{"text_format":"3","workbook":"xlsx","n_sheets":11,"sheets":["Table S1 Total DEGs","Table S2 UP&DN DEGs in WT & d1","Table S3 AgriGO WT FDR","Table S4 AgriGO, gProf & EXPath","Table S5 PlantMetGenMap","Table S6 MapMan","Table S7 Figure 4","Table S8 CropPAL2.0","Table S9 List of Interactors","Table S10 Primer Sequences","Table S11 NUE-Related genes"],"not_rendered":{"charts":2,"images":2},"read":"whole","date_system":"1900"}

{"sheet":"Table S1 Total DEGs","index":0,"n_rows":3419,"n_cols":13,"rows_kept":3419,"merged":[[1,0,1,12]]}
["Supplementary Table S1.  List of differentially expressed genes (DEGs) identified from nitrate-responsive leaf transcriptomes developed in RGA1 mutant (d1) of rice (Oryza sativa cv subsp. Japonica). Multiple testing corrections were performed using Benjamini Hochberg method and accordingly corrected p-values and associated FDR were calculated (https://tools.carbocation.com/FDR)."]
["RGA1"]
["ProbeName1","RAP-ID","MSU7","Fold_MT_T_1","Fold_MT_T_2","Fold_MT_T_3","Geomean_Fold_MT_T","p-value","Rank","Original P value","Critical Value","Benjamini-Hochberg Adjusted P value","Significant using an FDR of 0.05?"]
["Os03g0228200","Os03g0228200","LOC_Os03g12700.1",-4.143733,-3.9285488,-5.3314548,-4.467912,0.030063225,2721,0.030063225,0.0339192221391174,0.0443159116041896,"Yes"]
["Os03g0785900","Os03g0785900","LOC_Os03g57200.1",-5.2378464,-2.7752495,-4.363494,-4.12553,0.04118619,3347,0.04118619,0.0417227624033906,0.0493569788138631,"Yes"]
["Os05g0527000","Os05g0527000","LOC_Os05g45100.1",-5.5646753,-3.0739017,-3.2748318,-3.971136,0.015298123,1679,0.015298123,0.0209299426576913,0.0365460222471709,"Yes"]
["Os03g0724500","Os03g0724500","LOC_Os03g51459.1",-3.62632,-2.7455544,-3.927826,-3.4332333,0.024963766,2400,0.024963766,0.0299177262528047,0.0417206939275,"Yes"]
["Os02g0217900","Os02g0217900","LOC_Os02g12610.1",-3.0122457,-3.032814,-4.0724196,-3.372493,0.02239892,2233,0.02239892,0.0278359511343804,0.0402337967398119,"Yes"]
["Os05g0196100","Os05g0196100","LOC_Os05g10730.1",-2.6933718,-2.19106,-5.11706,-3.3338306,0.03426706,2978,0.03426706,0.0371229119920219,0.0461535183546004,"Yes"]
["Os11g0668300","Os11g0668300","LOC_Os11g44600.1",-3.3469706,-2.9456234,-3.6190925,-3.3038952,2.1533014E-3,300,0.002153301,3.73971578160059E-3,0.0287896343699999,"Yes"]
["Os11g0625900","Os11g0625900","LOC_Os11g40970.1",-3.6059833,-2.4057503,-3.8639174,-3.2918835,0.0039024267,541,3.902427E-3,0.00674395412615307,0.0289327813253234,"Yes"]
["Os02g0601500","Os02g0601500","LOC_Os02g38940.1",-2.7931871,-3.2444482,-3.2961369,-3.1112576,0.031450264,2812,0.031450264,0.0350536025928696,0.0448602449871977,"Yes"]
["osa-miR439d","osa-miR439d","No hit",-3.0226288,-2.7719636,-3.336492,-3.0436947,0.0022048887,307,0.002204889,0.00382697581650461,0.0288071979771986,"Yes"]
["Osa-miR439d","Os01g0540800","None",-3.0226288,-2.7719636,-3.336492,-3.0436947,0.0022048887,1604,0.014312604,0.0199950137122912,0.0357904330698254,"Yes"]
["Os02g0574100","Os02g0574100","LOC_Os02g36450.1",-2.6183925,-1.7326274,-4.7754655,-3.042162,0.03167637,2830,0.03167637,0.0352779855397656,0.0448953781166077,"Yes"]
["Os01g0224700","Os01g0224700","LOC_Os01g12490.1",-2.4644132,-2.6493292,-3.9241548,-3.0126324,0.0068369014,895,0.006836901,0.0111568187484417,0.030640011073743,"Yes"]
["Os04g0516800","Os04g0516800","None",-2.7185931,-2.4506474,-3.808693,-2.9926445,0.022631811,2251,0.022631811,0.0280603340812764,0.0403270519418036,"Yes"]
["osa-miR439b","osa-miR439b","No hit",-2.6877885,-2.572372,-3.637072,-2.965744,0.002502343,345,0.002502343,0.00430067314884068,0.0290924573130434,"Yes"]
["Os10g0527800","Os10g0527800","LOC_Os10g38360.1",-2.9860644,-2.827804,-3.0743976,-2.9627552,0.020938234,2120,0.020938234,0.0264273248566442,0.0396147436669811,"Yes"]
["Os11g0626700","Os11g0626700","LOC_Os11g41034.1",-3.4125934,-1.6375499,-3.8189254,-2.956356,0.018565321,1944,0.018565321,0.0242333582647718,0.0383052996558642,"Yes"]
["Os03g0188100","Os03g0188100","LOC_Os03g08900.1",-4.3382087,-1.397193,-2.9637876,-2.8997297,0.051718567,2345,0.023950057,0.0292321116928446,0.0409653213761194,"Yes"]
["Os04g0447700","Os04g0447700","LOC_Os04g37490.1",-3.4434242,-1.4303122,-3.6939101,-2.855882,0.04028277,3305,0.04028277,0.0411992021939666,0.0488878034704992,"Yes"]
["Os01g0176000","Os01g0176000","LOC_Os01g08090.1",-2.7439508,-1.815,-3.9210768,-2.8266761,0.034945346,3015,0.034945346,0.037584143605086,0.046489480200995,"Yes"]
["Os02g0774200","Os02g0774200","LOC_Os02g53410.1",-2.7145705,-2.0622706,-3.6439805,-2.8069408,0.004498857,457,0.003279163,0.00569683370730491,0.0287805750393873,"Yes"]
["GT_Os_A_Specific_0030221","Os09g0491772","LOC_Os09g31486.1",-3.3203473,-1.4099445,-3.6561174,-2.79547,0.023197968,2292,0.023197968,0.0285714285714285,0.0405964439999999,"Yes"]
["GT_Os_A_Specific_0004967","Os10g0344500","LOC_Os10g20380.1",-2.3599548,-1.8354197,-4.1170764,-2.7708168,0.019843388,2047,0.019843388,0.025517327349788,0.0388821833258427,"Yes"]
["Os07g0112700","Os07g0112700","LOC_Os07g02200.1",-1.9235129,-3.4807124,-2.8316011,-2.7452755,0.01037316,1262,0.01037316,0.0157317377212665,0.032968894421553,"Yes"]
["Os10g0573900","Os10g0573900","LOC_Os10g42320.1",-2.9602294,-1.994659,-3.2426958,-2.732528,0.043272376,2980,0.03427268,0.0371478434305659,0.0461301072080536,"Yes"]
["Os03g0580200","Os03g0580200","LOC_Os03g38350.1",-2.4041123,-1.5321474,-4.258031,-2.73143,0.026851153,2519,0.026851153,0.031401146846173,0.0427550514819372,"Yes"]
["Os03g0201000","Os03g0201000","LOC_Os03g10390.1",-2.8268533,-1.7237878,-3.6266394,-2.7257602,0.009295793,1164,0.009295793,0.0145100972326103,0.0320321526829896,"Yes"]
["Os12g0172400","Os12g0172400","LOC_Os12g07440.1",-2.8489914,-2.0529985,-3.1986141,-2.7002013,0.0033759214,471,3.375921E-3,0.00587135377711293,0.0287490852038216,"Yes"]
["Os02g0166200","Os02g0166200","None",-1.9576502,-2.6861215,-3.448987,-2.697586,0.008752103,1110,0.008752103,0.0138369483919222,0.0316258424621621,"Yes"]
["Os01g0949700","Os01g0949700","LOC_Os01g72120.1",-2.8143435,-1.9538116,-3.2970257,-2.6883936,0.00770284,107,0.000703359,0.00133383196210421,0.0263661023271028,"Yes"]
["Os03g0673400","Os03g0673400","LOC_Os03g47034.1",-3.2648225,-1.1239586,-3.6719565,-2.6869125,0.027017403,2531,0.027017403,0.031550735477437,0.0428158053864085,"Yes"]
["osa-miR169f","osa-miR169f","No hit",-2.6719027,-1.2483926,-4.0573373,-2.659211,0.03898503,3227,0.03898503,0.0402268760907504,0.0484564472668112,"Yes"]
["Os01g0944900","Os01g0944900","LOC_Os01g71690.2",-3.1246104,-1.2390199,-3.4454522,-2.6030276,0.023406455,2301,0.023406455,0.0286836200448765,0.0408010825749674,"Yes"]
["Os09g0400400","Os09g0400400","LOC_Os09g23560.1",-2.9070468,-1.9423254,-2.949696,-2.5996892,0.0075425766,968,7.542577E-3,0.0120668162552979,0.0312533846559917,"Yes"]
["Os11g0470200","Os11g0470500","LOC_Os11g28104.1",-2.2927456,-2.115384,-3.3385491,-2.5822263,0.0068849176,904,0.006884918,0.0112690102218898,0.0305480155951327,"Yes"]
["Os10g0515100","Os10g0515100","None",-3.151145,-1.0032434,-3.527679,-2.5606892,0.035005245,3019,0.035005245,0.037634006482174,0.0465074652848625,"Yes"]
["Os05g0555600","Os05g0555600","LOC_Os05g48200.1",-2.186586,-1.8475199,-3.5814557,-2.5385206,0.011719601,1388,0.011719601,0.0173024183495387,0.0338669449646974,"Yes"]
["GT_Os_A_Specific_0059739","Os04g0103601","None",-1.9121099,-2.0791526,-3.5941854,-2.5284827,0.026533399,2493,0.026533399,0.0310770381451009,0.0426897165619735,"Yes"]
["Os06g0697200","Os06g0697200","LOC_Os06g48210.1",-2.621616,-0.90741587,-4.0347695,-2.5212672,0.04229495,3397,0.04229495,0.0423460483669907,0.0499396657197527,"Yes"]
["osa-miR439g","osa-miR439g","No hit",-2.5856457,-2.1171727,-2.8015366,-2.5014517,0.0132631,1514,0.0132631,0.018873098977811,0.035137578665786,"Yes"]
["Os02g0668100","Os02g0668100","LOC_Os02g44780.1",-2.916657,-1.8931737,-2.5988054,-2.4695454,0.01900756,1972,0.01900756,0.0245823984043879,0.0386609143813387,"Yes"]
["Os04g0648200","Os04g0648200","LOC_Os04g55440.1",-2.332869,-2.4169617,-2.6373272,-2.462386,0.02444426,2374,0.02444426,0.0295936175517327,0.04129988494524,"Yes"]
["Os04g0127500","Os04g0127500","LOC_Os04g03830.1",-2.5308113,-1.683373,-3.1684322,-2.4608722,0.005307215,718,0.005307215,0.00895038643729743,0.029647965689415,"Yes"]
["Os02g0704000","Os02g0704000","LOC_Os02g47510.1",-3.695703,-1.7917366,-1.8582325,-2.4485574,0.03301652,2904,0.03301652,0.0362004487658937,0.0456023628512396,"Yes"]
["Os07g0613600","Os07g0613600","None",-2.2411532,-1.6089077,-3.3624873,-2.4041827,0.034600563,2998,0.034600563,0.0373722263774619,0.0462918139402935,"Yes"]
["Os07g0489200","Os07g0489200","LOC_Os07g30610.1",-1.8259091,-2.0510793,-3.1914287,-2.356139,0.023149835,2287,0.023149835,0.0285090999750685,0.0406007818911237,"Yes"]
["GT_Os_A_Specific_0009119","Os01g0949750","LOC_Os01g72130.1",-2.1855612,-1.585547,-3.2539163,-2.3416748,0.014449806,1620,0.014449806,0.0201944652206432,0.0357766493,"Yes"]
["Os06g0522300","Os06g0522300","LOC_Os06g33100.1",-2.307919,-1.732326,-2.9507022,-2.3303158,0.038180597,3181,0.038180597,0.0396534530042383,0.0481428401656711,"Yes"]
["Os07g0663000","Os07g0663000","LOC_Os07g46800.1",-2.1953635,-2.1471367,-2.5490427,-2.297181,0.014108674,1595,0.014108674,0.0198828222388431,0.0354795557454545,"Yes"]
["Os02g0606600","Os02g0606600","LOC_Os02g39384.1",-3.022078,-1.9335089,-1.8953881,-2.2836583,0.016379304,1773,0.016379304,0.0221017202692595,0.0370543645482233,"Yes"]
["Os03g0574900","Os03g0574900","LOC_Os03g37830.1",-2.4812584,-1.7444639,-2.623487,-2.2830698,0.020995475,2127,0.020995475,0.0265145848915482,0.039592313222849,"Yes"]
["Os08g0355400","Os08g0355400","LOC_Os08g26710.1",-2.8648367,-1.2788343,-2.7054224,-2.2830312,0.016375368,1989,0.019275432,0.0247943156320119,0.0388706675475113,"Yes"]
["Os08g0529100","Os08g0529100","LOC_Os08g41730.1",-1.9783139,-2.1137242,-2.702067,-2.2647016,0.036564194,3103,0.036564194,0.0386811269010221,0.0472636100979697,"Yes"]
["Os06g0133000","Os06g0133000","LOC_Os06g04200.1",-2.2350807,-2.047361,-2.5110621,-2.2645013,0.03029703,1743,0.016029885,0.0217277486910994,0.0368880486144578,"Yes"]
["Os12g0198200","Os12g0198200","LOC_Os12g09640.1",-1.926734,-2.098136,-2.75218,-2.2590168,0.016602933,1796,0.016602933,0.0223884318125155,0.0370792674070155,"Yes"]
["Os11g0210500","Os11g0210500","LOC_Os11g10510.1",-1.9112673,-1.3448238,-3.5028124,-2.2529678,0.030246826,1979,0.0191223,0.0246696584392919,0.0387567181910055,"Yes"]
["GT_Os_A_Specific_0074759","Os02g0594232","None",-2.803555,-1.8189764,-2.1055293,-2.242687,0.0048641586,669,0.004864159,0.00833956619296933,0.0291631416278026,"Yes"]
["Os02g0526400","Os02g0526400","LOC_Os02g32520.1",-2.8197026,-1.239203,-2.666244,-2.2417166,0.018265493,2763,0.0307548,0.0344427823485415,0.0446462188925081,"Yes"]
["Os12g0153200","Os12g0153200","LOC_Os12g05690.1",-3.0622468,-0.8112211,-2.848475,-2.2406476,0.04045276,3314,0.04045276,0.0413113936674146,0.0489607786240193,"Yes"]
["Os10g0580400","Os10g0580400","LOC_Os10g42960.1",-2.1943312,-1.6932983,-2.8290043,-2.238878,0.0072171562,936,0.007217156,0.0116679132385938,0.0309273640128205,"Yes"]
["Os09g0489500","Os09g0489500","LOC_Os09g31390.1",-1.5775728,-2.4516768,-2.679143,-2.236131,0.009260873,1157,0.009260873,0.0144228371977063,0.0321048933474503,"Yes"]
["Os12g0129700","Os12g0129700","LOC_Os12g03594.1",-1.6220412,-1.9532361,-3.1322904,-2.2358558,0.019020427,1973,0.019020427,0.0245948641236599,0.0386674772919412,"Yes"]
["Os01g0882400","Os01g0882400","LOC_Os01g65992.1",-2.1465664,-1.7320828,-2.8086457,-2.2290983,0.006882351,903,0.006882351,0.0112565445026178,0.0305704428139534,"Yes"]
["Os08g0378000","Os08g0378000","LOC_Os08g29020.1",-2.3389974,-2.0173855,-2.3249888,-2.227124,0.0043252152,2362,0.024291566,0.0294440289204687,0.0412504111879762,"Yes"]
["Os03g0725200","Os03g0725200","LOC_Os03g51530.1",-1.9634066,-1.20397,-3.5126243,-2.226667,0.04251344,3412,0.04251344,0.0425330341560708,0.0499769659554513,"Yes"]
["Os02g0193200","Os02g0193200","LOC_Os02g09980.1",-3.3431892,-1.345767,-1.976481,-2.2218125,0.03523641,3026,0.03523641,0.037721266517078,0.0467062923033707,"Yes"]
["Os12g0431100","Os12g0431100","LOC_Os12g24320.1",-1.9861317,-2.3493867,-2.3215303,-2.2190163,0.0013006555,196,0.001300656,0.00244328097731239,0.026616996,"Yes"]
["Os09g0343200","Os09g0343200","LOC_Os09g17329.1",-1.2856336,-2.1987796,-3.1137977,-2.1994035,0.028651554,2623,0.028651554,0.0326975816504612,0.043812955811666,"Yes"]
["Os01g0950700","Os01g0950700","LOC_Os01g72190.1",-1.6346903,-1.6683292,-3.2908883,-2.1979692,0.019894456,2050,0.019894456,0.025554724507604,0.0389252014712195,"Yes"]
["Os07g0507500","Os07g0507500","LOC_Os07g32406.1",-2.1422658,-1.7567353,-2.6903887,-2.1964633,0.020967428,2123,0.020967428,0.0264647220144602,0.0396139207291568,"Yes"]
["Os04g0608600","Os04g0608600","LOC_Os04g51920.1",-2.1668568,-1.3066573,-3.1091309,-2.194215,0.02541398,2426,0.02541398,0.0302418349538768,0.0420179199422918,"Yes"]
["Os07g0619200","Os07g0619200","LOC_Os07g42714.1",-1.9722838,-1.9933691,-2.6118183,-2.1924903,0.01496854,1659,0.01496854,0.0206806282722513,0.0361897612658227,"Yes"]
["GT_Os_A_Specific_0012371","Os08g0203350","LOC_Os08g10304.1",-2.3777423,-2.1017938,-2.089559,-2.1896985,0.005644743,764,0.005644743,0.00952380952380952,0.02963490075,"Yes"]
["Os09g0468300","Os09g0468300","LOC_Os09g29310.1",-1.8748002,-1.6296091,-3.0616145,-2.1886747,0.023656443,2315,0.023656443,0.0288581401146846,0.0409874699235421,"Yes"]
["Os01g0824800","Os01g0824800","LOC_Os01g60930.1",-1.3673825,-1.923778,-3.2725272,-2.187896,0.029346101,2663,0.029346101,0.0331962104213413,0.0442009805148328,"Yes"]
["Os04g0288500","Os04g0288500","LOC_Os04g22120.1",-1.4317441,-2.2284045,-2.9017081,-2.1872857,0.020216595,2076,0.020216595,0.0258788332086761,0.0390600975650289,"Yes"]
["Os04g0488100","Os04g0488100","LOC_Os04g41110.1",-2.9743857,-1.4833059,-2.09376,-2.1838171,0.024342299,2857,0.03208375,0.0356145599601097,0.0450430245887294,"Yes"]
["Os11g0118400","Os11g0118400","None",-2.9488912,-1.1133337,-2.4829464,-2.1817238,0.015349373,1685,0.015349373,0.0210047369733233,0.0365378843341246,"Yes"]
["Os07g0158400","Os07g0158400","LOC_Os07g06460.1",-2.638188,-1.1182961,-2.784037,-2.1801736,0.018043324,1896,0.018043324,0.0236350037397157,0.0381707661202531,"Yes"]
["Os02g0190300","Os02g0190300","LOC_Os02g09720.1",-2.7662983,-1.2267256,-2.5458026,-2.1796088,0.015161379,1669,0.015161379,0.0208052854649713,0.036436363792091,"Yes"]
["Os03g0582300","Os03g0582300","LOC_Os03g38600.1",-2.1275868,-2.1300793,-2.271779,-2.1764817,1.7664413E-3,256,0.001766441,0.00319122413363251,0.0276765423867187,"Yes"]
["Os01g0919800","Os01g0919800","LOC_Os01g69070.1",-2.6373754,-2.0561376,-1.8311172,-2.1748767,0.005022519,688,0.005022519,0.00857641485913737,0.0292809937630813,"Yes"]
["Os03g0194600","Os03g0194600","LOC_Os03g09880.1",-3.1227603,-1.4395933,-1.9565649,-2.172973,0.013582883,1545,0.013582883,0.019259536275243,0.0352627467398058,"Yes"]
["Os07g0258400","Os07g0258400","LOC_Os07g15460.1",-2.8008304,-1.1830883,-2.5255804,-2.169833,0.040666096,3325,0.040666096,0.0414485165794066,0.0490561537010526,"Yes"]
["Os03g0764900","Os03g0764900","LOC_Os03g55610.1",-2.5187798,-1.0631933,-2.9274387,-2.1698039,0.018364515,1930,0.018364515,0.0240588381949638,0.0381658392046632,"Yes"]
["Os04g0370900","Os04g0370900","LOC_Os04g30240.1",-1.7993226,-1.90487,-2.7999444,-2.1680458,0.004835847,665,0.004835847,0.00828970331588132,0.0291677929578947,"Yes"]
["Os11g0702900","Os11g0702900","None",-1.9296951,-2.593268,-1.9365559,-2.153173,0.014349618,1611,0.014349618,0.0200822737471952,0.0357270749832402,"Yes"]
["GT_Os_A_Specific_0012601","Os11g0182500","LOC_Os11g07980.1",-2.4593291,-0.9028058,-3.095667,-2.1526005,0.03403344,2579,0.027769873,0.0321490900024931,0.0431892053520744,"Yes"]
["Os10g0180800","Os10g0180800","LOC_Os10g10130.1",-2.3186798,-1.9470711,-2.178975,-2.148242,0.007718431,1150,9.176811E-3,0.0143355771628022,0.0320071208008695,"Yes"]
["GT_Os_A_Specific_0039208","Os02g0787600","LOC_Os02g54640.1",-1.1809778,-1.9265924,-3.3327956,-2.1467886,0.03828047,1455,0.012655307,0.0181376215407629,0.0348868978536082,"Yes"]
["Os11g0672200","Os11g0672200","LOC_Os11g44860.1",-1.3561845,-2.2777247,-2.786775,-2.140228,0.024694437,2386,0.024694437,0.0297432061829967,0.0415127354597653,"Yes"]
["Os07g0641700","Os07g0641700","LOC_Os07g44740.1",-2.9219046,-1.1820211,-2.2867737,-2.130233,0.020965876,1350,0.011299827,0.0168287210172026,0.0335730415533333,"Yes"]
["Os08g0437600","Os11g0116550","LOC_Os11g02464.1",-3.1882687,-1.2343278,-1.9438219,-2.1221395,0.036384333,3084,0.036384333,0.0384442782348541,0.0473208688920233,"Yes"]
["Os09g0454600","Os09g0454600","LOC_Os09g28160.1",-2.6013608,-1.117177,-2.6475968,-2.1220448,0.019620476,2019,0.019620476,0.025168287210172,0.0389785682199108,"Yes"]
["GT_Os_A_Specific_0064377","Os09g0349650","LOC_Os09g18020.1",-2.2025032,-1.6027946,-2.5507078,-2.1186686,0.033450726,2935,0.033450726,0.0365868860633258,0.0457140926698466,"Yes"]
["GT_Os_A_Specific_0065716","Os10g0202501","LOC_Os10g13505.1",-3.1908336,-1.12924,-2.017982,-2.1126852,0.024767848,2387,0.024767848,0.0297556719022687,0.0416187005982404,"Yes"]
["Os02g0702100","Os02g0702100","LOC_Os02g47370.1",-1.967062,-1.3827372,-2.9815435,-2.1104476,0.021563072,2168,0.021563072,0.0270256793817003,0.0398936724132841,"Yes"]
["Os02g0193100","Os02g0193100","LOC_Os02g09970.1",-1.4941144,-1.7668643,-3.0593114,-2.1067634,0.016056485,1747,0.016056485,0.0217776115681874,0.0368646601803091,"Yes"]
["GT_Os_A_Specific_0032734","Os01g0667000","LOC_Os01g47670.1",-1.9236019,-1.6282592,-2.763637,-2.1051662,0.009153528,1147,0.009153528,0.0142981800049862,0.0320094165719267,"Yes"]
["Os01g0701700","Os01g0701700","LOC_Os01g50610.1",-2.4433608,-1.3744836,-2.4542687,-2.0907042,0.01123111,1343,0.01123111,0.0167414609822986,0.0335428013477289,"Yes"]
["Os01g0597800","Os01g0597800","LOC_Os01g41430.1",-2.2773237,-1.5920234,-2.3827338,-2.084027,0.018799324,1962,0.018799324,0.0244577412116679,0.0384322571681957,"Yes"]
["Os01g0930400","Os01g0930400","LOC_Os01g70490.1",-1.6255407,-1.3011765,-3.3165197,-2.081079,0.032169297,2869,0.032169297,0.0357641485913737,0.0449742245615196,"Yes"]
["Os06g0542300","Os06g0542300","LOC_Os06g35060.1",-2.4716334,-1.5129199,-2.245071,-2.0765414,6.7771613E-3,888,0.006777161,0.0110695587135377,0.0306117035709459,"Yes"]
["Os03g0739700","Os03g0739700","LOC_Os03g52910.1",-1.3351564,-1.76439,-3.1287394,-2.0760953,0.020952605,2122,0.020952605,0.0264522562951882,0.0396045705254476,"Yes"]
["Os02g0782500","Os02g0782500","LOC_Os02g54140.1",-1.572566,-1.7843285,-2.8460598,-2.0676515,0.006725952,1431,0.012268221,0.0178384442782348,0.0343870261572327,"Yes"]
["GT_Os_A_Specific_0045494","Os06g0588800","LOC_Os06g38930.1",-1.9919915,-1.9122849,-2.2725353,-2.0589373,0.018440185,1936,0.018440185,0.0241336325105958,0.038204329563533,"Yes"]
["Os02g0632700","Os02g0632700","None",-1.0796757,-1.9353561,-3.150877,-2.0553029,0.03271376,2892,0.03271376,0.0360508601346297,0.0453716775103734,"Yes"]
["Os04g0286300","Os04g0286300","LOC_Os04g21820.1",-2.0143852,-1.6782846,-2.4649763,-2.0525486,0.010421272,1269,0.010421272,0.0158189977561705,0.0329391032245862,"Yes"]
["Os03g0797500","Os03g0797500","LOC_Os03g58320.1",-1.8174591,-2.501614,-1.8258915,-2.0483215,0.023510352,2307,0.023510352,0.0287584143605086,0.0408756054928478,"Yes"]
["Os04g0630800","Os04g0630800","LOC_Os04g53850.1",-1.9561038,-1.1703916,-3.0016646,-2.04272,0.041877527,3380,0.041877527,0.0421341311393667,0.0496954913600591,"Yes"]
["Os09g0112300","Os09g0112300","None",-2.1204162,-1.3422027,-2.6560187,-2.0395458,0.012451166,1439,0.012451166,0.0179381700324108,0.0347057865364836,"Yes"]
["Os06g0202300","Os06g0202300","LOC_Os06g10109.1",-1.8171129,-2.4735417,-1.7969394,-2.029198,0.0012027127,183,1.202713E-3,0.00228122662677636,0.0263611029672131,"Yes"]
["Os11g0657900","Os11g0657900","LOC_Os11g43700.1",-2.4454808,-0.87205744,-2.7663546,-2.0279644,0.03101942,2783,0.03101942,0.0346920967339815,0.0447067530075458,"Yes"]
["Os07g0642900","Os07g0642900","LOC_Os07g44840.1",-1.9356151,-1.7510533,-2.3938746,-2.0268476,0.036035,3072,0.036035,0.0382946896035901,0.0470496044921874,"Yes"]
["Os02g0181900","Os02g0181900","LOC_Os02g08490.1",-2.2933235,-1.3144498,-2.4691358,-2.0256364,0.028585559,2617,0.028585559,0.0326227873348292,0.0438122572216278,"Yes"]
["Os11g0490900","Os11g0490900","LOC_Os11g29870.1",-1.6925755,-1.5305948,-2.8444304,-2.0225337,0.0086671375,1095,0.008667138,0.0136499626028421,0.0317478452219178,"Yes"]
["Os02g0663800","Os02g0663800","LOC_Os02g44470.1",-2.0080833,-1.7230949,-2.3254566,-2.0188782,0.03600738,3069,0.03600738,0.0382572924457741,0.0470594985923753,"Yes"]
["Os01g0965900","Os01g0965900","LOC_Os01g73500.1",-1.9928093,-1.7526102,-2.288988,-2.0114691,0.013096972,1499,0.013096972,0.0186861131887309,0.0350446662388258,"Yes"]
["Os03g0168200","Os03g0168200","LOC_Os03g07190.1",-1.8777952,-1.2829304,-2.8736472,-2.0114577,0.021738952,2184,0.021738952,0.0272251308900523,0.0399244214615384,"Yes"]
["Os01g0117200","Os01g0117200","LOC_Os01g02780.1",-1.7611799,-2.1751633,-2.0903463,-2.0088966,0.00032656314,51,0.000326563,0.000635751682872101,0.0256832194705882,"Yes"]
["Os08g0190100","Os08g0190100","LOC_Os08g09080.1",-1.6012855,-2.14917,-2.2740169,-2.0081575,0.02644387,2488,0.02644387,0.0310147095487409,0.0426311746663987,"Yes"]
["Os04g0587300","Os04g0587300","LOC_Os04g49739.1",-2.8473125,-1.2117271,-1.9629998,-2.0073464,0.038043275,3172,0.038043275,0.0395412615307903,0.0481057931982976,"Yes"]
["Os12g0194900","Os12g0194900","LOC_Os12g09300.1",-1.993547,-1.3476787,-2.6727748,-2.0046668,0.032118093,2861,0.032118093,0.0356644228371977,0.0450281967923802,"Yes"]
["Os10g0362700","Os10g0362700","LOC_Os10g21860.1",-1.6327605,-2.5587983,-1.8171358,-2.0028982,0.012112041,1419,0.012112041,0.0176888556469708,0.0342363611353065,"Yes"]
["Os11g0128600","Os11g0128600","LOC_Os11g03450.1",-1.550273,-1.9582772,-2.487544,-1.9986981,0.015527189,1701,0.015527189,0.0212041884816753,0.0366134950493827,"Yes"]
["Os11g0649700","Os11g0649700","LOC_Os11g42970.1",-2.4210663,-1.5950327,-1.9764423,-1.9975138,0.008700392,1102,0.008700392,0.0137372226377462,0.0316672162540834,"Yes"]
["Os06g0293500","Os06g0293500","LOC_Os06g18960.1",-2.2480302,-2.7838206,-0.94934654,-1.9937325,0.028737256,2628,0.028737256,0.0327599102468212,0.0438604009954337,"Yes"]
["Os10g0462900","Os10g0462900","LOC_Os10g32550.1",-2.0664682,-1.3681774,-2.5426521,-1.9924326,0.005811041,917,0.0070014,0.0114310645724258,0.0306244442748091,"Yes"]
["Os02g0317700","Os02g0317700","LOC_Os02g21269.1",-2.597405,-1.1492352,-2.2260132,-1.9908844,0.028733535,2627,0.028733535,0.0327474445275492,0.0438714156395127,"Yes"]
["Os04g0452700","Os04g0452700","LOC_Os04g37980.1",-1.744977,-1.91575,-2.3048456,-1.9885241,0.007674552,831,0.006387143,0.0103590127150336,0.0308289176570397,"Yes"]
["Os01g0184100","Os01g0184100","LOC_Os01g08860.1",-1.8616467,-1.6072979,-2.4914885,-1.986811,0.004842922,666,0.004842922,0.00830216903515332,0.0291666068198198,"Yes"]
["Os12g0456000","Os12g0456000","LOC_Os12g27050.1",-1.9199634,-1.4639459,-2.5722904,-1.9853998,0.017429695,1860,0.017429695,0.0231862378459237,0.0375862938951612,"Yes"]
["Os07g0186000","Os07g0186000","LOC_Os07g08840.1",-1.3652182,-2.465886,-2.0755415,-1.968882,0.012133717,3248,0.039379366,0.0404886561954624,0.0486301222370689,"Yes"]
["GT_Os_A_Specific_0565999","Os06g0474800","LOC_Os06g28050.1",-1.4440951,-2.2198262,-2.2235417,-1.9624877,0.026525207,2492,0.026525207,0.0310645724258289,0.0426936618286516,"Yes"]
["Os02g0761200","Os02g0761200","LOC_Os02g52370.1",-2.3648329,-0.861351,-2.6465092,-1.9575644,0.029348297,2664,0.029348297,0.0332086761406133,0.044187694920045,"Yes"]
["GT_Os_A_Specific_0210906","Os06g0107750","LOC_Os06g01840.1",-1.6419344,-2.1372662,-2.0808678,-1.9533561,0.0010396609,153,0.001039661,0.0019072550486163,0.0272554266078431,"Yes"]
["Os02g0134300","Os02g0134300","LOC_Os02g04160.1",-1.5566368,-1.4753742,-2.8248005,-1.9522705,0.021088032,2133,0.021088032,0.0265893792071802,0.0396549912573839,"Yes"]
["Os08g0364900","Os08g0364900","LOC_Os08g27720.1",-2.1059952,-1.4190264,-2.3241844,-1.9497353,0.021317896,2146,0.021317896,0.0267514335577162,0.0398443992805219,"Yes"]
["Os02g0119600","Os02g0119600","LOC_Os02g02730.1",-1.948586,-1.6336536,-2.2582216,-1.9468204,0.0033449803,466,3.34498E-3,0.00580902518075293,0.0287912334334763,"Yes"]
["osa-miR439c","osa-miR439c","No hit",-1.8543181,-1.8814988,-2.0977426,-1.9445199,0.03333309,2925,0.03333309,0.0364622288706058,0.0457090680307692,"Yes"]
["Os07g0152700","Os07g0152700","LOC_Os07g05800.1",-2.3355908,-1.146913,-2.3250613,-1.935855,0.009276305,1159,0.009276305,0.0144477686362503,0.0321028984943917,"Yes"]
["Os02g0634600","Os02g0634600","LOC_Os02g42300.1",-2.4316525,-1.2727108,-2.1010017,-1.9351217,0.015822051,1728,0.015822051,0.0215407629020194,0.0367258371302083,"Yes"]
["Os06g0202400","Os06g0202400","None",-1.6386261,-1.9114819,-2.251893,-1.9340004,4.700075E-4,79,4.70008E-4,0.000984791822488157,0.0238633175696202,"Yes"]
["GT_Os_A_Specific_0253467","Os03g0655000","None",-1.8327799,-1.7438188,-2.219212,-1.9319369,0.014393328,1618,0.014393328,0.0201695337820992,0.0356808644054388,"Yes"]
["Os02g0803600","Os02g0803600","LOC_Os02g55990.1",-1.4400301,-1.985775,-2.3677387,-1.9311813,0.013560364,1542,0.013560364,0.019222139117427,0.035272775618677,"Yes"]
["Os09g0484900","Os09g0484900","LOC_Os09g31130.1",-2.3319125,-1.1514149,-2.309422,-1.9309164,0.013341184,1994,0.019317005,0.0248566442283719,0.0388568239994984,"Yes"]
["GT_Os_A_Specific_0041334","Os12g0609900","LOC_Os12g41630.1",-1.630033,-1.5173287,-2.640842,-1.9294013,0.022400783,2234,0.022400783,0.0278484168536524,0.0402191318769024,"Yes"]
["Os08g0494200","Os08g0494200","LOC_Os08g38610.1",-2.35174,-1.0802355,-2.3460612,-1.9260122,0.014626355,1636,0.014626355,0.0203939167289952,0.035859602631418,"Yes"]
["Os01g0639600","Os01g0639600","LOC_Os01g45250.1",-1.5841007,-1.4947453,-2.6829052,-1.9205837,0.027674822,2572,0.027674822,0.0320618299675891,0.0431585190676516,"Yes"]
["Os07g0659300","Os07g0659300","LOC_Os07g46510.1",-1.5211763,-1.6531606,-2.5868874,-1.9204081,0.015487444,1699,0.015487444,0.0211792570431313,0.0365627650876986,"Yes"]
["GT_Os_A_Specific_0005647","Os04g0538000","LOC_Os04g45480.1",-1.9583974,-2.3228536,-1.4556727,-1.9123079,0.009496962,1351,0.011299839,0.0168411867364746,0.0335482266683937,"Yes"]
["Os05g0557400","Os05g0557400","LOC_Os05g48360.1",-1.9480658,-1.7100263,-2.074977,-1.911023,0.0061360444,813,0.006136044,0.0101346297681376,0.0302726598819188,"Yes"]
["Os05g0530400","Os05g0530400","LOC_Os05g45410.1",-1.3634305,-1.9828072,-2.3783178,-1.9081851,0.005463593,1817,0.01688111,0.0226502119172276,0.0372647948321408,"Yes"]
["GT_Os_A_Specific_0123506","Os02g0159700","LOC_Os02g06480.1",-1.985569,-1.0114856,-2.7128143,-1.9032897,0.039428297,3254,0.039428297,0.0405634505110944,0.0486007680599262,"Yes"]
["Os01g0326300","Os01g0326300","LOC_Os01g22249.1",-1.4192133,-1.905613,-2.3685093,-1.8977785,0.027463354,2557,0.027463354,0.0318748441785091,0.04307998157763,"Yes"]
["Os01g0297200","Os01g0297200","LOC_Os01g19260.1",-1.7623816,-1.792057,-2.1213512,-1.89193,0.028758744,2629,0.028758744,0.0327723759660932,0.0438765014012932,"Yes"]
["Os05g0197300","Os05g0197300","LOC_Os05g10840.1",-1.6909585,-1.3159008,-2.6682286,-1.891696,0.03973542,3274,0.03973542,0.0408127648965345,0.0486801373304825,"Yes"]
["Os03g0189400","Os03g0189400","LOC_Os03g08999.1",-1.8213892,-0.9576349,-2.8905191,-1.8898478,0.037808895,3158,0.037808895,0.0393667414609823,0.0480213672720076,"Yes"]
["Os08g0163300","Os08g0163300","LOC_Os08g06620.1",-1.7960658,-1.1962461,-2.6761432,-1.889485,0.014900908,1656,0.014900908,0.0206432311144353,0.0360915108623188,"Yes"]
["Os03g0646800","Os03g0646800","LOC_Os03g44484.1",-2.0522628,-0.975502,-2.6022935,-1.8766861,0.023220655,2293,0.023220655,0.0285838942907005,0.0406184244243349,"Yes"]
["Os10g0491000","Os10g0491000","LOC_Os10g34930.1",-1.7200451,-0.95164394,-2.9538894,-1.8751928,0.031338207,2806,0.031338207,0.0349788082772375,0.0447959901200997,"Yes"]
["Os04g0650800","Os04g0650800","LOC_Os04g55720.1",-2.057685,-1.0344105,-2.516265,-1.8694534,0.01610381,2164,0.021521654,0.0269758165046123,0.0398906442670979,"Yes"]
["Os12g0552300","Os12g0552300","LOC_Os12g36620.1",-1.6374221,-1.2502522,-2.708682,-1.8654522,0.038589843,3202,0.038589843,0.0399152331089503,0.0483397439953154,"Yes"]
["osa-miR416","osa-miR416","No hit",-1.5627584,-2.126596,-1.9067588,-1.8653711,0.04061544,3323,0.04061544,0.0414235851408626,0.0490245350105326,"Yes"]
["Os10g0573800","Os10g0573800","LOC_Os10g42299.1",-2.5429277,-0.78998756,-2.2602582,-1.8643912,0.032050833,2854,0.032050833,0.0355771628022936,0.0450441104285213,"Yes"]
["Os01g0864500","Os01g0864500","LOC_Os01g64470.1",-1.0941391,-1.592144,-2.894905,-1.860396,0.028591918,2618,0.028591918,0.0326352530541012,0.0438052647433155,"Yes"]
["Os01g0246700","Os01g0246700","LOC_Os01g14440.1",-2.5085325,-0.9103708,-2.154171,-1.8576914,0.019121585,1978,0.019121585,0.0246571927200199,0.0387748622017189,"Yes"]
["Os07g0513200","Os07g0513200","LOC_Os07g32900.1",-1.8862848,-1.6267304,-2.0563993,-1.8564715,0.002679501,2505,0.026725642,0.0312266267763649,0.0427930339568862,"Yes"]
["osa-miR397a","osa-miR397a","No hit",-1.6732235,-1.8982811,-1.9706259,-1.8473768,0.010816582,1303,0.010816582,0.0162428322114186,0.0332964776684574,"Yes"]
["Os01g0933200","Os01g0933200","LOC_Os01g70710.1",-1.656322,-1.3382668,-2.5426798,-1.8457562,0.023068488,2280,0.023068488,0.0284218399401645,0.0405823269157894,"Yes"]
["Os03g0195100","Os03g0195100","LOC_Os03g09910.1",-1.587533,-1.2377572,-2.7107658,-1.845352,0.041539684,3362,0.041539684,0.0419097481924707,0.0495584986686496,"Yes"]
["Os06g0115300","Os06g0115300","LOC_Os06g02490.1",-1.820055,-1.6288519,-2.071209,-1.8400387,0.004297512,590,0.004297512,0.00735477437048117,0.0292157976813559,"Yes"]
["Os02g0681100","Os02g0681100","LOC_Os02g45700.1",-1.5852532,-1.8436584,-2.0854654,-1.8381257,1.1446365E-3,168,1.144637E-3,0.00209424083769633,0.027328208375,"Yes"]
["GT_Os_A_Specific_0000357","Os01g0955500","LOC_Os01g72550.1",-1.686305,-1.9081497,-1.8981361,-1.8308636,0.004164954,569,0.004164954,0.00709299426576913,0.0293596317996485,"Yes"]
["Os06g0551800","Os06g0551800","LOC_Os06g35850.1",-1.9009805,-2.13207,-1.4542875,-1.8291126,0.016258022,1761,0.016258022,0.0219521316379955,0.0370306225110732,"Yes"]
["Os10g0209700","Os10g0209700","LOC_Os10g14870.1",-1.4918346,-1.5124674,-2.4823728,-1.8288916,0.020757658,2112,0.020757658,0.0263275991024682,0.0394218590142045,"Yes"]
["Os06g0667000","Os06g0667000","LOC_Os06g45630.1",-0.9320326,-1.7183084,-2.8336678,-1.8280029,0.034586933,2997,0.034586933,0.0373597606581899,0.0462890184394394,"Yes"]
["Os05g0460000","Os05g0460000","LOC_Os05g38530.1",-1.6404667,-1.3958368,-2.4365573,-1.8242869,0.007036401,918,0.007036401,0.0114435302916978,0.0307440135196078,"Yes"]
["Os03g0841700","Os03g0841700","LOC_Os03g62490.1",-1.7841411,-1.0343533,-2.6479797,-1.822158,0.022049734,1769,0.016324107,0.0220518573921715,0.037012997838892,"Yes"]
["Os05g0439000","Os05g0439000","LOC_Os05g36310.1",-1.7833958,-1.0823817,-2.5990372,-1.8216048,0.01925539,1988,0.01925539,0.0247818499127399,0.0388497833450704,"Yes"]
["Os07g0613300","Os07g0613300","LOC_Os07g42180.1",-1.8026471,-2.1526365,-1.5012379,-1.8188405,0.0041403873,567,0.004140387,0.00706806282722513,0.0292894043333333,"Yes"]
["Os03g0341000","Os03g0341000","LOC_Os03g22170.1",-2.3262634,-1.4248676,-1.7000475,-1.8170595,0.00767233,987,0.00767233,0.0123036649214659,0.0311790431914893,"Yes"]
["Os01g0845000","Os01g0845000","None",-0.9645834,-1.6609502,-2.8175802,-1.8143712,0.037921984,3168,0.037921984,0.0394913986537023,0.0480129664848484,"Yes"]
["GT_Os_A_Specific_0097659","Os12g0134300","LOC_Os12g04060.1",-1.6290069,-1.9280539,-1.8716922,-1.8095843,0.00012882044,22,1.2882E-4,2.74245823984043E-4,0.0234862281818181,"Yes"]
["Os04g0600300","Os04g0600300","LOC_Os04g51160.1",-1.5847664,-2.0694242,-1.7692146,-1.8078017,0.02548616,2986,0.034431458,0.0372226377461979,0.0462506959269926,"Yes"]
["Os03g0729000","Os03g0729000","LOC_Os03g51920.1",-1.9758234,-0.9937477,-2.452353,-1.8073081,0.029598314,2680,0.029598314,0.0334081276489653,0.0442980736768656,"Yes"]
["Os08g0173300","Os08g0173300","LOC_Os08g07660.1",-2.687326,-0.7743144,-1.9570441,-1.8062282,0.03875349,3213,0.03875349,0.0400523560209424,0.0483785398039215,"Yes"]
["Os01g0771100","Os01g0771100","LOC_Os01g56460.1",-1.746563,-1.4268465,-2.221933,-1.7984475,0.0032833244,459,0.003283324,0.00572176514584891,0.0286915306405228,"Yes"]
["Os06g0160800","Os06g0160800","LOC_Os06g06570.1",-0.9600148,-1.8247738,-2.6009488,-1.7952458,0.023085024,2282,0.023085024,0.0284467713787085,0.040575824392638,"Yes"]
["Os03g0829200","Os03g0829200","LOC_Os03g61360.1",-1.8091564,-0.88426685,-2.686718,-1.7933804,0.033887934,2957,0.033887934,0.0368611318873099,0.0459670284998309,"Yes"]
["Os02g0806400","Os02g0806400","LOC_Os02g56250.1",-1.0000529,-1.9274015,-2.4361825,-1.787879,0.014052855,1583,0.014052855,0.0197332336075791,0.035607076061276,"Yes"]
["Os11g0703000","Os11g0703000","LOC_Os11g47670.1",-2.3782387,-0.97648096,-2.0061116,-1.7869438,0.03136091,2808,0.03136091,0.0350037397157816,0.0447965135363247,"Yes"]
["Os01g0855200","Os01g0855200","LOC_Os01g63620.1",-1.7798781,-1.7002325,-1.8804135,-1.7868414,0.0013658522,203,0.001365852,0.0025305410122164,0.0269873515862068,"Yes"]
["Os03g0143400","Os03g0143400","LOC_Os03g04970.1",-1.8168755,-1.3427448,-2.1775208,-1.779047,0.019587012,2014,0.019587012,0.025105958613812,0.0390086917239324,"Yes"]
["Os03g0218400","Os03g0218400","LOC_Os03g11900.1",-1.5859556,-0.83422947,-2.8937387,-1.771308,0.03967286,3270,0.03967286,0.0407629020194465,0.0486629484587156,"Yes"]
["Os09g0272900","Os09g0272900","LOC_Os09g10054.1",-2.405837,-1.8359103,-1.0684834,-1.7700769,0.022708511,2804,0.031328175,0.0349538768386935,0.044813591271398,"Yes"]
["Os08g0448100","Os08g0448100","LOC_Os08g34800.1",-2.2069907,-1.056406,-2.0325103,-1.7653023,0.026259383,2479,0.026259383,0.0309025180752929,0.0424874486538927,"Yes"]
["Os04g0598900","Os04g0598900","LOC_Os04g51040.1",-1.755033,-1.2594409,-2.2770472,-1.7638403,0.005077203,694,0.005077203,0.00865120917476938,0.0293438922665706,"Yes"]
["Os02g0802500","Os02g0802500","LOC_Os02g55890.1",-1.2482314,-1.5373135,-2.5037804,-1.7631084,0.028706359,2610,0.028475067,0.0325355272999252,0.0437599592862069,"Yes"]
["Os05g0130300","Os05g0130300","LOC_Os05g03960.1",-1.697567,-1.4204407,-2.1591377,-1.7590485,0.0024749099,341,0.00247491,0.00425081027175268,0.0291110381524926,"Yes"]
["Os01g0864200","Os01g0864200","LOC_Os01g64440.1",-2.4486222,-1.1463461,-1.6667414,-1.7539033,0.016514225,1782,0.016514225,0.0222139117427075,0.0371709071127946,"Yes"]
["GT_Os_A_Specific_0017186","Os01g0959750","None",-0.90330553,-1.8429885,-2.5077872,-1.7513604,0.023590947,2310,0.023590947,0.0287958115183246,0.0409624625181818,"Yes"]
["GT_Os_A_Specific_0118442","Os01g0952800","LOC_Os01g72370.1",-0.74645805,-2.1765685,-2.329349,-1.7507919,0.033693828,2946,0.033693828,0.0367240089753178,0.0458743870020366,"Yes"]
["Os08g0320500","Os08g0320500","None",-1.5875359,-1.5167708,-2.112762,-1.7390229,0.002733998,386,0.002733998,0.00481176763899277,0.0284094973523316,"Yes"]
["Os07g0150700","Os07g0150700","LOC_Os07g05620.1",-2.1863828,-0.94268703,-2.0851002,-1.7380567,0.030124096,2724,0.030124096,0.0339566192969334,0.0443567360704845,"Yes"]
["Os01g0364800","Os01g0364800","LOC_Os01g26270.1",-1.1429095,-2.3067603,-1.7598348,-1.7365016,0.008860976,1119,0.008860976,0.0139491398653702,0.0317617289865951,"Yes"]
["Os04g0600000","Os04g0600000","LOC_Os04g51130.1",-1.4985952,-1.0984001,-2.6055841,-1.7341932,0.019619776,2018,0.019619776,0.0251558214909,0.0389964923369672,"Yes"]
["Os08g0132100","Os08g0132100","LOC_Os08g03780.1",-1.9319463,-1.4558125,-1.8082871,-1.7320153,0.0027779534,395,0.002777953,0.00492395911244078,0.0282085303367088,"Yes"]
["Os11g0153500","Os11g0153500","LOC_Os11g05550.1",-1.7532506,-1.314714,-2.1204805,-1.7294817,2.1789023E-3,305,0.002178902,3.8020443779606E-3,0.0286543472852459,"Yes"]
["Os01g0178900","Os01g0178900","LOC_Os01g08370.1",-1.9089837,-1.2671609,-1.9960775,-1.724074,0.0017408748,249,1.740875E-3,0.00310396409872849,0.0280427695783132,"Yes"]
["Os03g0822700","Os03g0822700","LOC_Os03g60780.1",-1.8267221,-1.5300636,-1.8067007,-1.7211622,0.02631679,2481,0.02631679,0.0309274495138369,0.0425460075332527,"Yes"]
["Os07g0124100","Os07g0124100","LOC_Os07g03200.1",-1.261322,-1.3802929,-2.5184274,-1.7200141,0.015765758,2981,0.03430269,0.0371603091498379,0.0461550116034887,"Yes"]
["Os05g0576700","Os05g0576700","LOC_Os05g50110.1",-1.6639509,-2.139576,-1.3544674,-1.7193314,0.006613765,865,0.006613765,0.0107828471702817,0.0306679900751445,"Yes"]
["Os04g0365100","Os04g0365100","LOC_Os04g29580.1",-1.6850986,-2.3770375,-1.0955806,-1.7192389,0.014865856,1652,0.014865856,0.0205933682373472,0.0360937944406779,"Yes"]
["Os05g0194900","Os05g0194900","LOC_Os05g10650.1",-1.516242,-1.7268262,-1.9066205,-1.7165629,0.00060670986,95,6.0671E-4,0.00118424333084018,0.0256159348421052,"Yes"]
["Os01g0904300","Os01g0904300","LOC_Os01g67730.1",-1.2095985,-1.8691463,-2.0679102,-1.7155517,0.011143136,1339,0.011143136,0.0166915981052106,0.033379476098581,"Yes"]
["Os10g0562100","Os10g0562100","LOC_Os10g41260.1",-1.9089122,-1.5934901,-1.642004,-1.7148021,0.025679374,2448,0.025679374,0.0305160807778608,0.0420751507818627,"Yes"]
["Os04g0105500","Os04g0105500","LOC_Os04g01530.1",-2.3690348,-0.95806074,-1.8146391,-1.7139115,0.01847897,1938,0.01847897,0.0241585639491398,0.0382451747523219,"Yes"]
["Os04g0359700","Os04g0359700","LOC_Os04g29030.1",-1.3071151,-1.8886657,-1.9426932,-1.7128247,0.029121831,2650,0.029121831,0.0330341560708052,0.0440783638267924,"Yes"]
["Os08g0107800","Os08g0107800","LOC_Os08g01650.1",-2.212453,-1.5216026,-1.3942747,-1.7094434,0.010546977,1286,0.010546977,0.0160309149837945,0.0328957424160186,"Yes"]
["Os02g0528900","Os02g0528900","LOC_Os02g32690.1",-2.4859023,-0.83145905,-1.7964578,-1.7046064,0.035426185,3039,0.035426185,0.037883320867614,0.0467569687512339,"Yes"]
["Os01g0675800","Os01g0675800","LOC_Os01g48446.1",-1.617722,-1.4352221,-2.0581120999999998,-1.7036854,0.012775336,1470,0.012775336,0.0183246073298429,0.0348584168,"Yes"]
["Os03g0256800","Os03g0256800","LOC_Os03g15180.1",-1.7915688,-0.9716692,-2.3383484,-1.7005287,0.03270573,2891,0.03270573,0.0360383944153577,0.0453762307263922,"Yes"]
["Os07g0604700","Os07g0604700","LOC_Os07g41350.1",-1.7929826,-1.5437937,-1.7623911,-1.6997224,0.010834529,1309,0.010834529,0.0163176265270506,0.0331988508930481,"Yes"]
["osa-miR169m","osa-miR169m","No hit",-1.4546099,-0.85539675,-2.7862082,-1.6987382,0.038842596,3220,0.038842596,0.0401396160558464,0.048384364147826,"Yes"]
["osa-miR439e","osa-miR439e","No hit",-1.5339184,-1.5464945,-2.01301,-1.6978077,0.0143126035,1605,0.014312604,0.0200074794315632,0.0357681337345794,"Yes"]
["Os05g0495700","Os05g0495700","LOC_Os05g41590.1",-1.6338778,-1.2437172,-2.2130299,-1.696875,0.04186682,3378,0.04186682,0.0421091997008227,0.0497122010124333,"Yes"]
["Os03g0183200","Os03g0183200","LOC_Os03g08490.1",-1.6174726,-1.3819313,-2.0820131,-1.6938057,0.041602265,3369,0.041602265,0.0419970082273747,0.049530034109528,"Yes"]
["Os08g0550000","Os08g0550000","LOC_Os08g43630.1",-1.3073955,-1.5603108,-2.193987,-1.6872311,0.0044805496,619,0.00448055,7.71628022936923E-3,0.0290330953957996,"Yes"]
["Os04g0598600","Os04g0598600","None",-1.5439687,-1.113267,-2.403059,-1.6867648,0.015593866,1708,0.015593866,0.0212914485165794,0.0366200213852459,"Yes"]
["Os10g0190900","Os10g0190900","LOC_Os10g11354.1",-1.9968376,-0.84627247,-2.2167072,-1.6866058,0.029909214,2712,0.029909214,0.0338070306656694,0.0442351981393805,"Yes"]
["Os11g0278300","Os11g0278300","LOC_Os11g17720.1",-1.1876864,-2.105659,-1.7585745,-1.6839733,0.022245897,2221,0.022245897,0.0276863625031164,0.04017482794552,"Yes"]
["Os01g0667100","Os01g0667100","LOC_Os01g47680.1",-2.3781648,-1.6478772,-1.0203543,-1.6821321,0.015539043,1702,0.015539043,0.0212166542009473,0.0366199186092832,"Yes"]
["Os03g0687700","Os03g0687700","LOC_Os03g48220.1",-2.3723836,-1.0223002,-1.6508117,-1.6818318,0.023482038,2306,0.023482038,0.0287459486412366,0.0408440825750216,"Yes"]
["Os05g0490000","Os05g0490000","LOC_Os05g41100.1",-1.9753141,-1.0372353,-2.0123127,-1.674954,0.010851937,1313,0.010851937,0.0163674894041386,0.0331508905613099,"Yes"]
["Os11g0242200","Os11g0242200","LOC_Os11g13820.1",-1.5366063,-1.5423951,-1.9351683,-1.6713899,0.0022470835,315,0.002247084,0.00392670157068062,0.0286128695999999,"Yes"]
["Os01g0778100","Os01g0778100","LOC_Os01g57020.1",-2.0036817,-1.3659449,-1.6444864,-1.671371,0.025960369,2466,0.025960369,0.0307404637247569,0.0422250770717761,"Yes"]
["Os01g0748200","Os01g0748200","LOC_Os01g54440.1",-1.7273602,-1.3791342,-1.8875973,-1.6646973,0.0021686573,2152,0.021373263,0.0268262278733482,0.0398365045971189,"Yes"]
["Os06g0514800","Os06g0514800","LOC_Os06g32240.1",-1.7052612,-2.2075772,-1.0780239,-1.6636208,0.033953357,2963,0.033953357,0.0369359262029419,0.0459625092564967,"Yes"]
["Os06g0514800","Os06g0513050","LOC_Os06g31890.1",-1.7052612,-2.2075772,-1.0780239,-1.6636208,0.033953357,2964,0.033953357,0.0369483919222139,0.0459470023370445,"Yes"]
["Os08g0174500","Os05g0463800","LOC_Os05g38820.4",-1.763938,-1.6373711,-1.5883536,-1.6632209,4.274294e-05,12,4.27429E-5,0.000149588631264023,0.014286814325,"Yes"]
["Os08g0174500","Os08g0174500","LOC_Os08g07740.1",-1.763938,-1.6373711,-1.5883536,-1.6632209,4.274294e-05,13,4.27429E-5,1.62054350536025E-4,0.0131878286076923,"Yes"]
["Os01g0956200","Os01g0956200","LOC_Os01g72610.1",-1.9531269,-0.9511423,-2.079791,-1.6613535,0.017100343,1835,0.017100343,0.0228745948641236,0.0373784609117166,"Yes"]
["Os08g0452900","Os08g0452900","LOC_Os08g35160.1",-0.85407066,-1.6888847,-2.4347272,-1.6592275,0.022842744,2264,0.022842744,0.0282223884318125,0.0404691900106007,"Yes"]
["Os01g0877900","Os01g0877900","LOC_Os01g65620.1",-1.2018809,-1.8193369,-1.9558506,-1.6590228,0.0025158823,348,0.002515882,0.00433807030665669,0.0289977089137931,"Yes"]
["Os01g0828300","Os01g0828300","LOC_Os01g61250.1",-1.9178467,-1.1174674,-1.939805,-1.658373,0.00450057,622,0.00450057,0.00775367738718524,0.0290221644212218,"Yes"]
["Os02g0740300","Os02g0740300","LOC_Os02g50680.1",-1.8146181,-1.3289347,-1.8298397,-1.6577975,0.007293587,943,0.007293587,0.0117551732734978,0.0310228817147401,"Yes"]
["Os12g0438300","Os12g0438300","LOC_Os12g25170.1",-1.5756707,-1.9056702,-1.4918852,-1.657742,0.007386407,958,0.007386407,0.0119421590625779,0.030925760414405,"Yes"]
["GT_Os_A_Specific_0009397","Os01g0889601","None",-2.1339507,-0.8607192,-1.9635162,-1.6527287,0.016553517,1786,0.016553517,0.0222637746197955,0.0371758996007838,"Yes"]
["Os08g0438400","Os08g0438400","LOC_Os08g34010.1",-1.6039109,-1.4963751,-1.8574767,-1.6525875,0.027460046,2556,0.027460046,0.0318623784592371,0.043091644955399,"Yes"]
["Os04g0500600","Os04g0500600","LOC_Os04g42240.1",-1.1047478,-1.3308,-2.515345,-1.6502976,0.027323293,2549,0.027323293,0.031775118424333,0.042994793339741,"Yes"]
["GT_Os_A_Specific_0333050","Os09g0431050","None",-1.0136232,-1.6687441,-2.2638922,-1.6487532,0.029332273,2660,0.029332273,0.0331588132635253,0.0442299800763157,"Yes"]
["GT_Os_A_Specific_0033196","Os09g0357400","LOC_Os09g19280.1",-1.3667917,-1.6351929,-1.9429541,-1.6483129,0.005175701,704,0.005175701,0.0087758663674894,0.0294882623735795,"Yes"]
["Os08g0163800","Os08g0163800","LOC_Os08g06659.1",-2.015973,-1.4937882,-1.4294157,-1.6463923,0.036859635,3117,0.036859635,0.0388556469708302,0.0474315033638113,"Yes"]
["Os09g0559600","Os09g0559600","LOC_Os09g38670.1",-2.1270099,-1.146698,-1.6649051,-1.6462044,0.014541157,1630,0.014541157,0.0203191224133632,0.0357819513662576,"Yes"]
["Os11g0545000","Os11g0545000","LOC_Os11g34230.1",-1.0977058,-2.4175005,-1.3981991,-1.6378018,0.03025945,2729,0.03025945,0.0340189478932934,0.0444744059912055,"Yes"]
["Os02g0592700","Os02g0592700","LOC_Os02g37960.1",-2.2775812,-0.71749353,-1.9111166,-1.6353971,0.03386596,2955,0.03386596,0.0368362004487658,0.0459683132182741,"Yes"]
["Os01g0194600","Os01g0194600","LOC_Os01g09830.1",-1.6172991,-1.9308033,-1.3334732,-1.6271919,0.0038913523,1527,0.013420976,0.019035153328347,0.0352531334223968,"Yes"]
["Os04g0684800","Os04g0684800","LOC_Os04g58800.1",-1.3328304,-1.4011841,-2.1456556,-1.6265568,4.1373866E-3,404,0.00289421,0.0050361505858888,0.0287343473019801,"Yes"]
["Os03g0570800","Os03g0570800","LOC_Os03g37411.1",-1.5078635,-1.6611085,-1.7063513,-1.6251078,8.767358e-05,16,8.76736E-5,1.99451508352031E-4,0.0219786756,"Yes"]
["Os10g0130600","Os10g0130600","LOC_Os10g04060.1",-1.0309339,-1.9080367,-1.9332094,-1.62406,0.0239056,2341,0.0239056,0.0291822488157566,0.0409591463477146,"Yes"]
["osa-miR169g","Os04g0394766","No hit",-1.3276687,-1.179306,-2.3636413,-1.6235386,0.01652579,1784,0.01652579,0.0222388431812515,0.0371552374943946,"Yes"]
["Os01g0113900","Os01g0113900","LOC_Os01g02370.1",-1.7238641,-0.8957505,-2.2499661,-1.6231936,0.03568513,3053,0.03568513,0.038057840937422,0.0468827567736652,"Yes"]
["Os02g0540700","Os02g0540700","LOC_Os02g33680.1",-1.0534286,-1.2492113,-2.564208,-1.6222826,0.025728682,2451,0.025728682,0.0305534779356768,0.0421043425140758,"Yes"]
["Os08g0202300","Os08g0202300","LOC_Os08g10244.1",-1.0157385,-1.515914,-2.3309126,-1.620855,0.017686868,1876,0.017686868,0.0233856893542757,0.0378155797164179,"Yes"]
["Os02g0733500","Os02g0733500","LOC_Os02g50060.1",-1.5848289,-1.3589659,-1.9150853,-1.6196266,0.03269478,2890,0.03269478,0.0360259286960857,0.0453767344567474,"Yes"]
["Os01g0961300","Os01g0961300","None",-1.7083898,-1.6831813,-1.4630947,-1.6182219,0.00062273734,97,0.000622737,1.20917476938419E-3,0.0257504959484536,"Yes"]
["Os04g0639200","Os04g0639200","LOC_Os04g54630.1",-1.805666,-1.2325888,-1.814137,-1.617464,0.018089557,1901,0.018089557,0.0236973323360757,0.0381679185307732,"Yes"]
["Os01g0551100","Os01g0551100","LOC_Os01g37050.1",-1.124382,-1.376481,-2.3504477,-1.6171036,0.013180224,1508,0.013180224,0.018798304662179,0.0350569485835543,"Yes"]
["Os07g0570100","Os07g0570100","LOC_Os07g38260.1",-1.1875601,-1.739347,-1.9230189,-1.616642,0.0029575513,411,0.002957551,5.12341062079282E-3,0.0288631072043795,"Yes"]
["Os03g0725300","Os03g0725300","None",-1.9064069,-0.88102627,-2.0549808,-1.614138,0.012359245,2967,0.034045752,0.0369857890800299,0.0460254503781597,"Yes"]
["GT_Os_A_Specific_0382686","Os05g0382550","LOC_Os05g31744.1",-1.5789003,-1.4467049,-1.8143759,-1.613327,0.008231209,1047,0.008231209,0.013051608077786,0.0315333135616045,"Yes"]
["Os05g0580900","Os05g0580900","LOC_Os05g50420.1",-2.0778103,-1.2181072,-1.5437794,-1.6132323,0.027383592,2552,0.027383592,0.031812515582149,0.0430390233197492,"Yes"]
["Os06g0685200","Os06g0685200","LOC_Os06g47120.1",-2.413075,-1.0132961,-1.408598,-1.6116563,0.019076705,1975,0.019076705,0.0246197955622039,0.0387426145594936,"Yes"]
["Os03g0146400","Os03g0146400","LOC_Os03g05310.1",-1.8118944,-1.2566738,-1.7646122,-1.6110601,0.029809598,2698,0.029809598,0.0336325105958613,0.0443166410593031,"Yes"]
["Os12g0603800","Os12g0603800","LOC_Os12g41110.1",-1.5734205,-0.6936102,-2.5659084,-1.6109797,0.04155762,3364,0.04155762,0.0419346796310147,0.0495504202794292,"Yes"]
["Os01g0804200","Os01g0804200","No hit",-0.78617525,-1.8521442,-2.1881824,-1.6088339,0.04088897,3335,0.04088897,0.0415731737721266,0.0491771090464767,"Yes"]
["Os01g0193900","Os01g0193900","LOC_Os01g09760.1",-1.4644561,-1.1345491,-2.2218194,-1.6069416,7.8071165E-3,2289,0.02316893,0.0285340314136125,0.0405987672477064,"Yes"]
["Os09g0406500","Os09g0405300","None",-1.7324772,-1.1899195,-1.8979931,-1.6067966,0.010008046,401,0.00285441,0.0049987534280728,0.0285512182294264,"Yes"]
["Os09g0406500","Os09g0406500","LOC_Os09g24159.1",-1.7324772,-1.1899195,-1.8979931,-1.6067966,0.010008046,1230,0.010008046,0.0153328347045624,0.032635993907317,"Yes"]
["Os04g0668900","Os04g0668900","LOC_Os04g57320.1",-1.4465437,-1.1392207,-2.2337513,-1.6065053,0.040819895,2417,0.025237406,0.0301296434804288,0.0418813551783202,"Yes"]
["Os07g0204100","Os07g0204100","LOC_Os07g10420.1",-2.1282535,-1.2255049,-1.4633274,-1.6056952,5.1215235E-3,701,0.005121524,0.00873846920967339,0.0293044689928673,"Yes"]
["Os12g0155000","Os12g0155000","LOC_Os12g05880.1",-0.9679899,-1.6868453,-2.156343,-1.603726,0.02354028,2309,0.02354028,0.0287833457990526,0.0408921884278908,"Yes"]
["Os02g0605900","Os02g0605900","LOC_Os02g39330.1",-1.5024376,-0.9373665,-2.3694935,-1.6030992,0.01791497,1888,0.01791497,0.0235352779855397,0.0380598223887711,"Yes"]
["Os01g0128000","Os01g0128000","LOC_Os01g03720.1",-0.9882703,-1.5071392,-2.3062105,-1.60054,0.025005668,2406,0.025005668,0.0299925205684368,0.0416865063790523,"Yes"]
["Os12g0514500","Os12g0514500","LOC_Os12g32986.1",-2.0057974,-1.0065832,-1.7830772,-1.598486,0.007416463,2828,0.031670235,0.0352530541012216,0.0449184273638613,"Yes"]
["Os06g0224200","Os06g0224200","LOC_Os06g12030.1",-1.581953,-0.90914726,-2.2866788,-1.5925931,0.020292124,2085,0.020292124,0.0259910246821241,0.0390367910618705,"Yes"]
["Os02g0525900","Os02g0525900","LOC_Os02g32490.1",-2.3258152,-0.94120026,-1.4954853,-1.5875002,0.030289106,3071,0.036034923,0.0382822238843181,0.0470648245369586,"Yes"]
["Os01g0920100","Os01g0920100","LOC_Os01g69100.1",-2.068944,-0.6820364,-1.9983187,-1.5830997,0.028371846,2602,0.028371846,0.0324358015457491,0.0437353859746348,"Yes"]
["Os03g0116000","Os03g0116000","LOC_Os03g02480.1",-1.5772529,-1.1054759,-2.066163,-1.582964,0.027467264,2558,0.027467264,0.0318873098977811,0.0430692712681782,"Yes"]
["Os09g0133600","Os09g0133600","LOC_Os09g04790.1",-0.9644451,-1.4922342,-2.2916164,-1.5827652,0.0330346,2444,0.025640704,0.0304662179007728,0.0420805498134206,"Yes"]
["Os03g0241800","Os03g0241800","LOC_Os03g13830.1",-1.0084605,-1.5289559,-2.2088242,-1.5820802,0.03269273,2889,0.03269273,0.0360134629768137,0.0453895950259605,"Yes"]
["Os03g0157900","Os03g0157900","LOC_Os03g06200.1",-2.031207,-0.7848511,-1.9089918,-1.5750166,0.017301675,2284,0.02312602,0.0284717028172525,0.0406122881873905,"Yes"]
["Os04g0117900","Os04g0117900","LOC_Os04g02754.1",-1.200695,-1.7082372,-1.8121762,-1.5737028,0.0058848294,789,0.005884829,0.00983545250560957,0.0299164120646387,"Yes"]
["Os01g0757900","Os01g0757900","LOC_Os01g55310.1",-1.3735728,-1.4103775,-1.936058,-1.5733361,0.008104319,1034,0.008104319,0.01288955372725,0.0314375469139265,"Yes"]
["Os06g0541600","Os06g0541600","LOC_Os06g34960.1",-1.1900005,-1.8003168,-1.7289901,-1.5731025,0.004436173,612,0.004436173,0.00762902019446522,0.0290743299068627,"Yes"]
["Os01g0650800","Os01g0650800","LOC_Os01g46200.1",-2.1963215,-1.208941,-1.313869,-1.5730438,0.009063503,1135,0.009063503,0.0141485913737222,0.0320297009101321,"Yes"]
["Os04g0540500","Os04g0540500","None",-1.4682722,-1.1866193,-2.0543413,-1.5697442,0.0044612857,615,0.004461286,0.00766641735228122,0.0290962896682926,"Yes"]
["GT_Os_A_Specific_0027257","Os07g0585900","LOC_Os07g39720.1",-0.8122654,-1.4676003,-2.4240613,-1.5679756,0.03045238,2739,0.03045238,0.0341436050860134,0.0445945586637458,"Yes"]
["Os04g0490500","Os04g0490500","LOC_Os04g41310.1",-0.9535608,-1.7086792,-2.0370302,-1.5664234,0.00828221,1050,0.00828221,0.013089005235602,0.0316380422,"Yes"]
["Os11g0482200","Os11g0482200","LOC_Os11g29210.1",-1.3906093,-2.142767,-1.1546006,-1.5626589,0.016213167,1758,0.016213167,0.0219147344801795,0.0369914748788395,"Yes"]
["Os01g0840100","Os01g0840100","LOC_Os01g62290.1",-1.7386923,-0.9336481,-2.0155182,-1.5626196,0.010228661,1246,0.010228661,0.0155322862129144,0.0329270941179775,"Yes"]
["Os01g0299700","Os01g0299700","LOC_Os01g19420.1",-2.119182,-1.8999677,-0.6637831,-1.5609776,0.031276662,2803,0.031276662,0.0349414111194215,0.0447558656018551,"Yes"]
["GT_Os_A_Specific_0063563","Os04g0387000","LOC_Os04g31760.1",-1.2072935,-1.1212254,-2.3542204,-1.5609131,0.026616016,2497,0.026616016,0.0311269010221889,0.0427540409195034,"Yes"]
["Os03g0302100","Os03g0302100","None",-1.2576017,-1.5023179,-1.921412,-1.5604439,0.012644343,1451,0.012644343,0.0180877586636748,0.0349527634548587,"Yes"]
["Os01g0681800","Os01g0681800","LOC_Os01g48950.1",-1.0660343,-1.8354831,-1.7741823,-1.5585666,0.004057447,558,0.004057447,0.00695587135377711,0.0291656270913978,"Yes"]
["Os01g0606900","Os01g0606900","LOC_Os01g42190.1",-1.048192,-1.5473309,-2.0731316,-1.5562181,0.01371132,1552,0.01371132,0.0193467963101471,0.0354356343556701,"Yes"]
["Os04g0308000","Os04g0308000","LOC_Os04g24294.1",-2.054439,-1.2043982,-1.4085855,-1.5558076,0.013300729,1519,0.013300729,0.018935427574171,0.0351212798018433,"Yes"]
["Os08g0108200","Os08g0108200","LOC_Os08g01680.1",-1.4352446,-0.76271725,-2.4617834,-1.5532484,0.034962635,3016,0.034962635,0.037596609324358,0.0464970586820291,"Yes"]
["Os07g0251200","Os07g0251200","LOC_Os07g14740.1",-1.4553571,-1.2751164,-1.9272528,-1.5525755,0.01577257,1722,0.01577257,0.0214659685863874,0.0367385471951219,"Yes"]
["Os01g0869200","Os01g0869200","LOC_Os01g64890.1",-1.4414182,-0.9138684,-2.2879725,-1.547753,0.02794258,2593,0.02794258,0.0323236100723011,0.043223173305052,"Yes"]
["Os02g0456000","Os02g0456000","LOC_Os02g25840.1",-1.2020602,-1.8122964,-1.6230779,-1.5458115,0.021642042,2174,0.021642042,0.0271004736973323,0.0399292688417663,"Yes"]
["Os08g0535800","Os08g0535800","LOC_Os08g42400.1",-0.9521494,-1.5770683,-2.1038675,-1.5443617,0.043622922,3415,0.042556193,0.0425704313138868,0.0499832767563689,"Yes"]
["Os04g0600200","Os04g0600200","LOC_Os04g51150.1",-2.1736999,-0.933835,-1.5134959,-1.5403436,0.015812397,1726,0.015812397,0.0215158314634754,0.0367459584976825,"Yes"]
["Os04g0573900","Os04g0573900","LOC_Os04g48460.1",-1.7531815,-0.9984298,-1.863877,-1.538496,0.016221825,2699,0.02981007,0.0336449763151333,0.0443009228492034,"Yes"]
["Os01g0114300","Os01g0114300","LOC_Os01g02400.1",-1.5585351,-1.1640296,-1.892817,-1.5384606,0.002691071,481,0.003470878,5.99601096983296E-3,0.0289432259002079,"Yes"]
["Os04g0577000","Os04g0577000","LOC_Os04g48770.2",-1.1248331,-1.0074103,-2.481876,-1.5380398,0.04250739,3411,0.04250739,0.0425205684367988,0.0499845034564643,"Yes"]
["Os04g0476400","Os04g0476400","LOC_Os04g40050.1",-1.8048081,-0.8784013,-1.9276853,-1.5369649,0.026964987,2529,0.026964987,0.031525804038893,0.0427665333558718,"Yes"]
["Os06g0226000","Os06g0226000","LOC_Os06g12170.1",-1.7110424,-1.0229607,-1.875648,-1.5365504,0.018200105,2839,0.03177552,0.0353901770132136,0.0448931351602677,"Yes"]
["Os01g0733200","Os01g0733200","LOC_Os01g53220.1",-1.4977269,-1.0908518,-2.0206327,-1.5364038,0.009084436,1836,0.017103288,0.0228870605833956,0.0373645360392156,"Yes"]
["Os09g0520700","Os09g0520700","LOC_Os09g34910.1",-2.243864,-1.000495,-1.3637371,-1.5360321,0.022148361,227,0.001605737,2.82971827474445E-3,0.028372736154185,"Yes"]
["Os05g0442700","Os05g0442700","LOC_Os05g37080.1",-1.1706138,-1.6779943,-1.7593923,-1.5360001,0.012799461,1472,0.012799461,0.0183495387683869,0.0348767921677989,"Yes"]
["GT_Os_A_Specific_0004745","Os12g0579450","None",-1.2290182,-1.1776075,-2.2011204,-1.5359154,0.025672393,2445,0.025672393,0.0304786836200448,0.0421153244674846,"Yes"]
["Os11g0543100","Os11g0543100","LOC_Os11g34080.1",-1.4156046,-1.5645056,-1.625123,-1.5350777,0.03722391,3141,0.03722391,0.0391548242333582,0.0475342575644699,"Yes"]
["Os02g0706500","Os02g0706500","LOC_Os02g47760.1",-2.3903131,-1.0001092,-1.21422,-1.5348808,0.027761942,765,0.005663066,0.00953627524308152,0.0296922323215686,"Yes"]
["Os12g0527700","Os12g0527700","LOC_Os12g34320.1",-1.2945263,-1.3819065,-1.9249997,-1.533811,0.0071954397,933,7.19544E-3,0.0116305160807778,0.0309334510610932,"Yes"]
["Os04g0464900","Os04g0464966","LOC_Os04g39080.1",-1.1982393,-1.4317865,-1.9683056,-1.5327772,0.0052639404,681,0.004969136,0.00848915482423336,0.0292675543259911,"Yes"]
["Os01g0222900","Os01g0222900","None",-1.9743147,-1.5979033,-1.0209174,-1.5310451,0.008096316,1032,0.008096316,0.012864622288706,0.0314673677093023,"Yes"]
["Os07g0209000","Os07g0209000","LOC_Os07g10830.1",-2.0078216,-0.8138342,-1.7680101,-1.5298886,0.013790233,1295,0.010688663,0.0161431064572425,0.0331059670216216,"Yes"]
["Os04g0643100","Os04g0643100","LOC_Os04g55040.1",-1.9434338,-0.71374893,-1.9311275,-1.5294367,0.023415392,2302,0.023415392,0.0286960857641485,0.040798930196351,"Yes"]
["Os07g0408100","Os07g0408100","LOC_Os07g22534.1",-1.317719,-0.92179346,-2.3479977,-1.52917,0.026159542,2475,0.026159542,0.0308526551982049,0.0423943123078787,"Yes"]
["Os04g0530200","Os04g0530200","LOC_Os04g44790.1",-1.5096226,-0.83486176,-2.2406163,-1.5283669,0.020011565,1949,0.018651422,0.0242956868611318,0.0383842245469471,"Yes"]
["Os03g0213100","Os03g0213100","LOC_Os03g11440.1",-1.0158205,-1.2480164,-2.3153133,-1.5263834,0.018463597,1194,0.009615124,0.0148840688107703,0.0323000522311557,"Yes"]
["Os07g0167500","Os07g0167500","LOC_Os07g07300.1",-1.3077288,-1.9582973,-1.3076892,-1.5245718,0.0066885133,871,0.006688513,0.0108576414859137,0.0308009479253731,"Yes"]
["Os01g0883000","Os01g0883000","LOC_Os01g66020.1",-1.5444145,-1.5591187,-1.4602509,-1.5212613,0.0027450707,387,2.745071E-3,0.00482423335826477,0.0284508521472868,"Yes"]
["Os04g0508500","Os04g0508500","LOC_Os04g42950.1",-1.5886087,-1.137938,-1.8192468,-1.5152645,0.040510893,3319,0.040510893,0.0413737222637746,0.0489572738243446,"Yes"]
["Os02g0504000","Os02g0504000","LOC_Os02g30110.1",-1.2469511,-1.7506404,-1.5308032,-1.5094649,0.01312861,1503,0.01312861,0.018735976065819,0.0350358314770459,"Yes"]
["Os01g0694000","Os01g0694000","LOC_Os01g49910.1",-1.8865848,-1.0497713,-1.5902319,-1.5088626,0.039136942,3233,0.039136942,0.0403016704063824,0.0485549874302505,"Yes"]
["Os05g0468100","Os05g0468100","LOC_Os05g39180.1",-2.547484,-1.0286956,-0.9466486,-1.5076094,0.041611336,3370,0.041611336,0.0420094739466467,0.0495261331442136,"Yes"]
["Os03g0275800","Os03g0275800","None",-1.4994507,-1.4177885,-1.6047459,-1.5073284,0.009776235,1207,0.009776235,0.0150461231613064,0.0324875547514498,"Yes"]
["Os12g0525300","Os12g0525300","None",-1.0548887,-1.494195,-1.9720774,-1.5070537,0.005841023,785,0.005841023,0.00978558962852156,0.0298450232522293,"Yes"]
["Os04g0683700","Os04g0683700","LOC_Os04g58710.1",-1.4517756,-1.206501,-1.8584604,-1.505579,0.009509005,1186,0.009509005,0.0147843430565943,0.0321590379890387,"Yes"]
["Os05g0130500","Os05g0130500","None",-1.475307,-1.3539934,-1.666173,-1.4984912,0.0039408323,549,3.940832E-3,0.00684367988032909,0.0287917616612021,"Yes"]
["Os03g0281300","Os03g0281300","LOC_Os03g17270.1",-1.6755309,-0.8482218,-1.9641662,-1.495973,0.03305136,2907,0.03305136,0.0362378459237098,0.0456033728792569,"Yes"]
["Os09g0464100","Os09g0464100","None",-1.7157106,-0.812963,-1.9586015,-1.4957584,0.015628943,1711,0.015628943,0.0213288456743954,0.0366380422986557,"Yes"]
["Os12g0441700","Os12g0441700","LOC_Os12g25494.1",-1.3825603,-1.1328659,-1.971499,-1.4956417,0.010953113,1325,0.010953113,0.0165170780354026,0.0331569330135849,"Yes"]
["Os02g0178100","Os02g0178100","LOC_Os02g08150.1",-1.2512808,-1.5980229,-1.6367803,-1.4953613,0.0030922925,429,0.003092293,0.00534779356768885,0.0289118583286713,"Yes"]
["Os03g0363200","Os03g0363200","LOC_Os03g24830.1",-1.7039418,-0.86882544,-1.9071121,-1.4932932,0.027507542,2559,0.027507542,0.0318997756170531,0.0431155728651817,"Yes"]
["Os03g0766900","Os03g0766900","LOC_Os03g55784.1",-1.4444051,-0.67843676,-2.3567314,-1.4931911,0.035435837,3040,0.035435837,0.037895786586886,0.0467543230944078,"Yes"]
["Os05g0534800","Os05g0534800","LOC_Os05g45840.1",-1.6287813,-0.9069052,-1.9396181,-1.4917682,0.01353544,1539,0.01353544,0.019184741959611,0.0352765755945419,"Yes"]
["Os03g0225600","Os03g0225600","LOC_Os03g12460.1",-1.7005992,-0.9928541,-1.7792697,-1.4909077,0.004122661,564,0.004122661,0.00703066566940912,0.0293191370053191,"Yes"]
["Os01g0841600","Os01g0841600","LOC_Os01g62420.1",-1.4312534,-1.1591349,-1.8774128,-1.489267,0.023111116,2772,0.030900983,0.0345549738219895,0.0447127860075757,"Yes"]
["Os03g0297000","Os03g0297000","LOC_Os03g18560.1",-1.4613199,-1.3575325,-1.6481962,-1.4890162,0.00073226675,250,1.747347E-3,0.00311642981800049,0.028034435268,"Yes"]
["Os01g0178200","Os01g0178200","LOC_Os01g08290.1",-1.2874026,-1.1941743,-1.9839382,-1.488505,8.08473E-3,1031,8.08473E-3,0.012852156569434,0.0314528147720659,"Yes"]
["Os05g0424300","Os05g0424300","LOC_Os05g35010.1",-1.3006911,-1.1354785,-2.029077,-1.4884156,0.01779968,1881,0.01779968,0.0234480179506357,0.0379556174800638,"Yes"]
["Os03g0132900","Os03g0132900","LOC_Os03g04060.1",-1.3119841,-1.6569834,-1.4932871,-1.4874182,4.9486966E-3,2431,0.025486896,0.0303041635502368,0.0420518057819827,"Yes"]
["Os02g0573500","Os02g0573500","LOC_Os02g36414.1",-1.1968727,-1.3954868,-1.8692551,-1.4872049,0.002248442,731,5.388065E-3,0.00911244078783345,0.0295643347674418,"Yes"]
["Os10g0515200","Os10g0515200","LOC_Os10g37110.1",-1.497045,-0.7606611,-2.193932,-1.4838794,0.039806712,3280,0.039806712,0.0408875592121665,0.0486782688512195,"Yes"]
["Os11g0629500","Os11g0629500","LOC_Os11g41160.1",-1.8274941,-1.1333151,-1.4898963,-1.4835685,0.0036140832,500,0.003614083,6.23285963600099E-3,0.028992173826,"Yes"]
["Os06g0218900","Os06g0218900","LOC_Os06g11520.1",-0.8753948,-1.7593913,-1.8119421,-1.4822427,0.0395055,3263,0.0395055,0.0406756419845425,0.0485616182960465,"Yes"]
["osa-miR169l","osa-miR169l","No hit",-1.7817135,-0.6941376,-1.9656153,-1.4804888,0.025676893,2447,0.025676893,0.0305036150585888,0.0420882786362893,"Yes"]
["Os05g0363600","Os05g0363600","LOC_Os05g30030.1",-1.8950672,-0.77691793,-1.7673588,-1.4797813,0.017069235,1831,0.017069235,0.0228247319870356,0.0373919724658656,"Yes"]
["Os05g0467700","Os05g0467700","LOC_Os05g39150.1",-1.1169157,-1.8150315,-1.5010791,-1.4776754,0.011730683,1389,0.011730683,0.0173148840688107,0.0338745640842332,"Yes"]
["Os04g0543700","Os04g0543700","LOC_Os04g45960.1",-0.9222069,-1.4051776,-2.1007662,-1.4760503,0.0280307,2595,0.0280307,0.0323485415108451,0.0433260646242774,"Yes"]
["Os09g0420800","Os09g0420800","LOC_Os09g25320.1",-0.8914747,-1.2050171,-2.3273535,-1.4746151,0.041429676,3355,0.041429676,0.0418224881575666,0.0495303816500745,"Yes"]
["Os05g0496400","Os05g0496400","LOC_Os05g41660.1",-0.95728016,-1.4975195,-1.9666924,-1.4738307,0.0128247095,1473,0.01282471,0.0183620044876589,0.0349218681670061,"Yes"]
["Os03g0582200","Os03g0582200","LOC_Os03g38590.1",-1.4096785,-0.9532099,-2.0577745,-1.4735543,0.011144126,2225,0.02232727,0.0277362253802044,0.0402492943685393,"Yes"]
["Os05g0173400","Os02g0140500","LOC_Os02g04760.1",-1.5448761,-1.3278694,-1.533083,-1.4686095,0.027343402,483,0.00348099,0.00602094240837696,0.0289073517391304,"Yes"]
["Os03g0599800","Os03g0599800","LOC_Os03g40270.1",-1.5734835,-1.1201172,-1.7078886,-1.4671631,0.009480722,3257,0.03945862,0.0406008476689105,0.0485933450475898,"Yes"]
["Os04g0323500","Os04g0323500","LOC_Os04g25740.1",-1.7154512,-1.6556869,-1.0256476,-1.4655952,0.009436542,1177,0.009436542,0.0146721515831463,0.0321580033661852,"Yes"]
["Os03g0214100","Os03g0214100","LOC_Os03g11540.1",-0.97089386,-1.4250464,-1.9995251,-1.4651551,0.025582068,2437,0.025582068,0.0303789578658688,0.0421049137250718,"Yes"]
["Os10g0567000","Os10g0567000","LOC_Os10g41749.1",-1.0750246,-1.1026673,-2.2145138,-1.4640685,0.018160395,1909,0.018160395,0.0237970580902518,0.038156806885804,"Yes"]
["Os12g0194100","Os12g0194100","LOC_Os12g09220.1",-1.1506953,-1.4480896,-1.7888427,-1.4625425,0.03927985,3240,0.03927985,0.0403889304412864,0.0486269994907407,"Yes"]
["Os12g0460100","Os12g0460100","LOC_Os12g27440.1",-1.3265762,-0.8414211,-2.2151074,-1.4610349,0.026397957,2486,0.026397957,0.0309897781101969,0.0425913940172968,"Yes"]
["Os02g0497700","Os02g0497700","LOC_Os02g29480.1",-1.479074,-1.0625896,-1.8392167,-1.4602934,0.0072238157,2113,0.02078541,0.0263400648217402,0.039455882399432,"Yes"]
["GT_Os_A_Specific_0039269","Os01g0864566","None",-1.0842838,-1.1517577,-2.1400762,-1.4587059,0.01606012,1748,0.01606012,0.0217900772874594,0.0368519115102974,"Yes"]
["Os02g0612200","Os02g0612200","LOC_Os02g39884.1",-0.90005684,-1.2330041,-2.2420197,-1.4583602,0.03338475,2928,0.03338475,0.0364996260284218,0.0457330028176229,"Yes"]
["Os06g0168500","Os06g0168500","LOC_Os06g07200.1",-0.9103584,-1.182209,-2.2820158,-1.4581944,0.030043187,2720,0.030043187,0.0339067564198454,0.0443026555356617,"Yes"]
["Os10g0445900","Os10g0445900","LOC_Os10g30880.1",-0.92428064,-1.4565735,-1.9848089,-1.455221,0.02761405,2570,0.02761405,0.0320368985290451,0.0430972585797665,"Yes"]
["Os04g0556500","Os04g0556500","LOC_Os04g46980.1",-1.0807066,-1.4356766,-1.8478336,-1.454739,0.011914691,1401,0.011914691,0.0174644727000747,0.0341112245546038,"Yes"]
["Os07g0180700","Os07g0180700","LOC_Os07g08300.1",-1.2289762,-1.1758876,-1.9556446,-1.4535028,0.010387899,1266,0.010387899,0.0157816005983545,0.0329114240829383,"Yes"]
["Os07g0566200","Os07g0566200","LOC_Os07g37890.1",-0.84776974,-1.5020723,-2.000867,-1.4502363,0.033393838,2930,0.033393838,0.0365245574669658,0.0457142266955631,"Yes"]
["Os03g0310600","Os03g0310600","LOC_Os03g19700.1",-0.9796305,-1.696528,-1.6740103,-1.4500562,0.006740477,880,0.006740477,0.0109698329593617,0.0307227877806818,"Yes"]
["Os01g0862600","Os01g0862600","LOC_Os01g64300.1",-1.5554256,-0.88398933,-1.9097037,-1.4497062,0.023779165,2325,0.023779165,0.0289827973074046,0.0410228949741935,"Yes"]
["Os03g0815300","Os01g0740300","LOC_Os01g53779.2",-1.1550279,-1.018085,-2.1696286,-1.4475805,0.030027654,2714,0.029956145,0.0338319621042134,0.0442719593201916,"Yes"]
["Os07g0105200","Os07g0105200","LOC_Os07g01460.1",-1.1003866,-1.69413,-1.5443988,-1.4463052,0.035000727,3018,0.035000727,0.037621540762902,0.0465168707743538,"Yes"]
["Os03g0675700","Os03g0675700","LOC_Os03g47240.1",-1.0251293,-1.1444111,-2.166726,-1.4454222,0.019821651,2043,0.019821651,0.0254674644727,0.0389156349295154,"Yes"]
["Os11g0274100","Os11g0274100","LOC_Os11g17380.1",-1.0461607,-1.4089427,-1.8806162,-1.4452399,0.029394658,2671,0.029394658,0.0332959361755173,0.0441415100104829,"Yes"]
["Os02g0132500","Os02g0132500","LOC_Os02g03960.1",-2.0467896,-1.4775019,-0.81027365,-1.4448551,0.030616043,2752,0.030616043,0.0343056594365494,0.0446224376718749,"Yes"]
["Os01g0960400","Os01g0960400","LOC_Os01g72990.1",-2.0411844,-1.1090155,-1.1831288,-1.4444429,0.009480712,1185,0.009480712,0.0147718773373223,0.0320904099848101,"Yes"]
["Os03g0366000","Os03g0366000","LOC_Os03g25050.1",-1.1793737,-1.370431,-1.7779036,-1.4425694,0.009082768,1136,0.009082768,0.0141610570929942,0.0320695268028169,"Yes"]
["GT_Os_A_Specific_0049440","Os08g0102900","LOC_Os08g01260.1",-0.8090763,-1.8384771,-1.6759586,-1.4411707,0.0200076,2055,0.0200076,0.0256170531039641,0.0390513302189781,"Yes"]
["Os01g0389700","Os01g0389700","LOC_Os01g29330.1",-1.2066078,-1.6696873,-1.445087,-1.4404607,0.0077719227,996,7.771923E-3,0.0124158563949139,0.0312983766596385,"Yes"]
["GT_Os_A_Specific_0005579","Os02g0806600","LOC_Os02g56270.1",-1.1294494,-1.4656615,-1.7256422,-1.440251,0.0014786988,412,0.002962902,0.00513587634006482,0.0288451454417475,"Yes"]
["Os03g0820400","Os03g0820400","LOC_Os03g60570.1",-1.033042,-1.0720043,-2.2108727,-1.4386396,0.026424246,2487,0.026424246,0.0310022438294689,0.0426166669505428,"Yes"]
["Os05g0127300","Os05g0127300","LOC_Os05g03620.1",-1.755599,-1.221241,-1.3379388,-1.4382596,0.0011337434,165,1.133743E-3,0.00205684367988032,0.0275602616545454,"Yes"]
["Os06g0125500","Os06g0125500","LOC_Os06g03560.1",-0.72476196,-1.5298738,-2.0524197,-1.4356852,0.040846713,1487,0.012948839,0.0185365245574669,0.0349279039872226,"Yes"]
["Os10g0377400","Os10g0377400","LOC_Os10g23100.1",-0.8534727,-1.1391916,-2.3121347,-1.4349331,0.037435874,2653,0.02916694,0.0330715532286212,0.0440967193139841,"Yes"]
["Os05g0450300","Os05g0450300","LOC_Os05g37780.1",-1.2721257,-1.3941259,-1.625658,-1.4306365,0.00269465,379,0.00269465,0.00472450760408875,0.0285177866754617,"Yes"]
["Os03g0852500","Os03g0852500","LOC_Os03g63550.1",-1.5576515,-0.98953056,-1.7433119,-1.4301647,0.014598,1635,0.014598,0.0203814510097232,0.0358119743119266,"Yes"]
["Os04g0352400","Os04g0352400","LOC_Os04g28420.1",-1.296618,-0.96918106,-2.0177445,-1.4278479,0.014150702,1069,0.008443231,0.0133258539017701,0.0316798873161833,"Yes"]
["GT_Os_A_Specific_0121847","Os09g0369500","LOC_Os09g20400.1",-0.9402976,-1.6774383,-1.6634212,-1.4270524,0.04165173,3371,0.04165173,0.0420219396659187,0.0495595043102936,"Yes"]
["Os07g0613800","Os07g0613800","LOC_Os07g42220.1",-1.5597,-1.0343161,-1.6823735,-1.4254632,0.022686068,2255,0.022686068,0.0281101969583645,0.0403520260523281,"Yes"]
["Os01g0623200","Os01g0623200","LOC_Os01g43460.1",-1.8824887,-0.6722574,-1.7216048,-1.4254503,0.025417175,2427,0.025417175,0.0302543006731488,0.0420058874845488,"Yes"]
["Os06g0128400","Os06g0128400","LOC_Os06g03780.1",-1.6049294,-1.0735545,-1.5947952,-1.4244264,8.299664E-3,2548,0.02728729,0.031762652705061,0.0429549922252747,"Yes"]
["Os02g0705400","Os02g0705400","LOC_Os02g47650.1",-1.9647765,-0.83729553,-1.4631834,-1.4217519,0.037860777,3164,0.037860777,0.0394415357766143,0.0479960734977876,"Yes"]
["Os09g0515100","Os09g0515100","LOC_Os09g33980.1",-1.2541518,-0.8627906,-2.1464853,-1.4211426,0.04014355,3298,0.04014355,0.0411119421590625,0.0488222495603395,"Yes"]
["Os05g0486200","Os05g0486200","LOC_Os05g40780.1",-1.0693026,-1.204546,-1.9863462,-1.4200649,0.008405483,1062,0.008405483,0.0132385938668661,0.0317461321214689,"Yes"]
["Os09g0550500","Os11g0631825","LOC_Os11g41365.1",-1.3605828,-1.4465833,-1.4453483,-1.4175048,0.0024940805,343,2.494081E-3,0.00427574171029668,0.0291654778163265,"Yes"]
["Os09g0550500","Os09g0550500","LOC_Os09g37790.1",-1.3605828,-1.4465833,-1.4453483,-1.4175048,0.0024940805,344,2.494081E-3,0.00428820742956868,0.0290806944505813,"Yes"]
["Os01g0743800","Os01g0743800","LOC_Os01g54050.1",-1.1522493,-1.4037147,-1.6946926,-1.4168855,0.018431755,1935,0.018431755,0.0241211667913238,0.038206599124031,"Yes"]
["Os05g0476700","Os05g0476700","LOC_Os05g39930.1",-1.1479292,-1.0189905,-2.0830069,-1.4166422,0.016271617,1594,0.014102468,0.0198703565195711,0.0354861977089084,"Yes"]
["Os03g0237500","Os03g0237500","LOC_Os03g13450.1",-1.178904,-1.2048492,-1.866148,-1.4166337,0.012290082,1433,0.012290082,0.0178633757167788,0.0344002225415212,"Yes"]
["Os11g0705200","Os11g0705200","LOC_Os11g47870.1",-2.1154408,-0.97768164,-1.1507945,-1.414639,0.01819344,1912,0.01819344,0.0238344552480678,0.0381662593305439,"Yes"]
["Os12g0299300","Os12g0299300","LOC_Os12g20390.1",-1.1165705,-1.1382504,-1.9883585,-1.4143931,0.008173412,2518,0.026842423,0.031388681126901,0.0427581249614773,"Yes"]
["GT_Os_A_Specific_0080553","Os02g0558700","LOC_Os02g35240.1",-1.4409595,-1.0316362,-1.7663131,-1.4129696,0.0032960582,463,0.003296058,0.00577162802293692,0.0285539711403887,"Yes"]
["Os09g0511700","Os09g0511700","LOC_Os09g33690.1",-1.3095689,-1.4228339,-1.5053754,-1.4125928,0.020998519,2128,0.020998519,0.0265270506108202,0.0395794453519736,"Yes"]
["Os05g0100600","Os05g0100600","LOC_Os05g01030.1",-0.8083,-1.6675739,-1.7530632,-1.4096457,9.21837E-3,1590,0.014079629,0.0198204936424831,0.0355178565528301,"Yes"]
["Os05g0520600","Os05g0520600","LOC_Os05g44420.1",-1.0783148,-1.9222121,-1.2268562,-1.4091277,0.010459621,1274,0.010459621,0.0158813263525305,0.0329305650164835,"Yes"]
["Os12g0233800","Os12g0233800","LOC_Os12g13170.1",-0.9689112,-1.2406278,-2.0066342,-1.4053911,0.018006338,1891,0.018006338,0.0235726751433557,0.0381932425795875,"Yes"]
["Os02g0784700","Os02g0784700","LOC_Os02g54340.1",-1.5562143,-0.84961224,-1.8053455,-1.4037241,0.010864587,1317,0.010864587,0.0164173522812266,0.0330887307949886,"Yes"]
["Os08g0521000","Os08g0521000","LOC_Os08g40940.1",-1.9796576,-0.77734566,-1.4521213,-1.4030415,0.018584142,1946,0.018584142,0.0242582897033158,0.0383047243381295,"Yes"]
["Os01g0952900","Os01g0952900","LOC_Os01g72360.1",-0.9657631,-1.250143,-1.9869299,-1.4009453,0.010981072,1328,0.010981072,0.0165544751932186,0.0331664757469879,"Yes"]
["Os09g0565800","Os01g0528300","LOC_Os01g34450.1",-1.8698325,-1.246531,-1.0847001,-1.4003545,0.004800324,659,0.004800324,0.00821490900024931,0.0292171465311077,"Yes"]
["Os04g0569000","Os04g0569000","LOC_Os04g48060.1",-1.6757016,-0.68874407,-1.8301196,-1.3981885,0.017688604,1877,0.017688604,0.0233981550735477,0.0377991425913692,"Yes"]
["Os07g0670800","Os07g0670800","LOC_Os07g47430.1",-0.7407789,-1.5038681,-1.9451227,-1.3965899,0.026875906,2520,0.026875906,0.031413612565445,0.0427774837166666,"Yes"]
["Os09g0353200","Os09g0353200","LOC_Os09g18360.1",-1.7064252,-0.8051081,-1.6771483,-1.3962272,0.027199328,2541,0.027199328,0.031675392670157,0.042934476429752,"Yes"]
["Os09g0376900","Os09g0376900","LOC_Os09g21000.1",-1.2659187,-1.1812015,-1.7367349,-1.3946184,0.01784303,2960,0.03390299,0.0368985290451259,0.0459408421925675,"Yes"]
["Os09g0467200","Os09g0467200","LOC_Os09g29200.1",-1.514616,-0.9291668,-1.7333212,-1.392368,0.024824182,2678,0.029549787,0.0333831962104213,0.0442584748532486,"Yes"]
["Os09g0444700","Os09g0444700","LOC_Os09g27240.1",-1.5056162,-1.2258329,-1.4409738,-1.3908076,0.024229633,2357,0.024229633,0.0293817003241087,0.0412325235311837,"Yes"]
["Os12g0631600","Os12g0631600","LOC_Os12g43580.1",-0.7248769,-1.3344498,-2.1078744,-1.389067,0.027330726,2550,0.027330726,0.031787584143605,0.0429896243082352,"Yes"]
["Os01g0279300","Os01g0279300","LOC_Os01g17190.1",-1.2679806,-1.0616035,-1.8351812,-1.3882551,0.006775245,887,0.006775245,0.0110570929942657,0.0306375509526493,"Yes"]
["GT_Os_A_Specific_0214638","Os03g0674900","LOC_Os03g47160.1",-1.6678696,-1.3570933,-1.1360588,-1.3870072,0.025529683,2433,0.025529683,0.0303290949887808,0.0420877757965474,"Yes"]
["Os03g0314400","Os03g0314400","LOC_Os03g19980.1",-1.1859226,-1.5973454,-1.3775082,-1.3869253,0.004417209,610,0.004417209,0.00760408875592121,0.0290449595065573,"Yes"]
["Os10g0337700","Os10g0337700","LOC_Os10g19200.1",-1.4515243,-1.5489883,-1.1575861,-1.3860329,0.017248485,1845,0.017248485,0.0229992520568436,0.0374979259268292,"Yes"]
["Os04g0402100","Os04g0402100","LOC_Os04g32950.1",-1.3099813,-0.7023077,-2.143055,-1.3851147,0.034720886,2979,0.034267217,0.0371353777112939,0.0461382367865055,"Yes"]
["Os05g0548900","Os05g0548900","LOC_Os05g47540.1",-1.537992,-1.2993922,-1.3168817,-1.3847553,0.0005368224,90,0.000536822,0.00112191473448017,0.0239243671333333,"Yes"]
["Os01g0773600","Os01g0773600","LOC_Os01g56670.1",-2.1013575,-0.60980844,-1.4413934,-1.3841864,0.029472923,2675,0.029472923,0.0333457990526053,0.0441928576272897,"Yes"]
["Os03g0238300","Os03g0238300","LOC_Os03g13520.1",-1.1508384,-1.4068146,-1.59407,-1.3839077,2.7142537E-3,1397,0.011846301,0.0174146098229867,0.0340125363715103,"Yes"]
["Os02g0717700","Os02g0717700","LOC_Os02g48650.1",-1.3961492,-1.050446,-1.7037072,-1.3834342,0.0039518485,550,0.003951849,0.00685614559960109,0.02881975698,"Yes"]
["Os02g0582300","Os02g0582300","LOC_Os02g37140.1",-1.4064984,-0.9110031,-1.8315697,-1.3830237,0.036009286,3070,0.036009286,0.0382697581650461,0.0470466599824104,"Yes"]
["Os02g0303200","Os02g0303200","None",-1.1419783,-1.1434455,-1.8630195,-1.3828144,0.019794969,2037,0.019794969,0.025392670157068,0.0389777224639175,"Yes"]
["Os11g0704500","Os11g0704500","LOC_Os11g47809.1",-1.2895517,-1.0214577,-1.8360729,-1.3823608,0.006529093,2148,0.021324083,0.0267763649962602,0.0398188533114525,"Yes"]
["Os01g0176200","Os01g0176200","LOC_Os01g08110.1",-0.8408003,-1.5862055,-1.712831,-1.3799456,0.023556678,832,0.00640757,0.0103714784343056,0.03089034046875,"Yes"]
["Os01g0764900","Os01g0764900","LOC_Os01g55950.1",-1.4886122,-1.2088866,-1.4383554,-1.3786181,0.035388127,1690,0.015379006,0.0210670655696833,0.0365001142402366,"Yes"]
["Os11g0109900","Os11g0109900","LOC_Os11g01869.1",-1.8810215,-0.5010047,-1.7499776,-1.3773346,0.03200961,2850,0.03200961,0.0355272999252056,0.0450493142842105,"Yes"]
["Os03g0643300","Os03g0643300","LOC_Os03g44150.1",-1.1962032,-0.99595356,-1.9393816,-1.3771795,0.011041074,1334,0.011041074,0.0166292695088506,0.0331977120044977,"Yes"]
["Os03g0110500","Os03g0110500","LOC_Os03g01980.1",-1.3827844,-0.75021124,-1.9962306,-1.3764087,0.018876772,1966,0.018876772,0.0245076040887559,0.0385120714608341,"Yes"]
["Os07g0227600","Os07g0227600","LOC_Os07g12510.1",-1.2820401,-1.4985499,-1.3483424,-1.3763108,0.029466487,2674,0.029466487,0.0333333333333333,0.0441997305,"Yes"]
["Os09g0400500","Os09g0400500","LOC_Os09g23570.1",-0.9675164,-1.1358476,-2.0225596,-1.3753079,0.032170556,2870,0.032170556,0.0357766143106457,0.0449603136292682,"Yes"]
["Os04g0652400","Os04g0652400","LOC_Os04g55800.1",-1.1572433,-0.76073503,-2.2046838,-1.3742207,0.029803354,2695,0.029803354,0.0335951134380453,0.0443566801090909,"Yes"]
["GT_Os_A_Specific_0088555","Os04g0111100","LOC_Os04g02030.1",-1.5843678,-1.2650561,-1.2726884,-1.3740374,0.014710689,1641,0.014710689,0.0204562453253552,0.0359564738446069,"Yes"]
["Os02g0603600","Os02g0603600","LOC_Os02g39140.1",-0.6122246,-1.6536283,-1.8506842,-1.372179,0.029761616,2691,0.029761616,0.0335452505609573,0.0443604019977703,"Yes"]
["GT_Os_A_Specific_0034787","Os03g0246050","LOC_Os03g14205.1",-1.3433404,-1.300262,-1.4599981,-1.3678669,0.004240881,583,0.004240881,0.00726751433557716,0.0291769703104631,"Yes"]
["Os04g0665600","Os04g0665600","LOC_Os04g56990.1",-0.951303,-1.2673178,-1.8817649,-1.3667952,0.0091146855,1140,0.009114686,0.0142109199700822,0.0320693031105263,"Yes"]
["Os01g0859200","Os01g0859200","LOC_Os01g63990.1",-1.0182762,-1.3218923,-1.7601204,-1.366763,0.015734607,1719,0.015734607,0.0214285714285714,0.036714083,"Yes"]
["GT_Os_A_Specific_0166862","Os01g0210200","LOC_Os01g11200.1",-0.921268,-1.7199652,-1.4587951,-1.366676,0.041574493,3367,0.041574493,0.0419720767888307,0.049526371079002,"Yes"]
["Os07g0633300","Os07g0633300","LOC_Os07g43960.1",-1.4116311,-0.7062082,-1.9722376,-1.363359,0.02177356,2187,0.02177356,0.0272625280478683,0.0399331271879286,"Yes"]
["Os07g0633300","Os07g0633200","LOC_Os07g43950.1",-1.4116311,-0.7062082,-1.9722376,-1.363359,0.02177356,3391,0.042186998,0.0422712540513587,0.0499003388316131,"Yes"]
["Os01g0815400","Os01g0815400","LOC_Os01g59970.1",-1.4376144,-0.60220146,-2.0459828,-1.3619329,0.030423852,2737,0.030423852,0.0341186736474694,0.0445853380971867,"Yes"]
["Os11g0438700","Os11g0438700","LOC_Os11g25160.1",-1.4011984,-1.6350138,-1.046226,-1.3608128,1.6594843E-3,231,0.001659484,0.00287958115183246,0.0288146767272727,"Yes"]
["Os12g0621300","Os12g0621300","LOC_Os12g42630.1",-1.5731444,-0.94142437,-1.5660238,-1.3601975,0.012733215,1468,0.012733215,0.0182996758912989,0.0347908210933242,"Yes"]
["Os03g0172000","Os03g0172000","LOC_Os03g07580.1",-1.3596959,-1.2018728,-1.5147657,-1.3587781,0.0027545467,390,2.754547E-3,0.00486163051608077,0.0283294564538461,"Yes"]
["Os07g0688500","Os07g0688500","LOC_Os07g48890.1",-1.2710657,-0.9469781,-1.856472,-1.3581719,0.01131189,1352,0.01131189,0.0168536524557466,0.0335591647855029,"Yes"]
["Os01g0318400","Os01g0318400","LOC_Os01g21590.1",-1.5755835,-1.4763155,-1.0208125,-1.3575705,0.031180806,2795,0.031180806,0.0348416853652455,0.044746408896601,"Yes"]
["GT_Os_A_Specific_0098983","Os08g0480050","None",-0.90237904,-1.261827,-1.9083037,-1.3575033,0.029765828,2692,0.029765828,0.0335577162802293,0.0443501991485884,"Yes"]
["Os02g0782600","Os02g0782600","LOC_Os02g54150.1",-1.9494205,-0.75776863,-1.3619108,-1.3563666,0.020218175,2077,0.020218175,0.0258912989279481,0.0390443427660086,"Yes"]
["Os02g0135300","Os02g0135300","LOC_Os02g04240.1",-1.7665696,-0.73500776,-1.5648608,-1.3554794,0.029874025,2705,0.029874025,0.0337197706307653,0.044297491414048,"Yes"]
["Os02g0244700","Os02g0244700","LOC_Os02g14770.1",-1.0520029,-1.3727379,-1.6414251,-1.3553886,0.01906643,3285,0.03985589,0.0409498878085265,0.0486642236803653,"Yes"]
["Os04g0271200","Os04g0271200","LOC_Os04g20280.1",-1.7610326,-0.8725405,-1.4304104,-1.3546611,0.009736557,1204,0.009736557,0.0150087260034904,0.0324363207034883,"Yes"]
["Os11g0181100","Os11g0181100","LOC_Os11g07910.1",-1.2701573,-0.9621506,-1.8306942,-1.354334,0.014084605,1591,0.014084605,0.0198329593617551,0.0355080770930232,"Yes"]
["Os04g0412300","Os04g0412300","LOC_Os04g33640.1",-0.9146681,-1.5250216,-1.6160383,-1.3519093,0.031184822,2796,0.031184822,0.0348541510845175,0.0447361663240343,"Yes"]
["Os01g0720400","Os01g0720400","LOC_Os01g52230.1",-1.0067749,-1.8218126,-1.2261744,-1.3515873,0.025011592,2407,0.025011592,0.0300049862877088,0.041679059207312,"Yes"]
["Os01g0201100","Os01g0201100","LOC_Os01g10440.1",-0.5213928,-1.9406099,-1.5913754,-1.3511261,0.030714193,2755,0.030714193,0.0343430565943655,0.0447167434203266,"Yes"]
["Os06g0187200","Os06g0187200","LOC_Os06g08810.1",-1.7022705,-0.57907057,-1.7515049,-1.344282,0.035624426,3050,0.035624426,0.038020443779606,0.046849040224918,"Yes"]
["Os12g0248600","Os12g0248600","LOC_Os12g14540.1",-1.2678137,-1.4066997,-1.3550954,-1.343203,8.026887e-06,4,8.02689e-06,4.98628770880079e-05,0.0080489639475,"Yes"]
["Os12g0175700","Os12g0175700","LOC_Os12g07670.1",-1.481875,-0.86170864,-1.6787214,-1.3407683,0.006286391,827,0.006286391,0.0103091498379456,0.0304893764220072,"Yes"]
["Os02g0683500","Os02g0683500","LOC_Os02g45850.1",-1.2585597,-1.111465,-1.6520462,-1.3406903,0.040409002,3311,0.040409002,0.0412739965095986,0.0489521313868921,"Yes"]
["Os04g0111900","Os04g0111900","LOC_Os04g02110.1",-1.2309246,-1.0639124,-1.7264624,-1.3404331,0.014596208,1634,0.014596208,0.0203689852904512,0.0358294922203182,"Yes"]
["Os01g0650200","Os01g0650200","LOC_Os01g46169.1",-0.9355421,-1.0644884,-2.0120664,-1.3373656,0.033160586,72,0.000438101,8.97531787584143E-4,0.0244058765416666,"Yes"]
["Os08g0384500","Os08g0384500","LOC_Os08g29570.1",-1.5583191,-1.324398,-1.1291499,-1.337289,0.013892146,1571,0.013892146,0.0195836449763151,0.0354687444977721,"Yes"]
["Os02g0745200","Os02g0745200","LOC_Os02g51119.1",-0.78811216,-1.6559076,-1.5658228,-1.3366143,0.013099666,1501,0.013099666,0.0187110446272749,0.0350051701039307,"Yes"]
["Os03g0188500","Os03g0188500","None",-1.5601139,-0.93599796,-1.5134544,-1.3365221,0.003024767,418,0.003024767,0.00521067065569683,0.0290247378875598,"Yes"]
["Os03g0711400","Os03g0711400","LOC_Os03g50340.1",-1.5980344,-0.7355938,-1.6758056,-1.3364779,0.01355805,2717,0.029993339,0.0338693592620294,0.0442779840739786,"Yes"]
["Os01g0706600","Os01g0706600","LOC_Os01g51030.1",-1.1412425,-1.0573654,-1.8041139,-1.3342406,0.006478047,843,0.006478047,0.0105086013462976,0.030822593733096,"Yes"]
["GT_Os_A_Specific_0038162","Os12g0541250","None",-1.1588349,-1.3254428,-1.5184336,-1.3342371,0.016840458,1813,0.016840458,0.0226003490401396,0.037257075034749,"Yes"]
["Os01g0858000","Os01g0858000","LOC_Os01g63910.1",-0.8865113,-1.3919201,-1.7237988,-1.3340768,0.018330643,1927,0.018330643,0.0240214410371478,0.0381547530217955,"Yes"]
["Os01g0858000","Os01g0857975","None",-0.8865113,-1.3919201,-1.7237988,-1.3340768,0.018330643,2186,0.02174209,0.0272500623285963,0.0398936518709972,"Yes"]
["Os05g0107900","Os05g0107900","LOC_Os05g01730.1",-1.9692297,-1.1148224,-0.9172716,-1.3337746,0.023842402,2333,0.023842402,0.0290825230615806,0.0409909448872696,"Yes"]
["Os10g0557700","Os10g0557700","LOC_Os10g40820.1",-1.1226692,-1.7252207,-1.1486888,-1.3321929,0.030732403,2759,0.030732403,0.0343929194714535,0.0446783865288147,"Yes"]
["Os03g0690500","Os03g0690500","LOC_Os03g48430.1",-1.2439451,-0.90039206,-1.8470683,-1.3304685,0.039413355,3252,0.039413355,0.0405385190725504,0.0486122284455719,"Yes"]
["Os03g0690500","Os05g0442550","LOC_Os05g37070.1",-1.2439451,-0.90039206,-1.8470683,-1.3304685,0.039413355,3253,0.039413355,0.0405509847918224,0.0485972846311097,"Yes"]
["Os03g0721400","Os03g0721400","LOC_Os03g51160.1",-1.9980373,-0.7441249,-1.2489619,-1.3303747,0.021667931,2177,0.021667931,0.0271378708551483,0.0399219436109324,"Yes"]
["Os12g0156400","Os12g0156400","LOC_Os12g06020.1",-1.2464457,-1.085618,-1.6583319,-1.3301319,0.0021981935,1281,0.010529406,0.0159685863874345,0.032969123704918,"Yes"]
["Os12g0556200","Os12g0556200","LOC_Os12g36910.1",-0.7159271,-1.091979,-2.1819258,-1.329944,0.034545157,3207,0.03869561,0.0399775617053103,0.0483966609635173,"Yes"]
["Os07g0108800","Os07g0108800","LOC_Os07g01810.1",-2.0143557,-0.9858022,-0.9894581,-1.329872,0.028471246,2609,0.028471246,0.0325230615806532,0.0437708576872364,"Yes"]
["Os05g0156300","Os05g0156300","LOC_Os05g06430.1",-0.95846176,-1.0909367,-1.9387531,-1.3293839,0.021556392,3264,0.03952883,0.0406881077038145,0.0485754096599264,"Yes"]
["GT_Os_A_Specific_0031025","Os01g0653800","LOC_Os01g46510.1",-0.9712658,-0.9907913,-2.0257525,-1.3292699,0.019779166,1299,0.010762507,0.0161929693343305,0.033232036625866,"Yes"]
["Os01g0852900","Os01g0852900","LOC_Os01g63400.1",-1.3187761,-0.9360156,-1.730895,-1.3285623,0.03107604,2790,0.03107604,0.0347793567688855,0.0446759843870967,"Yes"]
["Os08g0366000","Os08g0366000","LOC_Os08g27840.1",-1.3934007,-0.9659171,-1.622797,-1.3273716,0.012063097,3001,0.034648534,0.0374096235352779,0.0463096534068643,"Yes"]
["Os08g0499300","Os08g0499300","LOC_Os08g38990.1",-0.6533098,-1.5387568,-1.7893577,-1.3271414,0.044182822,2886,0.032613598,0.0359760658189977,0.0453267988835758,"Yes"]
["Os06g0523300","Os06g0523300","LOC_Os06g33200.1",-1.3102427,-1.0389109,-1.632235,-1.3271295,0.006086645,809,0.006086645,0.0100847668910496,0.0301774203893695,"Yes"]
["Os09g0355400","Os09g0355400","LOC_Os09g18594.1",-1.7831998,-1.0903883,-1.1041174,-1.3259019,0.0064907987,850,0.006490799,0.0105958613812016,0.0306289350458823,"Yes"]
["Os08g0158800","Os08g0158800","LOC_Os08g06220.1",-1.4224072,-0.96413374,-1.590375,-1.3256387,0.014153425,1598,0.014153425,0.0199202193966591,0.0355252738892365,"Yes"]
["Os02g0483500","Os02g0483500","LOC_Os02g28170.1",-1.7381811,-1.4296751,-0.80849457,-1.3254503,0.034469225,2989,0.034469225,0.0372600349040139,0.0462549553278688,"Yes"]
["Os09g0565700","Os09g0565700","LOC_Os09g39230.1",-1.5346861,-1.0232191,-1.415442,-1.3244491,0.023001447,2274,0.023001447,0.0283470456245325,0.0405711538773087,"Yes"]
["GT_Os_A_Specific_0148439","Os04g0371200","LOC_Os04g30270.1",-1.790515,-0.7874875,-1.3933926,-1.3237983,0.031763688,2836,0.031763688,0.0353527798553976,0.0449238901861777,"Yes"]
["Os08g0126300","Os08g0126300","LOC_Os08g03290.1",-1.6839061,-0.79541874,-1.491663,-1.3236626,0.008704423,452,0.003250103,0.0056345051109449,0.0288410688783185,"Yes"]
["Os05g0490800","Os05g0490800","LOC_Os05g41180.1",-1.4118123,-0.9233818,-1.6236553,-1.3196164,0.015727716,1718,0.015727716,0.0214161057092994,0.0367193648870779,"Yes"]
["Os12g0101800","Os12g0101800","LOC_Os12g01140.1",-0.8551092,-1.6215181,-1.4814854,-1.3193709,0.03637946,3083,0.03637946,0.0384318125155821,0.0473298780603308,"Yes"]
["Os01g0910500","Os01g0910500","None",-1.27074,-1.4315777,-1.2552238,-1.3191805,0.00021959619,1851,0.017294552,0.0230740463724756,0.0374762010113452,"Yes"]
["Os09g0504800","Os09g0504800","LOC_Os09g32700.1",-1.2273984,-1.0110092,-1.715455,-1.3179542,5.621671E-3,761,5.621671E-3,0.00948641236599352,0.0296301213942181,"Yes"]
["Os09g0568700","Os09g0568700","LOC_Os09g39530.1",-0.8168683,-1.6407433,-1.492445,-1.3166856,0.03529741,3029,0.03529741,0.037758663674894,0.0467408093463189,"Yes"]
["Os03g0859300","Os03g0859300","LOC_Os03g64190.1",-1.7864084,-0.6373091,-1.5247173,-1.316145,0.02552734,2291,0.023190062,0.0285589628521565,0.0406003224277608,"Yes"]
["Os12g0616500","Os12g0616500","LOC_Os12g42200.1",-1.4643879,-1.0480976,-1.4331999,-1.3152285,0.0073102885,945,0.007310289,0.0117801047120418,0.0310281155333333,"Yes"]
["GT_Os_A_Specific_0107090","Os10g0578050","LOC_Os10g42730.1",-0.9375725,-1.3483739,-1.658495,-1.3148137,0.0037045565,515,0.003704557,0.00641984542508102,0.0288523847126213,"Yes"]
["Os07g0541500","Os07g0541500","LOC_Os07g35700.1",-1.1387296,-1.1619539,-1.6409416,-1.3138751,5.3498265E-3,724,0.005349827,9.02518075292944E-3,0.0296383371505524,"Yes"]
["Os10g0495900","Os10g0495900","LOC_Os10g35294.1",-0.91762257,-1.2049751,-1.818388,-1.3136619,0.0120976325,1418,0.012097633,0.0176763899276988,0.0342197503265162,"Yes"]
["Os01g0846800","Os01g0846800","LOC_Os01g62810.1",-1.482996,-0.88430643,-1.5701623,-1.3124882,0.017881608,1885,0.017881608,0.0234978808277237,0.0380494056700265,"Yes"]
["Os08g0416800","Os08g0416800","LOC_Os08g32120.1",-1.3953114,-1.0600786,-1.4774365,-1.3109422,0.0038812007,537,0.003881201,0.00669409124906507,0.0289897527206703,"Yes"]
["Os02g0759400","Os02g0759400","LOC_Os02g52210.1",-0.6763172,-1.0726299,-2.1814737,-1.3101403,0.042381983,3403,0.042381983,0.0424208426826227,0.0499541974178665,"Yes"]
["Os03g0761200","Os03g0761200","LOC_Os03g55330.1",-1.2165294,-0.90695953,-1.8048463,-1.309445,0.01146008,1715,0.015697949,0.0213787085514834,0.0367139786816326,"Yes"]
["Os06g0113900","Os06g0113900","LOC_Os06g02370.1",-1.6819901,-0.8274741,-1.4168234,-1.3087626,0.039786804,1190,0.009563108,0.0148342059336823,0.032233299317647,"Yes"]
["Os06g0176000","Os06g0176000","LOC_Os06g07878.1",-1.2605877,-0.97480774,-1.6885979,-1.3079978,0.0060993843,1525,0.013392535,0.019010221889803,0.0352245625475409,"Yes"]
["Os11g0667600","Os11g0667700","LOC_Os11g44560.1",-1.2865667,-1.1483641,-1.487308,-1.307413,0.040819403,3329,0.040819403,0.0414983794564946,0.0491819241312706,"Yes"]
["Os06g0151800","Os06g0151800","LOC_Os06g05820.1",-1.0437527,-0.9178004,-1.950572,-1.3040417,0.024877062,2395,0.024877062,0.0298553976564447,0.0416625869235908,"Yes"]
["Os01g0685400","Os01g0685400","LOC_Os01g49160.1",-1.3394008,-1.5746856,-0.9964032,-1.3034965,0.03531987,3030,0.03531987,0.037771129394166,0.0467551150396039,"Yes"]
["Os12g0635500","Os12g0635500","LOC_Os12g43880.1",-1.2175851,-0.82088137,-1.8708277,-1.3030981,0.01607779,1749,0.01607779,0.0218025430067314,0.0368713640308747,"Yes"]
["Os02g0666800","Os02g0666800","LOC_Os02g44690.1",-1.4246559,-0.860363,-1.6233263,-1.3027817,0.021943597,2201,0.021943597,0.0274370481176763,0.0399889902621535,"Yes"]
["Os02g0513000","Os02g0513000","LOC_Os02g30900.1",-1.6384168,-0.8847461,-1.3847752,-1.302646,0.03439744,2984,0.03439744,0.0371977063076539,0.0462359691152815,"Yes"]
["Os01g0665900","Os01g0665900","LOC_Os01g47570.1",-1.0902805,-1.4040523,-1.4122548,-1.3021959,2.403007E-3,330,2.403007E-3,0.00411368735976065,0.0292074578090909,"Yes"]
["Os03g0787000","Os03g0787000","LOC_Os03g57310.1",-1.3161845,-1.1940103,-1.391635,-1.30061,0.0045720786,633,0.004572079,0.00789080029917726,0.0289709460805687,"Yes"]
["Os08g0440300","Os08g0440300","LOC_Os08g34170.1",-0.6442952,-1.8080616,-1.4485776,-1.3003114,0.03373022,2948,0.03373022,0.0367489404138618,0.0458927789755766,"Yes"]
["Os10g0419400","Os10g0419400","LOC_Os10g28350.1",-1.5902376,-0.9678583,-1.3369789,-1.2983583,0.00550584,749,0.00550584,0.00933682373472949,0.0294845450467289,"Yes"]
["Os06g0251100","Os06g0251100","LOC_Os06g14050.1",-0.89160824,-1.3215771,-1.674015,-1.2957335,0.032970604,2903,0.032970604,0.0361879830466217,0.0455546306042025,"Yes"]
["Os01g0293200","Os01g0293200","LOC_Os01g18880.1",-1.2104244,-0.96476173,-1.7077894,-1.2943252,4.8469626E-3,667,0.004846963,0.00831463475442533,0.02914717929985,"Yes"]
["Os05g0552300","Os05g0552300","LOC_Os05g47890.1",-1.4609108,-0.75324917,-1.6665268,-1.2935623,0.03426259,2621,0.028615795,0.0326726502119172,0.0437916649160625,"Yes"]
["Os01g0390400","Os01g0390400","LOC_Os01g29409.1",-0.71728134,-1.1994882,-1.9611621,-1.2926439,0.024049183,2350,0.024049183,0.0292944402892046,0.0410473502182978,"Yes"]
["Os01g0757500","Os01g0757500","LOC_Os01g55270.1",-1.3903065,-0.6734228,-1.8127241,-1.2921511,0.018384641,2256,0.022700706,0.0281226626776365,0.0403601647898936,"Yes"]
["Os05g0176500","Os05g0176500","LOC_Os05g08410.1",-1.1504045,-0.88026524,-1.8423433,-1.2910043,0.014837398,2851,0.03202884,0.0355397656444776,0.0450605672535952,"Yes"]
["Os03g0819900","Os03g0819900","LOC_Os03g60530.1",-1.5832481,-1.1532869,-1.1357341,-1.2907563,0.0050471444,93,0.000563224,1.15931189229618E-3,0.0242913060645161,"Yes"]
["GT_Os_A_Specific_0037916","Os05g0494200","LOC_Os05g41460.1",-0.9889374,-1.1747637,-1.7044344,-1.2893785,0.015519119,1155,0.009243928,0.0143979057591623,0.0321016408727272,"Yes"]
["Os06g0567000","Os06g0567000","LOC_Os06g37070.1",-1.0571499,-1.2095747,-1.5994854,-1.2887367,0.018757973,1958,0.018757973,0.0244078783345799,0.0384260621567926,"Yes"]
["Os10g0407200","Os10g0407200","LOC_Os10g26700.1",-1.0244346,-1.2342324,-1.6063466,-1.2883378,0.013882807,1569,0.013882807,0.0195587135377711,0.0354900821395793,"Yes"]
["Os12g0104800","Os12g0104800","LOC_Os12g01390.1",-1.9058309,-0.53344727,-1.4200029,-1.286427,0.030395484,2161,0.021481168,0.0269384193467963,0.0398708768385006,"Yes"]
["GT_Os_A_Specific_0117021","Os01g0721300","LOC_Os01g52330.1",-1.6843824,-0.8004112,-1.3733788,-1.2860575,0.037069764,3136,0.037069764,0.0390924956369982,0.0474128901160714,"Yes"]
["Os04g0671200","Os04g0671200","LOC_Os04g57550.1",-1.1133614,-1.1406031,-1.6005478,-1.2848374,0.001993904,280,0.001993904,0.00349040139616055,0.0285626747999999,"Yes"]
["GT_Os_A_Specific_0268494","Os10g0492101","LOC_Os10g35010.1",-0.94882345,-1.4972363,-1.406281,-1.2841135,0.03326479,2917,0.03326479,0.0363625031164298,0.0457405117209461,"Yes"]
["Os11g0604700","Os11g0604700","LOC_Os11g39140.1",-1.2989459,-0.83479404,-1.7185373,-1.2840924,0.010853448,1315,0.010853448,0.0163924208426826,0.0331050797931558,"Yes"]
["Os05g0378900","Os05g0378900","LOC_Os05g31490.1",-0.9657502,-1.0090303,-1.8755779,-1.2834529,0.017789494,2080,0.020239377,0.0259286960857641,0.0390289140129807,"Yes"]
["Os12g0297500","Os12g0297500","LOC_Os12g20150.1",-1.1683469,-1.1114373,-1.5695596,-1.2831146,0.0019718774,277,0.001971877,0.00345300423834455,0.0285530637075812,"Yes"]
["Os09g0339000","Os09g0339000","LOC_Os09g16950.1",-0.50878716,-1.952312,-1.384388,-1.281829,0.03394923,2962,0.03394923,0.0369234604836699,0.045972438058744,"Yes"]
["Os02g0749500","Os02g0749500","LOC_Os02g51430.1",-1.0293703,-1.1453362,-1.6656156,-1.2801074,0.0058103385,783,0.005810339,0.00976065818997756,0.0297640737279693,"Yes"]
["GT_Os_A_Specific_0462913","Os11g0703900","LOC_Os11g47760.1",-1.0027122,-0.9243574,-1.912673,-1.2799143,0.020924993,340,0.002470829,0.00423834455248067,0.0291485150558823,"Yes"]
["Os02g0433600","Os02g0433600","LOC_Os02g23823.1",-1.019351,-1.2623277,-1.555399,-1.2790259,0.025251664,2744,0.030507112,0.0342059336823734,0.0445933040204081,"Yes"]
["Os08g0461300","Os08g0461300","LOC_Os08g35930.1",-1.1377873,-0.8565397,-1.8427343,-1.2790204,0.012884546,1478,0.012884546,0.0184243330840189,0.0349661123179972,"Yes"]
["Os01g0172100","Os01g0172100","LOC_Os01g07730.1",-1.5026488,-0.989234,-1.333199,-1.2750273,0.038123976,3176,0.038123976,0.0395911244078783,0.0481471246020151,"Yes"]
["Os03g0227000","Os03g0227000","LOC_Os03g12590.1",-1.3167567,-0.9108019,-1.5970345,-1.2748643,0.0030613178,422,0.003061318,0.00526053353278484,0.0290970296161137,"Yes"]
["Os07g0569000","Os07g0569000","LOC_Os07g38160.1",-1.3957043,-0.77303696,-1.6498818,-1.2728744,0.019514289,2010,0.019514289,0.025056095736724,0.0389412005865671,"Yes"]
["Os07g0197100","Os07g0197100","LOC_Os07g09890.1",-0.8085184,-1.523139,-1.4745574,-1.2687383,0.021117736,2266,0.022867102,0.0282473198703565,0.0404765869911738,"Yes"]
["Os12g0226700","Os12g0226700","LOC_Os12g12560.1",-1.1889191,-0.9680872,-1.6488609,-1.2686224,0.02769672,2577,0.02769672,0.0321241585639491,0.0431088645401629,"Yes"]
["Os11g0703100","Os11g0703100","LOC_Os11g47680.1",-1.3060131,-1.2124128,-1.2862277,-1.2682179,0.0042652683,586,4.265268E-3,0.00730491149339317,0.0291945220955631,"Yes"]
["Os07g0673900","Os07g0673900","LOC_Os07g47670.1",-1.3677807,-0.944891,-1.4833555,-1.2653424,0.024449851,2375,0.024449851,0.0296060832710047,0.0412919378362105,"Yes"]
["Os04g0572100","Os04g0572100","None",-1.0011063,-0.9488864,-1.8459082,-1.2653003,0.021594692,2169,0.021594692,0.0270381451009723,0.0399337527026279,"Yes"]
["Os08g0542100","Os08g0542100","LOC_Os08g42920.1",-2.0006995,-0.558537,-1.2364025,-1.265213,0.04084093,3331,0.04084093,0.0415233108950386,0.049178315890123,"Yes"]
["Os09g0346400","Os09g0346400","LOC_Os09g17730.1",-0.9272394,-1.033514,-1.8331728,-1.2646421,0.01164404,1869,0.017578006,0.0232984293193717,0.0377235859101123,"Yes"]
["Os03g0564200","Os03g0564200","LOC_Os03g36630.1",-0.49412537,-1.3500929,-1.948175,-1.2641311,0.03760315,3149,0.03760315,0.0392545499875342,0.0478965495871705,"Yes"]
["Os01g0355500","Os01g0355500","LOC_Os01g25320.1",-0.9749012,-1.4552178,-1.3579264,-1.2626818,0.010431101,1270,0.010431101,0.0158314634754425,0.0329442095362204,"Yes"]
["Os06g0667100","Os06g0667100","LOC_Os06g45640.1",-1.6760845,-0.7268162,-1.3833675,-1.2620894,0.031058004,1142,0.009139564,0.0142358514086262,0.0321005176917688,"Yes"]
["Os04g0672100","Os04g0672100","LOC_Os04g57630.1",-1.3214011,-0.69251204,-1.7702208,-1.2613779,0.035340972,3032,0.035340972,0.03779606083271,0.0467521895422163,"Yes"]
["Os08g0176900","Os08g0176900","LOC_Os08g07970.1",-1.410953,-0.8099265,-1.5614362,-1.2607719,0.039786655,3279,0.039786655,0.0408750934928945,0.0486685798124428,"Yes"]
["Os01g0734000","Os01g0734000","LOC_Os01g53260.1",-0.6745181,-1.5670905,-1.5379157,-1.2598414,0.019368889,1996,0.019368889,0.0248815756669159,0.0389221511918837,"Yes"]
["Os06g0109400","Os06g0109400","LOC_Os06g01980.1",-1.3069935,-1.2061167,-1.2654319,-1.259514,0.0004521661,75,0.000452166,0.000934928945400149,0.02418183768,"Yes"]
["Os01g0860800","Os01g0860800","LOC_Os01g64170.1",-1.7981558,-0.78697586,-1.1933603,-1.2594973,0.02983754,2702,0.02983754,0.0336823734729493,0.0442925140414507,"Yes"]
["Os08g0431800","Os08g0431800","None",-1.7068439,-0.8651409,-1.2061653,-1.2593833,0.00936719,1169,0.00936719,0.0145724258289703,0.0321401189820359,"Yes"]
["Os07g0694700","Os07g0694700","LOC_Os07g49400.1",-1.2275763,-1.0174174,-1.5315304,-1.2588414,0.010543825,1284,0.010543825,0.0160059835452505,0.0329371355724299,"Yes"]
["Os04g0487300","Os04g0487300","LOC_Os04g41040.1",-1.1114902,-0.6716442,-1.9923978,-1.2585107,0.030473923,2740,0.030473923,0.0341560708052854,0.0446098193989051,"Yes"]
["Os01g0127900","Os01g0127900","LOC_Os01g03710.1",-1.24966,-1.0263,-1.4965334,-1.2574978,0.0067335204,877,0.00673352,0.0109324358015457,0.0307960646750285,"Yes"]
["Os01g0356000","Os01g0356400","LOC_Os01g25386.1",-1.3987408,-0.5275459,-1.845396,-1.2572275,0.029621022,2682,0.029621022,0.0334330590875093,0.0442990004630872,"Yes"]
["Os08g0139000","Os08g0139000","LOC_Os08g04440.1",-1.4320021,-0.9591036,-1.3766985,-1.2559347,0.028402982,2604,0.028402982,0.0324607329842931,0.043749754532258,"Yes"]
["Os04g0470300","Os04g0470300","LOC_Os04g39450.1",-0.9725361,-0.9143901,-1.875833,-1.254253,0.023337238,2005,0.019471703,0.024993767140364,0.0389531175725685,"Yes"]
["Os03g0120400","Os03g0120400","LOC_Os03g02860.1",-1.0630083,-0.95184135,-1.7469263,-1.2539253,0.011660276,1385,0.011660276,0.0172650211917227,0.0337684960548736,"Yes"]
["Os12g0515600","Os12g0515600","LOC_Os12g33100.1",-0.7505312,-1.1101141,-1.9007959,-1.2538137,0.034471713,2990,0.034471713,0.0372725006232859,0.0462428230244147,"Yes"]
["Os04g0602300","Os04g0602300","LOC_Os04g51320.1",-1.3467488,-0.9780917,-1.4359138,-1.2535847,0.008656835,1093,0.008656835,0.0136250311642981,0.0317681291720036,"Yes"]
["Os10g0578200","Os10g0578200","LOC_Os10g42750.1",-0.9558954,-1.5525227,-1.2500639,-1.2528273,0.0030767424,424,0.003076742,0.00528546497132884,0.0291056890613207,"Yes"]
["Os07g0671200","Os07g0671200","LOC_Os07g47470.1",-1.4264903,-1.4900355,-0.8408642,-1.2524633,0.0077484613,995,0.007748461,0.0124033906756419,0.0312352533376884,"Yes"]
["Os03g0327100","Os03g0327100","LOC_Os03g21030.1",-1.149476,-0.7292576,-1.8783846,-1.2523727,0.036312286,3080,0.036312286,0.0383944153577661,0.0472884997227272,"Yes"]
["Os09g0533600","Os09g0533600","LOC_Os09g36320.1",-1.0188355,-1.9119511,-0.8255434,-1.25211,0.041805387,3377,0.041805387,0.0420967339815507,0.0496539553618596,"Yes"]
["Os03g0136500","Os03g0136500","LOC_Os03g04370.1",-0.9369793,-1.1886377,-1.6261921,-1.2506031,0.005079581,695,0.005079581,0.00866367489404138,0.0293153948071942,"Yes"]
["Os07g0572500","Os07g0572500","LOC_Os07g38480.1",-0.9884715,-1.4142356,-1.3479495,-1.2502189,0.002558859,356,0.002558859,0.00443779606083271,0.0288302905870786,"Yes"]
["Os01g0845100","Os01g0845100","LOC_Os01g62670.1",-0.7832012,-1.0748262,-1.8877449,-1.2485908,0.04085509,3333,0.04085509,0.0415482423335826,0.0491658463816381,"Yes"]
["Os08g0100600","Os08g0100600","None",-0.8045387,-1.2669101,-1.6716676,-1.2477055,0.04011595,3296,0.04011595,0.0410870107205185,0.0488182874544902,"Yes"]
["Os07g0129100","Os07g0129100","None",-0.91867256,-0.9604883,-1.863318,-1.2474929,0.016859023,1815,0.016859023,0.0226252804786836,0.037257047522314,"Yes"]
["Os06g0716700","Os06g0716700","LOC_Os06g50300.1",-1.4940853,-0.55721474,-1.6874409,-1.2462469,0.032553576,3049,0.035598695,0.038007978060334,0.0468305561315185,"Yes"]
["Os05g0528200","Os05g0528200","LOC_Os05g45220.1",-1.441185,-0.8406105,-1.4546218,-1.2454724,0.03515247,3021,0.03515247,0.037658937920718,0.0466721473584905,"Yes"]
["GT_Os_A_Specific_0615691","Os11g0174000","LOC_Os11g07280.1",-1.1418986,-0.6250658,-1.9686723,-1.2452122,0.03304173,2906,0.03304173,0.0362253802044377,0.0456057739263592,"Yes"]
["Os01g0749300","Os01g0749300","LOC_Os01g54550.1",-1.1314449,-1.1811314,-1.421299,-1.2446251,0.021317761,2145,0.021317761,0.0267389678384442,0.0398627223174825,"Yes"]
["Os07g0568600","Os07g0568600","LOC_Os07g38120.1",-0.7415981,-1.3250914,-1.6668882,-1.2445259,0.02140065,2155,0.02140065,0.0268636250311642,0.0398320218793503,"Yes"]
["Os03g0360300","Os03g0360300","LOC_Os03g24560.1",-1.5976143,-0.61964893,-1.5129662,-1.2434098,0.03436728,2983,0.03436728,0.0371852405883819,0.0462109152128729,"Yes"]
["Os08g0189900","Os08g0189900","LOC_Os08g09060.1",-0.7916441,-1.4592099,-1.4764233,-1.2424258,0.012122585,1420,0.012122585,0.0177013213662428,0.0342420341091549,"Yes"]
["GT_Os_A_Specific_0238528","Os11g0127951","None",-1.1121249,-1.6059151,-1.0036535,-1.2405645,0.0039365427,548,0.003936543,0.00683121416105709,0.028812908709854,"Yes"]
["Os01g0730200","Os01g0730200","LOC_Os01g52980.1",-0.8289275,-0.9999471,-1.8880239,-1.2389661,0.025386196,2425,0.025386196,0.0302293692346048,0.0419892916107216,"Yes"]
["Os03g0717900","Os03g0717900","LOC_Os03g50870.1",-1.2368364,-0.95553017,-1.5227661,-1.2383776,0.021224584,2141,0.021224584,0.0266891049613562,0.0397626372835123,"Yes"]
["Os01g0760400","Os01g0760400","LOC_Os01g55530.1",-0.8199029,-1.1747756,-1.7171888,-1.2372891,0.01655306,1785,0.01655306,0.0222513089005235,0.0371956995294117,"Yes"]
["Os04g0430600","Os04g0430600","LOC_Os04g35130.1",-0.9448261,-0.93470764,-1.8313999,-1.2369779,0.016828783,1812,0.016828783,0.0225878833208676,0.0372517928327814,"Yes"]
["Os06g0220800","Os06g0220800","LOC_Os06g11740.1",-1.5070596,-0.74823856,-1.4536815,-1.2363266,0.030743692,2762,0.030743692,0.0344303166292695,0.0446462522128892,"Yes"]
["Os01g0145200","Os01g0145200","LOC_Os01g05180.1",-0.885067,-0.878572,-1.9446268,-1.2360886,0.024169192,607,0.004402334,0.00756669159810521,0.0290902169258649,"Yes"]
["Os11g0246100","Os11g0246100","LOC_Os11g14130.1",-0.7107425,-1.0020723,-1.9954023,-1.2360724,0.040264197,3304,0.040264197,0.0411867364746945,0.048880052713983,"Yes"]
["Os09g0482100","Os09g0482100","LOC_Os09g30412.1",-1.2120905,-1.0559874,-1.4401388,-1.2360722,0.0078471,1004,0.0078471,0.01251558214909,0.031349320816733,"Yes"]
["Os04g0567800","Os04g0567800","LOC_Os04g47990.1",-1.770535,-0.6106863,-1.3252711,-1.2354975,0.027022226,2532,0.027022226,0.031563201196709,0.0428065357369668,"Yes"]
["Os04g0567800","Os02g0673700","LOC_Os02g45200.1",-1.770535,-0.6106863,-1.3252711,-1.2354975,0.027022226,2533,0.027022226,0.031575666915981,0.0427896361966048,"Yes"]
["Os08g0345700","Os08g0345700","LOC_Os08g25720.1",-0.98451424,-1.1422234,-1.5765791,-1.2344389,0.006594882,861,0.006594882,0.0107329842931937,0.0307224990731707,"Yes"]
["Os02g0102900","Os02g0102900","LOC_Os02g01280.1",-1.6975584,-0.67379665,-1.326961,-1.232772,0.023459006,1532,0.013489022,0.019097481924707,0.035316231881201,"Yes"]
["Os10g0545800","Os10g0545800","LOC_Os10g39870.1",-1.0909357,-1.1552534,-1.4498119,-1.2320004,0.006483744,846,0.006483744,0.0105459985041136,0.030740304,"Yes"]
["Os01g0582600","Os01g0582600","LOC_Os01g40070.1",-1.0158153,-1.389319,-1.2894292,-1.2315211,0.008571203,1086,0.008571203,0.0135377711293941,0.0316566254447513,"Yes"]
["Os03g0194500","Os03g0194500","LOC_Os03g09870.1",-1.017827,-0.93692493,-1.7388468,-1.2311996,8.9110965E-3,1124,0.008911097,0.0140114684617302,0.0317992972126334,"Yes"]
["Os01g0928100","Os01g0928100","LOC_Os01g70320.1",-1.1803493,-0.9617739,-1.551125,-1.2310828,0.0021715346,304,2.171535E-3,0.0037895786586886,0.0286514042269736,"Yes"]
["Os02g0134200","Os02g0134200","LOC_Os02g04130.1",-2.0055442,-0.8250246,-0.8619151,-1.2308279,0.030965133,2780,0.030965133,0.0346546995761655,0.0446766721089928,"Yes"]
["Os12g0152700","Os12g0152700","LOC_Os12g05650.1",-1.2307673,-1.2278633,-1.2320595,-1.23023,0.02999641,259,0.00177558,3.22862129144851E-3,0.0274974956756756,"Yes"]
["Os06g0184400","Os06g0184400","LOC_Os06g08540.1",-1.0704241,-1.18648,-1.4327478,-1.229884,4.07728E-4,65,4.07728E-4,0.000810271752680129,0.0251599539692307,"Yes"]
["Os06g0202100","Os06g0202100","LOC_Os06g10100.1",-1.0658913,-1.0123558,-1.5999794,-1.2260755,0.020591173,2105,0.020591173,0.0262403390675642,0.0392357220441805,"Yes"]
["Os01g0180800","Os01g0180800","LOC_Os01g08560.1",-0.86072445,-0.9464884,-1.8693571,-1.2255234,0.018177751,1911,0.018177751,0.0238219895287958,0.0381533015494505,"Yes"]
["Os02g0218200","Os02g0218200","LOC_Os02g12650.1",-0.9616995,-0.70983505,-2.0044165,-1.225317,0.039627273,3268,0.039627273,0.0407379705809025,0.0486367784586903,"Yes"]
["Os02g0763200","Os02g0763200","LOC_Os02g52560.1",-1.7123408,-0.8033743,-1.1575484,-1.2244211,0.012211887,1426,0.012211887,0.0177761156818748,0.034349143588359,"Yes"]
["Os02g0136800","Os02g0136800","LOC_Os02g04420.1",-1.5581226,-0.8177695,-1.2967286,-1.2242069,0.013106857,1502,0.013106857,0.0187235103465469,0.0350010675279627,"Yes"]
["Os02g0817200","Os02g0817200","LOC_Os02g57220.1",-1.0297284,-0.8577094,-1.7838774,-1.2237717,0.02023687,2480,0.026290353,0.0309149837945649,0.0425204055979838,"Yes"]
["Os05g0114800","Os05g0114800","None",-1.2689414,-1.1729431,-1.2290454,-1.2236433,0.01445489,1624,0.01445489,0.0202443280977312,0.0357010860775862,"Yes"]
["GT_Os_A_Specific_0156636","Os11g0704525","None",-1.1245852,-1.0258827,-1.5203104,-1.2235928,0.0044502406,613,0.004450241,0.00764148591373722,0.0291189504910277,"Yes"]
["Os01g0681200","Os01g0681200","LOC_Os01g48910.1",-1.32407,-0.6460986,-1.6962528,-1.2221404,0.022581985,2246,0.022581985,0.0279980054849164,0.0403278458748886,"Yes"]
["Os02g0575000","Os02g0575000","LOC_Os02g36530.1",-1.250083,-1.1961813,-1.2179632,-1.2214092,0.024880612,2396,0.024880612,0.0298678633757167,0.0416511413739566,"Yes"]
["GT_Os_A_Specific_0124322","Os08g0409233","None",-1.9366636,-0.8849783,-0.8425832,-1.2214084,0.03097085,2781,0.03097085,0.0346671652954375,0.0446688526968716,"Yes"]
["Os10g0482000","Os10g0482000","LOC_Os10g34083.1",-1.5107675,-0.6834154,-1.4653687,-1.2198505,0.025681779,2449,0.025681779,0.0305285464971328,0.0420619091747652,"Yes"]
["Os04g0244400","Os04g0244400","LOC_Os04g17050.1",-1.7358441,-0.6485872,-1.2730017,-1.2191443,0.029957157,1780,0.016481817,0.0221889803041635,0.0371396449365168,"Yes"]
["Os01g0690800","Os01g0690800","LOC_Os01g49614.1",-0.59421253,-1.7322426,-1.3305521,-1.2190024,0.024530943,2377,0.024530943,0.0296310147095487,0.041394031288599,"Yes"]
["Os04g0616700","Os04g0616700","LOC_Os04g52640.1",-0.5081763,-1.469224,-1.6790657,-1.218822,0.027269596,2545,0.027269596,0.031725255547245,0.0429777404935167,"Yes"]
["Os08g0390600","Os08g0390600","LOC_Os08g30095.1",-1.4069824,-1.3454933,-0.90065,-1.2177086,0.014358858,1613,0.014358858,0.0201072051857392,0.0357057529063856,"Yes"]
["GT_Os_A_Specific_0095864","Os11g0699532","LOC_Os11g47441.1",-1.0369124,-0.7576246,-1.8557627,-1.2167666,0.023142934,2285,0.023142934,0.0284841685365245,0.0406242049339168,"Yes"]
["Os06g0687700","Os06g0687700","LOC_Os06g47320.1",-1.3867292,-0.7189579,-1.5429611,-1.2162161,0.011786677,1393,0.011786677,0.0173647469458987,0.0339385222160804,"Yes"]
["Os01g0189800","Os01g0189800","LOC_Os01g09420.1",-0.7350702,-1.0168552,-1.8851051,-1.2123436,0.033070944,2908,0.033070944,0.0362503116429818,0.0456147030206327,"Yes"]
["Os06g0708500","Os06g0708500","LOC_Os06g49480.1",-1.4151115,-0.82614803,-1.3946009,-1.2119535,0.004200496,575,0.004200496,0.00716778858140114,0.029301199053913,"Yes"]
["Os05g0522600","Os05g0522600","LOC_Os05g44770.1",-0.88063335,-1.1636763,-1.5913696,-1.2118931,0.015006136,1661,0.015006136,0.0207055597107953,0.0362369726044551,"Yes"]
["Os06g0659100","Os06g0659100","LOC_Os06g44860.1",-1.0043387,-1.1508598,-1.4727974,-1.209332,0.013048833,1495,0.013048833,0.0186362503116429,0.035009277032107,"Yes"]
["Os03g0270500","Os03g0270500","LOC_Os03g16390.1",-1.0207744,-1.1473861,-1.4567294,-1.2082967,2.1311461E-3,299,2.131146E-3,0.00372725006232859,0.0285887177458194,"Yes"]
["Os01g0833700","Os01g0833700","LOC_Os01g61710.1",-1.1388493,-0.8425789,-1.6433201,-1.2082494,0.011017291,3374,0.041740917,0.0420593368237347,0.0496214635705394,"Yes"]
["Os04g0599000","Os04g0599000","LOC_Os04g51050.1",-0.8771262,-1.1892862,-1.5543876,-1.2069334,0.007600865,976,0.007600865,0.0121665420094739,0.031236751552254,"Yes"]
["GT_Os_A_Specific_0085767","Os02g0199200","LOC_Os02g10580.1",-1.4159212,-0.6863241,-1.5176334,-1.2066263,0.0138087245,1565,0.013808725,0.0195088506606831,0.0353909239456869,"Yes"]
["Os11g0191300","Os11g0191300","LOC_Os11g08660.1",-1.2019753,-0.8937993,-1.5218086,-1.2058611,0.008673427,1100,0.008673427,0.0137122911992021,0.0316264688154545,"Yes"]
["Os06g0624900","Os06g0624900","LOC_Os06g41930.1",-1.0039225,-0.76154613,-1.8502407,-1.2052364,0.027138628,2538,0.027138628,0.031637995512341,0.0428892974420803,"Yes"]
["Os06g0159900","Os06g0159900","LOC_Os06g06490.1",-1.4478717,-0.66445446,-1.5028005,-1.2050422,0.026152086,2474,0.026152086,0.0308401894789329,0.0423993601236863,"Yes"]
["Os03g0158500","Os03g0158500","LOC_Os03g06240.1",-1.3653841,-0.75799465,-1.487894,-1.2037576,0.0093225725,1166,0.009322573,0.0145350286711543,0.0320693313061749,"Yes"]
["Os06g0702700","Os06g0702700","LOC_Os06g48960.1",-1.1120844,-0.95369434,-1.5404177,-1.2020655,0.015442884,469,0.003362161,0.00584642233856893,0.0287540037761193,"Yes"]
["Os09g0501200","Os09g0501200","LOC_Os09g32500.1",-1.2342858,-0.7993121,-1.5706644,-1.2014208,0.030726187,2757,0.030726187,0.0343679880329095,0.0447017541011969,"Yes"]
["Os09g0501200","Os09g0501100","None",-1.2342858,-0.7993121,-1.5706644,-1.2014208,0.030726187,2758,0.030726187,0.0343804537521815,0.0446855460685279,"Yes"]
["Os01g0347200","Os01g0347200","LOC_Os01g24490.1",-1.214834,-1.4899178,-0.89640474,-1.2003855,3.4997887E-3,489,0.003499789,6.09573672400897E-3,0.0287068582392638,"Yes"]
["Os03g0113700","Os03g0113700","LOC_Os03g02260.1",-1.1174526,-0.7768698,-1.706171,-1.2001644,0.011893275,1400,0.011893275,0.0174520069808027,0.034074232875,"Yes"]
["Os01g0708600","Os01g0708600","LOC_Os01g51220.1",-1.2665844,-0.92187977,-1.4113517,-1.1999387,1.1726981E-3,176,1.172698E-3,0.00219396659187235,0.0267255208977272,"Yes"]
["Os10g0500700","Os10g0500700","LOC_Os10g35720.1",-1.3558483,-0.5791168,-1.6614594,-1.1988082,0.019614916,2016,0.019614916,0.025130890052356,0.0390255099583333,"Yes"]
["Os03g0262200","Os03g0262200","LOC_Os03g15570.1",-0.6470232,-1.2905111,-1.6576023,-1.1983789,0.015544996,1703,0.015544996,0.0212291199202194,0.0366124362630651,"Yes"]
["Os03g0698400","Os03g0698400","LOC_Os03g49140.1",-1.0723076,-0.6598401,-1.8591971,-1.197115,0.0314899,2814,0.0314899,0.0350785340314136,0.0448848574626865,"Yes"]
["Os05g0150700","Os05g0150733","LOC_Os05g05820.1",-1.0268664,-0.91896677,-1.6436348,-1.1964893,0.010586707,1289,0.010586707,0.0160683121416105,0.0329428097571761,"Yes"]
["Os01g0962400","Os01g0962400","LOC_Os01g73140.1",-1.3275814,-0.81201553,-1.4493914,-1.1963295,0.0038399496,530,3.83995E-3,0.00660683121416105,0.0290604517924528,"Yes"]
["Os12g0613500","Os12g0613500","LOC_Os12g41930.1",-1.305891,-0.72492695,-1.5581665,-1.1963282,0.020067928,2057,0.020067928,0.0256419845425081,0.0391309962119591,"Yes"]
["Os03g0194900","Os03g0194900","LOC_Os03g09900.1",-0.8945589,-1.4523458,-1.2397909,-1.1955652,0.03891776,3224,0.03891776,0.0401894789329344,0.0484178459553349,"Yes"]
["Os03g0314700","Os03g0314700","LOC_Os03g20010.1",-0.7049637,-1.0878334,-1.7933793,-1.1953921,0.029848702,2704,0.029848702,0.0337073049114933,0.0442763105480769,"Yes"]
["Os04g0385900","Os04g0385900","LOC_Os04g31630.1",-1.046135,-1.2351074,-1.2990942,-1.1934456,0.0024537996,337,0.0024538,0.00420094739466467,0.0292053169139465,"Yes"]
["Os02g0689200","Os02g0689200","LOC_Os02g46380.1",-1.2776175,-0.67431736,-1.6277885,-1.1932411,0.022879165,2124,0.020974135,0.0264771877337322,0.0396079357274011,"Yes"]
["Os05g0549000","Os05g0549000","LOC_Os05g47550.1",-1.3286777,-0.5938349,-1.6538205,-1.192111,0.03444133,2988,0.03444133,0.0372475691847419,0.0462329901706827,"Yes"]
["Os01g0710300","Os01g0710300","LOC_Os01g51330.1",-1.3480196,-0.7287235,-1.4968309,-1.1911913,0.034738537,3004,0.034738537,0.0374470206930939,0.0463835791967376,"Yes"]
["Os02g0193000","Os02g0193000","LOC_Os02g09960.1",-1.0409718,-1.3972464,-1.1321096,-1.1901093,0.0069594933,912,0.006959493,0.0113687359760658,0.0306080333585526,"Yes"]
["Os12g0109900","Os12g0109900","LOC_Os12g01916.1",-1.512661,-0.61227083,-1.4447227,-1.1898848,0.018773703,2504,0.026720326,0.0312141610570929,0.0428016084608626,"Yes"]
["Os05g0115100","Os05g0115100","LOC_Os05g02450.1",-0.7889781,-1.4474106,-1.3292112,-1.1885333,0.03797142,3170,0.03797142,0.0395163300922463,0.048045225747634,"Yes"]
["Os10g0518300","Os10g0518300","LOC_Os10g37430.1",-0.6409159,-1.1521883,-1.7696104,-1.1875715,0.022654906,2254,0.022654906,0.0280977312390924,0.0403144755838509,"Yes"]
["Os10g0510500","Os10g0510500","LOC_Os10g36703.1",-1.5147543,-0.55378056,-1.4927912,-1.1871086,0.034331847,2589,0.027892295,0.0322737471952131,0.0432120491483198,"Yes"]
["Os06g0698600","Os06g0698600","LOC_Os06g48330.1",-0.8213935,-1.1192846,-1.6197495,-1.1868092,0.030403282,2736,0.030403282,0.0341062079281974,0.0445714781074561,"Yes"]
["Os03g0296800","Os03g0296800","LOC_Os03g18550.1",-0.71397686,-1.1851473,-1.6589766,-1.1860336,0.04148584,3358,0.04148584,0.0418598853153827,0.0495532174627754,"Yes"]
["Os04g0612600","Os04g0612600","LOC_Os04g52270.1",-0.93751144,-0.90279293,-1.713912,-1.1847388,0.020252025,1709,0.015603919,0.0213039142358514,0.0366221878929198,"Yes"]
["Os06g0652200","Os06g0652200","LOC_Os06g44250.1",-1.0668406,-1.0884933,-1.3968396,-1.1840578,0.0010026939,145,0.001002694,0.00180752929444028,0.0277365905793103,"Yes"]
["Os07g0620500","Os07g0620500","None",-0.6971774,-1.1311903,-1.7226567,-1.1836748,0.01739422,1855,0.01739422,0.0231239092495637,0.0376108983396226,"Yes"]
["Os09g0539200","Os09g0539200","LOC_Os09g36810.1",-1.3608837,-1.081202,-1.105206,-1.1824306,0.013451834,1531,0.013451834,0.019085016205435,0.0352418720927498,"Yes"]
["Os09g0455500","Os09g0455500","LOC_Os09g28230.1",-0.82191753,-1.7378769,-0.9798732,-1.1798892,0.015457158,1695,0.015457158,0.0211293941660433,0.0365773809663716,"Yes"]
["Os03g0836000","Os03g0836000","LOC_Os03g61970.1",-0.6469698,-1.3998032,-1.4910593,-1.1792774,0.02039596,2094,0.02039596,0.0261032161555721,0.0390679061891117,"Yes"]
["Os01g0955100","Os01g0955100","LOC_Os01g72530.1",-1.1547279,-0.887969,-1.4924412,-1.1783794,0.019227406,1984,0.019227406,0.0247319870356519,0.0388715350131048,"Yes"]
["Os02g0552000","Os02g0552000","LOC_Os02g34690.1",-0.880003,-1.0505037,-1.6034479,-1.1779848,0.026110679,2175,0.02164379,0.0271129394166043,0.0399141341103448,"Yes"]
["Os03g0266200","Os03g0266200","LOC_Os03g15950.1",-1.0032482,-0.8259134,-1.7044721,-1.1778779,0.01589715,1731,0.01589715,0.0215781600598354,0.0368362037261698,"Yes"]
["Os06g0551400","Os06g0551400","LOC_Os06g35814.1",-1.0849142,-0.7902174,-1.658,-1.1777105,0.009825921,2582,0.02784275,0.0321864871603091,0.0432522347986057,"Yes"]
["Os04g0611400","Os04g0611400","LOC_Os04g52190.1",-0.5732994,-1.7148867,-1.2427397,-1.1769753,0.031966344,2847,0.031966344,0.0354899027673896,0.0450358292181243,"Yes"]
["Os02g0532500","Os02g0532500","LOC_Os02g32980.1",-0.9541445,-1.0381641,-1.538188,-1.1768322,0.00995528,1226,0.00995528,0.0152829718274744,0.0325698434584013,"Yes"]
["Os01g0215500","Os01g0215500","LOC_Os01g11700.1",-0.78385544,-1.0988326,-1.647058,-1.176582,0.03362205,2943,0.03362205,0.0366866118175018,0.0458233240061162,"Yes"]
["Os06g0542100","Os06g0542100","LOC_Os06g35030.1",-1.4653811,-0.80465555,-1.2561994,-1.175412,0.019910421,2051,0.019910421,0.025567190226876,0.0389374444812286,"Yes"]
["Os05g0245700","Os05g0245700","None",-1.2385893,-0.94793415,-1.3324118,-1.1729784,0.022555629,2245,0.022555629,0.0279855397656444,0.0402987206766147,"Yes"]
["Os08g0560600","Os08g0560600","LOC_Os08g44650.1",-1.3628626,-0.8443961,-1.3101635,-1.172474,0.0047887084,657,4.788708E-3,0.00818997756170531,0.0292351716712328,"Yes"]
["Os09g0452900","Os09g0452900","LOC_Os09g27950.1",-0.9190073,-0.9878111,-1.6100597,-1.1722927,0.008539757,1082,0.008539757,0.0134879082523061,0.0316570844057301,"Yes"]
["Os07g0262200","Os07g0262200","LOC_Os07g15880.1",-1.6137733,-0.6460781,-1.2534456,-1.1710991,0.02462504,1882,0.017816287,0.0234604836699077,0.0379708433352816,"Yes"]
["Os03g0748000","Os03g0748000","LOC_Os03g53670.1",-1.2731304,-0.8045721,-1.4342222,-1.1706415,0.013617828,2936,0.033488564,0.0365993517825978,0.0457502146471389,"Yes"]
["Os04g0468600","Os04g0468600","LOC_Os04g39320.1",-0.86121655,-0.9292879,-1.7151332,-1.1685458,0.029674454,2686,0.029674454,0.0334829219645973,0.0443128201764705,"Yes"]
["Os03g0823700","Os03g0823700","LOC_Os03g60870.1",-0.8683615,-1.0194855,-1.6109743,-1.1662737,0.013060415,1497,0.013060415,0.0186611817501869,0.0349935367835671,"Yes"]
["Os02g0734500","Os02g0734500","LOC_Os02g50150.1",-1.0214744,-0.84712124,-1.6243286,-1.1643081,0.0104600005,1275,0.010460001,0.0158937920718025,0.032905932557647,"Yes"]
["Os02g0734500","Os06g0724600","LOC_Os06g50890.1",-1.0214744,-0.84712124,-1.6243286,-1.1643081,0.0104600005,1993,0.019298922,0.0248441785090999,0.0388399278183642,"Yes"]
["Os12g0162100","Os12g0162100","LOC_Os12g06490.1",-1.0456648,-0.632936,-1.8141677,-1.1642562,0.034759752,3005,0.034759752,0.0374594864123659,0.0463964609890183,"Yes"]
["Os02g0782100","Os02g0782100","LOC_Os02g54110.1",-1.2376733,-0.80732393,-1.4469962,-1.1639978,0.030794146,2766,0.030794146,0.0344801795063575,0.0446548516290672,"Yes"]
["Os04g0521700","Os04g0521700","LOC_Os04g44100.1",-1.3533182,-0.84171486,-1.2920084,-1.1623472,0.004239539,582,0.004239539,0.00725504861630516,0.0292178538298969,"Yes"]
["Os12g0102700","Os12g0102700","LOC_Os12g01220.1",-0.9399934,-0.7835932,-1.7623353,-1.161974,0.020171875,2067,0.020171875,0.0257666417352281,0.0391433916908563,"Yes"]
["Os06g0622800","Os06g0622800","LOC_Os06g41780.1",-1.469748,-0.70189047,-1.3105922,-1.1607436,0.019336576,1995,0.019336576,0.0248691099476439,0.0388766949052631,"Yes"]
["Os07g0674200","Os07g0674200","LOC_Os07g47710.1",-1.2454939,-0.7586546,-1.4774237,-1.1605240000000001,0.020348256,2090,0.020348256,0.0260533532784841,0.03905112670622,"Yes"]
["Os07g0511500","Os07g0511500","LOC_Os07g32730.1",-1.3782153,-0.82090664,-1.2814536,-1.1601919,0.0128121525,1195,9.671575E-3,0.0148965345300423,0.0324624998535564,"Yes"]
["Os07g0542400","Os07g0542400","LOC_Os07g35790.1",-0.79356956,-1.367528,-1.3193359,-1.1601444,0.0077138697,1006,0.007868548,0.012540513587634,0.0313725109622266,"Yes"]
["Os01g0254100","Os01g0254100","LOC_Os01g15020.1",-1.1073065,-1.0614705,-1.307517,-1.1587647,0.000692644,104,0.000692644,1.2964348042882E-3,0.0267134142692307,"Yes"]
["Os11g0528200","Os11g0528200","LOC_Os11g32470.1",-0.8524246,-0.8721528,-1.7497821,-1.1581198,0.035222355,3025,0.035222355,0.037708800797806,0.0467030961669421,"Yes"]
["Os06g0274500","Os06g0274500","LOC_Os06g16330.1",-0.9980321,-1.2910285,-1.1843629,-1.1578078,0.0012531879,190,0.001253188,0.00236848666168037,0.0264554582526315,"Yes"]
["Os01g0574400","Os01g0574400","LOC_Os01g39250.1",-0.8617101,-0.8178892,-1.791894,-1.1571645,0.024177061,2354,0.024177061,0.0293443031662926,0.0411954934881053,"Yes"]
["Os02g0207100","Os02g0207100","LOC_Os02g11680.1",-1.2509303,-0.8236308,-1.39505,-1.156537,0.011821699,1396,0.011821699,0.0174021441037147,0.0339662139606017,"Yes"]
["Os05g0346200","Os05g0346200","LOC_Os05g27930.1",-1.0834026,-0.9395733,-1.444396,-1.1557907,0.04189353,3384,0.04189353,0.0421839940164547,0.0496557177393617,"Yes"]
["Os04g0470500","Os04g0470500","LOC_Os04g39460.1",-1.179431,-1.3041043,-0.98118925,-1.1549082,0.005452331,743,0.005452331,0.00926202941909748,0.0294337814818304,"Yes"]
["Os03g0331900","Os03g0331900","LOC_Os03g21390.1",-1.6887436,-0.71475554,-1.0595889,-1.1543627,0.0288587,2638,0.0288587,0.0328845674395412,0.0438787891205458,"Yes"]
["Os05g0511300","Os05g0511300","LOC_Os05g43560.1",-1.5542989,-0.78834915,-1.1196375,-1.1540952,0.01113244,1338,0.01113244,0.0166791323859386,0.0333723593721973,"Yes"]
["Os05g0580600","Os05g0580600","None",-1.186995,-0.93576336,-1.3377919,-1.1535168,0.004566473,632,0.004566473,7.87833457990526E-3,0.0289812075996835,"Yes"]
["Os04g0372700","Os04g0372700","LOC_Os04g30420.1",-0.65027905,-1.7384567,-1.0702543,-1.1529967,0.03760828,3150,0.03760828,0.0392670157068062,0.0478878765333333,"Yes"]
["GT_Os_A_Specific_0075674","Os01g0547600","LOC_Os01g36720.1",-0.98716354,-0.8051338,-1.6650448,-1.1524473,0.02172228,2182,0.02172228,0.0272001994515083,0.0399303689642529,"Yes"]
["Os09g0407200","Os09g0407200","LOC_Os09g24200.1",-1.5606637,-0.5375695,-1.3573203,-1.1518512,0.022348175,2226,0.022348175,0.0277486910994764,0.0402688813679245,"Yes"]
["Os01g0120800","Os01g0120800","LOC_Os01g03070.1",-1.3241615,-0.65737724,-1.47334,-1.1516262,0.0238502,1010,0.007892194,0.012590376464722,0.0313421684495049,"Yes"]
["GT_Os_A_Specific_0031841","Os07g0564150","None",-0.91271067,-1.3181105,-1.2223415,-1.1510543,0.02792007,2590,0.02792007,0.0322862129144851,0.0432383786756756,"Yes"]
["Os05g0546500","Os05g0546500","LOC_Os05g46845.1",-0.97725487,-0.93229866,-1.5418882,-1.1504806,0.025443621,2429,0.025443621,0.0302792321116928,0.0420149707002881,"Yes"]
["Os10g0516500","Os10g0516500","LOC_Os10g37240.2",-0.8040943,-1.3777838,-1.2590513,-1.1469765,0.0068001207,892,0.006800121,0.0111194215906257,0.0305776741378923,"Yes"]
["Os08g0566900","Os08g0566900","LOC_Os08g45210.1",-1.4554968,-0.9184437,-1.0643959,-1.1461121,0.028565826,2616,0.028565826,0.0326103216155572,0.0437987492683486,"Yes"]
["Os04g0692100","Os04g0692100","LOC_Os04g59560.1",-0.96529007,-0.94174385,-1.5305247,-1.1458529,0.009511369,1187,0.009511369,0.0147968087758663,0.0321399334953664,"Yes"]
["Os03g0114900","Os03g0114900","LOC_Os03g02390.1",-1.359807,-0.9303236,-1.1468611,-1.1456639,0.010019268,1231,0.010019268,0.0153453004238344,0.0326460470739236,"Yes"]
["GT_Os_A_Specific_0174158","Os11g0148600","LOC_Os11g05120.1",-1.3387003,-0.670352,-1.4235897,-1.144214,9.352193E-3,988,0.007676369,0.0123161306407379,0.0311638826508097,"Yes"]
["Os07g0564700","Os07g0564700","LOC_Os07g37750.1",-0.60883904,-1.048605,-1.7740479,-1.1438307,0.02637242,2483,0.02637242,0.0309523809523809,0.0426016015384615,"Yes"]
["Os_A_Specific_0256220","Os01g0343001","None",-0.74720716,-1.480866,-1.2019825,-1.1433519,0.035971537,3067,0.035971537,0.0382323610072301,0.0470433110228236,"Yes"]
["Os10g0456400","Os10g0456400","LOC_Os10g31810.1",-1.8116364,-0.75582695,-0.86198044,-1.143148,0.027933696,2591,0.027933696,0.0322986786337571,0.0432427845063682,"Yes"]
["Os04g0411800","Os04g0411800","LOC_Os04g33590.1",-1.0185833,-0.71287537,-1.6946502,-1.1420363,0.02008344,2062,0.02008344,0.0257043131388681,0.0390662841125121,"Yes"]
["GT_Os_A_Specific_0308141","Os01g0128400","LOC_Os01g03760.1",-1.242168,-0.5473771,-1.6344879,-1.1413443,0.0242087,1733,0.01593829,0.0216030914983794,0.0368889100923254,"Yes"]
["Os02g0634900","Os02g0634900","LOC_Os02g42320.1",-0.77134705,-1.0618668,-1.5904055,-1.1412064,0.02285297,2731,0.030309618,0.0340438793318374,0.0445155173189307,"Yes"]
["Os02g0105900","Os02g0105900","LOC_Os02g01560.1",-1.0674953,-0.6456585,-1.7096586,-1.1409374,0.031467877,2939,0.033528306,0.0366367489404138,0.0457577527614835,"Yes"]
["Os09g0109500","Os09g0109500","LOC_Os09g02170.1",-0.8921728,-0.9048376,-1.6255455,-1.140852,0.011535197,1368,0.011535197,0.0170531039640987,0.0338213999758771,"Yes"]
["Os05g0150300","Os05g0150300","LOC_Os05g05780.1",-1.6658759,-0.64679193,-1.1094532,-1.140707,0.0330975,2912,0.0330975,0.0363001745200698,0.0455886237980769,"Yes"]
["Os02g0597200","Os02g0597200","LOC_Os02g38386.1",-0.91528606,-1.2457314,-1.2595134,-1.1401769,0.0022618463,317,0.002261846,0.00395163300922463,0.0286191303028391,"Yes"]
["Os02g0146600","Os02g0146600","LOC_Os02g05330.1",-0.70666313,-0.99823,-1.7153358,-1.1400763,0.021835752,2319,0.023725742,0.0289080029917726,0.0410366326701164,"Yes"]
["Os05g0471000","Os05g0471000","LOC_Os05g39410.1",-1.0973263,-0.9206009,-1.4016929,-1.1398734,0.0071620867,929,0.007162087,0.0115806532036898,0.0309226382744886,"Yes"]
["Os10g0482900","Os10g0482900","LOC_Os10g34170.1",-1.1532245,-0.86067915,-1.402699,-1.1388675,3.1336793E-3,435,0.003133679,0.00542258788332086,0.028894681537931,"Yes"]
["Os04g0508800","Os04g0508800","LOC_Os04g42980.1",-1.2633133,-0.6328707,-1.5168619,-1.137682,0.026590083,2495,0.026590083,0.0311019695836449,0.04274662241002,"Yes"]
["Os07g0158900","Os07g0158900","LOC_Os07g06500.1",-1.2824907,-0.8045082,-1.3260164,-1.1376718,0.008044049,1027,0.008044049,0.012802293692346,0.0314164367468354,"Yes"]
["Os02g0247800","Os02g0247800","LOC_Os02g14980.1",-0.78750706,-0.92659235,-1.6987824,-1.1376272,0.033738762,2949,0.033738762,0.0367614061331338,0.0458888349888097,"Yes"]
["Os01g0948600","Os01g0948600","LOC_Os01g72009.1",-0.95909977,-0.66606426,-1.7875433,-1.1375691,0.03697974,3127,0.03697974,0.0389803041635502,0.0474338782027502,"Yes"]
["Os03g0810100","Os03g0810100","LOC_Os03g59570.1",-0.7254472,-1.1091075,-1.5780792,-1.1375446,0.018867616,1965,0.018867616,0.0244951383694839,0.0385129810564885,"Yes"]
["GT_Os_A_Specific_0110424","Os03g0293700","LOC_Os03g18250.1",-1.0411263,-1.1699433,-1.2008405,-1.1373034,0.0021621448,302,0.002162145,0.0037646472201446,0.0287164357450331,"Yes"]
["Os02g0769900","Os02g0769900","LOC_Os02g53050.1",-1.0694413,-1.203538,-1.1383963,-1.1371251,0.0073190373,947,0.007319037,0.0118050361505858,0.0309996382333685,"Yes"]
["Os02g0658100","Os02g0658100","LOC_Os02g44080.1",-0.48190308,-1.2730527,-1.6563978,-1.1371179,0.034171447,2973,0.034171447,0.0370605833956619,0.0461021439344096,"Yes"]
["Os06g0354700","Os06g0354700","LOC_Os06g24730.1",-0.9065857,-0.9191923,-1.5826082,-1.1361288,0.029092811,2647,0.029092811,0.0329967589129892,0.0440843464000755,"Yes"]
["Os01g0239100","Os01g0239100","LOC_Os01g13760.1",-0.97997093,-0.78163147,-1.6453886,-1.1356636,0.018759472,1959,0.018759472,0.0244203440538519,0.0384095161776416,"Yes"]
["Os08g0359500","Os08g0359500","LOC_Os08g27070.1",-0.95296097,-0.975502,-1.4779396,-1.1354675,0.013360148,1395,0.011809525,0.0173896783844427,0.0339555589784946,"Yes"]
["GT_Os_A_Specific_0562493","Os08g0137000","LOC_Os08g04260.1",-1.2880301,-0.8286629,-1.2856183,-1.1341038,0.034977682,3017,0.034977682,0.03760907504363,0.046501651475638,"Yes"]
["Os02g0185300","Os02g0185300","LOC_Os02g09250.1",-1.2619243,-0.67050934,-1.4683733,-1.1336023,0.0402197,3303,0.0402197,0.0411742707554225,0.0488408164396003,"Yes"]
["GT_Os_A_Specific_0230243","Os12g0115150","None",-1.0571823,-1.1158876,-1.2246623,-1.1325774,0.004558943,630,0.004558943,0.00785340314136125,0.0290252704333333,"Yes"]
["Os07g0573600","Os07g0573600","LOC_Os07g38600.1",-1.4921241,-0.4908738,-1.4142756,-1.1324245,0.03254923,2883,0.03254923,0.0359386686611817,0.0452844126014568,"Yes"]
["Os07g0637800","Os04g0372201","No hit",-0.59366035,-0.9339242,-1.8674178,-1.1316675,0.03905687,3229,0.03905687,0.0402518075292944,0.0485156722112109,"Yes"]
["Os03g0244700","Os03g0244700","LOC_Os03g14090.1",-1.2752876,-0.61065245,-1.508076,-1.1313387,0.013290226,1518,0.013290226,0.018922961854899,0.0351166643517786,"Yes"]
["Os01g0565900","Os01g0565900","LOC_Os01g38510.1",-0.9084301,-0.81543255,-1.670147,-1.1313366,0.014882974,2183,0.02173839,0.0272126651707803,0.0399416776408612,"Yes"]
["Os07g0509200","Os07g0509200","LOC_Os07g32530.1",-1.2293935,-0.6236391,-1.5389352,-1.1306559,0.030909263,2774,0.030909263,0.0345799052605335,0.0446925212303532,"Yes"]
["Os02g0178400","Os02g0178400","LOC_Os02g08180.1",-1.2643051,-0.86944294,-1.257534,-1.1304274,7.7804998E-3,998,0.0077805,0.0124407878334579,0.031270125751503,"Yes"]
["Os03g0265700","Os03g0265700","LOC_Os03g15900.2",-0.889266,-0.87946415,-1.6210375,-1.1299225,0.009969367,1227,0.009969367,0.0152954375467464,0.0325893488484107,"Yes"]
["Os07g0114000","Os07g0114000","LOC_Os07g02330.1",-1.2393928,-1.070713,-1.0774632,-1.1291896,0.0035467914,495,0.003546791,0.00617053103964098,0.0287397549515151,"Yes"]
["GT_Os_A_Specific_0039297","Os08g0280200","LOC_Os08g17820.1",-0.8127909,-1.6197228,-0.9486065,-1.12704,0.022813424,2262,0.022813424,0.0281974569932685,0.0404529812838196,"Yes"]
["Os05g0417600","Os05g0417600","LOC_Os05g34500.1",-0.9767542,-1.1215687,-1.2807612,-1.1263614,0.0071319416,922,0.007131942,0.0114933931687858,0.0310262682885032,"Yes"]
["Os05g0417600","Os05g0417500","No hit",-0.9767542,-1.1215687,-1.2807612,-1.1263614,0.0071319416,923,0.007131942,0.0115058588880578,0.0309926536966413,"Yes"]
["Os05g0435400","Os05g0435400","LOC_Os05g35970.1",-0.8422842,-0.8728304,-1.6631308,-1.1260818,0.036962826,3126,0.036962826,0.0389678384442782,0.0474273496756237,"Yes"]
["Os07g0291100","Os07g0291100","LOC_Os07g19060.1",-1.2301779,-0.7942028,-1.3489962,-1.1244589,4.6085184E-3,637,0.004608518,0.00794066317626527,0.0290184704835164,"Yes"]
["GT_Os_A_Specific_0095417","Os06g0188950","None",-0.9328213,-1.1892734,-1.2511902,-1.1244283,0.025034938,2408,0.025034938,0.0300174520069808,0.0417006380058139,"Yes"]
["Os10g0413500","Os10g0413500","LOC_Os10g27340.2",-0.6521106,-1.1428075,-1.5771508,-1.124023,0.019404493,1998,0.019404493,0.0249065071054599,0.0389546653768768,"Yes"]
["Os04g0502300","Os04g0502300","LOC_Os04g42380.1",-1.4612117,-0.63122845,-1.2744498,-1.1222967,0.013268074,1516,0.013268074,0.018898030416355,0.0351043831226912,"Yes"]
["Os05g0220100","Os05g0220100","LOC_Os05g13330.1",-0.955183,-1.0073118,-1.4035974,-1.1220307,0.009416692,1176,0.009416692,0.0146596858638743,0.0321176459285714,"Yes"]
["Os08g0504700","Os08g0504700","LOC_Os08g39450.1",-0.5721798,-1.2111301,-1.5825052,-1.1219383,0.036253504,3077,0.036253504,0.0383570181999501,0.0472579800272993,"Yes"]
["Os05g0134000","Os05g0134000","LOC_Os05g04340.1",-1.4506674,-0.6106615,-1.3042693,-1.1218661,0.015412037,1037,0.008128186,0.012926950885066,0.031438914219865,"Yes"]
["Os09g0407900","Os09g0407900","LOC_Os09g24250.1",-1.3645954,-0.67511034,-1.3258328,-1.1218462,0.021232907,2142,0.021232907,0.0267015706806282,0.0397596591862745,"Yes"]
["Os03g0301200","Os03g0301200","LOC_Os03g18910.1",-0.6955662,-1.2239761,-1.445199,-1.1215805,0.016728904,2082,0.020256938,0.0259536275243081,0.0390252537550432,"Yes"]
["Os04g0436800","Os04g0436800","LOC_Os04g35650.1",-1.3973718,-1.0221286,-0.9411874,-1.1202292,0.013098581,1500,0.013098581,0.0186985789080029,0.0350256055939999,"Yes"]
["Os02g0653900","Os02g0653900","LOC_Os02g43700.1",-0.89298916,-1.5625801,-0.9042406,-1.1199366,0.010625683,1528,0.013431875,0.019047619047619,0.035258671875,"Yes"]
["Os05g0111100","Os05g0111100","LOC_Os05g02050.1",-1.4387469,-0.5221944,-1.3962111,-1.1190509,0.03875846,3214,0.03875846,0.0400648217402144,0.0483696898133167,"Yes"]
["Os10g0405300","Os10g0405300","LOC_Os10g26540.1",-1.2363844,-0.59263134,-1.5233803,-1.1174654,0.018537857,1941,0.018537857,0.0241959611069558,0.0383077508639876,"Yes"]
["Os02g0209000","Os02g0209000","LOC_Os02g11830.2",-1.0640278,-0.8058815,-1.4807906,-1.1169,5.6938785E-3,767,0.005693879,0.00956120668162553,0.029775943505867,"Yes"]
["Os03g0852300","Os03g0852300","LOC_Os03g63530.1",-1.3828435,-0.62243223,-1.3442526,-1.1165094,0.020076977,2060,0.020076977,0.0256793817003241,0.0390916285179611,"Yes"]
["Os04g0118500","Os04g0118500","LOC_Os04g02830.1",-0.8736124,-1.0584888,-1.4138651,-1.1153221,0.004125078,565,0.004125078,0.00704313138868112,0.0292844032884955,"Yes"]
["Os12g0425800","Os12g0425800","LOC_Os12g23780.1",-1.0388541,-0.83313084,-1.4716439,-1.114543,0.004410708,609,0.004410708,0.00759162303664921,0.0290498354482758,"Yes"]
["Os03g0321400","Os03g0321400","LOC_Os03g20520.1",-1.0384827,-0.83357334,-1.4696531,-1.113903,0.0052755517,716,0.005275552,0.00892545499875342,0.0295534065251396,"Yes"]
["Os11g0226700","Os11g0226700","LOC_Os11g11940.1",-0.718626,-1.0459218,-1.5756011,-1.1133829,0.02593206,2462,0.02593206,0.0306906008476689,0.0422475599756295,"Yes"]
["Os05g0145400","Os05g0145400","LOC_Os05g05310.1",-1.1265297,-0.97940063,-1.2337761,-1.1132355,1.14727925E-4,20,1.14728E-4,0.000249314385440039,0.0230087004,"Yes"]
["Os08g0509500","Os08g0509500","LOC_Os08g39880.1",-1.2327194,-1.5666084,-0.5359869,-1.1117716,0.019742474,2031,0.019742474,0.025317875841436,0.0389891990221565,"Yes"]
["Os06g0103200","Os06g0103200","LOC_Os06g01350.1",-0.99119806,-1.048759,-1.2900901,-1.1100157,0.0072039827,934,0.007203983,0.0116429818000498,0.0309370190717344,"Yes"]
["Os07g0603800","Os07g0603800","LOC_Os07g41250.1",-1.1217761,-1.1335254,-1.0721655,-1.1091557,0.0031736172,440,0.003173617,0.00548491647968087,0.0289304040613636,"Yes"]
["Os05g0310800","Os05g0310800","None",-0.7728796,-0.887578,-1.6641512,-1.1082029,0.016599664,1795,0.016599664,0.0223759660932435,0.0370926196679665,"Yes"]
["Os03g0833700","Os03g0833700","LOC_Os03g61790.1",-1.2196074,-0.6319189,-1.4725981,-1.1080414,0.032838926,2900,0.032838926,0.0361505858888057,0.0454196317882758,"Yes"]
["Os05g0130600","Os05g0130600","LOC_Os05g04000.1",-1.3333263,-0.5533247,-1.4373465,-1.1079992,0.021602385,2171,0.021602385,0.0270630765395163,0.0399111774458774,"Yes"]
["Os01g0733600","Os01g0733600","LOC_Os01g53250.1",-1.0125751,-0.788033,-1.5227146,-1.1077743,0.0103861885,1265,0.010386189,0.0157691348790825,0.0329320190347826,"Yes"]
["Os01g0626300","Os01g0626300","None",-0.9823656,-0.9047823,-1.435297,-1.1074816,0.013940737,1575,0.013940737,0.0196335078534031,0.0355024102266666,"Yes"]
["Os02g0656500","Os02g0656500","LOC_Os02g43930.1",-1.1243639,-0.7929745,-1.4003334,-1.1058906,0.006713664,874,0.006713664,0.0108950386437297,0.03081064794508,"Yes"]
["Os03g0758800","Os03g0758800","LOC_Os03g55150.1",-0.98400116,-0.8951826,-1.4382296,-1.1058044,0.002896653,787,0.005859941,0.00981052106706557,0.0298655951092757,"Yes"]
["Os06g0318600","Os06g0318600","LOC_Os06g21380.1",-1.3653789,-0.43679667,-1.5137382,-1.1053046,0.039296906,3242,0.039296906,0.0404138618798304,0.048618103012338,"Yes"]
["Os02g0117400","Os02g0117400","LOC_Os02g02530.1",-0.9137192,-0.73677444,-1.6642051,-1.1048995,0.019962768999999998,2053,0.019962768999999998,0.02559212166542,0.0390017859030686,"Yes"]
["Os12g0244200","Os12g0244200","LOC_Os12g14080.1",-1.1592088,-0.5362668,-1.6190023,-1.104826,0.02163591,2173,0.02163591,0.0270880079780603,0.0399363253612517,"Yes"]
["Os09g0447000","Os09g0447000","LOC_Os09g27450.1",-0.6696291,-1.0997572,-1.543325,-1.1042371,0.027202398,2542,0.027202398,0.031687858389429,0.0429224305184893,"Yes"]
["Os10g0452700","Os10g0452700","LOC_Os10g31510.1",-0.58944464,-1.0855851,-1.6375031,-1.1041776,0.023048537,2278,0.023048537,0.0283969085016205,0.0405828278784021,"Yes"]
["GT_Os_A_Specific_0085958","Os10g0560850","None",-0.95272064,-1.2943516,-1.0621185,-1.1030636,0.023671502,2317,0.023671502,0.0288830715532286,0.0409781590513595,"Yes"]
["Os04g0620700","Os04g0620700","LOC_Os04g52960.1",-1.0517454,-0.70677185,-1.5495663,-1.1026945,0.027124917,2535,0.027124917,0.031600598354525,0.0429183597976331,"Yes"]
["Os05g0165400","Os05g0165400","LOC_Os05g07260.1",-1.0317936,-0.82431936,-1.450552,-1.1022216,0.0073685767,955,0.007368577,0.0119047619047619,0.0309480234,"Yes"]
["Os03g0156700","Os03g0156700","LOC_Os03g06090.1",-0.9914465,-0.97381306,-1.3398905,-1.1017166,0.0043391082,596,0.004339108,0.00742956868611318,0.0292016144093959,"Yes"]
["GT_Os_A_Specific_0032111","Os02g0826500","LOC_Os02g58020.1",-0.82357264,-0.9972582,-1.4789948,-1.0999418,0.011480364,1364,0.011480364,0.0170032410870107,0.0337593401788856,"Yes"]
["Os04g0445600","Os04g0445600","LOC_Os04g36790.1",-0.7718563,-1.8004804,-0.7260399,-1.0994588,0.037608527,3151,0.037608527,0.0392794814260782,0.047872993271025,"Yes"]
["Os01g0306900","Os01g0306900","LOC_Os01g20120.1",-0.9317093,-0.82582235,-1.5389233,-1.0988183,0.008751214,1109,0.008751214,0.0138244826726502,0.0316511445933273,"Yes"]
["Os01g0511300","Os01g0511300","LOC_Os01g32800.1",-1.0360742,-0.8175702,-1.4427261,-1.0987902,0.004278774,2391,0.024817351,0.0298055347793567,0.0416321183023839,"Yes"]
["Os11g0143300","Os11g0143300","LOC_Os11g04720.1",-0.79273415,-1.5340519,-0.9688816,-1.0985559,0.012690091,1465,0.012690091,0.0182622787334829,0.0347439965877133,"Yes"]
["Os03g0714100","Os03g0714100","LOC_Os03g50590.1",-1.1918564,-0.92560244,-1.17659,-1.0980163,0.031868234,2844,0.031868234,0.0354525056095736,0.044944967149789,"Yes"]
["Os05g0392700","Os05g0392700","LOC_Os05g32630.1",-0.69238853,-1.1589117,-1.4421797,-1.0978266,0.0229611,2270,0.0229611,0.0282971827474445,0.0405713533480176,"Yes"]
["Os09g0536700","Os09g0536700","LOC_Os09g36600.1",-1.0227404,-1.089438,-1.1801658,-1.097448,0.0035956209,1145,0.009152606,0.0142732485664422,0.0320620983982532,"Yes"]
["Os03g0296300","Os03g0296300","LOC_Os03g18500.1",-1.1330895,-0.7273569,-1.4303675,-1.096938,6.275068E-3,826,6.275068E-3,0.0102966841186736,0.030471304779661,"Yes"]
["Os06g0300800","Os06g0300800","LOC_Os06g19660.1",-1.6812892,-0.5796914,-1.0278225,-1.0962677,0.042096656,3387,0.042096656,0.0422213911742707,0.0498522843861824,"Yes"]
["Os09g0482400","Os09g0482600","None",-0.6663704,-0.88051033,-1.7394733,-1.0954514,0.035361104,1902,0.018093422,0.0237097980553477,0.0381560019148265,"Yes"]
["Os05g0564400","Os05g0564400","LOC_Os05g48980.1",-0.5556021,-1.2124653,-1.5158854,-1.0946509,0.021794794,1931,0.018389653,0.0240713039142358,0.0381982900999482,"Yes"]
["Os03g0269900","Os03g0269900","LOC_Os03g16334.1",-1.4082918,-0.44729233,-1.4263401,-1.0939747,0.029377807,2668,0.029377807,0.0332585390177013,0.0441658110483508,"Yes"]
["Os11g0704700","Os11g0704700","LOC_Os11g47830.1",-1.0442324,-1.0195632,-1.2172418,-1.0936791,0.010452166,1272,0.010452166,0.0158563949139865,0.0329588347688679,"Yes"]
["Os01g0142800","Os01g0142800","LOC_Os01g04950.1",-1.1644316,-0.65052605,-1.4643717,-1.0931097,0.01204582,1412,0.01204582,0.0176015956120668,0.0342179773512747,"Yes"]
["Os06g0720000","Os06g0720000","LOC_Os06g50520.1",-1.5106049,-0.41963387,-1.3473458,-1.0925282,0.03154033,2818,0.03154033,0.0351283969085016,0.0448929253477643,"Yes"]
["Os09g0542000","Os09g0542000","LOC_Os09g37006.1",-0.96550083,-0.5927057,-1.7172313,-1.0918126,0.027862146,2586,0.027862146,0.0322363500373971,0.0432154167076566,"Yes"]
["Os01g0140500","Os01g0140500","LOC_Os01g04730.1",-1.003046,-0.951952,-1.320137,-1.0917116,1.9064186E-3,268,0.001906419,0.00334081276489653,0.0285322634664179,"Yes"]
["osa-miR393","osa-miR393","No hit",-0.7726183,-1.6617584,-0.84053946,-1.0916387,0.03562711,3051,0.03562711,0.038032909498878,0.0468372134414945,"Yes"]
["Os06g0731800","Os06g0731800","LOC_Os06g51510.1",-0.7428484,-1.0899868,-1.4409838,-1.091273,8.487039E-3,1074,8.487039E-3,0.0133881824981301,0.0316960087793296,"Yes"]
["Os03g0648400","Os03g0648400","LOC_Os03g44620.2",-0.7177,-0.9613743,-1.5934372,-1.0908371,0.02358871,2188,0.021800924,0.0272749937671403,0.0399650393802559,"Yes"]
["Os02g0644100","Os02g0644100","LOC_Os02g43020.1",-1.2284079,-0.6346903,-1.4088535,-1.0906506,0.01614083,1753,0.01614083,0.0218524058838194,0.0369314712664004,"Yes"]
["Os06g0156900","Os06g0156900","LOC_Os06g06280.1",-1.5300379,-0.58259344,-1.1585212,-1.0903841,0.023325957,2297,0.023325957,0.0286337571677885,0.0407315687971266,"Yes"]
["Os10g0567600","Os10g0567600","LOC_Os10g41800.1",-1.1959,-1.1186924,-0.9538398,-1.0894774,0.015705202,1717,0.015705202,0.0214036399900274,0.0366881567979033,"Yes"]
["Os06g0134000","Os06g0134000","LOC_Os06g04290.1",-1.1305103,-0.67524815,-1.4614,-1.0890528,0.017062355,1438,0.012430276,0.0179257043131388,0.034671653015299,"Yes"]
["Os03g0825700","Os03g0825700","LOC_Os03g61050.1",-0.5927067,-0.9012995,-1.7693257,-1.0877773,0.036429048,3088,0.036429048,0.0384941411119421,0.0473176526968911,"Yes"]
["Os03g0359700","Os03g0359700","LOC_Os03g24520.1",-1.5767946,-0.69034195,-0.9948778,-1.0873381,0.020212688,2075,0.020212688,0.0258663674894041,0.0390713694303614,"Yes"]
["GT_Os_A_Specific_0017645","Os07g0682850","None",-0.6614094,-1.1201115,-1.4781141,-1.086545,0.012083659,1416,0.012083659,0.0176514584891548,0.0342285001758474,"Yes"]
["Os04g0665800","Os04g0665800","LOC_Os04g57020.1",-0.78036404,-0.84954214,-1.6294403,-1.0864488,0.034695137,3003,0.034695137,0.0374345549738219,0.0463410571118881,"Yes"]
["Os02g0465400","Os02g0465400","LOC_Os02g26650.3",-1.354372,-0.7366743,-1.1681995,-1.0864153,0.016974049,1825,0.016974049,0.0227499376714036,0.0373057044049315,"Yes"]
["Os08g0521400","Os08g0521400","LOC_Os08g41010.1",-0.75994396,-1.2670951,-1.2269647,-1.0846679,0.0043857624,604,0.004385762,0.0075292944402892,0.0291246546059602,"Yes"]
["Os02g0115900","Os02g0115900","LOC_Os02g02410.1",-0.880579,-0.6409416,-1.7320147,-1.0845118,0.030104205,3385,0.041962273,0.0421964597357267,0.0497225042844904,"Yes"]
["Os03g0358000","Os03g0358000","LOC_Os03g24339.1",-1.7663999,-0.6506667,-0.83389664,-1.0836544,0.038319893,3187,0.038319893,0.0397282473198703,0.0482275151625353,"Yes"]
["Os07g0678600","Os07g0678600","LOC_Os07g48100.1",-1.344099,-0.7985716,-1.1074228,-1.0833645,0.0025720007,57,0.000362167,0.000710545998504113,0.0254851199473684,"Yes"]
["Os08g0451400","Os08g0451400","LOC_Os08g35000.1",-1.2965889,-0.7081804,-1.2442021,-1.0829905,0.007816614,720,0.005313107,0.00897531787584143,0.0295984335791666,"Yes"]
["Os07g0452700","Os07g0452700","LOC_Os07g26974.1",-1.2248583,-0.5460596,-1.4778957,-1.0829378,0.03655547,3102,0.03655547,0.0386686611817501,0.0472675661411992,"Yes"]
["Os08g0101800","Os08g0101800","LOC_Os08g01150.1",-0.7201104,-1.2905898,-1.235498,-1.082066,0.011317053,1353,0.011317053,0.0168661181750187,0.0335496670975609,"Yes"]
["Os03g0124800","Os03g0124800","LOC_Os03g03334.1",-1.4432993,-0.40733147,-1.3944855,-1.0817055,0.036111858,3073,0.036111858,0.0383071553228621,0.0471346119225512,"Yes"]
["GT_Os_A_Specific_0053805","Os02g0653850","None",-1.261517,-1.2019162,-0.78097296,-1.0814687,0.019660413,2022,0.019660413,0.025205684367988,0.0389999587255192,"Yes"]
["Os01g0102700","Os01g0102700","LOC_Os01g01307.1",-1.1777744,-0.84595966,-1.2203283,-1.0813541,0.003494047,487,0.003494047,0.00607080528546497,0.0287774589671457,"Yes"]
["Os01g0337500","Os01g0337500","LOC_Os01g23580.1",-0.78435755,-0.9838581,-1.4744258,-1.0808805,0.016318845,1768,0.016318845,0.0220393916728995,0.0370219950763574,"Yes"]
["Os02g0566800","Os02g0566800","LOC_Os02g35870.1",-1.4803143,-0.3465991,-1.415638,-1.0808505,0.041868657,3379,0.041868657,0.0421216654200947,0.0496996694960047,"Yes"]
["Os06g0102700","Os06g0102700","LOC_Os06g01304.1",-1.567183,-0.68956375,-0.9850497,-1.0805988,0.019819524,2041,0.019819524,0.025442533034156,0.0389495888113669,"Yes"]
["Os09g0527500","Os09g0527500","LOC_Os09g35850.1",-0.6053386,-1.2369437,-1.3977671,-1.0800165,0.022741726,2258,0.022741726,0.0281475941161805,0.04039728210186,"Yes"]
["Os04g0685100","Os04g0685100","LOC_Os04g58830.1",-1.3076453,-0.5885153,-1.3429432,-1.0797013,0.029367918,2666,0.029367918,0.0332336075791573,0.0441840656781695,"Yes"]
["Os05g0220900","Os05g0220900","LOC_Os05g13390.1",-0.6386261,-1.2077122,-1.3926344,-1.0796576,0.039895356,3287,0.039895356,0.0409748192470705,0.0486827724113173,"Yes"]
["Os04g0606000","Os04g0606000","LOC_Os04g51660.1",-0.96764755,-1.1796026,-1.0883312,-1.0785271,0.0012000151,182,1.200015E-3,0.00226876090750436,0.0264464844230769,"Yes"]
["Os09g0439600","Os09g0439600","LOC_Os09g26820.1",-0.9017911,-0.8559027,-1.4771633,-1.0782857,0.007984854,1021,0.007984854,0.012727499376714,0.0313685106699314,"Yes"]
["Os09g0242600","Os09g0242600","LOC_Os09g06719.1",-1.5788922,-0.6283455,-1.0273528,-1.0781969,0.022894083,2268,0.022894083,0.0282722513089005,0.04048860975,"Yes"]
["Os07g0636900","Os07g0636900","LOC_Os07g44299.1",-1.2466884,-0.5161624,-1.4706998,-1.0778502,0.01921306,1982,0.01921306,0.0247070555971079,0.0388817273763874,"Yes"]
["Os01g0652600","Os01g0652600","LOC_Os01g46380.1",-0.9477782,-0.8465185,-1.4388433,-1.0777134,0.004196191,574,0.004196191,0.00715532286212914,0.0293221639390243,"Yes"]
["Os03g0113800","Os03g0113800","LOC_Os03g02270.1",-0.7942705,-0.8862095,-1.5507164,-1.0770655,0.021194654,2140,0.021194654,0.0266766392420842,0.0397251201841121,"Yes"]
["Os12g0566300","Os12g0566300","LOC_Os12g37870.1",-1.4025679,-0.78078747,-1.0439844,-1.0757799,0.0060428167,803,0.006042817,0.0100099725754176,0.0301839837945205,"Yes"]
["Os07g0647900","Os07g0647900","LOC_Os07g45360.1",-1.2445335,-0.6871557,-1.2956057,-1.075765,0.017496984,1862,0.017496984,0.0232111692844677,0.0376908715488721,"Yes"]
["Os01g0102500","Os01g0102500","LOC_Os01g01295.1",-1.3252592,-0.9901266,-0.9113736,-1.0755864,0.0027012762,384,0.002701276,0.00478683620044876,0.0282156719687499,"Yes"]
["Os03g0270000","Os03g0270000","LOC_Os03g16350.1",-1.1104951,-0.79585695,-1.318984,-1.075112,0.020389512,2092,0.020389512,0.0260782847170281,0.0390928932275334,"Yes"]
["Os10g0578800","Os10g0578800","LOC_Os10g42780.1",-0.9609709,-0.950408,-1.3137074,-1.0750288,0.034839366,3008,0.034839366,0.037496883570182,0.0464563487453457,"Yes"]
["Os04g0662100","Os04g0662100","LOC_Os04g56670.1",-1.3938217,-0.57650757,-1.2491198,-1.0731497,0.042184066,3390,0.042184066,0.0422587883320867,0.0499115895946902,"Yes"]
["Os01g0621900","Os01g0621900","LOC_Os01g43370.1",-0.7287798,-0.9279299,-1.5590401,-1.0719166,0.02911864,2751,0.030604238,0.0342931937172774,0.0446214462442748,"Yes"]
["Os02g0801600","Os02g0801600","LOC_Os02g55810.1",-1.1608891,-0.9724326,-1.0804806,-1.0712675,0.0042993715,591,0.004299372,0.00736724008975317,0.0291789866192893,"Yes"]
["Os05g0301500","Os05g0301500","LOC_Os05g23600.1",-1.1488094,-0.66207886,-1.4026823,-1.0711902,0.016235806,1376,0.011591046,0.0171528297182747,0.0337875621409883,"Yes"]
["Os03g0780400","Os03g0780400","LOC_Os03g56790.1",-0.7886505,-0.7555828,-1.669074,-1.0711025,0.024313472,3056,0.035737187,0.0380952380952381,0.0469050579374999,"Yes"]
["Os11g0629600","Os11g0629600","LOC_Os11g41170.1",-0.66983557,-1.089314,-1.4515786,-1.0702428,0.01695405,1822,0.01695405,0.0227125405135876,0.0373231034851811,"Yes"]
["Os03g0280000","Os03g0280000","LOC_Os03g17180.1",-0.6202154,-1.1721811,-1.4163609,-1.0695858,0.017073352,1832,0.017073352,0.0228371977063076,0.0373805758034934,"Yes"]
["Os06g0275000","Os06g0275000","LOC_Os06g16370.1",-1.2263451,-0.75000954,-1.2322998,-1.0695515,0.015702816,1716,0.015702816,0.0213911742707554,0.0367039597762237,"Yes"]
["Os06g0232100","Os06g0232100","LOC_Os06g12590.1",-1.0561438,-1.0023084,-1.1497622,-1.0694047,0.0031492312,437,0.003149231,0.00544751932186487,0.0289051843043478,"Yes"]
["Os02g0469200","Os02g0469200","LOC_Os02g26984.1",-1.4016643,-0.7340064,-1.072268,-1.0693129,0.008113066,1035,0.008113066,0.012902019446522,0.0314410702666666,"Yes"]
["GT_Os_A_Specific_0187679","Os09g0240850","None",-0.619534,-0.9402075,-1.6478529,-1.0691981,0.028166238,2598,0.028166238,0.0323859386686611,0.043485288921478,"Yes"]
["Os03g0818800","Os03g0818800","LOC_Os03g60430.1",-1.0201373,-0.815197,-1.3714662,-1.0689335,0.01484076,1648,0.01484076,0.0205435053602592,0.0361203206067961,"Yes"]
["Os11g0104900","Os11g0104933","LOC_Os11g01380.1",-1.0246468,-0.7505293,-1.4313879,-1.0688547,0.009533374,1188,0.009533374,0.0148092744951383,0.0321871743383838,"Yes"]
["Os01g0339900","Os01g0339900","LOC_Os01g23740.1",-0.60120773,-0.95995235,-1.6451826,-1.0687809,0.023918338,2342,0.023918338,0.0291947145350286,0.0409634729795047,"Yes"]
["Os11g0175900","Os11g0175900","LOC_Os11g07470.1",-0.666132,-0.81882906,-1.7206664,-1.0685425,0.032561965,2884,0.032561965,0.0359511343804537,0.0452864221966019,"Yes"]
["Os03g0124000","Os03g0124000","LOC_Os03g03260.1",-0.60976887,-1.34935,-1.2461491,-1.0684227,0.010777966,1300,0.010777966,0.0162054350536025,0.0332541704815384,"Yes"]
["Os05g0556900","Os05g0556900","LOC_Os05g48310.1",-1.3255568,-0.6281233,-1.2490902,-1.0675901,0.03734189,3146,0.03734189,0.0392171528297182,0.0476091293038779,"Yes"]
["Os03g0358100","Os03g0358100","LOC_Os03g24380.1",-0.9674425,-0.6733904,-1.5595922,-1.0668083,0.01740049,1857,0.01740049,0.0231488406881077,0.0375839339741518,"Yes"]
["GT_Os_A_Specific_0111162","Os06g0731750","None",-1.3380294,-0.9865167,-0.87584376,-1.0667967,0.0069402517,910,0.006940252,0.0113438045375218,0.0305904953538461,"Yes"]
["Os03g0728800","Os03g0728800","LOC_Os03g51900.1",-1.0141835,-0.7043967,-1.4818015,-1.0667939,0.025448427,2430,0.025448427,0.0302916978309648,0.0420056134555555,"Yes"]
["Os01g0892800","Os01g0892800","LOC_Os01g66860.2",-1.4445033,-1.283165,-0.47135258,-1.0663403,0.024309615,2363,0.024309615,0.0294564946397407,0.0412635910981802,"Yes"]
["Os01g0148500","Os01g0148500","LOC_Os01g05540.1",-1.2679043,-0.8700628,-1.0601296,-1.0660323,0.0041356566,566,4.135657E-3,0.00705559710795312,0.0293076329098939,"Yes"]
["Os03g0650800","Os03g0650850","LOC_Os03g44800.1",-0.75913906,-1.0381536,-1.4006424,-1.0659784,0.009282723,1161,0.009282723,0.0144727000747943,0.032069769124031,"Yes"]
["Os04g0485000","Os04g0485000","LOC_Os04g40850.1",-0.96451473,-0.7164917,-1.5155706,-1.0655257,0.02034728,3148,0.037594702,0.0392420842682622,0.0479010005470139,"Yes"]
["Os01g0871200","Os01g0871200","LOC_Os01g65080.1",-0.6436844,-1.0869713,-1.4656196,-1.065425,0.036530584,3093,0.036530584,0.0385564697083021,0.047372832985451,"Yes"]
["Os02g0722800","Os02g0722800","LOC_Os02g49090.1",-1.2338943,-0.6334176,-1.3273425,-1.0648848,0.011596853,1378,0.011596853,0.0171777611568187,0.0337554262576197,"Yes"]
["Os11g0433500","Os11g0433500","LOC_Os11g24560.1",-1.1287284,-0.5540495,-1.5110369,-1.0646049,0.023015356,2275,0.023015356,0.0283595113438045,0.04057784304,"Yes"]
["Os07g0170300","Os07g0170300","LOC_Os07g07490.1",-1.4186764,-0.42389774,-1.3509464,-1.0645069,0.038121983,3175,0.038121983,0.0395786586886063,0.048159771279685,"Yes"]
["Os03g0201200","Os03g0201200","LOC_Os03g10410.1",-1.3887916,-0.5582757,-1.2459388,-1.0643353,0.0290043,2644,0.0290043,0.0329593617551732,0.0440000935325264,"Yes"]
["Os03g0297700","Os03g0297700","LOC_Os03g18620.1",-0.7069168,-1.0850983,-1.400403,-1.0641394,0.02584773,2459,0.02584773,0.0306532036898529,0.0421615473891825,"Yes"]
["Os09g0549700","Os09g0549700","LOC_Os09g37740.1",-0.8056946,-1.0509415,-1.3348403,-1.0638255,0.026546488,2494,0.026546488,0.0310895038643729,0.0426936501074578,"Yes"]
["Os03g0241400","Os03g0241400","LOC_Os03g13820.1",-0.68337345,-1.3900638,-1.1171899,-1.0635424,0.016991505,1826,0.016991505,0.0227624033906756,0.0373236180476451,"Yes"]
["Os12g0154600","Os12g0154600","LOC_Os12g05830.1",-1.5232997,-0.5794649,-1.0808334,-1.0611993,0.023842325,2332,0.023842325,0.0290700573423086,0.0410083900407375,"Yes"]
["Os01g0106600","Os01g0106600","LOC_Os01g01680.1",-0.7954941,-0.7269392,-1.6607614,-1.0610648,0.028855454,2637,0.028855454,0.0328721017202692,0.0438904914653014,"Yes"]
["GT_Os_A_Specific_0025652","Os05g0208050","None",-1.0495148,-0.7311635,-1.4009142,-1.0605308,0.017650234,1873,0.017650234,0.0233482921964597,0.0377976981174586,"Yes"]
["Os01g0695800","Os01g0695800","LOC_Os01g50100.1",-1.1112304,-0.7731943,-1.296318,-1.0602475,0.004188587,572,0.004188587,0.00713039142358514,0.0293713679318181,"Yes"]
["Os07g0684000","Os07g0684000","LOC_Os07g48500.1",-0.6860142,-0.97171783,-1.5192108,-1.058981,0.016408755,1778,0.016408755,0.0221640488656195,0.0370166008464566,"Yes"]
["Os05g0156500","Os05g0156500","LOC_Os05g06440.1",-1.1159754,-0.46773052,-1.5930023,-1.0589027,0.038812526,3217,0.038812526,0.0401022188980304,0.0483919930948088,"Yes"]
["Os10g0488100","Os10g0488100","LOC_Os10g34670.1",-1.1250944,-0.5058441,-1.5449886,-1.0586424,0.038125914,3177,0.038125914,0.0396035901271503,0.048134416447592,"Yes"]
["Os01g0836800","Os01g0836800","LOC_Os01g61970.1",-1.1943412,-0.862802,-1.1186314,-1.0585915,0.0046155225,638,0.004615523,0.00795312889553727,0.0290170262586206,"Yes"]
["Os_A_Specific_0161641","Os01g0142950","None",-0.623436,-0.8546605,-1.6962557,-1.0581174,0.042758103,2553,0.027404463,0.031824981301421,0.0430549553830787,"Yes"]
["Os06g0343100","Os06g0343100","LOC_Os06g23530.1",-1.3990974,-0.5785284,-1.1965532,-1.0580597,0.0144469375,1619,0.014446938,0.0201819995013712,0.0357916419505867,"Yes"]
["Os01g0739700","Os01g0739700","LOC_Os01g53750.1",-0.92479897,-0.8170495,-1.4319696,-1.0579394,0.004965961,680,0.004965961,0.00847668910496135,0.0292918670161764,"Yes"]
["Os04g0430100","Os04g0430100","LOC_Os04g35090.1",-1.4158211,-0.5852785,-1.1696005,-1.0569,0.025187176,2413,0.025187176,0.0300797806033408,0.0418672867534189,"Yes"]
["Os01g0542700","Os01g0542700","LOC_Os01g36220.1",-1.5117402,-0.40777206,-1.2501831,-1.0565652,0.038461316,3194,0.038461316,0.0398155073547743,0.0482994171809643,"Yes"]
["GT_Os_A_Specific_0084885","Os05g0108950","None",-0.85027885,-1.1388569,-1.1795402,-1.0562253,0.0037444104,519,0.00374441,0.00646970830216903,0.0289380125433526,"Yes"]
["Os01g0654500","Os01g0654500","LOC_Os01g46610.1",-0.82820225,-0.95653915,-1.3838072,-1.0561829,0.03220508,2873,0.03220508,0.0358140114684617,0.044961564872955,"Yes"]
["Os10g0370400","Os10g0370400","LOC_Os10g22510.1",-1.0053997,-0.825583,-1.3375564,-1.0561796,0.0020797201,295,0.00207972,0.00367738718524058,0.0282771421016949,"Yes"]
["Os02g0726400","Os02g0726400","LOC_Os02g49450.1",-1.1990442,-0.5439329,-1.4240541,-1.055677,0.0401634,3299,0.0401634,0.0411244078783345,0.0488315845407699,"Yes"]
["GT_Os_A_Specific_0061694","Os05g0567900","LOC_Os05g49280.1",-0.9482174,-1.2334332,-0.9846301,-1.055427,0.008872993,1120,0.008872993,0.0139616055846422,0.0317764061812499,"Yes"]
["Os03g0806400","Os03g0806400","LOC_Os03g59160.1",-1.0457053,-0.7697873,-1.3501172,-1.0552033,0.039729297,3273,0.039729297,0.0408002991772625,0.0486875069560036,"Yes"]
["GT_Os_A_Specific_0007634","Os04g0509600","LOC_Os04g43070.1",-0.42986584,-1.1307611,-1.6045485,-1.0550585,0.034847543,3010,0.034847543,0.037521815008726,0.0464363770674418,"Yes"]
["Os02g0182100","Os02g0182100","LOC_Os02g08500.1",-0.9484143,-0.8183851,-1.3978987,-1.0548993,0.014882057,1653,0.014882057,0.0206058339566192,0.0361112707967332,"Yes"]
["Os07g0657200","Os07g0657200","LOC_Os07g46370.1",-0.8976488,-0.9161997,-1.3502874,-1.0547119,0.005973002,172,0.001154128,0.00214410371478434,0.0269139965581395,"Yes"]
["Os04g0486900","Os04g0486900","LOC_Os04g40980.1",-1.3557577,-0.6692147,-1.1368747,-1.053949,0.006634263,866,0.006634263,0.0107953128895537,0.0307275160427251,"Yes"]
["Os05g0148300","Os05g0148300","LOC_Os05g05560.1",-1.1256227,-0.84564114,-1.1880016,-1.0530885,7.049741E-3,919,7.049741E-3,0.0114559960109698,0.0307687825364526,"Yes"]
["Os08g0532500","Os08g0532500","LOC_Os08g42020.1",-1.0987287,-0.5317712,-1.5280879,-1.0528625,0.019996218,2054,0.019996218,0.025604587384692,0.0390481160652385,"Yes"]
["Os11g0543300","Os11g0543300","LOC_Os11g34090.1",-0.92645645,-0.9798198,-1.2477674,-1.0513479,0.011951965,1405,0.011951965,0.0175143355771628,0.0341205207224199,"Yes"]
["Os07g0603500","Os07g0603500","LOC_Os07g41220.1",-0.8284626,-1.2760901,-1.0479074,-1.05082,0.026603444,2496,0.026603444,0.0311144353029169,0.0427509671009615,"Yes"]
["Os02g0572900","Os02g0572900","LOC_Os02g36360.1",-1.1732616,-0.6885867,-1.2897444,-1.0505309,0.014771181,1644,0.014771181,0.0204936424831712,0.0360384470748175,"Yes"]
["Os09g0434900","Os09g0434900","LOC_Os09g26460.1",-0.8890171,-1.0851736,-1.1759348,-1.0500418,4.768563E-3,653,4.768563E-3,0.0081401146846173,0.0292905148437978,"Yes"]
["GT_Os_A_Specific_0001793","Os03g0210883","None",-0.66797733,-1.3508406,-1.1310034,-1.0499405,0.0108255185,1304,0.010825519,0.0162552979306906,0.033298433059049,"Yes"]
["Os01g0184800","Os01g0184800","LOC_Os01g08960.1",-0.74455357,-0.80485725,-1.598361,-1.0492573,0.021315625,2923,0.033327274,0.0364372974320618,0.0457323626459117,"Yes"]
["Os12g0245000","Os12g0245000","LOC_Os12g14140.1",-1.3511286,-0.78794193,-1.001194,-1.0467548,0.023521788,2308,0.023521788,0.0287708800797806,0.0408777693535528,"Yes"]
["Os06g0502900","Os06g0502900","LOC_Os06g30710.1",-0.4931488,-1.1879673,-1.4583092,-1.046475,0.039751638,3278,0.039751638,0.0408626277736225,0.0486405796272117,"Yes"]
["Os03g0349600","Os03g0349600","LOC_Os03g22720.1",-1.4300852,-0.6246166,-1.0830564,-1.0459194,0.022406647,2236,0.022406647,0.0278733482921964,0.0401936767070661,"Yes"]
["Os06g0644100","Os06g0644100","LOC_Os06g43650.1",-0.81205845,-0.98038197,-1.3448725,-1.045771,0.0041635283,568,0.004163528,0.00708052854649713,0.0294012514225352,"Yes"]
["Os10g0501300","Os10g0501300","LOC_Os10g35760.1",-0.9689994,-0.76795864,-1.3992114,-1.0453898,0.018233169,1917,0.018233169,0.0238967838444278,0.0381498387370892,"Yes"]
["Os01g0253300","Os01g0253300","LOC_Os01g14950.1",-0.95887756,-0.8384228,-1.3360729,-1.0444578,0.0033806865,1484,0.012924565,0.0184991273996509,0.0349329044575471,"Yes"]
["Os05g0519400","Os05g0519400","LOC_Os05g44310.1",-0.8579178,-0.8335676,-1.4404402,-1.0439752,0.008745295,1108,0.008745295,0.0138120169533782,0.0316582836146209,"Yes"]
["GT_Os_A_Specific_0028854","Os06g0184766","LOC_Os06g08560.1",-1.192111,-0.78528357,-1.1536703,-1.0436883,3.6985765E-3,514,0.003698577,0.00640737970580902,0.028861852815175,"Yes"]
["Os12g0515500","Os12g0515500","LOC_Os12g33090.1",-1.1853864,-0.4387746,-1.5057368,-1.0432993,0.027132193,2537,0.027132193,0.031625529793069,0.0428960292167914,"Yes"]
["Os07g0691800","Os07g0691800","LOC_Os07g49150.1",-1.1054678,-0.75237083,-1.2709293,-1.0429226,0.006738187,773,0.005772723,0.00963600099725754,0.0299539352561448,"Yes"]
["Os01g0805100","Os01g0805100","LOC_Os01g59070.1",-1.5012221,-0.51611185,-1.1091843,-1.0421728,0.03652989,3092,0.03652989,0.0385440039890301,0.0473872538130659,"Yes"]
["Os11g0210300","Os11g0210300","LOC_Os11g10480.1",-0.5560112,-1.0403233,-1.5293689,-1.0419011,0.020076586,2058,0.020076586,0.0256544502617801,0.0391288563877551,"Yes"]
["Os04g0636100","Os04g0636100","LOC_Os04g54360.1",-0.9022198,-0.94316196,-1.2785983,-1.0413266,0.0017515111,253,0.001751511,0.0031538269758165,0.0277680261699604,"Yes"]
["Os03g0843100","Os03g0843100","LOC_Os03g62600.1",-1.050252,-0.588325,-1.4829125,-1.0404965,0.018028101,1892,0.018028101,0.0235851408626277,0.0382191929762156,"Yes"]
["GT_Os_A_Specific_0079016","Os06g0207950","None",-0.64992046,-1.2698402,-1.2009788,-1.0402465,0.028814258,2635,0.028814258,0.0328471702817252,0.0438610963332068,"Yes"]
["Os01g0104800","Os01g0104800","LOC_Os01g01510.1",-1.0776448,-0.57732964,-1.464098,-1.0396909,0.03397853,2966,0.03397853,0.0369733233607579,0.0459500619790964,"Yes"]
["Os02g0256000","Os02g0256000","None",-1.0820122,-1.2217121,-0.8153105,-1.0396782,0.023184106,2290,0.023184106,0.0285464971328845,0.0406076197231441,"Yes"]
["Os03g0281500","Os03g0281500","LOC_Os03g17300.1",-0.58858204,-1.2853127,-1.2441034,-1.0393327,0.01090692,1319,0.01090692,0.0164422837197706,0.0331672904624715,"Yes"]
["Os07g0233300","Os07g0233300","LOC_Os07g12910.1",-0.8088932,-0.86448383,-1.4424748,-1.0386173,0.018119661,1904,0.018119661,0.0237347294938918,0.0381711976213235,"Yes"]
["Os09g0408900","Os09g0408900","LOC_Os09g24330.1",-0.761322,-1.3744435,-0.9800272,-1.0385976,6.7132907E-3,873,0.006713291,0.0108825729244577,0.0308442270343642,"Yes"]
["Os04g0305500","Os12g0432301","None",-0.43777466,-1.5991316,-1.0772481,-1.0380515,0.036601108,3284,0.039846282,0.0409374220892545,0.0486673072783191,"Yes"]
["Os07g0690900","Os07g0690900","LOC_Os07g49080.1",-0.91871595,-1.2927599,-0.900661,-1.0373789,0.014233123,1601,0.014233123,0.0199576165544751,0.0356583737370393,"Yes"]
["Os05g0437200","Os05g0437200","LOC_Os05g36110.1",-0.75879383,-1.0402842,-1.3093014,-1.0361265,0.025459023,3046,0.035528407,0.037970580902518,0.0467841235971766,"Yes"]
["Os12g0562900","Os12g0562900","LOC_Os12g37590.1",-1.322197,-0.7095785,-1.0760603,-1.0359453,0.006539851,1103,0.008714198,0.0137496883570182,0.0316887109501359,"Yes"]
["Os06g0195900","Os06g0195900","LOC_Os06g09570.1",-1.2436676,-0.77330875,-1.0907259,-1.0359007,0.0020749776,294,0.002074978,0.00366492146596858,0.0283086284285714,"Yes"]
["Os07g0246200","Os07g0246200","LOC_Os07g14270.1",-0.93451595,-0.6329651,-1.5401869,-1.0358893,0.020819254,2220,0.022240473,0.0276738967838444,0.0401831248662162,"Yes"]
["GT_Os_A_Specific_0343860","Os03g0246800","LOC_Os03g14260.1",-0.68865347,-1.1818686,-1.2355204,-1.0353475,0.0055577084,1264,0.010383911,0.0157566691598105,0.0329508441621835,"Yes"]
["Os08g0250900","Os08g0250900","LOC_Os08g15230.1",-1.2143745,-0.77366066,-1.116498,-1.0348444,0.011972777,1406,0.011972777,0.0175268012964348,0.0341556248556187,"Yes"]
["Os02g0757900","Os02g0757900","LOC_Os02g52140.1",-0.9976721,-0.8641901,-1.2414618,-1.0344414,0.0138098495,1566,0.01380985,0.0195213163799551,0.0353712058429118,"Yes"]
["Os10g0381800","Os10g0381800","LOC_Os10g24020.1",-1.0393853,-0.9044666,-1.1585617,-1.0341378,0.026916344,2524,0.026916344,0.031463475442533,0.0427739523708399,"Yes"]
["Os08g0162800","Os08g0162800","LOC_Os08g06550.1",-0.76025105,-1.4014683,-0.9405775,-1.034099,0.017401531,1858,0.017401531,0.0231613064073797,0.0375659530898815,"Yes"]
["Os12g0163600","Os12g0163600","LOC_Os12g06650.1",-0.77728033,-0.9517627,-1.3721051,-1.0337161,0.030912966,2776,0.030912966,0.0346048366990775,0.044665672415706,"Yes"]
["Os04g0501000","Os04g0501000","LOC_Os04g42270.1",-1.0219059,-0.845561,-1.2307291,-1.032732,0.012649459,1452,0.012649459,0.0181002243829468,0.0349428237252066,"Yes"]
["Os01g0310800","Os01g0310800","LOC_Os01g20900.1",-0.668355,-0.7228098,-1.7069185,-1.0326945,0.035184428,3022,0.035184428,0.03767140363999,0.0466991200225016,"Yes"]
["Os05g0464300","Os05g0464300","LOC_Os05g38880.1",-1.4412045,-0.59159565,-1.0646238,-1.0324746,0.031516116,2816,0.031516116,0.0351034654699576,0.0448903200553977,"Yes"]
["Os10g0491100","Os10g0491100","None",-1.2251263,-0.75492,-1.11657,-1.0322055,0.004872384,670,0.004872384,0.00835203191224133,0.0291688540656716,"Yes"]
["Os03g0126900","Os03g0126900","LOC_Os03g03520.1",-0.9656477,-0.70547676,-1.4238863,-1.0316702,0.021399617,2153,0.021399617,0.0268386935926202,0.0398670988327914,"Yes"]
["Os08g0250700","Os08g0250700","LOC_Os08g15204.1",-0.9670658,-0.7375717,-1.3874793,-1.0307056,0.0054956344,746,0.005495634,0.00929942657691348,0.0295482412520107,"Yes"]
["Os02g0122300","Os02g0122300","LOC_Os02g02990.1",-0.81539345,-0.87323,-1.4019957,-1.0302063,0.009587669,1193,0.009587669,0.0148716030914983,0.032234820082984,"Yes"]
["Os09g0570600","Os09g0570600","LOC_Os09g39700.1",-0.746058,-0.90731,-1.4346037,-1.0293239,0.0150479,1663,0.0150479,0.0207304911493393,0.0362941232110643,"Yes"]
["Os03g0851300","Os03g0851300","LOC_Os03g63430.1",-0.5806341,-1.0153894,-1.4902468,-1.0287567,0.025362283,2423,0.025362283,0.0302044377960608,0.0419843652963268,"Yes"]
["Os03g0669000","Os03g0669000","LOC_Os03g46610.1",-1.0018177,-0.5126562,-1.5710664,-1.0285134,0.032068204,2856,0.032068204,0.0356020942408377,0.0450369629705882,"Yes"]
["Os01g0120600","Os01g0120600","LOC_Os01g03050.1",-0.82875156,-0.8779907,-1.3772788,-1.028007,0.004349801,599,0.004349801,0.00746696584392919,0.0291269646260434,"Yes"]
["Os07g0239400","Os07g0239400","LOC_Os07g13530.1",-0.8652344,-0.78983974,-1.428124,-1.0277327,0.01267466,1463,0.01267466,0.0182373472949389,0.0347491874641148,"Yes"]
["Os05g0520100","Os05g0520100","LOC_Os05g44380.1",-1.3344316,-0.77718353,-0.97137403,-1.0276631,0.0032959091,462,0.003295909,0.00575916230366492,0.0286144826818181,"Yes"]
["Os03g0640100","Os03g0640100","LOC_Os03g43890.1",-0.69747066,-0.6776104,-1.7058105,-1.0269638,0.037882816,3165,0.037882816,0.0394540014958863,0.0480088388549763,"Yes"]
["Os01g0911200","Os01g0911200","LOC_Os01g68324.3",-0.64927197,-0.84965706,-1.580904,-1.026611,0.020690547,2108,0.020690547,0.0262777362253802,0.03936896775,"Yes"]
["Os03g0657100","Os03g0657100","LOC_Os03g45420.1",-0.731832,-1.1777873,-1.169811,-1.0264767,0.009459524,1181,0.009459524,0.0147220144602343,0.0321271386655376,"Yes"]
["Os06g0693700","Os06g0693700","LOC_Os06g47860.1",-0.6544752,-0.8620548,-1.5628633,-1.0264645,0.026779719,2507,0.026779719,0.031251558214909,0.0428454140043877,"Yes"]
["GT_Os_A_Specific_0074796","Os04g0444100","LOC_Os04g36650.1",-0.67522717,-1.3009977,-1.102953,-1.0263926,0.026111806,2471,0.026111806,0.0308027923211169,0.0423854527988668,"Yes"]
["Os01g0149900","Os01g0149900","LOC_Os01g05660.1",-1.4783115,-0.80812263,-0.7912116,-1.0258819,0.016659949,1797,0.016659949,0.0224008975317875,0.0371858961819699,"Yes"]
["Os12g0210400","Os12g0210400","LOC_Os12g10740.1",-0.62615204,-1.3903503,-1.0591488,-1.025217,0.012398413,1436,0.012398413,0.0179007728745948,0.0346309432750696,"Yes"]
["Os04g0462900","Os04g0462900","LOC_Os04g38900.1",-0.75553656,-1.2215161,-1.0981636,-1.0250721,0.008426293,1067,0.008426293,0.0133009224632261,0.0316755962727272,"Yes"]
["Os03g0151700","Os03g0151700","LOC_Os03g05720.1",-0.9766121,-0.7287588,-1.3684459,-1.0246056,0.034436475,2987,0.034436475,0.0372351034654699,0.0462419488533645,"Yes"]
["Os11g0497000","Os11g0497000","LOC_Os11g30410.1",-1.1366634,-0.6660452,-1.2709727,-1.0245605,0.038542103,3200,0.038542103,0.0398903016704063,0.0483101172290625,"Yes"]
["Os03g0213200","Os03g0213200","LOC_Os03g11450.1",-0.6890321,-0.88958883,-1.4943976,-1.0243396,0.01658226,1793,0.01658226,0.0223510346546995,0.0370950612716118,"Yes"]
["Os06g0198800","Os06g0198800","LOC_Os06g09850.1",-1.2913275,-0.55644894,-1.2244334,-1.0240699,0.014177728,1599,0.014177728,0.0199326851159311,0.03556401939212,"Yes"]
["Os06g0591600","Os06g0591600","LOC_Os06g39140.1",-0.6632023,-1.0451193,-1.3594313,-1.0225843,0.012627565,1448,0.012627565,0.0180503615058588,0.0349787038777624,"Yes"]
["Os08g0374100","Os08g0374100","LOC_Os08g28680.1",-1.0405283,-0.64313126,-1.3828611,-1.0221735,0.012610257,1447,0.012610257,0.0180378957865868,0.0349549003642018,"Yes"]
["Os01g0924800","Os01g0924800","LOC_Os01g70010.1",-1.414505,-0.5070734,-1.1435261,-1.0217015,0.037290625,3142,0.037290625,0.0391672899526302,0.0476042956317632,"Yes"]
["Os05g0110900","Os05g0110900","LOC_Os05g02020.1",-0.9910574,-0.7841816,-1.289381,-1.02154,0.01682666,1811,0.01682666,0.0225754176015956,0.0372676605521811,"Yes"]
["Os07g0187400","Os07g0187400","LOC_Os07g08970.1",-0.7756767,-0.982697,-1.3043771,-1.0209169,0.011383205,1357,0.011383205,0.0169159810521067,0.0336463045357406,"Yes"]
["Os03g0709200","Os03g0709200","LOC_Os03g50150.1",-1.009481,-0.8145642,-1.2362294,-1.0200915,0.03456567,2995,0.03456567,0.0373348292196459,0.04629145321202,"Yes"]
["Os08g0290500","Os08g0290500","LOC_Os08g19374.1",-1.4907708,-0.6478057,-0.9215584,-1.0200449,0.015814396,1727,0.015814396,0.0215282971827474,0.0367293238888245,"Yes"]
["Os03g0651100","Os03g0651100","LOC_Os03g44830.1",-0.9472022,-0.69288254,-1.4194956,-1.0198601,0.021122904,2135,0.021122904,0.0266143106457242,0.0396833573508196,"Yes"]
["GT_Os_A_Specific_0027429","Os03g0735300","LOC_Os03g52490.1",-1.0561438,-0.89266014,-1.1107478,-1.0198506,0.01377849,1564,0.01377849,0.0194963849414111,0.0353360123976982,"Yes"]
["Os07g0555400","Os07g0555400","LOC_Os07g36960.1",-1.2791529,-0.44226456,-1.3372622,-1.0195599,0.021849573,2194,0.021849573,0.0273497880827723,0.0399446842766636,"Yes"]
["Os01g0900900","Os01g0900900","LOC_Os01g67490.1",-0.94604206,-0.9107857,-1.1982269,-1.0183516,0.0074417526,961,0.007441753,0.0119795562203939,0.0310602198574401,"Yes"]
["Os03g0803000","Os03g0803000","LOC_Os03g58840.1",-0.58029556,-0.9097214,-1.5624733,-1.0174967,0.03076182,2764,0.03076182,0.0344552480678135,0.0446402532633863,"Yes"]
["Os03g0794200","Os03g0794200","LOC_Os03g58010.1",-1.0059977,-0.7836771,-1.2618337,-1.0171695,0.009824009,1215,0.009824009,0.0151458489154824,0.0324313581061728,"Yes"]
["Os03g0139100","Os03g0139100","LOC_Os03g04590.1",-0.90338135,-0.8256378,-1.3204489,-1.0164894,0.011414316,1359,0.011414316,0.0169409124906507,0.0336886103576158,"Yes"]
["Os04g0454600","Os04g0454600","LOC_Os04g38260.1",-1.0501285,-0.5641012,-1.4327912,-1.0156736,0.01438497,1617,0.01438497,0.0201570680628272,0.0356821983116883,"Yes"]
["Os01g0974800","Os01g0974800","LOC_Os01g74350.1",-0.8524542,-0.8951616,-1.2984538,-1.0153565,0.03335656,2926,0.03335656,0.0364746945898778,0.0457256193301435,"Yes"]
["Os05g0100300","Os05g0100300","None",-0.6108699,-1.2600589,-1.173686,-1.0148716,0.014267511,1603,0.014267511,0.0199825479930191,0.0356999292707423,"Yes"]
["Os02g0632500","Os02g0632500","LOC_Os02g42134.2",-0.6198597,-0.7784128,-1.6457582,-1.0146769,0.03358462,2942,0.03358462,0.0366741460982298,0.0457878690754588,"Yes"]
["Os04g0224000","Os04g0224000","None",-1.3482375,-0.5661721,-1.1281142,-1.0141746,0.024357675,2369,0.024357675,0.0295312889553727,0.0412404535352469,"Yes"]
["Os03g0137500","Os03g0137500","LOC_Os03g04460.1",-1.6212091,-0.56914616,-0.8517604,-1.0140386,0.038474604,3196,0.038474604,0.0398404387933183,0.048285868787234,"Yes"]
["GT_Os_A_Specific_0066943","Os11g0183150","LOC_Os11g08050.1",-1.007267,-1.4021449,-0.6323962,-1.013936,0.02154858,2166,0.02154858,0.0270007479431563,0.0399036723822714,"Yes"]
["Os10g0157400","Os10g0157400","LOC_Os10g06950.1",-0.7086468,-1.2749081,-1.0550709,-1.0128752,0.018238185,1918,0.018238185,0.0239092495636998,0.0381404379744525,"Yes"]
["Os02g0506500","Os02g0506500","LOC_Os02g30310.1",-0.8094907,-0.7068343,-1.5221386,-1.0128212,0.028506028,2613,0.028506028,0.0325729244577412,0.0437572438989667,"Yes"]
["Os01g0219000","Os01g0219000","LOC_Os01g11970.1",-1.1136012,-0.64851093,-1.2753859,-1.0124993,0.009390253,1173,0.009390253,0.0146222887060583,0.0321093817416879,"Yes"]
["Os04g0581300","Os04g0581300","LOC_Os04g49220.1",-0.9825635,-0.44300365,-1.6117554,-1.0124408,0.041597694,3368,0.041597694,0.0419845425081027,0.049539296506532,"Yes"]
["Os02g0220500","Os02g0220500","LOC_Os02g12794.3",-1.0369444,-0.5600338,-1.4398212,-1.0122665,0.025815941,2457,0.025815941,0.0306282722513089,0.042143972059829,"Yes"]
["Os02g0793100","Os02g0793100","LOC_Os02g55010.1",-1.3086491,-0.5345645,-1.1892223,-1.0108119,0.031202715,2800,0.031202715,0.0349040139616055,0.0446978892375,"Yes"]
["Os01g0858700","Os01g0858700","LOC_Os01g63950.1",-0.855886,-0.88438797,-1.291328,-1.0105339,0.0042079426,576,0.004207943,0.00718025430067314,0.0293021864114583,"Yes"]
["Os08g0528900","Os08g0528900","LOC_Os08g41710.1",-1.2151852,-0.68113804,-1.1337466,-1.0100232,0.014090361,1592,0.014090361,0.0198454250810271,0.035500275107412,"Yes"]
["Os05g0573300","Os05g0573300","LOC_Os05g49770.1",-0.8995495,-0.7294102,-1.4009418,-1.0099672,0.029816607,2700,0.029816607,0.0336574420344053,0.0442942261766666,"Yes"]
["Os03g0237100","Os03g0237100","LOC_Os03g13390.2",-1.0489945,-0.7255888,-1.2482791,-1.0076208,0.028706137,2625,0.028706137,0.0327225130890052,0.043862977336,"Yes"]
["Os11g0463600","Os11g0463600","LOC_Os11g27530.1",-0.938468,-0.84760284,-1.2350578,-1.0070429,0.031733014,2833,0.031733014,0.0353153826975816,0.0449280335877162,"Yes"]
["GT_Os_A_Specific_0040785","Os11g0639600","LOC_Os11g42040.1",-1.4214077,-0.6609497,-0.9376502,-1.0066692,0.029093076,2648,0.029093076,0.0330092246322612,0.0440680996359516,"Yes"]
["Os03g0130500","Os03g0130500","LOC_Os03g03830.1",-0.48127365,-1.0994654,-1.4386024,-1.0064472,0.022084614,2210,0.022084614,0.0275492395911244,0.0400820754542986,"Yes"]
["Os01g0817000","Os01g0817000","LOC_Os01g60110.1",-0.46015167,-1.2780027,-1.2809429,-1.0063658,0.023784295,2327,0.023784295,0.0290077287459486,0.0409964792629995,"Yes"]
["Os03g0792500","Os03g0792500","LOC_Os03g57854.1",-1.3248825,-0.5801687,-1.1116085,-1.0055532,0.025560897,2435,0.025560897,0.0303540264273248,0.0421046233540041,"Yes"]
["Os11g0299300","Os11g0299300","LOC_Os11g19340.1",-1.4540081,-0.8684635,-0.69382143,-1.005431,0.020529134,2101,0.020529134,0.0261904761904761,0.039191983090909,"Yes"]
["Os02g0606800","Os02g0606800","LOC_Os02g39400.1",-0.9043474,-0.77796555,-1.333643,-1.0053186,0.0042818254,587,0.004281825,0.00731737721266517,0.0292579217632027,"Yes"]
["Os03g0267700","Os03g0267700","LOC_Os03g16080.1",-0.85249376,-0.79215527,-1.3712068,-1.0052853,0.022994116,2272,0.022994116,0.0283221141859885,0.040593925737676,"Yes"]
["Os08g0116500","Os08g0116500","LOC_Os08g02340.1",-1.2032042,-0.7135048,-1.0989628,-1.0052239,0.009192323,1151,0.009192323,0.0143480428820742,0.0320333688557775,"Yes"]
["Os07g0642300","Os07g0642300","LOC_Os07g44790.1",-0.62207603,-0.8402796,-1.5517426,-1.0046993,0.034611322,2999,0.034611322,0.0373846920967339,0.0462907677699233,"Yes"]
["Os09g0404700","Os09g0404300","None",-0.89897585,-0.86334753,-1.2516346,-1.0046526,0.027684065,2573,0.027684065,0.0320742956868611,0.0431561541838321,"Yes"]
["Os06g0596300","Os06g0596300","LOC_Os06g39520.2",-0.56956005,-1.1841326,-1.259285,-1.0043259,0.013559871,1541,0.013559871,0.019209673398155,0.0352943819474367,"Yes"]
["Os11g0568500","Os11g0568500","LOC_Os11g36050.1",-0.9735489,-0.7011671,-1.3348994,-1.0032052,0.039480235,3261,0.039480235,0.0406507105459985,0.0485603258463661,"Yes"]
["Os08g0422300","Os08g0422300","LOC_Os08g32660.1",-1.1450925,-0.42138195,-1.4416056,-1.0026933,0.029555947,2679,0.029555947,0.0333956619296933,0.044251177087346,"Yes"]
["Os05g0526600","Os05g0526600","LOC_Os05g45060.1",-0.7446761,-1.1198759,-1.1429753,-1.0025091,0.028423382,2608,0.028423382,0.0325105958613812,0.0437140280682515,"Yes"]
["Os07g0614400","Os07g0614400","LOC_Os07g42290.1",-0.6509671,-1.2881498,-1.0683126,-1.0024766,0.03704962,3134,0.03704962,0.0390675641984542,0.0474173662476068,"Yes"]
["Os02g0208900","Os02g0208900","LOC_Os02g11820.1",-1.0182972,-0.9433985,-1.0453796,-1.0023584,0.0215089,2162,0.0215089,0.0269508850660683,0.039903884320074,"Yes"]
["Os01g0925700","Os01g0925700","LOC_Os01g70130.1",-1.0948706,-0.5513935,-1.3576088,-1.0012909,0.023419576,2304,0.023419576,0.0287210172026925,0.0407707983229166,"Yes"]
["Os02g0592500","Os02g0592500","LOC_Os02g37940.1",-1.294497,-0.59435654,-1.114068,-1.0009738,0.021276694,2144,0.021276694,0.0267265021191722,0.0398044867695895,"Yes"]
["Os03g0747300","Os03g0747300","LOC_Os03g53600.1",-0.9962945,-0.5967908,-1.4095259,-1.0008703,0.0151428245,1667,0.015142825,0.0207803540264273,0.0364354355578884,"Yes"]
["Os03g0360200","Os03g0360200","None",-1.300807,-0.91140366,-0.7898941,-1.0007015,0.009455054,1179,0.009455054,0.0146970830216903,0.032166430529262,"Yes"]
["Os01g0752300","Os01g0752300","LOC_Os01g54870.1",-1.0115604,-0.6589012,-1.3275356,-0.9993324,0.023731397,2321,0.023731397,0.0289329344303166,0.0410110441046962,"Yes"]
["Os12g0131100","Os12g0131100","LOC_Os12g03720.1",-0.70523643,-1.0524254,-1.2398615,-0.9991744,0.031763062,2835,0.031763062,0.0353403141361256,0.0449388506814814,"Yes"]
["Os03g0741700","Os03g0741700","LOC_Os03g53080.1",-0.60212946,-1.1498761,-1.2453237,-0.99910975,0.036552455,3100,0.036552455,0.0386437297432061,0.0472941603241935,"Yes"]
["Os_A_Specific_0042879","Os03g0130750","None",-0.99089,-0.932858,-1.0731888,-0.9989789,6.4292867E-3,837,0.006429287,0.0104338070306656,0.0308098807132616,"Yes"]
["Os02g0639700","Os02g0639700","LOC_Os02g42670.1",-0.80585146,-0.7573385,-1.4307709,-0.997987,0.013029189,1492,0.013029189,0.0185988531538269,0.0350268613130026,"Yes"]
["GT_Os_A_Specific_0098697","Os03g0114950","None",-1.0144587,-1.1453023,-0.83367825,-0.99781305,0.003465301,480,0.003465301,0.00598354525056095,0.0289569214812499,"Yes"]
["Os01g0904500","Os01g0904500","LOC_Os01g67750.1",-0.9421382,-0.8192682,-1.2287121,-0.9967062,0.030477285,2741,0.030477285,0.0341685365245574,0.0445984641134622,"Yes"]
["Os02g0519900","Os02g0519900","LOC_Os02g32030.1",-0.96524334,-0.8630247,-1.1611719,-0.99648,0.012918693,1483,0.012918693,0.0184866616803789,0.0349405783027646,"Yes"]
["Os_A_Specific_0206654","Os02g0504500","LOC_Os02g30180.1",-0.70403385,-1.0093384,-1.2739391,-0.99577045,0.007596588,974,0.007596588,0.0121416105709299,0.031283279741273,"Yes"]
["Os06g0147200","Os06g0147200","LOC_Os06g05450.1",-1.1645823,-0.7548356,-1.0647116,-0.9947098,2.567433E-3,359,2.567433E-3,4.47519321864871E-3,0.0286851636852367,"Yes"]
["Os12g0579000","Os12g0579000","LOC_Os12g38970.1",-1.2918339,-0.75474405,-0.9372463,-0.9946081,0.013270759,1517,0.013270759,0.018910496135627,0.0350883416934739,"Yes"]
["Os03g0808600","Os03g0808600","LOC_Os03g59390.1",-0.8818569,-0.7628355,-1.3388691,-0.9945205,0.010058418,1236,0.010058418,0.0154076290201944,0.0326410312281553,"Yes"]
["Os01g0833800","Os01g0833800","LOC_Os01g61720.1",-0.86647606,-0.69427395,-1.422576,-0.994442,0.014325407,1608,0.014325407,0.0200448765893792,0.0357333379832089,"Yes"]
["Os01g0908700","Os01g0908700","LOC_Os01g68060.1",-0.39426422,-1.22087,-1.3677464,-0.9942935,0.034344602,2982,0.034344602,0.0371727748691099,0.0461959083239436,"Yes"]
["Os06g0650100","Os06g0650100","LOC_Os06g44080.1",-1.2143335,-0.65576077,-1.1116076,-0.9939006,0.01750763,1863,0.01750763,0.0232236350037397,0.0376935608856682,"Yes"]
["Os03g0125900","Os03g0125900","LOC_Os03g03440.1",-1.0632095,-0.96636486,-0.9510822,-0.9935522,1.2943598E-3,195,1.29436E-3,0.00243081525804038,0.0266239895384615,"Yes"]
["Os03g0628900","Os03g0628900","LOC_Os03g43020.1",-1.057723,-0.69423485,-1.2275143,-0.9931574,0.012674263,1462,0.012674263,0.0182248815756669,0.0347718665478796,"Yes"]
["Os01g0274800","Os01g0274800","LOC_Os01g16810.1",-1.4066892,-0.45162535,-1.1207395,-0.993018,0.022592964,2247,0.022592964,0.0280104712041884,0.0403294964859813,"Yes"]
["Os12g0123200","Os12g0123200","LOC_Os12g02960.1",-0.8994584,-0.5690141,-1.5092463,-0.99257296,0.02455225,2379,0.02455225,0.0296559461480927,0.0413951554224464,"Yes"]
["Os02g0601300","Os02g0601300","LOC_Os02g38920.1",-0.69573784,-0.6934557,-1.5866451,-0.9919462,0.033439267,2934,0.033439267,0.0365744203440538,0.0457140081584867,"Yes"]
["Os09g0483600","Os09g0483600","LOC_Os09g31050.1",-1.1561708,-0.88739157,-0.93204594,-0.99186945,0.007365999,953,0.007365999,0.0118798304662179,0.0310021217093389,"Yes"]
["Os02g0324700","Os02g0324700","LOC_Os02g21920.1",-0.5990038,-0.8623829,-1.5129337,-0.9914401,0.025225118,2364,0.024313357,0.0294689603590127,0.0412524851637055,"Yes"]
["Os02g0126800","Os02g0126800","LOC_Os02g03450.1",-0.955328,-0.6834631,-1.3334794,-0.9907568,0.015100691,1664,0.015100691,0.0207429568686113,0.0363995622602163,"Yes"]
["Os03g0755000","Os03g0755000","LOC_Os03g54780.1",-0.71167994,-0.9934435,-1.2663331,-0.9904855,0.009291142,1163,0.009291142,0.0144976315133383,0.0320436548254514,"Yes"]
["Os03g0843300","Os03g0843300","LOC_Os03g62620.2",-1.0417552,-0.74590874,-1.182291,-0.989985,0.0026495606,375,0.002649561,0.00467464472700074,0.028339704456,"Yes"]
["Os04g0467800","Os04g0467800","LOC_Os04g39280.1",-0.8841214,-0.9031744,-1.181407,-0.9895676,0.021884572,2197,0.021884572,0.0273871852405883,0.0399540365461993,"Yes"]
["Os05g0539700","Os05g0539700","LOC_Os05g46230.1",-0.90337753,-0.54949856,-1.5154638,-0.98944664,0.03154608,2819,0.03154608,0.0351408626277736,0.0448851815821213,"Yes"]
["Os05g0579800","Os05g0579800","LOC_Os05g50360.1",-1.2011538,-0.6033478,-1.1636715,-0.989391,0.012658707,1456,0.012658707,0.0181500872600349,0.0348723034182692,"Yes"]
["Os02g0806300","Os02g0806300","LOC_Os02g56250.1",-0.59504795,-1.0610704,-1.310812,-0.9889768,0.009132865,1141,0.009132865,0.0142233856893542,0.0321051021165644,"Yes"]
["Os01g0150200","Os01g0150200","LOC_Os01g05694.1",-0.811574,-0.859498,-1.2945805,-0.98855084,0.0076666162,985,0.007666616,0.0122787334829219,0.0312190830213197,"Yes"]
["Os08g0104100","Os08g0104100","LOC_Os08g01350.1",-0.6623974,-0.75452805,-1.5479088,-0.9882781,0.02367607,2318,0.02367607,0.0288955372725006,0.0409683851466781,"Yes"]
["Os02g0169300","Os02g0169300","LOC_Os02g07260.1",-0.68586063,-0.98390865,-1.2939968,-0.987922,0.007958609,1015,0.007958609,0.012652705061082,0.0314502272896551,"Yes"]
["Os02g0604300","Os02g0604300","LOC_Os02g39200.1",-0.65750504,-1.1170559,-1.1888456,-0.9878022,0.017621143,1871,0.017621143,0.0233233607579157,0.0377757373452699,"Yes"]
["Os01g0184000","Os01g0184000","LOC_Os01g08850.1",-1.3014913,-0.44076967,-1.2206736,-0.98764485,0.04067258,3326,0.04067258,0.0414609822986786,0.049049223806374,"Yes"]
["Os06g0474200","Os06g0474200","LOC_Os06g27970.1",-1.4265428,-0.49185276,-1.0423002,-0.9868986,0.04003171,3292,0.04003171,0.0410371478434305,0.0487749662241798,"Yes"]
["Os10g0520700","Os10g0520700","LOC_Os10g37640.1",-1.1371822,-0.6871071,-1.1356316,-0.9866403,8.402952E-3,1061,8.402952E-3,0.0132261281475941,0.0317664848934967,"Yes"]
["Os03g0261900","Os03g0261900","LOC_Os03g15540.1",-0.8986101,-0.61528397,-1.445612,-0.986502,0.04210852,3389,0.04210852,0.0422463226128147,0.0498369057893183,"Yes"]
["Os10g0124500","Os10g0124500","LOC_Os10g03600.1",-0.6926403,-1.1449494,-1.1213136,-0.9863011,0.009203564,1152,0.009203564,0.0143605086013462,0.0320447006979166,"Yes"]
["Os03g0606200","Os03g0606200","LOC_Os03g40920.1",-0.8836317,-0.63264227,-1.4421148,-0.9861296,0.02195769,2202,0.02195769,0.0274495138369483,0.0399965007220708,"Yes"]
["Os04g0630000","Os04g0630000","LOC_Os04g53770.1",-1.3129687,-0.36298275,-1.2810302,-0.98566055,0.036537062,3094,0.036537062,0.0385689354275741,0.0473659197420814,"Yes"]
["Os02g0245100","Os02g0245100","LOC_Os02g14790.1",-1.3214879,-0.4999323,-1.1346097,-0.9853433,0.022962853,2271,0.022962853,0.0283096484667165,0.0405565844927344,"Yes"]
["Os_A_Specific_0385368","Os07g0112300","None",-0.7025981,-1.1004834,-1.152175,-0.9850855,0.009047017,1134,0.009047017,0.0141361256544502,0.0319996342037037,"Yes"]
["Os08g0519800","Os08g0519800","LOC_Os08g40830.1",-1.2187834,-0.3416319,-1.3935761,-0.9846638,0.038057487,3173,0.038057487,0.0395537272500623,0.0481085976542704,"Yes"]
["Os01g0101300","Os01g0101300","LOC_Os01g01130.1",-0.59006596,-0.94580126,-1.4175682,-0.9844785,0.014076066,1589,0.014076066,0.0198080279232111,0.0355312150572687,"Yes"]
["Os04g0584800","Os04g0584800","LOC_Os04g49530.1",-1.0351877,-0.88624763,-1.0316005,-0.98434526,0.012560867,1445,0.012560867,0.0180129643480428,0.0348661851467128,"Yes"]
["Os11g0220800","Os11g0220800","LOC_Os11g11390.1",-1.0223379,-0.68468,-1.2423344,-0.9831174,0.015938593,1734,0.015938593,0.0216155572176514,0.0368683370951557,"Yes"]
["Os08g0258200","Os08g0258200","LOC_Os08g15840.1",-0.925251,-0.69476795,-1.3287926,-0.98293716,0.005783044,779,0.005783044,0.00971079531288955,0.0297763664749679,"Yes"]
["GT_Os_A_Specific_0357656","Os03g0103600","None",-0.9077482,-0.91396713,-1.1265306,-0.9827487,0.018320203,1925,0.018320203,0.0239965095986038,0.03817264116,"Yes"]
["Os04g0498200","Os04g0498200","None",-1.0299997,-0.68716717,-1.231019,-0.98272866,0.00835282,1055,0.00835282,0.0131513338319621,0.0317565507298578,"Yes"]
["Os01g0886300","Os01g0886300","LOC_Os01g66300.1",-0.8446541,-0.84952164,-1.2522087,-0.98212814,0.012944333,1486,0.012944333,0.0185240588381949,0.0349392460720053,"Yes"]
["Os02g0819200","Os02g0819200","LOC_Os02g57380.1",-0.9461665,-0.6599674,-1.3360248,-0.98071957,0.009459094,1180,0.009459094,0.0147095487409623,0.032152903418644,"Yes"]
["Os06g0498500","Os06g0498500","LOC_Os06g30320.1",-1.0051217,-0.58790207,-1.3471541,-0.9800593,0.015136162,1666,0.015136162,0.0207678883071553,0.0364412639747899,"Yes"]
["Os03g0796800","Os03g0796800","LOC_Os03g58240.1",-0.6389551,-1.0809178,-1.2189012,-0.97959137,0.0053806407,727,0.005380641,9.06257791074545E-3,0.02968603996011,"Yes"]
["Os05g0120100","Os05g0120100","LOC_Os05g02880.1",-1.5235586,-0.45772648,-0.9550648,-0.9787833,0.039557714,3267,0.039557714,0.0407255048616305,0.0485662659485766,"Yes"]
["Os02g0654400","Os02g0654400","LOC_Os02g43750.1",-0.4150486,-1.0135069,-1.5072489,-0.97860146,0.040045884,3293,0.040045884,0.0410496135627025,0.0487774189869419,"Yes"]
["Os01g0267900","Os01g0267900","LOC_Os01g16240.1",-0.868927,-0.787343,-1.2781839,-0.9781513,0.017720377,1879,0.017720377,0.0234230865120917,0.0378267334470463,"Yes"]
["Os01g0127700","Os01g0127700","LOC_Os01g03690.1",-0.83190155,-1.0883818,-1.0136538,-0.977979,0.00030605283,47,0.000306053,5.85888805784093E-4,0.0261186932553191,"Yes"]
["Os02g0498100","Os02g0498100","LOC_Os02g29500.1",-1.2909279,-0.904356,-0.7386303,-0.9779714,0.029647749,2685,0.029647749,0.0334704562453253,0.0442894306290502,"Yes"]
["Os01g0276100","Os01g0276100","LOC_Os01g16900.1",-1.3462715,-0.598814,-0.9880581,-0.97771454,0.01075799,1298,0.01075799,0.0161805036150585,0.03324368096302,"Yes"]
["Os08g0503800","Os08g0503800","LOC_Os08g39380.1",-0.9786625,-0.49178028,-1.4623594,-0.97760075,0.02434091,2367,0.02434091,0.0295063575168287,0.0412468905830164,"Yes"]
["Os07g0588200","Os07g0588200","LOC_Os07g39920.1",-0.6842141,-1.3891234,-0.85907507,-0.9774709,0.04020129,3301,0.04020129,0.0411493393168785,0.0488480382278097,"Yes"]
["Os02g0189100","Os02g0189100","LOC_Os02g09600.1",-1.491293,-0.43092537,-1.0100412,-0.97741985,0.034514207,2993,0.034514207,0.0373098977811019,0.0462534194042766,"Yes"]
["Os01g0264500","Os01g0264500","LOC_Os01g15979.1",-0.7935505,-0.6757879,-1.4610176,-0.97678536,0.03408209,2970,0.03408209,0.0370231862378459,0.0460280346767676,"Yes"]
["Os01g0905800","Os01g0905800","LOC_Os01g67860.1",-0.45378876,-1.0748482,-1.4006462,-0.97642773,0.037839793,3162,0.037839793,0.0394166043380703,0.0479998133216318,"Yes"]
["Os02g0182500","Os02g0182500","LOC_Os02g08520.1",-0.73024654,-0.7481823,-1.4508104,-0.9764131,0.019771468,2033,0.019771468,0.02534280727998,0.0390080463098868,"Yes"]
["Os01g0329800","Os01g0329800","LOC_Os01g22630.1",-0.76275635,-0.92630005,-1.2396784,-0.9762449,0.03225667,2874,0.03225667,0.0358264771877337,0.0450179204488517,"Yes"]
["Os02g0209400","Os02g0209400","LOC_Os02g11870.1",-1.0379386,-0.57752514,-1.3127685,-0.9760774,0.018041465,1895,0.018041465,0.0236225380204437,0.0381869742031662,"Yes"]
["Os02g0539500","Os02g0539500","LOC_Os02g33600.1",-1.2747016,-0.89315605,-0.7603159,-0.9760578,0.005450284,742,0.005450284,0.00924956369982548,0.0294623842641509,"Yes"]
["Os05g0268500","Os05g0268500","LOC_Os05g18604.1",-0.7877703,-0.6054926,-1.5344417,-0.97590154,0.025957473,2465,0.025957473,0.0307279980054849,0.0422374946056795,"Yes"]
["Os03g0718100","Os03g0718100","LOC_Os03g50885.1",-1.3197293,-0.7003155,-0.9064503,-0.9754984,0.025631081,2442,0.025631081,0.0304412864622288,0.0420992079815724,"Yes"]
["Os05g0461000","Os05g0461000","LOC_Os05g38610.1",-1.4659166,-0.26749134,-1.1920543,-0.9751541,0.053009164,2658,0.029236173,0.0331338818249813,0.044118243003386,"Yes"]
["Os05g0437500","Os05g0437500","LOC_Os05g36150.1",-0.8540344,-0.76190186,-1.3078704,-0.9746022,0.004379838,601,0.004379838,0.00749189728247319,0.029230499530782,"Yes"]
["Os05g0593800","Os05g0593800","LOC_Os05g51560.1",-0.92560625,-1.151577,-0.8462362,-0.9744732,0.0035523232,496,3.552323E-3,0.00618299675891298,0.028726547485887,"Yes"]
["Os03g0214600","Os03g0214600","LOC_Os03g11570.1",-1.2168045,-0.51091576,-1.1941586,-0.9739596,0.01371613,1553,0.01371613,0.019359262029419,0.0354252398132646,"Yes"]
["Os09g0407700","Os09g0407700","LOC_Os09g24230.1",-1.1846771,-0.81140614,-0.92549896,-0.97386074,2.5589045E-3,357,0.002558905,0.00445026178010471,0.0287500502941176,"Yes"]
["Os04g0270100","Os04g0270100","LOC_Os04g20220.1",-0.63881826,-1.1169806,-1.1648526,-0.9735505,0.007346121,949,0.007346121,0.0118299675891298,0.0310487790632244,"Yes"]
["Os10g0422200","Os10g0422200","LOC_Os10g28630.1",-0.93932295,-0.7398665,-1.2389035,-0.9726977,0.02415696,2353,0.02415696,0.0293318374470206,0.041178736319592,"Yes"]
["Os02g0786000","Os02g0786000","LOC_Os02g54500.1",-0.90293694,-0.5476904,-1.4671898,-0.9726057,0.038185798,3183,0.038185798,0.0396783844427823,0.048119144133836,"Yes"]
["Os05g0475300","Os05g0475300","LOC_Os05g39760.1",-1.0699339,-0.5645952,-1.2825184,-0.97234917,0.013724248,1555,0.013724248,0.0193841934679631,0.0354006165453376,"Yes"]
["Os07g0631500","Os07g0631500","None",-0.96334505,-1.0745792,-0.8790617,-0.97232866,0.00097366975,141,0.00097367,0.00175766641735228,0.0276978040425531,"Yes"]
["Os08g0495500","Os08g0495500","LOC_Os08g38700.1",-0.4545393,-1.0105414,-1.4491644,-0.97141504,0.037842657,3163,0.037842657,0.0394290700573423,0.0479882697524502,"Yes"]
["Os07g0208000","Os07g0208000","LOC_Os07g10720.1",-1.0557919,-0.64258194,-1.215066,-0.9711466,0.0153571265,1687,0.015357127,0.0210296684118673,0.0365130031991701,"Yes"]
["Os04g0436100","Os04g0436100","LOC_Os04g35590.1",-0.5580063,-0.9201145,-1.4333191,-0.97047997,0.025844887,2458,0.025844887,0.0306407379705809,0.0421740609263628,"Yes"]
["GT_Os_A_Specific_0227880","Os06g0121400","LOC_Os06g03070.1",-0.75404835,-1.0628986,-1.093915,-0.9702873,0.0010526223,157,1.052622E-3,0.00195711792570431,0.0268921454904458,"Yes"]
["Os11g0660500","Os11g0660500","LOC_Os11g43900.1",-0.81877136,-0.7785187,-1.3130846,-0.9701249,0.004706171,644,0.004706171,0.00802792321116928,0.0293112606847826,"Yes"]
["Os04g0399000","Os04g0399000","LOC_Os04g32710.1",-0.7491827,-0.789114,-1.3719234,-0.9700734,0.036743816,3114,0.036743816,0.0388182498130142,0.0473280173333333,"Yes"]
["Os02g0105100","Os02g0105100","LOC_Os02g01490.1",-1.409843,-0.60851,-0.88924074,-0.9691979,0.01626354,1762,0.01626354,0.0219645973572675,0.0370221673893303,"Yes"]
["Os01g0528000","Os01g0528000","LOC_Os01g34420.1",-0.87393427,-0.80206966,-1.2274132,-0.9678057,0.02245081,2238,0.02245081,0.0278982797307404,0.0402369074664879,"Yes"]
["Os03g0783000","Os03g0783000","LOC_Os03g56970.1",-0.8027773,-0.8945341,-1.1996965,-0.96566933,0.005017654,687,0.005017654,0.00856394913986537,0.0292952113449781,"Yes"]
["Os02g0604100","Os02g0604100","LOC_Os02g39180.1",-1.406055,-0.38832378,-1.1014667,-0.9652818,0.03643871,3089,0.03643871,0.0385066068312141,0.0473148804823567,"Yes"]
["Os04g0405800","Os04g0405800","LOC_Os04g33300.1",-1.0158367,-0.7819691,-1.0939779,-0.9639279,0.02663008,2499,0.02663008,0.0311518324607329,0.0427423973109243,"Yes"]
["Os01g0300600","Os01g0300600","LOC_Os01g19470.1",-0.48705482,-0.8492451,-1.5539408,-0.96341354,0.036537375,3095,0.036537375,0.0385814011468461,0.047351021365105,"Yes"]
["Os05g0490100","Os05g0490100","LOC_Os05g41110.1",-0.87078667,-0.7445078,-1.2743721,-0.9632222,0.017549653,1865,0.017549653,0.0232485664422837,0.0377435164520107,"Yes"]
["Os03g0421700","Os03g0421700","LOC_Os03g30800.1",-1.3607588,-0.41208363,-1.1151443,-0.9626622,0.029725226,2689,0.029725226,0.0335203191224133,0.0443391154652287,"Yes"]
["Os03g0421700","Os03g0829000","LOC_Os03g61330.1",-1.3607588,-0.41208363,-1.1151443,-0.9626622,0.029725226,2690,0.029725226,0.0335327848416853,0.0443226325226765,"Yes"]
["Os02g0643800","Os02g0643800","LOC_Os02g42990.1",-1.0090799,-0.8411188,-1.037436,-0.9625449,0.024968589,2402,0.024968589,0.0299426576913487,0.0416940093584512,"Yes"]
["Os02g0321900","Os02g0321900","LOC_Os02g21660.1",-1.0853634,-0.5579729,-1.2429314,-0.96208924,0.040470496,3316,0.040470496,0.0413363251059586,0.0489527018866103,"Yes"]
["Os03g0826600","Os03g0826600","LOC_Os03g61130.1",-0.93338776,-0.7209692,-1.2281742,-0.96084374,0.0077151344,994,0.007715134,0.0123909249563699,0.0311321956478873,"Yes"]
["Os08g0562200","Os08g0562200","LOC_Os08g44820.1",-0.7745776,-0.86420107,-1.2432046,-0.9606611,0.009148377,1144,0.009148377,0.0142607828471702,0.0320752973312937,"Yes"]
["Os05g0460200","Os05g0460200","LOC_Os05g38550.1",-0.9657135,-0.739563,-1.1763325,-0.9605363,0.0029044088,406,0.002904409,0.00506108202443281,0.0286935578793103,"Yes"]
["Os05g0494500","Os05g0494500","LOC_Os05g41480.1",-0.7128954,-0.8302698,-1.33844,-0.96053505,0.008129456,1038,0.008129456,0.012939416604338,0.031413533734104,"Yes"]
["Os01g0267200","Os01g0267200","LOC_Os01g16190.1",-0.9417114,-0.5565758,-1.3830872,-0.9604581,0.017079253,1833,0.017079253,0.0228496634255796,0.0373730953535188,"Yes"]
["Os03g0268100","Os03g0268100","LOC_Os03g16120.1",-0.88912106,-0.6854744,-1.3063226,-0.960306,0.03105935,2787,0.03105935,0.0347419596110695,0.0447000548439181,"Yes"]
["Os09g0347700","Os09g0347700","LOC_Os09g17840.1",-0.8589859,-0.73109055,-1.2900357,-0.9600374,0.007997689,1022,0.007997689,0.012739965095986,0.0313881903904109,"Yes"]
["Os05g0383100","Os05g0383100","LOC_Os05g31780.1",-1.319581,-0.47014427,-1.0886006,-0.95944196,0.025344843,2421,0.025344843,0.0301795063575168,0.0419901550074349,"Yes"]
["GT_Os_A_Specific_0005552","Os09g0501850","LOC_Os09g32526.1",-0.6764307,-0.6527066,-1.5486541,-0.9592638,0.036582973,3104,0.036582973,0.0386935926202942,0.047272649711018,"Yes"]
["Os03g0201600","Os03g0201600","LOC_Os03g10450.1",-1.0248137,-0.35883617,-1.4924369,-0.9586956,0.042377587,3402,0.042377587,0.0424083769633507,0.0499636982530864,"Yes"]
["GT_Os_A_Specific_0085491","Os01g0721900","LOC_Os01g52390.1",-0.6291523,-0.67209625,-1.5745783,-0.9586089,0.031768948,2837,0.031768948,0.0353652455746696,0.0449154918674656,"Yes"]
["Os06g0125200","Os06g0125200","LOC_Os06g03520.1",-0.5546913,-0.96651363,-1.3541365,-0.95844716,0.026799282,2510,0.026799282,0.031288955372725,0.0428254661760956,"Yes"]
["Os05g0208000","Os05g0208000","LOC_Os05g11780.1",-0.5928478,-0.7884245,-1.4908028,-0.95735836,0.029185036,2655,0.029185036,0.0330964846671653,0.0440908396971751,"Yes"]
["Os03g0182700","Os03g0182700","LOC_Os03g08450.1",-1.2159748,-0.44327068,-1.2103682,-0.9565379,0.03899044,3228,0.03899044,0.0402393418100224,0.0484481582527881,"Yes"]
["Os07g0568300","Os07g0568300","LOC_Os07g38090.1",-0.54822063,-0.785038,-1.5357113,-0.9563233,0.034618165,3000,0.034618165,0.0373971578160059,0.046284486605,"Yes"]
["Os02g0114700","Os02g0114700","LOC_Os02g02360.1",-1.133461,-0.3917055,-1.3405414,-0.95523596,0.039062083,3230,0.039062083,0.0402642732485664,0.0485071253600619,"Yes"]
["Os07g0687300","Os07g0687300","LOC_Os07g48790.1",-0.80066967,-0.9556804,-1.1090908,-0.95514697,0.041573875,3366,0.041573875,0.0419596110695587,0.0495403483734402,"Yes"]
["Os05g0215700","Os05g0215700","LOC_Os05g12481.1",-0.89741325,-0.90947914,-1.0577841,-0.95489216,0.0057077175,768,0.005707718,0.00957367240089753,0.0298094490859375,"Yes"]
["Os02g0714000","Os02g0714000","LOC_Os02g48340.1",-0.87055874,-0.49202347,-1.5020761,-0.95488614,0.038817637,3218,0.038817637,0.0401146846173024,0.0483833256702921,"Yes"]
["Os08g0482700","Os08g0482700","LOC_Os08g37670.1",-0.67841625,-0.8090067,-1.3769283,-0.95478374,0.016339237,1770,0.016339237,0.0220643231114435,0.037026372659322,"Yes"]
["Os06g0168600","Os06g0168600","LOC_Os06g07210.1",-1.2446289,-0.66410637,-0.9545393,-0.95442486,0.007183037,932,0.007183037,0.0116180503615058,0.0309132633122317,"Yes"]
["Os04g0484900","Os04g0484900","LOC_Os04g40840.1",-0.7345686,-0.77733517,-1.3500042,-0.9539693,0.011217802,1341,0.011217802,0.0167165295437546,0.03355302298434,"Yes"]
["Os01g0679700","Os01g0679700","LOC_Os01g48770.2",-1.0537348,-0.7291765,-1.0773993,-0.95343685,0.0032034481,447,0.003203448,0.00557217651458489,0.0287450333959731,"Yes"]
["Os07g0230400","Os07g0230400","LOC_Os07g12700.1",-0.8422303,-1.3689413,-0.6482234,-0.9531317,0.021160308,2137,0.021160308,0.0266392420842682,0.0397164227365465,"Yes"]
["Os06g0143900","Os06g0143900","LOC_Os06g05180.3",-1.2162571,-0.47237587,-1.1698723,-0.9528351,0.015347692,1684,0.015347692,0.0209922712540513,0.03655557756057,"Yes"]
["Os08g0416100","Os08g0416100","LOC_Os08g32090.1",-1.2084899,-0.578701,-1.0683231,-0.951838,0.008857043,1118,0.008857043,0.0139366741460982,0.0317760281511627,"Yes"]
["Os03g0766000","Os03g0766000","LOC_Os03g55730.1",-0.75901604,-0.7699928,-1.3259377,-0.9516489,0.00812525,1036,0.00812525,0.012914485165794,0.031457893581081,"Yes"]
["Os07g0674700","Os07g0674700","LOC_Os07g47780.1",-1.3497953,-0.43972683,-1.0653439,-0.951622,0.03595155,3064,0.03595155,0.0381949638494141,0.0470632072617493,"Yes"]
["Os02g0523500","Os02g0523500","LOC_Os02g32350.1",-1.0430422,-0.6684408,-1.1430359,-0.9515063,0.0027011451,383,0.002701145,0.00477437048117676,0.0282879702219321,"Yes"]
["Os08g0182400","Os08g0182400","LOC_Os08g08360.1",-0.9939518,-0.630703,-1.2252264,-0.9499604,0.010536989,1283,0.010536989,0.0159935178259785,0.0329414363826968,"Yes"]
["Os01g0195000","Os01g0195000","LOC_Os01g09850.1",-1.0602031,-0.6028342,-1.1851912,-0.9494095,0.022646802,2252,0.022646802,0.0280727998005484,0.0403358449476021,"Yes"]
["Os01g0165000","Os01g0165000","LOC_Os01g07120.1",-1.1480541,-0.6260109,-1.0725918,-0.9488856,0.005850306,786,0.005850306,0.00979805534779356,0.0298544241297709,"Yes"]
["Os05g0557000","Os05g0557000","LOC_Os05g48320.1",-1.0441608,-0.647892,-1.153882,-0.94864494,0.031906642,2846,0.031906642,0.0354774370481176,0.0449675126711173,"Yes"]
["Os12g0170600","Os12g0170600","LOC_Os12g07290.1",-0.4852152,-1.0298886,-1.3294806,-0.9481948,0.031525787,2817,0.031525787,0.0351159311892296,0.0448881546528221,"Yes"]
["Os02g0152600","Os02g0152600","LOC_Os02g05870.1",-0.7798953,-0.64058685,-1.4229274,-0.9478032,0.016585749,1794,0.016585749,0.0223635003739715,0.0370821846371237,"Yes"]
["Os01g0776400","Os01g0776400","LOC_Os01g56860.1",-0.501946,-1.0435228,-1.2974167,-0.9476285,0.016210986,1757,0.016210986,0.0219022687609075,0.0370075497131474,"Yes"]
["Os03g0234200","Os03g0234200","LOC_Os03g13170.1",-0.8405905,-0.76922226,-1.2327118,-0.94750816,0.020315051,2086,0.020315051,0.0260034904013961,0.0390621618221476,"Yes"]
["Os02g0137800","Os02g0137800","LOC_Os02g04520.1",-0.5212736,-0.9470167,-1.3723431,-0.9468778,0.033942085,2961,0.033942085,0.0369109947643979,0.0459782853546099,"Yes"]
["Os10g0183900","Os10g0183900","LOC_Os10g10434.1",-1.1670132,-0.5236187,-1.1481218,-0.9462512,0.021880787,2196,0.021880787,0.0273747195213163,0.039965317239071,"Yes"]
["Os01g0752700","Os01g0752700","LOC_Os01g54910.1",-1.0764523,-0.85560226,-0.9036417,-0.9452321,0.004085377,561,0.004085377,0.00699326851159311,0.0292093532032085,"Yes"]
["Os04g0601500","Os04g0601500","LOC_Os04g51250.1",0.96409225,0.43975067,1.4371347,0.9469926,0.03492277,3013,0.03492277,0.037559212166542,0.0464902855857948,"Yes"]
["Os06g0146200","Os06g0146200","LOC_Os06g05368.1",0.7053256,0.76430225,1.3777103,0.9491127,0.025350142,2422,0.025350142,0.0301919720767888,0.0419815935433526,"Yes"]
["GT_Os_A_Specific_0184408","Os08g0165901","LOC_Os08g06885.1",1.3722982,0.5516176,0.93045807,0.951458,0.019219438,1983,0.019219438,0.0247195213163799,0.0388750205839636,"Yes"]
["Os01g0962700","Os01g0962700","LOC_Os01g73170.1",0.9323368,0.87059593,1.0547056,0.9525461,0.014481106,1626,0.014481106,0.0202692595362752,0.0357218426605166,"Yes"]
["GT_Os_A_Specific_0074244","Os03g0749051","None",0.67203474,0.9438858,1.2439971,0.9533059,0.03548582,3042,0.03548582,0.03792071802543,0.0467894885009861,"Yes"]
["Os02g0643500","Os02g0643500","LOC_Os02g42960.1",0.94188213,0.44988155,1.4747181,0.9554939,0.03944483,3255,0.03944483,0.0405759162303664,0.0486062098709677,"Yes"]
["Os11g0148800","Os11g0148800","LOC_Os11g05140.1",0.6713424,0.98601055,1.2098594,0.9557374,0.007670943,986,0.007670943,0.0122911992021939,0.0312050226906693,"Yes"]
["Os12g0450500","Os12g0450500","LOC_Os12g26480.1",1.1686163,0.35416174,1.3462296,0.95633584,0.034137875,2972,0.034137875,0.0370481176763899,0.0460723474512113,"Yes"]
["GT_Os_A_Specific_0002289","Os06g0648200","LOC_Os06g43980.1",1.0293293,0.82595015,1.0140123,0.9564306,3.909689E-3,544,3.909689E-3,0.00678135128396908,0.0288267694466911,"Yes"]
["Os07g0637200","Os07g0637200","LOC_Os07g44320.1",1.0537605,0.99995136,0.8165226,0.95674485,0.0059451363,797,0.005945136,9.93517825978559E-3,0.0299196242107904,"Yes"]
["Os01g0165200","Os01g0165200","LOC_Os01g07140.1",1.569437,0.6026459,0.70630217,0.9594617,0.036987875,3128,0.036987875,0.0389927698828222,0.0474291453404731,"Yes"]
["Os06g0283400","Os06g0283400","LOC_Os06g17290.1",1.129343,0.6663418,1.0867682,0.96081764,0.018259907,1921,0.018259907,0.0239466467215158,0.0381262295559604,"Yes"]
["GT_Os_A_Specific_0183756","Os04g0615550","None",0.6791754,0.9886756,1.2181001,0.9619837,0.01804021,1894,0.01804021,0.0236100723011717,0.0382044785163674,"Yes"]
["Os04g0682500","Os04g0682500","LOC_Os04g58600.2",1.223907,0.54577446,1.1194105,0.96303064,0.010585391,1676,0.015262811,0.0208925454998753,0.0365269301437947,"Yes"]
["GT_Os_A_Specific_0199643","Os03g0170900","LOC_Os03g07480.1",0.80314684,1.4478264,0.63837767,0.96311694,0.020828448,2118,0.020828448,0.0264023934181002,0.0394442421756373,"Yes"]
["Os06g0334600","Os06g0334600","LOC_Os06g22829.1",1.0581546,0.68514824,1.1503358,0.9645462,0.011607137,1379,0.011607137,0.0171902268760907,0.0337608604111675,"Yes"]
["Os09g0380200","Os09g0380200","LOC_Os09g21250.1",1.1315746,0.33709908,1.4272289,0.96530086,0.039463148,3259,0.039463148,0.0406257791074545,0.0485690968481129,"Yes"]
["Os01g0136100","Os01g0136100","LOC_Os01g04370.1",1.0543394,0.70961094,1.1323583,0.9654362,0.020621685,2106,0.020621685,0.0262528047868361,0.0392752034829059,"Yes"]
["Os10g0480200","Os10g0480200","LOC_Os10g33960.1",1.015243,1.0643063,0.82031965,0.966623,0.03349142,2937,0.03349142,0.0366118175018698,0.045738537834525,"Yes"]
["Os02g0190600","Os02g0190600","LOC_Os02g09750.1",0.6005297,0.83098316,1.471303,0.9676053,0.023597008,2312,0.023597008,0.0288207429568686,0.0409375428581314,"Yes"]
["Os12g0530000","Os12g0530000","LOC_Os12g34510.1",1.3916688,0.86985826,0.641932,0.9678197,0.02070548,2109,0.02070548,0.0262902019446522,0.0393787009388335,"Yes"]
["GT_Os_A_Specific_0037952","Os06g0608600","LOC_Os06g40630.1",1.2003083,0.8359442,0.8672695,0.9678407,0.004401163,606,0.004401163,0.0075542258788332,0.0291304699554455,"Yes"]
["Os04g0464300","Os04g0464300","None",1.3675561,0.35749435,1.1801405,0.96839696,0.040089246,3295,0.040089246,0.0410745450012465,0.0488005965723824,"Yes"]
["GT_Os_A_Specific_0016997","Os12g0639600","LOC_Os12g44230.1",0.74274397,1.3100386,0.85787153,0.970218,0.01265907,1458,0.01265907,0.0181750186985789,0.0348254662345679,"Yes"]
["Os04g0537900","Os04g0537900","LOC_Os04g45470.1",0.9146633,0.8549175,1.1424417,0.9706742,0.0044587986,614,0.004458799,0.00765395163300922,0.029127431252443,"Yes"]
["Os06g0694500","Os06g0694500","LOC_Os06g47940.1",1.2917314,0.5043068,1.1235952,0.9732111,0.028231632,2600,0.028231632,0.0324108701072051,0.04355272152,"Yes"]
["Os10g0396300","Os10g0396300","LOC_Os10g25674.1",0.82649136,1.0865583,1.0074396,0.97349644,0.01657197,1789,0.01657197,0.0223011717776115,0.0371549310620458,"Yes"]
["Os08g0481400","Os08g0481400","LOC_Os08g37580.1",1.0830193,0.7634702,1.0812821,0.97592384,0.04241928,3405,0.04241928,0.0424457741211667,0.0499687906255506,"Yes"]
["GT_Os_A_Specific_0040782","Os09g0545550","None",0.9883981,0.89665174,1.0454936,0.9768478,0.0005543011,92,0.000554301,1.14684617302418E-3,0.024166318597826,"Yes"]
["Os04g0676000","Os04g0676000","LOC_Os04g57920.1",0.66186047,1.0419612,1.229619,0.97781354,0.011982302,1408,0.011982302,0.0175517327349788,0.0341342424161931,"Yes"]
["Os05g0141300","Os05g0141300","LOC_Os05g04930.1",1.0109458,1.1898308,0.7335758,0.97811747,1.9935023E-3,279,0.001993502,0.00347793567688855,0.028659270688172,"Yes"]
["GT_Os_A_Specific_0055970","Os09g0419500","LOC_Os09g25190.1",0.65239954,0.85197735,1.4339657,0.97944754,0.01435402,1612,0.01435402,0.0200947394664672,0.0357158649007444,"Yes"]
["GT_Os_A_Specific_0186335","Os03g0170400","LOC_Os03g07430.1",0.96306515,1.1138277,0.8691139,0.98200226,0.0050508417,691,0.005050842,0.00861381201695338,0.0293182738958031,"Yes"]
["GT_Os_A_Specific_0048013","Os02g0580800","LOC_Os02g37030.1",0.94045544,0.95894146,1.0534158,0.9842709,0.008531426,1081,0.008531426,0.0134754425330341,0.031655457618871397,"Yes"]
["Os11g0526200","Os11g0526200","LOC_Os11g32320.1",0.9740362,0.58357334,1.3955564,0.98438865,0.026381388,2484,0.026381388,0.0309648466716529,0.0425989320724637,"Yes"]
["Os01g0621300","Os01g0621300","LOC_Os01g43330.1",1.2896862,1.0404205,0.62627697,0.98546124,0.031159561,2793,0.031159561,0.0348167539267015,0.0447479409849624,"Yes"]
["GT_Os_A_Specific_0018403","Os03g0213900","LOC_Os03g11520.1",1.0340514,0.6969018,1.2283182,0.9864238,0.0074481834,962,0.007448183,0.0119920219396659,0.0310547422172557,"Yes"]
["Os06g0118800","Os06g0118800","LOC_Os06g02800.1",0.5450921,1.3415756,1.0728273,0.98649836,0.030175896,2727,0.030175896,0.0339940164547494,0.044384128660066,"Yes"]
["GT_Os_A_Specific_0023862","Os01g0226500","LOC_Os01g12670.1",1.151871,1.0660834,0.74326086,0.98707175,0.0032416356,451,3.241636E-3,0.0056220393916729,0.0288297161773835,"Yes"]
["Os11g0170400","Os11g0170400","LOC_Os11g06934.1",0.8794241,0.63734007,1.4466901,0.98781806,0.019495018,2009,0.019495018,0.025043630017452,0.0389221091080139,"Yes"]
["Os06g0352900","Os06g0352900","LOC_Os06g24540.1",1.0917101,0.65485954,1.2181606,0.9882434,0.010405613,1267,0.010405613,0.0157940663176265,0.032941526237569,"Yes"]
["Os01g0165100","Os01g0165100","LOC_Os01g07130.1",1.451004,0.5925598,0.92354584,0.98903656,0.030897748,2771,0.030897748,0.0345425081027175,0.0447242393460844,"Yes"]
["Os03g0857100","Os03g0857100","LOC_Os03g64010.1",1.0330877,0.63745975,1.2975283,0.9893586,0.03167235,2829,0.03167235,0.0352655198204936,0.0449055481972428,"Yes"]
["Os05g0102800","Os05g0102800","LOC_Os05g01240.1",0.5472584,1.1658897,1.2578473,0.9903318,0.03707117,3137,0.03707117,0.0391049613562702,0.0473995737551801,"Yes"]
["Os10g0457500","Os10g0457500","LOC_Os10g31940.1",0.6434603,0.8893509,1.4402962,0.99103576,0.03127093,2802,0.03127093,0.0349289454001495,0.0447636332012848,"Yes"]
["Os02g0708400","Os02g0708400","LOC_Os02g47880.1",1.0023727,0.43012047,1.5476265,0.9933732,0.037828457,3159,0.037828457,0.0393792071802543,0.0480310038072174,"Yes"]
["GT_Os_A_Specific_0010184","Os02g0770600","LOC_Os02g53110.1",1.3181415,0.7120209,0.9537029,0.99462175,0.03569555,3054,0.03569555,0.038070306656694,0.0468810907170923,"Yes"]
["Os04g0413000","Os04g0413000","LOC_Os04g33700.1",0.9248519,0.8820071,1.1818662,0.99624175,0.030673236,2753,0.030673236,0.0343181251558214,0.0446895567003269,"Yes"]
["Os04g0408700","Os04g0408700","LOC_Os04g33440.2",1.0226107,0.9254427,1.0448675,0.9976403,0.00018280819,30,0.000182808,0.000373971578160059,0.0244414295999999,"Yes"]
["Os01g0857200","Os01g0857200","LOC_Os01g63830.1",1.1466026,0.91479635,0.93244123,0.99794674,0.0009965905,142,0.000996591,1.77013213662428E-3,0.0281501866267605,"Yes"]
["GT_Os_A_Specific_0184881","Os02g0480200","LOC_Os02g27870.1",0.8248186,1.0415826,1.1288009,0.9984007,0.007688224,991,0.007688224,0.0123535277985539,0.0311175241816347,"Yes"]
["Os06g0137600","Os06g0137600","LOC_Os06g04610.1",0.97848797,0.54919624,1.4763689,1.001351,0.04046201,3315,0.04046201,0.0413238593866866,0.048957201239819,"Yes"]
["GT_Os_A_Specific_0009410","Os06g0499500","LOC_Os06g30440.1",1.2513618,1.0086522,0.7496247,1.0032129,0.014530466,1629,0.014530466,0.0203066566940912,0.0357775930791896,"Yes"]
["Os04g0604900","Os04g0604900","LOC_Os04g51520.1",1.0484338,0.8243232,1.1372495,1.0033355,0.019825779,2045,0.019825779,0.025492395911244,0.0388856721608802,"Yes"]
["GT_Os_A_Specific_0078010","Os01g0919600","LOC_Os01g69050.1",0.89657164,1.0745745,1.0413175,1.0041546,0.0011757556,178,1.175756E-3,2.21889803041635E-3,0.0264941422247191,"Yes"]
["Os01g0883800","Os01g0883800","LOC_Os01g66100.1",0.8382292,1.093576,1.0813951,1.0044001,0.01728029,1848,0.01728029,0.0230366492146596,0.0375060839772727,"Yes"]
["Os01g0664000","Os01g0664000","LOC_Os01g47450.1",1.1476545,0.75904846,1.1098557,1.0055195,0.0039587673,551,0.003958767,6.8686113188731E-3,0.028817812045372,"Yes"]
["GT_Os_A_Specific_0246657","Os06g0237502","LOC_Os06g13050.1",1.1369276,0.75054646,1.1295013,1.0056585,0.013693254,1551,0.013693254,0.019334330590875,0.0354117613114119,"Yes"]
["Os03g0123300","Os03g0123300","LOC_Os03g03150.1",1.1851478,0.57551765,1.2609701,1.0072118,0.010336739,1257,0.010336739,0.0156694091249065,0.032983818718377,"Yes"]
["Os09g0573000","Os09g0573000","LOC_Os09g39970.1",0.70688343,0.7981067,1.5192151,1.0080684,0.038775135,3215,0.038775135,0.0400772874594864,0.0483754483623639,"Yes"]
["Os12g0479900","Os12g0479900","LOC_Os12g29550.1",0.86602306,0.84878826,1.3111801,1.0086638,3.083354E-3,427,3.083354E-3,0.00532286212914485,0.0289633088852459,"Yes"]
["Os12g0584200","Os12g0584200","LOC_Os12g39440.1",0.3604617,1.139183,1.5299053,1.00985,0.039935388,3289,0.039935388,0.0409997506856145,0.0487019888318637,"Yes"]
["Os02g0829600","Os02g0829600","LOC_Os02g58270.1",1.3524938,0.71119165,0.9684453,1.0107102,0.0064139254,834,6.413925E-3,0.0103964098728496,0.0308468263489208,"Yes"]
["Os05g0376300","Os05g0376300","LOC_Os05g31230.1",0.97543716,0.9540243,1.1048002,1.0114206,0.007686463,990,0.007686463,0.0123410620792819,0.0311418213060606,"Yes"]
["Os03g0638200","Os03g0638200","LOC_Os03g43720.1",1.3365116,1.3094997,0.38986015,1.0119572,0.031465534,2813,0.031465534,0.0350660683121416,0.0448660706981869,"Yes"]
["Os04g0617200","Os04g0617200","None",0.9754467,0.6033664,1.4596496,1.0128208,0.018247299,1919,0.018247299,0.0239217152829718,0.0381396124486711,"Yes"]
["Os08g0520400","Os08g0520400","LOC_Os08g40890.1",0.62652874,1.3680291,1.044138,1.0128986,0.042473324,3410,0.042473324,0.0425081027175268,0.049959091660997,"Yes"]
["Os01g0500600","Os01g0500600","None",0.7883382,0.70385504,1.5484447,1.013546,0.02755242,2564,0.02755242,0.0319621042134131,0.0431016991497659,"Yes"]
["Os09g0381100","Os09g0381100","LOC_Os09g21340.1",1.212018,0.97131634,0.85768604,1.0136734,0.00079901237,114,0.000799012,0.00142109199700822,0.0281126064210526,"Yes"]
["Os12g0414900","Os12g0414900","LOC_Os12g22620.1",0.5416603,1.2469721,1.2559314,1.0148546,0.025722064,2450,0.025722064,0.0305410122164048,0.0421106933485714,"Yes"]
["Os05g0104200","Os05g0104200","LOC_Os05g01370.1",0.98168135,0.4932027,1.5719848,1.015623,0.03268063,2888,0.03268063,0.0360009972575417,0.0453885065547091,"Yes"]
["GT_Os_A_Specific_0021221","Os01g0232700","LOC_Os01g13190.1",1.056045,0.72204256,1.2725992,1.0168957,0.006887091,905,0.006887091,0.0112814759411618,0.0305238917138121,"Yes"]
["Os01g0328700","Os01g0328700","LOC_Os01g22520.1",1.4058046,0.41920948,1.2267895,1.0172678,0.032796256,2899,0.032796256,0.0361381201695337,0.0453762617509486,"Yes"]
["GT_Os_A_Specific_0006872","Os04g0340800","LOC_Os04g27250.1",1.3719354,0.33070898,1.356957,1.0198671,0.042347398,3400,0.042347398,0.0423834455248067,0.0499574745229411,"Yes"]
["Os04g0470600","Os04g0470600","LOC_Os04g39470.1",1.6496401,0.6068373,0.80319595,1.0198911,0.030503603,2743,0.030503603,0.0341934679631014,0.0446044300521327,"Yes"]
["Os08g0130000","Os08g0130000","LOC_Os08g03600.1",0.54672146,1.1645417,1.3485708,1.0199447,0.03133517,2805,0.03133517,0.0349663425579655,0.0448076174224598,"Yes"]
["Os03g0214400","Os03g0214400","LOC_Os03g11560.1",0.8192835,1.1123819,1.1310377,1.0209011,0.01032908,1256,0.01032908,0.0156569434056345,0.0329856209235668,"Yes"]
["Os03g0799100","Os03g0799100","LOC_Os03g58480.1",1.1297884,0.73316383,1.2032442,1.0220655,0.0022839687,320,0.002283969,0.00398903016704063,0.028628123934375,"Yes"]
["Os_A_Specific_0001258","Os03g0118400","LOC_Os03g02680.1",1.2722096,0.9390836,0.8553748,1.0222226,0.01083798,1311,0.01083798,0.0163425579655946,0.0331587626086956,"Yes"]
["Os01g0715400","Os01g0715400","LOC_Os01g51754.1",0.4718256,1.5310149,1.0644026,1.0224143,0.027770901,2580,0.027770901,0.0321615557217651,0.0431740635313953,"Yes"]
["Os02g0125000","Os02g0125000","LOC_Os02g03250.1",1.0972157,0.50198555,1.4692016,1.0228009,0.042555284,3414,0.042555284,0.0425579655946148,0.0499968494797891,"Yes"]
["Os06g0267500","Os06g0267500","None",1.6291122,0.6540184,0.7862921,1.0231409,0.030141395,2725,0.030141395,0.0339690850162054,0.0443659212275229,"Yes"]
["GT_Os_A_Specific_0071644","Os01g0754500","LOC_Os01g55050.1",0.6246276,1.0539231,1.3913779,1.0233096,0.028783519,2633,0.028783519,0.0328222388431812,0.0438475862928218,"Yes"]
["Os10g0437900","Os10g0437900","LOC_Os10g30180.1",1.0782051,0.7541032,1.2400208,1.0241097,0.006112726,812,0.006112726,0.0101221640488656,0.0301947586034482,"Yes"]
["Os06g0537700","Os06g0537700","LOC_Os06g34660.1",0.93355775,0.853863,1.2874551,1.0249586,0.01739594,1856,0.01739594,0.0231363749688357,0.0375943509375,"Yes"]
["Os06g0727300","Os06g0727300","LOC_Os06g51160.1",1.260015,0.70084476,1.1147738,1.0252112,0.005235181,712,0.005235181,0.00887559212166542,0.0294920098188202,"Yes"]
["Os08g0558200","Os08g0558200","LOC_Os08g44400.1",1.4325838,0.4925208,1.1565208,1.0272084,0.036339164,3081,0.036339164,0.0384068810770381,0.04730814242259,"Yes"]
["Os05g0533600","Os05g0533600","LOC_Os05g45720.1",1.1650357,1.0582561,0.8600292,1.0277737,0.0018422245,265,0.001842225,0.00330341560708052,0.0278836395283018,"Yes"]
["Os01g0929000","Os01g0929000","LOC_Os01g70390.1",0.9052067,1.009367,1.1692553,1.027943,0.0049906215,684,0.004990622,0.00852655198204936,0.0292651825175438,"Yes"]
["Os01g0715000","Os01g0715000","LOC_Os01g51710.1",1.0469632,0.5496702,1.488925,1.0285195,0.03772432,3155,0.03772432,0.0393293443031662,0.0479595079302694,"Yes"]
["Os03g0178100","Os03g0178100","LOC_Os03g08070.1",1.0576234,0.8574033,1.1716876,1.0289048,0.00081162713,116,0.000811627,1.44602343555223E-3,0.0280641025603448,"Yes"]
["Os12g0219700","Os12g0219700","LOC_Os12g11830.1",1.1904459,0.58513546,1.3111696,1.028917,0.035498075,3043,0.035498075,0.037933183744702,0.046790265798554,"Yes"]
["Os09g0520000","Os09g0520000","LOC_Os09g34847.1",1.2624664,0.9642949,0.8612189,1.0293268,0.01717061,1840,0.01717061,0.0229369234604836,0.0374300634293478,"Yes"]
["GT_Os_A_Specific_0086861","Os06g0498400","LOC_Os06g30310.1",1.3080835,0.63131666,1.1570373,1.0321459,0.016947139,1821,0.016947139,0.0227000747943156,0.0373283770065897,"Yes"]
["Os01g0670800","Os01g0670800","LOC_Os01g48060.1",0.84439135,0.84496546,1.4074059,1.0322542,0.00803228,1025,0.00803228,0.012777362253802,0.031431683004878,"Yes"]
["Os04g0266400","Os04g0266400","LOC_Os04g19684.1",0.8250923,0.76481533,1.507155,1.0323542,0.030376932,2735,0.030376932,0.0340937422089254,0.0445491313535649,"Yes"]
["Os02g0518800","Os02g0518800","LOC_Os02g31920.1",1.5946856,0.97477245,0.533,1.0341526,0.035887703,3061,0.035887703,0.0381575666915981,0.047025670281934,"Yes"]
["Os05g0200100","Os05g0200100","LOC_Os05g11090.1",1.4663162,0.4680767,1.1686687,1.0343539,0.035633232,3052,0.035633232,0.03804537521815,0.0468299126972477,"Yes"]
["Os04g0208800","Os04g0208800","None",0.5294647,1.1142335,1.4612005,1.0349662,0.020247491,2081,0.020247491,0.0259411618050361,0.0390257983666506,"Yes"]
["Os01g0171000","Os01g0171000","LOC_Os01g07630.1",0.9579849,1.1674099,0.9818454,1.0357467,0.011448706,1362,0.011448706,0.0169783096484667,0.033715682647577,"Yes"]
["GT_Os_A_Specific_0018278","Os06g0472400","LOC_Os06g27800.1",1.3541493,0.8703666,0.89328337,1.0392665,0.0091625,1148,0.0091625,0.0143106457242582,0.0320128810975609,"Yes"]
["GT_Os_A_Specific_0086228","Os12g0601200","LOC_Os12g40880.1",1.2032452,0.6476407,1.2679071,1.0395976,0.0212355,2143,0.0212355,0.0267140363999002,0.0397459591693887,"Yes"]
["Os09g0546900","Os09g0546900","LOC_Os09g37480.1",1.2658472,0.59342957,1.2595863,1.039621,0.0117458,1390,0.0117458,0.0173273497880827,0.0338938156834532,"Yes"]
["Os06g0623300","Os06g0623300","LOC_Os06g41810.1",0.90790653,0.8569927,1.35532,1.040073,0.0041808453,570,0.004180845,7.10545998504113E-3,0.0294199461315789,"Yes"]
["Os08g0481800","Os08g0481800","LOC_Os08g37600.1",1.0900497,0.6469574,1.3861752,1.0410608,0.035572827,3048,0.035572827,0.037995512341062,0.046811879625,"Yes"]
["GT_Os_A_Specific_0033757","Os03g0758400","LOC_Os03g55110.1",1.6217318,0.44630527,1.058157,1.0420647,0.03874633,3211,0.03874633,0.0400274245823984,0.0483997289411398,"Yes"]
["Os03g0299900","Os03g0299900","LOC_Os03g18810.1",0.41062737,1.1304703,1.5899763,1.0436913,0.037748005,3156,0.037748005,0.0393418100224383,0.0479744131986692,"Yes"]
["GT_Os_A_Specific_0002152","Os05g0491200","LOC_Os05g41220.1",1.0332756,1.3603163,0.73962307,1.044405,0.009684896,1196,0.009684896,0.0149090002493143,0.0324800316521739,"Yes"]
["GT_Os_A_Specific_0059026","Os09g0281300","LOC_Os09g10910.1",1.2774425,0.7431617,1.1138859,1.04483,0.021405192,2157,0.021405192,0.0268885564697083,0.039803535054242,"Yes"]
["Os12g0484700","Os12g0484700","LOC_Os12g29960.1",0.7578511,1.2370515,1.1398163,1.0449063,0.009087422,1137,0.009087422,0.0141735228122662,0.0320577393509234,"Yes"]
["Os10g0421500","Os10g0421500","LOC_Os10g28570.1",1.3304687,0.4340849,1.3737307,1.0460948,0.038663406,3205,0.038663406,0.0399526302667664,0.0483865589597503,"Yes"]
["Os07g0461600","Os07g0461600","LOC_Os07g27760.1",1.0704122,0.7942896,1.2766359,1.0471126,0.007971626,1017,0.007971626,0.012677636499626,0.0314397167020649,"Yes"]
["Os12g0118400","Os12g0118400","LOC_Os12g02589.1",0.6494827,0.8466339,1.6491632,1.0484266,0.024496702,2376,0.024496702,0.0296185489902767,0.0413536497146464,"Yes"]
["Os12g0210200","Os12g0210200","LOC_Os12g10720.1",0.7161455,1.0884361,1.3410869,1.0485562,0.015435752,1693,0.015435752,0.0211044627274993,0.0365698767111636,"Yes"]
["Os03g0175600","Os03g0175600","LOC_Os03g07910.1",0.69760895,0.6966462,1.7601385,1.0514646,0.041002493,3341,0.041002493,0.0416479680877586,0.0492250821379826,"Yes"]
["Os01g0916400","Os01g0916400","LOC_Os01g68770.1",1.3020306,0.7857523,1.0704641,1.052749,0.02933309,2661,0.02933309,0.0331712789827973,0.04421459,"Yes"]
["Os05g0457100","Os05g0457300","None",1.0209522,0.8908086,1.2509727,1.0542445,0.022290055,2222,0.022290055,0.0276988282223884,0.0402364584180918,"Yes"]
["Os02g0510200","Os02g0510200","LOC_Os02g30630.1",1.1435099,0.47901917,1.5419798,1.0548363,0.03665894,3109,0.03665894,0.0387559212166542,0.0472946311804438,"Yes"]
["Os03g0828500","Os03g0828500","LOC_Os03g61280.1",0.61227036,1.2575655,1.2949276,1.0549212,0.013519029,1537,0.013519029,0.019159810521067,0.0352796521268705,"Yes"]
["Os03g0272400","Os03g0272400","LOC_Os03g16580.1",0.8002691,1.0366869,1.3314891,1.0561484,2.5879885E-3,363,0.002587989,0.00452505609573672,0.0285962090330578,"Yes"]
["Os01g0174100","Os01g0174100","LOC_Os01g07890.1",1.3952308,0.6028261,1.173554,1.0572037,0.013753699,1559,0.013753699,0.0194340563450511,0.0353855591334188,"Yes"]
["Os02g0654000","Os02g0654000","LOC_Os02g43710.1",1.1721506,0.6509743,1.3535514,1.0588921,0.037762415,3157,0.037762415,0.0393542757417103,0.0479775250443459,"Yes"]
["GT_Os_A_Specific_0024323","Os03g0159900","LOC_Os03g06390.1",0.5893326,1.4282494,1.1592255,1.0589358,0.013720919,1554,0.013720919,0.0193717277486911,0.0354148044459459,"Yes"]
["Os06g0104000","Os06g0104000","LOC_Os06g01460.1",0.952827,0.6799321,1.5471377,1.0599656,0.018281177,1923,0.018281177,0.0239715781600598,0.0381309417301092,"Yes"]
["Os02g0461100","Os02g0461100","LOC_Os02g26294.1",1.4349952,0.96216965,0.7846966,1.0606204,0.008842909,1117,0.008842909,0.0139242084268262,0.0317537224700089,"Yes"]
["Os02g0143100","Os02g0143100","LOC_Os02g05030.1",0.9979472,0.7506771,1.4367642,1.0617962,0.017863052,1884,0.017863052,0.0234854151084517,0.0380300963757961,"Yes"]
["Os09g0498000","Os09g0498000","LOC_Os09g32270.1",0.89438677,1.1614652,1.1335206,1.0631242,0.0075948765,973,0.007594877,0.0121291448516579,0.0313083778489208,"Yes"]
["Os01g0918200","Os01g0918200","LOC_Os01g68940.1",1.215929,1.228406,0.74733925,1.0638914,0.042103577,3388,0.042103577,0.0422338568935427,0.049845763679752,"Yes"]
["GT_Os_A_Specific_0080090","Os09g0569780","None",0.91288996,0.7341194,1.5551224,1.0673772,0.038182262,3182,0.038182262,0.0396659187235103,0.0481298092023884,"Yes"]
["Os06g0232200","Os06g0232200","LOC_Os06g12600.1",1.4039183,0.48494148,1.3149595,1.0679398,0.0308969,2770,0.0308969,0.0345300423834455,0.0447391573646209,"Yes"]
["GT_Os_A_Specific_0107600","Os11g0430100","None",0.7059593,1.2595606,1.2384334,1.0679845,0.011011038,1332,0.011011038,0.0166043380703066,0.0331571121756756,"Yes"]
["Os10g0569100","Os10g0569100","LOC_Os10g41950.1",1.6912527,0.92357063,0.59094,1.0685878,0.037041154,3133,0.037041154,0.0390550984791822,0.0474216625260134,"Yes"]
["Os02g0799300","Os02g0799300","LOC_Os02g55590.1",1.0814829,1.2075396,0.91791916,1.0689806,0.0008242531,118,0.000824253,0.00147095487409623,0.0280176168050847,"Yes"]
["Os07g0172600","Os07g0172600","LOC_Os07g07620.1",0.7996359,0.77581835,1.6330042,1.0694861,0.032140892,2863,0.032140892,0.0356893542757417,0.0450286824352078,"Yes"]
["Os10g0484700","Os10g0484700","LOC_Os10g34350.1",0.9782572,0.6903539,1.5433941,1.0706683,0.018667549,1951,0.018667549,0.0243206182996758,0.0383780312860071,"Yes"]
["Os08g0506500","Os08g0506500","LOC_Os08g39600.1",0.97243214,0.63142204,1.608459,1.0707711,0.03468506,3002,0.03468506,0.0374220892545499,0.0463430298667554,"Yes"]
["Os07g0669100","Os07g0669100","LOC_Os07g47290.1",0.6329975,1.0862646,1.4942827,1.0711817,0.031063467,2788,0.031063467,0.0347544253303415,0.0446899448124103,"Yes"]
["GT_Os_A_Specific_0010932","Os02g0570300","None",1.4452162,0.9725628,0.7976241,1.0718011,0.007643536,982,0.007643536,0.0122413363251059,0.0312201862484725,"Yes"]
["Os01g0830100","Os01g0830100","LOC_Os01g61410.1",1.3840218,0.92092514,0.9113903,1.0721124,0.0030434376,420,0.003043438,0.00523560209424083,0.0290648329,"Yes"]
["Os09g0462100","Os09g0462100","LOC_Os09g28740.1",1.581027,0.5816884,1.0567999,1.0731717,0.027853686,2584,0.027853686,0.0322114185988531,0.0432357331834365,"Yes"]
["GT_Os_A_Specific_0073510","Os09g0424850","None",0.5860095,1.2010026,1.4353175,1.0741099,0.018663574,1950,0.018663574,0.0243081525804038,0.0383895360584615,"Yes"]
["Os02g0195500","Os02g0195500","LOC_Os02g10190.1",1.386919,0.85919094,0.9777312,1.0746137,0.021157324,2136,0.021157324,0.0266267763649962,0.0397294131853932,"Yes"]
["GT_Os_A_Specific_0010840","Os03g0214200","LOC_Os03g11550.1",1.1290159,1.2422485,0.8526473,1.0746373,0.0045792684,634,0.004579268,0.00790326601844926,0.0289707317791798,"Yes"]
["GT_Os_A_Specific_0296937","Os02g0560700","None",1.1754532,0.80511475,1.2456679,1.0754119,0.0125995455,1446,0.012599546,0.0180254300673148,0.0349493630746887,"Yes"]
["Os01g0750900","Os01g0750900","None",1.0846424,0.7309909,1.4142151,1.0766162,0.0370632,3135,0.0370632,0.0390800299177262,0.0474196156937799,"Yes"]
["Os12g0195100","Os12g0195100","LOC_Os12g09320.1",0.9433603,1.2186375,1.071167,1.0777216,0.022159144,2213,0.022159144,0.0275866367489404,0.0401628226769091,"Yes"]
["Os02g0208400","Os02g0208400","None",1.3407488,1.1222634,0.7763815,1.0797979,0.013642166,1548,0.013642166,0.019296933433059,0.0353480153914728,"Yes"]
["Os07g0182400","Os07g0182400","LOC_Os07g08460.1",1.3250332,0.48474455,1.4316635,1.0804805,0.03699795,3130,0.03699795,0.0390177013213662,0.0474117499840255,"Yes"]
["GT_Os_A_Specific_0250913","Os12g0159600","LOC_Os12g06260.1",1.1236944,0.8372278,1.2812052,1.0807091,2.447131E-3,336,2.447131E-3,0.00418848167539267,0.0292126263125,"Yes"]
["Os11g0237700","Os11g0237700","LOC_Os11g13420.1",1.2466087,0.70658875,1.2945156,1.082571,0.026107227,2469,0.026107227,0.0307778608825729,0.0424123481154313,"Yes"]
["Os04g0278000","Os04g0278000","LOC_Os04g20920.1",1.4784651,0.7665982,1.0065703,1.0838779,0.020806134,2117,0.020806134,0.0263899276988282,0.0394205968228625,"Yes"]
["Os11g0139700","Os11g0139700","LOC_Os11g04409.1",1.5729103,0.8465376,0.8342476,1.0845652,0.014976097,1660,0.014976097,0.0206930939915233,0.0361862199198795,"Yes"]
["GT_Os_A_Specific_0006155","Os08g0430700","LOC_Os08g33390.1",1.2443805,0.8294058,1.2026563,1.0921475,0.01096275,2048,0.019844808,0.02552979306906,0.0388659789492187,"Yes"]
["GT_Os_A_Specific_0031882","Os09g0507701","None",0.98843575,1.6150632,0.6770835,1.0935274,0.020837232,2119,0.020837232,0.0264148591373722,0.0394422546257668,"Yes"]
["GT_Os_A_Specific_0028110","Os01g0144340","None",1.1709166,1.1381922,0.9731524,1.094087,0.0036354316,503,0.003635432,0.006270256793817,0.0289894985129224,"Yes"]
["Os03g0800500","Os03g0800500","LOC_Os03g58620.1",1.027381,0.9016447,1.3588295,1.0959517,0.026456019,2489,0.026456019,0.0310271752680129,0.0426336248328646,"Yes"]
["Os04g0249700","Os04g0249700","None",0.77987623,1.1975956,1.3161259,1.0978659,0.010243414,1249,0.010243414,0.0155696833707304,0.0328953831497197,"Yes"]
["Os04g0547900","Os04g0547900","LOC_Os04g46280.1",1.3760719,0.7583761,1.1597233,1.0980572,0.017569631,1867,0.017569631,0.0232734978808277,0.0377460042533476,"Yes"]
["Os03g0823400","Os03g0823400","LOC_Os03g60840.1",0.9944229,1.0260897,1.2751226,1.0985451,0.0037500816,521,0.003750082,0.00649463974071303,0.0288705929021113,"Yes"]
["Os05g0542300","Os05g0542300","LOC_Os05g46470.1",0.7754488,1.3880162,1.1333623,1.0989424,0.04051032,3318,0.04051032,0.0413612565445026,0.0489713362025316,"Yes"]
["Os03g0266000","Os03g0266000","LOC_Os03g15930.1",1.3528466,0.4901533,1.4567018,1.0999006,0.022216683,2219,0.022216683,0.0276614310645724,0.0401582314164037,"Yes"]
["Os08g0101600","Os08g0101600","LOC_Os08g01130.1",1.0625935,0.8939028,1.352181,1.1028924,0.024246989,2359,0.024246989,0.0294066317626527,0.0412270762522255,"Yes"]
["Os08g0300100","Os08g0300100","LOC_Os08g20500.1",1.5120773,0.5442066,1.2572932,1.1045257,0.020458778,2098,0.020458778,0.0261530790326601,0.0391135169485224,"Yes"]
["Os01g0552100","Os01g0552100","None",1.212604,0.5507312,1.5537429,1.1056927,0.02007661,2059,0.02007661,0.0256669159810521,0.039109899324915,"Yes"]
["Os03g0715600","Os03g0715600","LOC_Os03g50760.1",0.88115215,1.2181487,1.2179976,1.1057662,0.0061764354,816,0.006176435,0.0101720269259536,0.0303599029227941,"Yes"]
["Os06g0208800","Os06g0208800","LOC_Os06g10660.1",1.1035776,1.0157714,1.2076011,1.1089834,0.0055397893,752,0.005539789,0.0093742208925455,0.0295479969135638,"Yes"]
["Os06g0500300","Os06g0500300","LOC_Os06g30480.1",0.8159065,1.1761208,1.3366213,1.1095495,0.0410124,3342,0.0410124,0.0416604338070306,0.0492222430879712,"Yes"]
["Os01g0229900","Os01g0229900","LOC_Os01g12950.1",1.4700203,0.66948223,1.190722,1.1100749,0.008486489,1072,0.008486489,0.0133632510595861,0.0317530852416044,"Yes"]
["Os04g0103700","Os04g0103700","LOC_Os04g01320.1",1.4012494,0.71105623,1.2255793,1.1126283,0.025262184,2418,0.025262184,0.0301421091997008,0.0419051364863523,"Yes"]
["Os07g0507200","Os07g0507200","LOC_Os07g32390.1",0.75652456,1.502697,1.0825648,1.1139288,0.007981951,1019,0.007981951,0.01270256793817,0.0314186510902845,"Yes"]
["Os01g0633100","Os01g0633100","LOC_Os01g44220.1",1.374042,0.6887388,1.2812657,1.1146822,0.0077106385,993,7.710639E-3,0.0123784592370979,0.0311453907643504,"Yes"]
["GT_Os_A_Specific_0120632","Os01g0168850","None",1.5833945,0.48109245,1.2812438,1.1152436,0.02595697,2464,0.02595697,0.0307155322862129,0.0422538176420454,"Yes"]
["Os01g0779100","Os01g0778800","LOC_Os01g57073.1",1.4288826,0.5664978,1.351018,1.1154661,0.042424753,3406,0.042424753,0.0424582398404388,0.0499605649685848,"Yes"]
["Os01g0779100","Os01g0779100","LOC_Os01g57082.1",1.4288826,0.5664978,1.351018,1.1154661,0.042424753,3407,0.042424753,0.0424707055597108,0.0499459008755503,"Yes"]
["Os05g0566700","Os05g0566700","LOC_Os05g49164.1",1.4166341,0.6364317,1.2937937,1.1156198,0.016080704,1750,0.016080704,0.0218150087260034,0.036856973568,"Yes"]
["Os12g0155200","Os12g0155200","LOC_Os12g05900.1",1.0491648,1.0112906,1.2885857,1.116347,0.0017586603,255,1.75866E-3,0.0031787584143605,0.0276626872941176,"Yes"]
["GT_Os_A_Specific_0364165","Os04g0311400","LOC_Os04g24600.1",1.2153487,0.87953186,1.2560673,1.1169826,0.014917079,1568,0.013853672,0.0195462478184991,0.03543818775,"Yes"]
["Os06g0544100","Os06g0544100","LOC_Os06g35200.1",0.5881548,1.2309289,1.5362706,1.1184515,0.025144147,2411,0.025144147,0.0300548491647968,0.041830432856491,"Yes"]
["Os01g0915600","Os01g0915600","LOC_Os01g68700.1",1.6009645,0.8418932,0.9144726,1.1191101,0.025564304,2436,0.025564304,0.0303664921465968,0.0420929488275862,"Yes"]
["Os10g0116400","Os10g0116400","LOC_Os10g02690.1",1.6216083,0.6696625,1.068624,1.119965,0.018077334,1899,0.018077334,0.0236724008975317,0.0381822994597156,"Yes"]
["Os06g0594100","Os06g0594100","LOC_Os06g39344.1",0.7159114,1.2274299,1.4174113,1.1202508,0.021319732,2147,0.021319732,0.0267638992769882,0.0398292711001397,"Yes"]
["GT_Os_A_Specific_0103197","Os01g0746000","LOC_Os01g54230.1",0.52557945,1.4518166,1.3869061,1.1214341,0.04174226,3375,0.04174226,0.0420718025430067,0.0496083569955555,"Yes"]
["Os01g0701900","Os01g0701900","LOC_Os01g50616.1",1.1057563,0.901124,1.3586359,1.1218387,0.00838552,1059,0.00838552,0.0132011967090501,0.031760453937677,"Yes"]
["Os01g0199700","Os01g0199700","LOC_Os01g10260.1",1.7121301,0.68024635,0.97874784,1.1237081,0.021059312,2131,0.021059312,0.0265644477686362,0.0396381513054903,"Yes"]
["Os09g0433600","Os09g0433600","LOC_Os09g26340.1",1.3715196,0.7272043,1.2780957,1.1256065,0.037155632,3139,0.037155632,0.0391298927948142,0.0474772984874163,"Yes"]
["Os07g0675200","Os07g0675200","LOC_Os07g47840.1",0.9345398,1.1239796,1.3230395,1.1271863,0.014056839,1584,0.014056839,0.0197456993268511,0.0355946851193181,"Yes"]
["GT_Os_A_Specific_0057705","Os02g0638900","LOC_Os02g42590.1",1.2810812,1.1925716,0.91626024,1.129971,0.026838755,2515,0.026838755,0.031351283969085,0.0428032788489065,"Yes"]
["Os01g0859400","Os01g0859400","LOC_Os01g64010.1",1.1666889,1.2411299,0.9834595,1.130426,0.011809394,1394,0.011809394,0.0173772126651707,0.0339795404117647,"Yes"]
["Os04g0495300","Os04g0495300","LOC_Os04g41800.1",1.0701399,0.59355736,1.7314587,1.1317186,0.038868044,3223,0.038868044,0.0401770132136624,0.0483709973577412,"Yes"]
["Os01g0972200","Os08g0533900","LOC_Os08g42150.1",1.4025207,0.5255327,1.4686861,1.1322465,0.02458689,2382,0.02458689,0.0296933433059087,0.0414013500377833,"Yes"]
["Os04g0527000","Os04g0527000","LOC_Os04g44510.1",0.7754812,1.1316652,1.4898939,1.1323467,0.040581923,3321,0.040581923,0.0413986537023186,0.0490135781851851,"Yes"]
["Os10g0514400","Os10g0514400","LOC_Os10g37034.1",1.2390761,0.7550945,1.4040198,1.1327301,0.013052219,1496,0.013052219,0.0186487160309149,0.0349949534819518,"Yes"]
["GT_Os_A_Specific_0528599","Os04g0550500","LOC_Os04g46460.1",0.8511152,1.3377986,1.2200775,1.1363305,0.040747706,3327,0.040747706,0.0414734480179506,0.0491250522290351,"Yes"]
["Os11g0586300","Os11g0586300","LOC_Os11g37560.1",1.0707765,1.2917647,1.048482,1.1370077,1.691101E-3,242,1.691101E-3,0.00301670406382448,0.0280289508719008,"Yes"]
["Os02g0174000","Os02g0174000","LOC_Os02g07770.1",0.6489663,1.7974949,0.96797514,1.1381454,0.033404425,2932,0.033404425,0.0365494889055098,0.0456975268332196,"Yes"]
["GT_Os_A_Specific_0034066","Os05g0100016","LOC_Os05g00994.1",1.240408,0.9043393,1.2723856,1.1390443,0.006553838,855,0.006553838,0.0106581899775617,0.0307455487929824,"Yes"]
["GT_Os_A_Specific_0069630","Os10g0105933","LOC_Os10g01660.1",0.6182871,1.3289986,1.4788413,1.1420423,0.025183715,2412,0.025183715,0.0300673148840688,0.0418788892475124,"Yes"]
["Os12g0181300","Os12g0181300","LOC_Os12g08070.1",1.1220942,1.4638414,0.8407879,1.1422411,0.007294223,944,0.007294223,0.0117676389927698,0.0309927208188559,"Yes"]
["Os01g0819100","Os01g0819100","LOC_Os01g60330.1",0.8908057,1.3222876,1.2156539,1.1429157,0.036899302,3123,0.036899302,0.0389304412864622,0.0473913225494716,"Yes"]
["Os04g0668000","Os04g0668000","LOC_Os04g57240.1",0.8111415,1.0202556,1.5977936,1.1430635,0.037679505,3154,0.037679505,0.0393168785838942,0.0479177217993024,"Yes"]
["Os04g0488200","Os04g0488300","None",1.2760248,0.67563725,1.4804902,1.1440507,0.030733831,2760,0.030733831,0.0344053851907255,0.0446642739641304,"Yes"]
["Os04g0488200","Os04g0488200","LOC_Os04g41120.1",1.2760248,0.67563725,1.4804902,1.1440507,0.030733831,2761,0.030733831,0.0344178509099975,0.0446480971173487,"Yes"]
["Os02g0716500","Os02g0716500","LOC_Os02g48560.1",1.6180897,0.7481127,1.0723944,1.1461989,0.03539783,3037,0.03539783,0.03785838942907,0.0467503115344089,"Yes"]
["Os07g0689400","Os07g0689400","LOC_Os07g48970.1",1.3619056,0.6031585,1.4739265,1.1463302,0.013772422,1562,0.013772422,0.0194714535028671,0.0353656751869398,"Yes"]
["GT_Os_A_Specific_0013571","Os05g0461350","None",1.0709071,0.7764015,1.59448,1.1472629,0.008543146,1083,0.008543146,0.0135003739715781,0.0316404049916897,"Yes"]
["Os11g0526900","Os11g0526900","LOC_Os11g32369.1",0.893301,0.77060986,1.7778873,1.147266,0.04122988,3350,0.04122988,0.0417601595612066,0.0493650891582089,"Yes"]
["Os06g0661400","Os06g0661400","LOC_Os06g45050.1",1.2451272,0.86839104,1.3336921,1.1490701,0.0021657422,303,2.165742E-3,0.0037771129394166,0.0286692777623762,"Yes"]
["Os12g0225200","Os12g0225200","LOC_Os12g12370.1",0.96610117,1.2397013,1.2482095,1.1513373,0.0002651956,41,0.000265196,0.000511094490152081,0.0259439306341463,"Yes"]
["Os08g0510800","Os08g0510800","LOC_Os08g39990.1",0.88729525,0.66468906,1.904911,1.1522985,0.04008459,3294,0.04008459,0.0410620792819745,0.0488097421038251,"Yes"]
["GT_Os_A_Specific_0197326","Os04g0690932","None",0.93202925,1.2441764,1.2833581,1.1531879,0.00705226,920,0.00705226,0.0114684617302418,0.0307463205,"Yes"]
["Os09g0460400","Os09g0460400","LOC_Os09g28630.1",0.9632926,1.333736,1.1629725,1.1533337,0.020082384,2061,0.020082384,0.0256918474195961,0.039083184,"Yes"]
["Os07g0479100","Os07g0479100","LOC_Os07g29600.1",1.3316135,0.94109917,1.1885519,1.1537548,0.0026006978,365,0.002600698,0.00454998753428072,0.0285791771999999,"Yes"]
["Os09g0104200","Os09g0104200","LOC_Os09g01680.1",1.1027246,0.9894891,1.371161,1.1544582,0.03163949,2823,0.03163949,0.0351907255048616,0.0449543019447396,"Yes"]
["GT_Os_A_Specific_0376249","Os12g0510000","LOC_Os12g32544.1",1.6121607,0.8031616,1.0519199,1.1557474,0.011610329,1381,0.011610329,0.0172151583146347,0.0337212379572773,"Yes"]
["Os10g0485300","Os10g0485300","LOC_Os10g34400.1",1.4077768,0.9246683,1.1377673,1.1567374,0.00769273,992,0.00769273,0.0123659935178259,0.0311043750302419,"Yes"]
["GT_Os_A_Specific_0042902","Os02g0177900","LOC_Os02g08130.1",1.5633249,0.56207514,1.3456068,1.1570023,0.027719377,2578,0.027719377,0.0321366242832211,0.0431273937730799,"Yes"]
["Os08g0260000","Os08g0260000","LOC_Os08g16010.1",1.4191275,0.4727869,1.5944595,1.1621246,0.031164506,2794,0.031164506,0.0348292196459735,0.044739024182534,"Yes"]
["Os01g0705300","Os01g0705300","LOC_Os01g50930.1",1.3533802,0.55663013,1.5767813,1.1622639,0.022031184,2207,0.022031184,0.0275118424333084,0.0400394558332578,"Yes"]
["GT_Os_A_Specific_0427204","Os02g0697500","LOC_Os02g46980.1",1.523603,0.84496737,1.1244397,1.1643367,0.03215091,2866,0.03215091,0.0357267514335577,0.0449955687404047,"Yes"]
["GT_Os_A_Specific_0070419","Os11g0562600","None",0.7077913,1.1700726,1.6203909,1.1660849,0.025224052,2415,0.025224052,0.0301047120418848,0.0418938602782608,"Yes"]
["Os09g0512200","Os09g0512200","LOC_Os09g33740.1",0.8785076,0.8766303,1.7442465,1.1664615,0.040954556,3337,0.040954556,0.0415981052106706,0.0492264681198681,"Yes"]
["Os07g0540200","Os07g0540200","LOC_Os07g35600.1",0.7223244,1.2078338,1.5700531,1.1667371,0.01586773,1730,0.01586773,0.0215656943405634,0.0367892861445086,"Yes"]
["GT_Os_A_Specific_0044516","Os03g0842700","LOC_Os03g62580.1",1.4277844,1.0215154,1.0519509,1.1670836,0.012378819,78,0.000467593,0.000972326103216155,0.0240450708076923,"Yes"]
["Os10g0437000","Os10g0437000","LOC_Os10g30080.1",1.1029949,0.82303524,1.5762081,1.1674128,0.021533148,2165,0.021533148,0.0269882822238843,0.0398935134540415,"Yes"]
["Os07g0227200","Os07g0227200","LOC_Os07g12470.1",0.8641348,0.92073774,1.724761,1.1698779,0.01728813,1849,0.01728813,0.0230491149339316,0.0375028066143861,"Yes"]
["Os02g0790600","Os02g0790600","LOC_Os02g54830.1",1.0174766,1.5705051,0.92195606,1.1699792,0.022380885,2230,0.022380885,0.0277985539765644,0.0402554841860986,"Yes"]
["Os12g0151900","Os12g0151900","None",1.6363859,0.577621,1.2985792,1.1708621,0.02921256,2657,0.02921256,0.0331214161057093,0.0440992014151298,"Yes"]
["Os02g0173100","Os02g0173100","LOC_Os02g07680.1",1.3510666,1.1753383,0.9931431,1.1731826,0.035728507,3055,0.035728507,0.0380827723759661,0.0469090152461538,"Yes"]
["Os01g0231000","Os01g0231000","LOC_Os01g13030.1",0.67893267,1.4591484,1.3820233,1.1733681,0.020191293,2073,0.020191293,0.0258414360508601,0.0390676682214182,"Yes"]
["Os01g0914100","Os01g0914100","LOC_Os01g68580.1",1.2206192,0.77544975,1.531868,1.175979,0.005803825,782,0.005803825,0.00974819247070556,0.0297687238810741,"Yes"]
["Os12g0563200","Os12g0563200","LOC_Os12g37610.1",0.9587536,0.8652315,1.7047405,1.1762419,0.011575445,1374,0.011575445,0.0171278982797307,0.0337912007969432,"Yes"]
["GT_Os_A_Specific_0014364","Os03g0830950","None",1.4950633,1.1678085,0.8677888,1.1768869,0.014454122,1623,0.014454122,0.0202318623784592,0.0357211850536044,"Yes"]
["Os03g0195900","Os03g0195900","None",1.0272198,0.8446231,1.6631308,1.1783246,0.010670533,1293,0.010670533,0.0161181750186985,0.0331009341554524,"Yes"]
["osa-miR166e","osa-miR166e","No hit",1.5250444,1.1065769,0.906281,1.1793008,0.034059063,2968,0.034059063,0.0369982547993019,0.0460279318372641,"Yes"]
["Os07g0247100","Os07g0247100","LOC_Os07g14350.1",1.3403282,0.6608286,1.5392723,1.180143,0.015188337,1672,0.015188337,0.0208426826227873,0.0364356577194976,"Yes"]
["Os04g0455800","Os04g0455800","LOC_Os04g38330.1",1.5556307,0.5515747,1.4349937,1.1807331,0.02000792,2056,0.02000792,0.0256295188232361,0.0390329606614785,"Yes"]
["Os02g0623500","Os02g0623500","LOC_Os02g41470.1",1.1673965,0.69972515,1.6854453,1.184189,0.016029358,1742,0.016029358,0.0217152829718274,0.0369080108714121,"Yes"]
["Os04g0488000","Os04g0488000","LOC_Os04g41100.1",1.1405892,0.7882767,1.6243138,1.1843933,0.015959319,1737,0.015959319,0.0216529543754674,0.0368525207305699,"Yes"]
["Os12g0286200","Os12g0286200","LOC_Os12g18810.1",1.005682,1.4830375,1.0646405,1.1844534,0.023048278,2277,0.023048278,0.0283844427823485,0.0406001945797101,"Yes"]
["GT_Os_A_Specific_0006857","Os05g0193800","LOC_Os05g10570.1",1.3910213,0.87261057,1.2936764,1.1857694,0.028410105,2605,0.028410105,0.0324731987035652,0.0437439275067178,"Yes"]
["Os04g0611800","Os04g0611800","LOC_Os04g52230.1",1.5806675,0.70089674,1.2811689,1.1875777,0.02483166,2392,0.02483166,0.0298180004986287,0.0416387074665551,"Yes"]
["Os03g0272900","Os03g0272900","LOC_Os03g16600.1",1.2483039,0.7204385,1.5948968,1.1878797,0.03158554,2820,0.03158554,0.0351533283470456,0.0449253904042553,"Yes"]
["Os06g0608000","Os06g0608000","LOC_Os06g40580.1",1.2334962,0.9937968,1.3367705,1.1880212,0.016776815,1807,0.016776815,0.0225255547245076,0.0372395157526286,"Yes"]
["Os11g0160600","Os11g0160600","LOC_Os11g06180.1",1.000556,0.74853945,1.8149953,1.1880302,0.036696326,3112,0.036696326,0.0387933183744702,0.0472972248026992,"Yes"]
["Os08g0533600","Os08g0533600","LOC_Os08g42100.1",1.3773289,0.82585,1.3630586,1.1887459,0.017889624,1886,0.017889624,0.0235103465469957,0.0380462788250265,"Yes"]
["Os08g0424500","Os08g0424500","LOC_Os08g32870.1",0.965199,1.1056647,1.5004125,1.1904254,0.017907882,1887,0.017907882,0.0235228122662677,0.0380649256502384,"Yes"]
["Os09g0345700","Os09g0345700","LOC_Os09g17680.1",1.4672174,0.5717201,1.5348902,1.191276,0.026786014,2508,0.026786014,0.031264023934181,0.0428383979880382,"Yes"]
["GT_Os_A_Specific_0002347","Os08g0413850","LOC_Os08g31910.1",1.3033972,0.80497265,1.4683871,1.1922523,0.0049736304,682,0.00497363,0.00850162054350536,0.0292510702785923,"Yes"]
["Os01g0770500","Os01g0770500","LOC_Os01g56400.1",1.1118641,0.77539253,1.690342,1.1925329,0.032126926,2862,0.032126926,0.0356768885564697,0.0450248428322851,"Yes"]
["Os01g0121700","Os01g0121700","LOC_Os01g03144.1",1.434432,0.7943735,1.3500853,1.1929636,0.013902368,1572,0.013902368,0.0195961106955871,0.0354722633893129,"Yes"]
["Os12g0169600","Os12g0169600","LOC_Os12g07210.1",1.5719271,0.42504835,1.5893874,1.1954542,0.03846922,3195,0.03846922,0.0398279730740463,0.0482942226666666,"Yes"]
["Os03g0184000","Os03g0184000","LOC_Os03g08570.1",1.2986317,0.96364784,1.3273106,1.19653,0.0017511193,252,1.751119E-3,0.0031413612565445,0.0278719774166666,"Yes"]
["Os07g0411200","Os07g0411200","LOC_Os07g22840.1",1.2947745,0.98924065,1.3109775,1.1983309,7.112857E-4,109,0.000711286,0.00135876340064821,0.0261740196880733,"Yes"]
["Os01g0553600","Os01g0553600","LOC_Os01g37280.1",1.409133,0.847301,1.3413463,1.1992601,0.006079937,807,0.006079937,0.0100598354525056,0.0302188690297397,"Yes"]
["Os11g0448400","Os11g0448400","LOC_Os11g26160.1",1.1402273,0.7518406,1.7071705,1.1997461,0.020975545,2125,0.020975545,0.0264896534530042,0.0395919581152941,"Yes"]
["Os08g0430800","Os08g0430800","LOC_Os08g33400.1",0.79583645,0.9577966,1.8473997,1.2003442,0.022804212,2260,0.022804212,0.0281725255547245,0.0404724311203539,"Yes"]
["Os06g0185100","Os06g0185100","LOC_Os06g08600.1",1.1935215,0.8655729,1.5438309,1.2009751,0.0035275456,491,0.003527546,0.00612066816255298,0.0288166741466395,"Yes"]
["Os01g0319000","Os01g0319000","LOC_Os01g21630.1",0.6923928,1.0632696,1.8482318,1.2012981,0.036680702,3111,0.036680702,0.0387808526551982,0.0472922840636451,"Yes"]
["Os01g0788800","Os01g0788800","LOC_Os01g57890.1",0.9981642,0.86045647,1.7515321,1.2033843,0.017577311,1868,0.017577311,0.0232859636000997,0.03774228823394,"Yes"]
["GT_Os_A_Specific_0019666","Os04g0503500","LOC_Os04g42470.1",0.59283113,1.8557205,1.1616802,1.2034106,0.028494751,2612,0.028494751,0.0325604587384692,0.0437566792729709,"Yes"]
["GT_Os_A_Specific_0085194","Os05g0129000","LOC_Os05g03820.1",1.499515,0.90238714,1.212717,1.2048731,0.016809264,1810,0.016809264,0.0225629518823236,0.0372497004994475,"Yes"]
["Os05g0101600","Os05g0101600","LOC_Os05g01120.1",0.64460945,1.064249,1.9086981,1.2058522,0.029685829,2687,0.029685829,0.0334953876838693,0.0443133085668031,"Yes"]
["Os02g0126900","Os02g0126900","None",1.409719,0.62564564,1.5826693,1.2060113,0.029102158,2649,0.029102158,0.0330216903515332,0.0440652154541336,"Yes"]
["Os01g0227100","Os01g0227100","LOC_Os01g12710.1",1.2334776,1.4017744,0.9858322,1.207028,0.0289087,2641,0.0289087,0.0329219645973572,0.0439048828852707,"Yes"]
["Os09g0487700","Os09g0487700","LOC_Os09g31280.1",1.2664967,0.64916277,1.7168441,1.2108345,0.01706698,1830,0.01706698,0.0228122662677636,0.0374074627213114,"Yes"]
["GT_Os_A_Specific_0090351","Os02g0535000","LOC_Os02g33149.1",1.1522427,0.94439745,1.535882,1.2108407,0.0040812884,3107,0.036628794,0.0387309897781102,0.0472861579446411,"Yes"]
["Os02g0174300","Os02g0174300","LOC_Os02g07800.1",0.5935507,1.1933727,1.8460984,1.2110072,0.027167756,2539,0.027167756,0.031650461231613,0.042918420368649,"Yes"]
["Os03g0198900","Os03g0198900","LOC_Os03g10220.1",1.8552251,0.5849786,1.1954265,1.2118767,0.02936799,2667,0.02936799,0.0332460732984293,0.044167607007874,"Yes"]
["Os01g0935600","Os01g0935600","LOC_Os01g70950.1",1.174943,1.1834183,1.2793941,1.2125851,0.00039174862,62,0.000391749,0.000772874594864123,0.0253436328870967,"Yes"]
["Os02g0729500","Os02g0729500","LOC_Os02g49690.1",0.5709281,1.1425996,1.9249501,1.2128259,0.037954874,3169,0.037954874,0.0395038643729743,0.0480394444979488,"Yes"]
["Os01g0814100","Os01g0814100","LOC_Os01g59870.1",1.7080183,0.77713346,1.1559463,1.2136993,0.026947645,2526,0.026947645,0.031488406881077,0.042789787844418,"Yes"]
["GT_Os_A_Specific_0045020","Os08g0299000","LOC_Os08g20270.1",1.3800688,0.95301867,1.3083019,1.2137965,0.0010425277,155,1.042528E-3,1.9321864871603E-3,0.0269779342451612,"Yes"]
["Os01g0953400","Os01g0953400","LOC_Os01g72410.1",1.491118,1.0521464,1.0994058,1.2142234,0.028732324,2626,0.028732324,0.0327349788082772,0.043886272492003,"Yes"]
["Os03g0112900","Os03g0112900","LOC_Os03g02180.1",1.1306438,1.1971207,1.3300371,1.2192672,0.04224658,3395,0.04224658,0.0423211169284467,0.0499119388453608,"Yes"]
["Os12g0605800","Os12g0605800","LOC_Os12g41250.1",1.3615408,1.1714029,1.1273022,1.2200819,0.006768182,884,0.006768182,0.0110196958364497,0.030709477377828,"Yes"]
["Os01g0113200","Os01g0113200","LOC_Os01g02290.1",1.5571241,1.0712352,1.0372066,1.2218553,0.0238723,2336,0.0238723,0.0291199202193966,0.0409896383989726,"Yes"]
["Os08g0269500","Os08g0269500","LOC_Os08g16810.1",1.4329772,0.48340464,1.7493243,1.221902,0.039832894,3281,0.039832894,0.0409000249314385,0.0486954397543431,"Yes"]
["GT_Os_A_Specific_0003608","Os10g0465000","LOC_Os10g32770.1",1.0372038,1.4929924,1.1370945,1.2224302,0.02523145,2416,0.02523145,0.0301171777611568,0.0418888021316225,"Yes"]
["GT_Os_A_Specific_0046565","Os03g0855700","LOC_Os03g63870.1",1.490109,1.0378532,1.1423135,1.2234253,3.7009672E-3,1068,0.008437962,0.0133133881824981,0.0316897617808988,"Yes"]
["Os02g0101400","Os02g0101400","LOC_Os02g01140.1",1.8074374,0.8155861,1.050005,1.2243428,0.021433236,2160,0.021433236,0.0269259536275243,0.0398003285166666,"Yes"]
["GT_Os_A_Specific_0228602","Os07g0481000","LOC_Os07g29770.1",1.5604787,0.8635473,1.2497725,1.2245995,0.019667301,2023,0.019667301,0.02521815008726,0.0389943372768166,"Yes"]
["Os06g0639500","Os06g0639500","LOC_Os06g43270.1",1.2238569,1.0586848,1.396564,1.2263685,0.0039914213,555,0.003991421,0.0069184741959611,0.0288461074432432,"Yes"]
["GT_Os_A_Specific_0004685","Os08g0424200","LOC_Os08g32850.1",1.2473006,1.3392634,1.094686,1.2270833,1.1464799E-3,169,0.00114648,0.00210670655696833,0.027210244260355,"Yes"]
["GT_Os_A_Specific_0106989","Os03g0201400","LOC_Os03g10420.1",0.9364052,1.5787101,1.1729865,1.2293673,0.022375345,2229,0.022375345,0.0277860882572924,0.0402635750538358,"Yes"]
["Os09g0563800","Os09g0563800","LOC_Os09g39034.1",1.3725276,0.65088224,1.6658573,1.2297558,0.017391965,1854,0.017391965,0.0231114435302917,0.0376263061569579,"Yes"]
["Os04g0577300","Os04g0577300","LOC_Os04g48800.1",1.3598299,0.8328419,1.5104446,1.2343721,0.030912368,2775,0.030912368,0.0345923709798055,0.044680903801081,"Yes"]
["GT_Os_A_Specific_0024226","Os06g0687450","LOC_Os06g47294.1",1.6445045,0.63537264,1.4250765,1.2349845,0.017090332,1834,0.017090332,0.0228621291448516,0.0373769474656488,"Yes"]
["Os05g0582300","Os05g0582300","LOC_Os05g50550.1",1.7364011,0.70358944,1.2676682,1.2358862,0.024401633,2371,0.024401633,0.0295562203939167,0.0412800295078026,"Yes"]
["Os07g0684700","Os07g0684700","None",1.0576797,1.3234172,1.327117,1.2360712,3.13739E-4,48,3.13739E-4,0.000598354525056095,0.0262168151875,"Yes"]
["Os01g0190300","Os01g0190300","LOC_Os01g09450.1",1.5067825,1.0936594,1.108325,1.2362556,1.0225689E-3,148,0.001022569,0.00184492645225629,0.02771300175,"Yes"]
["Os04g0177400","Os04g0177400","LOC_Os04g09810.1",1.8242784,1.3773656,0.51324797,1.2382973,0.03908058,3231,0.03908058,0.0402767389678384,0.0485150747075208,"Yes"]
["Os02g0119000","Os02g0119000","None",1.4613318,0.9503865,1.3066678,1.239462,0.006165103,815,0.006165103,0.0101595612066816,0.0303413842122699,"Yes"]
["Os06g0140700","Os06g0140700","LOC_Os06g04870.1",1.6404128,0.45057726,1.6275163,1.2395021,0.050810196,1512,0.013227126,0.018848167539267,0.0350886259166666,"Yes"]
["Os08g0424100","Os08g0424100","LOC_Os08g32840.1",1.2734289,0.90046406,1.5454597,1.2397842,0.0036714552,511,0.003671455,0.00636998254799302,0.0288184070547945,"Yes"]
["GT_Os_A_Specific_0050359","Os02g0788500","LOC_Os02g54710.1",1.296597,0.6710496,1.7526855,1.2401108,0.030883677,2768,0.030883677,0.0345051109449015,0.0447523224158237,"Yes"]
["Os07g0165700","Os07g0165700","LOC_Os07g07150.1",1.0261974,1.6722083,1.0238504,1.2407521,0.010555937,1287,0.010555937,0.0160433807030665,0.0328981066876456,"Yes"]
["Os03g0412900","Os03g0412900","LOC_Os03g29960.1",1.1115785,1.4587083,1.1545444,1.2416104,0.00050843426,84,0.000508434,0.00104712041884816,0.0242777235,"Yes"]
["GT_Os_A_Specific_0169195","Os10g0369950","None",0.85867786,1.9619174,0.905529,1.2420415,0.04219105,3392,0.04219105,0.0422837197706307,0.049890419089033,"Yes"]
["GT_Os_A_Specific_0013239","Os09g0411650","LOC_Os09g24530.1",1.0128899,0.7886033,1.9358482,1.2457805,0.03178554,2840,0.03178554,0.0354026427324856,0.0448914792042253,"Yes"]
["GT_Os_A_Specific_0148386","Os10g0163100","LOC_Os10g07994.1",0.9790821,1.296783,1.4648952,1.2469201,3.2662614E-3,455,0.003266261,0.0056719022687609,0.0287933469692307,"Yes"]
["GT_Os_A_Specific_0055501","Os07g0627700","LOC_Os07g43460.1",0.93623877,1.6833713,1.1226807,1.2474302,0.022102686,1915,0.018222304,0.0238718524058838,0.038166924983812,"Yes"]
["Os02g0524800","Os02g0524800","None",1.2137179,1.2656012,1.2653995,1.2482395,0.014644469,1637,0.014644469,0.0204063824482672,0.0358820801215638,"Yes"]
["Os03g0251700","Os03g0251700","LOC_Os03g14710.1",1.4013219,1.0233126,1.3224101,1.2490149,0.0009165633,131,0.000916563,1.63300922463226E-3,0.0280636197938931,"Yes"]
["Os12g0183300","Os12g0183300","LOC_Os12g08280.1",0.6248479,1.1210074,2.0027366,1.2495307,0.03970331,3272,0.03970331,0.0407878334579905,0.0486705306876528,"Yes"]
["Os12g0136600","Os12g0136600","LOC_Os12g04210.1",1.084454,1.7544718,0.91100216,1.249976,0.015836092,1729,0.015836092,0.0215532286212914,0.0367371688906882,"Yes"]
["GT_Os_A_Specific_0451648","Os08g0152300","LOC_Os08g05610.1",1.2110002,1.0788298,1.4614267,1.2504189,0.0022181575,309,2.218158E-3,0.00385190725504861,0.0287929829708737,"Yes"]
["GT_Os_A_Specific_0180256","Os06g0638100","LOC_Os06g43130.1",1.1529837,1.1844282,1.416523,1.2513117,0.0011523486,171,1.152349E-3,0.00213163799551234,0.0270296598771929,"Yes"]
["Os05g0266900","Os05g0266900","LOC_Os05g18274.1",1.205615,1.1647696,1.3924541,1.2542796,0.0006492619,99,0.000649262,0.00123410620792819,0.0263049483030303,"Yes"]
["Os05g0438600","Os05g0438600","LOC_Os05g36270.1",1.13973,1.8426747,0.78335094,1.2552519,0.016868677,1816,0.016868677,0.0226377461979556,0.0372578543210352,"Yes"]
["Os01g0336300","Os01g0336300","LOC_Os01g23440.1",1.4976754,0.76100206,1.5075283,1.255402,0.023083344,2281,0.023083344,0.0284343056594365,0.0405906588268303,"Yes"]
["Os06g0662200","Os06g0662200","LOC_Os06g45140.1",0.85169125,1.3634768,1.5548611,1.2566763,0.029380249,2669,0.029380249,0.0332710047369733,0.0441529332105657,"Yes"]
["Os06g0351500","Os06g0351500","LOC_Os06g24404.1",0.9497018,1.0591397,1.7623353,1.257059,0.024436288,2373,0.024436288,0.0295811518324607,0.0413038142300885,"Yes"]
["Os10g0538500","Os03g0745400","None",1.3952541,0.89776707,1.4787035,1.2572416,0.0025346929,354,0.002534693,0.0044128646222887,0.0287193605169491,"Yes"]
["Os01g0743600","Os01g0743600","LOC_Os01g54040.1",0.7739754,1.5189552,1.4809685,1.2579664,0.013778077,1563,0.013778077,0.0194839192221391,0.0353575603627639,"Yes"]
["Os04g0206200","Os04g0206200","LOC_Os04g12920.1",1.2783718,0.7595339,1.7370052,1.2583036,0.022000141,2868,0.0321512,0.0357516828721017,0.0449645966527196,"Yes"]
["GT_Os_A_Specific_0041147","Os08g0483200","LOC_Os08g37700.1",1.0820694,0.84944916,1.8456202,1.2590462,0.028410867,2606,0.028410867,0.0324856644228372,0.0437283144808135,"Yes"]
["Os01g0100400","Os01g0100400","LOC_Os01g01030.1",0.73699284,1.1891785,1.8584304,1.2615339,0.023283413,2296,0.023283413,0.0286212914485165,0.0406749867347561,"Yes"]
["GT_Os_A_Specific_0068352","Os11g0496600","LOC_Os11g30370.1",1.2205911,1.2331538,1.3316493,1.261798,0.027378222,2551,0.027378222,0.031800049862877,0.0430474513688749,"Yes"]
["GT_Os_A_Specific_0105837","Os01g0243700","LOC_Os01g14140.1",1.3259134,1.1420102,1.3179407,1.2619548,7.653869e-05,1210,0.009799181,0.0150835203191224,0.0324830702404958,"Yes"]
["Os01g0505500","Os01g0504950","LOC_Os01g32090.1",1.0272918,0.8617568,1.8974619,1.2621702,0.025757696,2453,0.025757696,0.0305784093742208,0.0421174556282103,"Yes"]
["Os08g0167000","Os08g0167000","LOC_Os08g07010.1",1.6373968,0.73361206,1.4190779,1.2633623,0.029960161,2715,0.029960161,0.0338444278234854,0.044261585919337,"Yes"]
["GT_Os_A_Specific_0037720","Os05g0588250","LOC_Os05g51070.1",1.5609236,0.9017782,1.3280468,1.2635828,0.018616555,1947,0.018616555,0.0242707554225878,0.0383518243990755,"Yes"]
["Os01g0277100","Os01g0277100","LOC_Os01g16990.1",0.59523535,1.420671,1.7772317,1.2643794,0.024317475,2365,0.024317475,0.0294814260782847,0.0412420263107822,"Yes"]
["Os01g0801000","Os01g0801000","LOC_Os01g58680.1",1.0719614,0.77069664,1.954782,1.2658134,0.032729905,2894,0.032729905,0.0360757915731737,0.0453626983258465,"Yes"]
["Os07g0434500","Os07g0434500","LOC_Os07g25390.1",1.5122867,0.91482115,1.3719077,1.2663385,0.0043419297,597,0.00434193,7.44203440538519E-3,0.0291716603517587,"Yes"]
["Os09g0529900","Os09g0529900","LOC_Os09g36030.1",1.2274384,0.83639956,1.748527,1.2707883,0.028099144,2596,0.028099144,0.0323610072301171,0.0434151258027735,"Yes"]
["Os09g0450600","Os09g0450600","LOC_Os09g27730.1",0.9630728,0.88983583,1.9599376,1.2709488,0.041233324,3351,0.041233324,0.0417726252804786,0.0493544800250671,"Yes"]
["Os_A_Specific_0084523","Os02g0119250","None",0.8473563,1.311069,1.654696,1.2710404,0.0052776304,717,0.00527763,0.00893792071802543,0.0295238130125523,"Yes"]
[58700,"Os07g0630900","LOC_Os07g43710.1",0.41629744,1.740016,1.6571798,1.2711644,0.041718114,3373,0.041718114,0.0420468711044627,0.0496090587767565,"Yes"]
["GT_Os_A_Specific_0065426","Os02g0326000","LOC_Os02g22060.1",1.611556,0.4945488,1.7077088,1.2712712,0.041193336,3348,0.041193336,0.0417352281226626,0.0493507976989247,"Yes"]
["Os02g0635000","Os02g0635000","LOC_Os02g42330.1",1.5037613,0.8261504,1.4909515,1.2736211,7.132551E-3,924,7.132551E-3,0.0115183246073298,0.0309617554772727,"Yes"]
["Os08g0300300","Os08g0300300","LOC_Os08g20570.1",1.6073322,0.57316303,1.6429873,1.2744942,0.039250597,3238,0.039250597,0.0403639990027424,0.0486207981985793,"Yes"]
["Os01g0757800","Os01g0757800","LOC_Os01g55300.1",0.4447527,1.5347652,1.8534186,1.2776455,0.036144983,3075,0.036144983,0.0383320867614061,0.0471471631912195,"Yes"]
["Os10g0388600","Os10g0388600","LOC_Os10g24954.1",1.0376601,0.90040255,1.8950663,1.2777096,0.024655392,2385,0.024655392,0.0297307404637247,0.0414644768603773,"Yes"]
["GT_Os_A_Specific_0012609","Os01g0293800","None",0.869328,1.5131397,1.4586511,1.280373,0.020133926,2066,0.020133926,0.0257541760159561,0.0390886627231364,"Yes"]
["Os03g0732200","Os10g0185100","None",1.2207823,0.94415474,1.6778231,1.28092,6.460543E-3,840,6.460543E-3,0.0104712041884816,0.030849092825,"Yes"]
["Os03g0732200","Os03g0732200","LOC_Os03g52230.1",1.2207823,0.94415474,1.6778231,1.28092,6.460543E-3,841,6.460543E-3,0.0104836699077536,0.0308124113828775,"Yes"]
["Os12g0582000","Os12g0582000","LOC_Os12g39240.1",1.9045444,0.60985136,1.3308172,1.2817377,0.03211079,2859,0.03211079,0.0356394913986537,0.0450494503987408,"Yes"]
["Os08g0526700","Os08g0526700","LOC_Os08g41500.1",1.5585504,0.8024416,1.4844337,1.2818085,0.0320845,2858,0.0320845,0.0356270256793817,0.045028316829951,"Yes"]
["Os04g0435700","Os04g0435700","LOC_Os04g35570.1",0.84871006,1.1158628,1.8861504,1.2835745,0.0151995355,1673,0.015199536,0.0208551483420593,0.0364407285690376,"Yes"]
["Os05g0447200","Os05g0447200","LOC_Os05g37470.1",0.9989104,1.0494328,1.8030009,1.2837814,0.040132526,3297,0.040132526,0.0410994764397905,0.0488236462802547,"Yes"]
["Os04g0632400","Os04g0632400","None",1.1358676,1.2095194,1.5072172,1.2842014,0.005589735,755,0.005589735,0.0094116180503615,0.0296959299139072,"Yes"]
["Os12g0574400","Os12g0574400","LOC_Os12g38590.1",1.7034369,0.8359523,1.3154173,1.2849355,0.011045894,1335,0.011045894,0.0166417352281226,0.0331873264674157,"Yes"]
["GT_Os_A_Specific_0078391","Os01g0836400","LOC_Os01g61930.1",1.597436,0.90133524,1.3607898,1.2865204,0.03479386,3007,0.03479386,0.0374844178509099,0.0464110982573994,"Yes"]
["Os03g0807400","Os03g0807400","LOC_Os03g59264.1",0.9518852,1.0549359,1.8527741,1.2865318,0.029982997,2716,0.029982997,0.0338568935427574,0.0442790136108247,"Yes"]
["Os02g0681000","Os02g0681000","LOC_Os02g45690.1",1.5339952,1.0871134,1.2388277,1.2866454,1.4986894E-3,215,0.001498689,0.00268012964348042,0.0279592631581395,"Yes"]
["Os04g0450600","Os04g0450600","LOC_Os04g37760.1",1.283503,0.86448145,1.7128978,1.2869607,0.013202954,1510,0.013202954,0.018823236100723,0.0350708930423841,"Yes"]
["Os12g0578400","Os12g0578400","LOC_Os12g38920.1",1.3937559,1.4742794,0.9994526,1.2891626,0.029884396,2708,0.029884396,0.0337571677885814,0.0442637785657311,"Yes"]
["Os12g0446900","Os12g0446900","LOC_Os12g26060.1",1.4342422,1.5874748,0.8529687,1.291562,0.03396153,2965,0.03396153,0.0369608576414859,0.045942562168634,"Yes"]
["Os01g0194200","Os01g0194200","LOC_Os01g09790.1",1.4508247,1.0812159,1.3501692,1.2940699,0.0067929565,890,0.006792957,0.0110944901520817,0.0306141017157303,"Yes"]
["GT_Os_A_Specific_0069990","Os08g0233300","LOC_Os08g13630.1",1.3363647,0.9815016,1.5653858,1.2944174,0.042522218,2093,0.020392308,0.0260907504363001,0.0390795735250836,"Yes"]
["Os04g0670200","Os04g0670200","LOC_Os04g57440.1",1.1928949,1.5243979,1.1673532,1.2948819,3.7862624E-3,525,0.003786262,0.00654450261780104,0.0289270416799999,"Yes"]
["Os06g0703300","Os06g0703300","LOC_Os06g49000.1",1.4284573,1.2770042,1.179496,1.2949859,6.5526166E-3,854,0.006552617,0.0106457242582897,0.030775815909836,"Yes"]
["Os04g0389500","Os04g0389500","LOC_Os04g31971.1",1.1232224,1.0172124,1.7464943,1.295643,0.018518986,1940,0.018518986,0.0241834953876838,0.0382884808484536,"Yes"]
["GT_Os_A_Specific_0040317","Os09g0511000","LOC_Os09g33630.1",1.7370477,1.190187,0.9608536,1.2960294,0.011609395,1380,0.011609395,0.0172026925953627,0.0337429589456521,"Yes"]
["Os01g0902700","Os01g0902700","LOC_Os01g67630.1",1.3559108,1.1712751,1.3653493,1.2975117,0.030559923,2747,0.030559923,0.0342433308401894,0.0446217150174736,"Yes"]
["Os05g0252100","Os05g0252100","LOC_Os05g16300.1",1.1651859,0.6932378,2.0347786,1.2977341,0.034509897,2992,0.034509897,0.0372974320618299,0.0462631005571524,"Yes"]
["Os06g0678700","Os06g0678700","LOC_Os06g46480.1",1.7977295,1.0099239,1.0906787,1.2994441,0.028414464,2607,0.028414464,0.0324981301421092,0.0437170752220943,"Yes"]
["GT_Os_A_Specific_0010998","Os09g0107400","LOC_Os09g02000.1",1.5589752,1.0579796,1.2817421,1.2995657,0.018713322,1954,0.018713322,0.0243580154574919,0.0384130678311156,"Yes"]
["GT_Os_A_Specific_0011618","Os09g0125400","LOC_Os09g03810.1",1.4144292,1.529643,0.9601383,1.3014035,0.0054213936,738,0.005421394,0.00919970082273747,0.02946505600813,"Yes"]
["Os11g0140700","Os11g0140700","LOC_Os11g04490.1",0.9622674,1.0047221,1.9416838,1.3028911,0.035864033,3058,0.035864033,0.0381201695337821,0.0470407574764552,"Yes"]
["Os04g0253000","Os04g0253000","LOC_Os04g18090.1",1.4055395,1.7763958,0.73119545,1.304377,0.017176187,1841,0.017176187,0.0229493891797556,0.037421882703422,"Yes"]
["Os07g0679300","Os07g0679300","LOC_Os07g48160.1",1.037693,1.7459841,1.1303005,1.3046592,0.039265238,3239,0.039265238,0.0403764647220144,0.0486239177579499,"Yes"]
["Os09g0130800","Os09g0130800","LOC_Os09g04440.1",1.5497155,0.8385272,1.5277634,1.3053354,0.00711778,921,0.00711778,0.0114809274495138,0.030998279674267,"Yes"]
["Os01g0256800","Os01g0256800","LOC_Os01g15300.1",1.579207,0.7982683,1.5446019,1.3073591,0.012210959,1425,0.012210959,0.0177636499626028,0.0343706361747368,"Yes"]
["Os04g0107300","Os04g0107300","LOC_Os04g01660.1",0.87082577,0.96112394,2.0971875,1.3097124,0.03185015,2842,0.03185015,0.0354275741710296,0.0449510737684729,"Yes"]
["GT_Os_A_Specific_0126955","Os01g0580000","LOC_Os01g39800.1",1.1692166,1.2036791,1.5618048,1.3115668,0.0023804626,436,0.00313929,0.00543505360259287,0.0288800279587155,"Yes"]
["GT_Os_A_Specific_0025590","Os12g0178633","LOC_Os12g07874.1",1.0353842,0.81968737,2.081255,1.3121089,0.0355153,3045,0.0355153,0.037958115183246,0.0467822227586206,"Yes"]
["Os01g0930800","Os01g0930800","LOC_Os01g70520.1",1.1523767,1.6218467,1.1638174,1.3126802,0.0015599291,223,1.559929E-3,0.00277985539765644,0.0280577364080717,"Yes"]
["Os03g0163100","Os03g0163100","LOC_Os03g06720.1",1.2534757,1.3648586,1.3203864,1.3129069,0.00037315933,59,0.000373159,7.35477437048117E-4,0.0253684872711864,"Yes"]
["GT_Os_A_Specific_0011401","Os07g0580900","LOC_Os07g39270.1",1.5401869,0.81504345,1.5954475,1.3168926,9.1417115E-3,1345,0.01124433,0.0167663924208426,0.0335323476802974,"Yes"]
["Os04g0127800","Os04g0127800","LOC_Os04g03860.1",1.3625989,1.2346053,1.3560457,1.31775,0.00027938126,43,0.000279381,0.000536025928696085,0.0260603997906976,"Yes"]
["Os12g0540900","Os12g0540900","LOC_Os12g35570.1",0.85366917,1.735795,1.3689013,1.3194551,0.014006075,1580,0.014006075,0.0196958364497631,0.0355559283702531,"Yes"]
["Os12g0597400","Os12g0597400","LOC_Os12g40540.1",1.1448812,0.9692292,1.8480377,1.320716,0.018354751,1929,0.018354751,0.0240463724756918,0.0381653220637636,"Yes"]
["Os02g0158800","Os02g0158800","LOC_Os02g06400.1",1.3936853,0.7702346,1.7986035,1.3208412,0.02527796,2419,0.02527796,0.0301545749189728,0.041913971707317,"Yes"]
["Os12g0619000","Os12g0619000","LOC_Os12g42430.1",0.741951,1.2212844,2.0044136,1.3225497,0.026393924,2485,0.026393924,0.0309773123909249,0.0426020238084507,"Yes"]
["Os09g0276600","Os09g0276600","None",1.301619,1.227346,1.4394445,1.3228031,0.0026996124,381,0.002699612,0.00474943904263276,0.0284203247559055,"Yes"]
["Os08g0116900","Os08g0116900","LOC_Os08g02370.1",1.2023196,1.2437782,1.5253553,1.3238177,0.0002827185,45,0.000282719,0.000560957367240089,0.0251996868666666,"Yes"]
["Os04g0118100","Os04g0118100","LOC_Os04g02780.1",1.3932648,0.850564,1.7287674,1.3241987,0.035979662,3068,0.035979662,0.0382448267265021,0.0470385998311603,"Yes"]
["Os03g0308200","Os03g0308200","LOC_Os03g19520.1",1.4242468,0.86926556,1.6804008,1.3246378,0.026955018,2527,0.026955018,0.031500872600349,0.0427845576565096,"Yes"]
["GT_Os_A_Specific_0004447","Os02g0669000","LOC_Os02g44860.1",1.2233348,0.6579962,2.0965476,1.3259596,0.03173844,2834,0.03173844,0.0353278484168536,0.0449198598588567,"Yes"]
["Os02g0821500","Os02g0821600","LOC_Os02g57570.1",0.8773298,1.4704094,1.6341822,1.3273071,0.018709755,1952,0.018709755,0.0243330840189478,0.0384450959554303,"Yes"]
["Os01g0630900","Os01g0630900","LOC_Os01g44020.1",1.4393244,1.2871652,1.2563052,1.3275982,0.018279573,1922,0.018279573,0.0239591124407878,0.0381474335603538,"Yes"]
["Os03g0295300","Os03g0295300","LOC_Os03g18400.1",1.1356001,1.1194029,1.7346878,1.3298969,0.01876025,1961,0.01876025,0.0244452754923959,0.0383719340897501,"Yes"]
["Os12g0267200","Os12g0267200","LOC_Os12g16650.1",0.9692912,1.3488884,1.671588,1.3299226,0.006195002,817,0.006195002,0.0101844926452256,0.0304138959877601,"Yes"]
["Os02g0187600","Os02g0187600","LOC_Os02g09470.1",1.6141996,0.9034252,1.4722538,1.3299595,4.5489883E-3,628,0.004548988,0.00782847170281725,0.0290541255859872,"Yes"]
["Os02g0220400","Os02g0220400","LOC_Os02g12790.1",0.61366606,1.4248219,1.9524527,1.3303136,0.03882066,3219,0.03882066,0.0401271503365744,0.0483720619012115,"Yes"]
["Os05g0324100","Os05g0324100","LOC_Os05g25870.1",1.411015,0.91511154,1.665246,1.3304576,3.6418238E-3,506,0.003641824,0.006307653951633,0.0288682926166007,"Yes"]
["Os08g0526200","Os08g0526200","LOC_Os08g41460.8",1.358233,0.8561516,1.7783589,1.3309145,0.009771028,1206,0.009771028,0.0150336574420344,0.0324971752139303,"Yes"]
["Os03g0788200","Os03g0788200","LOC_Os03g57420.1",1.2273502,1.0375891,1.7326565,1.3325319,0.03803682,3171,0.03803682,0.0395287958115183,0.048112798807947,"Yes"]
["GT_Os_A_Specific_0123396","Os06g0240050","LOC_Os06g13240.1",0.9905486,1.3935304,1.620862,1.3349804,0.013321601,1521,0.013321601,0.018960359012715,0.0351301391262327,"Yes"]
["Os05g0452800","Os05g0452800","LOC_Os05g37900.1",0.9107466,1.6545839,1.4430928,1.3361411,0.025767684,2454,0.025767684,0.0305908750934928,0.04211661798044,"Yes"]
["Os06g0704600","Os06g0704600","LOC_Os06g49110.1",1.5376873,0.76473427,1.7086296,1.337017,0.013450924,1530,0.013450924,0.019072550486163,0.0352625203686274,"Yes"]
["Os01g0618100","Os01g0618100","LOC_Os01g43090.1",0.64577246,1.7557635,1.6124763,1.3380041,0.019475937,2007,0.019475937,0.025018698578908,0.038922761986547,"Yes"]
["Os01g0136600","Os01g0136600","None",2.019824,0.9480572,1.0561137,1.3413316,0.03227711,2875,0.03227711,0.0358389429070057,0.045030778507826,"Yes"]
["Os06g0609900","Os06g0609900","LOC_Os06g40750.1",1.9666262,0.8518262,1.2128019,1.3437514,0.01911598,1977,0.01911598,0.0246447270007479,0.0387831035811836,"Yes"]
["Os05g0455500","Os05g0455500","LOC_Os05g38150.1",1.4178486,1.566288,1.0471735,1.34377,0.0011653543,174,1.165354E-3,0.00216903515332834,0.0268634189310344,"Yes"]
["GT_Os_A_Specific_0112634","Os10g0521450","None",1.0043826,1.14433,1.8861191,1.344944,0.01083164,1307,0.01083164,0.0162926950885066,0.0332407865646518,"Yes"]
["Os_A_Specific_0011819","Os05g0514800","LOC_Os05g43895.1",1.1035318,1.518547,1.4151788,1.3457526,0.039158028,3236,0.039158028,0.0403390675641984,0.0485361094894932,"Yes"]
["Os01g0233000","Os01g0233000","LOC_Os01g13210.1",1.274579,1.136282,1.6277199,1.3461937,1.861E-3,267,1.861E-3,0.00332834704562453,0.0279568202247191,"Yes"]
["Os04g0477500","Os04g0477500","LOC_Os04g40150.1",1.606761,0.9163537,1.5186849,1.3472666,0.015298926,1680,0.015298926,0.0209424083769633,0.036526185825,"Yes"]
["Os12g0272500","Os12g0272500","None",0.80348396,1.8958607,1.3545117,1.3512855,0.023143569,2286,0.023143569,0.0284966342557965,0.0406075482322834,"Yes"]
["GT_Os_A_Specific_0239582","Os04g0649051","LOC_Os04g55555.1",1.7918811,0.9477253,1.3145161,1.3513741,0.019706542,2025,0.019706542,0.025243081525804,0.0390335505985185,"Yes"]
["Os01g0636500","Os01g0636500","LOC_Os01g44970.1",1.2512207,1.7621288,1.0473781,1.3535758,0.0034636944,479,0.003463694,0.00597107953128895,0.0290039178162839,"Yes"]
["Osa-miR166a","Os10g0517050","None",1.7556586,1.627656,0.67754936,1.3536214,0.020786107,2114,0.020786107,0.0263525305410122,0.0394385407649006,"Yes"]
["osa-miR166a","osa-miR166a","No hit",1.7556586,1.627656,0.67754936,1.3536214,0.020786107,2115,0.020786107,0.0263649962602842,0.0394198937007092,"Yes"]
["Os01g0206700","Os01g0206700","LOC_Os01g10890.1",1.1551595,1.168189,1.7416706,1.3550063,0.034898147,3012,0.034898147,0.03754674644727,0.046472930815737,"Yes"]
["Os08g0515600","Os08g0515600","None",0.95167446,1.1896634,1.9245257,1.3552879,0.022536103,2244,0.022536103,0.0279730740463724,0.0402817776885026,"Yes"]
["GT_Os_A_Specific_0036319","Os02g0318600","LOC_Os02g21350.1",1.7024026,0.7826252,1.5814285,1.3554854,0.022629537,2249,0.022629537,0.0280354026427324,0.0403588585624722,"Yes"]
["Os10g0509200","Os10g0509200","None",1.7852468,0.60842466,1.673851,1.3558408,0.031866197,2843,0.031866197,0.0354400398903016,0.0449579022747098,"Yes"]
["Os01g0802000","Os01g0802000","LOC_Os01g58780.1",1.6249123,1.1527729,1.2920847,1.3565899,0.0017692129,257,0.001769213,0.00320368985290451,0.0276121141750972,"Yes"]
["Os02g0513800","Os02g0513800","LOC_Os02g30974.1",1.4612088,1.1712389,1.4473128,1.3599201,0.012172218,1423,0.012172218,0.0177387185240588,0.0343097444820801,"Yes"]
["Os06g0695700","Os06g0695700","LOC_Os06g48050.1",1.772583,0.5485258,1.7645001,1.3618697,0.03330022,2920,0.03330022,0.0363999002742458,0.0457421857602739,"Yes"]
["Os08g0120200","Os08g0120200","LOC_Os08g02670.1",1.9306674,1.0045576,1.1593909,1.364872,0.00980866,1212,0.00980866,0.0151084517576664,0.0324608376732673,"Yes"]
["GT_Os_A_Specific_0175868","Os11g0334938","None",1.3894081,1.2570329,1.4489417,1.3651276,0.0010399688,154,1.039969E-3,1.9197207678883E-3,0.0270864653181818,"Yes"]
["Os02g0640500","Os02g0640500","LOC_Os02g42780.1",1.6278787,1.3671656,1.1005492,1.3651978,0.019146124,1980,0.019146124,0.0246821241585639,0.0387854057393939,"Yes"]
["Os01g0120300","Os01g0120300","LOC_Os01g03020.1",1.1858063,0.97812176,1.9337654,1.3658978,0.022495644,2242,0.022495644,0.0279481426078284,0.0402453292078501,"Yes"]
["Os04g0106400","Os04g0106400","LOC_Os04g01600.1",1.4629288,0.7552209,1.8871326,1.3684274,0.014318499,1606,0.014318499,0.0200199451508352,0.035760584986924,"Yes"]
["GT_Os_A_Specific_0112722","Os03g0281201","LOC_Os03g17260.1",1.9079819,0.818367,1.3794012,1.3685833,0.027273094,2547,0.027273094,0.031750186985789,0.0429495013875147,"Yes"]
["GT_Os_A_Specific_0074886","Os10g0468950","None",1.4231973,1.1703529,1.5210719,1.3715407,0.00040096793,64,0.000400968,0.000797806033408127,0.0251294163749999,"Yes"]
["GT_Os_A_Specific_0170553","Os07g0616750","None",1.5483708,1.0951171,1.4755988,1.3730289,0.00087063515,123,0.000870635,1.53328347045624E-3,0.028391195,"Yes"]
["Os01g0970600","Os01g0970600","LOC_Os01g73900.1",1.7593255,0.9737611,1.3869057,1.3733307,0.004673185,642,0.004673185,0.00800299177262528,0.0291964875934579,"Yes"]
["Os01g0368700","Os01g0368700","LOC_Os01g27120.1",0.68600464,1.3582268,2.0760212,1.3734175,0.028546942,2615,0.028546942,0.0325978558962852,0.043786533216826,"Yes"]
["Os10g0370500","Os10g0370500","LOC_Os10g22520.1",1.7689285,1.112978,1.2388935,1.3736,0.012642077,1450,0.012642077,0.0180752929444028,0.0349706005841379,"Yes"]
["GT_Os_A_Specific_0004687","Os01g0584032","None",1.0925236,1.2038131,1.8256979,1.3740115,0.017189553,1844,0.017189553,0.0229867863375716,0.0373900743400216,"Yes"]
["Os10g0391500","Os10g0391500","None",1.2831631,1.0616975,1.7777195,1.3741933,0.006243805,823,0.006243805,0.0102592869608576,0.0304300144046172,"Yes"]
["Os02g0594800","Os02g0594800","LOC_Os02g38130.1",1.5757189,1.2310987,1.3168817,1.3745664,4.9054753E-3,673,0.004905475,0.00838942907005734,0.0292360478826151,"Yes"]
["Os01g0745400","Os01g0745400","None",1.647234,0.886179,1.59269,1.3753676,0.007914492,1012,0.007914492,0.012615307903266,0.0313686041620553,"Yes"]
["Os04g0538100","Os04g0538100","LOC_Os04g45490.1",1.3484879,0.82805824,1.9514809,1.376009,0.019589977,2015,0.019589977,0.025118424333084,0.0389952346138957,"Yes"]
["Os02g0179100","Os02g0179100","LOC_Os02g08260.1",1.4067965,0.924572,1.8007612,1.3773766,0.006492987,851,0.006492987,0.0106083271004736,0.030603256001175,"Yes"]
["GT_Os_A_Specific_0013787","Os07g0581366","LOC_Os07g39310.1",1.5547771,1.0963173,1.4831657,1.3780867,0.004992571,685,0.004992571,0.00853901770132136,0.0292338719430656,"Yes"]
["Os04g0501200","Os04g0501200","LOC_Os04g42290.1",1.3064027,1.1137972,1.7147412,1.3783137,0.015641373,1713,0.015641373,0.0213537771129394,0.0366243707548161,"Yes"]
["Os09g0134900","Os09g0134900","LOC_Os09g04924.1",1.2258945,1.1133747,1.7958751,1.3783814,0.0029094554,408,2.909455E-3,5.08601346297681E-3,0.0286025098161764,"Yes"]
["Os03g0641200","Os03g0641200","LOC_Os03g43970.1",1.0290327,1.5376863,1.5690117,1.3785769,0.016788322,1809,0.016788322,0.0225504861630516,0.0372238582321724,"Yes"]
["GT_Os_A_Specific_0049738","Os08g0105800","LOC_Os08g01490.1",1.5611157,1.5191569,1.0600677,1.3801135,0.0022142844,308,2.214284E-3,3.83944153577661E-3,0.0288360166363636,"Yes"]
["Os04g0682300","Os04g0682300","LOC_Os04g58580.1",1.5931749,0.7215972,1.8293467,1.3813729,0.037829235,3161,0.037829235,0.0394041386187983,0.048001601260677,"Yes"]
["Os01g0141600","Os01g0141600","LOC_Os01g04860.1",1.6128464,0.90144396,1.6468687,1.387053,0.012070292,1414,0.012070292,0.0176265270506108,0.0342389966138613,"Yes"]
["Os03g0271400","Os03g0271400","LOC_Os03g16460.1",0.817708,1.4635005,1.882721,1.3879765,0.011424909,1361,0.011424909,0.0169658439291947,0.0336703232909625,"Yes"]
["Os01g0105300","Os01g0105300","LOC_Os01g01560.1",1.7271757,1.009306,1.4303098,1.3889304,3.0780165E-3,426,0.003078017,0.00531039640987284,0.0289810473873239,"Yes"]
["Os05g0105600","Os05g0105600","LOC_Os05g01520.1",2.1226768,0.86895037,1.176611,1.3894128,0.030352144,2733,0.030352144,0.0340688107703814,0.0445453529396267,"Yes"]
["Os02g0562700","Os02g0562700","LOC_Os02g35500.1",1.7459283,1.0143461,1.4100366,1.3901037,0.007449052,963,0.007449052,0.0120044876589379,0.0310261137819314,"Yes"]
["Os07g0112000","Os07g0112000","LOC_Os07g02130.1",1.1994438,1.7271657,1.2448869,1.3904988,0.00294727,409,0.00294727,0.00509847918224881,0.0289034229095354,"Yes"]
["Os05g0404000","Os05g0404000","LOC_Os05g33500.1",1.5124297,0.70561886,1.9540248,1.3906912,0.03955478,3266,0.03955478,0.0407130391423585,0.0485775329393753,"Yes"]
["Os07g0425000","Os07g0425000","LOC_Os07g24230.1",1.8010082,0.5265293,1.8462596,1.3912657,0.036238227,3076,0.036238227,0.0383445524806781,0.0472534227883615,"Yes"]
["Os06g0273500","Os06g0273500","LOC_Os06g16240.1",1.3519778,0.8462932,1.9760346,1.3914353,0.013331985,1522,0.013331985,0.018972824731987,0.0351344230190538,"Yes"]
["Os05g0405000","Os05g0405000","LOC_Os05g33570.1",1.5002785,1.2300653,1.4458618,1.3920685,0.011555355,1371,0.011555355,0.0170905011219147,0.0338063668161925,"Yes"]
["Os06g0534800","Os06g0534800","LOC_Os06g34390.1",1.1310167,1.2693584,1.7779818,1.3927857,0.0068818037,902,6.881804E-3,0.0112440787833458,0.0306019022660753,"Yes"]
["Os09g0508500","Os09g0508500","LOC_Os09g33460.1",1.7936134,0.85000277,1.5365386,1.3933849,0.030179678,2728,0.030179678,0.0340064821740214,0.0443734195227272,"Yes"]
["Os06g0705700","Os06g0705700","LOC_Os06g49220.1",1.527936,0.7568655,1.895381,1.3933941,0.017311275,1853,0.017311275,0.0230989778110197,0.0374719503642741,"Yes"]
["Os03g0762900","Os03g0762900","LOC_Os03g55470.1",1.6323614,1.0402064,1.5095091,1.3940257,1.8036901E-3,262,0.00180369,3.26601844926452E-3,0.027612979351145,"Yes"]
["Os03g0235900","Os03g0235900","LOC_Os03g13274.1",0.9042225,1.3964515,1.8854575,1.3953772,0.030855412,2767,0.030855412,0.0344926452256295,0.0447275235027105,"Yes"]
["Os02g0241600","Os02g0241600","LOC_Os02g14530.1",1.1356592,1.1699252,1.8818145,1.3957996,0.0076468987,983,0.007646899,0.0122538020443779,0.031202148412004,"Yes"]
["Os03g0238600","Os03g0238600","LOC_Os03g13540.1",1.2336545,1.1904845,1.7672267,1.3971219,0.008043934,1026,0.008043934,0.012789827973074,0.0314466074795321,"Yes"]
["GT_Os_A_Specific_0005281","Os04g0431100","LOC_Os04g35180.1",1.3180203,1.1075974,1.7674222,1.3976799,0.0024166154,333,2.416615E-3,0.00415108451757666,0.0291082365315315,"Yes"]
["GT_Os_A_Specific_0019637","Os01g0904200","LOC_Os01g67720.1",1.7223921,0.81609917,1.6554594,1.3979836,0.015429389,2338,0.023890188,0.0291448516579406,0.0409852626467065,"Yes"]
["GT_Os_A_Specific_0116723","Os09g0495000","LOC_Os09g32120.1",1.0319743,1.5270681,1.6366992,1.3985806,0.030935172,2777,0.030935172,0.0346173024183495,0.0446816618264314,"Yes"]
["Os08g0490600","Os08g0490600","LOC_Os08g38270.1",1.7651587,0.6359215,1.7970095,1.3993632,0.026787177,2509,0.026787177,0.031276489653453,0.0428231833188521,"Yes"]
["Os11g0609600","Os11g0609600","LOC_Os11g39540.1",0.83334064,2.2029877,1.171649,1.402659,0.025675528,2446,0.025675528,0.0304911493393168,0.0421032472641046,"Yes"]
["Os07g0277600","Os07g0277600","LOC_Os07g17689.1",1.4941378,1.2949648,1.4223638,1.4038221,0.00012936055,23,0.000129361,0.000286711543256045,0.0225594335217391,"Yes"]
["Os05g0110300","Os05g0110300","LOC_Os05g01970.1",1.546843,0.6800389,1.9938946,1.4069256,0.036538094,3097,0.036538094,0.0386063325853901,0.047321373921214,"Yes"]
["Os12g0144700","Os12g0144700","None",1.0181417,1.5415211,1.6618137,1.4071589,4.2901286E-3,589,0.004290129,0.00734230865120917,0.0292151229524618,"Yes"]
["GT_Os_A_Specific_0010938","Os09g0525400","LOC_Os09g35690.1",1.4186354,1.0707941,1.7386336,1.4093543,9.947249E-3,1224,9.947249E-3,0.0152580403889304,0.0325967448848039,"Yes"]
["GT_Os_A_Specific_0051679","Os01g0109750","LOC_Os01g01970.1",1.5677161,1.100791,1.5609727,1.4098266,0.00227097,318,0.00227097,0.00396409872849663,0.0286442159433962,"Yes"]
["Os05g0137800","Os05g0137800","None",1.5418363,1.2974672,1.3944106,1.4112381,0.021660548,2176,0.021660548,0.0271254051358763,0.0399266810790441,"Yes"]
["Os_A_Specific_0079770","Os10g0163370","LOC_Os10g08026.1",0.6582608,1.4067111,2.1688147,1.4112622,0.038303502,3186,0.038303502,0.0397157816005983,0.0482220171129943,"Yes"]
["Os01g0131900","Os01g0131900","LOC_Os01g04040.1",1.5154085,1.768714,0.9531326,1.4124184,0.02093951,2121,0.02093951,0.0264397905759162,0.0395984793069306,"Yes"]
["Os06g0641800","Os06g0641800","LOC_Os06g43430.1",1.2165394,1.4335775,1.5905085,1.4135418,0.0054153274,734,0.005415327,0.00914983794564946,0.0295924749277929,"Yes"]
["GT_Os_A_Specific_0006483","Os02g0507400","LOC_Os02g30410.1",1.2364998,1.0504975,1.9588828,1.4152933,0.008933947,2501,0.02667809,0.0311767638992769,0.0427852135105957,"Yes"]
["Os12g0539700","Os12g0539700","LOC_Os12g35460.1",1.1415806,1.2514753,1.8539543,1.41567,0.024126297,2352,0.024126297,0.0293193717277486,0.0411439529196428,"Yes"]
["Os12g0549700","Os12g0549700","None",1.0129528,0.9503541,2.2850852,1.4161307,0.03691717,3125,0.03691717,0.0389553727250062,0.0473839260384,"Yes"]
["Os_A_Specific_0076547","Os11g0504900","LOC_Os11g30830.1",0.6423774,1.4285212,2.1775174,1.4161386,0.03543773,3041,0.03543773,0.037908252306158,0.0467414452581387,"Yes"]
["Os02g0273100","Os02g0273100","LOC_Os02g17330.1",2.1089525,1.1216941,1.0196037,1.4167501,0.033384267,2927,0.033384267,0.0364871603091498,0.0457479654721557,"Yes"]
["Os09g0509400","Os09g0509400","LOC_Os09g33520.1",1.9058218,1.5074525,0.83998346,1.4177526,0.051919647,2079,0.020232785,0.0259162303664921,0.039034969040404,"Yes"]
["Os02g0154200","Os02g0154200","LOC_Os02g05980.1",1.6705446,0.9752636,1.6127295,1.4195126,0.02204653,2208,0.02204653,0.0275243081525804,0.0400491991983695,"Yes"]
["Os01g0686100","Os01g0686100","LOC_Os01g49219.1",1.4315562,1.0497165,1.7878251,1.4230326,0.005334319,722,0.005334319,0.00900024931438544,0.0296342846385041,"Yes"]
["Os03g0229000","Os03g0229000","LOC_Os03g12750.1",1.3451214,0.75810957,2.1672459,1.4234923,0.03125539,2801,0.03125539,0.0349164796808775,0.0447573614030703,"Yes"]
["GT_Os_A_Specific_0041482","Os04g0379500","LOC_Os04g31020.1",1.7304702,0.6655984,1.8786712,1.4249133,0.021007016,2130,0.021007016,0.0265519820493642,0.0395582822422535,"Yes"]
["Os02g0114200","Os02g0114200","LOC_Os02g02320.1",0.97840595,1.8393126,1.4573488,1.4250225,0.010440694,1271,0.010440694,0.0158439291947145,0.0329485630479937,"Yes"]
["Os03g0794500","Os03g0794500","LOC_Os03g58040.1",1.3221169,1.8420906,1.1114235,1.4252104,0.0029924298,413,0.00299243,0.00514834205933682,0.0290620744067796,"Yes"]
["Os09g0498200","Os09g0498200","None",1.1923323,1.4521217,1.6319327,1.4254622,0.0043219426,593,4.321943E-3,0.00739217152829718,0.0292332434620573,"Yes"]
["Os04g0382300","Os04g0382300","LOC_Os04g31340.1",0.7918596,1.7246447,1.7634964,1.4266669,0.0128719,1477,0.0128719,0.0184118673647469,0.0349554440758293,"Yes"]
["Os02g0180000","Os02g0180000","LOC_Os02g08364.1",0.98356915,2.1457458,1.151032,1.4267823,0.030341595,2732,0.030341595,0.0340563450511094,0.0445461704044655,"Yes"]
["Os06g0554800","Os06g0554800","LOC_Os06g36090.1",1.5891724,0.6410465,2.0506668,1.4269619,0.042391527,3404,0.042391527,0.0424333084018947,0.0499507681542303,"Yes"]
["Os_A_Specific_0121148","Os01g0520180","LOC_Os01g33615.1",1.1280231,1.1835823,1.9742804,1.4286286,0.03527963,3028,0.03527963,0.037746197955622,0.046732693503963,"Yes"]
["Os02g0464900","Os02g0464900","LOC_Os02g26600.1",1.446322,0.97677183,1.8742642,1.4324527,0.008752949,1111,0.008752949,0.0138494141111942,0.0316004306381638,"Yes"]
["Os02g0464900","Os02g0464700","None",1.446322,0.97677183,1.8742642,1.4324527,0.008752949,1112,0.008752949,0.0138618798304662,0.0315720129847122,"Yes"]
["Os05g0567800","Os05g0567800","LOC_Os05g49270.1",1.153101,1.166357,1.9807787,1.4334122,0.0069793663,916,0.006979366,0.0114185988531538,0.0305613941331877,"Yes"]
["Os06g0486800","Os06g0486800","LOC_Os06g29180.1",0.8000994,1.5777884,1.925992,1.4346266,0.014865369,1651,0.014865369,0.0205809025180752,0.0361144730823743,"Yes"]
["Os04g0474800","Os04g0474800","LOC_Os04g39880.1",1.7558861,1.3865252,1.1618366,1.4347492,0.02788187,2588,0.02788187,0.0322612814759411,0.0432125890919629,"Yes"]
["Os03g0807000","Os03g0807000","LOC_Os03g59225.1",1.868207,1.0470214,1.3896809,1.4349698,0.024553947,2380,0.024553947,0.0296684118673647,0.0413806224441176,"Yes"]
["Os07g0559100","Os07g0559100","LOC_Os07g37290.1",1.7166839,1.1771674,1.411109,1.4349867,0.018308256,1924,0.018308256,0.0239840438793318,0.0381675752681912,"Yes"]
["GT_Os_A_Specific_0175520","Os12g0299150","None",1.1441703,1.5107069,1.653923,1.4362668,0.013751313,1558,0.013751313,0.0194215906257791,0.0354021286540436,"Yes"]
["Os11g0488600","Os11g0488600","LOC_Os11g29700.1",1.8106551,0.6725836,1.8309112,1.4380499,0.030944312,2779,0.030944312,0.0346422338568935,0.0446626971687657,"Yes"]
["Os08g0179000","Os08g0179000","LOC_Os08g08140.1",1.453093,0.93139124,1.9303331,1.4382725,0.013506288,1534,0.013506288,0.019122413363251,0.0353153332255541,"Yes"]
["Os03g0389100","Os03g0389100","LOC_Os03g27190.1",0.64885426,1.4299355,2.241435,1.4400749,0.036537975,3096,0.036537975,0.0385938668661181,0.0473365044331395,"Yes"]
["Os02g0101300","Os02g0101300","LOC_Os02g01130.1",1.7463503,0.76363707,1.8195653,1.4431843,0.019230353,1985,0.019230353,0.0247444527549239,0.0388579072458438,"Yes"]
["Os06g0597000","Os06g0597000","LOC_Os06g39590.1",1.5301723,0.8668928,1.9351854,1.4440836,0.040846325,3332,0.040846325,0.0415357766143106,0.0491700508928571,"Yes"]
["Os03g0597200","Os03g0597200","LOC_Os03g40020.1",0.9638853,1.2455425,2.1241508,1.4445262,0.014452222,1622,0.014452222,0.0202193966591872,0.0357385095203452,"Yes"]
["Os12g0607000","Os12g0607000","LOC_Os12g41390.1",1.3743916,1.2721052,1.6944818,1.4469929,2.2446387E-3,313,0.002244639,0.00390177013213662,0.0287643675047923,"Yes"]
["GT_Os_A_Specific_0189529","Os01g0275600","LOC_Os01g16870.1",2.0337043,1.0428934,1.2648277,1.4471418,0.018965218,1970,0.018965218,0.0245574669658439,0.038613954009137,"Yes"]
["GT_Os_A_Specific_0029457","Os08g0254900","LOC_Os08g15500.1",1.2574215,1.0408301,2.044506,1.4475859,0.008804012,1115,0.008804012,0.0138992769882822,0.0316707552753363,"Yes"]
["GT_Os_A_Specific_0002030","Os01g0578000","LOC_Os01g39630.1",1.796205,1.4665599,1.0880694,1.4502782,0.011228722,1342,0.011228722,0.0167289952630266,0.0335606586751117,"Yes"]
["Os12g0175500","Os12g0175500","LOC_Os12g07650.1",1.4501677,0.73624897,2.16671,1.4510422,0.02590735,2460,0.02590735,0.0306656694091249,0.0422416182317073,"Yes"]
["Os11g0183800","Os11g0183800","LOC_Os11g08090.1",1.3305197,1.0904803,1.9355626,1.4521875,0.03376453,2951,0.03376453,0.0367863375716778,0.0458927583293798,"Yes"]
["Os01g0723400","Os01g0723400","LOC_Os01g52500.1",1.7928853,1.1503263,1.413527,1.4522462,0.0030080916,414,3.008092E-3,0.00516080777860882,0.0291436159710144,"Yes"]
["Os04g0602400","Os04g0602400","LOC_Os04g51330.1",1.54216,0.9536772,1.8656616,1.453833,0.017268462,1847,0.017268462,0.0230241834953876,0.0375007044298862,"Yes"]
["Os07g0525100","Os07g0525100","LOC_Os07g34110.1",1.1486664,1.2814565,1.9386091,1.456244,0.016123625,1751,0.016123625,0.0218274744452754,0.036934243218161,"Yes"]
["Os02g0212900","Os02g0212900","LOC_Os02g12130.1",1.307548,1.0032401,2.0629115,1.4578999,0.011506861,1367,0.011506861,0.0170406382448267,0.0337629988814923,"Yes"]
["Os_A_Specific_0007262","Os01g0680650","None",1.1674347,1.1675315,2.0416365,1.4588675,0.039293785,3241,0.039293785,0.0404013961605584,0.0486292414794816,"Yes"]
["Os01g0613900","Os01g0613900","LOC_Os01g42800.1",1.3962874,0.99259424,1.9908133,1.4598984,0.009719347,1199,0.009719347,0.0149463974071303,0.0325140123577981,"Yes"]
["GT_Os_A_Specific_0243254","Os04g0612500","LOC_Os04g52260.1",2.0224,1.1942348,1.1641054,1.4602467,0.019677673,2024,0.019677673,0.025230615806532,0.0389956256931818,"Yes"]
["Os03g0667500","Os03g0667500","LOC_Os03g46470.1",1.304184,1.3032708,1.7802334,1.4625627,0.010610151,1291,0.010610151,0.0160932435801545,0.0329646132153369,"Yes"]
["Os03g0638000","Os03g0638000","LOC_Os03g43684.1",0.6592865,1.8887305,1.8410225,1.4630132,0.025731696,2452,0.025731696,0.0305659436549488,0.0420921014094616,"Yes"]
["GT_Os_A_Specific_0030777","Os04g0355401","None",1.668333,1.1367097,1.5849891,1.463344,0.030702254,2754,0.030702254,0.0343305908750934,0.0447155921546841,"Yes"]
["Os05g0567300","Os05g0567300","LOC_Os05g49220.1",1.0169535,0.98104477,2.3953032,1.4644338,0.037314087,3144,0.037314087,0.0391922213911742,0.0476039449608778,"Yes"]
["Os12g0293000","Os12g0293000","None",2.0151997,0.8105054,1.5684237,1.4647096,0.02017265,2068,0.02017265,0.0257791074545001,0.0391259667069632,"Yes"]
["Os02g0526000","Os02g0526000","LOC_Os02g32504.1",1.4789109,0.8420205,2.0804706,1.467134,0.017261038,1846,0.017261038,0.0230117177761156,0.037504888092091,"Yes"]
["Os09g0442100","Os09g0442100","LOC_Os09g27010.1",1.6660757,0.9712534,1.764638,1.4673223,0.0062599992,825,0.006259999,0.0102842183994016,0.0304349769563636,"Yes"]
["Os01g0228600","Os01g0228600","LOC_Os01g12830.1",1.8481588,0.77893543,1.7777891,1.4682945,0.036598854,3106,0.036598854,0.0387185240588381,0.0472627184140373,"Yes"]
["Os06g0712700","Os06g0712700","LOC_Os06g49840.1",1.329948,1.4783235,1.5986204,1.468964,0.033172484,2915,0.033172484,0.0363375716778858,0.0456448827869639,"Yes"]
["Os01g0719200","Os01g0719200","LOC_Os01g52120.1",1.5458288,0.80375814,2.0585556,1.4693809,0.019286558,1991,0.019286558,0.0248192470705559,0.0388540352275238,"Yes"]
["GT_Os_A_Specific_0091021","Os02g0808100","LOC_Os02g56400.1",1.6428676,1.5647326,1.2025938,1.4700646,0.021696998,2180,0.021696998,0.0271752680129643,0.0399204857697247,"Yes"]
["Os05g0566800","Os05g0566800","LOC_Os05g49170.1",1.1166234,1.515552,1.7797542,1.4706432,2.6439948E-3,372,0.002643995,0.00463724756918474,0.0285082364112903,"Yes"]
["Os09g0555600","Os09g0555600","LOC_Os09g38330.1",1.5551486,1.1821628,1.6811471,1.4728194,0.007622626,980,0.007622626,0.0122164048865619,0.0311983192714285,"Yes"]
["GT_Os_A_Specific_0028109","Os06g0720100","None",2.020512,0.89046,1.5081539,1.473042,0.017062334,1829,0.017062334,0.0227998005484916,0.0374177264483324,"Yes"]
["Os07g0607200","Os07g0607200","LOC_Os07g41630.1",1.4812737,0.88263226,2.0555544,1.4731535,0.03138763,2809,0.03138763,0.0350162054350536,0.0448187198042007,"Yes"]
["Os02g0759900","Os02g0759900","LOC_Os02g52260.1",1.4908209,0.9865236,1.9427404,1.4733616,0.018038293,1893,0.018038293,0.0235976065818997,0.0382205986386687,"Yes"]
["GT_Os_A_Specific_0009533","Os05g0460800","LOC_Os05g38590.1",1.9954419,0.9617052,1.4799175,1.4790215,0.00956859,1132,0.009038164,0.0141111942159062,0.0320248019469964,"Yes"]
["Os05g0567100","Os05g0567100","LOC_Os05g49200.1",1.50739,1.3880062,1.5468693,1.4807552,0.016383123,2320,0.023729159,0.0289204687110446,0.0410248520469827,"Yes"]
["Os10g0564500","Os10g0564500","LOC_Os10g41490.1",1.6117702,1.0300999,1.8008947,1.4809216,0.016760604,1806,0.016760604,0.0225130890052356,0.0372241321395348,"Yes"]
["Os11g0170200","Os11g0170200","LOC_Os11g06910.1",0.9940305,1.4922566,1.9585738,1.4816203,0.010475235,1276,0.010475235,0.0159062577910745,0.0329280310227272,"Yes"]
["Os06g0614400","Os06g0614400","LOC_Os06g41120.1",1.3563919,1.1334314,1.9569111,1.4822448,0.01704818,1828,0.01704818,0.0227873348292196,0.0374071389387308,"Yes"]
["Os02g0278700","Os02g0278700","LOC_Os02g17780.1",1.5791254,1.8714838,0.9979534,1.4828542,0.01485694,1650,0.01485694,0.0205684367988032,0.0361158705090909,"Yes"]
["Os08g0536100","Os08g0536100","LOC_Os08g42420.1",0.8871112,1.8068194,1.7560835,1.483338,0.008505321,1077,0.008505321,0.0134255796559461,0.0316758055069637,"Yes"]
["GT_Os_A_Specific_0124917","Os03g0197125","None",1.9746475,0.7978382,1.6790395,1.4838418,0.03162602,2822,0.03162602,0.0351782597855896,0.0449510865414599,"Yes"]
["GT_Os_A_Specific_0022001","Os09g0474051","LOC_Os09g29825.1",1.6614666,1.0835342,1.7155805,1.4868604,0.033893224,2959,0.033893224,0.0368860633258539,0.0459431299303818,"Yes"]
["Os03g0247600","Os03g0247600","LOC_Os03g14334.1",1.3524499,0.90996504,2.2040353,1.4888167,0.02756984,2567,0.02756984,0.0319995013712291,0.0430785462563303,"Yes"]
["Os03g0239300","Os03g0239300","LOC_Os03g13600.1",1.1153097,1.5938396,1.7634478,1.4908657,1.7796258E-3,260,0.001779626,0.00324108701072051,0.0274541534076923,"Yes"]
["Os08g0161800","Os08g0161800","LOC_Os08g06450.1",0.6165252,1.7921038,2.0644264,1.4910184,0.03379449,2952,0.03379449,0.0367988032909498,0.0459179198475609,"Yes"]
["Os07g0549600","Os07g0549600","LOC_Os07g36460.1",1.4299517,0.79918957,2.2452888,1.4914767,0.03689108,3122,0.03689108,0.0389179755671902,0.047395939103139,"Yes"]
["Os01g0851000","Os01g0851000","LOC_Os01g63220.1",1.3006458,1.0677128,2.1074448,1.4919344,0.021519285,2163,0.021519285,0.0269633507853403,0.0399046935436893,"Yes"]
["Os04g0499100","Os04g0499100","LOC_Os04g42130.1",1.7312169,1.063771,1.6857247,1.4935709,0.0039344705,547,0.003934471,0.00681874844178509,0.0288503897276051,"Yes"]
["Os01g0174000","Os01g0174000","LOC_Os01g07880.1",1.6572042,1.2200198,1.6057577,1.4943272,0.0030516945,421,0.003051695,0.00524806781351284,0.0290744623396674,"Yes"]
["Os12g0152800","Os12g0152800","LOC_Os12g05660.1",1.082787,1.5586553,1.8444848,1.495309,0.008527353,1079,0.008527353,0.0134505110944901,0.0316989924772937,"Yes"]
["GT_Os_A_Specific_0028768","Os08g0300200","LOC_Os08g20544.1",1.8077898,0.9489298,1.7313452,1.4960216,0.01726252,1469,0.012758411,0.0183121416105709,0.034835933642614,"Yes"]
["Os04g0349600","Os04g0349600","None",1.1726489,1.641933,1.6738353,1.496139,0.03165517,2825,0.03165517,0.0352156569434056,0.0449447387150442,"Yes"]
["GT_Os_A_Specific_0087448","Os06g0295900","LOC_Os06g19200.1",1.4816575,1.3345909,1.6742368,1.4968284,0.015762603,1721,0.015762603,0.0214535028671154,0.0367366650976176,"Yes"]
["Os09g0466100","Os09g0466100","LOC_Os09g29100.1",1.4066858,1.9499846,1.1386518,1.4984407,0.040346727,3308,0.040346727,0.0412365993517826,0.0489210163231559,"Yes"]
["Os01g0500400","Os01g0500400","None",1.7703314,1.3080988,1.418334,1.4989214,0.0025216884,349,0.002521688,0.00435053602592869,0.0289813483323782,"Yes"]
["Os07g0674100","Os07g0674100","LOC_Os07g47700.1",1.2602601,0.90765476,2.329053,1.4989892,0.023881633,2337,0.023881633,0.0291323859386686,0.040988117228498,"Yes"]
["GT_Os_A_Specific_0001081","Os11g0638000","LOC_Os11g41910.1",0.9683142,1.232336,2.3004303,1.5003601,0.028208122,2944,0.03367052,0.0366990775367738,0.0458737961005434,"Yes"]
["Os08g0534000","Os01g0972200","LOC_Os01g74110.1",1.6347933,0.85281086,2.0147924,1.5007988,0.02504174,2381,0.02458689,0.0296808775866367,0.0414187382570348,"Yes"]
["GT_Os_A_Specific_0074020","Os04g0247500","LOC_Os04g17479.1",1.3006692,1.4441781,1.7638974,1.5029149,1.3743753E-3,1675,0.015261733,0.0208800797806033,0.0365461558585074,"Yes"]
["Os04g0643200","Os04g0643200","LOC_Os04g55050.1",1.1367679,0.8630314,2.5119147,1.5039047,0.036296032,3079,0.036296032,0.0383819496384941,0.0472826841026307,"Yes"]
["Os04g0613700","Os04g0613700","LOC_Os04g52370.1",1.0612154,1.4742737,1.9792662,1.5049185,0.0288859,2639,0.0288859,0.0328970331588132,0.0439035031830238,"Yes"]
["Os09g0460300","Os09g0460300","LOC_Os09g28620.1",1.2630363,1.9348931,1.317563,1.5051641,0.0045576473,629,0.004557647,0.00784093742208925,0.0290631512193958,"Yes"]
["Os01g0805200","Os01g0805200","LOC_Os01g59080.1",1.8840466,1.0283699,1.6043711,1.5055958,0.021623269,2172,0.021623269,0.0270755422587883,0.0399313683052486,"Yes"]
["Os03g0640000","Os03g0640000","LOC_Os03g43880.1",1.2028141,1.4472365,1.8668475,1.5056328,0.033395603,2931,0.033395603,0.0365370231862378,0.0457010452517912,"Yes"]
["Os08g0529400","Os08g0529400","LOC_Os08g41760.1",1.3635683,1.9365053,1.2169871,1.5056869,0.0035308106,492,3.530811E-3,6.13313388182498E-3,0.0287847213841463,"Yes"]
["Os05g0376400","Os05g0376400","None",1.5785799,1.3648567,1.5798588,1.5077652,0.039740693,3277,0.039740693,0.0408501620543505,0.0486420261284711,"Yes"]
["Os06g0254700","Os06g0254700","LOC_Os06g14370.1",1.1733723,1.3146086,2.0387173,1.5088993,0.0073983776,959,0.007398378,0.0119546247818499,0.0309435809781021,"Yes"]
["GT_Os_A_Specific_0272336","Os06g0114200","LOC_Os06g02390.1",1.376534,1.3649244,1.7873378,1.5095987,0.026840448,2516,0.026840448,0.031363749688357,0.0427889653926868,"Yes"]
["Os03g0174200","Os03g0174200","LOC_Os03g07810.1",1.2997556,1.9871631,1.2473211,1.5114132,0.007923277,1013,0.007923277,0.012627773622538,0.0313724225538005,"Yes"]
["GT_Os_A_Specific_0059722","Os02g0629101","None",1.224113,1.8150616,1.4964027,1.511859,0.027130686,2536,0.027130686,0.031613064073797,0.0429105605465299,"Yes"]
["Os04g0505000","Os04g0505000","LOC_Os04g42610.1",1.1039858,1.0988626,2.3345428,1.5124637,0.025433606,2428,0.025433606,0.0302667663924208,0.0420157305049423,"Yes"]
["Os01g0712600","Os01g0712600","LOC_Os01g51530.1",1.6640697,0.80834436,2.0672488,1.5132209,0.01717844,1842,0.01717844,0.0229618548990276,0.0374064727687296,"Yes"]
["Os12g0137200","Os12g0137200","LOC_Os12g04260.1",1.2389569,1.1470122,2.1544104,1.5134598,0.013572943,1544,0.013572943,0.019247070555971,0.0352597631949481,"Yes"]
["GT_Os_A_Specific_0000627","Os03g0211700","LOC_Os03g11320.1",0.8342209,1.644567,2.0644355,1.5144078,0.013960826,1577,0.013960826,0.0196584392919471,0.0355084800798985,"Yes"]
["Os03g0338400","Os03g0338400","LOC_Os03g21970.1",1.197546,1.7249599,1.6221018,1.5148692,0.0036564677,508,3.656468E-3,0.00633258539017701,0.0288702621023622,"Yes"]
["Os_A_Specific_0008047","Os01g0810100","LOC_Os01g59510.1",0.5598397,1.7378454,2.2486258,1.515437,0.040760946,3328,0.040760946,0.0414859137372226,0.0491262483191105,"Yes"]
["GT_Os_A_Specific_0130757","Os02g0198333","None",1.8617058,0.92342186,1.7670965,1.517408,0.018564167,1943,0.018564167,0.0242208925454998,0.0383226319284611,"Yes"]
["Os03g0786100","Os03g0786100","LOC_Os03g57220.1",2.1073618,1.051321,1.4013481,1.5200104,0.041184973,3346,0.041184973,0.0417102966841186,0.0493702709811715,"Yes"]
["Os07g0630800","Os07g0630800","LOC_Os07g43700.1",1.3731122,1.2732186,1.9137554,1.5200287,0.025636597,2443,0.025636597,0.0304537521815008,0.0420910317507163,"Yes"]
["Os02g0318500","Os02g0318500","LOC_Os02g21340.1",2.260859,0.74138165,1.5598545,1.5206984,0.03333028,2924,0.03333028,0.0364497631513338,0.0457208457865937,"Yes"]
["Os02g0781000","Os02g0781000","LOC_Os02g54030.1",0.96280766,1.2073755,2.3929715,1.5210515,0.023925083,2343,0.023925083,0.0292071802543006,0.0409575364545454,"Yes"]
["Os06g0155900","Os06g0155900","LOC_Os06g06210.2",1.006506,1.8219881,1.7405949,1.5230297,0.0062358337,822,6.235834E-3,0.0102468212415856,0.0304281388978102,"Yes"]
["Os07g0102200","Os07g0102200","LOC_Os07g01230.1",1.5804338,1.3040595,1.6871233,1.5238723,0.02386372,2335,0.02386372,0.0291074545001246,0.0409924543554603,"Yes"]
["Os07g0485400","Os07g0485400","LOC_Os07g30200.1",1.2632117,0.84246063,2.466681,1.5241178,0.040187653,3300,0.040187653,0.0411368735976065,0.04884626551,"Yes"]
["GT_Os_A_Specific_0395611","Os02g0128800","LOC_Os02g03620.1",1.7858605,1.130147,1.6582794,1.5247623,0.0024636872,655,0.004780189,0.0081650461231613,0.0292722718763358,"Yes"]
["GT_Os_A_Specific_0011596","Os03g0720300","LOC_Os03g51080.1",1.7300868,1.2964635,1.5505676,1.5257059,0.005399494,732,0.005399494,0.00912490650710546,0.0295865716311475,"Yes"]
["Os12g0236900","Os12g0236900","LOC_Os12g13460.1",1.1839533,1.1253357,2.2682924,1.5258604,0.01640182,1777,0.01640182,0.0221515831463475,0.0370217782892515,"Yes"]
["Os03g0826500","Os03g0826500","LOC_Os03g61120.1",0.8393984,1.8086166,1.9329677,1.5269942,0.012666754,1460,0.012666754,0.0181999501371229,0.0347988700643835,"Yes"]
["Os09g0290900","Os09g0290900","LOC_Os09g11890.1",1.7273126,0.8624191,1.9950776,1.5282698,0.011710732,1387,0.011710732,0.0172899526302667,0.0338657145291997,"Yes"]
["Os12g0609500","Os12g0609500","LOC_Os12g41590.1",1.4945259,1.3642402,1.7278218,1.5288626,0.0393585,3247,0.0393585,0.0404761904761904,0.0486193235294117,"Yes"]
["GT_Os_A_Specific_0204911","Os08g0278750","LOC_Os08g17655.1",1.2401743,1.4041076,1.9480247,1.5307689,0.011236353,1344,0.011236353,0.0167539267015706,0.033533490984375,"Yes"]
["Os_A_Specific_0053427","Os01g0151200","LOC_Os01g05800.1",1.7719846,1.0963573,1.7293353,1.532559,0.037894953,3166,0.037894953,0.0394664672151583,0.0480090513212255,"Yes"]
["Os06g0572400","Os06g0572400","LOC_Os06g37510.1",1.5173378,1.1807384,1.90026,1.5327787,0.01148345,1365,0.01148345,0.0170157068062827,0.0337436761538461,"Yes"]
["Os06g0107100","Os06g0107100","LOC_Os06g01790.1",1.1849432,1.2680426,2.1467824,1.533256,0.041489914,3359,0.041489914,0.0418723510346547,0.0495433298761536,"Yes"]
["GT_Os_A_Specific_0013505","Os06g0286310","LOC_Os06g17830.1",1.4166903,1.3627033,1.8222156,1.5338697,0.008196436,1043,0.008196436,0.013001745200698,0.0315205223355704,"Yes"]
["Os03g0232600","Os03g0232600","LOC_Os03g13010.1",1.4851441,0.71531105,2.4017239,1.5340596,0.030908547,2773,0.030908547,0.0345674395412615,0.0447076026025964,"Yes"]
["Os03g0712800","Os03g0712800","LOC_Os03g50490.1",0.4553666,2.4082847,1.7395811,1.5344108,0.054886285,640,0.004647809,7.97806033408127E-3,0.0291286904671875,"Yes"]
["Os08g0440100","Os08g0440100","LOC_Os08g34150.1",1.8065786,0.8187351,1.9795446,1.5349528,0.021357015,2150,0.021357015,0.0268012964348042,0.039843249844186,"Yes"]
["Os06g0196900","Os06g0196900","LOC_Os06g09679.1",1.4266396,1.000248,2.180973,1.5359535,0.02218964,2217,0.02218964,0.0276364996260284,0.0401455327198917,"Yes"]
["Os10g0493600","Os10g0493600","LOC_Os10g35110.1",1.8335791,1.7053304,1.0697389,1.5362161,0.016566437,1787,0.016566437,0.0222762403390675,0.0371840955831001,"Yes"]
["Os01g0350000","Os01g0350000","LOC_Os01g24790.1",1.1589456,1.5756907,1.8869829,1.5405397,0.012543131,1444,0.012543131,0.0180004986287708,0.0348410654023545,"Yes"]
["Os04g0631200","Os04g0631200","LOC_Os04g53950.1",1.0859652,1.119205,2.416719,1.5406297,0.032850027,2901,0.032850027,0.0361630516080777,0.0454193237838676,"Yes"]
["GT_Os_A_Specific_0232839","Os03g0348800","LOC_Os03g22670.1",1.6089802,1.2470713,1.7674079,1.5411531,1.7495052E-3,857,0.006566697,0.0106831214161057,0.0307339809416569,"Yes"]
["Os05g0299200","Os05g0299200","LOC_Os05g23420.1",1.5565944,1.0636129,2.0039783,1.5413952,0.00490631,674,0.00490631,0.00840189478932934,0.0291976400741839,"Yes"]
["Os12g0168700","Os12g0168700","LOC_Os12g07110.1",2.2805815,0.6411867,1.7038698,1.5418793,0.03525769,3027,0.03525769,0.03773373223635,0.0467190599900892,"Yes"]
["Os09g0266000","Os09g0266000","LOC_Os09g09320.1",1.8653412,0.9587326,1.8037672,1.5426136,0.010351542,1258,0.010351542,0.0156818748441785,0.0330047972670906,"Yes"]
["Os07g0691300","Os07g0691300","LOC_Os07g49114.1",1.4038544,1.6380796,1.5871897,1.5430412,0.038589917,3203,0.038589917,0.0399276988282223,0.048324744641586,"Yes"]
["Os06g0188400","Os06g0188400","LOC_Os06g08880.1",1.7234845,1.1980939,1.7183247,1.5466343,0.0020526268,289,2.052627E-3,3.60259286960857E-3,0.0284881899550173,"Yes"]
["Os07g0450100","Os07g0450100","None",1.2489891,1.5375066,1.8545218,1.5470058,0.013233857,1513,0.013233857,0.018860633258539,0.035083278537343,"Yes"]
["Os02g0750400","Os02g0750400","LOC_Os02g51480.1",1.298595,1.2775588,2.0660233,1.5473924,0.014259092,1602,0.014259092,0.0199700822737471,0.0357011348389513,"Yes"]
["Os03g0110900","Os03g0110900","LOC_Os03g02020.1",1.924757,0.9776778,1.7407556,1.5477301,0.0058850814,790,0.005885081,0.00984791822488157,0.0298798226468354,"Yes"]
["Os07g0133500","Os07g0133500","LOC_Os07g04150.1",0.8239527,2.496076,1.3248682,1.548299,0.038395114,3193,0.038395114,0.0398030416355023,0.0482313818521766,"Yes"]
["Os03g0345300","Os03g0345300","LOC_Os03g22470.1",1.6408367,1.0031853,2.0051155,1.5497125,0.0062088748,819,6.208875E-3,0.0102094240837696,0.0304075673076923,"Yes"]
["Os01g0963400","Os01g0963400","LOC_Os01g73234.1",1.7509727,0.84708405,2.0529957,1.5503508,0.013068956,1498,0.013068956,0.0186736474694589,0.0349930457383177,"Yes"]
["Os02g0130600","Os02g0130600","LOC_Os02g03790.1",0.9827032,1.5873728,2.081296,1.5504574,0.007602254,977,0.007602254,0.0121790077287459,0.031210481877175,"Yes"]
["Os03g0237600","Os03g0237600","LOC_Os03g13460.1",0.8547759,1.5734558,2.226132,1.5514545,0.02768826,2574,0.02768826,0.0320867614061331,0.0431459249650349,"Yes"]
["Os08g0115200","Os08g0115200","LOC_Os08g02250.1",1.988791,0.89503574,1.7733319,1.5523863,0.01301559,1491,0.01301559,0.0185863874345549,0.0350137702816901,"Yes"]
["Os08g0293100","Os08g0293100","LOC_Os08g19670.1",1.7699785,1.0127993,1.8782129,1.5536636,0.024638321,2384,0.024638321,0.0297182747444527,0.0414531482932047,"Yes"]
["Os06g0712500","Os06g0712500","LOC_Os06g49810.1",1.4750214,1.4430709,1.7439504,1.5540142,0.0062249284,820,0.006224928,0.0102218898030416,0.0304490075707317,"Yes"]
["Os12g0171500","Os12g0171500","None",1.7557821,1.1877184,1.7232809,1.5555938,0.0026223646,368,0.002622365,0.00458738469209673,0.0285823533016304,"Yes"]
["Os03g0124900","Os03g0124900","LOC_Os03g03350.1",1.654316,1.290657,1.728343,1.557772,0.023417842,2303,0.023417842,0.0287085514834205,0.0407854816595744,"Yes"]
["Os02g0699700","Os02g0699700","LOC_Os02g47150.1",0.81768036,2.0797567,1.7766681,1.558035,0.029641211,2684,0.029641211,0.0334579905260533,0.0442961614459761,"Yes"]
["Os03g0786400","Os03g0786400","LOC_Os03g57240.1",0.7020664,1.8917861,2.0888433,1.5608987,0.02838696,2603,0.02838696,0.0324482672650211,0.0437418734383403,"Yes"]
["GT_Os_A_Specific_0168673","Os08g0428400","LOC_Os08g33160.1",1.526289,1.531292,1.6314845,1.5630218,0.0010717441,158,0.001071744,0.00196958364497631,0.0272073745822784,"Yes"]
["GT_Os_A_Specific_0220355","Os03g0787600","LOC_Os03g57349.1",1.696403,1.3947892,1.5990152,1.5634025,0.0012808208,484,0.003488591,0.00603340812764896,0.0289106167376033,"Yes"]
["Os02g0670700","Os02g0670700","LOC_Os02g44970.1",1.7563167,1.279479,1.6618824,1.5658927,0.024587166,2383,0.024587166,0.0297058090251807,0.0413844409676877,"Yes"]
["GT_Os_A_Specific_0022406","Os11g0171400","LOC_Os11g07030.1",1.4104414,1.242435,2.0456724,1.566183,0.0064268103,1692,0.015400094,0.0210919970082273,0.0365069604219858,"Yes"]
["Os02g0762600","Os02g0762600","LOC_Os02g52490.1",0.8613558,1.8018622,2.0376697,1.5669626,0.021679426,2179,0.021679426,0.0271628022936923,0.0399064606177145,"Yes"]
["Os09g0422500","Os09g0422500","LOC_Os09g25490.1",0.6265292,1.9677615,2.1067362,1.567009,0.03590572,3062,0.03590572,0.0381700324108701,0.0470339134291312,"Yes"]
["GT_Os_A_Specific_0312106","Os08g0123400","None",0.95219135,2.0973701,1.6522465,1.5672693,0.033084504,2910,0.033084504,0.0362752430815258,0.045602043142268,"Yes"]
["GT_Os_A_Specific_0134114","Os06g0692300","LOC_Os06g47720.1",0.71793365,2.0286412,1.9556189,1.567398,0.021671746,2178,0.021671746,0.0271503365744203,0.0399106396721763,"Yes"]
["Os01g0361500","Os01g0361500","LOC_Os01g25990.2",1.0970016,1.7082763,1.9015851,1.5689543,0.01627048,1763,0.01627048,0.0219770630765395,0.0370169570504821,"Yes"]
["Os08g0522500","Os08g0522500","LOC_Os08g41100.1",1.3881807,1.4211655,1.8980799,1.569142,0.0153373135,1683,0.015337314,0.0209798055347793,0.0365525647379679,"Yes"]
["Os11g0605500","Os11g0605500","LOC_Os11g39220.1",2.0384588,1.3451777,1.3271456,1.5702606,0.005560985,753,0.005560985,0.0093866866118175,0.0296216611354581,"Yes"]
["GT_Os_A_Specific_0053636","Os12g0210800","LOC_Os12g10784.1",1.6806793,0.85279083,2.1847172,1.5727291,0.020745685,2243,0.0225146,0.0279606083271004,0.0402612842621489,"Yes"]
["Os_A_Specific_0060980","Os08g0560401","None",1.9884057,0.75600624,1.9753766,1.5732628,0.03720622,3140,0.03720622,0.0391423585140862,0.0475267988598726,"Yes"]
["Os04g0514400","Os04g0514400","LOC_Os04g43420.1",1.9827418,0.921535,1.8158469,1.5733746,0.026840618,2517,0.026840618,0.031376215407629,0.0427722363122765,"Yes"]
["Os04g0619900","Os04g0619900","LOC_Os04g52890.1",1.5917635,1.5201359,1.6084185,1.5734392,0.026835898,2514,0.026835898,0.031338818249813,0.0428157465704057,"Yes"]
["Os01g0901000","Os01g0901000","LOC_Os01g67500.1",0.9424033,2.4943814,1.2844157,1.5737334,0.04093278,3336,0.04093278,0.0415856394913986,0.0492150421402877,"Yes"]
["Os04g0461400","Os04g0461400","None",1.845542,1.2088661,1.6751928,1.5765337,0.014669924,1639,0.014669924,0.0204313138868112,0.0359005888737034,"Yes"]
["Os05g0521300","Os05g0521300","LOC_Os05g44560.1",1.3492355,1.7993574,1.5822845,1.5769591,0.031677887,2831,0.031677887,0.0352904512590376,0.0448816689357117,"Yes"]
["Os06g0683900","Os06g0683900","LOC_Os06g46990.1",0.59614754,1.9436793,2.1926136,1.5774802,0.032436103,2879,0.032436103,0.0358888057840937,0.0451897218245918,"Yes"]
["Os03g0689900","Os03g0689900","LOC_Os03g48380.1",1.6626263,1.0678692,2.0026941,1.5777298,0.010545292,1285,0.010545292,0.0160184492645225,0.0329160826552529,"Yes"]
["Os12g0197500","Os12g0197500","LOC_Os12g09580.1",1.5258427,1.4328332,1.7778668,1.5788475,0.00035784842,56,0.000357848,0.000698080279232111,0.025630863,"Yes"]
["GT_Os_A_Specific_0148399","Os06g0114500","LOC_Os06g02420.1",1.4486012,1.2002411,2.0884986,1.5791136,0.005227976,2253,0.022652734,0.0280852655198204,0.0403285024740346,"Yes"]
["Os07g0237900","Os07g0237900","LOC_Os07g13370.1",1.661705,1.5291305,1.5487585,1.5798646,0.001774721,258,0.001774721,0.00321615557217651,0.0275907206627906,"Yes"]
["GT_Os_A_Specific_0218799","Os08g0207401","None",1.1857538,1.8074036,1.7587609,1.5839728,0.011342337,1354,0.011342337,0.0168785838942907,0.033599788557607,"Yes"]
["GT_Os_A_Specific_0020528","Os02g0749800","LOC_Os02g51450.1",1.5262136,1.4490204,1.7768898,1.5840412,1.1191572E-3,251,0.001750392,3.1288955372725E-3,0.0279714036334661,"Yes"]
["Os03g0273800","Os03g0273800","LOC_Os03g16670.1",0.8760929,1.8196807,2.061788,1.5858539,0.040961567,3338,0.040961567,0.0416105709299426,0.0492201453675853,"Yes"]
["GT_Os_A_Specific_0351120","Os03g0822100","LOC_Os03g60730.1",0.854897,1.516046,2.386765,1.5859027,0.029830191,2701,0.029830191,0.0336699077536773,0.044297999296927,"Yes"]
["Os06g0146100","Os06g0146100","LOC_Os06g05359.1",0.5333142,1.867876,2.356666,1.5859522,0.03817836,3180,0.03817836,0.0396409872849663,0.0481551578490566,"Yes"]
["Os06g0600700","Os06g0600700","LOC_Os06g39900.1",1.6105986,0.89878654,2.249186,1.5861903,0.025929933,2461,0.025929933,0.0306781351283969,0.0422612601637545,"Yes"]
["Os01g0687800","Os01g0687800","LOC_Os01g49360.1",2.003201,0.9807272,1.7758708,1.5865997,0.022384873,2232,0.022384873,0.0278234854151084,0.0402265795712365,"Yes"]
["Os08g0425200","Os08g0425200","LOC_Os08g32930.1",0.90290403,1.6411681,2.2159176,1.5866632,0.026109554,2470,0.026109554,0.0307903266018449,0.042398955908502,"Yes"]
["Os03g0293100","Os03g0293100","LOC_Os03g18200.1",1.8872213,0.8650799,2.0082588,1.5868534,0.038734727,3210,0.038734727,0.0400149588631264,0.0484003084102803,"Yes"]
["Os07g0551500","Os07g0551600","LOC_Os07g36610.1",1.3500547,1.1279988,2.2848015,1.5876184,0.015449509,1694,0.015449509,0.0211169284467713,0.0365808622190082,"Yes"]
["Os04g0592400","Os04g0592400","LOC_Os04g50204.1",1.836812,1.0784922,1.8479576,1.5877539,0.008699173,1101,0.008699173,0.0137247569184741,0.0316915376049046,"Yes"]
["Os02g0762100","Os02g0762100","LOC_Os02g52450.1",1.1753631,1.764472,1.8236818,1.587839,0.0015987282,226,1.598728E-3,0.00281725255547245,0.0283738849911504,"Yes"]
["GT_Os_A_Specific_0171721","Os06g0531200","LOC_Os06g34040.1",1.5915527,1.1078682,2.069398,1.5896063,0.013977651,2189,0.021812137,0.0272874594864123,0.0399673282352672,"Yes"]
["Os05g0586600","Os05g0586600","LOC_Os05g50930.1",2.2094264,1.0108061,1.5574036,1.5925454,0.031052561,2786,0.031052561,0.0347294938917975,0.0447063252587939,"Yes"]
["Os07g0568000","Os07g0568000","LOC_Os07g38060.1",1.1295714,1.4799709,2.1806355,1.596726,0.03995719,3290,0.03995719,0.0410122164048865,0.048713765680851,"Yes"]
["Os08g0245200","Os08g0245200","LOC_Os08g14760.1",1.766758,1.2921066,1.7343984,1.5977544,0.0059596878,798,0.005959688,0.00994764397905759,0.0299552738947368,"Yes"]
["Os01g0247600","Os01g0247600","LOC_Os01g14514.1",1.6692343,1.1264868,1.998622,1.5981144,0.018946609,1969,0.018946609,0.0245450012465719,0.0385956570335195,"Yes"]
["Os08g0542600","Os08g0542600","LOC_Os08g42950.1",1.4346485,1.2796798,2.0872512,1.6005265,0.004299457,592,0.004299457,0.00737970580902518,0.0291302736942567,"Yes"]
["Os01g0773000","Os01g0773000","LOC_Os01g56620.1",0.82249737,1.9220853,2.0651631,1.6032486,0.026827902,2513,0.026827902,0.031326352530541,0.0428200218551532,"Yes"]
["Os02g0794400","Os02g0794400","LOC_Os02g55120.1",1.5054917,1.1199708,2.1850743,1.6035123,0.037828624,3160,0.037828624,0.0393916728995263,0.0480160160962025,"Yes"]
["Os03g0767600","Os03g0767600","LOC_Os03g55830.1",1.7476416,0.77074957,2.2921782,1.6035231,0.024965465,2401,0.024965465,0.0299301919720767,0.0417061558163265,"Yes"]
["Os11g0209600","Os11g0209600","LOC_Os11g10400.1",1.5477409,1.6400619,1.6273756,1.6050595,1.1200833e-06,2,1.12008E-6,2.49314385440039e-05,2.24632044E-3,"Yes"]
["GT_Os_A_Specific_0000335","Os03g0211850","LOC_Os03g11335.1",1.5079508,1.5592413,1.7644777,1.6105566,1.1508393E-3,170,0.001150839,2.11917227624033E-3,0.0271530307588235,"Yes"]
["Os09g0487600","Os09g0487600","LOC_Os09g31270.1",0.8466139,1.9035316,2.082693,1.6109462,0.01875997,1960,0.01875997,0.0244328097731239,0.0383909386071428,"Yes"]
["Os01g0228400","Os01g0228400","LOC_Os01g12810.1",1.5275631,1.0353603,2.276332,1.6130852,0.03764905,3152,0.03764905,0.0392919471453502,0.0479093716846446,"Yes"]
["Os09g0327400","Os09g0327400","LOC_Os09g15820.1",2.3406258,0.57231045,1.9290419,1.6139927,0.038650427,3204,0.038650427,0.0399401645474943,0.048385412826779,"Yes"]
["Os06g0683300","Os06g0683300","LOC_Os06g46940.1",1.6407819,1.7922177,1.4117951,1.6149316,0.008044234,1028,0.008044234,0.012814759411618,0.0313865978346303,"Yes"]
["Os03g0856900","Os03g0857000","LOC_Os03g63999.1",1.8374534,1.2121558,1.7981877,1.6159323,4.790997E-3,658,4.790997E-3,0.00820244328097731,0.0292046944787234,"Yes"]
["Os08g0541400","Os08g0541400","LOC_Os08g42850.1",1.6721125,0.99619675,2.1807976,1.6163689,0.038779527,3216,0.038779527,0.0400897531787584,0.048365883954291,"Yes"]
["Os04g0636300","Os04g0636300","LOC_Os04g54380.1",1.1854019,1.0806732,2.5876145,1.6178966,0.029349368,2665,0.029349368,0.0332211418598853,0.0441727260968105,"Yes"]
["Os10g0330000","Os10g0330000","LOC_Os10g18340.1",1.4076614,1.3750505,2.071581,1.6180977,0.0057806964,777,0.005780696,0.00968586387434555,0.0298408901621621,"Yes"]
["Os05g0211100","Os05g0211100","LOC_Os05g12040.1",1.4844131,1.2183533,2.1538563,1.6188742,0.026687669,2502,0.026687669,0.0311892296185489,0.0427834693681055,"Yes"]
["GT_Os_A_Specific_0043066","Os03g0841800","LOC_Os03g62500.1",1.9912853,1.2867913,1.585747,1.6212746,0.0039012216,540,0.003901222,0.00673148840688107,0.0289774100777777,"Yes"]
["Os01g0210500","Os01g0210500","LOC_Os01g11230.1",1.4432592,1.4269924,1.9965029,1.6222515,0.0010441924,156,1.044192E-3,0.00194465220643231,0.0268477827692307,"Yes"]
["Os03g0235700","Os03g0235700","LOC_Os03g13250.1",1.4591346,1.6222262,1.7965679,1.6259762,0.033718295,2947,0.033718295,0.0367364746945898,0.0458921212232779,"Yes"]
["GT_Os_A_Specific_0039826","Os08g0214300","None",2.1566381,1.1650014,1.5591412,1.6269269,0.015390809,1691,0.015390809,0.0210795312889553,0.0365065256646954,"Yes"]
["Os01g0235100","Os01g0235100","LOC_Os01g13390.1",1.7520738,1.1823249,1.9557424,1.630047,0.008396543,1060,0.008396543,0.0132136624283221,0.0317722018613207,"Yes"]
["Os05g0142400","Os05g0142400","LOC_Os05g05060.1",1.803113,1.9818182,1.1079702,1.6309671,0.02853877,2614,0.02853877,0.0325853901770132,0.0437907446327467,"Yes"]
["Os01g0658700","Os01g0658700","LOC_Os01g46950.1",0.81585455,2.3621979,1.7184267,1.6321597,0.024538197,2378,0.024538197,0.0296434804288207,0.0413888596160639,"Yes"]
["Os03g0839600","Os03g0839600","None",1.504169,1.2638016,2.1295872,1.6325192,0.032870907,2902,0.032870907,0.0361755173273497,0.0454325320389386,"Yes"]
["Os05g0137600","Os05g0137600","LOC_Os05g04650.1",2.241661,0.6250181,2.0310912,1.6325902,0.029995598,2718,0.029995598,0.0338818249813014,0.0442650270706401,"Yes"]
["Os10g0554200","Os10g0554200","LOC_Os10g40600.1",1.5774794,1.0493355,2.2865753,1.6377968,0.032766957,2896,0.032766957,0.0361007230117177,0.045382688027279,"Yes"]
["GT_Os_A_Specific_0277660","Os05g0103300","LOC_Os05g01280.1",1.3221045,1.9451437,1.6581125,1.6417869,0.013541626,2355,0.024206491,0.0293567688855647,0.0412281254356687,"Yes"]
["Os01g0266600","Os01g0266600","LOC_Os01g16152.1",1.210453,1.4651508,2.2603788,1.6453276,0.006765309,883,0.006765309,0.0110072301171777,0.030731205434881,"Yes"]
["Os01g0622300","Os01g0622300","LOC_Os01g43390.1",1.824635,0.99803495,2.1140356,1.6455685,0.012030185,1411,0.012030185,0.0175891298927948,0.0341977831573352,"Yes"]
["Os11g0649900","Os11g0649900","LOC_Os11g42989.1",1.5526009,1.480586,1.9113293,1.648172,0.006556041,856,0.006556041,0.0106706556968337,0.0307199537978971,"Yes"]
["Os10g0374700","Os10g0374700","LOC_Os10g22869.1",1.8831568,1.3469458,1.7150245,1.6483756,0.0043899757,605,0.004389976,7.5417601595612E-3,0.0291044524561983,"Yes"]
["Os08g0562100","Os08g0562100","LOC_Os08g44810.1",2.0994902,1.0513,1.7980137,1.6496013,0.0095400885,1189,0.009540089,0.0148217402144103,0.032182756079899,"Yes"]
["Os05g0196200","Os05g0196200","LOC_Os05g10740.1",1.1338205,2.2203903,1.594739,1.64965,0.007546349,969,0.007546349,0.0120792819745699,0.0312367449318885,"Yes"]
["Os01g0826900","Os01g0826900","LOC_Os01g61120.1",2.065364,0.8912444,1.9940166,1.6502084,0.0154704815,1697,0.015470482,0.0211543256045873,0.0365657650571596,"Yes"]
["Os10g0437700","Os10g0437700","LOC_Os10g30162.1",2.134789,1.2537651,1.5642467,1.6509336,0.012229801,1428,0.012229801,0.0178010471204188,0.0343513528088235,"Yes"]
["Os06g0681600","Os06g0681600","LOC_Os06g46799.1",1.541985,1.1789479,2.2438436,1.6549255,0.032331202,2877,0.032331202,0.0358638743455497,0.045074887459854,"Yes"]
["Os02g0573200","Os02g0573200","LOC_Os02g36380.1",1.5644331,1.3846655,2.0195923,1.6562303,1.9359923E-3,273,0.001935992,3.40314136125654E-3,0.0284441901538461,"Yes"]
["Os01g0805500","Os01g0805500","LOC_Os01g59110.1",2.0558662,0.79358816,2.1197805,1.6564116,0.039405163,3250,0.039405163,0.0405135876340064,0.0486320334747692,"Yes"]
["Os03g0185800","Os03g0185800","None",1.6114187,1.1704164,2.1880655,1.6566335,0.039144967,3234,0.039144967,0.0403141361256544,0.0485499266038961,"Yes"]
["Os04g0485700","Os04g0485700","LOC_Os04g40900.1",1.5165644,1.0717888,2.384163,1.6575054,0.016914232,1820,0.016914232,0.0226876090750436,0.0372763651384615,"Yes"]
["Os05g0389600","Os05g0389600","LOC_Os05g32350.1",2.2815442,0.6658797,2.0260782,1.657834,0.029800374,2694,0.029800374,0.0335826477187733,0.0443687082828507,"Yes"]
["GT_Os_A_Specific_0060071","Os01g0852200","LOC_Os01g63290.1",1.3598552,1.5064373,2.1086845,1.6583257,0.0030221422,417,0.003022142,0.00519820493642483,0.0290690924748201,"Yes"]
["Os10g0130500","Os10g0130500","LOC_Os10g04050.1",1.5995345,0.9761119,2.406763,1.6608032,0.017292382,1850,0.017292382,0.0230615806532036,0.0374917536227027,"Yes"]
["Os03g0169800","Os03g0169800","LOC_Os03g07370.1",2.3514147,0.660882,1.9761648,1.6628205,0.031419355,2811,0.031419355,0.0350411368735976,0.0448320999306296,"Yes"]
["Os02g0822100","Os02g0822100","LOC_Os02g57620.1",1.4588995,1.3937078,2.137743,1.6634501,0.004065719,559,0.004065719,6.96833707304911E-3,0.0291728066350626,"Yes"]
["Os09g0459600","Os09g0459600","LOC_Os09g28560.1",1.6191559,1.382458,1.990943,1.6641855,0.020431954,2096,0.020431954,0.0261281475941161,0.0390995073921755,"Yes"]
["Os07g0539100","Os07g0539100","LOC_Os07g35480.1",2.0562258,0.70964193,2.2283478,1.6647385,0.035957173,3065,0.035957173,0.0382074295686861,0.0470552107350734,"Yes"]
["Os07g0520800","Os07g0520800","LOC_Os07g33660.1",1.3835163,1.1509676,2.4615235,1.6653358,0.038088426,3174,0.038088426,0.0395661929693343,0.0481325383383742,"Yes"]
["Os10g0162400","Os10g0162400","LOC_Os10g07480.1",1.3738718,1.7224522,1.9045882,1.6669707,0.015973227,1739,0.015973227,0.0216778858140114,0.0368422159269695,"Yes"]
["Os05g0344200","Os05g0344200","LOC_Os05g27780.1",1.4755611,1.9296627,1.5976992,1.667641,0.0068718703,901,0.00687187,0.0112316130640737,0.0305916432519422,"Yes"]
["GT_Os_A_Specific_0068410","Os04g0608100","LOC_Os04g51880.1",2.1712117,1.1329598,1.7034469,1.6692061,0.014160067,3340,0.04099045,0.0416355023684866,0.049225357769461,"Yes"]
["Os12g0136500","Os12g0136500","LOC_Os12g04204.1",1.8404799,1.0841236,2.0853882,1.6699972,0.009152771,1146,0.009152771,0.0142857142857142,0.0320346985,"Yes"]
["Os06g0172000","Os06g0172000","LOC_Os06g07550.1",1.4426317,1.3572159,2.2105174,1.6701217,0.004709496,645,0.004709496,0.00804038893044128,0.0292864937302325,"Yes"]
["Os12g0550600","Os12g0550600","None",2.153141,0.97139454,1.89009,1.6715418,0.01962797,2020,0.01962797,0.025180752929444,0.0389741523118811,"Yes"]
["Os06g0160600","Os06g0160600","LOC_Os06g06550.1",1.3284745,1.4762182,2.2111387,1.6719438,0.041096803,3345,0.041096803,0.0416978309648466,0.0492793054807174,"Yes"]
["Os04g0482900","Os04g0482900","LOC_Os04g40670.1",2.090579,1.331707,1.5974951,1.6732603,0.0021240148,298,0.002124015,0.00371478434305659,0.0285886716946308,"Yes"]
["Os01g0343300","Os01g0343300","LOC_Os01g24070.1",1.2003298,1.7506018,2.0730839,1.6746718,0.011037035,1333,0.011037035,0.0166168037895786,0.0332104631545386,"Yes"]
["Os01g0574800","Os01g0574800","LOC_Os01g39290.1",1.1183419,1.7833352,2.1250043,1.6755605,0.007897054,1011,0.007897054,0.012602842183994,0.0313304486587537,"Yes"]
["Os06g0667500","Os06g0667500","LOC_Os06g45660.1",1.7922211,0.9646435,2.2703667,1.6757437,0.015549838,1704,0.015549838,0.0212415856394913,0.0366023475457746,"Yes"]
["Os02g0705000","Os02g0705000","LOC_Os02g47610.1",1.2352376,1.1653085,2.627345,1.6759638,0.028603781,2619,0.028603781,0.0326477187733732,0.0438067069839633,"Yes"]
["Os01g0769200","Os01g0769200","LOC_Os01g56320.1",2.0841074,1.1596227,1.7842646,1.6759982,0.0038714688,533,0.003871469,0.00664422837197706,0.0291340753452157,"Yes"]
["Os10g0371100","Os10g0371100","LOC_Os10g22600.1",1.0944061,2.4231539,1.515934,1.6778313,0.036480464,3090,0.036480464,0.0385190725504861,0.0473537673475728,"Yes"]
["GT_Os_A_Specific_0562468","Os09g0531900","LOC_Os09g36190.1",1.6578126,1.4366751,1.9397058,1.6780645,0.00081624195,67,0.000422638,0.000835203191224133,0.0253015077313432,"Yes"]
["Os06g0624200","Os06g0624200","None",1.5762496,2.1250496,1.3375473,1.6796155,0.012690077,1464,0.012690077,0.0182498130142109,0.0347676904692622,"Yes"]
["Os01g0753500","Os01g0753500","LOC_Os01g54990.1",1.0642142,2.1076012,1.8673258,1.6797137,0.009895314,1220,0.009895314,0.0152081775118424,0.0325328725032786,"Yes"]
["Os06g0332800","Os06g0332800","LOC_Os06g22690.1",1.8844533,0.8990321,2.2567883,1.6800913,0.022315253,2223,0.022315253,0.0277112939416604,0.0402638235641025,"Yes"]
["Os07g0665000","Os07g0665000","LOC_Os07g46980.1",1.6056714,1.5941243,1.8406191,1.6801382,0.020578442,2104,0.020578442,0.0262278733482922,0.0392301002195817,"Yes"]
["Os03g0364500","Os03g0364500","LOC_Os03g24940.1",2.3825102,0.6344876,2.0243387,1.6804456,0.037033312,3132,0.037033312,0.0390426327599102,0.0474267606743295,"Yes"]
["GT_Os_A_Specific_0025145","Os02g0704966","LOC_Os02g47605.1",1.1810017,1.7170186,2.1486707,1.6822304,3.8758828E-3,536,0.003875883,0.00668162552979306,0.029004042375,"Yes"]
["Os03g0198600","Os03g0198600","LOC_Os03g10210.1",1.4648595,1.6560812,1.9268169,1.6825858,0.0036566146,509,0.003656615,0.00634505110944901,0.0288147009135559,"Yes"]
["Os01g0782200","Os01g0782200","LOC_Os01g57350.1",2.0145607,1.3766623,1.6614232,1.6842154,0.034203734,2975,0.034203734,0.0370855148342059,0.0461146813694117,"Yes"]
["Os07g0281900","Os07g0281900","None",1.3571606,0.9399471,2.758994,1.6853672,0.03791073,3167,0.03791073,0.0394789329344303,0.0480138737069782,"Yes"]
["Os12g0106000","Os12g0106000","LOC_Os12g01530.1",2.2953663,1.645299,1.1208181,1.6871611,0.031035,2784,0.031035,0.0347045624532535,0.0447131411637931,"Yes"]
["Os03g0782500","Os03g0782500","LOC_Os03g56950.1",1.8208914,0.9192109,2.3268466,1.688983,0.026976325,2530,0.026976325,0.031538269758165,0.0427676045750988,"Yes"]
["Os10g0492000","Os10g0492000","LOC_Os10g35010.1",1.4697199,1.5009623,2.1020412,1.6909078,0.010144595,1241,0.010144595,0.0154699576165544,0.0327880503988718,"Yes"]
["Os04g0168400","Os04g0168400","LOC_Os04g08640.1",0.71687603,1.7092962,2.6504707,1.6922144,0.04042958,3312,0.04042958,0.0412864622288706,0.0489622721557971,"Yes"]
["Os04g0166600","Os04g0166600","LOC_Os04g08450.1",2.5175638,0.8587222,1.7036209,1.6933023,0.024871724,2394,0.024871724,0.0298429319371727,0.0416710463508772,"Yes"]
["Os03g0591000","Os03g0591000","LOC_Os03g39407.1",1.2413621,1.5413098,2.2979608,1.6935443,0.008722567,1106,0.008722567,0.0137870855148342,0.0316331069050632,"Yes"]
["Os03g0736600","Os03g0736600","LOC_Os03g52660.1",2.4447231,0.9670105,1.6710663,1.6942667,0.039740544,3276,0.039740544,0.0408376963350785,0.0486566916923077,"Yes"]
["Os03g0769700","Os03g0769700","LOC_Os03g55980.1",1.6625848,1.8843842,1.5370369,1.6946687,0.008281884,1049,0.008281884,0.01307653951633,0.0316669558856053,"Yes"]
["Os02g0151500","Os09g0436500","None",1.8100247,1.1608052,2.1173801,1.6960701,0.019578576,2013,0.019578576,0.02509349289454,0.039011260971684,"Yes"]
["GT_Os_A_Specific_0173476","Os03g0300900","LOC_Os03g18890.1",1.1979575,2.0731926,1.8204107,1.697187,0.0030407277,128,0.0008828,1.59561206681625E-3,0.027663365625,"Yes"]
["Os03g0209500","Os03g0209500","LOC_Os03g11110.1",1.2158742,1.8605733,2.0188403,1.6984292,0.026227003,2477,0.026227003,0.0308775866367489,0.0424693213698021,"Yes"]
["Os03g0439500","Os03g0439500","LOC_Os03g32470.1",1.9023433,1.0645165,2.12845,1.6984366,0.012652976,1454,0.012652976,0.0181251558214909,0.034904461303989,"Yes"]
["Os02g0828600","Os02g0828600","LOC_Os02g58180.1",1.3683152,0.99469376,2.7372017,1.7000703,0.02947941,2676,0.02947941,0.0333582647718773,0.0441860663340807,"Yes"]
["Os_A_Specific_0237240","Os11g0559533","None",2.2074804,0.8098755,2.0845518,1.7006359,0.042528756,3413,0.042528756,0.0425454998753428,0.0499803223896864,"Yes"]
["Os03g0845300","Os03g0845300","LOC_Os03g62830.1",1.431675,1.6529698,2.027762,1.7041355,3.8930438E-3,539,3.893044E-3,0.00671902268760907,0.0289703144415584,"Yes"]
["Os05g0561400","Os05g0561400","LOC_Os05g48740.1",1.4524126,1.4785194,2.1822762,1.7044028,3.1026367E-3,431,0.003102637,0.00537272500623286,0.0288739605730858,"Yes"]
["Os04g0611700","Os04g0611700","LOC_Os04g52210.1",1.7087173,1.2978411,2.1070065,1.7045217,0.0035158102,490,0.00351581,0.00610820244328097,0.0287794161428571,"Yes"]
["Os04g0583200","Os04g0583200","LOC_Os04g49370.1",1.6108189,1.6131153,1.8898945,1.7046095,0.0019276341,271,0.001927634,0.00337820992271254,0.028530405808118,"Yes"]
["Os08g0154000","Os08g0154000","LOC_Os08g05790.1",1.9426389,0.9537535,2.21775,1.7047142,0.012660479,1459,0.012660479,0.0181874844178509,0.0348054703694311,"Yes"]
["Os01g0706700","Os01g0706700","LOC_Os01g51040.1",2.1707911,1.3192973,1.6243458,1.7048115,0.0068921503,906,0.00689215,0.0112939416604338,0.0305125978476821,"Yes"]
["Os09g0428000","Os09g0428000","LOC_Os09g25900.1",1.758626,1.0042892,2.3570108,1.706642,0.017535586,1864,0.017535586,0.0232361007230117,0.0377334954109442,"Yes"]
["GT_Os_A_Specific_0230767","Os05g0517500","LOC_Os05g44130.1",1.3754168,1.8194962,1.9262266,1.7070465,0.0034473932,214,1.466621E-3,0.00266766392420842,0.0274888636962616,"Yes"]
["GT_Os_A_Specific_0172254","Os02g0785200","LOC_Os02g54390.1",1.4407024,2.00108,1.6808105,1.707531,0.015136067,1665,0.015136067,0.0207554225878833,0.0364629217639639,"Yes"]
["Os07g0417600","Os07g0417600","LOC_Os07g23470.1",2.7593846,1.3580503,1.0064616,1.7079655,0.036726926,3113,0.036726926,0.0388057840937422,0.0473214584600064,"Yes"]
["Os11g0204600","Os11g0204600","LOC_Os11g09850.1",0.9333968,1.584866,2.606011,1.7080913,0.029917007,2713,0.029917007,0.0338194963849414,0.0442304146984887,"Yes"]
["GT_Os_A_Specific_0009653","Os02g0128200","LOC_Os02g03580.1",2.1518526,1.0531397,1.9200296,1.7083406,0.00925387,1578,0.014001779,0.0196709050112191,0.0355900732376425,"Yes"]
["GT_Os_A_Specific_0162861","Os05g0131900","LOC_Os05g04150.1",1.1829276,2.1494236,1.8001642,1.7108384,0.016032686,25,1.41481E-4,0.000311642981800049,0.0226992116399999,"Yes"]
["Os07g0553000","Os07g0553000","LOC_Os07g36700.1",1.6126642,1.8830953,1.6368637,1.7108744,0.024996614,2404,0.024996614,0.0299675891298927,0.0417060810124792,"Yes"]
["Os04g0555000","Os04g0555000","LOC_Os04g46860.1",1.7081642,1.1439514,2.2883177,1.7134777,0.0074938536,965,0.007493854,0.0120294190974819,0.0311480294238342,"Yes"]
["Os03g0323900","Os03g0323900","LOC_Os03g20760.1",1.4514909,1.432085,2.276422,1.7199993,0.014586529,1633,0.014586529,0.0203565195711792,0.0358276594115125,"Yes"]
["Os03g0774400","Os03g0774400","LOC_Os03g56320.1",2.058075,1.1904964,1.9155016,1.7213577,0.031199202,2798,0.031199202,0.0348790825230615,0.0447248031529664,"Yes"]
["Os02g0184200","Os02g0184200","LOC_Os02g09150.1",2.414815,1.031724,1.7192764,1.7219385,0.018248178,1920,0.018248178,0.0239341810022438,0.0381215843531249,"Yes"]
["Os07g0545100","Os07g0545100","LOC_Os07g36110.1",1.692266,1.6946669,1.7794552,1.7221293,0.02769422,2576,0.02769422,0.0321116928446771,0.0431217066847826,"Yes"]
["Os04g0678200","Os04g0678200","LOC_Os04g58160.1",1.5568857,1.6646729,1.9516697,1.7244095,0.003906583,543,0.003906583,0.00676888556469708,0.0288569142044198,"Yes"]
["Os08g0101700","Os08g0101700","LOC_Os08g01140.1",2.390226,0.7190089,2.0679708,1.7257352,0.037103824,3138,0.037103824,0.0391174270755422,0.0474262071586998,"Yes"]
["Os12g0517100","Os12g0517100","LOC_Os12g33230.1",0.7712631,2.4096065,1.9968252,1.7258983,0.021916972,2200,0.021916972,0.0274245823984043,0.03995862486,"Yes"]
["Os01g0305900","Os01g0305900","LOC_Os01g19970.1",1.6828175,1.5077496,1.9908972,1.7271547,0.020718753,2110,0.020718753,0.0263026676639242,0.039385269328436,"Yes"]
["Os04g0603900","Os04g0603900","None",1.4940505,1.8954854,1.7921729,1.7272363,0.0049183983,675,4.918398E-3,0.00841436050860134,0.0292262138933333,"Yes"]
["Os01g0851700","Os01g0851700","LOC_Os01g63270.1",1.8537235,1.1768885,2.153758,1.7281233,6.6889934E-3,872,0.006688993,0.0108701072051857,0.0307678336272935,"Yes"]
["Os06g0145800","Os06g0145800","LOC_Os06g05350.1",1.3075194,1.1136088,2.7637591,1.7282958,0.029394403,2670,0.029394403,0.0332834704562453,0.0441576593382022,"Yes"]
["Os11g0290600","Os11g0290600","LOC_Os11g18660.1",1.3301668,1.0194783,2.8357534,1.7284662,0.042280495,3396,0.042280495,0.0423335826477187,0.0499372984231448,"Yes"]
["Os03g0851700","Os03g0851700","LOC_Os03g63480.1",1.9190483,1.1504974,2.1179276,1.7291578,0.0060894275,810,6.089428E-3,0.0100972326103216,0.0301539453185185,"Yes"]
["Os11g0309000","Os11g0309000","LOC_Os11g20384.1",2.1630058,1.0602045,1.9645176,1.7292427,0.009376124,1172,0.009376124,0.0146098229867863,0.0320884243720136,"Yes"]
["Os05g0227100","Os05g0227100","LOC_Os05g13904.1",1.6818199,1.3055019,2.2134714,1.7335978,0.0032808534,458,0.003280853,0.00570929942657691,0.0287325357707423,"Yes"]
["Os12g0544600","Os12g0544600","LOC_Os12g35940.1",1.6628642,1.4627767,2.0759656,1.733869,0.04146544,3357,0.04146544,0.0418474195961107,0.0495436043610366,"Yes"]
["Os04g0390100","Os04g0390100","LOC_Os04g32030.1",1.886486,1.486681,1.8284855,1.7338842,0.00048506257,81,0.000485063,1.00972326103216E-3,0.0240196011481481,"Yes"]
["Os02g0498600","Os02g0498600","None",1.238565,1.2592192,2.7110758,1.7362866,0.025529938,2434,0.025529938,0.0303415607080528,0.0420709044034511,"Yes"]
["GT_Os_A_Specific_0145451","Os05g0555300","LOC_Os05g48160.1",2.3855023,0.81662273,2.0116143,1.7379131,0.027929025,3243,0.039297074,0.0404263275991024,0.0486033190915818,"Yes"]
["Os11g0550800","Os11g0550800","LOC_Os11g34940.1",1.5088539,0.9608574,2.7451134,1.7382749,0.039400764,3249,0.039400764,0.0405011219147344,0.048641571069252,"Yes"]
["Os07g0668700","Os07g0668700","LOC_Os07g47250.1",1.8987103,1.5636616,1.7547817,1.7390512,0.0025975816,364,0.002597582,0.00453752181500872,0.0286233555,"Yes"]
["Os05g0204600","Os05g0204600","LOC_Os05g11510.1",1.6459484,1.5277996,2.0440755,1.7392745,0.004665274,641,0.004665274,0.00799052605335327,0.0291925335631825,"Yes"]
["Os11g0474100","Os11g0474100","None",1.8185072,1.4316549,1.9685373,1.7395664,0.020128388,2065,0.020128388,0.0257417102966841,0.0390968349966101,"Yes"]
["Os03g0686700","Os03g0686700","None",0.9902773,1.9648652,2.26867,1.7412709,0.010933599,1323,0.010933599,0.0164921465968586,0.0331478953809523,"Yes"]
["Os12g0106100","Os12g0106100","LOC_Os12g01540.1",2.5903082,0.9185114,1.7151628,1.7413274,0.021421602,2158,0.021421602,0.0269010221889803,0.0398155911130676,"Yes"]
["Os01g0221900","Os01g0221900","LOC_Os01g12230.1",1.2143407,1.7494922,2.2631125,1.7423152,0.0084242895,1066,0.00842429,0.0132884567439541,0.0316977740994371,"Yes"]
["Os02g0597700","Os02g0597700","LOC_Os02g38410.1",1.6443558,1.630172,1.9537163,1.7427479,0.01134289,1355,0.01134289,0.0168910496135627,0.0335766286273062,"Yes"]
["Os06g0472000","Os06g0472000","LOC_Os06g27760.1",1.4722886,1.5259094,2.233419,1.7438723,0.029842723,2703,0.029842723,0.0336948391922213,0.0442838187025527,"Yes"]
["Os01g0130400","Os01g0130400","LOC_Os01g03950.1",1.530447,2.175294,1.5268831,1.744208,0.022485005,2240,0.022485005,0.0279232111692844,0.040262212078125,"Yes"]
["Os01g0243300","Os01g0243300","None",1.3377347,1.7195525,2.1825614,1.7466162,3.3613376E-3,468,0.003361338,0.00583395661929693,0.0288083904230769,"Yes"]
["Os05g0557900","Os05g0557900","LOC_Os05g48416.1",1.2930126,2.0259018,1.9255667,1.7481604,0.042304277,3398,0.042304277,0.0423585140862627,0.0499359785306062,"Yes"]
["Os01g0917400","Os01g0917400","LOC_Os01g68860.1",1.9672632,1.279479,2.0014753,1.7494059,0.010826795,1306,0.010826795,0.0162802293692346,0.033251358916539,"Yes"]
["Os03g0198500","Os03g0198500","LOC_Os03g10200.1",1.9396334,1.4960613,1.8146734,1.7501227,0.01432817,1609,0.01432817,0.0200573423086512,0.0357180173213175,"Yes"]
["Os01g0283300","Os01g0283300","LOC_Os01g18080.1",1.2754202,1.8499937,2.1333265,1.7529135,0.0038183753,527,0.003818375,6.56943405634505E-3,0.02906167386148,"Yes"]
["Os07g0511400","Os07g0511400","LOC_Os07g32710.1",2.5549026,1.0952559,1.6154699,1.7552094,0.026174843,2476,0.026174843,0.0308651209174769,0.0424019770892568,"Yes"]
["Os06g0713000","Os06g0713000","LOC_Os06g49880.1",1.097599,1.7762108,2.3947716,1.7561938,0.008934192,1128,0.008934192,0.0140613313388182,0.0317686561276595,"Yes"]
["Os12g0148500","Os12g0148500","None",1.6997571,1.2542386,2.3149734,1.756323,0.0053236233,721,0.005323623,0.00898778359511343,0.0296158832912621,"Yes"]
["Os08g0285600","Os08g0285600","LOC_Os08g18920.1",1.3822341,1.9590201,1.9326539,1.7579694,0.0019296161,272,0.001929616,0.00339067564198454,0.0284547418235294,"Yes"]
["Os03g0586400","Os03g0586400","LOC_Os03g38940.1",1.7391539,1.5659828,1.9708209,1.7586526,1.9122679E-4,31,1.91227E-4,0.000386437297432061,0.0247423063548387,"Yes"]
["Os08g0497300","Os08g0497300","LOC_Os08g38850.1",1.9505668,1.3559284,1.9719768,1.7594906,0.0012230724,186,1.223072E-3,0.00231862378459237,0.0263749558709677,"Yes"]
["Os01g0896500","Os01g0896500","LOC_Os01g67120.1",2.089037,0.9475403,2.244854,1.7604771,0.035144046,3020,0.035144046,0.037646472201446,0.0466764134125827,"Yes"]
["Os01g0371500","Os01g0371500","LOC_Os01g27390.1",1.7783012,1.5227532,1.9825773,1.7612106,0.0031127185,434,0.003112719,0.00541012216404886,0.0287675481774193,"Yes"]
["Os03g0391400","Os03g0391400","LOC_Os03g27370.1",1.1225905,1.2510796,2.9101515,1.7612739,0.03587795,3060,0.03587795,0.0381451009723261,0.0470282540686274,"Yes"]
["GT_Os_A_Specific_0093587","Os12g0615400","LOC_Os12g42090.1",1.8978615,1.0925894,2.2984252,1.7629586,0.041555025,3363,0.041555025,0.0419222139117427,0.0495620592551293,"Yes"]
["Os01g0978100","Os01g0978100","LOC_Os01g74650.1",2.114622,1.205286,1.9725552,1.7641544,5.9162625E-3,792,0.005916263,0.00987284966342558,0.0299622864810606,"Yes"]
["Os10g0325400","Os10g0325400","LOC_Os10g17790.1",1.7821097,1.4123425,2.0981588,1.7642037,0.040984273,3339,0.040984273,0.0416230366492146,0.049232680144654,"Yes"]
["Os07g0695700","Os07g0695700","LOC_Os07g49510.1",1.8683372,1.9380875,1.4929075,1.7664441,0.0060711317,806,0.006071132,0.0100473697332336,0.0302125439851116,"Yes"]
["Os04g0514800","Os04g0514800","LOC_Os04g43490.1",2.3154674,0.6289911,2.3590913,1.7678499,0.034192685,2974,0.034192685,0.0370730491149339,0.0461152856540013,"Yes"]
["Os06g0237900","Os06g0237900","LOC_Os06g13070.1",1.3919702,1.7963824,2.1197572,1.76937,0.01847727,1937,0.01847727,0.0241460982298678,0.03826139905524,"Yes"]
["GT_Os_A_Specific_0020564","Os05g0455200","LOC_Os05g38120.1",1.530716,1.7984395,1.9791403,1.769432,0.0010372549,151,0.001037255,1.8823236100723E-3,0.0275525152649006,"Yes"]
["GT_Os_A_Specific_0021798","Os02g0822600","LOC_Os02g57670.1",2.0116525,0.80947495,2.4886518,1.7699264,0.029991992,2905,0.033039905,0.0362129144851657,0.0456189531686747,"Yes"]
["Os08g0347500","Os08g0347500","LOC_Os08g25890.1",2.2408113,0.79184055,2.2857046,1.7727855,0.03992227,3288,0.03992227,0.0409872849663425,0.0487007983485401,"Yes"]
["Os12g0454600","Os12g0454600","LOC_Os12g26880.1",1.543293,1.3371444,2.43818,1.7728724,0.02977256,2693,0.02977256,0.0335701819995013,0.0443437572075751,"Yes"]
["Os12g0209000","Os12g0209000","LOC_Os12g10640.1",1.764154,1.2065434,2.3498466,1.7735147,0.012279638,1432,0.012279638,0.0178509099975068,0.0343949916326815,"Yes"]
["Os06g0475800","Os06g0475800","LOC_Os06g28150.1",1.8645067,1.4937105,1.9629741,1.7737304,0.0009978771,143,0.000997877,1.78259785589628E-3,0.0279894031258741,"Yes"]
["Os09g0528000","Os09g0528000","LOC_Os09g35890.1",1.7701921,1.1831708,2.3680077,1.7737902,0.03627034,3078,0.03627034,0.0383694839192221,0.0472645658674463,"Yes"]
["Os01g0133900","Os01g0133900","LOC_Os01g04230.1",1.4351659,1.7422996,2.1445932,1.7740196,1.8034359E-3,261,0.001803436,0.00325355272999252,0.0277148727816091,"Yes"]
["GT_Os_A_Specific_0141469","Os12g0539751","LOC_Os12g35465.1",1.7546782,1.577692,1.9903083,1.7742262,0.00039297243,63,3.92972E-4,0.000785340314136125,0.0250192173333333,"Yes"]
["Os11g0275200","Os11g0275200","LOC_Os11g17504.1",1.4559555,1.93467,1.9345641,1.7750632,0.033312343,2922,0.033312343,0.0364248317127898,0.0457275180605749,"Yes"]
["Os01g0221800","Os01g0221800","None",2.0401292,1.0650783,2.2245889,1.7765988,0.02561152,2441,0.02561152,0.0304288207429568,0.0420843124621056,"Yes"]
["Os01g0728800","Os02g0801700","LOC_Os02g55830.1",2.3503604,1.3443451,1.6393838,1.7780298,0.0050416803,1052,0.00834263,0.0131139366741461,0.0318082594391634,"Yes"]
["Os04g0304200","Os04g0304200","LOC_Os04g23890.1",1.9550982,1.0541763,2.3282022,1.779159,0.039319765,3246,0.039319765,0.0404637247569184,0.0485864378974121,"Yes"]
["Os12g0628400","Os12g0628400","LOC_Os12g43363.1",1.956728,1.6070695,1.7742934,1.7793636,0.033692442,2945,0.033692442,0.0367115432560458,0.04588807635382,"Yes"]
["GT_Os_A_Specific_0247826","Os02g0614250","None",1.8438654,2.0322146,1.4660363,1.7807055,0.011257241,1346,0.011257241,0.0167788581401146,0.033545909101783,"Yes"]
["Os10g0412600","Os10g0412600","LOC_Os10g27274.1",1.3614931,2.2038627,1.7771163,1.7808241,0.042065345,3386,0.042065345,0.0422089254549987,0.0498299169506792,"Yes"]
["GT_Os_A_Specific_0056167","Os05g0230700","LOC_Os05g14180.1",1.6066694,1.5927277,2.1430836,1.7808269,0.019659322,2845,0.031897932,0.0354649713288456,0.0449710387528998,"Yes"]
["Os08g0524800","Os08g0524800","LOC_Os08g41320.1",1.7036843,2.0238771,1.6193967,1.7823194,0.0030936035,430,0.003093604,0.00536025928696085,0.0288568503348837,"Yes"]
["Os02g0731700","Os02g0731700","LOC_Os02g49880.1",2.799137,1.0624256,1.4874241,1.7829956,0.03339259,2929,0.03339259,0.0365120917476938,0.0457281251246159,"Yes"]
["Os07g0408500","Os07g0408500","LOC_Os07g22580.1",1.6580706,1.6225209,2.0740256,1.7848724,4.733236E-3,648,4.733236E-3,0.00807778608825729,0.0292978543148148,"Yes"]
["Os05g0480200","Os05g0480200","LOC_Os05g40190.1",1.8870835,1.1337657,2.3353372,1.7853955,0.02198748,2203,0.02198748,0.0274619795562203,0.040032583876532,"Yes"]
["Os01g0851600","Os01g0851600","LOC_Os01g63260.1",2.1759648,0.9641342,2.2169147,1.7856712,0.019064637,1974,0.019064637,0.0246073298429319,0.0387377198617021,"Yes"]
["GT_Os_A_Specific_0067503","Os02g0110900","LOC_Os02g02070.1",2.6535792,1.1644945,1.5410209,1.7863649,0.037581783,3147,0.037581783,0.0392296185489902,0.047899755835081,"Yes"]
["Os02g0124800","Os02g0124800","LOC_Os02g03230.1",2.5587091,0.69681644,2.106429,1.7873182,0.032765675,2895,0.032765675,0.0360882572924457,0.0453965880569948,"Yes"]
["Os01g0225600","Os01g0225600","LOC_Os01g12580.1",2.197013,1.1769743,1.9908404,1.7882758,0.011620187,1382,0.011620187,0.0172276240339067,0.0337254486664254,"Yes"]
["Os03g0279700","Os03g0279700","LOC_Os03g17150.1",2.3135262,1.6320267,1.4217896,1.7891141,0.011590509,1375,0.011590509,0.0171403639990027,0.0338105684356363,"Yes"]
["Os11g0104400","Os11g0104400","LOC_Os11g01340.2",2.160748,1.2729554,1.9347825,1.7894953,0.012215378,1427,0.012215378,0.0177885814011468,0.0343348851843027,"Yes"]
["Os09g0549400","Os09g0549400","LOC_Os09g37700.1",1.1642041,2.3121948,1.8937464,1.7900485,0.031988565,2848,0.031988565,0.0355023684866616,0.0450513111709971,"Yes"]
["Os06g0626200","Os06g0626200","LOC_Os06g42060.1",1.7999244,1.3530602,2.217214,1.7900662,0.012671159,1461,0.012671159,0.0182124158563949,0.0347871449342915,"Yes"]
["Os06g0661800","Os06g0661800","LOC_Os06g45100.1",1.4287319,2.1960428,1.7523599,1.7923781,0.022631802,2250,0.022631802,0.0280478683620044,0.040344959032,"Yes"]
["GT_Os_A_Specific_0101756","Os11g0466966","LOC_Os11g27799.1",1.9072886,1.2831049,2.1975212,1.7959715,0.008193915,1042,0.008193915,0.012989279481426,0.0315410682005758,"Yes"]
["Os02g0255700","Os02g0255700","LOC_Os02g15660.1",2.1538868,1.0687475,2.1674252,1.7966865,0.04150046,3360,0.04150046,0.0418848167539267,0.049541174125,"Yes"]
["GT_Os_A_Specific_0032346","Os05g0101400","LOC_Os05g01110.1",1.7132688,1.1260324,2.554891,1.7980641,0.032206673,1533,0.013489584,0.019109947643979,0.0352946649863013,"Yes"]
["Os09g0461700","Os09g0461700","LOC_Os09g28720.1",1.5625386,1.6150427,2.2174983,1.7983599,0.005566084,754,0.005566084,0.0093991523310895,0.0296094998992042,"Yes"]
["Os10g0577500","Os10g0577500","LOC_Os10g42670.1",2.243289,1.3266277,1.8288822,1.7995996,0.0025111486,347,0.002511149,0.00432560458738469,0.0290265666829971,"Yes"]
["Os03g0299600","Os03g0299600","LOC_Os03g18770.1",2.10363,1.0418177,2.2559185,1.8004555,0.014096103,1593,0.014096103,0.0198578908002991,0.0354924476666666,"Yes"]
["Os02g0189000","Os02g0189000","LOC_Os02g09590.1",1.897666,1.027585,2.4804592,1.8019034,0.021827316,2191,0.021827316,0.0273123909249563,0.0399586328051118,"Yes"]
["GT_Os_A_Specific_0027569","Os01g0696000","LOC_Os01g50120.1",1.9853196,1.6416211,1.7815709,1.8028373,0.0072925696,1435,0.012299208,0.0178883071553228,0.0343777862634146,"Yes"]
["Os09g0533900","Os09g0533900","LOC_Os09g36350.1",1.5732474,1.3657346,2.473496,1.8041593,0.054483995,3044,0.035512988,0.037945649463974,0.0467945449632063,"Yes"]
["Os12g0459300","Os12g0459300","LOC_Os12g27370.1",2.1126137,1.2778511,2.0233102,1.8045917,0.007843255,1003,0.007843255,0.012503116429818,0.0313652002043868,"Yes"]
["Os02g0754300","Os02g0754300","LOC_Os02g51790.1",1.491107,1.0872889,2.8404865,1.8062941,0.034941267,3014,0.034941267,0.037571677885814,0.0464994764223623,"Yes"]
["Os12g0287800","Os12g0287800","None",1.8177576,1.0927205,2.5090861,1.8065214,0.036554467,3101,0.036554467,0.0386561954624781,0.0472815114920993,"Yes"]
["Os03g0309800","Os03g0309800","LOC_Os03g19650.1",1.4242578,1.5546207,2.4468474,1.8085753,0.01678452,1808,0.01678452,0.0225380204437796,0.0372360120132743,"Yes"]
["Os08g0288200","Os08g0288200","LOC_Os08g19140.1",2.1138368,0.8378463,2.4760542,1.8092457,0.03181717,2841,0.03181717,0.0354151084517576,0.0449203339915522,"Yes"]
["Os10g0463900","Os10g0463900","LOC_Os10g32690.1",1.5138764,2.0641313,1.8527713,1.8102597,1.3324495E-3,198,1.33245E-3,0.00246821241585639,0.0269922068181818,"Yes"]
["Os03g0452300","Os03g0452300","LOC_Os03g34040.1",2.101386,0.9568434,2.3735342,1.8105879,0.018990329,1971,0.018990329,0.0245699326851159,0.0386454640380517,"Yes"]
["Os01g0603100","Os01g0603100","LOC_Os01g41890.1",2.133297,1.4498291,1.8515625,1.8115629,0.0016651192,232,0.001665119,0.00289204687110446,0.0287878978836206,"Yes"]
["Os02g0668500","Os02g0668500","LOC_Os02g44820.1",1.8603106,1.6888933,1.890233,1.8131456,1.6885345E-3,241,0.001688535,0.00300423834455248,0.0281025472406639,"Yes"]
["Os03g0749300","Os03g0749300","LOC_Os03g53800.1",1.8369284,1.5857849,2.01793,1.8135477,5.217574E-4,88,0.000521757,1.09698329593617E-3,0.0237814468977272,"Yes"]
["Os01g0894700","Os01g0894700","LOC_Os01g66980.1",1.9818039,1.0477657,2.4175425,1.815704,0.04061522,3322,0.04061522,0.0414111194215906,0.0490390269175195,"Yes"]
["Os01g0702500","Os01g0702500","LOC_Os01g50700.1",1.8734818,2.0379477,1.5397406,1.8170567,0.00061957695,96,0.000619577,1.19670905011219E-3,0.0258867015312499,"Yes"]
["GT_Os_A_Specific_0002645","Os06g0677400","LOC_Os06g46372.1",1.4136581,2.1931753,1.846571,1.8178015,0.009942666,690,5.045557E-3,0.00860134629768137,0.0293300422130434,"Yes"]
["Os09g0441900","Os09g0441900","LOC_Os09g26999.1",2.5815268,0.6589365,2.2192578,1.8199071,0.050259724,3317,0.04047205,0.0413487908252306,0.0489398228971962,"Yes"]
["Os01g0631700","Os01g0631700","LOC_Os01g44110.1",2.7862606,1.2310925,1.4435287,1.8202939,0.0423201,3399,0.0423201,0.0423709798055347,0.0499399591350397,"Yes"]
["GT_Os_A_Specific_0038971","Os03g0666700","LOC_Os03g46410.1",1.5967631,1.413321,2.4519906,1.8206916,0.024038663,2399,0.024961239,0.0299052605335327,0.0417338597869945,"Yes"]
["Os05g0452500","Os05g0452500","None",1.6889534,1.4176335,2.359373,1.8219867,0.007480887,964,0.007480887,0.0120169533782099,0.0311263877147302,"Yes"]
["Os02g0817800","Os02g0817800","LOC_Os02g57270.1",2.4035301,1.8726048,1.1985526,1.8248959,0.012167431,1422,0.012167431,0.0177262528047868,0.0343203697194092,"Yes"]
["Os02g0253700","Os02g0253700","LOC_Os02g15460.1",2.3080988,0.7346859,2.4327593,1.8251814,0.039406948,3251,0.039406948,0.0405260533532784,0.0486192766619501,"Yes"]
["Os12g0582700","Os12g0582700","LOC_Os12g39310.1",2.045436,1.3644962,2.0680017,1.8259779,1.6918158E-3,243,0.001691816,3.02916978309648E-3,0.0279254073086419,"Yes"]
["Os06g0188800","Os06g0188800","LOC_Os06g08910.1",2.4471483,1.0402417,1.9954333,1.8276078,0.011647797,1384,0.011647797,0.0172525554724507,0.0337567296004335,"Yes"]
["Os03g0128400","Os03g0128400","LOC_Os03g03640.1",1.7125006,1.389061,2.3825169,1.8280262,0.0052732415,715,5.273242E-3,0.00891298927948142,0.0295817813454545,"Yes"]
["Os02g0503100","Os02g0503100","LOC_Os02g29960.1",1.1251798,1.7795677,2.5946002,1.8331159,0.029875474,2706,0.029875474,0.0337322363500374,0.0442832691108647,"Yes"]
["Os08g0546100","Os08g0546100","LOC_Os08g43270.1",1.3987637,1.4490266,2.653729,1.8338398,0.014364821,1615,0.014364821,0.0201321366242832,0.0356763449108359,"Yes"]
["Os01g0919700","Os01g0919700","LOC_Os01g69060.1",2.2308216,1.2011061,2.0724277,1.8347851,0.0076826313,989,0.007682631,0.0123285963600099,0.0311577683933265,"Yes"]
["Os12g0480100","Os12g0480100","LOC_Os12g29570.1",2.1062145,1.1783028,2.2230039,1.8358403,0.014124573,1596,0.014124573,0.0198952879581151,0.0354972821447368,"Yes"]
["Os09g0365100","Os09g0365100","LOC_Os09g20024.1",1.5801687,1.5631056,2.381712,1.841662,0.004361047,600,0.004361047,0.00747943156320119,0.0291535991949999,"Yes"]
["Os02g0733300","Os02g0733300","LOC_Os02g50040.1",1.4401693,2.2114968,1.8734608,1.841709,0.001997451,281,0.001997451,3.50286711543256E-3,0.0285116582241992,"Yes"]
["GT_Os_A_Specific_0204445","Os03g0229801","LOC_Os03g12815.1",2.1918535,1.0409889,2.2926526,1.8418317,0.03168702,2832,0.03168702,0.0353029169783096,0.0448787560805084,"Yes"]
["Os12g0267800","Os12g0267800","None",1.9215851,1.2157598,2.3956592,1.8443346,0.0137676895,1561,0.01376769,0.0194589877835951,0.0353761720627802,"Yes"]
["GT_Os_A_Specific_0036917","Os06g0588450","None",1.5245337,1.7067311,2.303648,1.8449711,0.0056321495,763,0.00563215,0.00951134380453752,0.029607540825688,"Yes"]
["Os08g0512500","Os08g0512500","LOC_Os08g40160.1",1.9263239,1.4301443,2.1802216,1.8455633,0.0015502744,221,0.001550274,0.00275492395911244,0.028136420877828,"Yes"]
["Os03g0685000","Os03g0685000","LOC_Os03g48040.1",1.919692,0.9386368,2.6815653,1.8466314,0.032351706,2878,0.032351706,0.0358763400648217,0.0450878015170257,"Yes"]
["GT_Os_A_Specific_0078492","Os07g0164200","LOC_Os07g06990.1",1.945365,1.1063023,2.4886541,1.8467737,0.014558272,1781,0.016487362,0.0222014460234355,0.0371312796080853,"Yes"]
["Os03g0861100","Os03g0861100","LOC_Os03g64320.1",0.98895836,1.6183887,2.9388962,1.8487477,0.04066207,3324,0.04066207,0.0414360508601346,0.0490660537815884,"Yes"]
["Os08g0421400","Os08g0421400","LOC_Os08g32570.1",1.2230201,2.2341213,2.0901403,1.8490939,0.011010497,1331,0.011010497,0.0165918723510346,0.0331803932885048,"Yes"]
["Os10g0534400","Os10g0534400","LOC_Os10g39000.1",2.5496736,0.91258526,2.0923748,1.8515445,0.029713528,2688,0.029713528,0.0335078534031413,0.0443381550625,"Yes"]
["GT_Os_A_Specific_0101982","Os03g0604401","None",1.9135485,1.1788712,2.4658365,1.8527521,0.013039868,1493,0.013039868,0.0186113188730989,0.035032090119223,"Yes"]
["Os03g0140100","Os03g0140100","LOC_Os03g04650.1",1.5152731,1.3553629,2.6930733,1.8545698,0.026254494,2478,0.026254494,0.0308900523560209,0.0424966809661016,"Yes"]
["Os01g0358300","Os01g0358300","LOC_Os01g25600.1",1.9105344,1.0478992,2.6063862,1.8549399,0.03675954,3115,0.03675954,0.0388307155322862,0.0473330706067415,"Yes"]
["Os01g0207400","Os01g0207400","LOC_Os01g10950.1",0.7710104,2.4574804,2.3366346,1.8550419,0.036903266,3124,0.036903266,0.0389429070057342,0.0473812419737516,"Yes"]
["Os01g0272800","Os01g0272800","LOC_Os01g16620.4",1.7921233,1.9348478,1.8399558,1.8556423,0.0032603785,454,0.003260379,5.6594365494889E-3,0.0288048021343612,"Yes"]
["Os04g0380200","Os04g0380200","LOC_Os04g31110.1",0.89369726,1.8876944,2.786046,1.8558125,0.03341955,2933,0.03341955,0.0365619546247818,0.0457026304295942,"Yes"]
["GT_Os_A_Specific_0046519","Os02g0115801","None",1.6904979,1.4252925,2.4549427,1.8569111,0.019619752,2017,0.019619752,0.025143355771628,0.0390157785185919,"Yes"]
["Os01g0765500","Os01g0765500","LOC_Os01g56020.1",1.2812142,2.249423,2.041994,1.8575438,0.01436116,1614,0.01436116,0.0201196709050112,0.0356893511524163,"Yes"]
["Os03g0364700","Os03g0364700","LOC_Os03g24950.1",1.6607409,1.5801501,2.3321104,1.8576671,0.008418485,1064,0.008418485,0.0132635253054101,0.0317354730592105,"Yes"]
["Os09g0409000","Os09g0409000","LOC_Os09g24350.1",1.8421593,2.3320222,1.3997622,1.8579812,0.0060245562,801,0.006024556,0.00998504113687359,0.0301679077602996,"Yes"]
["Os03g0811200","Os03g0811200","LOC_Os03g59650.1",2.0962176,0.75703096,2.7229662,1.8587383,0.03167003,2827,0.03167003,0.0352405883819496,0.0449340255854262,"Yes"]
["GT_Os_A_Specific_0032684","Os07g0568700","LOC_Os07g38130.1",2.5502486,1.0319586,1.9942665,1.8588246,0.030110274,2723,0.030110274,0.0339441535776614,0.04435266581491,"Yes"]
["Os07g0510200","Os07g0510200","LOC_Os07g32600.1",1.9434433,1.2897301,2.34795,1.8603745,0.0050020185,686,0.005002019,0.00855148342059337,0.0292464988469387,"Yes"]
["GT_Os_A_Specific_0030478","Os11g0269100","None",2.17029,1.2450924,2.1679058,1.861096,7.6130102E-3,978,0.00761301,0.0121914734480179,0.0312226821165644,"Yes"]
["Os02g0465900","Os02g0465900","LOC_Os02g26700.1",2.7757769,1.0811396,1.7290039,1.8619734,0.032778844,2897,0.032778844,0.0361131887309897,0.0453834805950983,"Yes"]
["Os02g0815700","Os02g0815700","LOC_Os02g57060.1",2.5174265,1.0678349,2.0022345,1.8624986,0.012850917,1476,0.012850917,0.0183994016454749,0.0349221057499999,"Yes"]
["GT_Os_A_Specific_0339872","Os01g0218700","LOC_Os01g11946.1",2.4514422,1.5927854,1.5438662,1.862698,0.013370432,2769,0.030890353,0.0345175766641735,0.0447458309436619,"Yes"]
["Os03g0199100","Os03g0199100","LOC_Os03g10240.1",2.2432408,1.2975345,2.052096,1.8642904,0.010227215,1245,0.010227215,0.0155198204936424,0.0329488830240963,"Yes"]
["Os03g0856700","Os03g0856700","LOC_Os03g63970.1",2.018589,1.898263,1.6810732,1.865975,0.0028856937,288,0.002050913,0.00359012715033657,0.0285632362604166,"Yes"]
["Os08g0532200","Os08g0532200","LOC_Os08g41990.1",2.0771027,1.0337286,2.4948559,1.8685623,0.013829414,1567,0.013829414,0.0195337820992271,0.0353987106279514,"Yes"]
["Os02g0169900","Os02g0169900","LOC_Os02g07350.1",2.1159048,1.1135836,2.3763351,1.8686079,0.01100447,1330,0.01100447,0.0165794066317626,0.0331871647894736,"Yes"]
["Os11g0652100","Os11g0652100","LOC_Os11g43140.1",1.1553631,2.3177958,2.1338973,1.8690187,0.026905077,2523,0.026905077,0.031451009723261,0.0427729939940546,"Yes"]
["GT_Os_A_Specific_0041867","Os05g0137200","LOC_Os05g04610.1",1.6441817,2.058949,1.904872,1.8693342,0.03653949,3098,0.03653949,0.0386187983046621,0.0473079065171078,"Yes"]
["Os12g0169100","Os12g0169100","LOC_Os12g07160.1",1.1140628,1.7893867,2.712398,1.8719492,0.015943203,1735,0.015943203,0.0216280229369234,0.0368577448028818,"Yes"]
["Os07g0162500","Os07g0162500","LOC_Os07g06840.1",1.7482252,1.596571,2.272108,1.8723015,0.017554177,1866,0.017554177,0.0232610321615557,0.0377330139051447,"Yes"]
["Os02g0608600","Os02g0608600","LOC_Os02g39570.1",2.1937137,1.5831971,1.8454423,1.8741177,0.00053101056,89,0.000531011,1.10944901520817E-3,0.023931293494382,"Yes"]
["Os10g0378000","Os10g0378000","LOC_Os10g23130.1",2.021163,1.8435879,1.7593536,1.8747015,0.0017566502,254,1.75665E-3,3.1662926950885E-3,0.0277398549212598,"Yes"]
["GT_Os_A_Specific_0017675","Os01g0946100","LOC_Os01g71780.1",1.6075959,2.6127172,1.4060969,1.87547,0.011349367,1356,0.011349367,0.0169035153328347,0.0335710258384955,"Yes"]
["Os09g0116600","Os09g0116600","LOC_Os09g02814.1",1.5911083,1.0222425,3.0152335,1.8761948,0.037677392,3153,0.037677392,0.0393044128646222,0.0479302313073263,"Yes"]
["GT_Os_A_Specific_0003372","Os03g0861700","LOC_Os03g64350.1",1.7712278,1.6234322,2.2380934,1.8775845,0.0093702255,1170,0.009370226,0.0145848915482423,0.032123056825641,"Yes"]
["Os01g0931200","Os01g0931200","LOC_Os01g70560.1",1.5536222,2.0399952,2.0401416,1.8779197,0.0006770048,100,0.000677005,1.24657192720019E-3,0.0271546705499999,"Yes"]
["Os12g0533400","Os12g0533400","LOC_Os12g34840.1",1.0566583,2.4285722,2.151207,1.8788124,0.022402612,2235,0.022402612,0.0278608825729244,0.040204419119463,"Yes"]
["Os07g0570700","Os07g0570700","LOC_Os07g38300.1",2.0792618,1.0639114,2.4942656,1.8791462,0.04057954,3320,0.04057954,0.0413861879830466,0.0490254623313253,"Yes"]
["Os02g0671800","Os02g0671800","LOC_Os02g45040.1",2.0888596,1.1192894,2.4299326,1.8793606,0.008877924,1121,0.008877924,0.0139740713039142,0.0317657030900981,"Yes"]
["GT_Os_A_Specific_0015576","Os05g0150800","LOC_Os05g05830.1",2.5977583,0.85564613,2.185317,1.8795738,0.027919872,3356,0.041444674,0.0418349538768386,0.0495335480971394,"Yes"]
["GT_Os_A_Specific_0007024","Os04g0403500","LOC_Os04g33060.1",2.0606365,1.5483422,2.0316133,1.8801974,0.0007122377,193,0.001281397,0.00240588381949638,0.0266304837668393,"Yes"]
["Os04g0676400","Os04g0676400","LOC_Os04g57970.1",0.7694621,2.6276555,2.2443423,1.8804866,0.03868319,3206,0.03868319,0.0399650959860383,0.0483962180567685,"Yes"]
["Os05g0440800","Os05g0440800","LOC_Os05g36960.1",1.0702343,1.8977222,2.6753626,1.8811064,0.01941895,2001,0.01941895,0.0249439042632759,0.0389252416041979,"Yes"]
["Os01g0217000","Os01g0217000","LOC_Os01g11810.1",1.6640186,1.8062019,2.1799755,1.8833987,0.008022542,1024,0.008022542,0.01276489653453,0.0314242343378906,"Yes"]
["Os03g0817900","Os03g0817900","LOC_Os03g60350.1",2.1618032,1.4288654,2.0599575,1.8835421,0.010328366,1255,0.010328366,0.0156444776863625,0.0330096223314741,"Yes"]
["Os08g0333100","Os08g0333100","LOC_Os08g24434.1",1.8026359,1.6004982,2.2506351,1.8845898,1.1047614E-3,164,0.001104761,0.00204437796060832,0.0270194900670731,"Yes"]
["Os02g0608900","Os02g0608900","LOC_Os02g39600.1",2.2253723,1.1943378,2.2359257,1.885212,0.034258325,2977,0.034258325,0.0371104462727499,0.0461572527964393,"Yes"]
["Os03g0219900","Os03g0219900","LOC_Os03g12020.1",2.1327848,1.0111551,2.5136557,1.8858652,0.036585514,3105,0.036585514,0.0387060583395661,0.0472607074570048,"Yes"]
["Os03g0100200","Os03g0100200","None",1.5888734,1.5046716,2.5670567,1.8868672,0.013635235,1547,0.013635235,0.019284467713787,0.0353528943665158,"Yes"]
["Os01g0248300","Os01g0248300","LOC_Os01g14550.1",2.1013274,1.0670071,2.4929738,1.8871027,0.019415066,2000,0.019415066,0.0249314385440039,0.038936914863,"Yes"]
["Os08g0475100","Os08g0475100","LOC_Os08g37040.1",1.7590561,1.8539257,2.0548782,1.8892866,0.015991082,1740,0.015991082,0.0216903515332834,0.0368622010931034,"Yes"]
["Os07g0657900","Os07g0657900","LOC_Os07g46410.1",2.4889565,0.9557791,2.2251358,1.8899571,0.01638689,1775,0.01638689,0.0221266517078035,0.0370297553746478,"Yes"]
["GT_Os_A_Specific_0089678","Os03g0737000","LOC_Os03g52690.1",1.3674526,2.3527415,1.9549532,1.8917156,0.0074296487,646,0.004719824,0.00805285464971328,0.0293052849287925,"Yes"]
["Os10g0463600","Os10g0463600","None",2.1957855,1.1609507,2.320416,1.892384,0.0071522235,927,0.007152224,0.0115557217651458,0.0309466779546925,"Yes"]
["Os02g0152900","Os02g0152900","LOC_Os02g05890.1",0.98192024,1.9031882,2.7946587,1.8932557,0.039962698,3291,0.039962698,0.0410246821241585,0.0487056765961713,"Yes"]
["Os02g0198300","Os02g0198300","LOC_Os02g10480.1",1.4177122,2.0049543,2.2595892,1.8940853,5.056947E-3,693,5.056947E-3,0.00863874345549738,0.0292689962727272,"Yes"]
["Os01g0611300","Os01g0611300","LOC_Os01g42550.1",1.1911316,2.020493,2.4711976,1.8942741,0.012915678,1481,0.012915678,0.0184617302418349,0.0349795978784605,"Yes"]
["GT_Os_A_Specific_0109619","Os01g0158566","None",2.056356,1.2079988,2.4201221,1.8948256,0.022191884,2218,0.022191884,0.0276489653453004,0.040131490858431,"Yes"]
["Os07g0673600","Os07g0673600","None",2.2716327,1.6491556,1.7646484,1.8951455,0.029408501,2672,0.029408501,0.0333084018947893,0.0441457700265718,"Yes"]
["Os12g0534200","Os12g0534200","LOC_Os12g34890.1",2.074566,1.4133158,2.2093925,1.8990914,0.0022440504,312,2.24405E-3,0.00388930441286462,0.0288489889423076,"Yes"]
["Os06g0704100","Os06g0704100","LOC_Os06g49060.1",2.319243,1.7287154,1.6525235,1.9001607,0.022166688,2215,0.022166688,0.0276115681874844,0.0401402192180586,"Yes"]
["GT_Os_A_Specific_0050743","Os05g0568900","LOC_Os05g49380.1",2.3476362,1.0515513,2.3060613,1.9017496,0.025209801,2640,0.028900415,0.0329094988780852,0.0439089259715909,"Yes"]
["GT_Os_A_Specific_0006541","Os03g0171900","LOC_Os03g07570.1",2.0544853,1.4345083,2.220643,1.9032122,0.0025382494,2100,0.020514516,0.0261780104712041,0.03918272556,"Yes"]
["Os08g0536300","Os08g0536300","LOC_Os08g42440.1",1.7829595,1.2844806,2.642424,1.903288,0.008792084,1114,0.008792084,0.0138868112690102,0.0316562378132854,"Yes"]
["Os10g0477600","Os10g0477600","LOC_Os10g33760.1",1.9614768,1.5700965,2.1798482,1.9038072,0.027550614,2563,0.027550614,0.0319496384941411,0.0431156897206398,"Yes"]
["GT_Os_A_Specific_0009557","Os03g0823800","LOC_Os03g60880.1",1.8064251,1.6861124,2.219573,1.9040369,0.009263592,1158,0.009263592,0.0144353029169783,0.0320865867979274,"Yes"]
["Os03g0784000","Os03g0784000","LOC_Os03g57070.1",2.4045658,0.9576416,2.3577795,1.9066623,0.018420722,1934,0.018420722,0.0241087010720518,0.038203472565667,"Yes"]
["GT_Os_A_Specific_0168335","Os06g0566201","None",1.0600643,1.8513079,2.8096056,1.9069926,0.040403016,3310,0.040403016,0.0412615307903266,0.0489596668205438,"Yes"]
["Os08g0318400","Os08g0318400","LOC_Os08g22852.1",2.4682274,0.9485092,2.3057747,1.9075037,0.027840529,2581,0.027840529,0.0321740214410371,0.0432655411929484,"Yes"]
["Os07g0565600","Os07g0565600","LOC_Os07g37830.1",2.1434155,0.9717512,2.6221437,1.9124368,0.023787819,2328,0.023787819,0.0290201944652206,0.0409849407255154,"Yes"]
["Os07g0475000","Os07g0475000","LOC_Os07g29240.1",1.8960109,1.1198306,2.7267709,1.9142041,0.03944931,3256,0.03944931,0.0405883819496385,0.0485968004944717,"Yes"]
["GT_Os_A_Specific_0147140","Os08g0332700","LOC_Os08g24390.1",2.01011,1.541048,2.1931114,1.9147564,0.005156138,3244,0.039299738,0.0404387933183744,0.0485916304309494,"Yes"]
["Os01g0228800","Os01g0228800","LOC_Os01g12840.1",1.6040335,1.7179193,2.4304738,1.9174756,0.003239681,450,0.003239681,0.00560957367240089,0.0288763566466666,"Yes"]
["Os04g0397500","Os04g0397500","LOC_Os04g32590.1",1.7517357,1.9265809,2.0766702,1.9183289,0.0020086737,284,0.002008674,0.00354026427324856,0.0283689838521126,"Yes"]
["Os12g0547500","Os12g0547500","LOC_Os12g36100.1",1.4030509,2.294077,2.0585046,1.9185442,0.003737178,517,0.003737178,0.00644477686362503,0.0289938509825918,"Yes"]
["Os09g0446800","Os09g0446800","LOC_Os09g27420.1",2.1484175,1.4912615,2.1163464,1.9186751,1.7292688E-3,248,0.001729269,0.00309149837945649,0.0279681369314516,"Yes"]
["GT_Os_A_Specific_0073061","Os05g0480000","LOC_Os05g40180.1",1.5743198,1.6524267,2.5298247,1.9188571,0.03133957,2807,0.03133957,0.0349912739965096,0.0447819790773067,"Yes"]
["Os05g0516400","Os05g0516400","LOC_Os05g44030.1",2.0510368,1.9065933,1.8046527,1.920761,1.506503E-3,216,1.506503E-3,2.69259536275243E-3,0.0279749237638888,"Yes"]
["Os05g0153500","Os05g0153500","LOC_Os05g06160.1",1.6534543,2.7967277,1.3133922,1.9211913,0.025041016,2409,0.025041016,0.0300299177262528,0.0416934475616438,"Yes"]
["Os02g0246600","Os02g0246600","LOC_Os02g14874.1",1.9282846,1.9509239,1.897099,1.9254359,0.0007429335,111,7.42934E-4,1.38369483919222E-3,0.0268460204864864,"Yes"]
["Os02g0720900","Os02g0720900","LOC_Os02g48900.1",1.7261171,1.4528112,2.6002398,1.9263893,0.004982426,683,0.004982426,0.00851408626277736,0.0292598985153733,"Yes"]
["GT_Os_A_Specific_0055435","Os06g0287700","LOC_Os06g17970.1",1.8515525,1.2390852,2.6926093,1.927749,0.009741212,1208,0.009780672,0.0150585888805784,0.0324753935364238,"Yes"]
["Os10g0369500","Os10g0369500","LOC_Os10g22410.1",1.4662547,2.090364,2.2315555,1.9293914,0.0053875805,730,0.005387581,0.00909997506856145,0.0296021745082191,"Yes"]
["Os11g0106700","Os11g0106700","LOC_Os11g01530.1",2.5686593,1.9853635,1.2417245,1.9319158,0.022159869,2214,0.022159869,0.0275991024682124,0.0401459957357723,"Yes"]
["GT_Os_A_Specific_0207672","Os02g0805800","LOC_Os02g56200.1",2.4846506,1.226965,2.085579,1.9323982,0.01929389,1992,0.01929389,0.0248317127898279,0.0388492935692771,"Yes"]
["Os07g0411900","Os07g0442000","LOC_Os07g26000.1",2.0762773,1.5051918,2.2203703,1.9339465,0.001591504,217,1.506701E-3,0.00270506108202443,0.0278496668709677,"Yes"]
["Os01g0502700","Os01g0502700","LOC_Os01g31800.1",1.990098,1.7023201,2.1166868,1.9363683,0.00096767076,138,0.000967671,1.72026925953627E-3,0.0281255679782608,"Yes"]
["Os09g0460500","Os09g0460500","LOC_Os09g28640.1",2.5463438,1.5968742,1.6668673,1.9366951,0.026619857,2498,0.026619857,0.0311393667414609,0.0427430930452361,"Yes"]
["Os01g0598600","Os01g0598600","LOC_Os01g41550.1",1.8528728,1.1860361,2.7728596,1.9372562,0.030162489,2726,0.030162489,0.0339815507354774,0.0443806835579603,"Yes"]
["Os09g0279400","Os09g0279400","LOC_Os09g10750.1",2.5044527,1.028409,2.2791548,1.9373388,0.024391636,2370,0.024391636,0.0295437546746447,0.0412805282683544,"Yes"]
["Os04g0586700","Os04g0586700","LOC_Os04g49700.1",1.3868718,2.0554347,2.3727007,1.9383358,0.006663889,867,0.006663889,0.0108077786088257,0.0308291335397923,"Yes"]
["Os01g0703300","Os01g0703300","LOC_Os01g50750.1",1.2319186,1.6673651,2.9229412,1.9407415,0.026048835,2468,0.026048835,0.0307653951633009,0.0423346341916531,"Yes"]
["Os04g0495500","Os04g0495500","LOC_Os04g41820.1",2.143633,1.0138044,2.6649528,1.9407967,0.029805338,2697,0.029805338,0.0336200448765893,0.044326737381535,"Yes"]
["GT_Os_A_Specific_0052807","Os05g0361900","LOC_Os05g29860.1",2.0726948,1.0650592,2.6894765,1.9424101,0.02557308,2711,0.029900236,0.0337945649463974,0.0442382318686831,"Yes"]
["Os06g0592400","Os06g0592400","LOC_Os06g39230.1",2.0864882,1.467134,2.276813,1.9434785,0.0065971343,862,0.006597134,0.0107454500124657,0.0306973369767981,"Yes"]
["Os01g0846500","Os01g0846500","LOC_Os01g62790.1",1.364728,2.3987608,2.0691228,1.9442039,0.04021302,3302,0.04021302,0.0411618050361505,0.0488474934039975,"Yes"]
["Os11g0131900","Os11g0131900","LOC_Os11g03730.1",1.4984503,1.806139,2.5337906,1.9461266,0.009793577,1209,0.009793577,0.0150710545998504,0.0324913460272952,"Yes"]
["Os02g0296800","Os02g0296800","LOC_Os02g19440.1",2.0089998,1.2059321,2.625039,1.9466571,0.008887336,1123,0.008887336,0.0139990027424582,0.0317427468352626,"Yes"]
["Os07g0576000","Os07g0576000","LOC_Os07g38850.1",1.9311671,1.4211416,2.4918852,1.9480647,0.009351431,1168,0.009351431,0.0145599601096983,0.0321135186138698,"Yes"]
["Os01g0915200","Os01g0915200","LOC_Os01g68660.1",0.89737415,2.2503715,2.698542,1.9487625,0.02399806,2349,0.02399806,0.0292819745699326,0.040977530293742,"Yes"]
["Os01g0208000","Os01g0208000","LOC_Os01g10990.1",2.3704762,1.5439553,1.9334288,1.9492868,0.0035423925,494,3.542393E-3,0.00615806532036898,0.0287622233259109,"Yes"]
["Os01g0589800","Os01g0589800","LOC_Os01g40710.1",2.1780272,1.2333994,2.4433775,1.9516014,0.02895909,2643,0.02895909,0.0329468960359012,0.043948130908059,"Yes"]
["Os08g0239000","Os08g0239000","LOC_Os08g14070.1",1.4948845,2.2247677,2.1374145,1.9523555,0.0016382112,228,0.001638211,0.00284218399401645,0.0288195803552631,"Yes"]
["Os07g0226200","Os07g0226200","LOC_Os07g12390.1",2.0138254,1.3323536,2.5119534,1.9527107,0.01605569,1746,0.01605569,0.0217651458489154,0.0368839476460481,"Yes"]
["GT_Os_A_Specific_0019250","Os05g0535900","LOC_Os05g45930.1",1.7079849,1.4989471,2.65162,1.9528507,0.0053124023,3352,0.041235797,0.0417850909997506,0.049342715324284,"Yes"]
["Os12g0242800","Os12g0242800","LOC_Os12g13940.1",2.0830803,1.6635728,2.1119728,1.9528753,0.0027756535,394,0.002775654,0.00491149339316878,0.0282567213045685,"Yes"]
["Os03g0128300","Os03g0128300","LOC_Os03g03630.1",1.0254779,2.5190082,2.3169923,1.9538261,0.01646806,1779,0.01646806,0.0221765145848915,0.0371295045868465,"Yes"]
["Os05g0500400","Os05g0500400","LOC_Os05g42100.1",1.3732367,1.5398674,2.9587579,1.9572873,0.027859284,2585,0.027859284,0.0322238843181251,0.043227693664990297,"Yes"]
["Os11g0214800","Os11g0214700","LOC_Os11g10820.1",2.3157601,1.9257903,1.6307511,1.9574338,0.0014557994,211,1.455799E-3,2.63026676639242E-3,0.027673980042654,"Yes"]
["Os02g0753300","Os02g0753300","LOC_Os02g51710.1",1.6499109,2.0310917,2.1986742,1.9598923,0.0016668983,233,1.666898E-3,0.00290451259037646,0.0286949694334763,"Yes"]
["Os01g0616300","Os01g0616300","LOC_Os01g42960.1",2.117289,1.3479099,2.4206805,1.9619598,0.034762695,3006,0.034762695,0.037471952131638,0.0463849533083832,"Yes"]
["Os03g0607800","Os03g0607800","LOC_Os03g41120.1",2.1432705,1.4629893,2.2855887,1.9639496,0.0025369797,355,0.00253698,0.0044253303415607,0.0286643007887323,"Yes"]
["Os03g0857600","Os03g0857600","LOC_Os03g64050.1",2.6626835,1.3176079,1.9195485,1.9666133,0.0075989356,975,0.007598936,0.0121540762902019,0.031260853636923,"Yes"]
["Os04g0442300","Os04g0442300","LOC_Os04g36070.1",2.1565967,1.6893144,2.0563512,1.9674207,0.0005168495,86,0.00051685,0.00107205185739217,0.0241056436046511,"Yes"]
["Os10g0430600","Os10g0430600","LOC_Os10g29495.1",1.8502259,1.6036949,2.4500852,1.968002,0.004749536,649,0.004749536,0.00809025180752929,0.0293534497627118,"Yes"]
["Os03g0683800","Os03g0683800","LOC_Os03g47940.1",2.6994843,0.77519226,2.4378457,1.9708408,0.033288673,2918,0.033288673,0.0363749688357018,0.0457576653197395,"Yes"]
["osa-miR168b","osa-miR168b","No hit",2.2727895,1.2438002,2.397606,1.9713985,0.01973141,2029,0.01973141,0.025292944402892,0.0390057592459339,"Yes"]
["Os12g0104400","Os12g0104400","LOC_Os12g01370.1",2.5314403,1.4761333,1.9100642,1.972546,0.015172601,1670,0.015172601,0.0208177511842433,0.036441498569461,"Yes"]
["Os03g0704000","Os03g0704000","LOC_Os03g49710.1",2.066618,1.2365141,2.6170788,1.9734036,0.015693894,1714,0.015693894,0.0213662428322114,0.0367259094714119,"Yes"]
["Os01g0889800","Os01g0889800","LOC_Os01g66600.1",1.7119117,1.2639546,2.9443593,1.9734086,0.015784713,1725,0.015784713,0.0215033657442034,0.0367028891843478,"Yes"]
["GT_Os_A_Specific_0221919","Os08g0476600","LOC_Os08g37150.1",1.6196737,1.9372921,2.36724,1.9747353,1.1899635E-3,180,1.189964E-3,0.00224382946896035,0.0265163644666666,"Yes"]
["Os04g0507700","Os04g0507700","LOC_Os04g42860.1",2.6363063,1.6300526,1.6644754,1.9769448,0.031613104,2821,0.031613104,0.0351657940663176,0.0449486565558312,"Yes"]
["Os11g0461000","Os11g0461000","LOC_Os11g27329.1",2.5290303,1.2486157,2.1531906,1.9769455,0.012909718,1480,0.012909718,0.0184492645225629,0.0349870803364864,"Yes"]
["GT_Os_A_Specific_0005112","Os10g0128502","None",2.4873648,1.3077307,2.1361132,1.9770695,0.034841835,3009,0.034841835,0.037509349289454,0.0464442007926221,"Yes"]
["Os01g0833000","Os01g0833000","LOC_Os01g61630.1",1.8130131,1.3474832,2.770894,1.97713,0.020113427,2064,0.020113427,0.0257292445774121,0.0390867033415697,"Yes"]
["Os10g0435400","Os10g0435400","LOC_Os10g29850.1",1.759345,1.9312792,2.2443314,1.9783186,0.013165738,1506,0.013165738,0.018773373223635,0.0350649237171314,"Yes"]
["Os07g0469200","Os07g0469200","LOC_Os07g28614.1",1.2861085,2.2597156,2.3892388,1.9783543,0.014793846,1647,0.014793846,0.0205310396409872,0.0360280001857923,"Yes"]
["GT_Os_A_Specific_0000166","Os01g0924000","LOC_Os01g69950.1",2.008607,1.3239679,2.6026192,1.978398,0.020000333,2046,0.01983877,0.025504861630516,0.0388921341495601,"Yes"]
["Os10g0550700","Os10g0550775","LOC_Os10g40324.1",1.3537312,1.6350622,2.9500108,1.9796014,0.03869946,3208,0.03869946,0.0399900274245824,0.0483863884226932,"Yes"]
["Os02g0328300","Os02g0328300","LOC_Os02g22260.1",2.223237,1.2631884,2.462717,1.9830475,0.010834659,1310,0.010834659,0.0163300922463226,0.0331739062969465,"Yes"]
["Os02g0137200","Os02g0137200","LOC_Os02g04460.1",2.1109877,1.1611757,2.6834087,1.9851907,0.019441992,2002,0.019441992,0.0249563699825479,0.0389519629930069,"Yes"]
["GT_Os_A_Specific_0000885","Os10g0506900","LOC_Os10g36260.1",2.2985468,1.4138198,2.2462926,1.9862198,0.013957526,1576,0.013957526,0.0196459735726751,0.0355226121738578,"Yes"]
["Os03g0781000","Os03g0781000","LOC_Os03g56840.1",2.239161,1.1203713,2.5995183,1.9863502,0.029601172,2681,0.029601172,0.0334205933682373,0.0442858265169712,"Yes"]
["Os07g0475700","Os07g0475700","LOC_Os07g29310.1",2.2782393,1.8630075,1.8189249,1.9867239,0.0039603733,553,0.003960373,0.0068935427574171,0.0287252370759493,"Yes"]
["Os03g0843500","Os03g0843500","LOC_Os03g62640.2",1.8080273,1.729063,2.4239783,1.9870229,0.013726765,1557,0.013726765,0.0194091249065071,0.0353616277552986,"Yes"]
["GT_Os_A_Specific_0076262","Os01g0367100","LOC_Os01g26920.1",2.020825,1.5230403,2.4191313,1.9876655,0.010488019,1198,0.009717418,0.0149339316878583,0.0325346941552587,"Yes"]
["Os01g0544200","Os01g0544200","LOC_Os01g36350.1",1.4988441,1.8838396,2.5896068,1.9907635,0.012491317,1442,0.012491317,0.0179755671902268,0.0347452652475728,"Yes"]
["Os07g0571600","Os07g0571600","LOC_Os07g38390.1",1.7068882,1.4160333,2.8498116,1.990911,0.010971813,1327,0.010971813,0.0165420094739466,0.0331634830015071,"Yes"]
["Os02g0609700","Os02g0609700","None",2.0636578,1.3062234,2.6044192,1.9914335,0.033107065,2913,0.033107065,0.0363126402393418,0.0455861440834191,"Yes"]
["Os02g0775400","Os02g0775400","LOC_Os02g53520.1",2.6278658,1.3430357,2.0056686,1.99219,0.013724754,1556,0.013724754,0.0193966591872351,0.0353791698547557,"Yes"]
["Os01g0603300","Os01g0603300","LOC_Os01g41900.1",2.4281273,1.1708488,2.378748,1.9925747,0.008619573,1090,0.008619573,0.0135876340064821,0.0317184470669724,"Yes"]
["Os11g0530700","Os11g0530700","None",1.9617071,1.9992352,2.017496,1.9928128,1.1341736E-3,166,0.001134174,0.00206930939915233,0.0274046500843373,"Yes"]
["Os01g0510600","Os01g0510600","LOC_Os01g32730.1",2.25881,0.95253944,2.7673883,1.9929127,0.03203716,2852,0.03203716,0.0355522313637496,0.0450564687096774,"Yes"]
["Os05g0481000","Os05g0481000","LOC_Os05g40260.1",2.2306924,1.3822856,2.366918,1.9932986,0.0052544675,714,5.254468E-3,0.00890052356020942,0.0295177467058823,"Yes"]
["Os06g0308000","Os06g0308000","LOC_Os06g20320.1",1.4255581,1.4545746,3.099945,1.9933592,0.022134122,2211,0.022134122,0.0275617053103964,0.0401537599918588,"Yes"]
["Os05g0449200","Os05g0449200","LOC_Os05g37660.1",2.1505423,1.1480141,2.6836452,1.9940672,0.021560123,2167,0.021560123,0.0270132136624283,0.0399066236054453,"Yes"]
["Os07g0413700","Os07g0413700","LOC_Os07g23110.1",2.253552,1.7299647,1.9997663,1.9944277,0.002768912,393,0.002768912,0.00489902767389678,0.0282598117862595,"Yes"]
["GT_Os_A_Specific_0062663","Os02g0174100","LOC_Os02g07780.1",1.6034188,2.537459,1.8438287,1.9949021,0.03611998,3074,0.03611998,0.0383196210421341,0.0471298763109954,"Yes"]
["Os11g0649300","Os11g0649300","LOC_Os11g42930.1",1.6485372,1.8341312,2.504259,1.9956425,0.039689492,3271,0.039689492,0.0407753677387185,0.0486684660385203,"Yes"]
["GT_Os_A_Specific_0009433","Os01g0862200","LOC_Os01g64270.1",2.3760424,1.0699368,2.5413637,1.995781,0.027950194,3063,0.035927482,0.0381824981301421,0.0470470552732615,"Yes"]
["Os03g0837900","Os03g0837900","LOC_Os03g62170.1",1.5592737,1.9039154,2.5266876,1.9966255,0.010357359,1260,0.010357359,0.0157068062827225,0.0329709261499999,"Yes"]
["Os06g0526800","Os06g0526800","LOC_Os06g33549.1",1.6078339,1.704124,2.681779,1.9979123,0.03637447,3082,0.03637447,0.0384193467963101,0.0473387408079169,"Yes"]
["Os02g0595200","Os02g0595200","LOC_Os02g38170.1",2.2401023,1.2068982,2.5469832,1.9979945,0.014140909,1597,0.014140909,0.0199077536773871,0.0355160839067,"Yes"]
["Os02g0502400","Os10g0130800","LOC_Os10g04090.1",1.9856186,1.7627954,2.251133,1.999849,0.00058550993,94,0.00058551,0.00117177761156818,0.0249838362765957,"Yes"]
["GT_Os_A_Specific_0011624","Os06g0490700","LOC_Os06g29490.1",2.177456,1.5132589,2.3148274,2.0018475,0.0023491818,678,0.004937728,0.00845175766641735,0.0292112492743362,"Yes"]
["Os06g0726800","Os06g0726800","LOC_Os06g51110.1",1.1541047,2.711256,2.1437845,2.0030484,0.01556558,1706,0.01556558,0.0212665170780354,0.0365964486400937,"Yes"]
["Os01g0692300","Os01g0692300","LOC_Os01g49740.1",2.3787374,1.6154995,2.0160837,2.0034401,0.005335249,723,0.005335249,0.00901271503365744,0.0295984560705394,"Yes"]
["GT_Os_A_Specific_0079133","Os01g0224166","None",2.0584764,1.5340805,2.421537,2.004698,0.010522872,1280,0.010522872,0.0159561206681625,0.03297440593125,"Yes"]
["GT_Os_A_Specific_0152688","Os09g0520550","None",2.3250904,1.2030287,2.4905148,2.0062113,0.013756161,1560,0.013756161,0.0194465220643231,0.0353692062634615,"Yes"]
["Os10g0183500","Os10g0183500","None",2.8962173,2.2484417,0.87406635,2.0062418,0.031009996,2782,0.031009996,0.0346796310147095,0.0447092357857656,"Yes"]
["Os05g0389000","Os05g0389000","LOC_Os05g32270.1",1.5222473,1.7694149,2.731842,2.0078347,0.023940856,2344,0.023940856,0.0292196459735726,0.0409670535051194,"Yes"]
["Os03g0132200","Os03g0132200","LOC_Os03g04020.1",1.6388912,2.1930819,2.1976967,2.0098898,0.0020323568,286,0.002032357,0.00356519571179257,0.0285027410034965,"Yes"]
["Os06g0703500","Os06g0703500","LOC_Os06g49010.1",1.407237,2.026207,2.6016932,2.0117123,0.006588631,860,0.006588631,0.0107205185739217,0.0307290685360465,"Yes"]
["Os06g0179800","Os06g0179800","LOC_Os06g08154.1",2.172811,1.6567101,2.208469,2.0126634,0.001099345,161,0.001099345,0.00200698080279232,0.0273880297826086,"Yes"]
["Os03g0684700","Os03g0684700","LOC_Os03g48030.1",1.4035225,2.2087746,2.4341807,2.0154927,0.022369212,2227,0.022369212,0.0277611568187484,0.0402886885190839,"Yes"]
["Os05g0128900","Os05g0128900","LOC_Os05g03810.1",1.5357251,2.967218,1.5451379,2.016027,0.021999,2204,0.021999,0.0274744452754924,0.0400353852087114,"Yes"]
["Os04g0416400","Os04g0416400","LOC_Os04g33970.1",1.601284,1.7070704,2.7435856,2.0173132,0.010243244,1248,0.010243244,0.0155572176514584,0.0329211952596153,"Yes"]
["Os05g0356700","Os05g0356700","LOC_Os05g28830.1",1.7010756,1.6482768,2.7056837,2.0183454,0.0047577834,652,0.004757783,0.0081276489653453,0.0292691221058282,"Yes"]
["Os08g0122900","Os08g0122900","LOC_Os08g02909.1",2.3321567,1.2204461,2.5031285,2.018577,0.02593275,2463,0.02593275,0.0307030665669409,0.0422315307551766,"Yes"]
["Os11g0528500","Os11g0528500","LOC_Os11g32500.1",2.6146011,1.1684942,2.272705,2.0186002,0.015965022,1738,0.015965022,0.0216654200947394,0.0368444782750287,"Yes"]
["Os03g0278900","Os03g0278900","LOC_Os03g17070.1",1.9669161,1.5916643,2.4984388,2.0190065,0.03536565,3034,0.03536565,0.037820992271254,0.0467539954350692,"Yes"]
["GT_Os_A_Specific_0074181","Os10g0499600","LOC_Os10g35644.1",2.7324386,1.817615,1.5111542,2.0204027,0.006592109,1752,0.016132614,0.0218399401645474,0.0369337412979452,"Yes"]
["Os12g0277500","Os12g0277500","LOC_Os12g17910.1",1.4234295,1.4733257,3.166525,2.0210934,0.031771313,2838,0.031771313,0.0353777112939416,0.0449030079080338,"Yes"]
["Os05g0129200","Os05g0129200","LOC_Os05g03840.1",1.6606145,1.6433582,2.7700253,2.024666,0.007352202,951,0.007352202,0.0118548990276738,0.0310091295709779,"Yes"]
["Os06g0729500","Os06g0729500","LOC_Os06g51330.1",1.5387726,2.4640284,2.0744677,2.0257561,0.0039342716,546,0.003934272,0.00680628272251309,0.0289017673846153,"Yes"]
["GT_Os_A_Specific_0041122","Os12g0488300","None",2.1182213,1.3187075,2.6408892,2.0259392,0.00795921,1016,0.00795921,0.012665170780354,0.0314216449901574,"Yes"]
["Os07g0130500","Os07g0130500","LOC_Os07g03849.1",2.7940817,1.2190294,2.067213,2.0267746,0.014003797,1579,0.014003797,0.0196833707304911,0.0355726597637745,"Yes"]
["Os07g0516700","Os07g0516700","LOC_Os07g33320.1",2.3301442,1.845582,1.9046178,2.0267813,0.038516145,3197,0.038516145,0.0398529045125903,0.0483228832014388,"Yes"]
["Os06g0683200","Os06g0683200","LOC_Os06g46930.1",1.7967777,1.4139376,2.874467,2.028394,0.023580056,1430,0.012247678,0.0178259785589628,0.0343534520685314,"Yes"]
["Os05g0132100","Os05g0132100","LOC_Os05g04170.1",1.8093171,1.3952613,2.8835878,2.0293887,0.01849358,1939,0.01849358,0.0241710296684118,0.0382556727075812,"Yes"]
["Os03g0169700","Os03g0169700","None",1.9737511,1.0773616,3.037856,2.0296562,0.024243515,2358,0.024243515,0.0293941660433807,0.0412386508333333,"Yes"]
["Os12g0538800","Os12g0538800","LOC_Os12g35350.1",1.677608,2.6594186,1.7547722,2.0305996,0.028143303,2597,0.028143303,0.0323734729493891,0.0434666108328841,"Yes"]
["Os05g0141100","Os05g0141100","None",2.321588,1.2598505,2.5111036,2.0308473,0.039860677,3286,0.039860677,0.0409623535277985,0.0486552572875836,"Yes"]
["Os06g0256800","Os06g0256800","LOC_Os06g14530.1",2.2422242,2.0801659,1.7705398,2.0309765,0.0032031615,446,0.003203162,5.55971079531289E-3,0.0288069120672645,"Yes"]
["Os01g0367400","Os01g0367400","LOC_Os01g26970.1",2.079021,1.3264165,2.6888804,2.0314393,0.013306501,1520,0.013306501,0.018947893293443,0.0351134049414473,"Yes"]
["Os07g0534200","Os07g0534200","LOC_Os07g34964.1",1.7980924,1.9224963,2.3763237,2.032304,3.6400063E-3,505,0.003640006,0.006295188232361,0.0289110179524752,"Yes"]
["Os03g0454300","Os03g0454300","LOC_Os03g34310.1",1.1785288,2.1500726,2.7690783,2.0325599,0.016394788,1776,0.016394788,0.0221391174270755,0.0370267424932432,"Yes"]
["Os02g0532900","Os02g0532900","LOC_Os02g33000.1",2.1611876,0.93936205,3.0032268,2.0345922,0.024768136,2388,0.024768136,0.0297681376215407,0.0416017560703517,"Yes"]
["Os03g0239000","Os03g0239000","LOC_Os03g13570.1",1.6764479,2.3047843,2.1253982,2.0355434,0.028759854,2630,0.028759854,0.0327848416853652,0.0438615111764258,"Yes"]
["Os11g0525600","Os11g0525600","LOC_Os11g32260.1",2.0137148,1.8860779,2.2107763,2.0368564,2.9994546e-05,10,2.99945e-05,1.24657192720019E-4,0.01203079395,"Yes"]
["GT_Os_A_Specific_0215891","Os01g0102600","LOC_Os01g01302.1",2.3986092,1.1034164,2.6092095,2.0370784,0.027942777,2594,0.027942777,0.0323360757915731,0.0432068151684656,"Yes"]
["Os02g0556800","Os02g0556800","LOC_Os02g35090.1",2.3942642,1.2113943,2.5088072,2.0381553,0.011706616,1386,0.011706616,0.0172774869109947,0.0338782372121212,"Yes"]
["Os07g0245100","Os07g0245100","LOC_Os07g14150.1",2.305169,1.6788979,2.1314898,2.038519,0.002156777,301,0.002156777,0.0037521815008726,0.0287403074651162,"Yes"]
["Os02g0639800","Os02g0639800","LOC_Os02g42690.1",1.2910323,2.3649454,2.4604383,2.0388052,0.009474505,1184,0.009474505,0.0147594116180503,0.0320964861106418,"Yes"]
["Os09g0316000","Os09g0316000","LOC_Os09g14700.1",1.3423643,2.5920463,2.1844702,2.0396268,0.019279469,1990,0.019279469,0.0248067813512839,0.0388592714366834,"Yes"]
["Os02g0663300","Os02g0663300","LOC_Os02g44380.2",2.2757258,1.1874566,2.6682968,2.0438263,0.013398637,1526,0.013398637,0.019022687609075,0.035217518353211,"Yes"]
["Os01g0278900","Os01g0278900","LOC_Os01g17150.1",2.4907665,0.963068,2.682374,2.0454028,0.03687919,3120,0.03687919,0.0388930441286462,0.0474110356057692,"Yes"]
["Os08g0237000","Os08g0237000","LOC_Os08g13920.1",1.8363543,1.6374607,2.6667986,2.0468712,0.018891873,1967,0.018891873,0.0245200698080279,0.0385232855124555,"Yes"]
["GT_Os_A_Specific_0039256","Os03g0686500","LOC_Os03g48150.1",2.2128015,1.7666783,2.1629968,2.0474923,0.0035771432,1007,0.007869903,0.012552979306906,0.0313467536573982,"Yes"]
["GT_Os_A_Specific_0045533","Os10g0214132","None",2.7520561,1.2836866,2.1115074,2.0490835,0.014517401,1628,0.014517401,0.0202941909748192,0.0357673804735872,"Yes"]
["Os01g0308600","Os01g0308600","LOC_Os01g20730.1",1.3894105,2.971109,1.7868176,2.0491123,0.02915969,2652,0.02915969,0.0330590875093492,0.0441023818212669,"Yes"]
["Os04g0569900","Os04g0569900","LOC_Os04g48160.1",2.021284,1.4848633,2.6463194,2.0508223,0.015574525,1707,0.015574525,0.0212789827973074,0.0365960279876977,"Yes"]
["Os04g0173300","Os04g0173300","LOC_Os04g09350.1",2.2014213,1.2363653,2.7169828,2.0515897,0.01027977,1251,0.01027977,0.0155946148092744,0.0329593584892086,"Yes"]
["Os02g0577900","Os02g0577900","LOC_Os02g36820.1",1.9696374,1.4241381,2.7637153,2.052497,0.016579945,1792,0.016579945,0.0223385689354275,0.0371105800195312,"Yes"]
["GT_Os_A_Specific_0028057","Os01g0944000","LOC_Os01g71620.1",2.480741,1.5909286,2.0888143,2.0534947,0.011216775,1340,0.011216775,0.0167040638244826,0.0335749884514925,"Yes"]
["Os11g0529800","Os11g0529800","LOC_Os11g32610.1",1.9912024,1.3983126,2.771995,2.0538366,0.026810914,2512,0.026810914,0.031313886811269,0.042809942696656,"Yes"]
["Os02g0510600","Os02g0510600","LOC_Os02g30650.1",1.0011263,2.4368663,2.7262073,2.0547333,0.038718686,3209,0.038718686,0.0400024931438544,0.0483953410863197,"Yes"]
["Os02g0831200","Os02g0831200","LOC_Os02g58450.1",1.543798,1.4795232,3.144133,2.055818,0.024213921,2356,0.024213921,0.0293692346048367,0.0412232755224957,"Yes"]
["GT_Os_A_Specific_0186689","Os11g0610900","LOC_Os11g39670.1",2.632649,0.88283443,2.652484,2.055989,0.035491273,2149,0.021355134,0.0267888307155322,0.0398582794201954,"Yes"]
["Os07g0556200","Os07g0556200","LOC_Os07g37030.1",2.4778986,1.2515755,2.4468603,2.058778,0.024105119,2351,0.024105119,0.0293069060084766,0.0411253221220757,"Yes"]
["GT_Os_A_Specific_0072850","Os02g0287800","LOC_Os02g18614.1",1.962636,1.5282154,2.6855965,2.058816,0.010966833,1326,0.010966833,0.0165295437546746,0.0331734292330316,"Yes"]
["Os04g0649700","Os04g0649700","LOC_Os04g55620.1",2.1761103,1.1058369,2.8965986,2.0595152,0.03049675,2742,0.03049675,0.0341810022438294,0.0446106725929978,"Yes"]
["Os05g0272200","Os05g0272200","LOC_Os05g19000.1",2.337995,1.5793099,2.2638788,2.0603945,0.002789066,397,0.002789066,4.94889055098479E-3,0.0281786995617128,"Yes"]
["Os08g0106100","Os08g0106100","LOC_Os08g01514.1",2.2642603,1.2924256,2.625237,2.060641,0.010296324,1252,0.010296324,0.0156070805285464,0.0329860667444089,"Yes"]
["GT_Os_A_Specific_0014352","Os04g0391900","LOC_Os04g32150.1",2.145978,1.6302748,2.4074283,2.061227,0.0012714206,2996,0.034577638,0.0373472949389179,0.0462920247056074,"Yes"]
["GT_Os_A_Specific_0048021","Os09g0535000","LOC_Os09g36450.1",2.1280499,1.6616573,2.3947325,2.0614798,0.003577753,534,0.003874586,0.00665669409124906,0.0291029296741573,"Yes"]
["Os08g0505200","Os08g0505200","LOC_Os08g39490.1",1.6198726,1.8742805,2.6946087,2.0629206,0.041537147,3361,0.041537147,0.0418972824731987,0.049570216190717,"Yes"]
["Os06g0621900","Os06g0621900","LOC_Os06g41700.1",1.4841528,3.0817113,1.6245308,2.0634649,0.023644226,2314,0.023644226,0.0288456743954126,0.0409840062601555,"Yes"]
["Os12g0142600","Os12g0142600","LOC_Os12g04860.1",1.7979822,1.9394441,2.4548206,2.0640824,2.8160473E-3,399,0.002816047,0.00497382198952879,0.0283086829999999,"Yes"]
["GT_Os_A_Specific_0429378","Os05g0349700","LOC_Os05g28200.1",1.5929828,1.5121632,3.0872521,2.0641327,0.02425339,2360,0.02425339,0.0294190974819247,0.0412204861398305,"Yes"]
["Os08g0463500","Os08g0463500","LOC_Os08g36110.1",2.1618962,1.2241516,2.8137374,2.066595,0.013198291,1509,0.013198291,0.018810770381451,0.035081739695825,"Yes"]
["Os12g0106600","Os12g0106600","LOC_Os12g01580.1",2.3768334,1.4041696,2.4197526,2.0669186,0.019654967,2021,0.019654967,0.025193218648716,0.0390084476185056,"Yes"]
["Os04g0469800","Os04g0469800","LOC_Os04g39430.1",2.6226416,1.4318285,2.1509876,2.068486,0.033119995,2914,0.033119995,0.0363251059586138,0.045588297853466,"Yes"]
["GT_Os_A_Specific_0087132","Os07g0533000","LOC_Os07g34870.1",1.8027091,1.9004092,2.502411,2.0685098,0.0009563478,135,0.000956348,1.68287210172026E-3,0.0284141616888888,"Yes"]
["Os04g0430400","Os04g0430400","LOC_Os04g35114.1",1.9547257,2.0212445,2.2317162,2.069229,4.729418E-3,647,4.729418E-3,0.00806532036898529,0.0293194676939721,"Yes"]
["GT_Os_A_Specific_0014883","Os04g0685900","LOC_Os04g58910.1",1.365098,2.4152675,2.4336948,2.0713534,0.018462105,2738,0.030428085,0.0341311393667414,0.0445752552720964,"Yes"]
["Os04g0259200","Os04g0259200","None",1.9472833,1.7499518,2.5207353,2.0726569,2.5715102E-3,361,0.00257151,0.00450012465719272,0.0285715418559556,"Yes"]
["GT_Os_A_Specific_0278125","Os01g0604000","None",2.3232737,1.4030533,2.4927993,2.0730422,0.0060688383,805,6.068838E-3,0.0100349040139616,0.0302386449913043,"Yes"]
["Os07g0548300","Os07g0548300","LOC_Os07g36390.1",1.4848185,1.881547,2.8534632,2.0732763,0.017029898,1827,0.017029898,0.0227748691099476,0.0373874772183908,"Yes"]
["GT_Os_A_Specific_0007431","Os03g0673600","LOC_Os03g47050.1",2.6520805,1.23911,2.3400269,2.0770724,0.016911827,1744,0.016040118,0.0217402144103714,0.0368904319369266,"Yes"]
["Os04g0445700","Os04g0445700","LOC_Os04g36800.1",1.5852747,1.5057802,3.1507878,2.0806143,0.032781992,2898,0.032781992,0.0361256544502617,0.0453721773333333,"Yes"]
["Os10g0542400","Os10g0542400","LOC_Os10g39640.1",1.7640686,2.616373,1.8623486,2.08093,0.015605843,1710,0.015605843,0.0213163799551234,0.0366052843701754,"Yes"]
["Os12g0289600","Os12g0289600","LOC_Os12g19180.1",2.264902,1.7196198,2.2631183,2.0825467,0.007310318,946,0.007310318,0.0117925704313138,0.0309954392156448,"Yes"]
["Os11g0701000","Os11g0701000","LOC_Os11g47510.1",2.4867322,1.7621326,2.0045376,2.0844676,0.032181244,2871,0.032181244,0.0357890800299177,0.0449595854002089,"Yes"]
["Os10g0437600","Os10g0437600","LOC_Os10g30156.1",2.3315115,1.5353842,2.3887672,2.085221,0.003077751,425,0.003077751,0.00529793069060084,0.0290467276729411,"Yes"]
["Os08g0405700","Os08g0405700","LOC_Os08g31340.1",1.0583138,2.6745734,2.5244098,2.0857656,0.01874821,1957,0.01874821,0.0243954126153079,0.0384256874348492,"Yes"]
["Os02g0590000","Os02g0590000","LOC_Os02g37760.1",1.4964857,2.3624885,2.3986669,2.0858803,0.017186726,1843,0.017186726,0.0229743206182996,0.0374042094335322,"Yes"]
["Os01g0354700","Os01g0354700","LOC_Os01g25240.1",2.4806767,1.1466465,2.6356697,2.0876644,0.023798127,2330,0.023798127,0.0290451259037646,0.0409675053206008,"Yes"]
["Os03g0815400","Os03g0815400","LOC_Os03g60100.1",2.6106539,0.99319744,2.6602182,2.0880232,0.021594882,2170,0.021594882,0.0270506108202443,0.0399157012451612,"Yes"]
["Os01g0926600","Os01g0926600","LOC_Os01g70190.1",1.978219,1.9188948,2.3698845,2.0889995,1.7106062E-3,245,0.001710606,0.00305410122164048,0.0280050639428571,"Yes"]
["Os10g0501900","Os10g0501900","LOC_Os10g35800.1",0.79573154,3.1446314,2.34063,2.0936644,0.0422061,3394,0.0422061,0.0423086512091747,0.0498788058632881,"Yes"]
["GT_Os_A_Specific_0063613","Os09g0481200","LOC_Os09g30340.1",2.7316875,1.3314838,2.22721,2.096794,0.036547445,3099,0.036547445,0.0386312640239341,0.0473029370425943,"Yes"]
["Os06g0640800","Os06g0640800","LOC_Os06g43370.1",1.048284,2.7921052,2.450748,2.0970457,0.020978192,2126,0.020978192,0.0265021191722762,0.0395783293095014,"Yes"]
["Os10g0461400","Os10g0461400","LOC_Os10g32400.1",2.4649715,1.226099,2.6062202,2.099097,0.029334148,2662,0.029334148,0.0331837447020693,0.0441995746160781,"Yes"]
["Os01g0881300","Os01g0881300","LOC_Os01g65880.1",2.2098475,1.6520767,2.4490204,2.1036482,1.3328798E-3,199,1.33288E-3,0.00248067813512839,0.0268652345728643,"Yes"]
["Os09g0532900","Os09g0532900","LOC_Os09g36250.1",1.6425862,1.4530807,3.2217622,2.1058097,0.029875634,2707,0.029875634,0.0337447020693094,0.0442671473860362,"Yes"]
["Os04g0657900","Os04g0657900","None",1.616806,1.6198626,3.0853481,2.107339,0.024798537,2389,0.024798537,0.0297806033408127,0.0416353838036835,"Yes"]
["GT_Os_A_Specific_0005793","Os11g0202350","LOC_Os11g09684.1",2.5086975,1.4252052,2.3921666,2.1086898,0.031046996,2785,0.031046996,0.0347170281725255,0.044714363000359,"Yes"]
["Os05g0406800","Os05g0406800","LOC_Os05g33690.1",1.3169813,1.8158259,3.1939545,2.1089206,0.032627925,2887,0.032627925,0.0359885315382697,0.0453310035244198,"Yes"]
["GT_Os_A_Specific_0632004","Os06g0134466","LOC_Os06g04350.1",2.2015276,2.1648326,1.9646511,2.110337,1.6984892e-05,8,1.69849e-05,9.97257541760159e-05,0.0085158042375,"Yes"]
["Os06g0505700","Os06g0505700","LOC_Os06g30920.1",1.8975406,2.2211494,2.2132702,2.1106534,5.698796e-05,14,5.6988e-05,0.000174520069808027,0.016327062,"Yes"]
["Os11g0521500","Os11g0521500","LOC_Os11g31900.1",1.7030573,1.9430566,2.686111,2.1107416,0.0062325597,821,0.00623256,0.0102343555223136,0.0304492060414129,"Yes"]
["Os01g0258100","Os01g0258100","LOC_Os01g15399.1",2.1256018,2.0623322,2.1466708,2.1115348,1.2674982E-3,192,0.001267498,2.39341810022438E-3,0.02647882540625,"Yes"]
["Os10g0110600","Os10g0110600","LOC_Os10g02210.1",2.3194432,1.5160704,2.5042853,2.1132662,0.0038191632,528,3.819163E-3,0.00658189977561705,0.0290126189261363,"Yes"]
["Os03g0343900","Os03g0343900","LOC_Os03g22370.1",2.8109837,1.2770281,2.2520866,2.1133661,0.042564414,3416,0.042564414,0.0425828970331588,0.0499782975860655,"Yes"]
["Os11g0678200","Os11g0678200","LOC_Os11g45290.1",2.2238364,1.4263315,2.690792,2.1136534,0.004561783,631,0.004561783,0.00786586886063325,0.0289973242678288,"Yes"]
["Os02g0633600","Os02g0633600","None",2.4478369,2.021615,1.871675,2.113709,0.00042944596,68,0.000429446,0.000847668910496135,0.025330998617647,"Yes"]
["Os01g0680600","Os01g0680600","LOC_Os01g48820.1",2.3130116,1.5099096,2.5200248,2.1143153,0.009731618,1200,0.009731618,0.0149588631264023,0.0325279331649999,"Yes"]
["Os03g0265400","Os03g0265400","LOC_Os03g15870.1",1.8322687,1.371664,3.1458426,2.1165917,0.023746656,2322,0.023746656,0.0289454001495886,0.0410197404031007,"Yes"]
["Os02g0581900","Os11g0623700","LOC_Os11g40760.1",1.5804954,1.5248609,3.2659335,2.1237633,0.019714778,2027,0.019714778,0.025268012964348,0.0390113342664035,"Yes"]
["Os07g0558500","Os07g0558500","LOC_Os07g37250.1",2.7367477,1.4456196,2.191905,2.1247575,0.015371366,1689,0.015371366,0.0210545998504113,0.0365035814245115,"Yes"]
["Os09g0481800","Os09g0481800","LOC_Os09g30410.1",2.230342,1.4465208,2.7012339,2.126032,0.027610006,2569,0.027610006,0.0320244328097731,0.0431077205395095,"Yes"]
["Os01g0104900","Os01g0104900","LOC_Os01g01520.1",0.9992857,2.0802345,3.305811,2.1284437,0.033580616,2941,0.033580616,0.0366616803789578,0.0457979771424685,"Yes"]
["Os04g0591000","Os04g0591000","LOC_Os04g50110.1",2.8018894,0.9179206,2.666707,2.128839,0.027115747,2534,0.027115747,0.031588132635253,0.0429207818535911,"Yes"]
["GT_Os_A_Specific_0013157","Os03g0642450","None",2.496191,1.5890422,2.3051033,2.1301122,0.0015665379,224,0.001566538,2.79232111692844E-3,0.0280508210625,"Yes"]
["Os03g0205800","Os03g0205800","LOC_Os03g10810.1",2.2746592,1.3532219,2.7649813,2.130954,0.02696088,2528,0.02696088,0.031513338319621,0.0427769342088607,"Yes"]
["Os03g0135700","Os03g0135700","LOC_Os03g04310.1",2.6427865,0.9951358,2.7600055,2.1326425,0.04219811,3393,0.04219811,0.0422961854899027,0.0498840610698496,"Yes"]
["Os06g0314300","Os06g0314300","LOC_Os06g20879.1",1.3509064,2.099111,2.9481025,2.1327066,0.013265778,1515,0.013265778,0.018885564697083,0.0351214756158415,"Yes"]
["Os11g0444400","Os11g0444400","None",2.593566,1.4047875,2.4047947,2.1343827,0.014046701,1582,0.014046701,0.0197207678883071,0.0356139808539823,"Yes"]
["Os02g0583000","Os02g0583000","LOC_Os02g37200.1",2.386948,2.1439676,1.8756166,2.1355107,0.038356826,3190,0.038356826,0.0397656444776863,0.0482285984595611,"Yes"]
["GT_Os_A_Specific_0015976","Os05g0539300","LOC_Os05g46190.1",1.5510559,2.4550028,2.401485,2.1358478,0.0129533475,1488,0.012953348,0.0185489902767389,0.0349165852338709,"Yes"]
["Os10g0567400","Os10g0567400","LOC_Os10g41780.1",2.7258825,1.5410595,2.1428528,2.1365983,0.030026304,2719,0.030026304,0.0338942907005734,0.0442940438926075,"Yes"]
["Os03g0115300","Os03g0115300","LOC_Os03g02430.1",2.3260374,1.6490655,2.4386957,2.1379328,0.018851655,1964,0.018851655,0.0244826726502119,0.0384999939943991,"Yes"]
["Os01g0136300","Os01g0136300","LOC_Os01g04390.1",1.7772889,2.7627735,1.8739343,2.1379988,0.005755958,771,0.005755958,0.00961106955871353,0.0299444196342412,"Yes"]
["Os06g0708700","Os06g0708700","LOC_Os06g49500.1",2.245688,1.6928716,2.4785647,2.1390414,0.0024026597,329,2.40266E-3,0.00410122164048865,0.0292920038297872,"Yes"]
["Os01g0540300","Os01g0540300","LOC_Os01g35850.1",2.9423804,1.4903126,1.9898052,2.1408327,0.010452427,1273,0.010452427,0.0158688606332585,0.0329337664548311,"Yes"]
["GT_Os_A_Specific_0035484","Os06g0107700","LOC_Os06g01850.1",2.7838707,1.1724253,2.467123,2.1411397,0.02924987,1156,0.009259597,0.0144103714784343,0.0321282383797577,"Yes"]
["Os03g0106400","Os03g0106400","LOC_Os03g01600.1",2.6466312,1.2037563,2.5848193,2.145069,0.016883302,1818,0.016883302,0.0226626776364996,0.037249133290429,"Yes"]
["Os02g0173700","Os02g0173700","LOC_Os02g07740.1",2.1378622,1.1532841,3.1484504,2.1465323,0.023957374,2347,0.023957374,0.0292570431313886,0.0409429173898593,"Yes"]
["GT_Os_A_Specific_0052598","Os10g0198333","LOC_Os10g12300.1",2.404129,1.6522636,2.386311,2.147568,3.2857803E-3,460,0.00328578,0.00573423086512091,0.028650573,"Yes"]
["Os09g0481100","Os09g0481100","LOC_Os09g30330.1",1.7499461,1.9923773,2.7010489,2.1477907,0.0066005746,863,6.600575E-3,0.0107579157317377,0.0306777593568945,"Yes"]
["Os12g0529900","Os12g0529900","LOC_Os12g34500.1",2.3949103,1.5127482,2.5357137,2.1477907,0.0324382,2880,0.0324382,0.0359012715033657,0.0451769514583333,"Yes"]
["Os04g0430200","Os04g0430200","LOC_Os04g35100.1",1.7782974,2.0392795,2.6281304,2.148569,0.019088896,1976,0.019088896,0.0246322612814759,0.0387477539757085,"Yes"]
["Os11g0134700","Os11g0134700","LOC_Os11g04010.1",3.10352,1.8535495,1.493865,2.1503115,0.012789769,1471,0.012789769,0.0183370730491149,0.0348740744112848,"Yes"]
["Os03g0163200","Os03g0163200","LOC_Os03g06730.1",2.666379,1.6342535,2.1568174,2.1524832,0.005194467,705,0.005194467,0.0087883320867614,0.0295532016127659,"Yes"]
["Os04g0103400","Os04g0103400","None",1.6315255,1.6014891,3.2288399,2.1539514,0.030306285,2730,0.030306285,0.0340314136125654,0.0445269264230769,"Yes"]
["Os02g0732300","Os02g0732300","LOC_Os02g49960.1",2.412479,1.8740602,2.1756048,2.154048,0.007560934,970,0.007560934,0.0120917476938419,0.0312648518288659,"Yes"]
["Os05g0103200","Os05g0103200","LOC_Os05g01270.1",1.8276014,1.708024,2.9289694,2.154865,0.007205848,935,0.007205848,0.0116554475193218,0.0309119319016042,"Yes"]
["Os11g0305300","Os11g0305300","None",2.5737863,1.1290216,2.7658954,2.1562345,0.027657945,2571,0.027657945,0.0320493642483171,0.0431489760385064,"Yes"]
["Os12g0132800","Os12g0132800","LOC_Os12g03860.1",2.3351088,1.22402,2.9110184,2.1567156,0.01446832,1625,0.01446832,0.0202567938170032,0.0357122655507692,"Yes"]
["Os02g0654300","Os02g0654300","LOC_Os02g43740.1",2.449996,1.3246231,2.6957273,2.1567822,0.021193687,2138,0.021193687,0.0266517078035402,0.0397604670519176,"Yes"]
["Os06g0326400","Os06g0326400","LOC_Os06g22060.1",1.1559038,2.7181592,2.5972896,2.1571176,0.030943867,2778,0.030943867,0.0346297681376215,0.0446781319427645,"Yes"]
["Os03g0337600","Os03g0337600","LOC_Os03g21900.1",2.5198364,1.307003,2.6446886,2.157176,0.007655809,984,0.007655809,0.0122662677636499,0.031206758027439,"Yes"]
["Os04g0629600","Os04g0629600","LOC_Os04g53750.1",1.1222138,2.2809253,3.0711503,2.1580966,0.02140347,2156,0.02140347,0.0268760907504363,0.0398187932142857,"Yes"]
["GT_Os_A_Specific_0024921","Os02g0101500","LOC_Os02g01150.1",2.7908716,1.4978724,2.1859236,2.1582224,0.029083785,2646,0.029083785,0.0329842931937172,0.0440873248809523,"Yes"]
["Os12g0418900","Os12g0418900","None",2.2878008,1.2147269,2.9736452,2.1587243,0.027934873,2592,0.027934873,0.0323111443530291,0.0432279226863425,"Yes"]
["Os02g0462300","Os02g0462300","LOC_Os02g26400.2",2.0057845,1.5426245,2.928793,2.1590674,0.007354611,952,0.007354611,0.0118673647469459,0.0309867066397058,"Yes"]
["Os10g0498300","Os10g0498300","LOC_Os10g35530.1",1.9330487,2.0804844,2.4639344,2.1591558,0.012008016,1410,0.012008016,0.0175766641735228,0.034158973174468,"Yes"]
["Os08g0238600","Os08g0238600","None",1.6799283,2.421307,2.3806672,2.1606343,0.014767982,1643,0.014767982,0.0204811767638992,0.0360525720036518,"Yes"]
["Os11g0544800","Os11g0544800","LOC_Os11g34210.1",2.5844254,0.84791374,3.0551763,2.1625051,0.03667714,3110,0.03667714,0.0387683869359262,0.0473028966366559,"Yes"]
["Os03g0412800","Os03g0412800","LOC_Os03g29950.1",1.7851882,1.616179,3.0866632,2.1626768,0.021739766,2185,0.021739766,0.0272375966093243,0.0399076436732265,"Yes"]
["Os09g0563700","Os09g0563700","LOC_Os09g39020.1",2.4960546,2.032505,1.960639,2.1630661,9.492964E-4,134,0.000949296,0.00167040638244826,0.0284151213134328,"Yes"]
["GT_Os_A_Specific_0252199","Os08g0143150","LOC_Os08g04760.1",1.9199896,1.3994565,3.171085,2.1635103,0.036645167,3108,0.036645167,0.0387434554973822,0.0472920736283783,"Yes"]
["Os12g0263000","Os12g0263000","LOC_Os12g16200.1",1.4924154,2.3901448,2.6103654,2.1643085,0.014331393,1610,0.014331393,0.0200698080279232,0.0357038616913043,"Yes"]
["Os10g0378100","Os10g0378100","LOC_Os10g23180.1",1.9334292,2.2296538,2.333899,2.1656606,0.004472044,618,0.004472044,0.00770381451009723,0.0290248680970873,"Yes"]
["Os01g0743400","Os01g0743400","LOC_Os01g54020.1",2.49018,1.4218645,2.585658,2.165901,0.0047521335,650,0.004752134,0.00810271752680129,0.0293243222676923,"Yes"]
["GT_Os_A_Specific_0223218","Os04g0571300","LOC_Os04g48270.1",2.1679072,1.9843607,2.3467894,2.1663525,0.014029712,1581,0.014029712,0.0197083021690351,0.0355934059658444,"Yes"]
["Os04g0645100","Os04g0645100","LOC_Os04g55230.1",2.5553093,1.4487934,2.4969292,2.1670105,0.006028372,802,0.006028372,0.0099975068561456,0.0301493766733167,"Yes"]
["Os08g0377500","Os08g0377500","LOC_Os08g28970.1",2.0064378,2.099224,2.3968606,2.1675074,0.032326676,2876,0.032326676,0.0358514086262777,0.0450842480653685,"Yes"]
["Os07g0601000","Os07g0601000","LOC_Os07g40974.1",2.5555925,1.7088776,2.2388744,2.1677816,0.01832901,1926,0.01832901,0.0240089753178758,0.0381711625700934,"Yes"]
["Os11g0103000","Os11g0103000","LOC_Os11g01210.1",1.9217014,1.5199094,3.0640335,2.168548,0.0344748,2991,0.0344748,0.0372849663425579,0.0462315021063189,"Yes"]
["Os03g0817100","Os03g0817100","LOC_Os03g60250.1",2.6942902,1.6868305,2.1370568,2.172726,0.007872847,1008,0.007872847,0.012565445026178,0.0313273703541666,"Yes"]
["Os02g0553400","Os02g0553400","None",2.6369905,2.6804748,1.206995,2.1748202,0.015207394,1674,0.015207394,0.0208676140613313,0.0364377881326164,"Yes"]
["Os02g0489500","Os02g0489500","LOC_Os02g28820.1",2.5306869,1.3378305,2.6566138,2.1750438,0.0067822295,889,0.00678223,0.0110820244328097,0.0306001400787401,"Yes"]
["Os03g0162500","Os03g0162500","LOC_Os03g06680.1",1.3753281,1.7584524,3.391385,2.1750553,0.023238411,2294,0.023238411,0.0285963600099725,0.0406317639585876,"Yes"]
["GT_Os_A_Specific_0069154","Os03g0284400","LOC_Os03g17580.1",2.1585302,1.3107104,3.0598993,2.17638,0.01545011,1932,0.018389843,0.0240837696335078,0.0381789131847826,"Yes"]
["Os05g0490900","Os05g0490900","LOC_Os05g41190.1",1.720149,1.727623,3.0943756,2.1807158,0.02385842,2334,0.02385842,0.0290949887808526,0.0410009094344473,"Yes"]
["Os01g0743100","Os01g0743100","LOC_Os01g53980.1",1.6145649,1.8130679,3.1159682,2.1812003,0.01067908,1294,0.01067908,0.0161306407379705,0.0331018468933539,"Yes"]
["GT_Os_A_Specific_0169568","Os09g0451000","LOC_Os09g27750.1",2.4443336,1.7713742,2.3279586,2.1812222,0.013308678,3131,0.037001606,0.0390301670406382,0.047401290854679,"Yes"]
["Os01g0878700","Os01g0878700","LOC_Os01g65670.1",3.0788183,1.9953451,1.4706941,2.1816192,0.03813144,3179,0.03813144,0.0396285215656943,0.0481111059578483,"Yes"]
["Os01g0678600","Os01g0678600","LOC_Os01g48690.1",1.3270993,2.1388059,3.0867295,2.1842115,0.02119437,2139,0.02119437,0.0266641735228122,0.0397431594530154,"Yes"]
["Os05g0171200","Os05g0171200","LOC_Os05g07890.1",1.5978961,2.3307528,2.6249433,2.1845307,0.008838085,1116,0.008838085,0.0139117427075542,0.0317648377553763,"Yes"]
["Os03g0126300","Os03g0126300","LOC_Os03g03470.1",1.6173725,1.7637248,3.1846294,2.1885755,0.013518248,1536,0.013518248,0.019147344801795,0.035300581203125,"Yes"]
["Os09g0304500","Os09g0304500","LOC_Os09g13410.1",0.89259434,2.3626518,3.3122768,2.1891744,0.04109429,3344,0.04109429,0.0416853652455746,0.0492910278678229,"Yes"]
["Os04g0477000","Os04g0477000","LOC_Os04g40100.1",1.2962465,2.0360756,3.2403574,2.1908932,0.020674104,2107,0.020674104,0.0262652705061082,0.0393563508039867,"Yes"]
["Os01g0680200","Os01g0680200","LOC_Os01g48800.1",1.3440394,2.1890874,3.0398288,2.1909852,0.039150193,3235,0.039150193,0.0403266018449264,0.0485413984924265,"Yes"]
["Os06g0132300","Os06g0132300","LOC_Os06g04140.1",1.9776263,1.6152825,2.9836984,2.1922023,0.0065505924,853,6.550592E-3,0.0106332585390177,0.0308023734021102,"Yes"]
["Os09g0413200","Os09g0413200","LOC_Os09g24670.1",2.5933962,1.4288445,2.5626745,2.1949718,0.009044885,1133,0.009044885,0.0141236599351782,0.032020329863195,"Yes"]
["GT_Os_A_Specific_0072288","Os06g0329350","LOC_Os06g22394.1",2.637411,1.3787746,2.5750637,2.1970832,0.017723616,1880,0.017723616,0.0234355522313637,0.0378135232851063,"Yes"]
["GT_Os_A_Specific_0039938","Os02g0273800","LOC_Os02g17360.1",2.0975137,1.5612216,2.936749,2.1984947,0.014006064,1348,0.011257385,0.0168037895786586,0.0334965661980712,"Yes"]
["Os06g0160100","Os06g0160100","LOC_Os06g06510.1",1.5557241,2.3067489,2.7451072,2.2025268,0.022321686,2224,0.022321686,0.0277237596609324,0.040257321288669,"Yes"]
["Os07g0618000","Os07g0618000","LOC_Os07g42610.1",2.1448116,2.1741781,2.292365,2.203785,0.0018522752,266,1.852275E-3,0.00331588132635253,0.0279303572368421,"Yes"]
["Os05g0272800","Os05g0272800","LOC_Os05g19030.1",2.1226897,1.2186952,3.274777,2.2053874,0.022425639,2237,0.022425639,0.0278858140114684,0.0402097621944568,"Yes"]
["Os07g0517900","Os07g0517900","LOC_Os07g33420.1",1.8047957,1.4819264,3.3335533,2.2067585,0.020195138,2074,0.020195138,0.0258539017701321,0.0390562673664416,"Yes"]
["Os03g0277000","Os03g0277000","LOC_Os03g16900.1",3.0459385,1.3911848,2.1942916,2.2104716,0.016668199,1799,0.016668199,0.0224258289703315,0.0371629495214007,"Yes"]
["Os05g0585700","Os05g0585700","LOC_Os05g50820.1",2.373847,1.7018776,2.5593066,2.211677,0.022812672,2261,0.022812672,0.0281849912739965,0.040469538873065,"Yes"]
["Os03g0799200","Os03g0799200","LOC_Os03g58490.1",2.3676105,1.9127393,2.3546877,2.2116792,1.1782809E-3,179,1.178281E-3,0.00223136374968835,0.0264027100055865,"Yes"]
["Os02g0588300","Os02g0588300","LOC_Os02g37580.1",2.2854085,1.621573,2.730188,2.2123897,0.00989708,1222,0.00989708,0.0152331089503864,0.032485423797054,"Yes"]
["GT_Os_A_Specific_0047386","Os04g0640600","LOC_Os04g54800.1",1.0642595,2.6853585,2.8954573,2.2150252,0.033311713,2921,0.033311713,0.0364123659935178,0.0457423077175624,"Yes"]
["Os08g0190300","Os08g0190300","LOC_Os08g09110.1",1.8378243,1.9038062,2.9043803,2.215337,0.01882525,1963,0.01882525,0.0244702069309399,0.0384656534640855,"Yes"]
["Os05g0554000","Os05g0554000","LOC_Os05g48040.1",1.6520224,2.4901633,2.5054703,2.2158854,0.017128404,1839,0.017128404,0.0229244577412116,0.0373583623947797,"Yes"]
["Os08g0310300","Os08g0310300","LOC_Os08g21879.1",2.4663258,1.4991002,2.6857028,2.217043,0.004823695,664,0.004823695,0.00827723759660932,0.0291383142243975,"Yes"]
["Os03g0673800","Os03g0673800","LOC_Os03g47070.1",2.3504243,2.1498928,2.1511178,2.217145,0.0068034367,894,0.006803437,0.0111443530291697,0.0305241451979865,"Yes"]
["Os06g0649800","Os06g0649800","LOC_Os06g44050.1",1.08037,2.5942044,2.9802022,2.2182589,0.026325997,2482,0.026325997,0.0309399152331089,0.0425437445475423,"Yes"]
["Os03g0176700","Os03g0176700","LOC_Os03g07960.1",2.9320784,1.101192,2.6268072,2.2200258,0.02374904,2323,0.02374904,0.0289578658688606,0.04100619863969,"Yes"]
["Os01g0700200","Os01g0700200","LOC_Os01g50470.1",2.5211062,1.9047251,2.2393532,2.221728,0.0008827909,127,0.000882791,1.58314634754425E-3,0.0278809031574803,"Yes"]
["Os03g0210900","Os03g0210900","LOC_Os03g11250.1",2.7411795,1.0662022,2.8627367,2.2233727,0.019392176,1997,0.019392176,0.0248940413861879,0.0389494331176765,"Yes"]
["GT_Os_A_Specific_0008248","Os02g0153300","None",1.8027873,2.1069922,2.773113,2.2276309,0.002807942,499,3.600462E-3,0.00622039391672899,0.0289407877394789,"Yes"]
["Os05g0577100","Os05g0577100","LOC_Os05g50160.1",1.6174145,2.701271,2.3658524,2.2281792,0.01730551,1852,0.01730551,0.0230865120917476,0.0374796979535637,"Yes"]
["Os04g0677700","Os04g0677700","LOC_Os04g58130.1",1.7871661,1.8607478,3.0404878,2.2294672,0.019867484,2049,0.019867484,0.025542258788332,0.0388913998653001,"Yes"]
["Os10g0418900","Os10g0418900","LOC_Os10g28299.1",2.4539623,1.942205,2.2923603,2.229509,0.00043162305,70,0.000431623,0.000872600349040139,0.0247319979,"Yes"]
["Os10g0576600","Os10g0576600","LOC_Os10g42610.1",2.040997,2.084216,2.5645447,2.2299192,0.0025335392,352,2.533539E-3,0.0043879331837447,0.0288693890028409,"Yes"]
["Os10g0492300","Os10g0492300","LOC_Os10g35030.1",3.2981777,1.0269537,2.3666716,2.230601,0.038542397,3201,0.038542397,0.0399027673896783,0.0482953934292408,"Yes"]
["GT_Os_A_Specific_0015265","Os03g0735000","LOC_Os03g52460.1",2.6836257,1.139627,2.868957,2.2307365,0.018439727,3222,0.03885979,0.0401645474943904,0.0483757348510242,"Yes"]
["Os07g0552800","Os07g0552800","LOC_Os07g36690.1",1.3598013,2.6835523,2.6491365,2.23083,0.013358808,1524,0.013358808,0.018997756170531,0.035158910031496,"Yes"]
["Os12g0102600","Os12g0102600","LOC_Os12g01210.1",2.059606,1.6749911,2.9744043,2.2363338,0.02378309,2326,0.02378309,0.0289952630266766,0.0410120266509028,"Yes"]
["Os11g0167800","Os11g0167800","LOC_Os11g06720.1",1.0659475,2.7113218,2.9322987,2.2365227,0.04188257,3381,0.04188257,0.0421465968586387,0.0496867755900621,"Yes"]
["Os08g0208200","Os08g0208200","LOC_Os08g10730.1",1.3282146,1.8449259,3.5375886,2.2369096,0.027877891,2587,0.027877891,0.0322488157566691,0.0432231236184769,"Yes"]
["Os11g0157200","Os11g0157200","LOC_Os11g05860.1",2.1364012,2.024374,2.5615797,2.240785,0.010481205,1277,0.010481205,0.0159187235103465,0.0329209970673453,"Yes"]
["Os03g0179700","Os03g0179700","LOC_Os03g08200.1",2.4428468,1.8723011,2.4083939,2.2411807,3.49841E-3,488,3.49841E-3,0.00608327100473697,0.0287543494057377,"Yes"]
["Os03g0713200","Os03g0713200","LOC_Os03g50530.1",2.45965,1.4266944,2.8373928,2.2412457,0.00908879,1138,0.00908879,0.0141859885315382,0.0320343907644991,"Yes"]
["Os02g0834800","Os02g0834800","LOC_Os02g58800.1",2.6286469,1.9708147,2.1300936,2.243185,0.007828447,1002,0.007828447,0.012490650710546,0.0313372264640718,"Yes"]
["Os10g0548000","Os10g0548000","LOC_Os10g40030.1",2.475131,1.3932772,2.8613977,2.2432687,0.010998802,1329,0.010998802,0.0165669409124906,0.0331950299638826,"Yes"]
["Os06g0686600","Os06g0686600","LOC_Os06g47220.1",2.3120694,1.3834,3.041657,2.2457087,0.017919956,1889,0.017919956,0.0235477437048117,0.0380502612578083,"Yes"]
["Os12g0113600","Os12g0113600","None",1.7940698,2.2511933,2.6946793,2.2466476,0.010605882,1290,0.010605882,0.0160807778608825,0.0329768935674418,"Yes"]
["Os04g0488600","Os04g0488600","LOC_Os04g41150.1",2.6680017,1.3748384,2.6977234,2.2468545,0.009799395,1211,0.009799395,0.0150959860383944,0.0324569556936416,"Yes"]
["Os04g0197500","Os04g0197500","None",2.1082811,1.9427762,2.6985545,2.2498705,1.379927E-3,205,1.379927E-3,2.5554724507604E-3,0.0269994497414634,"Yes"]
["Os02g0751600","Os02g0751600","LOC_Os02g51570.1",2.1077633,1.6999898,2.942482,2.2500784,0.007982836,1020,0.007982836,0.012715033657442,0.0313913286235294,"Yes"]
["Os01g0749200","Os01g0749200","LOC_Os01g54540.1",2.033351,1.4603682,3.258029,2.2505827,0.01947449,2006,0.01947449,0.025006232859636,0.0389392718793619,"Yes"]
["GT_Os_A_Specific_0001648","Os03g0738400","LOC_Os03g52840.1",2.411273,2.1327443,2.2089076,2.250975,0.00020384726,1104,0.008718,0.0137621540762902,0.0316738206521739,"Yes"]
["Os03g0211600","Os03g0211600","LOC_Os03g11310.1",1.9765377,1.9897213,2.7917972,2.2526853,0.014064593,1585,0.014064593,0.0197581650461231,0.0355918501722397,"Yes"]
["GT_Os_A_Specific_0015964","Os12g0152750","LOC_Os12g05655.1",2.5066738,1.6444149,2.6079865,2.253025,0.011067567,1336,0.011067567,0.0166542009473946,0.0332275533211077,"Yes"]
["GT_Os_A_Specific_0053374","Os03g0389175","None",2.009139,2.2492075,2.5103989,2.2562485,0.035397246,3036,0.035397246,0.037845923709798,0.0467649386383399,"Yes"]
["Os04g0548700","Os04g0548700","LOC_Os04g46350.1",2.1399379,2.2407098,2.3882842,2.2563107,0.0016672431,234,0.001667243,0.00291697830964846,0.0285782550128205,"Yes"]
["Os03g0120200","Os03g0120200","LOC_Os03g02840.1",1.7076311,2.1175113,2.945835,2.2569926,0.006853347,900,0.006853347,0.0112191473448017,0.03054308313,"Yes"]
["Os03g0117800","Os03g0117800","LOC_Os03g02640.1",2.6780348,1.1231356,2.9734106,2.2581937,0.019825386,2044,0.019825386,0.025479930191972,0.0389039252671232,"Yes"]
["GT_Os_A_Specific_0061516","Os06g0696566","LOC_Os06g48170.1",1.885118,1.9628592,2.9271884,2.2583885,0.006467159,842,0.006467159,0.0104961356270256,0.0308073334311163,"Yes"]
["Os02g0312600","Os02g0312600","LOC_Os02g20850.1",1.8112464,1.9101019,3.0578794,2.2597425,0.008783024,1113,0.008783024,0.0138743455497382,0.0316520298867924,"Yes"]
["GT_Os_A_Specific_0014799","Os12g0482700","LOC_Os12g29760.1",1.6372433,2.015339,3.128868,2.2604835,0.012421615,1202,0.009734586,0.0149837945649463,0.0324837141813643,"Yes"]
["GT_Os_A_Specific_0165976","Os01g0710800","LOC_Os01g51370.1",2.0184598,2.05859,2.7054563,2.2608354,8.540288E-3,461,0.003286954,0.00574669658439291,0.0285986388156182,"Yes"]
["Os04g0564700","Os04g0564700","LOC_Os04g47700.1",1.6679387,2.7434006,2.3779507,2.2630966,5.944464E-3,796,5.944464E-3,0.00992271254051358,0.0299538255075376,"Yes"]
["Os03g0711100","Os03g0711100","LOC_Os03g50310.1",2.1095667,1.8308821,2.8489504,2.263133,0.033289295,2919,0.033289295,0.0363874345549738,0.045742844208633,"Yes"]
["Os04g0544400","Os04g0544400","LOC_Os04g46010.1",2.1440058,1.597043,3.0501413,2.26373,0.0067190113,876,0.006719011,0.0109199700822737,0.0307647866678082,"Yes"]
["GT_Os_A_Specific_0334311","Os02g0102800","LOC_Os02g01270.1",2.25987,1.618197,2.9151835,2.264417,0.025299931,2420,0.025299931,0.0301670406382448,0.0419330674549586,"Yes"]
["Os04g0557000","Os04g0557000","LOC_Os04g47020.1",2.2477946,1.6913924,2.8543553,2.2645142,0.022382174,2231,0.022382174,0.0278110196958364,0.0402397579175257,"Yes"]
["Os02g0537700","Os02g0537700","LOC_Os02g33450.1",2.001052,1.8671207,2.925643,2.2646053,3.626818E-3,501,3.626818E-3,0.006245325355273,0.0290362614730538,"Yes"]
["Os02g0649000","Os02g0649000","None",2.568654,2.2751908,1.9503584,2.2647345,1.5224467E-3,219,0.001522447,2.72999252056843E-3,0.0278837210821917,"Yes"]
["Os01g0861700","Os01g0861700","LOC_Os01g64250.1",1.6724277,2.2524095,2.8711925,2.2653432,0.0059292093,795,0.005929209,0.00991024682124158,0.0299145374830188,"Yes"]
["Os01g0805000","Os01g0805000","LOC_Os01g59060.1",1.7841377,1.6057072,3.4080095,2.2659514,0.025584161,2438,0.025584161,0.0303914235851408,0.0420910868625922,"Yes"]
["Os04g0683600","Os04g0683600","LOC_Os04g58700.1",3.154842,0.933764,2.712235,2.266947,0.030533692,2745,0.030533692,0.0342183994016454,0.0446158974907103,"Yes"]
["GT_Os_A_Specific_0027416","Os01g0262700","LOC_Os01g15790.1",2.6785846,1.6115265,2.5165725,2.2688944,0.03211541,2860,0.03211541,0.0356519571179257,0.0450401781503496,"Yes"]
["Os07g0520600","Os07g0520600","LOC_Os07g33650.1",1.9219499,1.7457242,3.1411834,2.2696192,0.0067482945,881,0.006748295,0.0109822986786337,0.0307235087911464,"Yes"]
["Os10g0137300","Os10g0137300","LOC_Os10g04800.1",1.9388986,1.4012656,3.4700851,2.2700832,0.028946083,2642,0.028946083,0.0329344303166292,0.043945018513626,"Yes"]
["GT_Os_A_Specific_0130543","Os02g0665250","None",2.8829918,1.5716496,2.3558245,2.2701552,0.019804535,2039,0.019804535,0.025417601595612,0.0389583079377145,"Yes"]
["Os08g0490900","Os08g0490900","LOC_Os08g38300.1",2.0912457,2.3406878,2.3787546,2.2702293,0.002870127,402,0.002870127,0.0050112191473448,0.0286370134253731,"Yes"]
["Os12g0428700","Os12g0428700","LOC_Os12g24084.1",2.1359787,1.9226913,2.7610788,2.2732496,0.005437066,741,0.005437066,0.00923709798055347,0.0294305961214574,"Yes"]
["Os01g0524500","Os01g0524500","LOC_Os01g34060.1",2.3020391,1.7224159,2.7967997,2.2737515,0.0031599104,438,0.00315991,0.00545998504113687,0.0289369840410958,"Yes"]
["GT_Os_A_Specific_0064411","Os03g0617500","LOC_Os03g42070.1",2.4166036,1.5033283,2.9044046,2.2747788,0.00872858,1107,0.00872858,0.0137995512341062,0.0316263183197832,"Yes"]
["Os04g0509800","Os02g0581900","LOC_Os02g37109.1",1.7429023,1.640038,3.442576,2.275172,0.023705779,2026,0.019714778,0.025255547245076,0.0390305896140177,"Yes"]
["Os03g0158300","Os03g0158300","LOC_Os03g06230.1",2.2892609,1.4900746,3.0644774,2.281271,0.01638236,1774,0.01638236,0.0221141859885315,0.0370403866741826,"Yes"]
["GT_Os_A_Specific_0007144","Os09g0249750","None",2.3858685,1.8302236,2.6463256,2.2874725,0.005621344,760,0.005621344,0.00947394664672151,0.0296673826105263,"Yes"]
["Os09g0532400","Os09g0532400","LOC_Os09g36220.1",1.5300608,2.6432152,2.6986709,2.290649,0.003792183,526,0.003792183,0.00655696833707305,0.028917197743346,"Yes"]
["Os12g0505800","Os12g0505800","LOC_Os12g32130.1",1.9398999,3.1917176,1.7501154,2.293911,0.011981421,1407,0.011981421,0.0175392670157068,0.0341559912089552,"Yes"]
["Os12g0505800","Os08g0414700","LOC_Os08g31980.1",1.9398999,3.1917176,1.7501154,2.293911,0.011981421,3033,0.035352297,0.037808526551982,0.046751751818991,"Yes"]
["Os01g0292700","Os01g0292700","LOC_Os01g18840.1",2.9070888,1.6805444,2.2959747,2.2945359,0.004462591,616,0.004462591,7.67888307155322E-3,0.0290575527613636,"Yes"]
["Os09g0551600","Os09g0551600","LOC_Os09g37910.1",2.6032944,1.4434204,2.8372116,2.2946422,0.01530707,1681,0.01530707,0.0209548740962353,0.0365238892147531,"Yes"]
["Os03g0808100","Os03g0808100","LOC_Os03g59340.1",2.353313,1.8341093,2.7070775,2.2981665,0.012725423,1467,0.012725423,0.0182872101720269,0.0347932322106339,"Yes"]
["Os01g0763700","Os01g0763700","LOC_Os01g55799.1",1.8169312,1.9480472,3.130135,2.298371,0.023245096,2295,0.023245096,0.0286088257292445,0.0406257429437908,"Yes"]
["Os08g0515800","Os08g0515800","LOC_Os08g40430.1",1.2065825,2.148757,3.5491605,2.3015,0.03076892,2765,0.03076892,0.0344677137870855,0.044634408,"Yes"]
["Os03g0857500","Os03g0857500","LOC_Os03g64030.1",2.6623936,1.5154457,2.7527056,2.3101816,0.006253712,824,0.006253712,0.0102717526801296,0.0304413092621359,"Yes"]
["Os11g0149400","Os11g0149400","LOC_Os11g05190.1",2.6938176,2.7832117,1.4536524,2.3102272,0.01980859,2040,0.01980859,0.025430067314884,0.0389471835735294,"Yes"]
["Os03g0778100","Os03g0778100","LOC_Os03g56670.1",3.1357365,1.2307758,2.5723705,2.3129609,0.0394664,3260,0.0394664,0.0406382448267265,0.0485581995092024,"Yes"]
["GT_Os_A_Specific_0007822","Os09g0565250","None",1.8983283,1.4653668,3.5857494,2.3164816,0.022895835,2269,0.022895835,0.0282847170281725,0.0404738625760246,"Yes"]
["Os01g0585300","Os01g0585300","LOC_Os01g40310.1",2.217226,1.9213085,2.8167334,2.3184226,0.016278904,1764,0.016278904,0.0219895287958115,0.0370151269523809,"Yes"]
["GT_Os_A_Specific_0126854","Os10g0163040","LOC_Os10g07978.1",2.4719133,1.9010038,2.5910072,2.3213081,0.018139912,1908,0.018139912,0.0237845923709798,0.0381337458238993,"Yes"]
["Os01g0127400","Os01g0127400","LOC_Os01g03660.2",2.5712595,1.5091705,2.8854184,2.3219495,0.010908025,1320,0.010908025,0.0164547494390426,0.0331455214204545,"Yes"]
["Os01g0823500","Os01g0823500","LOC_Os01g60810.1",2.541936,1.9134436,2.5124426,2.3226073,7.2502316E-4,110,0.000725023,0.00137122911992021,0.0264369750272727,"Yes"]
["Os06g0704700","Os06g0704700","LOC_Os06g49120.1",2.9994779,1.4969773,2.4749198,2.3237917,0.025377296,2424,0.025377296,0.0302169035153328,0.0419918870693069,"Yes"]
["GT_Os_A_Specific_0066831","Os04g0341900","LOC_Os04g27410.1",2.1335502,1.6732874,3.1667109,2.324516,0.025609257,2440,0.025609257,0.0304163550236848,0.0420978400930327,"Yes"]
["Os02g0590400","Os02g0590400","LOC_Os02g37800.1",1.8466392,2.4044528,2.7250295,2.325374,0.038518883,3198,0.038518883,0.0398653702318623,0.0483112069146341,"Yes"]
["Os02g0125700","Os02g0125700","LOC_Os02g03330.1",2.598751,1.3484478,3.0383148,2.3285046,0.012634135,1449,0.012634135,0.0180628272251308,0.0349727505072463,"Yes"]
["Os03g0401300","Os03g0401300","LOC_Os03g28330.1",2.477387,1.9092536,2.5992346,2.328625,4.2296825E-3,579,0.004229683,0.00721765145848915,0.0293009646165803,"Yes"]
["Os06g0262800","Os06g0262800","LOC_Os06g15170.1",1.3710852,2.180169,3.4362173,2.329157,0.023366317,2300,0.023366317,0.0286711543256045,0.0407488249943478,"Yes"]
["Os01g0207500","Os01g0207500","None",1.8900404,2.3288069,2.7821383,2.3336618,0.009393381,1174,0.009393381,0.0146347544253303,0.0320927182206132,"Yes"]
["GT_Os_A_Specific_0064098","Os02g0224800","LOC_Os02g13150.1",2.158709,2.3784409,2.4656987,2.3342829,0.009468324,1183,0.009468324,0.0147469458987783,0.0321026606627218,"Yes"]
["Os07g0176900","Os07g0176900","LOC_Os07g08030.1",2.845375,1.5312347,2.6267986,2.3344696,0.0073292386,948,0.007329239,0.0118175018698578,0.0310101029841772,"Yes"]
["Os08g0191900","Os08g0191900","LOC_Os08g09270.1",1.1994915,2.1196656,3.6882343,2.335797,0.033806447,2954,0.033806447,0.0368237347294938,0.0459030666611374,"Yes"]
["GT_Os_A_Specific_0157680","Os03g0363500","LOC_Os03g24860.1",3.0878696,1.4277391,2.5011187,2.3389091,0.011763257,1645,0.014780789,0.0205061082024432,0.0360399663702127,"Yes"]
["Os04g0461100","Os04g0461100","LOC_Os04g38750.1",1.9939508,1.757184,3.2777576,2.3429642,0.014450266,1621,0.014450266,0.0202069309399152,0.035755716795805,"Yes"]
["GT_Os_A_Specific_0006534","Os03g0769100","LOC_Os03g55930.1",2.018756,1.591506,3.4210348,2.3437655,0.016983347,3192,0.038377654,0.0397905759162303,0.0482245520657894,"Yes"]
["Os03g0127700","Os03g0127700","LOC_Os03g03570.2",2.9521937,1.5863938,2.4929314,2.3438396,0.040326398,3307,0.040326398,0.0412241336325105,0.0489111528206833,"Yes"]
["Os08g0269700","Os08g0269700","LOC_Os08g16830.1",2.619485,1.3529711,3.0611887,2.3445482,0.03309741,2911,0.03309741,0.0362877088007978,0.0456041606011679,"Yes"]
["Os09g0308600","Os09g0308600","None",1.5406308,2.5257106,2.9674978,2.344613,0.006427196,836,0.006427196,0.0104213413113936,0.0308367023397129,"Yes"]
["Os07g0133700","Os07g0133700","LOC_Os07g04160.1",2.750987,1.3966336,2.8903847,2.3460019,0.018058969,1898,0.018058969,0.0236599351782597,0.0381636062481559,"Yes"]
["Os03g0421800","Os03g0421800","LOC_Os03g30830.1",2.2116785,1.9844098,2.8433723,2.3464868,0.0019369479,274,1.936948E-3,0.00341560708052854,0.0283543738248175,"Yes"]
["Os01g0803300","Os01g0803300","LOC_Os01g58910.1",2.0606027,1.0929942,3.8949862,2.3495276,0.04234755,3401,0.04234755,0.0423959112440787,0.0499429647309614,"Yes"]
["Os05g0217700","Os05g0217700","LOC_Os05g12630.1",2.0101519,2.6035721,2.4434052,2.3523762,0.03816323,149,1.023216E-3,0.00185739217152829,0.0275444253422818,"Yes"]
["Os05g0519600","Os05g0519600","LOC_Os05g44330.1",1.344918,2.723343,2.991835,2.3533654,0.009874311,1217,0.009874311,0.0151707803540264,0.0325438466894001,"Yes"]
["Os07g0459000","Os07g0459000","None",1.6626501,1.8377361,3.5607724,2.3537195,0.028824983,2636,0.028824983,0.0328596360009972,0.0438607764844461,"Yes"]
["GT_Os_A_Specific_0091683","Os07g0631900","LOC_Os07g43810.1",1.7548308,2.1618152,3.148005,2.3548837,0.00954946,1874,0.017660117,0.0233607579157317,0.0377986815832444,"Yes"]
["Os10g0360600","Os10g0360600","None",2.2555099,2.104947,2.7072783,2.3559117,0.036890276,3121,0.036890276,0.0389055098479182,0.0474100919692406,"Yes"]
["Os01g0866400","Os01g0866400","LOC_Os01g64660.1",3.2108202,1.5461798,2.312377,2.356459,0.02863845,2622,0.02863845,0.0326851159311892,0.0438096197368421,"Yes"]
["Os10g0181200","Os10g0181200","LOC_Os10g10170.1",2.703515,1.5818176,2.7888136,2.3580487,0.0131729795,1507,0.01317298,0.018785838942907,0.0350609308427339,"Yes"]
["Os08g0518000","Os08g0518000","LOC_Os08g40615.1",2.8483806,1.3488488,2.8809385,2.3593893,0.028615706,2620,0.028615706,0.0326601844926452,0.043808243040458,"Yes"]
["Os03g0611200","Os03g0611200","LOC_Os03g41510.1",2.6313787,1.4112782,3.0406928,2.3611166,0.0113880085,1358,0.011388009,0.0169284467713787,0.0336357173041237,"Yes"]
["Os12g0541300","Os12g0541300","LOC_Os12g35610.1",2.3519807,1.7408204,2.9916635,2.361488,0.016314505,1767,0.016314505,0.0220269259536275,0.0370330953904923,"Yes"]
["Os01g0761000","Os01g0761000","LOC_Os01g55570.1",2.9262285,1.4209652,2.739316,2.36217,0.015630318,1712,0.015630318,0.0213413113936674,0.0366198630245327,"Yes"]
["Os08g0504500","Os08g0504500","LOC_Os08g39430.1",2.1966448,1.7391438,3.162427,2.366072,0.030082533,2722,0.030082533,0.0339316878583894,0.0443280822421013,"Yes"]
["Os03g0130900","Os03g0130900","LOC_Os03g03880.1",1.3994808,2.4291487,3.285697,2.371442,0.02499004,2403,0.02499004,0.0299551234106207,0.0417124637702871,"Yes"]
["Os07g0100900","Os07g0100900","LOC_Os07g01100.1",1.9210596,1.9826565,3.214149,2.3726218,0.016375713,1772,0.016375713,0.0220892545499875,0.0370671472025959,"Yes"]
["Os05g0275000","Os05g0275000","LOC_Os05g19380.1",2.382297,1.8632622,2.8726153,2.3727248,3.403526E-3,477,3.403526E-3,0.00594614809274495,0.0286195865534591,"Yes"]
["Os05g0579500","Os05g0579500","LOC_Os05g50330.1",3.0633187,1.1811872,2.8788695,2.3744586,0.02287561,2267,0.02287561,0.0282597855896285,0.0404737854918394,"Yes"]
["GT_Os_A_Specific_0033999","Os02g0553200","LOC_Os02g34810.1",3.0949068,1.5047026,2.5240946,2.374568,0.028393047,2909,0.033073932,0.0362627773622538,0.0456031424035751,"Yes"]
["Os02g0122500","Os02g0122500","LOC_Os02g03010.1",1.6877513,2.0864048,3.354292,2.3761494,0.031496387,2815,0.031496387,0.0350909997506856,0.0448781556863232,"Yes"]
["Os05g0186000","Os05g0186000","LOC_Os05g09400.1",2.1533604,1.6044531,3.3712654,2.3763597,0.015480372,1698,0.015480372,0.0211667913238593,0.036567592515901,"Yes"]
["Os01g0566800","Os01g0566701","LOC_Os01g38610.1",2.911449,1.2767148,2.9457488,2.377971,0.021065954,2132,0.021065954,0.0265769134879082,0.0396320551097561,"Yes"]
["Os05g0498300","Os05g0498300","LOC_Os05g41880.1",1.4233427,2.3786774,3.3330908,2.3783703,0.013545653,1540,0.013545653,0.019197207678883,0.03528026895,"Yes"]
["Os01g0117900","Os01g0117900","LOC_Os01g02870.1",1.1398935,3.2157269,2.779562,2.3783941,0.020224737,2078,0.020224737,0.0259037646472201,0.0390382194932627,"Yes"]
["Os12g0189400","Os12g0189400","LOC_Os12g08770.1",3.2309122,1.4463167,2.4612417,2.3794901,0.03852405,3199,0.03852405,0.0398778359511343,0.0483025834792122,"Yes"]
["Os06g0564500","Os06g0564500","LOC_Os06g36840.1",2.13133,1.9354014,3.0729985,2.37991,0.0052112318,709,0.005211232,0.00883819496384941,0.0294813138956276,"Yes"]
["GT_Os_A_Specific_0008244","Os01g0730800","LOC_Os01g53060.1",2.7742887,1.8682456,2.5017204,2.3814182,1.8584372E-3,643,0.004686457,8.01545749189728E-3,0.0292338709595645,"Yes"]
["Os11g0653300","Os11g0653300","LOC_Os11g43250.1",1.880259,1.8381419,3.43067,2.3830235,0.038218945,3185,0.038218945,0.0397033158813263,0.0481306713956043,"Yes"]
["Os03g0603600","Os03g0603600","LOC_Os03g40670.1",1.8870645,2.6227403,2.647468,2.3857577,0.007799247,1001,0.007799247,0.0124781849912739,0.0312515281888111,"Yes"]
["Os08g0297500","Os08g0297500","LOC_Os08g20090.2",2.705988,1.9812737,2.4751081,2.3874567,0.0024545568,338,2.454557E-3,4.21341311393667E-3,0.0291278938668639,"Yes"]
["Os10g0150600","Os10g0150600","LOC_Os10g05980.1",1.3369656,2.8873978,2.9381733,2.3875122,0.024883589,2397,0.024883589,0.0298803290949887,0.0416387465494368,"Yes"]
["Os03g0129400","Os03g0129400","LOC_Os03g03724.1",2.1006675,2.062664,2.9995942,2.387642,0.006569599,858,0.006569599,0.0106955871353777,0.0307117267937062,"Yes"]
["Os09g0266100","Os09g0266100","LOC_Os09g09330.1",2.1573997,1.7485542,3.2602139,2.3887227,0.0068381764,896,0.006838176,0.0111692844677137,0.03061152225,"Yes"]
["GT_Os_A_Specific_0021308","Os09g0442800","LOC_Os09g27070.1",2.7365503,1.9057326,2.5250583,2.3891137,0.009369814,1550,0.013691511,0.019321864871603,0.0354300971748387,"Yes"]
["Os10g0450400","Os10g0450400","LOC_Os10g31290.1",3.0596242,1.6992092,2.409758,2.3895304,0.0057224217,769,0.005722422,0.00958613812016953,0.0298473792483745,"Yes"]
["Os08g0546700","Os08g0546700","LOC_Os08g43320.1",2.444694,1.9037199,2.825481,2.3912983,0.00937071,1171,0.00937071,0.0145973572675143,0.0320972825021349,"Yes"]
["Os10g0522700","Os10g0522700","LOC_Os10g37860.1",2.0653615,2.6076732,2.5038385,2.392291,0.011488602,1366,0.011488602,0.0170281725255547,0.0337341014802342,"Yes"]
["Os05g0319700","Os05g0319700","LOC_Os05g25540.1",1.4286671,2.9066677,2.842226,2.3925202,0.010057485,1235,0.010057485,0.0153951633009224,0.0326644310404858,"Yes"]
["Os12g0468300","Os12g0468300","LOC_Os12g28250.1",2.177641,2.1800742,2.8401384,2.3992846,0.01601969,1741,0.01601969,0.0217028172525554,0.0369069365824238,"Yes"]
["GT_Os_A_Specific_0033395","Os07g0421866","LOC_Os07g23990.1",2.351009,1.7627811,3.0873864,2.4003923,0.027843334,2583,0.027843334,0.0321989528795811,0.0432363966991869,"Yes"]
["Os11g0119700","Os11g0119700","LOC_Os11g02710.1",1.9843307,2.1415029,3.078518,2.4014504,0.007973499,1018,0.007973499,0.012690102218898,0.0314162126611001,"Yes"]
["Os12g0124000","Os12g0124000","LOC_Os12g03070.1",2.3052692,1.6830721,3.2225618,2.4036343,0.015357217,1688,0.015357217,0.0210421341311393,0.0364915861297393,"Yes"]
["Os08g0462700","Os08g0462700","LOC_Os08g36020.1",2.4226537,2.0693889,2.7188864,2.403643,0.029063955,2645,0.029063955,0.0329718274744452,0.0440739219300567,"Yes"]
["GT_Os_A_Specific_0102039","Os08g0160500","LOC_Os08g06380.1",2.592883,1.6008468,3.020641,2.4047902,0.005741357,2038,0.019799786,0.02540513587634,0.0389680773532875,"Yes"]
["Os02g0760200","Os02g0760200","LOC_Os02g52280.1",2.265998,2.3446684,2.6116061,2.4074242,0.022486458,2241,0.022486458,0.0279356768885564,0.0402468465140562,"Yes"]
["Os03g0279200","Os03g0279200","LOC_Os03g17100.1",2.4667988,2.1667118,2.58889,2.407467,0.00032744327,52,0.000327443,0.000648217402144103,0.0252571898653846,"Yes"]
["Os03g0335500","Os03g0335500","LOC_Os03g21730.1",2.056911,2.239307,2.9263296,2.4075158,0.018711023,1953,0.018711023,0.0243455497382198,0.0384280149784946,"Yes"]
["Os04g0620600","Os04g0620600","LOC_Os04g52950.1",2.5787978,1.7403612,2.9172597,2.4121397,0.0046413047,639,0.004641305,0.00796559461480927,0.0291334496948356,"Yes"]
["Os03g0560200","Os03g0560200","LOC_Os03g36150.1",3.1024332,1.9405684,2.2107391,2.4179137,0.0060023325,799,0.006002333,0.00996010969832959,0.0301318619061326,"Yes"]
["Os04g0530900","Os04g0530900","LOC_Os04g44850.1",1.9733825,1.7410326,3.5443516,2.4195888,0.027523076,2560,0.027523076,0.0319122413363251,0.0431230694671875,"Yes"]
["Os01g0111800","Os01g0111800","LOC_Os01g02139.1",1.2698274,2.2825465,3.7080312,2.420135,0.0383601,3191,0.0383601,0.0397781101969583,0.0482175998433093,"Yes"]
["Os02g0554100","Os02g0554100","LOC_Os02g34860.1",1.8692813,2.190764,3.20196,2.4206684,0.038324356,3188,0.038324356,0.0397407130391423,0.0482180024830614,"Yes"]
["Os11g0606200","Os11g0606200","LOC_Os11g39290.1",2.578525,2.217228,2.4743986,2.423384,0.0020031536,282,2.003154E-3,0.00351533283470456,0.0284916691276595,"Yes"]
["Os02g0129300","Os02g0129300","LOC_Os02g03670.1",2.2665987,1.5942731,3.409597,2.4234896,0.014374123,1616,0.014374123,0.0201446023435552,0.0356773560352722,"Yes"]
["Os05g0396700","Os05g0396700","None",1.6496856,1.8862014,3.741303,2.42573,0.022471488,2239,0.022471488,0.0279107454500124,0.0402559796194729,"Yes"]
["GT_Os_A_Specific_0004746","Os02g0617600","LOC_Os02g40454.1",2.7616534,2.308064,2.2144775,2.428065,6.493019E-4,407,0.002906393,0.00507354774370481,0.0286426101302211,"Yes"]
["Os02g0158500","Os02g0158500","LOC_Os02g06380.1",1.0685921,2.4161139,3.8081255,2.4309437,0.03253073,2882,0.03253073,0.0359262029419097,0.0452743782199861,"Yes"]
["Os09g0538700","Os09g0538700","LOC_Os09g36760.1",2.3264399,2.4283457,2.5479512,2.4342456,0.010023112,1232,0.010023112,0.0153577661431064,0.0326320635,"Yes"]
["Os01g0214600","Os01g0214600","LOC_Os01g11620.1",1.7776475,2.0406284,3.49114,2.436472,0.01979032,2035,0.01979032,0.025367738718524,0.0390068665945946,"Yes"]
["Os07g0158800","Os07g0158800","LOC_Os07g06490.1",1.7496223,3.024188,2.5382328,2.4373477,0.026750585,2506,0.026750585,0.031239092495637,0.0428158804608938,"Yes"]
["Os06g0130100","Os06g0130100","LOC_Os06g03970.1",3.6371121,1.0459805,2.6312428,2.4381118,0.035562977,3047,0.035562977,0.03798304662179,0.0468142765825402,"Yes"]
["Os11g0169200","Os11g0169200","LOC_Os11g06820.1",1.98036,2.5158787,2.8230915,2.4397767,0.0060059302,800,0.00600593,0.00997257541760159,0.0301122315375,"Yes"]
["Os05g0332300","Os05g0332300","LOC_Os05g26820.1",1.6243253,2.7330308,2.9667335,2.441363,0.008508793,1078,0.008508793,0.0134380453752181,0.0316593401883116,"Yes"]
["Os04g0577800","Os04g0577800","LOC_Os04g48840.1",2.933279,1.312839,3.0803967,2.4421716,0.013219914,1511,0.013219914,0.018835701819995,0.0350927035433487,"Yes"]
["Os11g0179700","Os11g0179700","LOC_Os11g07770.1",2.503541,2.5199237,2.3063254,2.4432633,0.00070194394,106,0.000701944,0.00132136624283221,0.0265612960754717,"Yes"]
["Os10g0421800","Os10g0421800","LOC_Os10g28600.1",2.1722727,2.4767227,2.6813688,2.4434547,3.585693E-3,498,3.585693E-3,0.00620792819745699,0.0288799490421686,"Yes"]
["Os12g0248900","Os06g0360500","None",2.2470531,1.7593415,3.3283257,2.4449067,0.017112155,2036,0.019791072,0.025380204437796,0.0389891894852652,"Yes"]
["GT_Os_A_Specific_0035555","Os04g0269600","LOC_Os04g20164.1",2.9752107,1.925281,2.4361424,2.4455447,0.011552066,1370,0.011552066,0.0170780354026427,0.0338214136686131,"Yes"]
["Os03g0267300","Os03g0267300","LOC_Os03g16050.1",3.1320834,1.5331693,2.6779313,2.447728,0.012989,1490,0.012989,0.0185739217152829,0.0349656906040268,"Yes"]
["GT_Os_A_Specific_0125966","Os01g0238500","LOC_Os01g13690.1",3.1488938,2.1443229,2.0533795,2.4488654,0.021710569,2181,0.021710569,0.0271877337322363,0.039927139962861,"Yes"]
["Os07g0686600","Os07g0686600","LOC_Os07g48710.1",2.7035508,2.027379,2.6220474,2.4509923,0.0022854297,321,0.00228543,0.00400149588631264,0.0285571954205607,"Yes"]
["GT_Os_A_Specific_0042713","Os06g0729300","LOC_Os06g51310.1",2.3524294,2.4464908,2.5768719,2.4585974,1.5324567E-3,1482,0.012917734,0.0184741959611069,0.0349615594291498,"Yes"]
["Os07g0534000","Os07g0534000","LOC_Os07g34950.1",1.7941203,1.7766008,3.8079605,2.4595606,0.022856243,2265,0.022856243,0.0282348541510845,0.0404752276701986,"Yes"]
["Os01g0798500","Os01g0798500","LOC_Os01g58470.1",2.350676,1.7489014,3.2797532,2.4597769,0.01924009,1986,0.01924009,0.0247569184741959,0.0388580065407855,"Yes"]
["Os01g0101600","Os01g0101600","LOC_Os01g01150.1",2.593874,2.1131506,2.6813812,2.462802,0.021899676,2198,0.021899676,0.0273996509598603,0.0399634214904458,"Yes"]
["Os12g0113500","Os12g0113500","LOC_Os12g02200.1",2.6618757,1.9320908,2.8074427,2.4671364,0.021828037,2192,0.021828037,0.0273248566442283,0.0399417228134124,"Yes"]
["Os08g0393600","Os08g0393600","LOC_Os08g30340.1",1.2518158,2.523881,3.6301332,2.46861,0.02217936,2216,0.02217936,0.0276240339067564,0.0401450419494584,"Yes"]
["Os08g0236700","Os08g0236700","LOC_Os08g13890.1",1.615737,2.484572,3.308883,2.4697306,0.009459732,1182,0.009459732,0.0147344801795063,0.0321006641725888,"Yes"]
["Os01g0295900","Os01g0295900","LOC_Os01g19140.1",2.6525946,2.0831337,2.6829853,2.4729044,4.666766E-4,77,0.000466677,0.000959860383944153,0.0243096291818181,"Yes"]
["Os04g0459000","Os04g0459000","LOC_Os04g38570.1",1.7679925,3.7021027,1.9492254,2.4731069,0.03532334,3031,0.03532334,0.037783595113438,0.0467442813394919,"Yes"]
["Os_A_Specific_0215569","Os04g0175300","LOC_Os04g09580.1",1.5976057,2.2423363,3.5802088,2.4733837,0.0408562,3334,0.0408562,0.0415607080528546,0.0491524349730054,"Yes"]
["Os02g0204400","Os02g0204400","LOC_Os02g10990.1",1.9636087,2.187232,3.2731237,2.474655,0.004040104,556,0.004040104,0.0069309399152331,0.0291454265179856,"Yes"]
["Os09g0479600","Os09g0479600","LOC_Os09g30230.1",1.2885795,2.966691,3.168799,2.4746897,0.023160351,2288,0.023160351,0.0285215656943405,0.0406014719672202,"Yes"]
["Os02g0253800","Os02g0253800","None",2.0547214,2.12923,3.2408838,2.474945,0.008926277,1127,0.008926277,0.0140488656195462,0.0317686752857142,"Yes"]
["Os10g0113100","Os10g0113100","LOC_Os10g02380.1",2.4137068,2.2224083,2.7906103,2.4755752,0.00029890292,46,0.000298903,0.000573423086512091,0.0260630420217391,"Yes"]
["Os08g0427700","Os08g0427700","LOC_Os08g33100.1",1.1546211,3.1306696,3.1531954,2.4794953,0.026800098,2511,0.026800098,0.031301421091997,0.0428097144874552,"Yes"]
["Os02g0804400","Os02g0804400","LOC_Os02g56030.1",2.6974277,1.5716333,3.1695695,2.4795434,0.0098563405,1216,0.009856341,0.0151583146347544,0.032511335321546,"Yes"]
["Os03g0708500","Os03g0708500","LOC_Os03g50080.1",2.2781992,2.1049795,3.055709,2.4796293,0.006368665,829,0.006368665,0.0103340812764896,0.0308138906091676,"Yes"]
["Os12g0115500","Os12g0115500","LOC_Os12g02340.1",2.457326,2.2979946,2.6852016,2.480174,0.02054673,2102,0.02054673,0.0262029419097481,0.0392069143815413,"Yes"]
["Os08g0390100","Os08g0390100","LOC_Os08g30070.1",1.9553967,2.532466,2.960744,2.482869,0.017611183,1870,0.017611183,0.0233108950386437,0.037774574873262,"Yes"]
["Os01g0124400","Os01g0124401","LOC_Os01g03360.1",2.1167421,3.0658674,2.2711573,2.4845889,0.0012257394,187,1.225739E-3,0.00233108950386437,0.0262911183368983,"Yes"]
["Os02g0599400","Os02g0599400","LOC_Os02g38740.1",2.998446,1.5083075,2.9520245,2.4862592,0.0076201097,979,0.00762011,0.0122039391672899,0.0312198786618999,"Yes"]
["Os08g0226600","Os08g0226600","LOC_Os08g13014.1",2.3993816,2.6740375,2.3861408,2.48652,1.6846965E-3,240,1.684697E-3,0.00299177262528047,0.0281554986124999,"Yes"]
["Os04g0296700","Os04g0296700","LOC_Os04g23040.1",2.3595767,2.2433586,2.857708,2.486881,0.00026931366,42,0.000269314,0.000523560209424083,0.025719487,"Yes"]
["GT_Os_A_Specific_0153201","Os06g0203200","LOC_Os06g10170.1",1.8189602,2.519631,3.1232438,2.4872782,0.028462114,1440,0.012465321,0.0179506357516828,0.03472111286875,"Yes"]
["Os11g0438000","Os11g0438000","LOC_Os11g25090.1",2.150013,1.8026872,3.5128083,2.4885027,0.03407499,2969,0.03407499,0.0370107205185739,0.046033945735938,"Yes"]
["Os10g0496900","Os10g0496900","LOC_Os10g35370.1",3.0941277,1.682344,2.6896157,2.4886959,0.018226657,1916,0.018226657,0.0238843181251558,0.0381561175506263,"Yes"]
["Os05g0382900","Os05g0382900","LOC_Os05g31760.1",2.388072,1.8665037,3.2138996,2.4894917,0.011771882,1391,0.011771882,0.0173398155073547,0.0339446575859094,"Yes"]
["Os12g0119000","Os12g0119000","LOC_Os12g02640.1",2.5055532,1.9560108,3.0089002,2.4901547,0.0075248783,967,0.007524878,0.0120543505360259,0.0312122912699069,"Yes"]
["Os07g0489800","Os07g0489800","LOC_Os07g30670.1",2.6983967,1.7458744,3.0292492,2.4911735,0.013349687,1523,0.013349687,0.018985290451259,0.0351579741017728,"Yes"]
["Os02g0522300","Os02g0522300","LOC_Os02g32250.1",2.2363715,2.5176044,2.7247782,2.492918,0.001174078,177,0.001174078,0.00220643231114435,0.0266058014576271,"Yes"]
["Os11g0287000","Os11g0287000","None",1.6059198,2.1819067,3.6913147,2.493047,0.01941374,1999,0.01941374,0.0249189728247319,0.0389537324362181,"Yes"]
["Os01g0966200","Os01g0966200","LOC_Os01g73540.1",1.7099695,2.3260632,3.457323,2.4977853,0.019447312,2003,0.019447312,0.0249688357018199,0.0389431694618072,"Yes"]
["Os05g0451200","Os05g0451200","None",2.6660109,1.8692293,2.9679618,2.5010674,0.004243227,584,0.004243227,0.00727998005484916,0.0291431224263698,"Yes"]
["GT_Os_A_Specific_0083966","Os05g0479475","None",2.4701695,1.8135581,3.2271767,2.5036347,0.012055798,1413,0.012055798,0.0176140613313388,0.0342220847685774,"Yes"]
["Os04g0249500","Os04g0249500","LOC_Os04g17650.1",2.675653,2.150332,2.6876407,2.5045419,0.009694328,1197,0.009694328,0.0149214659685863,0.0324845025964912,"Yes"]
["Os03g0122200","Os03g0122200","LOC_Os03g03020.1",2.2305899,1.6129599,3.6734686,2.5056727,0.014656948,1638,0.014656948,0.0204188481675392,0.0358907316410256,"Yes"]
["Os02g0760600","Os02g0760600","LOC_Os02g52316.1",2.3521924,2.471984,2.692923,2.5056999,0.005593373,757,0.005593373,0.00943654948890551,0.0296367491453104,"Yes"]
["Os04g0583800","Os04g0583800","LOC_Os04g49440.1",2.6556602,1.8143573,3.0530162,2.5076778,0.0024004767,328,0.002400477,0.00408875592121665,0.0293546135579268,"Yes"]
["GT_Os_A_Specific_0160526","Os02g0640100","LOC_Os02g42720.1",1.9025917,2.2847233,3.33679,2.508035,0.010855931,1316,0.010855931,0.0164048865619546,0.033087491824468,"Yes"]
["GT_Os_A_Specific_0004275","Os03g0202001","LOC_Os03g10500.1",2.5180354,2.0343246,2.9718728,2.5080776,0.001074901,160,0.001074901,0.00199451508352031,0.02694642444375,"Yes"]
["Os03g0826200","Os03g0826200","LOC_Os03g61090.1",3.0011187,1.3754368,3.148858,2.5084713,0.023601376,2313,0.023601376,0.0288332086761406,0.0409274185629053,"Yes"]
["Os12g0115300","Os12g0115300","LOC_Os12g02330.2",2.3064618,2.4003968,2.8220077,2.509622,0.010870075,1318,0.010870075,0.0164298180004986,0.0330803268778452,"Yes"]
["Os01g0881900","Os01g0881900","LOC_Os01g65920.1",1.66608,3.37015,2.494638,2.5102894,0.008210721,1045,0.008210721,0.013026676639242,0.0315150257712918,"Yes"]
["Os04g0685200","Os04g0685200","LOC_Os04g58840.1",1.7480617,3.3089442,2.4809017,2.512636,0.026933702,2525,0.026933702,0.031475941161805,0.0427845856324752,"Yes"]
["GT_Os_A_Specific_0128740","Os03g0395000","LOC_Os03g27770.1",2.9102416,1.8122263,2.8199773,2.5141485,2.6530293E-3,400,0.002853737,0.00498628770880079,0.0286158477674999,"Yes"]
["Os01g0343500","Os01g0343500","LOC_Os01g24090.1",2.7395482,2.1520467,2.6521301,2.514575,0.004811054,662,0.004811054,0.00825230615806532,0.029149754673716,"Yes"]
["Os02g0153000","Os02g0153000","LOC_Os02g05900.1",2.210989,2.6838608,2.6506605,2.51517,0.00034180586,55,3.41806E-4,0.000685614559960109,0.0249269793818181,"Yes"]
["Os02g0817900","Os02g0817900","LOC_Os02g57290.1",2.2318044,2.364201,2.9535365,2.516514,0.0004415791,74,0.000441579,0.000922463226128147,0.0239347752567567,"Yes"]
["Os07g0546400","Os07g0546400","LOC_Os07g36230.1",1.6842747,2.9008355,2.9699707,2.5183604,0.023657141,2316,0.023657141,0.0288706058339566,0.0409709812396373,"Yes"]
["Os11g0114000","Os11g0114000","LOC_Os11g02260.1",3.1156402,1.9700446,2.4761925,2.5206258,0.018128693,1905,0.018128693,0.0237471952131638,0.0381701772299212,"Yes"]
["Os11g0114000","Os11g0114150","LOC_Os11g02270.1",3.1156402,1.9700446,2.4761925,2.5206258,0.018128693,1906,0.018128693,0.0237596609324358,0.0381501509039874,"Yes"]
["Os01g0134500","Os01g0134500","LOC_Os01g04260.1",2.9023418,1.7535005,2.912797,2.5228798,3.2056654E-3,448,0.003205665,0.00558464223385689,0.028700719453125,"Yes"]
["Os06g0725300","Os06g0725300","LOC_Os06g50960.1",2.8426318,1.8532362,2.8731227,2.522997,0.006485632,848,0.006485632,0.0105709299426576,0.0306767334339622,"Yes"]
["Os02g0197700","Os02g0197700","LOC_Os02g10400.1",2.58037,2.0588064,2.9348083,2.5246615,0.0053091813,719,0.005309181,0.00896285215656943,0.0296176981794158,"Yes"]
["Os11g0153400","Os11g0153400","LOC_Os11g05540.1",2.246007,2.1187835,3.2123382,2.5257094,0.0068518757,898,0.006851876,0.0111942159062577,0.0306045374565701,"Yes"]
["Os10g0422600","Os10g0422600","LOC_Os10g28680.1",1.6104078,3.4464269,2.5272026,2.5280125,0.030580726,2750,0.030580726,0.0342807279980054,0.044603378904,"Yes"]
["Os02g0457500","Os02g0457500","LOC_Os02g25960.1",1.6402116,2.8401742,3.1133661,2.5312507,0.026460417,2490,0.026460417,0.0310396409872849,0.0426235873843373,"Yes"]
["Os06g0691200","Os06g0691200","LOC_Os06g47600.1",1.795444,2.766029,3.0340133,2.5318286,0.002626844,370,0.002626844,4.61231613064073E-3,0.0284764088756756,"Yes"]
["Os02g0115700","Os02g0115700","LOC_Os02g02400.1",2.4575272,2.532261,2.6157532,2.5351803,0.00015385397,27,0.000153854,0.000336574420344053,0.0228558664444444,"Yes"]
["Os02g0280500","Os02g0280500","LOC_Os02g17920.1",2.6792984,1.6533175,3.2791443,2.5372534,0.0075814556,971,0.007581456,0.0121042134131139,0.0313174253511843,"Yes"]
["GT_Os_A_Specific_0153932","Os06g0536100","LOC_Os06g34530.1",1.796915,2.819099,3.0011225,2.5390456,0.023328887,2298,0.023328887,0.0286462228870605,0.0407189581187989,"Yes"]
["Os01g0226200","Os01g0226200","LOC_Os01g12640.1",1.8283622,1.9373136,3.8535428,2.5397396,0.042465303,3409,0.042465303,0.0424956369982548,0.0499643092792607,"Yes"]
["Os04g0384800","Os04g0384800","LOC_Os04g31550.1",2.9675393,1.7341533,2.9182687,2.539987,0.0076363636,981,0.007636364,0.0122288706058339,0.0312226870581039,"Yes"]
["Os01g0848200","Os01g0848200","LOC_Os01g62900.1",3.2495756,1.3797874,3.0018625,2.543742,0.030565351,2749,0.030565351,0.0342682622787334,0.0445971709206984,"Yes"]
["Os03g0223000","Os03g0223000","LOC_Os03g12238.1",2.1473937,1.7844133,3.7049112,2.5455728,0.022071294,2209,0.022071294,0.0275367738718524,0.0400760345106383,"Yes"]
["Os05g0497600","Os05g0497600","LOC_Os05g41795.1",2.908585,1.6527429,3.082665,2.5479977,0.00577987,775,0.00577987,0.00966093243580154,0.0299136239612903,"Yes"]
["Os05g0497600","Os05g0497675","LOC_Os05g41800.1",2.908585,1.6527429,3.082665,2.5479977,0.00577987,776,0.00577987,0.00967339815507355,0.0298750754768041,"Yes"]
["Os07g0587200","Os07g0587200","LOC_Os07g39850.1",2.0791612,2.266705,3.304811,2.5502257,0.027220571,2543,0.027220571,0.031700324108701,0.042934215604011,"Yes"]
["Os03g0629900","Os03g0629900","LOC_Os03g43114.1",2.583897,2.0101666,3.0673804,2.5538146,0.0019100067,270,1.910007E-3,3.36574420344053E-3,0.0283742151,"Yes"]
["Os04g0543100","Os04g0543100","None",2.6507864,1.9696279,3.0416446,2.5540197,0.0038472337,531,0.003847234,0.00661929693343306,0.0290607449604519,"Yes"]
["Os03g0425000","Os03g0425000","LOC_Os03g31150.1",1.7086749,2.8692727,3.0854506,2.554466,0.0072510676,938,0.007251068,0.0116928446771378,0.0310064325671641,"Yes"]
["Os03g0827700","Os03g0827700","LOC_Os03g61220.1",2.4607697,1.9743643,3.23038,2.5551713,0.0026835485,377,0.002683549,0.00469957616554475,0.0285509682732095,"Yes"]
["Os03g0315800","Os03g0315800","LOC_Os03g20100.1",1.7046285,2.0829473,3.8782792,2.555285,0.035788074,3057,0.035788074,0.0381077038145101,0.046956481784102,"Yes"]
["Os06g0714700","Os06g0714700","LOC_Os06g50070.1",2.3414717,1.8335762,3.5148678,2.5633051,0.015042287,1662,0.015042287,0.0207180254300673,0.0363024146552346,"Yes"]
["Os07g0686800","Os07g0686800","LOC_Os07g48730.1",1.3151608,2.8322434,3.5451646,2.5641897,0.037307046,3143,0.037307046,0.0391797556719022,0.0476101054743875,"Yes"]
["Os02g0533300","Os02g0533300","LOC_Os02g33030.1",1.271215,3.029657,3.4031482,2.5680068,0.01811937,1903,0.01811937,0.0237222637746197,0.0381906427062532,"Yes"]
["Os03g0221700","Os03g0221700","LOC_Os03g12150.1",1.7099099,3.0424109,2.9557076,2.5693429,0.028336147,2601,0.028336147,0.0324233358264771,0.0436971494106113,"Yes"]
["Os04g0692600","Os04g0692600","LOC_Os04g59610.1",3.4026284,1.6848683,2.6366534,2.5747168,0.03984126,3282,0.03984126,0.0409124906507105,0.0486908268921389,"Yes"]
["Os08g0531100","Os08g0531100","LOC_Os08g41890.1",0.8714118,3.0846624,3.768186,2.5747535,0.038127586,3178,0.038127586,0.0396160558464223,0.0481213805682819,"Yes"]
["Os12g0113900","Os12g0113900","LOC_Os12g02230.1",1.7693949,2.3726058,3.583068,2.575023,0.022626135,2248,0.022626135,0.0280229369234604,0.04037074176379,"Yes"]
["Os08g0553800","Os08g0553800","LOC_Os08g44000.1",2.5526037,1.844389,3.3282118,2.5750682,0.019160924,1981,0.019160924,0.0246945898778359,0.0387957931166077,"Yes"]
["Os08g0345800","Os08g0345800","LOC_Os08g25734.1",3.092327,2.0046854,2.628613,2.5752084,1.4330781E-3,208,1.433078E-3,2.59286960857641E-3,0.0276349800865384,"Yes"]
["Os03g0288900","Os03g0288900","LOC_Os03g17960.1",1.5524197,3.0935943,3.086885,2.5776331,0.020284224,2084,0.020284224,0.0259785589628521,0.039040317880998,"Yes"]
["Os11g0113700","Os11g0113700","LOC_Os11g02240.1",2.1540341,2.7089276,2.8731732,2.5787117,0.0043245284,594,0.004324528,0.00740463724756918,0.0292014845252525,"Yes"]
["GT_Os_A_Specific_0169546","Os07g0407700","LOC_Os07g22494.1",2.9787006,1.9034905,2.8548775,2.579023,0.0016803917,235,0.001670285,2.92944402892046E-3,0.0285085665319148,"Yes"]
["Os12g0637400","Os12g0637400","LOC_Os12g44050.1",1.8412466,2.8326206,3.0636272,2.5791647,0.005207948,708,0.005207948,0.00882572924457741,0.0295043494745762,"Yes"]
["GT_Os_A_Specific_0116099","Os06g0133800","LOC_Os06g04270.1",2.6303048,2.25849,2.8514657,2.580087,0.00039667173,1819,0.01691389,0.0226751433557716,0.0372961037877954,"Yes"]
["Os_A_Specific_0054866","Os02g0831500","LOC_Os02g58480.1",2.3502965,2.0305095,3.368482,2.583096,0.005924819,794,0.005924819,0.00989778110196958,0.0299300365352644,"Yes"]
["Os04g0583700","Os04g0583700","LOC_Os04g49430.1",1.6556702,2.5632176,3.541829,2.5869057,0.010946824,1324,0.010946824,0.0165046123161306,0.0331629237643504,"Yes"]
["Os08g0240000","Os08g0240000","LOC_Os08g14190.1",2.7430382,1.8939996,3.1242485,2.5870955,0.0051116743,698,0.005111674,0.00870107205185739,0.0293738172120343,"Yes"]
["Os02g0528500","Os02g0528500","None",2.714095,1.7938409,3.2549238,2.58762,0.006936555,909,0.006936555,0.0113313388182498,0.0306078350990098,"Yes"]
["Os07g0253000","Os07g0253000","LOC_Os07g14910.1",1.7242169,2.7419949,3.300404,2.588872,0.008151201,1040,0.008151201,0.012964348042882,0.0314369877028846,"Yes"]
["Os01g0303600","Os01g0303600","LOC_Os01g19800.1",2.212809,2.5979204,2.9625826,2.591104,0.0025034389,346,0.002503439,0.00431313886811269,0.0290210804306358,"Yes"]
["Os09g0560000","Os09g0560000","LOC_Os09g38710.1",2.4346724,2.1877832,3.15976,2.5940719,0.041566417,3365,0.041566417,0.0419471453502867,0.0495461808579494,"Yes"]
["Os06g0152800","Os06g0152800","LOC_Os06g05950.1",2.6153402,2.0590172,3.1084204,2.5942593,0.014551975,1631,0.014551975,0.0203315881326352,0.0357866166309012,"Yes"]
["Os03g0736300","Os03g0736300","LOC_Os03g52630.1",2.292163,2.0789738,3.4154387,2.595525,0.018201828,1913,0.018201828,0.0238469209673398,0.0381638955086252,"Yes"]
["Os07g0665100","Os07g0665100","None",1.7860456,2.78122,3.2333026,2.6001894,0.016961763,1823,0.016961763,0.0227250062328596,0.0373196003252879,"Yes"]
["Os04g0534600","Os04g0534600","LOC_Os04g45210.1",2.841905,2.426252,2.5428004,2.6036525,0.0041812947,571,0.004181295,0.00711792570431313,0.0293715836164623,"Yes"]
["Os08g0566600","Os08g0566600","LOC_Os08g45190.1",2.6995306,2.2900715,2.8259974,2.6051998,3.0841832E-3,428,0.003084183,0.00533532784841685,0.0289034065724299,"Yes"]
["Os04g0507800","Os04g0507800","LOC_Os04g42870.1",3.0822697,1.4479527,3.2882833,2.6061685,0.013593661,1546,0.013593661,0.019272001994515,0.0352679005633893,"Yes"]
["Os11g0498600","Os11g0498600","LOC_Os11g30500.1",1.4379487,3.7873693,2.5935774,2.6062984,0.03874865,3212,0.03874865,0.0400398903016704,0.0483875576432129,"Yes"]
["Os11g0184300","Os11g0184300","LOC_Os11g08120.1",2.1794853,3.1947703,2.4563308,2.6101954,0.0023911435,326,2.391144E-3,0.00406382448267265,0.0294198729570552,"Yes"]
["Os01g0941800","Os01g0941800","LOC_Os01g71420.1",2.1179733,2.5167646,3.1971588,2.6106322,0.0024878923,342,0.002487892,0.00426327599102468,0.0291781719649122,"Yes"]
["Os12g0605100","Os12g0605100","LOC_Os12g41200.1",2.1092963,3.3167548,2.408094,2.6113818,0.008343264,1053,0.008343264,0.013126402393418,0.0317804671452991,"Yes"]
["Os08g0102000","Os08g0102000","LOC_Os08g01170.1",2.8801155,1.8497057,3.1061683,2.6119964,0.008983933,1130,0.008983933,0.0140862627773622,0.031888986958407,"Yes"]
["Os02g0810900","Os02g0810900","LOC_Os02g56600.1",2.8860083,2.5446086,2.4100113,2.6135428,0.038920432,3225,0.038920432,0.0402019446522064,0.048406155892093,"Yes"]
["Os09g0487200","Os09g0487200","LOC_Os09g31230.1",2.5621872,1.5526772,3.7271338,2.6139994,0.023425069,2305,0.023425069,0.0287334829219646,0.0407626688759219,"Yes"]
["Os03g0782200","Os03g0782200","LOC_Os03g56930.1",3.7615771,1.6947656,2.385847,2.6140633,0.016736494,1803,0.016736494,0.0224756918474196,0.0372324334076539,"Yes"]
["Os01g0140100","Os01g0140100","LOC_Os01g04710.1",2.709312,1.8284063,3.3085532,2.615424,0.024803177,2390,0.024803177,0.0297930690600847,0.0416257501870292,"Yes"]
["Os01g0863800","Os01g0863800","LOC_Os01g64410.1",1.8314486,3.315662,2.7038584,2.6169896,0.01191791,1402,0.01191791,0.0174769384193467,0.0340961034308131,"Yes"]
["Os04g0490800","Os04g0490800","LOC_Os04g41340.1",2.8637114,1.8027296,3.192934,2.6197917,0.019456578,2004,0.019456578,0.024981301421092,0.0389422826137724,"Yes"]
["Os02g0729400","Os02g0729400","LOC_Os02g49680.1",3.2526217,1.5221462,3.088172,2.62098,0.014496089,1627,0.014496089,0.0202817252555472,0.0357368242034419,"Yes"]
["Os08g0254500","Os08g0254500","LOC_Os08g15460.1",2.6059537,2.017095,3.245181,2.6227434,0.0031850543,443,0.003185054,5.52231363749688E-3,0.0288380397155756,"Yes"]
["Os09g0503100","Os09g0503100","LOC_Os09g32640.1",2.60463,1.9195642,3.3446379,2.622944,3.8833492E-3,538,0.003883349,0.00670655696833707,0.0289518826003717,"Yes"]
["Os01g0875700","Os01g0875700","LOC_Os01g65480.1",2.33641,2.3679543,3.1651525,2.6231723,0.016285809,1765,0.016285809,0.0220019945150835,0.0370098469682719,"Yes"]
["Os10g0471400","Os10g0471400","LOC_Os10g33290.1",2.6967726,2.2430406,2.932065,2.6239593,0.0071439506,925,0.007143951,0.0115307903266018,0.030977716174054,"Yes"]
["Os08g0446800","Os08g0446800","LOC_Os08g34700.1",2.7087898,1.0504198,4.1175947,2.6256015,0.038189914,3184,0.038189914,0.0396908501620543,0.0481092164114321,"Yes"]
["Os08g0546300","Os08g0546300","LOC_Os08g43290.1",2.0650663,2.669526,3.143876,2.626156,0.008382856,1058,0.008382856,0.0131887309897781,0.0317803737391304,"Yes"]
["Os04g0249900","Os04g0249900","LOC_Os04g17669.1",2.2894173,2.3027697,3.2891603,2.6271157,2.7962814E-3,398,0.002796281,0.00496135627025679,0.028180610781407,"Yes"]
["GT_Os_A_Specific_0025253","Os06g0232600","LOC_Os06g12630.1",2.8650665,1.9715881,3.0455332,2.6273959,2.6428006E-3,173,0.001160107,2.15656943405634E-3,0.0268970472658959,"Yes"]
["Os01g0894600","Os01g0894600","LOC_Os01g66970.1",1.4408426,3.0876527,3.3567486,2.6284146,0.03521624,3024,0.03521624,0.037696335078534,0.0467104294444444,"Yes"]
["Os06g0693200","Os06g0693200","LOC_Os06g47820.1",2.56499,1.745666,3.585185,2.631947,0.017124346,1838,0.017124346,0.0229119920219396,0.037369832321001,"Yes"]
["Os04g0129200","Os04g0129200","LOC_Os04g03990.1",2.8637843,2.2268376,2.8167038,2.6357753,0.00033316677,54,0.000333167,0.000673148840688107,0.0247469043888888,"Yes"]
["Os03g0161600","Os03g0161600","LOC_Os03g06610.1",3.223851,2.1181364,2.5669188,2.6363022,0.003012699,415,0.003012699,0.00517327349788082,0.0291179173228915,"Yes"]
["Os12g0548300","Os12g0548300","LOC_Os12g36194.1",2.614421,1.9009705,3.4115095,2.6423004,4.385618E-3,603,4.385618E-3,0.0075168287210172,0.0291719963482587,"Yes"]
["Os07g0663700","Os07g0663700","LOC_Os07g46846.1",2.9262562,1.4059072,3.5951781,2.6424472,0.014696154,1640,0.014696154,0.0204437796060832,0.0359428498134146,"Yes"]
["Os05g0460600","Os05g0460600","LOC_Os05g38570.1",3.3607154,2.1257458,2.4438138,2.643425,0.01084243,1312,0.01084243,0.0163550236848666,0.0331470935442073,"Yes"]
["Os03g0416200","Os03g0416200","LOC_Os03g30250.1",2.0561152,2.538023,3.3403983,2.6448455,0.018732727,1955,0.018732727,0.0243704811767639,0.0384332317120204,"Yes"]
["Os03g0409600","Os03g0409600","LOC_Os03g29584.1",2.80513,1.9582047,3.1767464,2.6466937,0.0020657443,292,2.065744E-3,3.63999002742458E-3,0.0283756821369863,"Yes"]
["Os05g0390100","Os05g0390100","LOC_Os05g32390.1",2.2068691,2.1686049,3.565906,2.6471267,0.0154593345,1696,0.015459335,0.0211418598853153,0.0365609626680424,"Yes"]
["Os06g0264200","Os06g0264200","LOC_Os06g15330.1",2.953125,1.8918915,3.1028576,2.6492913,0.04107483,3343,0.04107483,0.0416728995263026,0.0492824239096619,"Yes"]
["Os_A_Specific_0109263","Os05g0261700","LOC_Os05g17604.1",2.7362146,1.916007,3.300085,2.650769,0.009982775,1229,0.009982775,0.0153203689852904,0.032580073657445,"Yes"]
["Os10g0168900","Os10g0168900","LOC_Os10g08754.1",2.3112683,2.5266662,3.1194062,2.652447,0.0072535817,939,0.007253582,0.0117053103964098,0.0309841505878594,"Yes"]
["Os11g0707100","Os11g0707100","LOC_Os11g47980.1",3.807269,1.397872,2.7571783,2.6541064,0.032195162,2872,0.032195162,0.0358015457491897,0.0449633686566852,"Yes"]
["Os03g0125000","Os03g0125000","LOC_Os03g03360.1",2.39892,1.8556137,3.7143974,2.6563103,0.018160598,1910,0.018160598,0.0238095238095238,0.0381372558,"Yes"]
["Os03g0243700","Os03g0243700","LOC_Os03g14010.1",2.6793303,1.3367333,3.953096,2.6563866,0.025097312,2410,0.025097312,0.0300423834455248,0.041769841673029,"Yes"]
["Os03g0290900","Os03g0290900","LOC_Os03g18110.1",3.5951085,1.1845701,3.1992836,2.659654,0.026676707,2500,0.026676707,0.0311642981800049,0.0428001087108,"Yes"]
["Os03g0770900","Os03g0770900","LOC_Os03g56070.1",2.5195756,2.9008985,2.559297,2.6599238,0.0006794806,101,0.000679481,1.2590376464722E-3,0.0269841414950495,"Yes"]
["Os06g0608700","Os06g0608700","LOC_Os06g40640.1",3.4840193,1.776948,2.7194958,2.6601543,0.018343668,1928,0.018343668,0.0240339067564198,0.038162060346473,"Yes"]
["Os07g0277200","Os07g0277200","LOC_Os07g17560.1",3.3557162,1.3787584,3.2495227,2.6613324,0.027169712,2540,0.027169712,0.031662926950885,0.0429046121385826,"Yes"]
["Os07g0544800","Os07g0544800","LOC_Os07g36080.1",3.5283136,1.5184879,2.9385176,2.661773,0.03380613,2953,0.03380613,0.0368112690102218,0.045918180640027,"Yes"]
["Os05g0500600","Os05g0500600","LOC_Os05g42130.1",2.2236724,2.2078075,3.5540786,2.6618528,0.008140612,1039,0.008140612,0.01295188232361,0.0314263664408084,"Yes"]
["Os04g0357700","Os04g0357700","LOC_Os04g28850.1",2.721754,2.012648,3.2513824,2.6619282,0.023015527,2276,0.023015527,0.0283719770630765,0.0405603158159051,"Yes"]
["Os10g0555700","Os10g0555700","LOC_Os10g40710.1",2.8873029,1.7295527,3.3826852,2.6665137,0.008074282,1030,0.008074282,0.012839690850162,0.0314426651475728,"Yes"]
["Os07g0617100","Os07g0617100","LOC_Os07g42520.1",1.3948464,2.4207006,4.1855597,2.6670353,0.029623855,2683,0.029623855,0.0334455248067813,0.0442867247130078,"Yes"]
["Os11g0454000","Os11g0454000","LOC_Os11g26760.1",2.639299,3.4246125,1.9498353,2.6712487,0.03072193,2756,0.03072193,0.0343555223136375,0.044711778385341,"Yes"]
["Os02g0690000","Os02g0690000","LOC_Os02g46473.1",2.3613267,1.8112583,3.845118,2.6725676,0.02310084,2283,0.02310084,0.0284592370979805,0.0405858384756898,"Yes"]
["Os02g0617300","Os02g0617300","LOC_Os02g40430.1",2.135294,2.1768928,3.7295403,2.6805756,0.015172999,1671,0.015172999,0.0208302169035153,0.0364206457145421,"Yes"]
["Os03g0157600","Os03g0157600","LOC_Os03g06170.1",1.8314924,2.6713443,3.5437813,2.682206,0.009812371,1213,0.009812371,0.0151209174769384,0.0324463479645507,"Yes"]
["Os05g0139100","Os05g0139100","LOC_Os05g04740.1",1.055572,3.3448415,3.6551785,2.685197,0.031072728,2789,0.031072728,0.0347668910496135,0.0446872398737898,"Yes"]
["Os_A_Specific_0212482","Os02g0596000","LOC_Os02g38240.1",2.5321946,1.9003153,3.6234288,2.685313,0.036410887,3086,0.036410887,0.0384692096733981,0.0473247141143875,"Yes"]
["Os04g0481300","Os04g0481300","LOC_Os04g40530.1",1.9370255,3.0783024,3.0430584,2.6861286,0.014068103,1586,0.014068103,0.0197706307653951,0.0355782857080706,"Yes"]
["Os07g0468100","Os07g0468100","LOC_Os07g28480.1",3.1267505,2.044805,2.8911023,2.6875527,0.0025308551,351,0.002530855,4.3754674644727E-3,0.0289209669658119,"Yes"]
["Os_A_Specific_0240733","Os04g0677650","LOC_Os04g58130.1",2.2536426,2.3573241,3.4551435,2.6887035,0.0069751716,914,6.975172E-3,0.0113936674146098,0.0306098631203501,"Yes"]
["Os05g0111200","Os05g0111200","LOC_Os05g02060.1",2.5237117,2.4514322,3.0932646,2.6894696,0.00045522398,76,4.55224E-4,0.000947394664672151,0.0240250455789473,"Yes"]
["Os05g0518200","Os05g0518200","LOC_Os05g44190.1",1.7857623,2.9293318,3.358919,2.6913376,0.0054692384,745,0.005469238,0.00928696085764148,0.0294457900912751,"Yes"]
["GT_Os_A_Specific_0153922","Os01g0368000","LOC_Os01g27050.1",2.338848,2.5949163,3.1473079,2.6936905,0.0048021744,660,0.004802174,0.00822737471952131,0.0291841210818181,"Yes"]
["Os11g0116200","Os11g0116200","LOC_Os11g02424.1",2.405898,2.6502237,3.0328846,2.6963356,0.03356465,2940,0.03356465,0.0366492146596858,0.0457917725,"Yes"]
["Os09g0438100","Os09g0438100","LOC_Os09g26670.1",3.3741603,1.6842065,3.032803,2.6970565,0.009949236,1225,0.009949236,0.0152705061082024,0.0325766413028571,"Yes"]
["Os02g0732200","Os02g0732200","LOC_Os02g49950.1",3.1546807,1.8861203,3.051268,2.6973565,0.012161463,1421,0.012161463,0.0177137870855148,0.0343276763497537,"Yes"]
["Os12g0109800","Os12g0109850","LOC_Os12g01910.1",3.362772,2.3118267,2.4181027,2.697567,0.01053409,1282,0.01053409,0.0159810521067065,0.0329580616146645,"Yes"]
["Os06g0320500","Os06g0320500","LOC_Os06g21590.1",3.4237003,1.9968271,2.6923733,2.7043002,0.041883215,3382,0.041883215,0.0421590625779107,0.0496728490138971,"Yes"]
["Os05g0320500","Os05g0320500","LOC_Os05g25620.1",2.6956449,2.7765222,2.641489,2.704552,9.267137e-06,5,9.26714e-06,6.23285963600099e-05,0.00743409970799999,"Yes"]
["Os12g0115900","Os12g0115900","LOC_Os12g02380.1",3.0261865,1.3321395,3.7600007,2.7061088,0.029541876,2677,0.029541876,0.0333707304911493,0.0442631545147553,"Yes"]
["Os03g0329500","Os03g0329500","LOC_Os03g21210.1",2.7871351,2.4796066,2.8532906,2.7066774,1.1141463E-4,19,1.11415E-4,2.36848666168037E-4,0.0235202928947368,"Yes"]
["Os03g0283400","Os03g0283400","LOC_Os03g17500.1",1.6068974,2.4771824,4.037884,2.7073212,0.03642443,3087,0.03642443,0.0384816753926701,0.0473269804761904,"Yes"]
["Os06g0647100","Os06g0647100","LOC_Os06g43900.1",2.6335707,1.948123,3.5426283,2.7081072,0.008658137,1094,0.008658137,0.0136374968835701,0.0317438642659963,"Yes"]
["Os04g0670100","Os04g0670100","LOC_Os04g57430.1",1.0867538,3.4390607,3.6029792,2.7095978,0.031106658,2791,0.031106658,0.0347918224881575,0.0447039789458975,"Yes"]
["Os02g0589000","Os02g0589000","LOC_Os02g37654.1",2.1389885,2.6107426,3.3871794,2.7123034,0.005418428,735,0.005418428,9.16230366492146E-3,0.0295691356571428,"Yes"]
["GT_Os_A_Specific_0086351","Os04g0278900","LOC_Os04g20990.1",3.5154924,1.614151,3.0090895,2.712911,0.023058524,2279,0.023058524,0.0284093742208925,0.0405825975269855,"Yes"]
["Os11g0461200","Os11g0461200","LOC_Os11g27370.1",1.918952,2.1805072,4.0425777,2.7140121,0.016183855,1755,0.016183855,0.0218773373223635,0.0369877164700854,"Yes"]
["Os02g0302500","Os02g0302500","LOC_Os02g19950.1",2.8865361,2.228599,3.0350165,2.7167175,0.03388581,2956,0.03388581,0.0368486661680379,0.0459796968572395,"Yes"]
["Os02g0744200","Os02g0744200","LOC_Os02g51040.1",2.3608475,3.3849807,2.4156861,2.7205048,0.029190835,2656,0.029190835,0.0331089503864373,0.0440829966810993,"Yes"]
["Os07g0467200","Os07g0467200","LOC_Os07g28400.1",2.7146711,2.2641363,3.190383,2.7230635,0.007226299,937,0.007226299,0.0116803789578658,0.0309334955058698,"Yes"]
["Os01g0300900","Os01g0300900","LOC_Os01g19480.1",1.6118302,2.5931678,3.967177,2.7240582,0.016051918,1745,0.016051918,0.0217526801296434,0.036896414382808,"Yes"]
["Os04g0568600","Os04g0568600","LOC_Os04g48020.1",2.4711552,2.5135908,3.1900272,2.7249243,9.0840843E-4,130,0.000908408,0.00162054350536025,0.028027880676923,"Yes"]
["Os12g0583500","Os12g0583500","LOC_Os12g39380.1",2.7683945,1.9002151,3.5172577,2.7286224,0.0052006803,707,0.00520068,0.00881326352530541,0.029504847920792,"Yes"]
["Os03g0248300","Os03g0248300","LOC_Os03g14420.1",1.2728128,3.2690258,3.6514773,2.731105,0.035875894,3059,0.035875894,0.0381326352530541,0.0470409319496567,"Yes"]
["Os03g0116600","Os03g0116600","LOC_Os03g02544.1",2.404483,1.6763949,4.11877,2.733216,0.03538114,3035,0.03538114,0.037833457990526,0.0467590617924217,"Yes"]
["Os04g0460300","Os04g0460300","LOC_Os04g38680.1",2.6717849,2.3382955,3.194573,2.7348843,0.00096813386,139,0.000968134,1.73273497880827E-3,0.0279365861438848,"Yes"]
["Os12g0492600","Os12g0492600","None",3.4226046,1.8025379,2.9977684,2.7409704,0.009216253,1153,0.009216253,0.0143729743206183,0.0320610501153512,"Yes"]
["Os12g0111900","Os12g0111900","LOC_Os12g02070.1",3.290989,2.3818393,2.5565195,2.7431157,1.4279886E-3,207,1.427989E-3,0.00258040388930441,0.0276698738115942,"Yes"]
["Os04g0465500","Os04g0465500","LOC_Os04g39140.1",1.877984,2.3416138,4.011853,2.743817,0.024262726,2361,0.024262726,0.0294315632011967,0.0412188877534942,"Yes"]
["Os01g0555800","Os01g0555800","LOC_Os01g37510.1",2.9344816,1.9668684,3.3308554,2.7440684,0.005603308,758,0.005603308,0.00944901520817751,0.0296502221477572,"Yes"]
["Os05g0441500","Os05g0441500","LOC_Os05g36994.1",2.958293,2.0807743,3.194458,2.7445085,0.0033775952,473,0.003377595,0.00589628521565694,0.0286417199682875,"Yes"]
["Os09g0441000","Os09g0441000","LOC_Os09g26920.1",2.0563064,2.1787505,4.0032105,2.7460892,0.034894202,3011,0.034894202,0.037534280727998,0.0464831100039853,"Yes"]
["Os07g0605600","Os01g0881800","LOC_Os01g65904.1",2.4177542,1.6676168,4.152931,2.7461007,0.025781123,2455,0.025781123,0.0306033408127648,0.042121419288391,"Yes"]
["Os07g0605600","Os07g0605600","LOC_Os07g41420.1",2.4177542,1.6676168,4.152931,2.7461007,0.025781123,2456,0.025781123,0.0306158065320369,0.0421042688733713,"Yes"]
["Os11g0621400","Os11g0621400","LOC_Os11g40600.1",2.6348877,1.8857965,3.7405586,2.7537477,0.015750276,1720,0.015750276,0.0214410371478434,0.0367292773465116,"Yes"]
["Os05g0382600","Os05g0382600","LOC_Os05g31750.1",2.7412176,2.1150389,3.4073086,2.7545216,0.010355112,1259,0.010355112,0.0156943405634505,0.0329899557045274,"Yes"]
["GT_Os_A_Specific_0547031","Os01g0618900","LOC_Os01g43160.1",2.851523,2.1557188,3.2574067,2.7548828,0.0013048149,1085,8.547486E-3,0.0135253054101221,0.0315981256645161,"Yes"]
["GT_Os_A_Specific_0145975","Os02g0640800","LOC_Os02g42810.1",2.6710057,2.5109935,3.0905838,2.7575276,0.027445411,520,0.003748107,0.00648217402144103,0.0289108791865384,"Yes"]
["Os04g0563700","Os04g0563700","LOC_Os04g47580.1",1.6557331,3.8206048,2.797039,2.7577922,0.013920253,1574,0.013920253,0.0196210421341311,0.035472766698221,"Yes"]
["Os04g0459900","Os04g0459900","LOC_Os04g38640.1",2.8103538,1.942862,3.5226684,2.7586281,5.0931848E-3,697,0.005093185,0.00868860633258539,0.0293095624605451,"Yes"]
["Os10g0573000","Os10g0573000","LOC_Os10g42240.1",2.6086931,2.2413912,3.4270086,2.759031,2.1233615E-3,297,0.002123362,3.70231862378459E-3,0.028676111050505,"Yes"]
["Os04g0583600","Os04g0583600","LOC_Os04g49420.1",2.3177633,3.0507903,2.9088006,2.759118,2.6760446E-3,376,0.002676045,0.00468711044627275,0.0285468523803191,"Yes"]
["Os06g0574100","Os06g0574100","LOC_Os06g37610.1",2.3284988,2.4316692,3.519372,2.7598467,0.0027530952,389,0.002753095,0.00484916479680877,0.0283873111696658,"Yes"]
["Os08g0469600","Os08g0469600","LOC_Os08g36580.1",2.6156974,2.1397834,3.5244498,2.7599766,2.568688E-3,360,2.568688E-3,0.00448765893792071,0.0286194654666666,"Yes"]
["Os05g0480400","Os05g0480400","LOC_Os05g40200.1",2.381586,2.3734403,3.535489,2.7635052,0.0027641002,392,0.0027641,0.00488656195462478,0.0282826660714285,"Yes"]
["Os01g0827700","Os01g0827700","LOC_Os01g61200.1",2.6635313,2.6355085,2.995368,2.7648027,0.00013236972,24,0.00013237,0.000299177262528047,0.02212233625,"Yes"]
["Os12g0534100","Os12g0534100","LOC_Os12g34880.1",2.5777073,2.388116,3.331831,2.7658846,0.0011012318,162,0.001101232,2.01944652206432E-3,0.0272656885925925,"Yes"]
["Os01g0310600","Os01g0310600","LOC_Os01g20894.1",2.6369867,2.3787131,3.2831297,2.7662766,2.4068085E-3,331,0.002406809,0.00412615307903266,0.0291652897250755,"Yes"]
["GT_Os_A_Specific_0073587","Os12g0271700","LOC_Os12g17320.1",3.3259869,2.1628046,2.817161,2.7686508,0.0021089707,626,4.542796E-3,0.00780354026427324,0.0291072759680511,"Yes"]
["Os02g0170000","Os02g0170000","LOC_Os02g07360.1",2.6121602,2.2897372,3.4062886,2.769395,2.0054304E-3,283,0.00200543,0.00352779855397656,0.0284232499293286,"Yes"]
["Os06g0138900","Os06g0138900","LOC_Os06g04699.1",2.1523767,3.1986246,2.9646783,2.7718933,0.00538125,728,0.00538125,0.00907504363001745,0.0296486177884615,"Yes"]
["Os03g0844000","Os03g0844000","LOC_Os03g62690.1",2.3720598,2.0055914,3.9409542,2.7728684,0.029804833,2696,0.029804833,0.0336075791573173,0.044342427731083,"Yes"]
["Os10g0502000","Os10g0502000","LOC_Os10g35810.1",3.5618744,1.5999241,3.166525,2.7761078,0.017629594,1872,0.017629594,0.0233358264771877,0.0377736653493589,"Yes"]
["Os08g0132700","Os08g0132700","None",2.619052,2.421369,3.2884512,2.776291,0.010809925,1302,0.010809925,0.0162303664921465,0.0333015431451612,"Yes"]
["Os07g0195300","Os07g0195300","LOC_Os07g09710.1",1.9719963,3.7755618,2.5815744,2.7763774,0.007180819,931,0.007180819,0.0116055846422338,0.0309369119323308,"Yes"]
["Os07g0506600","Os07g0506600","LOC_Os07g32340.1",2.341339,3.050869,2.9390287,2.7770789,0.036877763,3119,0.036877763,0.0388805784093742,0.0474244012160949,"Yes"]
["Os11g0302300","Os01g0238375","None",2.6275501,2.1457963,3.5582252,2.7771904,0.003656123,507,0.003656123,0.00632011967090501,0.0289244760414201,"Yes"]
["Os04g0625000","Os04g0625000","LOC_Os04g53350.1",1.9264302,3.3272066,3.0811903,2.7782757,0.017686503,1875,0.017686503,0.0233732236350037,0.0378349672176,"Yes"]
["Os02g0531200","Os02g0531200","LOC_Os02g32930.1",2.7451596,2.004981,3.5854855,2.7785423,0.013506738,1535,0.013506738,0.019134879082523,0.0352935023570032,"Yes"]
["Os07g0252800","Os07g0252800","LOC_Os07g14890.1",2.6891966,3.3796458,2.2798352,2.7828925,0.0027071135,385,2.707114E-3,0.00479930191972076,0.0282032058545454,"Yes"]
["Os08g0224300","Os08g0224300","LOC_Os08g12780.1",2.8121128,2.127151,3.414481,2.7845814,0.0039229696,545,0.00392297,0.00679381700324108,0.0288716195779816,"Yes"]
["Os01g0229400","Os01g0229400","LOC_Os01g12900.1",3.0576725,2.7999616,2.5163298,2.7913215,0.00019509457,32,1.95095E-4,0.000398903016704063,0.02445393890625,"Yes"]
["Os11g0285000","Os11g0285000","LOC_Os11g18194.1",2.5071168,2.6145225,3.256669,2.7927694,0.01407111,1587,0.01407111,0.0197830964846671,0.0355634670510396,"Yes"]
["Os04g0221000","Os04g0221000","LOC_Os04g14410.1",3.3173685,1.5839081,3.4870348,2.7961037,0.010382711,1263,0.010382711,0.0157442034405385,0.0329731225819477,"Yes"]
["Os04g0412200","Os04g0412200","LOC_Os04g33630.1",2.3568635,2.1608777,3.8777585,2.7985,0.006481958,844,0.006481958,0.0105210670655696,0.0308046605900473,"Yes"]
["Os05g0337400","Os05g0337400","LOC_Os05g27100.1",2.628231,2.0417547,3.7307262,2.8002374,0.010747372,1297,0.010747372,0.0161680378957865,0.0332364757841171,"Yes"]
["Os01g0703000","Os01g0703000","None",2.0954075,2.3347545,3.983501,2.8045542,0.020424644,2095,0.020424644,0.0261156818748441,0.039104175219093,"Yes"]
["Os04g0692800","Os04g0692800","LOC_Os04g59630.1",2.4119644,2.7496681,3.253502,2.805045,0.0045481506,627,0.004548151,0.00781600598354525,0.029095109507177,"Yes"]
["Os03g0587200","Os03g0587200","LOC_Os03g39020.1",2.0278358,3.1719341,3.2200565,2.806609,0.003772164,524,0.003772164,6.53203689852904E-3,0.0288743316870229,"Yes"]
["Os12g0204500","Os12g0204500","LOC_Os12g10320.1",2.1945868,2.7421556,3.494855,2.8105323,0.0032674982,456,0.003267498,0.00568436798803291,0.0287410843815789,"Yes"]
["Os07g0684100","Os07g0684100","LOC_Os07g48510.1",1.9480352,3.0467186,3.4376059,2.8107865,0.0035323005,493,0.003532301,0.00614559960109698,0.0287384570202839,"Yes"]
["Os09g0518900","Os09g0518900","LOC_Os09g34320.1",1.5647516,3.0297575,3.8635168,2.819342,0.017998345,1890,0.017998345,0.0235602094240837,0.0381964877222222,"Yes"]
["Os11g0118600","Os11g0118600","LOC_Os11g02630.1",2.6851907,2.4522424,3.3305907,2.8226745,1.3701732E-3,204,0.001370173,0.0025430067314884,0.0269400191323529,"Yes"]
["Os01g0207600","Os01g0207600","LOC_Os01g10960.1",1.6901083,3.1373563,3.6417975,2.8230875,0.042463567,3408,0.042463567,0.0424831712789827,0.0499769270061619,"Yes"]
["Os02g0601700","Os02g0601700","LOC_Os02g38970.1",2.3235908,3.137351,3.012648,2.82453,0.010910188,1321,0.010910188,0.0164672151583146,0.0331269977804693,"Yes"]
["Os05g0565400","Os05g0565400","LOC_Os05g49060.1",2.73528,1.9848871,3.7621412,2.8274362,0.009735381,1203,0.009735381,0.0149962602842184,0.0324593625860349,"Yes"]
["Os03g0370400","Os03g0370400","LOC_Os03g25440.1",2.2777238,2.9037466,3.30411,2.8285267,0.007938304,1014,0.007938304,0.01264023934181,0.0314009244023668,"Yes"]
["Os09g0433000","Os09g0433000","LOC_Os09g26310.1",2.4576788,1.7034583,4.3311844,2.8307736,0.027238347,2544,0.027238347,0.031712789827973,0.0429453654941037,"Yes"]
["Os02g0110600","Os02g0110600","LOC_Os02g02040.1",1.9980474,2.7083478,3.788365,2.8315868,0.0069627124,913,0.006962712,0.0113812016953378,0.0305886504184008,"Yes"]
["Os05g0419800","Os05g0419800","LOC_Os05g34700.1",2.3083482,3.2780666,2.910159,2.8321915,1.3458588E-3,202,1.345859E-3,0.0025180752929444,0.0267239626188118,"Yes"]
["Os01g0192000","Os01g0192000","LOC_Os01g09620.1",2.7830887,1.6847434,4.0313644,2.8330657,0.014897117,1655,0.014897117,0.0206307653951633,0.036104130687009,"Yes"]
["Os05g0140000","Os05g0140000","None",3.2162628,2.0026922,3.2803411,2.8330986,0.008935576,1129,0.008935576,0.0140737970580902,0.0317454343100088,"Yes"]
["Os05g0406100","Os05g0406100","LOC_Os05g33630.1",2.729093,2.7128253,3.058495,2.8334713,0.0010089994,146,1.008999E-3,1.81999501371229E-3,0.0277198286917808,"Yes"]
["Os03g0654400","Os03g0654400","LOC_Os03g45170.1",3.83884,1.3663373,3.3071742,2.8374507,0.026893063,2521,0.026893063,0.031426078284717,0.0427878126509321,"Yes"]
["Os05g0386700","Os05g0386700","None",1.8371954,2.1080866,4.572266,2.8391826,0.032148268,2865,0.032148268,0.0357142857142857,0.0450075752,"Yes"]
["Os04g0383700","Os04g0383700","LOC_Os04g31460.1",2.8043814,1.9036655,3.8125587,2.8402016,7.2929757E-3,942,0.007292976,0.0117427075542258,0.0310532130955413,"Yes"]
["Os06g0294600","Os06g0294600","LOC_Os06g19070.1",3.268258,1.6061635,3.659902,2.8447745,0.013667275,1549,0.013667275,0.019309399152331,0.0353902130568108,"Yes"]
["Os07g0160100","Os07g0160100","LOC_Os07g06620.1",1.9722118,2.9702568,3.6019874,2.8481522,0.027427651,2554,0.027427651,0.0318374470206931,0.0430745137670321,"Yes"]
["Os03g0271500","Os03g0271500","LOC_Os03g16470.1",3.0922914,1.7642741,3.6920457,2.849537,0.010029459,1233,0.010029459,0.0153702318623784,0.0326262449708029,"Yes"]
["GT_Os_A_Specific_0014905","Os09g0128750","None",3.510172,1.9338808,3.115706,2.8532531,0.018900463,1968,0.018900463,0.0245325355272999,0.0385212180350609,"Yes"]
["GT_Os_A_Specific_0102264","Os05g0190000","LOC_Os05g09728.1",2.4034443,2.25287,3.9075193,2.8546112,0.020112403,2063,0.020112403,0.0257167788581401,0.0391036589592826,"Yes"]
["Os07g0212200","Os07g0212200","LOC_Os07g11110.1",2.8872604,2.0388136,3.644496,2.8568566,0.015559029,1705,0.015559029,0.0212540513587634,0.0366025016533724,"Yes"]
["Os10g0208500","Os10g0208500","LOC_Os10g14180.1",2.3013716,2.8870015,3.3884678,2.858947,0.0008359178,119,0.000835918,1.48342059336823E-3,0.0281753537647058,"Yes"]
["GT_Os_A_Specific_0021196","Os08g0346001","None",2.9875536,2.6360397,2.961357,2.8616502,0.0010376854,152,1.037685E-3,0.0018947893293443,0.027382595625,"Yes"]
["Os02g0182600","Os02g0182600","LOC_Os02g08530.1",2.276538,2.7623472,3.551423,2.863436,0.006853211,899,0.006853211,0.0112066816255297,0.0305764508576195,"Yes"]
["Os04g0623800","Os04g0623800","LOC_Os04g53230.1",3.8096676,1.6383467,3.1487446,2.8655863,0.022023672,2206,0.022023672,0.0274993767140364,0.040043947593835,"Yes"]
["Os04g0161100","Os04g0161100","LOC_Os04g07890.1",3.0509338,2.455687,3.0931463,2.8665893,0.020176113,2071,0.020176113,0.0258165046123161,0.0390759967373249,"Yes"]
["Os07g0407900","Os07g0407900","LOC_Os07g22510.1",2.3496642,3.0699363,3.187711,2.8691037,0.003861446,532,0.003861446,0.00663176265270506,0.0291132705,"Yes"]
["Os06g0654600","Os06g0654600","LOC_Os06g44430.1",2.7691631,2.633531,3.212495,2.8717299,0.028170004,2599,0.028170004,0.0323984043879331,0.0434743693897652,"Yes"]
["Os12g0571700","Os12g0571700","LOC_Os12g38360.1",1.9738708,2.487349,4.163283,2.874834,0.014850318,1649,0.014850318,0.0205559710795312,0.0361216649472407,"Yes"]
["Os04g0462300","Os04g0462300","LOC_Os04g38850.1",2.393879,2.4354901,3.8183866,2.8825853,0.0037516253,522,0.003751625,0.00650710545998504,0.0288271415229885,"Yes"]
["Os07g0663600","Os07g0663600","LOC_Os07g46840.1",3.5862575,2.083529,2.9815826,2.8837898,0.0054356907,739,0.005435691,0.00921216654200947,0.0295027829512855,"Yes"]
["Os05g0191700","Os05g0191700","LOC_Os05g10330.1",3.3654242,2.195878,3.0949368,2.885413,0.004463683,617,0.004463683,0.00769134879082523,0.0290175567471636,"Yes"]
["Os04g0580400","Os04g0580400","LOC_Os04g49130.1",2.32051,2.8874655,3.453637,2.8872042,0.000956752,136,0.000956752,0.00169533782099227,0.0282171490588235,"Yes"]
["Os04g0228100","Os04g0228100","LOC_Os04g15800.1",1.9522233,3.5621305,3.152513,2.8889554,0.0056898883,766,0.005689888,0.00954874096235352,0.0297939174516971,"Yes"]
["Os06g0233800","Os06g0233800","LOC_Os06g12740.1",2.2186985,3.085424,3.371735,2.8919525,0.022374064,2228,0.022374064,0.0277736225380204,0.0402793405314183,"Yes"]
["Os02g0660100","Os02g0660100","LOC_Os02g44155.1",2.4727378,2.7643895,3.4394488,2.8921921,0.0019694236,276,1.969424E-3,0.00344053851907255,0.028620868347826,"Yes"]
["Os09g0423500","Os09g0423500","LOC_Os09g25570.1",1.9302077,2.7526908,3.9950838,2.8926609,0.011882737,1399,0.011882737,0.0174395412615307,0.034068376059328,"Yes"]
["Os_A_Specific_0107939","Os07g0494300","LOC_Os07g31210.1",4.639559,1.190136,2.8522806,2.8939917,0.041891605,3383,0.041891605,0.0421715282971827,0.0496681134067395,"Yes"]
["Os08g0102700","Os08g0102700","LOC_Os08g01220.1",2.0952668,2.9077191,3.6878228,2.8969364,0.008407205,1063,0.008407205,0.0132510595861381,0.031722765056444,"Yes"]
["Os07g0510900","Os07g0510900","LOC_Os07g32660.1",2.74644,2.307456,3.6439724,2.8992894,0.002017667,285,0.002017667,0.00355272999252056,0.0283960082,"Yes"]
["Os07g0105600","Os07g0105600","LOC_Os07g01480.1",3.2823062,1.9716506,3.4476924,2.9005497,0.015319576,1682,0.015319576,0.0209673398155073,0.0365319972271105,"Yes"]
["Os03g0751400","Os03g0751400","LOC_Os03g54040.1",2.1727004,2.1469188,4.388844,2.9028213,0.02752571,2561,0.02752571,0.0319247070555971,0.0431103564271768,"Yes"]
["Os05g0369900","Os05g0369900","LOC_Os05g30700.1",3.1861033,2.2885432,3.2345943,2.9030802,0.010498606,1278,0.010498606,0.0159311892296185,0.0329498502863849,"Yes"]
["Os03g0259600","Os03g0259600","LOC_Os03g15380.1",2.8873787,2.5467386,3.2764726,2.9035301,0.003968833,554,0.003968833,0.0069060084766891,0.0287346374783393,"Yes"]
["Os04g0511400","Os04g0511400","LOC_Os04g43210.1",2.9925833,2.6760554,3.076909,2.9151828,0.00094396394,133,0.000943964,0.00165794066317626,0.0284679669473684,"Yes"]
["GT_Os_A_Specific_0116354","Os06g0729000","LOC_Os06g51290.1",3.4146686,2.2325864,3.1069627,2.9180725,0.011108499,1070,0.008449075,0.0133383196210421,0.0316721867523364,"Yes"]
["Os08g0556900","Os08g0556900","LOC_Os08g44270.1",2.6269045,2.5203953,3.6090403,2.91878,2.2216819E-3,310,2.221682E-3,0.00386437297432061,0.0287456983935483,"Yes"]
["Os07g0691200","Os07g0691200","LOC_Os07g49110.1",3.892335,1.8490229,3.0185652,2.9199743,0.014792434,1646,0.014792434,0.0205185739217152,0.0360464476148238,"Yes"]
["Os02g0750100","Os02g0750100","LOC_Os02g51470.1",3.4475899,1.977457,3.3481398,2.9243956,0.010834181,1308,0.010834181,0.0163051608077786,0.0332231651307339,"Yes"]
["Os03g0175800","Os03g0175800","LOC_Os03g07920.1",2.0251145,3.0336733,3.72017,2.9263191,0.004233897,581,0.004233897,0.00724258289703316,0.0292291925421686,"Yes"]
["Os05g0247100","Os05g0247100","LOC_Os05g15770.1",3.3289604,2.8954372,2.5558844,2.9267607,0.005174911,703,0.005174911,0.0087634006482174,0.0295257013100995,"Yes"]
["GT_Os_A_Specific_0070882","Os01g0652100","LOC_Os01g46350.1",3.6272764,2.2771318,2.8783255,2.927578,0.032141037,482,0.003479065,0.00600847668910496,0.0289513064626556,"Yes"]
["Os01g0607800","Os01g0607800","LOC_Os01g42280.1",2.6179452,2.4356966,3.736833,2.9301584,0.005591829,756,0.005591829,0.00942408376963351,0.0296677594166666,"Yes"]
["GT_Os_A_Specific_0230709","Os01g0613100","LOC_Os01g42760.1",3.6487494,1.6283112,3.5241451,2.9337351,0.027567614,2566,0.027567614,0.0319870356519571,0.0430918549314107,"Yes"]
["Os07g0656500","Os07g0656500","LOC_Os07g46310.1",3.5943775,1.9278078,3.2795124,2.9338992,0.023592308,2311,0.023592308,0.0288082772375966,0.0409470996919082,"Yes"]
["Os07g0121400","Os06g0695500","LOC_Os06g48030.1",2.9053483,3.5231633,2.3752275,2.9345798,0.021072937,2673,0.029436504,0.0333208676140613,0.0441712748013468,"Yes"]
["Os02g0669700","Os02g0669700","LOC_Os02g44890.1",2.7870345,2.5069432,3.516951,2.9369762,0.0075143618,966,0.007514362,0.0120418848167539,0.0312009378695652,"Yes"]
["Os05g0123300","Os05g0123300","LOC_Os05g03200.1",3.1004658,2.4522972,3.268352,2.9403718,0.009732268,1201,0.009732268,0.0149713288456743,0.0325030199400499,"Yes"]
["Os01g0778500","Os01g0778500","LOC_Os01g57050.1",1.9527917,2.8624039,4.0103474,2.9418476,0.039462287,3258,0.039462287,0.0406133133881825,0.0485829444926335,"Yes"]
["Os07g0191600","Os07g0191600","LOC_Os07g09384.1",3.2518945,2.0011392,3.5733767,2.9421368,4.286163E-3,588,4.286163E-3,0.00732984293193717,0.0292377547499999,"Yes"]
["Os05g0472400","Os05g0472400","LOC_Os05g39540.1",2.8092833,2.319408,3.7063966,2.9450293,5.028706E-3,689,5.028706E-3,0.00858888057840937,0.029274513448476,"Yes"]
["Os01g0652000","Os01g0652000","LOC_Os01g46340.1",3.00345,2.8711357,2.9721656,2.9489172,9.51333e-07,1,9.51333e-07,1.24657192720019E-5,0.00381579666299999,"Yes"]
["Os04g0115700","Os04g0115700","LOC_Os04g02530.1",2.2530518,2.8270645,3.766756,2.9489574,0.0041062483,563,0.004106248,0.00701819995013712,0.0292542819325044,"Yes"]
["GT_Os_A_Specific_0074951","Os03g0149700","LOC_Os03g05560.1",2.2376552,2.1879756,4.428971,2.9515336,0.018548109,1942,0.018548109,0.0242084268262278,0.0383091993815654,"Yes"]
["Os04g0375900","Os04g0375900","LOC_Os04g30720.1",2.4151096,3.2074332,3.2328467,2.9517965,0.0030207445,416,3.020745E-3,5.18573921715282E-3,0.02912550046875,"Yes"]
["Os12g0604700","Os12g0604700","LOC_Os12g41180.1",2.9651651,2.892476,3.0015016,2.9530475,0.009326277,1167,0.009326277,0.0145474943904263,0.0320545818740359,"Yes"]
["Os02g0158100","Os02g0158100","LOC_Os02g06340.1",2.1747885,3.416871,3.2687287,2.9534626,0.0029494436,410,0.002949444,0.00511094490152081,0.0288541948390243,"Yes"]
["Os_A_Specific_0064302","Os06g0679500","LOC_Os06g46570.1",2.7058015,2.3026133,3.8582802,2.9555652,0.039844662,3283,0.039844662,0.0409249563699825,0.0486801520810234,"Yes"]
["Os01g0111900","Os01g0111900","LOC_Os01g02150.1",1.6483679,2.728466,4.5107203,2.962518,0.02915851,2651,0.02915851,0.0330466217900772,0.044117232595247,"Yes"]
["GT_Os_A_Specific_0108865","Os12g0420400","LOC_Os12g23200.1",3.6952734,2.1691704,3.0340977,2.9661806,0.00760211,3349,0.041199353,0.0417476938419346,0.0493432681048074,"Yes"]
["Os06g0231400","Os06g0231400","None",1.313384,3.0453725,4.540667,2.9664745,0.037337083,3145,0.037337083,0.0392046871104462,0.0476181366972973,"Yes"]
["Os05g0551100","Os05g0551100","LOC_Os05g47790.1",2.761007,2.9655008,3.174984,2.967164,0.0067734276,886,0.006773428,0.0110446272749937,0.0306639048623024,"Yes"]
["GT_Os_A_Specific_0019418","Os04g0602100","LOC_Os04g51300.1",3.6700525,2.0403605,3.1911001,2.967171,0.014181864,1791,0.016573504,0.0223261032161555,0.0371168757922948,"Yes"]
["Os06g0484500","Os06g0484500","LOC_Os06g28950.1",2.6738214,2.364605,3.8664694,2.9682987,0.006800898,893,0.006800898,0.0111318873098977,0.0305469225957446,"Yes"]
["Os01g0378100","Os01g0378100","LOC_Os01g28030.1",2.976088,1.7869911,4.154945,2.9726746,0.033750866,2950,0.033750866,0.0367738718524058,0.0458897367884745,"Yes"]
["GT_Os_A_Specific_0162630","Os02g0595700","LOC_Os02g38210.1",3.194252,2.1970577,3.5515232,2.9809444,0.004463098,1337,0.011107867,0.0166666666666666,0.033323601,"Yes"]
["Os07g0626800","Os07g0626800","LOC_Os07g43370.1",2.3878212,2.6624513,3.898459,2.9829104,0.008262923,1048,0.008262923,0.013064073797058,0.0316246031994274,"Yes"]
["Os01g0741200","Os01g0741200","LOC_Os01g53840.1",3.4367316,1.8596492,3.6595445,2.9853084,0.006838276,897,0.006838276,0.0111817501869857,0.0305778428494983,"Yes"]
["Os03g0775700","Os03g0775700","LOC_Os03g56430.1",1.707406,3.5791826,3.6739025,2.9868305,0.017696356,1878,0.017696356,0.0234106207928197,0.0377955718402555,"Yes"]
["Os05g0155400","Os05g0155400","LOC_Os05g06340.1",2.2110438,3.2786546,3.4729161,2.987538,3.6326363E-3,502,0.003632636,0.006257791074545,0.0290249063665338,"Yes"]
["GT_Os_A_Specific_0016468","Os11g0112050","None",2.5832996,3.997672,2.3843985,2.9884567,0.0042087105,577,0.004208711,0.00719272001994515,0.029256741457539,"Yes"]
["Os_A_Specific_0003033","Os02g0698000","LOC_Os02g47020.1",3.7839236,2.1147408,3.079825,2.9928296,0.039501984,3262,0.039501984,0.0406631762652705,0.0485721820429184,"Yes"]
["Os05g0192100","Os05g0192100","LOC_Os05g10370.1",3.2452817,2.574452,3.162004,2.9939125,0.0054142033,733,0.005414203,0.00913737222637746,0.0296266960886766,"Yes"]
["Os03g0356300","Os03g0356300","LOC_Os03g24020.1",2.9181314,2.0830922,3.9889932,2.9967391,0.007159166,928,0.007159166,0.0115681874844178,0.0309433349418103,"Yes"]
["GT_Os_A_Specific_0300877","Os08g0566400","LOC_Os08g45180.1",3.3692307,2.3881726,3.2332048,2.9968693,0.0141193345,470,0.003365587,0.00585888805784093,0.028722062674468,"Yes"]
["Os03g0178200","Os03g0178200","LOC_Os03g08080.1",2.1326222,2.428927,4.4393125,3.0002873,0.020315569,2087,0.020315569,0.0260159561206681,0.0390444404690943,"Yes"]
["Os02g0581100","Os02g0581100","LOC_Os02g37060.1",3.7321835,2.1670055,3.1112738,3.0034876,0.016524976,1783,0.016524976,0.0222263774619795,0.0371742449444756,"Yes"]
["Os06g0725000","Os06g0725000","LOC_Os06g50930.1",3.3008928,2.6671839,3.0443745,3.0041504,0.0009596888,137,0.000959689,0.00170780354026427,0.028097172109489,"Yes"]
["GT_Os_A_Specific_0007764","Os03g0672500","LOC_Os03g46930.1",3.7008429,2.148984,3.1644611,3.0047626,0.004927045,676,0.004927045,0.00842682622787334,0.0292342862352071,"Yes"]
["Os02g0269200","Os02g0269200","LOC_Os02g16909.1",3.2430143,2.5074577,3.290329,3.0136003,0.0017200006,247,0.001720001,0.00307903266018449,0.0279308664412955,"Yes"]
["Os07g0642200","Os07g0642200","LOC_Os07g44780.1",2.6652136,2.9837646,3.3945007,3.014493,0.010140069,1240,0.010140069,0.0154574918972824,0.032799852225,"Yes"]
["Os07g0619800","Os07g0619800","LOC_Os07g42770.1",3.1174169,2.5020766,3.424799,3.014764,0.0034558633,478,3.455863E-3,5.95861381201695E-3,0.028998883876569,"Yes"]
["Os10g0371000","Os10g0371000","LOC_Os10g22590.1",2.8884091,2.3859859,3.771379,3.015258,0.019557273,2012,0.019557273,0.025081027175268,0.0389881819100397,"Yes"]
["Os07g0634900","Os07g0634900","LOC_Os07g44090.1",3.3638258,1.8488226,3.8420916,3.0182467,0.0069771386,915,0.006977139,0.0114061331338818,0.0305850322721311,"Yes"]
["Os04g0474500","Os04g0474500","LOC_Os04g39840.1",2.208395,2.956152,3.9177694,3.0274389,0.012491778,1443,0.012491778,0.0179880329094988,0.0347224681621621,"Yes"]
["Os02g0623300","Os02g0623300","LOC_Os02g41450.1",2.7451015,2.3060045,4.033039,3.0280483,0.013045638,1494,0.013045638,0.0186237845923709,0.0350241325421686,"Yes"]
["Os06g0148200","Os06g0148200","LOC_Os06g05550.1",4.5336585,1.5134311,3.0374355,3.028175,0.041750222,3376,0.041750222,0.0420842682622787,0.0496031221688388,"Yes"]
["Os06g0334100","Os06g0334100","None",3.0041757,3.0610838,3.019995,3.0284183,8.654386E-3,1092,8.654386E-3,0.0136125654450261,0.0317882254999999,"Yes"]
["Os04g0691600","Os04g0691600","LOC_Os04g59494.1",3.229477,2.0674782,3.797882,3.0316124,0.007779325,997,0.007779325,0.0124283221141859,0.0312967628635907,"Yes"]
["Os01g0875000","Os01g0875000","LOC_Os01g65420.1",2.8389359,2.7022643,3.566628,3.0359428,0.01488287,1654,0.01488287,0.0206182996758913,0.0360914096553808,"Yes"]
["Os02g0731600","Os02g0731600","LOC_Os02g49870.1",3.383212,2.148366,3.5913534,3.0409772,0.021422926,2159,0.021422926,0.0269134879082523,0.0397996091644279,"Yes"]
["GT_Os_A_Specific_0337530","Os03g0359600","LOC_Os03g24510.1",3.3687887,2.0849814,3.6721964,3.041989,0.0058192895,784,0.00581929,0.00977312390924956,0.0297719033035714,"Yes"]
["Os03g0807100","Os03g0807100","LOC_Os03g59240.1",3.3757896,1.9378514,3.8216658,3.0451024,0.0069318516,908,0.006931852,0.0113188730989778,0.0306207691321585,"Yes"]
["Os06g0571800","Os06g0571800","LOC_Os06g37450.1",3.8889856,1.6951361,3.55682,3.0469806,0.025520723,2432,0.025520723,0.0303166292695088,0.0420903042569901,"Yes"]
["Os04g0649200","Os04g0649200","LOC_Os04g55570.1",3.2984161,3.0884676,2.75595,3.0476112,0.00028077624,44,2.80776E-4,0.000548491647968087,0.0255952849090909,"Yes"]
["Os07g0664600","Os07g0664600","LOC_Os07g46950.2",2.9049401,3.4201665,2.8351932,3.0534332,0.022002308,2205,0.022002308,0.0274869109947644,0.0400232459809523,"Yes"]
["GT_Os_A_Specific_0210713","Os10g0467850","None",2.2355938,3.103091,3.8258095,3.0548315,0.018732954,1956,0.018732954,0.0243829468960359,0.0384140483098159,"Yes"]
["Os01g0917700","Os01g0917700","LOC_Os01g68890.1",2.4861965,3.166936,3.5116334,3.054922,0.0017168471,246,0.001716847,3.06656694091249E-3,0.0279929809634146,"Yes"]
["Os03g0563300","Os03g0563300","LOC_Os03g36540.1",3.3382978,2.034236,3.8086576,3.0603971,0.008330647,1051,0.008330647,0.013101470954874,0.0317927926898192,"Yes"]
["Os01g0896200","Os01g0896200","LOC_Os01g67090.1",1.3373666,3.2698011,4.575837,3.0610015,0.036825407,3116,0.036825407,0.0388431812515582,0.0474026660709242,"Yes"]
["Os02g0694800","Os02g0694800","LOC_Os02g46750.1",3.1671042,2.647027,3.37914,3.0644238,0.0053593875,725,0.005359388,0.00903764647220144,0.0296503520937931,"Yes"]
["Os_A_Specific_0107525","Os03g0101250","None",2.1454887,2.383668,4.6755853,3.0682476,0.03919295,3237,0.03919295,0.0403515332834704,0.0485643875347544,"Yes"]
["Os01g0651800","Os01g0651800","LOC_Os01g46290.1",2.3037286,3.7469473,3.1712012,3.073959,0.015783932,1724,0.015783932,0.0214909000249314,0.0367223615150812,"Yes"]
["Os11g0202300","Os11g0202300","LOC_Os11g09680.1",3.9528208,2.3100114,2.9666047,3.076479,0.018053578,1897,0.018053578,0.0236474694589877,0.0381723254391143,"Yes"]
["Os02g0747400","Os02g0747400","LOC_Os02g51280.1",2.5533395,2.5433292,4.1408963,3.0791883,0.023956617,2346,0.023956617,0.0292445774121166,0.0409590753567774,"Yes"]
["Os03g0765900","Os03g0765900","LOC_Os03g55720.1",3.8970776,2.2676983,3.0763588,3.0803783,0.008382393,1057,0.008382393,0.0131762652705061,0.0318086833708609,"Yes"]
["Os02g0792000","Os02g0792000","LOC_Os02g54920.1",2.6085668,2.8001528,3.833003,3.080574,0.0013355294,200,1.335529E-3,2.49314385440039E-3,0.026784034095,"Yes"]
["Os03g0828100","Os03g0828100","LOC_Os03g61260.1",3.1293516,2.15514,3.9773073,3.0872662,0.0067182234,875,0.006718223,0.0109075043630017,0.0307963342319999,"Yes"]
["Os05g0242400","Os05g0242400","LOC_Os05g15280.1",3.6526384,2.10962,3.4995728,3.0872772,0.027531864,2562,0.027531864,0.0319371727748691,0.0431031641311475,"Yes"]
["Os11g0482400","Os11g0482400","LOC_Os11g29230.1",2.3015165,2.8361006,4.1296573,3.0890915,0.035214067,3023,0.035214067,0.037683869359262,0.046722997928217,"Yes"]
["Os03g0121700","Os03g0121700","LOC_Os03g02960.1",3.50109,2.336666,3.431816,3.0898573,0.0057262527,770,0.005726253,0.00959860383944153,0.0298285724454545,"Yes"]
["GT_Os_A_Specific_0052580","Os05g0241200","LOC_Os05g15160.1",3.5444026,2.4944339,3.231907,3.0902479,0.004491972,620,0.004491972,0.00772874594864123,0.0290601607935483,"Yes"]
["Os01g0864700","Os01g0864700","LOC_Os01g64490.1",2.6895008,2.9357424,3.6572542,3.0941658,0.012179716,1424,0.012179716,0.0177511842433308,0.0343067702780898,"Yes"]
["Os05g0386900","Os05g0386900","LOC_Os05g32120.1",3.058455,2.7992482,3.4357576,3.0978203,0.0011986569,181,0.001198657,2.25629518823236E-3,0.0265625040165745,"Yes"]
["Os03g0216700","Os03g0216700","LOC_Os03g11734.1",2.8922057,2.7905893,3.6202865,3.1010273,0.018086374,1900,0.018086374,0.0236848666168037,0.038181287428421,"Yes"]
["Os06g0641500","Os06g0641500","LOC_Os06g43410.1",3.8553114,1.5983276,3.853249,3.102296,0.026894605,2522,0.026894605,0.031438544003989,0.0427732992287866,"Yes"]
["GT_Os_A_Specific_0120795","Os02g0259600","LOC_Os02g15900.1",3.0308547,2.262158,4.0619245,3.1183121,0.009020041,1668,0.015158654,0.0207928197456993,0.0364516553920863,"Yes"]
["Os07g0532500","Os07g0532500","LOC_Os07g34830.1",3.206872,2.2337952,3.916532,3.1190662,0.040347755,3309,0.040347755,0.0412490650710546,0.0489074781822302,"Yes"]
["Os01g0360200","Os01g0360200","LOC_Os01g25820.1",3.0138721,2.9454565,3.4047108,3.1213465,3.6068235e-05,11,3.60682e-05,0.000137122911992021,0.013151777290909,"Yes"]
["Os05g0363500","Os05g0363500","LOC_Os05g30010.1",3.47408,2.342702,3.54736,3.1213806,0.002534207,353,0.002534207,0.0044003989030167,0.0287951962521246,"Yes"]
["Os12g0572000","Os12g0572000","LOC_Os12g38400.2",2.2701235,3.413362,3.686511,3.1233323,0.012077628,1415,0.012077628,0.0176389927698828,0.034235594281272,"Yes"]
["Os05g0587300","Os05g0587300","LOC_Os05g50990.1",2.9155254,3.6833963,2.7718458,3.1235893,0.012888827,1479,0.012888827,0.0184367988032909,0.0349540805253549,"Yes"]
["Os06g0703400","Os06g0703400","None",3.2724886,2.7978172,3.3063312,3.1255455,0.0003288145,53,0.000328815,0.000660683121416105,0.0248844710377358,"Yes"]
["Os06g0549300","Os06g0549300","LOC_Os06g35630.1",3.2933874,2.7710776,3.3183904,3.1276186,0.00038460142,60,0.000384601,7.47943156320119E-4,0.0257105768499999,"Yes"]
["Os05g0594500","Os05g0594500","LOC_Os05g51620.1",3.1479554,2.644823,3.5901322,3.127637,0.0043837037,602,0.004383704,0.0075043630017452,0.0292077022325581,"Yes"]
["Os06g0132400","Os06g0132400","LOC_Os06g04150.1",2.8598213,2.0292482,4.497705,3.1289246,0.016197845,1756,0.016197845,0.0218898030416355,0.036998608368451,"Yes"]
["Os01g0645200","Os01g0645200","LOC_Os01g45750.1",3.2734532,2.3194938,3.7974548,3.1301339,0.016672555,1800,0.016672555,0.0224382946896035,0.0371520100583333,"Yes"]
["Os05g0191500","Os05g0191500","LOC_Os05g10310.1",2.74612,3.3620734,3.2872767,3.1318233,3.1906748E-3,444,3.190675E-3,0.00553477935676888,0.0288238680743243,"Yes"]
["Os07g0676600","Os07g0676600","LOC_Os07g47960.1",3.6412144,2.259028,3.4964266,3.1322231,0.00871969,1105,0.00871969,0.0137746197955622,0.0316512910316742,"Yes"]
["Os10g0389800","Os10g0389800","LOC_Os10g25090.1",1.840302,3.7829757,3.7804275,3.1345685,0.007852691,1005,0.007852691,0.012528047868362,0.0313404413940298,"Yes"]
["Os01g0882500","Os01g0882500","LOC_Os01g66000.1",3.5792875,2.2646103,3.5668793,3.1369257,0.01010222,1239,0.01010222,0.0154450261780104,0.0327037969491525,"Yes"]
["Os12g0144200","Os12g0144200","LOC_Os12g05010.1",3.485324,3.094388,2.863905,3.1478722,0.010505472,1279,0.010505472,0.0159436549488905,0.0329456201657544,"Yes"]
["Os03g0206100","Os03g0206100","LOC_Os03g10820.1",2.2342143,3.0731645,4.1525064,3.1532948,0.010784099,1301,0.010784099,0.0162179007728745,0.0332475181314373,"Yes"]
["Os01g0698900","Os01g0698900","LOC_Os01g50360.1",3.4981666,2.4302335,3.556293,3.1615646,0.005622056,762,0.005622056,0.00949887808526552,0.0295932632755905,"Yes"]
["Os01g0621200","Os01g0621200","LOC_Os01g43320.1",2.958418,3.6286578,2.8976407,3.1615722,0.002382817,325,0.002382817,0.00405135876340064,0.0294076276523076,"Yes"]
["GT_Os_A_Specific_0014356","Os05g0375400","LOC_Os05g31140.1",3.3528914,3.3752394,2.757886,3.1620057,0.0053151986,778,0.005781804,0.00969832959361755,0.0298082465861182,"Yes"]
["GT_Os_A_Specific_0171027","Os08g0242700","LOC_Os08g14440.1",3.7992897,2.2339888,3.4555826,3.1629536,0.009896559,1221,0.009896559,0.0152206432311144,0.0325103178943488,"Yes"]
["GT_Os_A_Specific_0023420","Os04g0626400","LOC_Os04g53490.1",3.4115348,2.4410863,3.641199,3.1646068,3.4491138E-3,656,0.004784517,0.0081775118424333,0.0292541123277439,"Yes"]
["Os07g0148900","Os07g0148900","LOC_Os07g05480.1",3.8115826,2.3530207,3.345026,3.1698763,0.019789742,2034,0.019789742,0.025355272999252,0.0390249042094395,"Yes"]
["Os07g0681200","Os07g0681200","LOC_Os07g48320.1",2.1744218,3.244842,4.0997777,3.1730137,0.0064152847,835,0.006415285,0.0104088755921216,0.0308164169281437,"Yes"]
["Os01g0756900","Os01g0756900","LOC_Os01g55220.1",2.6389222,3.6286597,3.2526565,3.173413,0.01246784,1441,0.01246784,0.0179631014709548,0.0347040293129771,"Yes"]
["Os05g0168800","Os05g0168800","LOC_Os05g07680.1",2.7431893,2.9747505,3.8060813,3.1746738,0.006384318,830,0.006384318,0.0103465469957616,0.0308524090337349,"Yes"]
["Os03g0100800","Os03g0100800","LOC_Os03g01120.1",3.2276354,2.549292,3.7496572,3.1755283,1.2085115E-3,184,0.001208512,0.00229369234604836,0.026344248,"Yes"]
["GT_Os_A_Specific_0011012","Os07g0513000","LOC_Os07g32880.1",3.6649747,2.2440948,3.6252513,3.178107,0.004508259,1360,0.011422188,0.0169533782099227,0.0336870559323529,"Yes"]
["GT_Os_A_Specific_0011710","Os09g0537700","LOC_Os09g36680.1",3.1799793,2.920751,3.440682,3.1804707,0.015655214,1457,0.012658998,0.0181625529793069,0.0348491701976664,"Yes"]
["Os01g0755500","Os01g0755500","LOC_Os01g55100.1",3.7203202,2.3367906,3.5094485,3.188853,0.0031090735,432,0.003109074,5.38519072550486E-3,0.0288668884583333,"Yes"]
["Os03g0146800","Os03g0146800","LOC_Os03g05334.1",2.0301309,2.685821,4.852489,3.1894805,0.02033395,2088,0.02033395,0.0260284218399401,0.0390610505028735,"Yes"]
["Os01g0101200","Os01g0101200","LOC_Os01g01120.1",3.6934814,2.5766068,3.3115578,3.193882,0.008667373,1096,0.008667373,0.0136624283221141,0.0317197382326642,"Yes"]
["Os07g0424400","Os07g0424400","LOC_Os07g24190.1",2.5191007,3.2297783,3.8338661,3.1942482,0.004583379,635,0.004583379,0.00791573173772126,0.0289510758566929,"Yes"]
["GT_Os_A_Specific_0471860","Os08g0498400","LOC_Os08g38910.1",3.625506,2.72508,3.2442207,3.198269,0.008576889,3038,0.035422187,0.037870855148342,0.0467670809930875,"Yes"]
["Os06g0196300","Os06g0196300","LOC_Os06g09610.1",3.748742,2.332571,3.5174828,3.1995986,0.008586897,1087,0.008586897,0.0135502368486661,0.0316854129411223,"Yes"]
["Os10g0109900","Os10g0109900","LOC_Os10g02100.1",2.5274415,3.1017165,3.9748325,3.2013302,0.0022738548,319,2.273855E-3,0.00397656444776863,0.0285906971943573,"Yes"]
["Os06g0187500","Os06g0187500","LOC_Os06g08830.1",2.3565116,3.8379016,3.4131088,3.2025073,6.798686E-3,891,6.798686E-3,0.0111069558713537,0.0306055325993266,"Yes"]
["Os02g0834700","Os02g0834700","LOC_Os02g58790.1",3.6115274,2.2597914,3.736596,3.2026384,0.004592898,636,0.004592898,0.00792819745699327,0.0289655878584905,"Yes"]
["Os08g0561700","Os08g0561700","LOC_Os08g44770.1",3.0522137,2.552188,4.0148964,3.2064326,0.0023270154,323,2.327015E-3,0.00402642732485664,0.0288967714086687,"Yes"]
["Os07g0229700","Os07g0229700","LOC_Os07g12630.1",2.7904167,2.6706843,4.1632266,3.2081091,0.0033869275,475,3.386928E-3,0.00592121665420094,0.0285999330694736,"Yes"]
["Os02g0740400","Os02g0740400","LOC_Os02g50690.1",2.6899033,2.7772436,4.168103,3.21175,0.0027608988,391,0.002760899,0.00487409623535278,0.0283221633989769,"Yes"]
["Os03g0161400","Os03g0161400","LOC_Os03g06570.1",2.3501043,3.0544596,4.2309914,3.2118518,0.014320495,1607,0.014320495,0.0200324108701072,0.0357433139047915,"Yes"]
["Os03g0413000","Os03g0413000","LOC_Os03g29970.1",3.6735754,2.4737406,3.5030913,3.2168026,0.0016760868,238,0.001676087,2.96684118673647E-3,0.028246995617647,"Yes"]
["GT_Os_A_Specific_0129745","Os04g0160600","LOC_Os04g07830.1",2.8679514,3.0739288,3.7119632,3.2179477,0.03884295,3221,0.03884295,0.0401520817751184,0.0483697834368208,"Yes"]
["Os05g0563000","Os05g0563000","LOC_Os05g48850.1",2.37644,2.834608,4.4429054,3.2179844,0.008422126,1065,0.008422126,0.0132759910246821,0.0317193872169014,"Yes"]
["Os02g0833900","Os02g0833900","LOC_Os02g58720.1",1.5840139,2.9091134,5.166922,3.2200165,0.03205411,2855,0.03205411,0.0355896285215656,0.0450329370262697,"Yes"]
["Os09g0423300","Os09g0423300","LOC_Os09g25550.1",3.8204536,2.292544,3.5720587,3.2283523,2.3970653E-3,327,0.002397065,4.07629020194465E-3,0.0294025312385321,"Yes"]
["Os01g0875500","Os01g0875500","LOC_Os01g65460.1",4.2265897,2.0266137,3.4327247,3.2286427,0.0547887,2799,0.031202005,0.0348915482423335,0.0447128410342979,"Yes"]
["Os01g0875300","Os01g0875300","LOC_Os01g65440.1",4.048007,1.902329,3.7373323,3.2292225,0.010184927,1243,0.010184927,0.0154948890550984,0.0328654402228479,"Yes"]
["Os08g0402700","Os08g0402700","LOC_Os08g31120.1",3.492865,2.1809855,4.0147963,3.2295487,0.0066643013,869,0.006664301,0.0108327100473697,0.0307600820609896,"Yes"]
["GT_Os_A_Specific_0062377","Os06g0729650","None",3.5838861,2.419838,3.6865988,3.2301075,0.008610819,1089,0.008610819,0.0135751682872101,0.0317153305867768,"Yes"]
["Os09g0481600","Os09g0481600","LOC_Os09g30380.1",3.2484727,2.991468,3.4534268,3.2311223,0.0020647044,291,0.002064704,0.00362752430815258,0.0284588582268041,"Yes"]
["Os10g0110800","Os10g0110800","LOC_Os10g02220.1",2.3102112,3.352499,4.0317235,3.2314777,0.003675136,512,0.003675136,0.00638244826726502,0.028790958,"Yes"]
["Os07g0659500","Os07g0659500","LOC_Os07g46540.1",2.7363691,3.680748,3.2916973,3.2362716,0.013142297,1505,0.013142297,0.018760907504363,0.0350257496790697,"Yes"]
["Os03g0222600","Os03g0222600","LOC_Os03g12230.1",3.229969,3.395317,3.087304,3.23753,1.1408956E-3,167,1.140896E-3,0.00208177511842433,0.0274019991377245,"Yes"]
["Os05g0460500","Os05g0460500","None",3.0747094,2.7095304,3.9319115,3.238717,0.0029039453,405,0.002903945,5.0486163051608E-3,0.0287598108518518,"Yes"]
["Os01g0805600","Os01g0805600","LOC_Os01g59120.1",2.1536608,3.9839115,3.5874407,3.2416708,0.006080797,808,0.006080797,0.0100723011717776,0.0301857385730198,"Yes"]
["Os12g0548700","Os12g0548700","LOC_Os12g36240.1",2.2903748,3.7466564,3.6951532,3.2440615,0.010310893,1254,0.010310893,0.0156320119670905,0.0329800572751196,"Yes"]
["GT_Os_A_Specific_0367926","Os03g0781400","LOC_Os03g56869.1",3.565361,2.5753627,3.6198525,3.2535255,6.1015007E-3,692,0.005052883,0.00862627773622538,0.0292877365794797,"Yes"]
["Os09g0116900","Os09g0116900","None",2.1361961,4.1142797,3.524013,3.2581627,0.005869413,788,0.005869413,0.00982298678633757,0.0298759080494923,"Yes"]
["Os01g0177900","Os01g0177900","LOC_Os01g08260.1",3.6124964,3.19354,2.9914365,3.2658243,0.026695767,2503,0.026695767,0.0312016953378209,0.042779353350779,"Yes"]
["GT_Os_A_Specific_0004163","Os01g0625200","LOC_Os01g43580.1",2.8339994,3.7887993,3.1863184,3.2697058,7.0798425E-3,1223,0.009937893,0.0152455746696584,0.032592713673753,"Yes"]
["Os11g0181700","Os11g0181700","LOC_Os11g07922.1",3.19877,2.5233107,4.087252,3.2697775,0.012957267,1489,0.012957267,0.0185614559960109,0.0349036923687038,"Yes"]
["Os10g0133600","Os10g0133600","LOC_Os10g04450.1",2.7865677,3.2571564,3.7668543,3.2701929,0.019240217,1987,0.019240217,0.0247693841934679,0.0388387067876195,"Yes"]
["Os11g0116000","Os11g0116000","LOC_Os11g02400.1",3.2573996,3.3722897,3.182118,3.2706025,0.017424911,1859,0.017424911,0.0231737721266517,0.037596190436256,"Yes"]
["Os07g0501800","Os07g0501800","LOC_Os07g31840.1",2.9374914,3.6109428,3.2719717,3.2734687,1.6303583E-4,28,1.63036E-4,3.49040139616055E-4,0.023354907,"Yes"]
["GT_Os_A_Specific_0089139","Os02g0103850","None",4.14946,2.054534,3.6248937,3.276296,0.0141782,1600,0.0141782,0.0199451508352031,0.035542975125,"Yes"]
["Os06g0573600","Os06g0573600","LOC_Os06g37560.1",2.733285,2.696638,4.4033475,3.277757,0.005420736,737,0.005420736,0.00918723510346547,0.0295014546757123,"Yes"]
["Os05g0226300","Os05g0226300","LOC_Os05g13860.1",3.2110023,2.4588585,4.178332,3.2827308,0.018582242,1945,0.018582242,0.0242458239840438,0.0383205000832904,"Yes"]
["Os10g0427900","Os10g0427900","LOC_Os10g29240.1",3.1729584,2.6149015,4.06682,3.2848933,0.0064850114,847,0.006485011,0.0105584642233856,0.030710010768595,"Yes"]
["Os05g0589200","Os05g0589200","LOC_Os05g51150.1",2.9509587,3.2550864,3.6626558,3.289567,1.16569485E-4,21,1.16569E-4,0.000261780104712041,0.022264679,"Yes"]
["Os05g0199700","Os05g0199700","LOC_Os05g11064.1",3.382319,2.598394,3.8906016,3.2904384,1.0004749E-3,144,1.000475E-3,0.00179506357516828,0.0278673973958333,"Yes"]
["GT_Os_A_Specific_0037104","Os05g0291700","LOC_Os05g22614.1",3.624648,2.2940192,3.9527392,3.290469,0.013154259,1234,0.010046999,0.0153826975816504,0.0326568176572123,"Yes"]
["GT_Os_A_Specific_0173445","Os03g0261500","LOC_Os03g15480.1",5.0511394,1.5783825,3.2481508,3.2925575,0.031392407,2810,0.031392407,0.0350286711543256,0.0448095887818505,"Yes"]
["Os01g0180300","Os01g0180300","LOC_Os01g08510.1",3.0315366,2.8332067,4.0132523,3.2926652,3.2310968E-3,449,3.231097E-3,0.00559710795312889,0.0288639867861915,"Yes"]
["Os10g0213700","Os10g0213700","LOC_Os10g15300.1",3.0570707,2.8839865,3.9390984,3.2933853,0.005194601,706,0.005194601,0.00880079780603341,0.0295121028484419,"Yes"]
["Os10g0522800","Os10g0522800","LOC_Os10g37870.1",2.4701557,4.137486,3.2750254,3.2942226,0.017112268,1837,0.017112268,0.0228995263026676,0.0373638034556341,"Yes"]
["Os02g0750200","Os02g0750200","LOC_Os02g51470.1",3.5932865,2.496624,3.7933455,3.2944186,0.003382522,474,0.003382522,0.00590875093492894,0.0286229867974683,"Yes"]
["GT_Os_A_Specific_0027752","Os12g0189300","LOC_Os12g08760.1",2.7041397,3.0839438,4.0973997,3.295161,0.0056992113,2134,0.021098942,0.0266018449264522,0.0396569148837863,"Yes"]
["GT_Os_A_Specific_0016685","Os05g0372833","None",2.915843,2.3597755,4.6142282,3.2966156,0.008545949,1084,0.008545949,0.0135128396908501,0.0316215880433579,"Yes"]
["Os11g0197200","Os11g0197200","None",3.2160957,2.8272839,3.8558269,3.2997353,5.118231E-3,699,5.118231E-3,0.00871353777112939,0.029369419944206,"Yes"]
["Os01g0311300","Os01g0311300","None",2.561211,2.8049521,4.5344715,3.3002117,0.012426636,1437,0.012426636,0.0179132385938668,0.0346856207348642,"Yes"]
["Os01g0750500","Os01g0750500","LOC_Os01g54670.1",3.4685593,2.9782038,3.4566984,3.301154,0.00019663549,33,0.000196635,0.000411368735976065,0.0239000904545454,"Yes"]
["Os01g0956600","Os01g0956600","LOC_Os01g72650.1",3.0571766,3.285428,3.5727186,3.3051078,0.0037572514,523,0.003757251,0.00651957117925704,0.0288151697151051,"Yes"]
["Os08g0473900","Os08g0473900","LOC_Os08g36910.1",3.299181,3.3346472,3.2825937,3.305474,1.1585985e-06,3,1.1586E-6,3.73971578160059e-05,1.5490482E-3,"Yes"]
["Os01g0144100","Os01g0144100","LOC_Os01g05080.1",2.6502118,2.8975773,4.37481,3.3075333,0.03110794,2792,0.03110794,0.0348042882074295,0.0446898092191977,"Yes"]
["Os07g0493100","Os07g0493100","LOC_Os07g31110.1",3.3086934,2.4718156,4.149945,3.3101513,0.008670987,1098,0.008670987,0.0136873597606581,0.0316751628934426,"Yes"]
["Os07g0684400","Os07g0684400","LOC_Os07g48520.1",2.7097883,3.3737497,3.8552036,3.312914,0.00866756,1097,0.00866756,0.0136748940413861,0.03169150698268,"Yes"]
["GT_Os_A_Specific_0477212","Os03g0129300","LOC_Os03g03720.1",4.048905,2.3289924,3.572206,3.3167012,0.009112566,1434,0.01229775,0.0178758414360508,0.0343976814853556,"Yes"]
["Os01g0755600","Os01g0755600","None",2.0238042,3.6749496,4.265696,3.3214834,0.012092126,1417,0.012092126,0.0176639242084268,0.0342283114932956,"Yes"]
["GT_Os_A_Specific_0014590","Os10g0326100","LOC_Os10g17890.1",3.3646593,2.6456075,3.9673567,3.3258743,0.02989934,2710,0.02989934,0.0337820992271254,0.0442532297933579,"Yes"]
["GT_Os_A_Specific_0010275","Os09g0286501","None",3.749083,2.6660962,3.5702848,3.328488,0.020796306,2116,0.020796306,0.0263774619795562,0.0394205970538752,"Yes"]
["Os07g0664500","Os07g0664500","LOC_Os07g46940.1",2.2682686,3.360538,4.3676176,3.3321412,0.009409932,1175,0.009409932,0.0146472201446023,0.0321219040442553,"Yes"]
["Os03g0323100","Os03g0323100","None",3.792254,2.3561091,3.8496127,3.3326588,0.019754212,2032,0.019754212,0.025330341560708,0.038993181265748,"Yes"]
["Os06g0671000","Os06g0671000","LOC_Os06g45940.1",1.8681583,3.5285697,4.6056767,3.334135,0.021361072,2151,0.021361072,0.0268137621540762,0.0398322918605299,"Yes"]
["Os09g0107900","Os09g0107900","None",3.610444,2.9303708,3.4624681,3.3344276,0.009284498,1162,0.009284498,0.0144851657940663,0.032048297313253,"Yes"]
["Os01g0639900","Os01g0639900","LOC_Os01g45274.1",4.0392513,2.4168167,3.5620317,3.3393667,4.51236E-3,624,4.51236E-3,0.00777860882572924,0.0290049294230769,"Yes"]
["Os01g0352100","Os01g0352100","LOC_Os01g25010.1",2.605103,2.8571248,4.5591254,3.340451,0.039738156,3275,0.039738156,0.0408252306158065,0.0486686240354198,"Yes"]
["Os01g0760000","Os01g0760000","LOC_Os01g55510.1",3.9382324,2.0489159,4.0372562,3.341468,0.010371268,1261,0.010371268,0.0157192720019945,0.0329890213703409,"Yes"]
["Os05g0454200","Os05g0454200","LOC_Os05g38000.1",2.0700278,3.9413757,4.0146008,3.3420017,0.01625708,1760,0.01625708,0.0219396659187235,0.037049515840909,"Yes"]
["Os04g0513900","Os04g0513900","LOC_Os04g43410.1",4.2812767,2.3737926,3.3714685,3.3421793,0.004233208,580,0.004233208,0.00723011717776115,0.0292748229103448,"Yes"]
["Os02g0810200","Os02g0810200","LOC_Os02g56540.1",2.0428357,4.1471825,3.8397188,3.3432457,0.016745333,1804,0.016745333,0.0224881575666916,0.037231447152439,"Yes"]
["Os05g0585400","Os05g0585400","LOC_Os05g50800.1",2.8377137,2.1747088,5.018535,3.3436527,0.01657307,1790,0.01657307,0.0223136374968835,0.0371366389776536,"Yes"]
["Os04g0119000","Os04g0119000","LOC_Os04g02880.1",3.4073849,2.5997534,4.0272264,3.3447883,0.008502619,1076,0.008502619,0.0134131139366741,0.0316951717555762,"Yes"]
["Os07g0505200","Os07g0505200","No hit",3.483457,2.4279842,4.12705,3.3461637,0.015948214,1736,0.015948214,0.0216404886561954,0.0368480912177419,"Yes"]
["Os10g0198300","Os10g0198300","None",3.0437374,2.4469948,4.578019,3.3562505,0.008606104,1088,0.008606104,0.0135627025679381,0.0317270984779411,"Yes"]
["Os02g0691500","Os02g0691500","LOC_Os02g46560.1",3.1370616,3.1098938,3.8477082,3.364888,0.006101912,811,0.006101912,0.0101096983295936,0.0301785068212083,"Yes"]
["Os01g0717400","Os01g0717400","LOC_Os01g51980.1",3.3272605,2.3455362,4.426019,3.366272,0.0052186716,710,0.005218672,0.00885066068312141,0.0294818216788732,"Yes"]
["GT_Os_A_Specific_0004138","Os04g0234600","LOC_Os04g16680.1",4.1468406,2.2849116,3.6692042,3.3669853,0.014221192,1570,0.013884057,0.0195711792570431,0.0354706704630573,"Yes"]
["Os02g0110200","Os02g0110200","LOC_Os02g02000.1",1.5390782,4.368316,4.19456,3.3673182,0.024328198,2366,0.024328198,0.0294938917975567,0.0412427735325443,"Yes"]
["Os10g0109300","Os10g0109300","LOC_Os10g02040.1",1.9806662,3.9909286,4.1397552,3.37045,0.01526954,1677,0.01526954,0.0209050112191473,0.0365212432558139,"Yes"]
["Os01g0166500","Os01g0166500","LOC_Os01g07240.1",4.2655234,1.6208,4.23565,3.373991,0.026133992,2473,0.026133992,0.0308277237596609,0.0423871580719773,"Yes"]
["Os05g0292800","Os05g0292800","LOC_Os05g22730.1",4.071433,2.3906717,3.6604462,3.3741837,2.6997426E-3,382,0.002699743,0.00476190476190476,0.0283473015,"Yes"]
["Os03g0666800","Os03g0666800","LOC_Os03g46420.1",3.4229202,2.3083043,4.4018035,3.377676,0.009741004,1205,0.009741004,0.0150211917227624,0.0324242050157676,"Yes"]
["Os10g0539600","Os10g0539600","LOC_Os10g39420.1",2.5278916,3.1255417,4.492714,3.3820488,5.359819E-3,726,5.359819E-3,0.00905011219147344,0.0296118925743801,"Yes"]
["Os03g0730500","Os03g0730500","LOC_Os03g52070.1",2.7311497,3.181416,4.239626,3.3840637,0.025003415,2405,0.025003415,0.0299800548491647,0.0417000821476091,"Yes"]
["Os05g0441400","Os05g0441400","LOC_Os05g36990.1",1.8655434,3.679163,4.616783,3.3871632,0.013139034,1504,0.013139034,0.018748441785091,0.0350403360199468,"Yes"]
["Os04g0293100","Os04g0293100","None",1.897387,3.525068,4.756839,3.3930979,0.014752533,1642,0.014752533,0.0204687110446272,0.0360367904159561,"Yes"]
["Os09g0346500","Os09g0346500","LOC_Os09g17740.1",3.1226683,3.1761074,3.8830214,3.3939323,0.027270405,2546,0.027270405,0.031737721266517,0.0429621345070699,"Yes"]
["Os04g0690500","Os04g0690500","LOC_Os04g59420.1",2.9641438,4.077688,3.1492212,3.3970177,0.034541085,2994,0.034541085,0.0373223635003739,0.0462739786022044,"Yes"]
["Os05g0163300","Os05g0163300","LOC_Os05g07060.1",2.65977,3.0813231,4.4563355,3.399143,0.017854238,1883,0.017854238,0.0234729493891797,0.0380315181189591,"Yes"]
["Os05g0455700","Os05g0455700","LOC_Os05g38170.1",2.3818498,2.9490576,4.8681927,3.3997002,0.010826052,1305,0.010826052,0.0162677636499626,0.0332745552275862,"Yes"]
["Os01g0284500","Os01g0284500","LOC_Os01g18170.1",2.8375034,3.8474965,3.5152361,3.4000788,0.028776757,2632,0.028776757,0.0328097731239092,0.0438539408537234,"Yes"]
["Os12g0501900","Os12g0501900","LOC_Os12g31770.1",3.2254252,2.29101,4.692974,3.4031365,0.01157199,1372,0.01157199,0.0171029668411867,0.0338303585204081,"Yes"]
["Os10g0492400","Os10g0492400","LOC_Os10g35040.1",4.561071,3.0395923,2.6178374,3.4061668,0.0049315356,677,0.004931536,0.00843929194714535,0.0292177118109305,"Yes"]
["Os03g0679700","Os03g0679700","LOC_Os03g47610.1",2.6171918,2.7202888,4.9000697,3.4125168,0.010086254,1238,0.010086254,0.0154325604587384,0.0326784852940226,"Yes"]
["Os10g0531900","Os10g0531900","LOC_Os10g38820.1",4.6633434,2.5056949,3.077116,3.415385,0.039645758,3269,0.039645758,0.0407504363001745,0.0486445810149892,"Yes"]
["Os01g0139000","Os01g0139000","LOC_Os01g04640.1",3.415597,3.0891147,3.7698264,3.424846,0.0040442673,557,0.004044267,0.00694340563450511,0.029123078881508,"Yes"]
["GT_Os_A_Specific_0077167","Os02g0726300","LOC_Os02g49440.1",3.7556024,2.7358623,3.8029904,3.431485,0.00826592,1033,0.008098141,0.012877088007978,0.0314439918209099,"Yes"]
["Os08g0323400","Os08g0323400","LOC_Os08g23410.1",2.9221187,3.2785845,4.1076174,3.436107,0.0034914145,485,0.003491415,0.00604587384692096,0.0288743619896907,"Yes"]
["Os03g0170500","Os03g0170500","LOC_Os03g07440.1",3.9419484,2.6538196,3.7206454,3.4388046,0.004887617,671,0.004887617,0.00836449763151333,0.0292164408152011,"Yes"]
["Os04g0390800","Os04g0390800","LOC_Os04g32080.1",2.7213354,3.4015357,4.1944056,3.4390924,0.040291935,3306,0.040291935,0.0412116679132385,0.0488841352949183,"Yes"]
["Os11g0127800","Os11g0127800","LOC_Os11g03390.1",2.8025575,3.3431277,4.178376,3.4413538,0.0026952873,380,0.002695287,0.00473697332336075,0.0284494635710526,"Yes"]
["Os03g0102700","Os03g0102700","LOC_Os03g01270.1",3.8583336,2.8036299,3.6645346,3.442166,2.6014145E-3,366,0.002601415,0.00456245325355273,0.0285089496311475,"Yes"]
["Os03g0775000","Os03g0775000","LOC_Os03g56370.1",4.3330994,2.464881,3.55582,3.4512665,0.0048932894,672,0.004893289,0.00837696335078534,0.02920681871875,"Yes"]
["Os04g0400000","Os04g0400000","LOC_Os04g32800.1",3.08431,3.0720978,4.2016916,3.4526997,0.012847002,1475,0.012847002,0.0183869359262029,0.0349351356081355,"Yes"]
["Os04g0233400","Os04g0233400","LOC_Os04g16450.1",2.863906,2.4979153,4.99911,3.4536438,0.028661825,2624,0.028661825,0.0327100473697332,0.0438119588700457,"Yes"]
["Os05g0513800","Os05g0513800","LOC_Os05g43820.1",4.33086,2.3779812,3.6623635,3.4570682,0.008200286,1044,0.008200286,0.01301421091997,0.0315051217873563,"Yes"]
["Os02g0648300","Os02g0648300","LOC_Os02g43300.1",3.0692735,3.559011,3.7533937,3.4605591,0.039310038,3245,0.039310038,0.0404512590376464,0.0485893874939907,"Yes"]
["Os12g0530100","Os12g0530100","LOC_Os12g34524.1",2.9284759,3.1056595,4.356467,3.463534,0.016570298,1788,0.016570298,0.0222887060583395,0.0371719604463087,"Yes"]
["Os11g0648100","Os11g0648100","LOC_Os11g42800.1",2.2382317,4.0537553,4.107488,3.4664917,0.0055067423,750,0.005506742,0.00934928945400149,0.029450056216,"Yes"]
["Os04g0551200","Os04g0551200","LOC_Os04g46560.1",3.400797,2.6677976,4.3312893,3.4666278,0.011471955,1363,0.011471955,0.0169907753677387,0.0337593628063096,"Yes"]
["Os01g0606400","Os01g0606400","None",4.2394404,2.2204676,3.9576526,3.47252,0.008374136,1056,0.008374136,0.0131637995512341,0.0318074427045454,"Yes"]
["Os08g0229200","Os08g0229200","None",3.8115997,2.6031265,4.0421753,3.4856339,0.0020411296,287,0.00204113,0.00357766143106457,0.0285260363414634,"Yes"]
["Os10g0533500","Os10g0533500","LOC_Os10g38940.1",3.743627,2.2987142,4.4372845,3.4932086,0.019726329,2028,0.019726329,0.02528047868362,0.0390149435991124,"Yes"]
["Os02g0815300","Os02g0815300","LOC_Os02g57020.1",3.5553427,2.8832445,4.044345,3.4943106,0.016719887,1802,0.016719887,0.0224632261281475,0.0372161302758046,"Yes"]
["Os03g0859900","Os03g0859900","LOC_Os03g64230.1",3.6182318,2.5795507,4.3045893,3.5007906,0.002336857,324,0.002336857,4.03889304412864E-3,0.0289294241574074,"Yes"]
["Os01g0897300","Os01g0897300","LOC_Os01g67190.1",3.0238352,2.7465267,4.7358737,3.5020783,0.032140933,2864,0.032140933,0.0357018199950137,0.0450130175499301,"Yes"]
["Os03g0637800","Os03g0637800","LOC_Os03g43670.1",2.3883648,3.5949478,4.531393,3.504902,0.02213672,2212,0.02213672,0.0275741710296684,0.040140318227848,"Yes"]
["Os01g0118300","Os01g0118300","LOC_Os01g02890.1",3.2617702,3.1656508,4.0881176,3.5051796,0.005766654,772,0.005766654,0.00962353527798554,0.0299612036191709,"Yes"]
["Os02g0113200","Os02g0113200","LOC_Os02g02230.1",3.3336115,3.1032937,4.0967813,3.5112286,0.0032519693,453,3.251969E-3,0.0056469708302169,0.0287939241920529,"Yes"]
["Os04g0121100","Os04g0121100","LOC_Os04g03050.1",2.8428435,3.3237348,4.3755174,3.5140316,0.002560039,358,0.002560039,0.00446272749937671,0.0286824481256983,"Yes"]
["Os01g0588000","Os01g0588000","LOC_Os01g40550.1",3.1196966,3.3816166,4.053037,3.5181167,0.022748845,2259,0.022748845,0.0281600598354525,0.0403920395285524,"Yes"]
["Os02g0735800","Os02g0735800","LOC_Os02g50280.1",2.3808823,3.1120553,5.0644145,3.5191174,0.0115362555,1369,0.011536256,0.0170655696833707,0.0337997975281227,"Yes"]
["Os05g0589500","Os05g0589500","None",3.503347,2.6679716,4.414734,3.528684,0.0051184213,700,0.005118421,0.00872600349040139,0.02932855233,"Yes"]
["Os02g0814400","Os02g0814400","LOC_Os02g56940.1",3.77104,2.8300552,3.9881,3.5297318,0.0036966007,513,0.003696601,0.00639491398653702,0.0289026639590643,"Yes"]
["GT_Os_A_Specific_0040766","Os09g0482780","LOC_Os09g30486.1",1.7099638,4.724072,4.17696,3.5369987,0.026000004,2467,0.026000004,0.0307529294440289,0.0422724021256586,"Yes"]
["Os01g0600900","Os01g0600900","LOC_Os01g41710.1",3.207775,2.9240375,4.4830627,3.538292,0.010296506,1253,0.010296506,0.0156195462478185,0.0329603236759776,"Yes"]
["Os03g0135100","Os03g0135100","LOC_Os03g04240.1",1.6886497,3.2109232,5.750858,3.5501435,0.04136359,3353,0.04136359,0.0417975567190226,0.0494808707098121,"Yes"]
["Os01g0205300","Os01g0205300","LOC_Os01g10810.1",4.006749,2.377809,4.2675977,3.5507185,0.0073466985,950,0.007346699,0.0118424333084018,0.0310185365147368,"Yes"]
["Os08g0371200","Os08g0371200","LOC_Os08g28350.1",4.1308203,2.940751,3.5819368,3.5511694,1.538134E-3,220,1.538134E-3,0.00274245823984043,0.0280429794272727,"Yes"]
["Os04g0639300","Os04g0639300","LOC_Os04g54640.1",3.136664,3.0829191,4.4505935,3.5567255,0.0104194,1268,0.0104194,0.0158065320368985,0.0329591588328075,"Yes"]
["Os12g0550800","Os12g0550800","LOC_Os12g36430.1",5.184402,1.9419522,3.5454137,3.557256,0.023976311,2348,0.023976311,0.0292695088506606,0.0409578293956558,"Yes"]
["GT_Os_A_Specific_0007489","Os03g0279950","LOC_Os03g17174.1",3.3934135,2.867999,4.416945,3.5594528,0.016661994,1798,0.016661994,0.0224133632510595,0.037169776381535,"Yes"]
["Os03g0637900","Os03g0637900","LOC_Os03g43684.1",2.7416,4.236427,3.7004428,3.55949,0.0116345715,1383,0.011634572,0.0172400897531787,0.0337427825683297,"Yes"]
["Os01g0951100","Os01g0951100","LOC_Os01g72230.1",2.6597705,3.6010175,4.4501853,3.5703247,0.0062036803,818,0.00620368,0.0101969583644976,0.0304192670904645,"Yes"]
["Os11g0683500","Os11g0683500","LOC_Os11g45710.1",3.4252,3.7624931,3.5255485,3.5710804,0.0027852147,396,0.002785215,0.00493642483171279,0.0282108519318181,"Yes"]
["Os03g0701500","Os03g0701500","LOC_Os03g49480.1",2.5919247,2.7583299,5.365652,3.5719688,0.027560031,2565,0.027560031,0.0319745699326851,0.043096797014035,"Yes"]
["Os12g0510900","Os12g0510900","LOC_Os12g32620.1",4.04883,2.8184829,3.8522506,3.5731878,0.0105810715,1288,0.010581072,0.0160558464223385,0.032950838347826,"Yes"]
["Os08g0270500","Os08g0270500","LOC_Os08g16914.1",3.5544376,3.4986525,3.6760187,3.5763695,0.0391321,3232,0.0391321,0.0402892046871104,0.0485640015779703,"Yes"]
["Os09g0510500","Os09g0510500","LOC_Os09g33580.1",2.7635732,3.9322534,4.071517,3.5891144,0.0073772795,957,0.00737728,0.0119296933433059,0.030919822445141,"Yes"]
["Os08g0160700","Os08g0160700","None",2.952794,3.647081,4.1686788,3.5895178,0.023752136,2324,0.023752136,0.0289703315881326,0.0409938973734939,"Yes"]
["GT_Os_A_Specific_0143285","Os01g0919900","LOC_Os01g69080.1",3.7542596,3.2658544,3.7815785,3.6005642,0.0003860758,122,0.000852649,0.00152081775118424,0.0280325831065573,"Yes"]
["Os02g0203000","Os02g0203000","LOC_Os02g10860.1",3.230227,2.970694,4.602141,3.6010208,0.009175591,1149,0.009175591,0.0143231114435302,0.0320307184516971,"Yes"]
["Os09g0415400","Os09g0415400","None",3.8246274,2.934617,4.045237,3.6014938,1.0328547E-3,150,0.001032855,1.86985789080029E-3,0.0276185427,"Yes"]
["Os11g0543500","Os11g0543500","LOC_Os11g34110.1",4.0847316,2.6222882,4.0988007,3.6019402,0.021905957,2199,0.021905957,0.0274121166791323,0.0399567046507503,"Yes"]
["GT_Os_A_Specific_0000387","Os02g0652600","LOC_Os02g43600.1",3.8443847,2.5849566,4.391887,3.607076,0.0044097984,1247,0.010231921,0.0155447519321864,0.032911174924619,"Yes"]
["Os08g0471800","Os08g0471800","LOC_Os08g36760.1",1.9625998,2.9349804,5.937203,3.6115944,0.036406085,3085,0.036406085,0.0384567439541261,0.0473338109999999,"Yes"]
["Os10g0554800","Os10g0554800","LOC_Os10g40614.1",1.694632,3.9004679,5.239792,3.6116307,0.031990808,2849,0.031990808,0.0355148342059336,0.0450386559803439,"Yes"]
["Os07g0572400","Os07g0572400","LOC_Os07g38470.1",2.8654828,2.781651,5.1901426,3.6124256,0.011942308,1403,0.011942308,0.0174894041386187,0.0341415519515324,"Yes"]
["Os08g0276100","Os08g0276100","LOC_Os08g17390.1",4.2053375,2.7275105,3.911254,3.6147006,0.006738615,879,0.006738615,0.0109573672400897,0.0307492431911262,"Yes"]
["Os04g0404900","Os04g0404900","LOC_Os04g33200.1",4.0242906,3.0917697,3.7362628,3.6174412,0.00026456526,40,0.000264565,0.000498628770880079,0.026529255375,"Yes"]
["Os04g0630100","Os04g0630100","LOC_Os04g53780.1",2.2604332,4.768241,3.8480916,3.6255887,0.02055043,2103,0.02055043,0.0262154076290201,0.0391953279743224,"Yes"]
["Os09g0511900","Os09g0511900","LOC_Os09g33710.1",2.8546143,2.8875856,5.1443777,3.6288593,0.008645997,1091,0.008645997,0.0136000997257541,0.0317865205930339,"Yes"]
["Os03g0205700","Os03g0205700","LOC_Os03g10800.1",2.2591515,4.101032,4.5300326,3.6300719,0.007165825,930,0.007165825,0.0115931189229618,0.0309055097580645,"Yes"]
["GT_Os_A_Specific_0413573","Os12g0541500","LOC_Os12g35630.1",3.9730148,2.385689,4.5339084,3.6308708,0.023154113,1771,0.016374903,0.0220767888307155,0.0370862427628458,"Yes"]
["Os09g0103300","Os09g0103300","None",2.3761315,3.4300933,5.091819,3.6326811,0.009571282,1191,0.009571282,0.0148466716529543,0.0322337633098236,"Yes"]
["Os05g0134400","Os05g0134400","LOC_Os05g04380.1",2.7075577,3.438694,4.776332,3.6408613,0.0043494124,598,0.004349412,0.00745450012465719,0.0291730627625418,"Yes"]
["Os05g0568800","Os05g0568800","LOC_Os05g49370.1",3.0194483,3.1787214,4.733263,3.643811,0.0026290356,371,2.629036E-3,0.00462478184991274,0.0284233514716981,"Yes"]
["Os06g0336200","Os06g0336200","LOC_Os06g22960.1",2.7345142,4.24448,4.0443,3.6744316,0.00850081,1075,0.00850081,0.0134006482174021,0.0317179059627906,"Yes"]
["Os11g0302800","Os11g0302800","LOC_Os11g19730.1",4.06721,1.6912351,5.295338,3.6845944,0.022720322,2257,0.022720322,0.0281351283969085,0.0403771429073992,"Yes"]
["GT_Os_A_Specific_0012743","Os06g0340301","None",4.1895595,2.6506152,4.221253,3.6871426,0.0037170486,516,3.717049E-3,6.43231114435303E-3,0.02889357275,"Yes"]
["Os11g0265800","Os11g0265800","LOC_Os11g16450.1",3.6770172,2.7424712,4.6963058,3.7052648,0.027455082,2555,0.027455082,0.0318499127399651,0.043100717769863,"Yes"]
["Os02g0768400","Os02g0768400","LOC_Os02g52934.1",3.4869442,3.2828536,4.3844314,3.7180765,1.0135849E-3,147,1.013585E-3,1.83246073298429E-3,0.0276563907142857,"Yes"]
["Os04g0566300","Os04g0566300","LOC_Os04g47840.1",3.2042785,2.6187792,5.331714,3.7182572,0.011268567,1349,0.011268567,0.0168162552979306,0.0335049831260192,"Yes"]
["Os05g0426800","Os05g0426800","LOC_Os05g35230.1",2.888001,3.276104,5.0046945,3.722933,0.015352249,1686,0.015352249,0.0210172026925953,0.036523055005338,"Yes"]
["GT_Os_A_Specific_0022296","Os06g0664200","LOC_Os06g45370.1",4.0806985,2.6667733,4.43483,3.7274342,0.0038192729,1632,0.014579927,0.0203440538519072,0.0358333867628676,"Yes"]
["Os01g0839200","Os01g0839200","LOC_Os01g62200.1",3.134225,3.1481009,4.9127693,3.7316983,0.004753525,651,0.004753525,8.11518324607329E-3,0.0292878475806451,"Yes"]
["Os06g0699500","Os06g0699500","LOC_Os06g48600.1",3.2467966,2.8768415,5.090804,3.7381475,6.7366366E-3,878,0.006736637,0.0109449015208177,0.0307752289373576,"Yes"]
["Os06g0725200","Os06g0725200","LOC_Os06g50950.1",3.8093672,3.0442028,4.3801765,3.7445822,0.010243724,1250,0.010243724,0.0155821490900024,0.0328700615711999,"Yes"]
["Os06g0328800","Os06g0328800","LOC_Os06g22330.1",2.8024325,3.7118597,4.7287216,3.7476711,0.028787445,2634,0.028787445,0.0328347045624532,0.0438369179555808,"Yes"]
["Os01g0323300","Os01g0323300","LOC_Os01g21990.1",3.545692,3.021614,4.6770887,3.7481315,0.035967086,3066,0.035967086,0.0382198952879581,0.0470528316849315,"Yes"]
["GT_Os_A_Specific_0071309","Os08g0382400","LOC_Os08g29370.1",4.0321927,3.1167564,4.0970426,3.748664,0.0046827933,839,0.006458461,0.0104587384692096,0.0308759083087008,"Yes"]
["Os02g0280700","Os02g0280700","LOC_Os02g17940.1",3.634769,3.3859138,4.2478275,3.7561703,0.0006488652,98,0.000648865,0.00122164048865619,0.0265571175,"Yes"]
["Os09g0361500","Os09g0361500","LOC_Os09g19734.1",3.583015,2.9605842,4.7252793,3.756293,0.011998318,1409,0.011998318,0.0175641984542508,0.0341556092959545,"Yes"]
["Os10g0544200","Os10g0544200","LOC_Os10g39750.1",3.694438,4.1774764,3.4515562,3.7744904,0.03699152,3129,0.03699152,0.0390052356020942,0.0474186598657718,"Yes"]
["Os03g0412300","Os03g0412300","LOC_Os03g29920.1",2.0844727,4.159038,5.084702,3.7760708,0.019530984,2011,0.019530984,0.025068561455996,0.0389551351685728,"Yes"]
["Os01g0672100","Os01g0672100","LOC_Os01g48130.1",2.8371425,3.8159046,4.682025,3.7783573,0.002253341,316,0.002253341,3.93916728995263E-3,0.0286017428829113,"Yes"]
["Os04g0453300","Os04g0453300","LOC_Os04g38010.1",3.0724263,4.1236444,4.140748,3.7789395,0.0012115985,185,0.001211599,0.00230615806532036,0.0262687761567567,"Yes"]
["Os01g0110800","Os01g0110800","LOC_Os01g02060.1",4.22305,3.984305,3.1535077,3.7869542,0.0006926394,103,0.000692639,0.0012839690850162,0.0269725730970873,"Yes"]
["GT_Os_A_Specific_0177896","Os03g0246500","LOC_Os03g14250.1",3.2729592,3.491407,4.6014237,3.7885964,0.006828572,911,0.006957532,0.0113562702567938,0.0306329976421514,"Yes"]
["Os02g0574600","Os02g0574600","LOC_Os02g36500.1",3.7984018,3.1873622,4.384012,3.7899253,0.0013270568,197,1.327057E-3,2.45574669658439E-3,0.0270194194263959,"Yes"]
["Os07g0618400","Os07g0618400","LOC_Os07g42626.1",3.4113684,4.113469,3.8459525,3.7902634,9.085657e-05,17,9.08566E-5,0.000211917227624033,0.0214368130941176,"Yes"]
["Os01g0805300","Os01g0805300","LOC_Os01g59090.1",4.650105,2.7135835,4.008142,3.79061,0.0051551037,702,0.005155104,0.0087509349289454,0.0294545899487179,"Yes"]
["GT_Os_A_Specific_0019913","Os03g0831700","LOC_Os03g61620.1",3.1495852,3.261187,4.9703884,3.7937202,0.0030629812,940,0.007259217,0.0117177761156818,0.0309752333904255,"Yes"]
["GT_Os_A_Specific_0139622","Os02g0593500","LOC_Os02g38020.1",5.5222335,2.5342531,3.338314,3.7982666,0.037647307,2008,0.019489743,0.02503116429818,0.0389309557634462,"Yes"]
["Os05g0401100","Os05g0401100","LOC_Os05g33280.1",4.15426,3.167152,4.0792966,3.8002365,3.1737478E-3,441,0.003173748,0.00549738219895288,0.0288659937142857,"Yes"]
["Os02g0675700","Os02g0675700","LOC_Os02g45310.1",3.945418,2.0213056,5.439268,3.8019972,0.019960927,2052,0.019960927,0.025579655946148,0.0390171921038011,"Yes"]
["Os01g0664200","Os01g0664200","LOC_Os01g47470.1",3.709529,2.9073496,4.802373,3.8064172,0.007441452,960,0.007441452,0.0119670905011219,0.0310913166374999,"Yes"]
["Os03g0123500","Os03g0123500","LOC_Os03g03164.1",3.3809533,2.992549,5.062279,3.811927,0.038331132,3189,0.038331132,0.0397531787584143,0.0482114049708372,"Yes"]
["Os05g0227600","Os05g0227600","LOC_Os05g13940.1",3.8807278,3.6717663,3.8990345,3.817176,8.149428e-05,15,8.14943e-05,0.000186985789080029,0.0217915758199999,"Yes"]
["Os07g0189700","Os07g0189700","LOC_Os07g09140.1",3.660861,2.674652,5.1195574,3.8183568,0.0065335804,852,0.00653358,0.0106207928197456,0.0307584382394366,"Yes"]
["Os03g0250200","Os03g0250200","LOC_Os03g14610.1",3.1431217,3.4396043,4.873962,3.818896,0.0048217108,663,0.004821711,0.00826477187733732,0.0291702606651583,"Yes"]
["Os08g0321000","Os08g0321000","LOC_Os08g23180.1",2.8942819,3.3933654,5.1832194,3.8236225,0.02988676,2709,0.02988676,0.0337696335078534,0.0442509392248062,"Yes"]
["Os07g0656600","Os07g0656600","LOC_Os07g46320.1",4.3646455,2.3769321,4.7655993,3.8357258,0.0064821867,845,0.006482187,0.0105335327848416,0.0307692923751479,"Yes"]
["Os07g0598000","Os07g0598000","LOC_Os07g40690.1",3.8641481,2.921197,4.7642117,3.8498523,0.0048052636,661,0.004805264,0.00823984043879331,0.0291587199757942,"Yes"]
["GT_Os_A_Specific_0018872","Os09g0427125","LOC_Os09g25860.1",5.2583427,1.9971204,4.3048034,3.8534222,0.01622657,1759,0.01622657,0.0219272001994515,0.0370010075440591,"Yes"]
["Os03g0731100","Os03g0731100","LOC_Os03g52130.1",4.3991284,3.085177,4.076447,3.8535843,0.0019093809,269,0.001909381,0.00335327848416853,0.0284703613048327,"Yes"]
["Os01g0649900","Os01g0649900","LOC_Os01g46120.1",2.6122952,4.415506,4.5333405,3.853714,0.041402537,3354,0.041402537,0.0418100224382946,0.0495126940688729,"Yes"]
["Os10g0504600","Os10g0504600","LOC_Os10g36060.1",3.3989916,3.3177252,4.857711,3.8581426,0.034431167,2985,0.034431167,0.0372101720269259,0.0462657992753768,"Yes"]
["Os11g0179000","Os11g0179000","LOC_Os11g07680.1",3.4105163,3.1000018,5.0675225,3.859347,0.0039588646,552,0.003958865,0.0068810770381451,0.0287663179619565,"Yes"]
["Os08g0352400","Os08g0352400","None",3.4483576,3.647273,4.4919243,3.8625183,0.003203116,445,0.003203116,0.00554724507604088,0.0288712320808988,"Yes"]
["Os06g0350200","Os06g0350200","None",3.5004277,3.5196471,4.586846,3.8689735,0.0073699267,956,0.007369927,0.0119172276240339,0.0309213150596234,"Yes"]
["Os02g0243300","Os02g0243300","LOC_Os02g14680.1",2.433145,4.2876725,4.906921,3.875913,0.012938367,1485,0.012938367,0.0185115931189229,0.0349466599575757,"Yes"]
["Os10g0390600","Os10g0390600","LOC_Os10g25140.1",3.6920805,2.7002025,5.249601,3.8806279,0.016694427,1801,0.016694427,0.0224507604088755,0.0371800925580233,"Yes"]
["GT_Os_A_Specific_0372500","Os07g0673550","LOC_Os07g47640.1",4.2751174,3.1497006,4.2182546,3.8810241,0.0035619913,497,3.561991E-3,0.00619546247818499,0.0287467724366197,"Yes"]
["Os01g0511600","Os01g0511600","LOC_Os01g32830.1",4.643629,2.73709,4.2678547,3.882858,0.0038350555,529,0.003835056,0.00659436549488905,0.0290782790472589,"Yes"]
["Os12g0283300","Os12g0283300","LOC_Os12g18550.1",4.1372523,2.8372235,4.67544,3.8833053,5.436036E-3,740,5.436036E-3,0.00922463226128147,0.0294647843189189,"Yes"]
["Os12g0186500","Os11g0115400","LOC_Os11g02389.1",2.3561335,3.9624066,5.334803,3.8844478,0.0100662,1237,0.0100662,0.0154200947394664,0.032639877283751,"Yes"]
["Os10g0358600","Os10g0358600","LOC_Os10g21460.1",3.8161879,3.9378815,3.9055262,3.8865318,0.008878514,1122,0.008878514,0.0139865370231862,0.0317395005828877,"Yes"]
["GT_Os_A_Specific_0046533","Os02g0197600","LOC_Os02g10390.1",4.170808,3.4282112,4.0713425,3.8901205,0.015136072,2734,0.030359536,0.0340812764896534,0.0445399044974396,"Yes"]
["Os09g0450300","Os09g0450300","LOC_Os09g27700.1",3.3604908,3.9544125,4.366267,3.8937235,0.006340385,828,0.006340385,0.0103216155572176,0.0307141113949275,"Yes"]
["Os11g0242800","Os11g0242800","LOC_Os11g13890.1",4.4666157,3.2298222,3.9883347,3.8949242,0.009299166,1165,0.009299166,0.0145225629518823,0.0320162702369098,"Yes"]
["osa-miR159d","osa-miR159d","No hit",4.7172956,1.9870028,4.9881744,3.8974907,0.016757512,1805,0.016757512,0.0225006232859636,0.0372378840066481,"Yes"]
["Os02g0236800","Os02g0236800","LOC_Os02g14170.1",2.6530647,3.3109891,5.737488,3.900514,0.024917526,2398,0.024917526,0.0298927948142607,0.0416781471167639,"Yes"]
["Os05g0375600","Os05g0375600","LOC_Os05g31160.1",4.6690407,2.5173945,4.515171,3.9005356,0.0052304394,711,0.005230439,0.00886312640239341,0.0295067381561181,"Yes"]
["Os07g0670300","Os07g0670300","LOC_Os07g47400.1",3.5592222,3.2699833,4.884235,3.90448,2.4327678E-3,335,0.002432768,4.17601595612066E-3,0.0291278580537313,"Yes"]
["Os11g0490600","Os11g0490600","LOC_Os11g29840.1",3.3761563,3.3593569,4.9779587,3.9044907,0.006488389,849,0.006488389,0.0105833956619296,0.030653625770318,"Yes"]
["Os06g0604200","Os06g0604200","LOC_Os06g40170.1",4.525622,2.5368028,4.653258,3.9052277,0.019821368,2042,0.019821368,0.025454998753428,0.0389341366542605,"Yes"]
["Os05g0562800","Os05g0562800","LOC_Os05g48840.1",3.795518,3.83527,4.0902085,3.9069989,1.4028584e-05,7,1.40286E-5,8.72600349040139e-05,0.0080383878,"Yes"]
["Os07g0577600","Os07g0577600","LOC_Os07g38960.1",3.960925,3.3817415,4.3961744,3.912947,0.033173315,2916,0.033173315,0.0363500373971578,0.0456303725874485,"Yes"]
["Os06g0109200","Os06g0109200","LOC_Os06g01966.1",4.3974595,3.10963,4.2491736,3.9187546,2.573821E-3,362,2.573821E-3,4.51259037646472E-3,0.0285182210801104,"Yes"]
["Os01g0799500","Os01g0799500","LOC_Os01g58550.1",4.523693,3.3463602,3.8913593,3.920471,0.005498561,747,0.005498561,0.00931189229618549,0.0295244018353413,"Yes"]
["Os01g0514600","Os01g0514600","LOC_Os01g33080.1",3.252459,4.182854,4.354984,3.9300988,0.0036357017,504,0.003635702,0.006282722513089,0.0289341284166666,"Yes"]
["Os10g0196000","Os10g0196000","LOC_Os10g12050.1",4.015004,3.0480094,4.7410583,3.9346905,0.004092672,562,0.004092672,7.00573423086512E-3,0.0292094437580071,"Yes"]
["Os11g0703600","Os11g0703600","LOC_Os11g47730.1",2.6994572,4.3159876,4.800961,3.938802,0.03893739,3226,0.03893739,0.0402144103714784,0.048412235365778,"Yes"]
["Os08g0509400","Os08g0509400","LOC_Os08g39870.1",2.967986,4.0216694,4.8372593,3.9423048,0.041715063,3372,0.041715063,0.0420344053851907,0.0496201416645907,"Yes"]
["Os09g0439500","Os09g0439500","LOC_Os09g26810.1",4.3096247,2.821828,4.6959715,3.9424746,0.0057935957,780,0.005793596,0.00972326103216155,0.029792453276923,"Yes"]
["Os05g0178300","Os05g0178300","LOC_Os05g08554.1",2.7837934,4.0472317,5.0088243,3.9466164,0.010220188,1244,0.010220188,0.0155073547743704,0.0329527122733118,"Yes"]
["Os10g0150800","Os10g0150800","LOC_Os10g06000.1",2.9162426,2.660173,6.263607,3.9466743,0.025606828,2439,0.025606828,0.0304038893044128,0.0421111058253382,"Yes"]
["Os05g0353500","Os05g0353500","LOC_Os05g28520.1",3.7187667,3.2178543,4.908821,3.9484806,0.0024593812,339,0.002459381,0.00422587883320867,0.0290990477610619,"Yes"]
["Os01g0191800","Os01g0191800","LOC_Os01g09580.1",2.7819815,4.9358835,4.1312923,3.9497192,0.027604975,2568,0.027604975,0.0320119670905011,0.0431166490362149,"Yes"]
["Os01g0716200","Os01g0716200","LOC_Os01g51840.1",3.1518288,2.7131538,5.9886394,3.9512074,0.023831315,2331,0.023831315,0.0290575916230366,0.0410070375225225,"Yes"]
["Os01g0946600","Os01g0946600","LOC_Os01g71820.1",3.6592727,3.4002323,4.7997293,3.953078,1.2588024E-3,191,0.001258802,0.00238095238095238,0.026434842,"Yes"]
["GT_Os_A_Specific_0011745","Os08g0104600","LOC_Os08g01380.1",4.620801,3.2212534,4.0257435,3.9559326,4.005326E-3,868,0.006663916,0.0108202443280977,0.0307937408709677,"Yes"]
["Os01g0191200","Os01g0191200","LOC_Os01g09540.1",2.7970986,4.302041,4.77526,3.958133,0.012651034,1453,0.012651034,0.0181126901022188,0.0349231227625602,"Yes"]
["Os10g0127900","Os10g0127900","LOC_Os10g03850.1",2.3643594,4.0582075,5.4622526,3.9616063,0.013527157,1538,0.013527157,0.019172276240339,0.0352779107457737,"Yes"]
["GT_Os_A_Specific_0055847","Os01g0329900","LOC_Os01g22640.1",2.1647944,3.902164,5.825979,3.9643126,0.018400671,2631,0.0287646,0.0327973074046372,0.0438520754846066,"Yes"]
["Os09g0471300","Os09g0471300","None",3.6376586,3.8126917,4.4436445,3.9646652,0.030562801,2748,0.030562801,0.0342557965594614,0.0446096778788209,"Yes"]
["Os01g0668100","Os01g0668100","LOC_Os01g47780.1",3.5489187,3.0606422,5.3205457,3.9767025,0.01813002,1907,0.01813002,0.0237721266517078,0.0381329366649187,"Yes"]
["Os01g0249200","Os01g0249200","LOC_Os01g14670.1",2.4427047,4.25291,5.2683926,3.9880025,0.009443476,1178,0.009443476,0.0146846173024183,0.0321543142920203,"Yes"]
["GT_Os_A_Specific_0076686","Os07g0243150","LOC_Os07g13969.1",4.605673,3.036973,4.3336706,3.9921055,3.1807118E-3,442,3.180712E-3,0.00550984791822488,0.0288638819728506,"Yes"]
["Os05g0496100","Os05g0496100","LOC_Os05g41630.1",5.3848443,2.603282,4.006312,3.998146,0.0073662763,954,0.007366276,0.0118922961854899,0.0309707893459119,"Yes"]
["Os05g0496100","Os02g0556700","LOC_Os02g35080.1",5.3848443,2.603282,4.006312,3.998146,0.0073662763,2826,0.03166993,0.0352281226626776,0.0449497838747346,"Yes"]
["Os02g0702600","Os02g0702600","LOC_Os02g47420.1",4.090349,3.8732238,4.0398736,4.0011487,8.924553E-3,1126,8.924553E-3,0.0140363999002742,0.0317907478534635,"Yes"]
["Os01g0829600","Os01g0829600","LOC_Os01g61370.1",2.214448,4.4370337,5.384179,4.011887,0.016289113,1766,0.016289113,0.0220144602343555,0.0369963942485843,"Yes"]
["Os01g0322700","Os01g0322700","None",2.646412,3.988904,5.407627,4.014314,0.024355706,2368,0.024355706,0.0295188232361007,0.0412545341072635,"Yes"]
["Os03g0787400","Os03g0787400","None",2.5055752,3.7805824,5.7568665,4.0143414,0.012825277,1474,0.012825277,0.0183744702069309,0.0348997191635006,"Yes"]
["Os07g0191500","Os07g0191500","LOC_Os07g09370.1",4.122187,3.1785798,4.745603,4.0154567,0.0203613,2091,0.0203613,0.0260658189977561,0.0390574721664275,"Yes"]
["Os05g0563600","Os05g0563600","LOC_Os05g48900.1",3.4008393,4.0800443,4.5657697,4.015551,0.028475463,2611,0.028475463,0.0325479930191972,0.0437438077721179,"Yes"]
["Os06g0264800","Os06g0264800","LOC_Os06g15400.1",4.3599625,3.230505,4.4585266,4.016331,0.0033921038,476,3.392104E-3,0.00593368237347295,0.0285834645882352,"Yes"]
["Os06g0610800","Os06g0610800","LOC_Os06g40818.1",3.0541186,3.765307,5.2504525,4.0232925,0.01591965,1732,0.01591965,0.0215906257791074,0.0368670416570438,"Yes"]
["Os07g0214900","Os07g0214900","LOC_Os07g11440.1",2.9698396,4.3172297,4.788091,4.0250535,0.031198857,2797,0.031198857,0.0348666168037895,0.0447402986868072,"Yes"]
["Os02g0744900","Os02g0744900","LOC_Os02g51080.1",4.661188,3.1678762,4.247592,4.0255523,0.004402519,608,0.004402519,7.57915731737721E-3,0.0290435916266447,"Yes"]
["GT_Os_A_Specific_0037656","Os03g0635000","LOC_Os03g43470.1",3.4731555,3.68611,4.9234705,4.027579,0.0033548295,467,0.00335483,0.00582149090002493,0.0288141822912205,"Yes"]
["Os12g0291100","Os12g0291100","LOC_Os12g19381.1",4.7125854,3.5140944,3.898468,4.041716,0.00069985667,105,0.000699857,1.3089005235602E-3,0.0267345374,"Yes"]
["Os09g0264400","Os09g0264400","LOC_Os09g08990.1",3.2606716,3.666615,5.2053995,4.044229,0.034214806,2976,0.034214806,0.0370979805534779,0.0461141084899193,"Yes"]
["Os03g0582900","Os03g0582900","None",4.6008162,3.0570006,4.476864,4.0448937,0.006601933,864,0.006601933,0.0107703814510097,0.0306485570173611,"Yes"]
["Os03g0137600","Os03g0137600","LOC_Os03g04470.1",3.6515827,3.3232088,5.1738844,4.0495586,0.002317479,322,0.002317479,0.00401396160558464,0.0288677275434782,"Yes"]
["Os02g0247100","Os02g0247100","LOC_Os02g14910.1",4.8067207,2.1552696,5.196393,4.0527945,0.014914803,1657,0.014914803,0.0206556968337073,0.0361033644133977,"Yes"]
["Os11g0439600","Os11g0439600","LOC_Os11g25260.1",3.5659018,3.5498738,5.059945,4.0585732,0.0071478086,926,0.007147809,0.0115432560458738,0.0309609739730021,"Yes"]
["GT_Os_A_Specific_0043033","Os06g0483200","LOC_Os06g28820.1",2.5872154,4.22895,5.3805556,4.0655737,0.007959695,2414,0.025187334,0.0300922463226128,0.0418502057473073,"Yes"]
["Os02g0653000","Os02g0653000","None",4.04641,2.8097267,5.3474517,4.067863,0.029177248,2654,0.029177248,0.0330840189478933,0.0440956826405425,"Yes"]
["Os01g0239200","Os01g0239200","LOC_Os01g13770.1",3.8213592,3.6329865,4.7749715,4.076439,0.0030653314,423,0.003065331,0.00527299925205684,0.0290662946595744,"Yes"]
["Os03g0567100","Os03g0567100","LOC_Os03g36960.1",4.187552,2.7321296,5.3103504,4.0766773,0.00835078,1054,0.00835078,0.0131388681126901,0.0317789170588235,"Yes"]
["Os07g0413800","Os07g0413800","LOC_Os07g23120.1",2.694501,4.9545164,4.595154,4.0813904,0.0084799,1071,0.0084799,0.0133507853403141,0.0317580568627451,"Yes"]
["Os06g0478600","Os06g0478600","LOC_Os06g28480.1",4.2078524,2.2641935,5.8002825,4.090776,0.015781796,1723,0.015781796,0.0214784343056594,0.0367387021218804,"Yes"]
["Os04g0496300","Os04g0496300","LOC_Os04g41900.1",2.693812,4.8636975,4.720214,4.0925746,0.009819252,1214,0.009819252,0.0151333831962104,0.032442355660626,"Yes"]
["Os05g0496200","Os05g0496200","LOC_Os05g41640.1",4.6787996,3.3300104,4.289151,4.0993204,0.004775792,654,0.004775792,8.1525804038893E-3,0.0292900637798165,"Yes"]
["Os03g0595300","Os03g0595300","LOC_Os03g39830.1",4.093555,3.8715262,4.361116,4.108732,0.00044082355,73,0.000440824,0.000909997506856145,0.0242211652602739,"Yes"]
["Os05g0119700","Os05g0119700","LOC_Os05g02820.1",3.5221448,3.8629394,4.9448905,4.1099916,0.010852148,1314,0.010852148,0.0163799551234106,0.033126305652968,"Yes"]
["Os05g0507000","Os05g0507000","LOC_Os05g43140.1",2.9179604,4.8257575,4.616559,4.1200924,0.002432316,334,0.002432316,0.00416355023684866,0.0292096391497005,"Yes"]
["Os06g0473000","Os06g0473000","LOC_Os06g27860.1",4.221265,2.9171824,5.2286105,4.1223526,0.005777353,774,0.005777353,0.00964846671652954,0.0299392285310077,"Yes"]
["Os03g0162900","Os03g0162900","LOC_Os03g06710.1",3.889462,3.7318587,4.7700396,4.1304536,0.00022411977,35,0.00022412,4.36300174520069E-4,0.025684152,"Yes"]
["GT_Os_A_Specific_0024966","Os09g0530000","LOC_Os09g36040.1",4.3846703,3.2810197,4.739463,4.1350513,2.6554903E-3,833,0.006413568,0.0103839441535776,0.0308821383529411,"Yes"]
["Os07g0685500","Os07g0685500","LOC_Os07g48610.1",4.320106,3.1107416,4.976987,4.135945,0.01069997,1296,0.01069997,0.0161555721765145,0.033115416412037,"Yes"]
["Os11g0708100","Os11g0708100","LOC_Os11g48060.1",3.4389067,4.2773995,4.692565,4.13629,0.00043536254,71,0.000435363,0.000885066068312141,0.0245949435633802,"Yes"]
["Os03g0333400","Os03g0333400","LOC_Os03g21560.1",5.053234,3.1388664,4.2317095,4.14127,0.008914578,1125,0.008914578,0.0140239341810022,0.0317834420959999,"Yes"]
["Os09g0491100","Os09g0491100","LOC_Os09g31430.1",3.8962102,4.536384,3.9979386,4.143511,0.0021049846,296,0.002104985,0.00368985290451259,0.0285239690371621,"Yes"]
["Os04g0672300","Os04g0672300","LOC_Os04g57650.1",4.025488,4.4986825,3.9089212,4.144364,0.032042056,2853,0.032042056,0.0355646970830216,0.045047559276551,"Yes"]
["Os01g0293900","Os07g0156200","LOC_Os07g06175.1",2.5534673,5.2700953,4.637275,4.1536126,0.0077991458,999,0.007799146,0.0124532535527299,0.0313136882942942,"Yes"]
["Os01g0293900","Os01g0293900","LOC_Os01g18930.1",2.5534673,5.2700953,4.637275,4.1536126,0.0077991458,1000,0.007799146,0.0124657192720019,0.031282374606,"Yes"]
["Os12g0186600","Os12g0186600","LOC_Os12g08564.1",1.8959122,4.3485045,6.2217474,4.155388,0.040833324,3330,0.040833324,0.0415108451757666,0.0491839226918918,"Yes"]
["Os07g0586200","Os07g0586200","LOC_Os07g39750.1",4.416905,3.3971663,4.6559176,4.156663,0.000878362,125,0.000878362,0.00155821490900024,0.028184879856,"Yes"]
["Os09g0555100","Os09g0555100","LOC_Os09g38210.1",2.8476996,4.1575303,5.532273,4.1791673,0.020172758,2069,0.020172758,0.0257915731737721,0.0391072655089415,"Yes"]
["Os09g0555100","Os09g0555150","LOC_Os09g38239.1",2.8476996,4.1575303,5.532273,4.1791673,0.020172758,2070,0.020172758,0.0258040388930441,0.0390883731101449,"Yes"]
["Os01g0111100","Os01g0111100","LOC_Os01g02080.1",4.034289,3.7584252,4.748054,4.180256,3.1122488E-3,433,0.003112249,0.00539765644477686,0.0288296321916859,"Yes"]
["Os04g0574200","Os04g0574200","LOC_Os04g48490.1",3.1397243,5.3191767,4.204899,4.2212663,0.02485033,2393,0.02485033,0.0298304662179007,0.0416526007647304,"Yes"]
["Os03g0736500","Os03g0736500","LOC_Os03g52650.1",3.0568976,4.946642,4.6675076,4.2236824,0.0028878124,403,2.887812E-3,0.0050236848666168,0.0287419700545905,"Yes"]
["Os05g0555100","Os05g0555100","LOC_Os05g48150.1",4.198568,4.0219126,4.48021,4.233563,0.005420595,736,0.005420595,0.00917476938419346,0.0295407697622282,"Yes"]
["Os02g0258200","Os02g0258200","LOC_Os02g15810.1",3.0861483,4.691873,4.95282,4.2436137,0.0053865565,729,0.005386557,0.00908750934928945,0.0296371469506172,"Yes"]
["Os06g0217700","Os06g0217700","LOC_Os06g11400.1",3.1019995,3.80724,5.8579082,4.255716,0.0069311988,907,0.006931199,0.0113064073797058,0.0306516418842337,"Yes"]
["Os10g0450000","Os10g0450000","LOC_Os10g31240.1",3.1735816,3.6994004,5.9016337,4.2582054,0.020502998,2099,0.020502998,0.0261655447519321,0.0391793830290614,"Yes"]
["Os03g0582000","Os03g0582000","LOC_Os03g38540.1",3.5487504,4.371758,4.862658,4.2610555,0.0007036521,108,0.000703652,1.34629768137621E-3,0.0261328534444444,"Yes"]
["Os04g0165900","Os04g0166000","LOC_Os04g08390.1",3.816834,3.7862453,5.211299,4.2714596,0.0117723895,1219,0.009887274,0.0151957117925704,0.032533105835931,"Yes"]
["Os04g0165900","Os04g0165900","LOC_Os04g08370.1",3.816834,3.7862453,5.211299,4.2714596,0.0117723895,1392,0.01177239,0.0173522812266267,0.0339217358405172,"Yes"]
["GT_Os_A_Specific_0427777","Os04g0659100","LOC_Os04g56400.1",4.682658,4.155129,3.9773617,4.2717166,9.57649e-05,1814,0.016841931,0.0226128147594116,0.0372397934073869,"Yes"]
["GT_Os_A_Specific_0009960","Os02g0764500","LOC_Os02g52650.1",4.8823376,3.2167993,4.71671,4.271949,0.005900843,1080,0.008527925,0.0134629768137621,0.0316717659027777,"Yes"]
["Os06g0561000","Os06g0561000","LOC_Os06g36560.1",2.951264,4.515019,5.3500333,4.2721057,0.009970762,1228,0.009970762,0.0153079032660184,0.0325673667605863,"Yes"]
["GT_Os_A_Specific_0125198","Os10g0575900","LOC_Os10g42520.1",4.8086586,2.8920984,5.1184435,4.273067,0.006757592,882,0.006757592,0.0109947643979057,0.030730954095238,"Yes"]
["Os01g0938100","Os01g0938100","LOC_Os01g71190.1",4.920087,3.3011484,4.5981674,4.273134,0.0016820941,239,0.001682094,0.00297930690600847,0.0282296193891213,"Yes"]
["Os06g0131700","Os06g0131700","LOC_Os06g04090.1",6.8508577,1.2824984,4.7065187,4.2799582,0.05177718,2030,0.019734947,0.025305410122164,0.0389935332103448,"Yes"]
["Os08g0485900","Os08g0485900","LOC_Os08g37940.1",4.42419,3.466258,4.951691,4.280713,1.3449648E-3,201,1.344965E-3,0.0025056095736724,0.0268390776865671,"Yes"]
["GT_Os_A_Specific_0046061","Os11g0457000","LOC_Os11g26920.1",4.797993,2.7696984,5.29602,4.2879043,4.9392446E-3,3265,0.03955024,0.0407005734230865,0.0485868338866768,"Yes"]
["Os08g0117000","Os08g0117000","LOC_Os08g02380.1",4.8729067,3.8819284,4.140045,4.2982936,0.023795076,2329,0.023795076,0.0290326601844926,0.0409798410631172,"Yes"]
["Os05g0267100","Os05g0267100","LOC_Os05g18294.1",4.0648646,4.0172467,4.8159294,4.299347,0.008056759,1029,0.008056759,0.01282722513089,0.0314049177346938,"Yes"]
["Os02g0687900","Os02g0687900","LOC_Os02g46260.1",4.159006,3.3871355,5.3618956,4.302679,1.9881139E-3,278,1.988114E-3,3.46546995761655E-3,0.0286846232158273,"Yes"]
["Os04g0223300","Os04g0223300","LOC_Os04g14680.1",3.7536912,3.9672942,5.191408,4.304131,0.0056056576,759,0.005605658,0.00946148092744951,0.0296235760711462,"Yes"]
["GT_Os_A_Specific_0243715","Os07g0150901","None",2.891654,5.136002,4.962834,4.3301635,0.011849961,1398,0.011849961,0.0174270755422587,0.0339987078476394,"Yes"]
["GT_Os_A_Specific_0021544","Os08g0435900","LOC_Os08g33820.1",4.9677353,3.6492825,4.3850317,4.3340163,0.016123086,2340,0.023904042,0.0291697830964846,0.0409739796846153,"Yes"]
["GT_Os_A_Specific_0265797","Os01g0953801","LOC_Os01g72450.1",4.1030245,3.6593533,5.2630534,4.34181,1.5551724E-3,222,0.001555172,0.00276738967838444,0.0280981751891891,"Yes"]
["Os05g0217800","Os05g0217800","LOC_Os05g12640.1",4.1515937,4.02651,4.847964,4.3420224,7.745639e-05,49,0.000314769,0.000610820244328097,0.025766091,"Yes"]
["Os07g0414000","Os07g0414000","LOC_Os07g23150.1",3.4375906,4.1456814,5.508053,4.363775,0.003660552,510,0.003660552,0.00635751682872101,0.0287891648470588,"Yes"]
["GT_Os_A_Specific_0033211","Os04g0422000","LOC_Os04g34460.1",4.133049,4.1813164,4.7986236,4.3709965,0.00017257771,374,2.645587E-3,0.00466217900772874,0.0283728595106951,"Yes"]
["GT_Os_A_Specific_0022174","Os01g0279100","LOC_Os01g17170.1",5.205325,3.4065676,4.5274267,4.379773,0.01427789,2089,0.020335723,0.0260408875592121,0.0390457563202489,"Yes"]
["Os03g0162200","Os03g0162200","LOC_Os03g06670.1",3.4774194,4.893832,4.775845,4.3823657,0.0101571,1242,0.0101571,0.0154824233358264,0.0328020355072463,"Yes"]
["Os01g0869800","Os01g0869800","LOC_Os01g64960.1",4.349475,3.849701,4.9512377,4.383471,0.00038757094,61,0.000387571,0.000760408875592121,0.0254843816557377,"Yes"]
["Os04g0465600","Os04g0465600","LOC_Os04g39150.1",5.962716,2.7840466,4.4177237,4.388162,0.010652883,1292,0.010652883,0.0161057092994265,0.0330717598397832,"Yes"]
["Os03g0197100","Os03g0197100","LOC_Os03g10090.1",3.6411486,4.6923304,4.831093,4.3881907,0.012247549,1429,0.012247549,0.0178135128396908,0.0343771301882435,"Yes"]
["Os08g0273300","Os07g0273700","LOC_Os07g17230.1",4.1698184,4.39159,4.6184444,4.3932843,1.1656358E-3,175,0.001165636,0.00218150087260034,0.02671637712,"Yes"]
["Os08g0130400","Os08g0130400","LOC_Os08g03630.1",4.4007287,4.0311756,4.8244624,4.418789,1.0939121E-4,18,1.09391E-4,0.000224382946896035,0.0243759611666666,"Yes"]
["Os03g0592500","Os03g0592500","LOC_Os03g39610.1",5.2349224,3.3958302,4.629755,4.4201694,0.021399725,2154,0.021399725,0.0268511593118923,0.0398487915389972,"Yes"]
["Os10g0478100","Os10g0478100","LOC_Os10g33790.1",3.1561813,4.0229053,6.0874987,4.422195,0.011947233,1404,0.011947233,0.0175018698578908,0.0341313045320512,"Yes"]
["Os07g0469100","Os07g0469100","LOC_Os07g28610.1",4.9452276,3.6415596,4.6863546,4.424381,0.0011038454,163,1.103845E-3,0.00203191224133632,0.0271627134662576,"Yes"]
["Os04g0350100","Os04g0350100","LOC_Os04g28250.1",3.5178623,5.315426,4.4660063,4.4330983,0.0033053805,464,3.305381E-3,0.00578409374220892,0.0285730241185344,"Yes"]
["Os11g0440200","Os11g0440200","LOC_Os11g25330.1",4.3353195,3.864668,5.1092253,4.436404,0.0026257657,369,0.002625766,0.00459985041136873,0.0285418629430894,"Yes"]
["Os01g0857500","Os01g0857500","LOC_Os01g63870.1",4.7259808,3.8109336,4.776242,4.437719,0.00014618455,26,0.000146185,0.000324108701072051,0.0225518475,"Yes"]
["Os07g0562700","Os07g0562700","LOC_Os07g37550.1",4.8438587,3.5534363,4.920637,4.4393106,0.006686799,870,0.006686799,0.0108451757666417,0.0308284491827586,"Yes"]
["Os05g0232200","Os05g0232200","LOC_Os05g14270.1",4.174853,3.9103508,5.2880645,4.457756,0.003902438,542,0.003902438,0.00675641984542508,0.0288794812140221,"Yes"]
["Os06g0705100","Os06g0705100","LOC_Os06g49160.1",4.825839,3.6647415,4.901161,4.463914,0.0037386417,518,0.003738642,0.00645724258289703,0.0289492144054054,"Yes"]
["Os11g0308800","Os11g0308800","LOC_Os11g20360.1",4.4768553,3.4869967,5.438329,4.467394,0.0016999751,244,0.001699975,0.00304163550236848,0.0279450808401639,"Yes"]
["Os02g0257300","Os02g0257300","LOC_Os02g15750.1",4.932852,3.4388218,5.0602894,4.477321,1.4621641E-3,212,1.462164E-3,0.00264273248566442,0.027663867,"Yes"]
["Os05g0587600","Os05g0587600","None",3.6268587,4.114112,5.7048416,4.4819374,3.3218605E-3,465,0.003321861,0.00579655946148092,0.0286537300451612,"Yes"]
["Os03g0103000","Os03g0103000","LOC_Os03g01290.1",4.2251844,4.2006636,5.0345964,4.486815,0.0067732865,885,0.006773287,0.0110321615557217,0.0306979143016949,"Yes"]
["Os10g0533100","Os10g0533100","LOC_Os10g38910.1",3.2989168,4.6035333,5.5800557,4.4941688,0.02390122,2339,0.02390122,0.0291573173772126,0.0409866581530568,"Yes"]
["GT_Os_A_Specific_0416926","Os09g0541000","LOC_Os09g36930.1",5.0001464,4.100619,4.391769,4.4975114,0.01267833,2072,0.020179782,0.0258289703315881,0.0390642401554054,"Yes"]
["Os06g0694400","Os06g0694400","LOC_Os06g47930.1",3.850305,4.854255,4.8668118,4.523791,0.002684018,378,0.002684018,0.00471204188481675,0.0284804132222222,"Yes"]
["Os03g0773700","Os03g0773700","LOC_Os03g56270.1",4.085978,4.9465914,4.548326,4.5269656,1.948712E-3,275,1.948712E-3,0.00342807279980054,0.0284228502981818,"Yes"]
["Os08g0445000","Os08g0445000","LOC_Os08g34550.1",2.973105,4.90432,5.7452683,4.540898,0.020728044,2111,0.020728044,0.0263151333831962,0.039384265506395,"Yes"]
["Os03g0749500","Os03g0749500","LOC_Os03g53860.1",3.9714837,4.748324,4.93391,4.551239,0.00017243181,29,0.000172432,0.000361505858888057,0.0238491293793103,"Yes"]
["Os07g0148800","Os07g0148800","LOC_Os07g05470.1",4.197673,4.0758877,5.3926516,4.555404,1.6743988E-3,237,1.674399E-3,0.00295437546746447,0.0283376134556962,"Yes"]
["GT_Os_A_Specific_0027303","Os05g0215033","None",4.8903675,4.0561953,4.7211995,4.555921,0.00025661348,38,0.000256613,0.000473697332336075,0.0270861774473684,"Yes"]
["Os08g0547500","Os08g0547500","LOC_Os08g43400.1",3.099484,4.5803576,6.016577,4.565473,0.008211287,1046,0.008211287,0.013039142358514,0.0314870670717017,"Yes"]
["Os02g0725000","Os02g0725000","LOC_Os02g49310.1",4.7448716,3.781231,5.178229,4.56811,0.023358328,2299,0.023358328,0.0286586886063325,0.040752611399739,"Yes"]
["Os02g0594700","Os02g0594700","LOC_Os02g38120.1",5.7990966,2.8344646,5.0858426,4.573135,0.020437935,2097,0.020437935,0.0261406133133881,0.0390923019957081,"Yes"]
["Os11g0530600","Os11g0530600","LOC_Os11g32650.1",3.438591,4.8265047,5.4700747,4.57839,0.030556496,2746,0.030556496,0.0342308651209174,0.0446329590152949,"Yes"]
["Os03g0819600","Os03g0819600","LOC_Os03g60509.1",2.6140041,4.9662285,6.178422,4.5862184,0.03272502,2893,0.03272502,0.0360633258539017,0.0453716056757691,"Yes"]
["Os08g0531000","Os08g0531000","LOC_Os08g41880.1",4.6418796,4.671396,4.478396,4.5972238,0.000509401,85,0.000509401,1.05958613812016E-3,0.0240377342470588,"Yes"]
["Os03g0304800","Os03g0304800","LOC_Os03g19220.1",4.2925944,3.8519073,5.664397,4.6029663,0.0014629809,213,0.001462981,0.00265519820493642,0.0275493746056337,"Yes"]
["Os02g0657000","Os02g0657000","LOC_Os02g43970.1",3.6563907,4.3187833,5.8650227,4.613399,0.021872617,2195,0.021872617,0.0273622538020443,0.0399685953471526,"Yes"]
["Os02g0257400","Os02g0257400","LOC_Os02g15750.1",4.894485,3.6091619,5.343679,4.6157756,1.2471322E-3,189,1.247132E-3,2.35602094240837E-3,0.0264669124444444,"Yes"]
["Os02g0739900","Os02g0739900","LOC_Os02g50640.1",4.2153654,3.8188338,5.814323,4.616174,0.0021965979,306,0.002196598,0.00381451009723261,0.0287926620196078,"Yes"]
["Os03g0131900","Os03g0131900","LOC_Os03g03990.1",4.3783903,4.0539017,5.456401,4.6295643,0.0018148228,263,0.001814823,0.00327848416853652,0.0276777758669201,"Yes"]
["Os01g0652800","Os01g0652800","LOC_Os01g46400.1",4.4258695,4.4385805,5.0665793,4.6436768,0.004505676,623,0.004505676,0.00776614310645724,0.0290084533483146,"Yes"]
["Os02g0640700","Os02g0640700","LOC_Os02g42800.1",5.918917,2.9173994,5.108008,4.648108,0.00800554,1023,0.00800554,0.012752430815258,0.0313882902639296,"Yes"]
["Os01g0914400","Os01g0914400","LOC_Os01g68598.1",4.4107018,3.6588116,5.8871875,4.6522336,2.0582443E-3,290,0.002058244,0.00361505858888057,0.028467643737931,"Yes"]
["Os02g0566000","Os02g0566000","None",4.3812256,4.365614,5.262604,4.6698146,0.0042624483,585,0.004262448,0.00729244577412116,0.0292250921846153,"Yes"]
["Os05g0516100","Os05g0516100","None",3.1090894,4.845135,6.1023407,4.6855216,0.03413558,2971,0.03413558,0.0370356519571179,0.0460847564389094,"Yes"]
["Os02g0616100","Os02g0616100","LOC_Os02g40260.1",4.0673337,3.7889032,6.215766,4.6906676,0.015507051,1700,0.015507051,0.0211917227624033,0.0365875185652941,"Yes"]
["GT_Os_A_Specific_0068659","Os07g0558400","LOC_Os07g37240.1",5.563139,3.7513428,4.7991667,4.7045493,0.011272352,1192,0.009576854,0.0148591373722263,0.0322254709681208,"Yes"]
["Os02g0614600","Os02g0614600","LOC_Os02g40100.1",3.3309264,3.4226737,7.3633,4.705633,0.024402112,2372,0.024402112,0.0295686861131887,0.0412634364384485,"Yes"]
["Os09g0250300","Os09g0250300","LOC_Os09g07630.1",5.265486,3.8496418,5.0078764,4.707668,1.6741897E-3,236,0.00167419,0.00294190974819247,0.0284541359745762,"Yes"]
["Os08g0375400","Os08g0375400","LOC_Os08g28790.1",3.6359105,5.0510125,5.438864,4.7085958,0.02769056,2575,0.02769056,0.0320992271254051,0.0431327519067961,"Yes"]
["Os02g0815200","Os02g0815200","LOC_Os02g57010.1",4.0564604,4.3072453,5.7624865,4.7087307,0.0016394147,229,1.639415E-3,0.00285464971328845,0.0287148190611353,"Yes"]
["Os04g0126500","Os04g0126500","None",3.6143422,4.313999,6.206247,4.7115293,0.007883988,1009,0.007883988,0.01257791074545,0.0313406103746283,"Yes"]
["Os02g0697400","Os02g0697400","LOC_Os02g46970.1",4.940279,2.7830615,6.4277267,4.7170224,0.01407276,1588,0.01407276,0.0197955622039391,0.0355452395214105,"Yes"]
["Os06g0149100","Os06g0149100","LOC_Os06g05630.1",2.880987,4.775669,6.5053353,4.7206635,0.022836924,2263,0.022836924,0.0282099227125405,0.0404767574741493,"Yes"]
["Os03g0244000","Os03g0244000","LOC_Os03g14040.1",5.152112,3.9740791,5.163394,4.763195,0.0008779259,124,0.000877926,1.54574918972824E-3,0.0283980740806451,"Yes"]
["Os10g0516100","Os10g0516100","LOC_Os10g37180.1",5.4815607,3.923296,4.8871603,4.7640057,0.0031715338,439,0.003171534,0.00547245076040887,0.0289772730615034,"Yes"]
["Os02g0543900","Os02g0543900","LOC_Os02g33944.1",4.1452923,4.5431194,5.6230226,4.770478,0.0008804118,126,0.000880412,0.00157068062827225,0.0280264486666666,"Yes"]
["Os08g0380100","Os08g0380100","LOC_Os08g29200.1",4.406968,4.0875854,5.8384795,4.7776775,0.00097337976,140,0.00097338,0.00174520069808027,0.0278873369999999,"Yes"]
["Os05g0313700","Os05g0313700","LOC_Os05g24900.1",5.8831425,4.0176196,4.4552364,4.785333,0.0034939458,486,0.003493946,0.00605833956619297,0.0288358382839506,"Yes"]
["Os06g0156600","Os06g0156600","LOC_Os06g06250.1",4.3453603,4.0527463,5.961312,4.786473,0.050009023,2472,0.026131755,0.0308152580403889,0.0424006752851941,"Yes"]
["Os03g0788600","Os03g0788600","LOC_Os03g57460.1",3.906581,4.7151995,5.7439566,4.788579,0.0064440407,838,0.006444041,0.0104462727499376,0.0308437332350835,"Yes"]
["Os08g0512600","Os08g0512600","LOC_Os08g40170.1",3.983066,5.2897744,5.1663203,4.8130536,3.1828487E-4,50,0.000318285,0.000623285963600099,0.0255328227,"Yes"]
["Os08g0390200","Os08g0390200","LOC_Os08g30080.1",2.2190084,5.7257957,6.60655,4.8504515,0.0218217,2190,0.0218217,0.0272999252056843,0.0399665930136986,"Yes"]
["Os08g0189300","Os08g0189300","LOC_Os08g08980.1",3.934554,6.1417317,4.5181413,4.864809,0.013568356,1543,0.013568356,0.019234604836699,0.0352706908075178,"Yes"]
["Os12g0274700","Os12g0274700","LOC_Os12g17600.1",5.7311306,4.270955,4.593788,4.865291,0.0092787575,1160,0.009278758,0.0144602343555223,0.0320837054637931,"Yes"]
["Os08g0106300","Os08g0106300","LOC_Os08g01520.1",3.379644,5.7478175,5.485993,4.8711514,0.011574082,1373,0.011574082,0.0171154325604587,0.0338118302272396,"Yes"]
["Os03g0118200","Os03g0118200","LOC_Os03g02670.1",4.765841,4.2028985,5.736713,4.9018173,0.0014093466,206,1.409347E-3,0.00256793817003241,0.0274412175582524,"Yes"]
["Os04g0640700","Os04g0640700","LOC_Os04g54810.1",2.3485394,5.4081907,7.0504346,4.935722,0.03389227,2958,0.03389227,0.0368735976065819,0.0459573681440162,"Yes"]
["Os04g0359100","Os04g0359100","LOC_Os04g28990.1",4.4635563,5.1943736,5.249121,4.969017,0.013917683,1573,0.013917683,0.0196085764148591,0.0354887644710743,"Yes"]
["Os11g0267000","Os11g0267000","LOC_Os11g16550.1",4.7816525,4.5674953,5.5861683,4.978439,0.0018241939,264,0.001824194,0.00329094988780852,0.0277153111136363,"Yes"]
["GT_Os_A_Specific_0042496","Os07g0173601","LOC_Os07g07715.1",4.6631255,4.4030466,5.9266863,4.997619,0.0008233996,117,0.0008234,0.00145848915482423,0.028227841025641,"Yes"]
["Os08g0236200","Os11g0275500","LOC_Os11g17540.1",4.0109134,5.0281844,5.9828696,5.0073223,0.0021407926,1041,8.163844E-3,0.012976813762154,0.0314555026743515,"Yes"]
["Os10g0530500","Os10g0530500","LOC_Os10g38710.1",4.571737,4.6242986,5.9129033,5.0363126,0.0043254513,595,0.004325451,0.00741710296684118,0.0291586285058823,"Yes"]
["Os01g0610800","Os01g0610800","LOC_Os01g42510.1",4.289201,5.0889363,5.7313285,5.036489,0.016968394,1824,0.016968394,0.0227374719521316,0.0373137216743421,"Yes"]
["Os04g0457000","Os04g0457000","LOC_Os04g38410.1",5.642165,4.1956186,5.3929396,5.0769076,0.014958223999999999,1658,0.014958223999999999,0.0206681625529793,0.0361866323667068,"Yes"]
["Os06g0304600","Os06g0304600","LOC_Os06g20040.1",4.3642883,5.317662,5.5747976,5.0855823000000004,0.013450086,1529,0.013450086,0.019060084766891,0.035283384529758,"Yes"]
["Os01g0110200","Os01g0110200","LOC_Os01g02010.1",3.5019455,5.547826,6.2077746,5.0858483,0.0038747163,535,0.003874716,6.66915981052106E-3,0.0290495063102803,"Yes"]
["Os07g0176600","Os07g0176600","LOC_Os07g08000.1",2.6144576,6.6693945,6.0319395,5.1052637,0.018409025,1933,0.018409025,0.0240962353527798,0.0381989649637868,"Yes"]
["Os10g0554900","Os10g0554900","LOC_Os10g40620.1",3.9812336,5.0328283,6.4285073,5.1475234,0.018210325,1914,0.018210325,0.0238593866866118,0.0381617625783699,"Yes"]
["Os08g0106000","Os08g0106000","LOC_Os08g01510.1",3.938818,6.1343026,5.3851705,5.1527634,0.011257339,1347,0.011257339,0.0167913238593866,0.0335212967550111,"Yes"]
["Os03g0581400","Os03g0581400","LOC_Os03g38470.1",3.467596,6.2140994,5.785387,5.1556945,0.004493272,621,0.004493272,0.00774121166791324,0.0290217616618357,"Yes"]
["Os07g0567400","Os07g0567400","LOC_Os07g38000.1",3.8550901,5.191602,6.4655147,5.170736,0.002521955,350,0.002521955,0.00436300174520069,0.0289016043,"Yes"]
["GT_Os_A_Specific_0003696","Os09g0544700","LOC_Os09g37260.1",7.5379324,3.3964872,4.622182,5.185534,0.0316513,2824,0.0316513,0.0352031912241336,0.0449551573300283,"Yes"]
["Os10g0111700","Os10g0111700","LOC_Os10g02260.1",4.6380677,4.4727674,6.453838,5.1882243,0.012699682,1466,0.012699682,0.0182747444527549,0.0347465378594815,"Yes"]
["Os04g0401000","Os04g0401000","LOC_Os04g32850.1",5.3203773,4.7729406,5.488055,5.193791,0.0015791922,225,0.001579192,0.00280478683620044,0.0281517293866666,"Yes"]
["Os01g0872600","Os01g0872600","LOC_Os01g65210.1",4.793953,4.5688224,6.2324553,5.1984105,0.0020675764,293,0.002067576,0.00365245574669658,0.0283039158225255,"Yes"]
["Os03g0118600","Os03g0118600","LOC_Os03g02690.1",5.0136657,4.855728,5.763638,5.2110105,0.020999998,2129,0.020999998,0.0265395163300922,0.0395636411357444,"Yes"]
["Os10g0552600","Os10g0552600","LOC_Os10g40510.1",5.9040136,4.110972,5.789278,5.268088,0.010921544,1322,0.010921544,0.0164796808775866,0.0331363940877458,"Yes"]
["Os05g0500000","Os05g0500000","LOC_Os05g42060.1",5.236508,5.2995753,5.307017,5.281033,1.2352816E-3,188,0.001235282,0.00234355522313637,0.0263548728829787,"Yes"]
["Os08g0238200","Os08g0238200","LOC_Os08g14000.1",4.4780016,5.2310495,6.2268906,5.3119807,0.0022350862,311,0.002235086,3.87683869359262E-3,0.0288261413054662,"Yes"]
["Os04g0535200","Os04g0535200","LOC_Os04g45270.1",3.6425753,4.910011,7.417543,5.323376,0.011593266,1377,0.011593266,0.0171652954375467,0.0337694915947712,"Yes"]
["Os11g0559600","Os11g0559600","LOC_Os11g35540.1",6.036998,4.024292,5.974329,5.345206,0.0050798026,696,0.005079803,0.00867614061331338,0.0292745543577586,"Yes"]
["Os05g0589400","Os05g0589400","LOC_Os05g51160.1",3.4265814,5.807285,6.8402247,5.3580303,0.006156632,814,0.006156632,0.0101470954874096,0.0303369176314496,"Yes"]
["Os05g0556400","Os05g0556400","LOC_Os05g48270.1",4.4023943,4.839521,6.9186025,5.386839,0.0060615744,804,0.006061574,0.0100224382946896,0.0302400165597014,"Yes"]
["Os11g0448700","Os11g0448700","LOC_Os11g26190.1",2.6501875,5.901675,7.6511593,5.401007,0.040446673,3313,0.040446673,0.0412989279481426,0.0489681875650467,"Yes"]
["Os10g0529300","Os10g0529300","LOC_Os10g38580.1",3.9984984,4.7697916,7.4355197,5.40127,0.008672671,1099,0.008672671,0.0136998254799301,0.0316524871528662,"Yes"]
["Os02g0299200","Os02g0299200","LOC_Os02g19640.1",4.079511,5.4198794,6.7885227,5.4293046,0.005252233,713,0.005252233,0.00888805784093742,0.0295465730196353,"Yes"]
["Os02g0538700","Os02g0538700","LOC_Os02g33550.1",3.7947698,4.3455687,8.216322,5.4522204,0.021846155,2193,0.021846155,0.0273373223635003,0.0399566473803009,"Yes"]
["Os11g0654100","Os11g0654100","LOC_Os11g43320.1",4.238289,7.045943,5.0822797,5.4555035,0.008487004,1073,0.008487004,0.0133757167788581,0.0317254175619757,"Yes"]
["Os01g0750300","Os01g0750300","LOC_Os01g54620.1",3.548398,6.2389994,6.6001415,5.462513,0.022994883,2273,0.022994883,0.0283345799052605,0.0405774200233172,"Yes"]
["Os05g0215000","Os05g0215000","LOC_Os05g12400.1",4.9025474,5.504833,6.038558,5.4819794,0.00023202524,37,0.000232025,0.000461231613064073,0.0251527641891891,"Yes"]
["Os04g0466000","Os04g0466000","None",5.1462164,5.136493,6.2397685,5.5074925,0.000544095,91,0.000544095,0.00113438045375218,0.0239820334615384,"Yes"]
["Os06g0179000","Os06g0179000","LOC_Os06g08090.1",5.8502884,4.4041944,6.347258,5.533913,2.7512976E-3,388,0.002751298,0.00483669907753677,0.0284418976237113,"Yes"]
["Os03g0215700","Os03g0215700","LOC_Os03g11650.1",4.882699,6.128091,5.7349043,5.5818977,4.85134E-3,668,4.85134E-3,0.00832710047369733,0.0291298274550898,"Yes"]
["Os05g0408900","Os05g0408900","LOC_Os05g33840.1",5.081231,5.433858,6.2420044,5.5856977,0.00050120964,83,0.00050121,0.00103465469957616,0.0242211242168674,"Yes"]
["Os09g0246300","Os09g0246300","LOC_Os09g07154.1",5.6522193,4.45651,6.704648,5.6044593,0.0014369624,209,1.436962E-3,0.00260533532784841,0.0275772946507177,"Yes"]
["Os07g0287400","Os07g0287400","LOC_Os07g18750.1",4.6966558,4.936863,7.234531,5.622683,0.005891358,791,0.005891358,0.00986038394415357,0.0298738772920354,"Yes"]
["Os07g0157600","Os07g0157600","LOC_Os07g06380.1",3.9627109,6.799121,6.1356373,5.6324897,0.00591967,793,0.00591967,0.00988531538269758,0.0299417356494325,"Yes"]
["Os03g0399900","Os03g0399900","LOC_Os03g28170.1",5.330537,4.79679,6.8523026,5.6598763,0.0010743052,159,1.074305E-3,1.98204936424831E-3,0.0271008638679245,"Yes"]
["Os04g0305700","Os04g0305700","LOC_Os04g24110.1",4.4103,5.216822,7.625608,5.75091,0.004070927,560,0.004070927,0.00698080279232111,0.0291580146375,"Yes"]
["GT_Os_A_Specific_0182257","Os02g0193732","LOC_Os02g10030.1",4.6187396,6.7227683,5.978958,5.7734885,0.0098754605,1218,0.009875461,0.0151832460732984,0.0325209146724137,"Yes"]
["Os09g0248100","Os09g0248100","LOC_Os09g07350.1",4.8645396,5.3103023,7.302961,5.825934,0.0049483282,679,0.004948328,0.00846422338568935,0.0292308447835051,"Yes"]
["Os08g0189200","Os08g0189200","LOC_Os08g08970.1",5.0194616,8.238788,4.3118253,5.8566914,0.032151137,2867,0.032151137,0.0357392171528297,0.0449801920149982,"Yes"]
["Os07g0510500","Os07g0510500","LOC_Os07g32630.1",4.6543255,4.9898825,8.0195055,5.8879046,0.0054612923,744,0.005461292,0.00927449513836948,0.0294425298548387,"Yes"]
["Os05g0515600","Os05g0515600","LOC_Os05g43940.1",2.772634,6.6916986,8.26231,5.9088807,0.036860235,3118,0.036860235,0.0388681126901022,0.0474170630484284,"Yes"]
["Os06g0218600","Os06g0218600","LOC_Os06g11490.1",4.051928,5.8946004,7.8418903,5.9294724,0.033493385,2938,0.033493385,0.0366242832211418,0.0457256525646698,"Yes"]
["Os03g0243900","Os03g0243900","LOC_Os03g14030.1",4.0138383,5.8607817,7.9444838,5.939701,0.015277226,1678,0.015277226,0.0209174769384193,0.0365178507067938,"Yes"]
["Os04g0408600","Os04g0408600","LOC_Os04g33450.1",4.6506834,5.3629766,7.923115,5.978925,0.0044172765,611,0.004417277,0.00761655447519321,0.0289978691440261,"Yes"]
["Os09g0248900","Os09g0248900","LOC_Os09g07440.1",4.3619275,6.22948,7.412695,6.0013676,0.0030277725,419,0.003027773,5.22313637496883E-3,0.0289842422505966,"Yes"]
["Os05g0550300","Os05g0550300","LOC_Os05g47700.1",4.5386157,4.9647613,8.515143,6.0061736,0.032607574,2885,0.032607574,0.0359636000997257,0.0453341349441941,"Yes"]
["Os10g0467800","Os10g0467800","LOC_Os10g32980.1",4.311481,6.5701647,7.202196,6.027947,0.004194002,573,0.004194002,7.14285714285714E-3,0.0293580139999999,"Yes"]
["Os07g0510400","Os07g0510400","LOC_Os07g32620.1",3.4804196,6.0056825,8.642397,6.042833,0.03250756,2881,0.03250756,0.0359137372226377,0.0452578351822283,"Yes"]
["Os11g0644700","Os11g0644700","LOC_Os11g42500.1",2.8269567,7.0197725,8.596388,6.1477056,0.026491009,2491,0.026491009,0.0310521067065569,0.0426557354873544,"Yes"]
["Os04g0454200","Os04g0454200","LOC_Os04g38220.1",5.048519,5.525879,7.917943,6.1641135,0.0045156414,625,0.004515641,0.00779107454500124,0.0289795776816,"Yes"]
["Os04g0554800","Os04g0554800","LOC_Os04g46830.1",4.7806706,5.642114,8.098007,6.1735973,0.003377373,472,0.003377373,0.00588381949638494,0.0287005150487288,"Yes"]
["GT_Os_A_Specific_0037994","Os03g0251000","LOC_Os03g14654.1",6.7284727,5.4825068,6.351696,6.1875587,0.00018120787,34,0.000211483,0.000423834455248067,0.0249487739117647,"Yes"]
["Os09g0459900","Os09g0459900","LOC_Os09g28580.1",6.0633254,5.2788825,7.401915,6.248041,0.0006889915,102,0.000688992,0.0012715033657442,0.0270935971764705,"Yes"]
["Os04g0459500","Os04g0459500","LOC_Os04g38600.1",6.7204475,5.5445814,6.6149683,6.2933326,0.00076745043,113,0.00076745,0.00140862627773622,0.0272410792035398,"Yes"]
["Os10g0536500","Os10g0536500","LOC_Os10g39150.1",6.4250555,5.8309574,6.7570267,6.3376794,0.0009054476,129,9.05448E-4,0.00160807778608825,0.0281531157209302,"Yes"]
["Os06g0589500","Os06g0589500","LOC_Os06g38960.1",5.196406,6.723489,7.137739,6.352545,7.5821355E-3,972,0.007582136,0.0121166791323859,0.0312880118271605,"Yes"]
["Os10g0317900","Os10g0317900","LOC_Os10g16974.1",5.1315103,6.261717,7.7105246,6.3679175,0.018619796,1948,0.018619796,0.0242832211418598,0.0383388099363449,"Yes"]
["Os06g0102100","Os06g0102100","LOC_Os06g01250.1",6.033545,5.4429345,7.712037,6.396172,0.0008019816,115,0.000801982,1.43355771628022E-3,0.0279717374086956,"Yes"]
["Os04g0629700","Os04g0629700","LOC_Os04g53760.1",4.859498,6.0988507,8.420702,6.459684,9.237192E-3,1154,9.237192E-3,0.0143854400398903,0.0321060460242634,"Yes"]
["Os12g0291200","Os12g0291200","None",7.136791,5.535927,6.711568,6.461428,0.0012902886,194,1.290289E-3,0.00241834953876838,0.0266770576237113,"Yes"]
["Os10g0552700","Os10g0552700","LOC_Os10g40520.1",6.6666,5.6833296,7.187565,6.5124984,0.0005189985,87,0.000518999,0.00108451757666417,0.0239276435517241,"Yes"]
["Os03g0399800","Os03g0399800","LOC_Os03g28160.1",6.5115356,5.31765,7.8803186,6.569834,0.0026203862,367,0.002620386,0.00457491897282473,0.0286386055749318,"Yes"]
["Os02g0148000","Os02g0148000","LOC_Os02g05470.1",5.0252495,7.15063,7.6742907,6.6167235,0.0015199402,218,1.51994E-3,0.00271752680129643,0.027965501559633,"Yes"]
["Os02g0578400","Os02g0578400","LOC_Os02g36850.1",6.006985,6.4215455,7.4820485,6.63686,0.005505519,748,0.005505519,0.00932435801545749,0.0295222415895721,"Yes"]
["Os12g0292400","Os12g0292400","LOC_Os12g19470.1",7.788579,6.0593376,6.1049204,6.6509457,0.0005010763,82,0.000501076,0.00102218898030416,0.0245099492195121,"Yes"]
["Os11g0592600","Os11g0592600","LOC_Os11g38010.1",5.765285,6.360142,7.87277,6.6660657,0.0026451654,373,0.002645165,4.64971328845674E-3,0.0284443882439678,"Yes"]
["Os01g0850700","Os01g0850700","LOC_Os01g63190.1",6.6671734,6.309225,7.136544,6.7043138,0.0014378449,210,0.001437845,0.00261780104712041,0.0274628395,"Yes"]
["GT_Os_A_Specific_0030103","Os02g0308800","LOC_Os02g20560.1",4.1994634,4.7407107,11.221359,6.720511,0.03610319,3091,0.036484737,0.0385315382697581,0.0473439922701391,"Yes"]
["Os04g0337500","Os04g0337500","LOC_Os04g26870.1",4.5801334,7.2774014,8.349728,6.735754,0.0065724785,859,6.572479E-3,0.0107080528546497,0.0306894217334109,"Yes"]
["Os05g0190500","Os05g0190500","LOC_Os05g10210.1",3.1304827,6.9134283,10.470948,6.838286,0.029281134,2659,0.029281134,0.0331463475442533,0.044169472912373,"Yes"]
["Os08g0489300","Os08g0489300","LOC_Os08g38170.1",5.195168,6.8037825,8.746801,6.915251,0.005530958,751,0.005530958,0.00936175517327349,0.0295401764820239,"Yes"]
["Os12g0291400","Os12g0291400","LOC_Os12g19381.1",7.4677577,6.4137826,7.361939,7.0811596,2.248121E-4,36,0.000224812,0.000448765893792071,0.0250478036666666,"Yes"]
["Os03g0128000","Os03g0128000","LOC_Os03g03600.1",6.1269464,6.6011133,8.641624,7.123228,0.008985649,1131,0.008985649,0.0140987284966342,0.0318668772228116,"Yes"]
["Os03g0368900","Os03g0368900","LOC_Os03g25330.1",5.392248,7.4287395,8.721655,7.180881,0.009092164,1139,0.009092164,0.0141984542508102,0.0320181473257243,"Yes"]
["Os07g0106700","Os07g0106700","LOC_Os07g01600.1",6.261171,7.438713,8.237412,7.312433,0.016176574,1754,0.016176574,0.0218648716030915,0.0369921541128848,"Yes"]
["Os05g0189900","Os05g0189900","LOC_Os05g09724.1",5.4533706,8.409834,8.197439,7.353548,0.0016404056,230,0.001640406,0.00286711543256045,0.0286072542,"Yes"]
["Os02g0192700","Os02g0192700","LOC_Os02g09940.1",7.1747646,6.5181046,8.690219,7.461029,0.00043045153,69,4.30452E-4,0.000860134629768137,0.0250223619130434,"Yes"]
["Os05g0456300","Os05g0456300","LOC_Os05g38230.1",5.019027,8.330068,9.150834,7.4999757,0.020257287,2083,0.020257287,0.0259660932435801,0.0390071906658665,"Yes"]
["Os06g0118700","Os06g0118700","LOC_Os06g02780.1",6.0953746,7.289424,9.27432,7.5530396,0.007279975,941,0.007279975,0.0117302418349538,0.0310307967321997,"Yes"]
["Os06g0174700","Os06g0174700","None",7.0251565,6.511692,9.164225,7.567024,0.0008425836,120,0.000842584,1.49588631264023E-3,0.0281633701999999,"Yes"]
["Os01g0106300","Os01g0106300","LOC_Os01g01650.1",5.129036,8.066014,10.012943,7.7359977,0.0058004023,781,0.005800402,0.00973572675143355,0.0297892604635083,"Yes"]
["Os11g0241700","Os11g0241700","LOC_Os11g13750.1",6.163557,8.637201,8.593336,7.7980313,0.0022450427,314,2.245043E-3,0.00391423585140862,0.028677921888535,"Yes"]
["Os03g0806800","Os03g0806800","LOC_Os03g59210.1",6.782034,7.6751623,9.043186,7.8334603,2.4109366E-3,332,0.002410937,0.00413861879830466,0.0291273141777108,"Yes"]
["Os06g0289900","Os06g0289900","LOC_Os06g18670.1",6.71208,7.142248,9.773715,7.8760147,0.00422719,578,0.00422719,0.00720518573921715,0.0293343582871972,"Yes"]
["Os07g0204400","Os07g0204400","LOC_Os07g10440.1",7.0799336,7.419943,9.209365,7.90308,0.00076290936,112,0.000762909,1.39616055846422E-3,0.0273216785625,"Yes"]
["Os08g0460000","Os08g0460000","LOC_Os08g35760.1",8.5273485,6.55904,8.720834,7.935741,0.0008499975,121,0.000849998,0.00150835203191224,0.028176379983471,"Yes"]
["Os01g0294700","Os01g0294700","LOC_Os01g19020.1",7.1948223,7.7119513,9.08338,7.996718,0.0004831706,80,0.000483171,0.000997257541760159,0.0242249860125,"Yes"]
["Os09g0538000","Os09g0538000","LOC_Os09g36700.1",7.601088,7.7912126,8.721891,8.038064,0.00036734974,58,0.00036735,0.000723011717776115,0.0254041525862069,"Yes"]
["Os01g0720500","Os01g0720500","LOC_Os01g52240.1",9.021717,7.6112094,8.395962,8.342963,0.0009237344,132,0.000923734,0.00164547494390426,0.0280689172272727,"Yes"]
["Os02g0781400","Os02g0781400","LOC_Os02g54060.1",7.622551,7.893255,9.804011,8.439939,0.00026098936,39,0.000260989,0.000486163051608077,0.0268417148461538,"Yes"]
["Os11g0645400","Os11g0645400","LOC_Os11g42550.1",5.238335,9.866922,11.592663,8.899306,0.017465465,1861,0.017465465,0.0231987035651957,0.0376431918941429,"Yes"]
["Os12g0573600","Os12g0573600","None",9.474131,8.861982,9.645514,9.3272085,1.7406559e-05,9,1.74066E-5,0.000112191473448017,0.0077575414,"Yes"]
["Os01g0878900","Os01g0878900","LOC_Os01g65690.1",6.821982,10.203001,11.592693,9.539226,0.009148006,1143,0.009148006,0.0142483171278982,0.0321020578005249,"Yes"]
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{"sheet":"Table S2 UP&DN DEGs in WT & d1","index":1,"n_rows":2897,"n_cols":22,"rows_kept":2897}
["Supplementary Table S2.  List of common and unique differentially expressed genes (DEGs) identified from nitrate-responsive leaf transcriptomes developed in RGA1 mutant (d1) and its corresponding wild type in rice."]
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[{"$nulls":11},"Os11g0209000"]
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[{"$nulls":11},"Os10g0490800"]
[{"$nulls":11},"Os01g0692100"]
[{"$nulls":11},"Os10g0365200"]
[{"$nulls":11},"Os04g0321100"]
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[{"$nulls":11},"Os07g0643000"]
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[{"$nulls":11},"Os05g0331200"]
[{"$nulls":11},"Os03g0154000"]
[{"$nulls":11},"Os09g0552600"]
[{"$nulls":11},"Os03g0604566"]
[{"$nulls":11},"Os03g0604500"]
[{"$nulls":11},"Os06g0228500"]
[{"$nulls":11},"Os04g0282400"]
[{"$nulls":11},"Os08g0507100"]
[{"$nulls":11},"Os10g0528300"]
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{"sheet":"Table S3 AgriGO WT FDR","index":2,"n_rows":23929,"n_cols":20,"rows_kept":23929,"merged":[[2,0,2,6],[2,8,2,14]]}
["Supplementary Table S3. Gene ontology (GO) enrichment analyses of up-regulated and down-regulated genes identified in WT leaf treated with nitrate using AgriGO2.0 (http://systemsbiology.cau.edu.cn/agriGov2/)."]
[]
["Up-regulated DEGs (AgriGO2.0) in WT",{"$nulls":7},"Down-regulated DEGs (AgriGO2.0) in WT",{"$nulls":7},"Nitrate_DEGs in WT from previous and current transcriptome datasets (Coneva et al., 2014; Misyura et al., 2014; Sawaki et al., 2013; Shin et al., 2018; Yang et al., 2015; Mandal et al., 2022)","RGA1_DEGs from previous Transcriptome data (Ferrero‐Serrano et al., 2018; Pathak et al., 2021)","RGA1_DEGs from proteome data (Peng et al., 2019; https://doi.org/10.3390/ijms20010167)","RGA1_nitrate DEGs in the current study"]
["GO term","Ontology","Description","Number in input list","Number in BG/Ref","p-value","FDR",null,"GO term","Ontology","Description","Number in input list","Number in BG/Ref","p-value","FDR",null,"Os01g0652000","Os12g0637700","Os01g0662700","Os03g0228200"]
["GO:0044262","P","cellular carbohydrate metabolic process",76,274,{"v":2.1e-11,"d":"2.10E-11"},{"v":4.4e-08,"d":"4.40E-08"},null,"GO:0006412","P","translation",95,480,{"v":8.8e-06,"d":"8.80E-06"},0.016,null,"Os08g0473900","Os12g0615100","Os01g0772200","Os03g0785900"]
["GO:0005975","P","carbohydrate metabolic process",139,713,{"v":1e-09,"d":"1.00E-09"},{"v":1.1e-06,"d":"1.10E-06"},null,"GO:0006457","P","protein folding",42,159,{"v":1.4E-5,"d":"1.40E-05"},0.016,null,"Os12g0248600","Os12g0609600","Os02g0225000","Os05g0527000"]
["GO:0034641","P","cellular nitrogen compound metabolic process",60,252,{"v":2.7e-07,"d":"2.70E-07"},0.00019,null,"GO:0051179","P","localization",217,1361,{"v":3.5e-05,"d":"3.50E-05"},0.021,null,"Os05g0320500","Os12g0601800","Os02g0606800","Os03g0724500"]
["GO:0008152","P","metabolic process",983,8041,{"v":7.1e-06,"d":"7.10E-06"},0.0037,null,"GO:0065002","P","intracellular protein transmembrane transport",10,12,{"v":3.5e-05,"d":"3.50E-05"},0.021,null,"Os04g0678700","Os12g0596300","Os02g0654500","Os02g0217900"]
["GO:0006006","P","glucose metabolic process",29,100,{"v":1.6e-05,"d":"1.60E-05"},0.0058,null,"GO:0042254","P","ribosome biogenesis",19,49,{"v":5.9e-05,"d":"5.90E-05"},0.025,null,"Os05g0562800","Os12g0552700","Os03g0800100","Os05g0196100"]
["GO:0019318","P","hexose metabolic process",33,123,{"v":1.7E-5,"d":"1.70E-05"},0.0058,null,"GO:0006810","P","transport",211,1332,{"v":6.3E-5,"d":"6.30E-05"},0.025,null,"Os12g0573600","Os12g0541700","Os04g0105100","Os11g0668300"]
["GO:0009755","P","hormone-mediated signaling pathway",28,100,{"v":3.7e-05,"d":"3.70E-05"},0.0079,null,"GO:0051234","P","establishment of localization",211,1337,{"v":7.6e-05,"d":"7.60E-05"},0.026,null,"Os11g0525600","Os12g0538700","Os04g0234750","Os11g0625900"]
["GO:0070887","P","cellular response to chemical stimulus",31,116,{"v":3.1e-05,"d":"3.10E-05"},0.0079,null,"GO:0022613","P","ribonucleoprotein complex biogenesis",19,52,1.1E-4,0.033,null,"Os08g0174500","Os12g0503000","Os04g0282400","Os02g0601500"]
["GO:0032870","P","cellular response to hormone stimulus",28,100,{"v":3.7e-05,"d":"3.70E-05"},0.0079,null,"GO:0007005","P","mitochondrion organization",9,12,0.00015,0.038,null,"Os06g0505700","Os12g0502800","Os04g0414700","osa-miR439d"]
["GO:0009734","P","auxin mediated signaling pathway",23,71,{"v":2.8E-5,"d":"2.80E-05"},0.0079,null,"GO:0033036","P","macromolecule localization",60,296,0.00021,0.038,null,"Os05g0227600","Os12g0484700","Os04g0591000","Os01g0540800"]
["GO:0044042","P","glucan metabolic process",28,106,{"v":8.8e-05,"d":"8.80E-05"},0.017,null,"GO:0051186","P","cofactor metabolic process",36,146,0.00018,0.038,null,"Os03g0570800","Os12g0438600","Os04g0663700","Os02g0574100"]
["GO:0044275","P","cellular carbohydrate catabolic process",25,90,1.1E-4,0.019,null,"GO:0034613","P","cellular protein localization",39,165,0.00021,0.038,null,"Os07g0618400","Os12g0429200","Os05g0101200","Os01g0224700"]
["GO:0016052","P","carbohydrate catabolic process",35,156,0.00021,0.029,null,"GO:0070727","P","cellular macromolecule localization",39,165,0.00021,0.038,null,"Os08g0130400","Os12g0423484","Os05g0101400","Os04g0516800"]
["GO:0034637","P","cellular carbohydrate biosynthetic process",24,89,0.00021,0.029,null,"GO:0019725","P","cellular homeostasis",32,125,0.00022,0.038,null,"Os03g0329500","Os12g0405100","Os05g0274900","osa-miR439b"]
["GO:0005996","P","monosaccharide metabolic process",36,162,0.0002,0.029,{"$nulls":9},"Os05g0589200","Os12g0292400","Os05g0333200","Os10g0527800"]
["GO:0006073","P","cellular glucan metabolic process",24,90,0.00024,0.03,{"$nulls":9},"Os07g0277600","Os12g0291400","Os05g0496200","Os11g0626700"]
["GO:0006066","P","alcohol metabolic process",43,210,0.00024,0.03,{"$nulls":9},"Os01g0827700","Os12g0267900","Os05g0560000","Os03g0188100"]
["GO:0006629","P","lipid metabolic process",85,516,3.5E-4,0.04,{"$nulls":9},"Os05g0131900","Os12g0267200","Os06g0127000","Os04g0447700"]
["GO:0007017","P","microtubule-based process",24,93,0.00036,0.04,{"$nulls":9},"Os01g0857500","Os12g0266000","Os06g0320500","Os01g0176000"]
["GO:0044264","P","cellular polysaccharide metabolic process",24,94,0.00041,0.044,{"$nulls":9},"Os02g0115700","Os12g0263200","Os06g0357000","Os02g0774200"]
["GO:0009733","P","response to auxin stimulus",23,89,0.00047,0.047,{"$nulls":9},"Os07g0501800","Os12g0225900","Os06g0634300","Os09g0491772"]
[{"$nulls":16},"Os03g0749500","Os12g0210400","Os08g0504500","Os10g0344500"]
[{"$nulls":16},"Os03g0586400","Os12g0207600","Os08g0512500","Os07g0112700"]
[{"$nulls":16},"Os01g0229400","Os12g0194900","Os08g0541400","Os10g0573900"]
[{"$nulls":16},"Os01g0750500","Os12g0189900","Os09g0110300","Os03g0580200"]
[{"$nulls":16},"Os03g0251000","Os12g0189400","Os09g0505700","Os03g0201000"]
[{"$nulls":16},"Os03g0162900","Os12g0188700","Os09g0514900","Os12g0172400"]
[{"$nulls":16},"Os12g0291400","Os12g0170300","Os09g0557700","Os02g0166200"]
[{"$nulls":16},"Os05g0215000","Os12g0168700","Os11g0171300","Os01g0949700"]
[{"$nulls":16},"Os05g0215033","Os12g0168000","Os02g0593500","Os03g0673400"]
[{"$nulls":16},"Os02g0781400","Os12g0157200","Os09g0493600","osa-miR169f"]
[{"$nulls":16},"Os04g0404900","Os12g0151500","Os01g0101200","Os01g0944900"]
[{"$nulls":16},"Os04g0296700","Os12g0121300","Os01g0176000","Os09g0400400"]
[{"$nulls":16},"Os04g0127800","Os12g0117600","Os01g0229100","Os11g0470500"]
[{"$nulls":16},"Os04g0649200","Os12g0116000","Os01g0231700","Os10g0515100"]
[{"$nulls":16},"Os08g0116900","Os12g0108500","Os01g0290100","Os05g0555600"]
[{"$nulls":16},"Os10g0113100","Os12g0106600","Os01g0357100","Os04g0103601"]
[{"$nulls":16},"Os01g0127700","Os12g0103000","Os01g0501800","Os06g0697200"]
[{"$nulls":16},"Os05g0217800","Os12g0102300","Os01g0589800","osa-miR439g"]
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[{"$nulls":16},"Os09g0538000","Os11g0638900","Os01g0937400","Os07g0663000"]
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[{"$nulls":16},"Os04g0447566"]
[{"$nulls":16},"Os06g0167600"]
[{"$nulls":16},"Os04g0423700"]
[{"$nulls":16},"Os03g0554950"]
[{"$nulls":16},"Os01g0950300"]
[{"$nulls":16},"Os06g0623600"]
[{"$nulls":16},"Os09g0322000"]
[{"$nulls":16},"Os03g0664700"]
[{"$nulls":16},"Os01g0728900"]
[{"$nulls":16},"Os05g0488100"]
[{"$nulls":16},"Os02g0710900"]
[{"$nulls":16},"Os09g0473400"]
[{"$nulls":16},"Os03g0311000"]
[{"$nulls":16},"Os02g0255400"]
[{"$nulls":16},"Os06g0343600"]
[{"$nulls":16},"Os08g0109200"]
[{"$nulls":16},"Os12g0641500"]
[{"$nulls":16},"Os06g0182400"]
[{"$nulls":16},"Os01g0801700"]
[{"$nulls":16},"Os05g0330700"]
[{"$nulls":16},"Os08g0242900"]
[{"$nulls":16},"Os01g0114100"]
[{"$nulls":16},"Os07g0673000"]
[{"$nulls":16},"Os07g0120400"]
[{"$nulls":16},"Os05g0403600"]
[{"$nulls":16},"Os05g0506400"]
[{"$nulls":16},"Os08g0557900"]
[{"$nulls":16},"Os01g0604700"]
[{"$nulls":16},"Os11g0473000"]
[{"$nulls":16},"Os01g0853000"]
[{"$nulls":16},"Os02g0820300"]
[{"$nulls":16},"Os03g0385900"]
[{"$nulls":16},"Os06g0611400"]
[{"$nulls":16},"Os01g0262401"]
[{"$nulls":16},"Os10g0431000"]
[{"$nulls":16},"Os05g0120800"]
[{"$nulls":16},"Os01g0884200"]
[{"$nulls":16},"Os03g0219400"]
[{"$nulls":16},"Os12g0105500"]
[{"$nulls":16},"Os03g0376000"]
[{"$nulls":16},"Os08g0490400"]
[{"$nulls":16},"Os07g0634300"]
[{"$nulls":16},"Os08g0334500"]
[{"$nulls":16},"Os01g0591000"]
[{"$nulls":16},"Os06g0186900"]
[{"$nulls":16},"Os07g0118800"]
[{"$nulls":16},"Os07g0670000"]
[{"$nulls":16},"Os07g0668200"]
[{"$nulls":16},"Os09g0332700"]
[{"$nulls":16},"Os06g0722700"]
[{"$nulls":16},"Os07g0188100"]
[{"$nulls":16},"Os07g0124650"]
[{"$nulls":16},"Os01g0951500"]
[{"$nulls":16},"Os07g0162400"]
[{"$nulls":16},"Os11g0170300"]
[{"$nulls":16},"Os07g0503300"]
[{"$nulls":16},"Os11g0208900"]
[{"$nulls":16},"Os01g0311500"]
[{"$nulls":16},"Os06g0581701"]
[{"$nulls":16},"Os01g0764400"]
[{"$nulls":16},"Os06g0138200"]
[{"$nulls":16},"Os02g0601800"]
[{"$nulls":16},"Os04g0516701"]
[{"$nulls":16},"Os07g0677350"]
[{"$nulls":16},"Os10g0188100"]
[{"$nulls":16},"Os06g0678200"]
[{"$nulls":16},"Os01g0872400"]
[{"$nulls":16},"Os11g0124300"]
[{"$nulls":16},"Os03g0232000"]
[{"$nulls":16},"Os01g0636300"]
[{"$nulls":16},"Os06g0724700"]
[{"$nulls":16},"Os03g0594700"]
[{"$nulls":16},"Os12g0552550"]
[{"$nulls":16},"Os08g0521100"]
[{"$nulls":16},"Os04g0652300"]
[{"$nulls":16},"Os06g0723900"]
[{"$nulls":16},"Os01g0516600"]
[{"$nulls":16},"Os12g0122000"]
[{"$nulls":16},"Os07g0643100"]
[{"$nulls":16},"Os07g0598300"]
[{"$nulls":16},"Os08g0422500"]
[{"$nulls":16},"Os05g0583400"]
[{"$nulls":16},"Os09g0453700"]
[{"$nulls":16},"Os05g0324000"]
[{"$nulls":16},"Os10g0365050"]
[{"$nulls":16},"Os02g0217200"]
[{"$nulls":16},"Os02g0792800"]
[{"$nulls":16},"Os06g0634300"]
[{"$nulls":16},"Os03g0675100"]
[{"$nulls":16},"Os09g0344800"]
[{"$nulls":16},"Os04g0482700"]
[{"$nulls":16},"Os09g0407300"]
[{"$nulls":16},"Os03g0371400"]
[{"$nulls":16},"Os03g0765000"]
[{"$nulls":16},"Os10g0389100"]
[{"$nulls":16},"Os02g0111200"]
[{"$nulls":16},"Os03g0848200"]
[{"$nulls":16},"Os04g0596300"]
[{"$nulls":16},"Os07g0161900"]
[{"$nulls":16},"Os04g0608700"]
[{"$nulls":16},"Os11g0600900"]
[{"$nulls":16},"Os06g0178400"]
[{"$nulls":16},"Os07g0666600"]
[{"$nulls":16},"Os09g0461900"]
[{"$nulls":16},"Os11g0105300"]
[{"$nulls":16},"Os03g0698350"]
[{"$nulls":16},"Os07g0601100"]
[{"$nulls":16},"Os12g0514000"]
[{"$nulls":16},"Os04g0437900"]
[{"$nulls":16},"Os01g0176900"]
[{"$nulls":16},"Os11g0209000"]
[{"$nulls":16},"Os04g0657300"]
[{"$nulls":16},"Os01g0945300"]
[{"$nulls":16},"Os02g0591600"]
[{"$nulls":16},"Os03g0663500"]
[{"$nulls":16},"Os10g0101100"]
[{"$nulls":16},"Os05g0215300"]
[{"$nulls":16},"Os11g0540600"]
[{"$nulls":16},"Os05g0366800"]
[{"$nulls":16},"Os10g0138100"]

{"sheet":"Table S4 AgriGO, gProf & EXPath","index":3,"n_rows":986,"n_cols":167,"rows_kept":986,"merged":[[0,33,0,41],[0,43,0,51],[0,53,0,67],[0,69,0,84],[0,86,0,91],[0,93,0,106],[0,108,0,120],[0,123,0,138],[0,140,0,149],[0,152,0,158],[0,160,0,166],[2,1,2,7],[2,9,2,15],[2,17,2,23],[2,25,2,31],[2,69,2,70],[2,71,2,72],[2,73,2,74],[2,75,2,76],[2,77,2,78],[2,79,2,80],[2,81,2,82],[2,83,2,84],[2,108,2,109],[2,110,2,111],[2,112,2,113],[2,114,2,115],[2,116,2,117],[2,118,2,119],[2,120,2,121]]}
["Supplementary Table S4. Gene ontology (GO) enrichment analyses of up-regulated and down-regulated genes identified in d1 leaf treated with nitrate using AgriGO2.0, ExPath 2.0 and g:Profiler.",{"$nulls":32},"GO Terms associated with Upregulated nitrate-responsive DEGs in d1 by gProfiler",{"$nulls":9},"GO Terms associated with Downregulated nitrate-responsive DEGs in d1 by gProfiler",{"$nulls":9},"15 elements included exclusively in \"RGA1 Down AgriGO\":",{"$nulls":15},"8 common elements in \"RGA1 Down AgriGO\" and \"WT Down AgriGO\":",{"$nulls":16},"6 elements included exclusively in \"WT DOWN AgriGo\"",{"$nulls":6},"14 elements included exclusively in \"WT Up AgriGo\":",{"$nulls":14},"7 common elements in \"WT Up AgriGo\" and \"d1 Up AgriGo\":",{"$nulls":14},"16 elements included exclusively in \"d1 Up AgriGo\":",{"$nulls":16},"AgriGO analyses revealed that the unique 2474 RGA1-regulated, nitrate-responsive  DEGs belonged to following processes ",{"$nulls":11},"RevigoTreeMap_RGA1_unique",{"$nulls":7},"RevigoTreeMap_RGA1_and_Nitr_common"]
[{"$nulls":140},"GO_acc","term_type","Term","queryitem","querytotal","bgitem","bgtotal","pvalue","FDR","entries",null,null,"TermID"," Name"," Frequency"," Value"," Uniqueness"," Dispensability"," Representative",null,"TermID"," Name"," Frequency"," Value"," Uniqueness"," Dispensability"," Representative"]
[null,"GO Terms associated with Upregulated nitrate-responsive DEGs in d1 by AgriGO",{"$nulls":7},"GO Terms associated with Downregulated nitrate-responsive DEGs in d1 by AgriGO",{"$nulls":7},"GO Terms associated with Upregulated nitrate-responsive DEGs in d1 by EXPath",{"$nulls":7},"GO Terms associated with Downregulated nitrate-responsive DEGs in d1 by EXPath",{"$nulls":7},"source","term_name","term_id","adjusted_p_value","negative_log10_of_adjusted_p_value","term_size","query_size","intersection_size","effective_domain_size",null,"source","term_name","term_id","adjusted_p_value","negative_log10_of_adjusted_p_value","term_size","query_size","intersection_size","effective_domain_size",null,"protein localization","establishment of protein localization","protein transport","intracellular protein transport","cellular protein metabolic process","vesicle-mediated transport","intracellular transport","small GTPase mediated signal transduction","homeostatic process","cell redox homeostasis","ARF protein signal transduction","regulation of ARF protein signal transduction","regulation of biological quality","cellular localization","establishment of localization in cell",null,"macromolecule localization",null,"protein folding",null,"localization",null,"transport",null,"establishment of localization",null,"cellular macromolecule localization",null,"cellular protein localization",null,"cellular homeostasis",null,null,"translation","intracellular protein transmembrane transport","ribosome biogenesis","ribonucleoprotein complex biogenesis","mitochondrion organization","cofactor metabolic process",null,"metabolic process","glucose metabolic process","hexose metabolic process","hormone-mediated signaling pathway","cellular response to chemical stimulus","cellular response to hormone stimulus","auxin mediated signaling pathway","cellular carbohydrate catabolic process","carbohydrate catabolic process","monosaccharide metabolic process","alcohol metabolic process","lipid metabolic process","microtubule-based process","response to auxin stimulus",null,"cellular carbohydrate metabolic process",null,"carbohydrate metabolic process",null,"cellular nitrogen compound metabolic process",null,"glucan metabolic process",null,"cellular carbohydrate biosynthetic process",null,"cellular glucan metabolic process",null,"cellular polysaccharide metabolic process",null,null,"photosynthesis","photosynthesis, light harvesting","photosynthesis, light reaction","heterocycle biosynthetic process","porphyrin biosynthetic process","porphyrin metabolic process","tetrapyrrole biosynthetic process","tetrapyrrole metabolic process","starch metabolic process","carbohydrate biosynthetic process","cellular nitrogen compound biosynthetic process","glucan biosynthetic process","starch biosynthetic process","chlorophyll biosynthetic process","cellular polysaccharide biosynthetic process","chlorophyll metabolic process",null,"GO:0034641","P","cellular nitrogen compound metabolic process",41,1833,252,23155,{"v":5.1E-5,"d":"5.10E-05"},0.084,"// Os01g0528300 // Os06g0677400 // Os03g0391400 // Os02g0623500 // Os01g0743400 // Os11g0629500 // Os02g0296800 // Os03g0146400 // Os02g0510200 // Os12g0210200 // Os01g0848200 // Os01g0622300 // Os04g0405800 // Os04g0550500 // Os09g0565700 // Os12g0540900 // Os03g0826500 // Os07g0176900 // Os04g0177400 // Os07g0485400 // Os01g0232700 // Os08g0424500 // Os01g0221900 // Os03g0337600 // Os03g0781400 // Os04g0640600 // Os02g0562700 // Os06g0704600 // Os05g0455700 // Os05g0349700 // Os08g0532200 // Os06g0564500 // Os03g0712800 // Os05g0455500 // Os01g0652600 // Os06g0132400 // Os12g0446900 // Os03g0679700 // Os11g0610900 // Os05g0517500 // Os09g0436500 ",null,null,"GO:0008152"," \"metabolic process\"",60.5596218240454,-12.8860566476932,1,0," null",null,"GO:0006869"," \"lipid transport\"",0.461289676848953,-4.46852108295774,0.955075827067258,0," null"]
[null,"GO term","Ontology","Description","Number in input list","Number in BG/Ref","p-value","FDR",null,"GO term","Ontology","Description","Number in input list","Number in BG/Ref","p-value","FDR",null,"GO ID","GO term","GO category","Hit number(Query)","Percentage in query","p-value","False discovery rate",null,"GO ID","GO term","GO category","Hit number(Query)","Percentage in query","p-value","False discovery rate",null,"GO:MF","fructose 1,6-bisphosphate 1-phosphatase activity","GO:0042132",3.61658622987952e-05,4.44170117560643,5,739,5,18096,null,"GO:MF","unfolded protein binding","GO:0051082",{"v":1.34580502333409e-09,"d":"1.35E-09"},8.8710178549885,156,726,29,18096,null,"Os01g0253300","Os01g0253300","Os01g0253300","Os01g0253300","Os01g0117200","Os01g0117200","Os01g0253300","Os02g0208900","Os01g0194600","Os01g0194600","Os02g0208900","Os02g0208900","Os01g0194600","Os01g0253300","Os01g0253300",null,"WT","d1","WT","d1","WT","d1","WT","d1","WT","d1","WT","d1","WT","d1","WT","d1",null,"Os01g0120400","Os01g0565900","Os01g0810000","Os01g0810000","Os02g0535700","Os01g0265000",null,"Os01g0106900","Os01g0574600","Os01g0574600","Os01g0178500","Os01g0178500","Os01g0178500","Os01g0178500","Os01g0574600","Os01g0574600","Os01g0574600","Os01g0172400","Os01g0106900","Os01g0282800","Os01g0178500",null,"WT","RGA1","WT","RGA1","WT","RGA1","WT","RGA1","WT","RGA1","WT","RGA1","WT","RGA1",null,"Os01g0279100","Os01g0600900","Os01g0600900","Os01g0221900","Os01g0279100","Os01g0227100","Os01g0279100","Os01g0227100","Os01g0633100","Os01g0633100","Os01g0101200","Os01g0633100","Os01g0633100","Os01g0279100","Os01g0633100","Os01g0227100",null,"GO:0018130","P","heterocycle biosynthetic process",15,1833,57,23155,0.00019,0.16,"// Os01g0232700 // Os06g0132400 // Os01g0848200 // Os05g0455500 // Os01g0622300 // Os01g0221900 // Os03g0337600 // Os04g0550500 // Os02g0296800 // Os06g0704600 // Os03g0826500 // Os05g0349700 // Os04g0455800 // Os03g0679700 // Os08g0532200 ",null,null,"GO:0009117"," \"nucleotide metabolic process\"",3.93718831445193,-5.11350927482752,0.342914587669709,0," null",null,"GO:0030001"," \"metal ion transport\"",2.02285935540292,-4.08092190762393,0.924376897106885,0.30196255," \"lipid transport\""]
[null,"GO:0015979","P","photosynthesis",36,70,{"v":7.4e-16,"d":"7.40E-16"},{"v":1.2e-12,"d":"1.20E-12"},null,"GO:0008104","P","protein localization",31,293,{"v":3.3e-06,"d":"3.30E-06"},0.00079,null,"GO:0015979","photosynthesis","Biological process",52,3.2,{"v":6.51e-20,"d":"6.51E-20"},{"v":2.15e-17,"d":"2.15E-17"},null,"GO:0007166","cell surface receptor signaling pathway","Biological process",8,4,{"v":6.76e-05,"d":"6.76E-05"},{"v":0.00766,"d":"7.66E-03"},null,"GO:MF","sugar-phosphatase activity","GO:0050308",0.000568232755488987,3.24547373520636,11,739,6,18096,null,"GO:MF","structural molecule activity","GO:0005198",0.00196175638441756,2.70735492533129,468,726,40,18096,null,"Os01g0565900","Os01g0565900","Os01g0565900","Os01g0565900","Os01g0127700","Os01g0127700","Os01g0565900","Os02g0632500","Os01g0339900","Os01g0339900","Os02g0632500","Os02g0632500","Os01g0339900","Os01g0565900","Os01g0565900",null,"Os01g0235400","Os01g0253300","Os01g0730500","Os01g0239100","Os01g0103100","Os01g0142800","Os01g0103100","Os01g0142800","Os01g0103100","Os01g0142800","Os01g0235400","Os01g0253300","Os01g0235400","Os01g0253300","Os01g0235900","Os01g0194600",null,"Os01g0132800","Os02g0131600","Os03g0151700","Os03g0151700","Os02g0682600","Os01g0276100",null,"Os01g0107400","Os01g0633100","Os01g0633100","Os01g0231000","Os01g0192000","Os01g0231000","Os01g0231000","Os01g0738800","Os01g0738800","Os01g0633100","Os01g0574600","Os01g0118300","Os01g0718300","Os01g0231000",null,"Os01g0574600","Os01g0633100","Os01g0303100","Os01g0130400","Os01g0172400","Os01g0101200","Os01g0633100","Os01g0633100","Os01g0750300","Os01g0633100","Os01g0633100","Os01g0633100","Os01g0633100","Os01g0633100",null,"Os01g0600900","Os01g0720500","Os01g0720500","Os01g0232700","Os01g0622300","Os01g0279100","Os01g0622300","Os01g0279100","Os03g0735000","Os01g0750300","Os01g0221900","Os01g0750300","Os03g0735000","Os02g0744900","Os01g0750300","Os01g0279100",null,"GO:0042592","P","homeostatic process",23,1833,132,23155,9.5E-4,0.39,"// Os07g0186000 // Os02g0159700 // Os01g0616300 // Os12g0175500 // Os06g0220800 // Os10g0500700 // Os02g0817800 // Os01g0963400 // Os06g0196300 // Os04g0467800 // Os04g0244400 // Os01g0266600 // Os06g0224200 // Os01g0328700 // Os02g0192700 // Os02g0537700 // Os04g0608600 // Os04g0469800 // Os05g0480200 // Os10g0482900 // Os02g0819200 // Os09g0559600 // Os05g0200100 ",null,null,"GO:0034641"," \"cellular nitrogen compound metabolic process\"",26.2345354226932,-6.4089353929735,0.726938971482043,0.19888459," \"nucleotide metabolic process\"",null,"GO:0006810"," \"transport\"",18.081452126523,-2.79588001734407,0.928502516367734,0.49655092," \"lipid transport\""]
[null,"GO:0009765","P","photosynthesis, light harvesting",15,17,{"v":1.1e-09,"d":"1.10E-09"},{"v":9.1e-07,"d":"9.10E-07"},null,"GO:0033036","P","macromolecule localization",32,296,{"v":1.5E-6,"d":"1.50E-06"},0.00079,null,"GO:0009768",",","Biological process",14,0.86,{"v":2.88e-12,"d":"2.88E-12"},{"v":5.3e-10,"d":"5.30E-10"},null,"GO:0042026","protein refolding","Biological process",5,2.5,{"v":5.71E-4,"d":"5.71E-04"},0.04,null,"GO:MF","catalytic activity","GO:0003824",0.000686967121209689,3.1630640481208,9567,739,452,18096,null,"GO:MF","heat shock protein binding","GO:0031072",0.00261431562412262,2.58264198158329,54,726,11,18096,null,"Os01g0626300","Os01g0626300","Os01g0626300","Os01g0626300","Os01g0140500","Os01g0140500","Os01g0626300","Os03g0246800","Os02g0159700","Os02g0159700","Os03g0246800","Os03g0246800","Os02g0159700","Os01g0626300","Os01g0626300",null,"Os01g0321700","Os01g0565900","Os01g0928300","Os02g0102900","Os01g0142800","Os01g0172100","Os01g0142800","Os01g0172100","Os01g0142800","Os01g0172100","Os01g0321700","Os01g0565900","Os01g0321700","Os01g0565900","Os01g0339900","Os01g0339900",null,"Os01g0160800","Os02g0178400","Os03g0241200","Os03g0241200","Os03g0825400","Os01g0662600",null,"Os01g0113200","Os01g0738800","Os01g0738800","Os01g0286900","Os01g0231000","Os01g0286900","Os01g0286900","Os01g0801600","Os01g0801600","Os01g0738800","Os01g0633100","Os01g0134500","Os01g0760000","Os01g0286900",null,"Os01g0633100","Os01g0750300","Os01g0508000","Os01g0618900","Os01g0232700","Os01g0221900","Os01g0750300","Os01g0750300","Os02g0790500","Os01g0750300","Os01g0750300","Os01g0750300","Os01g0750300","Os01g0750300",null,"Os01g0720500","Os01g0869800","Os01g0869800","Os01g0279100","Os02g0296800","Os01g0622300","Os02g0296800","Os01g0622300","Os05g0405000","Os02g0143100","Os01g0232700","Os03g0735000","Os05g0405000","Os03g0563300","Os03g0735000","Os02g0744900",null,"GO:0005975","P","carbohydrate metabolic process",83,1833,713,23155,0.00075,0.39,"// Os06g0677400 // Os03g0792500 // Os07g0510200 // Os09g0491100 // Os07g0679300 // Os07g0197100 // Os03g0158300 // Os01g0633100 // Os06g0326400 // Os04g0477500 // Os02g0605900 // Os03g0161600 // Os09g0511900 // Os03g0828500 // Os09g0327400 // Os01g0905800 // Os07g0552800 // Os04g0604900 // Os01g0658700 // Os12g0274700 // Os03g0603600 // Os07g0176900 // Os08g0345800 // Os01g0739700 // Os01g0715400 // Os09g0533900 // Os05g0438600 // Os09g0433000 // Os08g0116900 // Os11g0701000 // Os02g0566800 // Os12g0297500 // Os10g0578200 // Os03g0243700 // Os03g0749300 // Os01g0875500 // Os07g0630800 // Os02g0143100 // Os06g0679500 // Os08g0562100 // Os08g0345700 // Os06g0683300 // Os12g0169600 // Os03g0735000 // Os04g0551200 // Os02g0781000 // Os07g0669100 // Os07g0424400 // Os01g0946600 // Os09g0511700 // Os03g0781400 // Os03g0266200 // Os01g0618900 // Os02g0562700 // Os04g0640700 // Os03g0412800 // Os04g0234600 // Os05g0533600 // Os06g0664200 // Os01g0127900 // Os04g0568600 // Os02g0177900 // Os03g0267300 // Os12g0170600 // Os01g0636500 // Os08g0160500 // Os11g0683500 // Os04g0513900 // Os10g0577500 // Os01g0130400 // Os09g0539200 // Os06g0156900 // Os05g0194900 // Os01g0930800 // Os03g0129300 // Os08g0509400 // Os02g0831500 // Os03g0808100 // Os03g0329500 // Os05g0129200 // Os03g0736300 // Os06g0133000 // Os11g0184300 ",null,null,"GO:0006414"," \"translational elongation\"",0.456556209988225,-4.53760200210104,0.65662541663182,0.22891011," \"nucleotide metabolic process\"",null,"GO:0006811"," \"ion transport\"",5.34306259876611,-2.30980391997149,0.939494542251149,0.60050121," \"lipid transport\""]
[null,"GO:0034641","P","cellular nitrogen compound metabolic process",52,252,{"v":3.7E-9,"d":"3.70E-09"},{"v":2.1e-06,"d":"2.10E-06"},null,"GO:0045184","P","establishment of protein localization",30,278,{"v":3.3e-06,"d":"3.30E-06"},0.00079,null,"GO:0009765","photosynthesis, light harvesting","Biological process",14,0.86,{"v":6.31e-11,"d":"6.31E-11"},{"v":9.5e-09,"d":"9.50E-09"},null,"GO:0006749","glutathione metabolic process","Biological process",5,2.5,{"v":0.00112,"d":"1.12E-03"},0.04,null,"GO:MF","chlorophyll binding","GO:0016168",0.00127411763410909,2.894790473503,18,739,7,18096,null,"GO:MF","carbohydrate derivative binding","GO:0097367",0.00801298205357481,2.09620582993363,2929,726,159,18096,null,"Os01g0833700","Os01g0833700","Os01g0833700","Os01g0833700","Os01g0239100","Os01g0239100","Os01g0833700","Os03g0819900","Os02g0819200","Os02g0819200","Os05g0534800","Os05g0534800","Os02g0749500","Os01g0833700","Os01g0833700",null,"Os01g0565900","Os01g0626300","Os02g0102900","Os02g0656500","Os01g0172100","Os01g0253300","Os01g0172100","Os01g0253300","Os01g0172100","Os01g0253300","Os01g0565900","Os01g0626300","Os01g0565900","Os01g0626300","Os02g0100100","Os02g0159700",null,"Os01g0191100","Os02g0496900","Os03g0333100","Os03g0333100","Os05g0176500","Os01g0830000",null,"Os01g0117000","Os01g0905800","Os01g0905800","Os01g0670800","Os01g0286900","Os01g0670800","Os01g0670800","Os01g0905800","Os01g0860700","Os01g0905800","Os01g0738800","Os01g0172400","Os01g0805900","Os01g0670800",null,"Os01g0738800","Os02g0143100","Os01g0518500","Os01g0633100","Os01g0279100","Os01g0227100","Os01g0860700","Os03g0239000","Os03g0432100","Os02g0143100","Os02g0280200","Os03g0239000","Os02g0280200","Os03g0239000",null,"Os01g0805300","Os02g0197600","Os02g0197600","Os01g0622300","Os02g0744900","Os02g0296800","Os02g0744900","Os02g0296800","Os08g0345800","Os03g0735000","Os01g0279100","Os03g0808100","Os08g0345800","Os05g0349700","Os03g0808100","Os03g0563300",null,"GO:0045454","P","cell redox homeostasis",20,1833,112,23155,1.5E-3,0.5,"// Os05g0480200 // Os02g0159700 // Os07g0186000 // Os02g0537700 // Os12g0175500 // Os04g0244400 // Os04g0608600 // Os01g0963400 // Os01g0266600 // Os06g0224200 // Os10g0500700 // Os01g0328700 // Os10g0482900 // Os01g0616300 // Os02g0819200 // Os06g0220800 // Os02g0192700 // Os09g0559600 // Os06g0196300 // Os05g0200100 ",null,null,"GO:0044106"," \"cellular amine metabolic process\"",0.47910163992985,-2.22914798835786,0.750949629593791,0.23019673," \"nucleotide metabolic process\"",null,"GO:0006826"," \"iron ion transport\"",0.276715633290601,-4.0087739243075,0.935733450046416,0.65478004," \"lipid transport\""]
[null,"GO:0019684","P","photosynthesis, light reaction",16,24,{"v":5.2e-09,"d":"5.20E-09"},{"v":2.2e-06,"d":"2.20E-06"},null,"GO:0015031","P","protein transport",30,278,{"v":3.3e-06,"d":"3.30E-06"},0.00079,null,"GO:0009416","response to light stimulus","Biological process",22,1.36,{"v":1.08e-08,"d":"1.08E-08"},{"v":1.27e-06,"d":"1.27E-06"},null,"GO:0051259","protein oligomerization","Biological process",3,1.5,{"v":1.4E-3,"d":"1.40E-03"},0.04,null,"GO:MF","carbohydrate phosphatase activity","GO:0019203",0.0026728915768153,2.57301865760928,27,739,8,18096,null,"GO:MF","purine nucleotide binding","GO:0017076",0.0106074352318663,1.9743896113199,2878,726,156,18096,null,"Os02g0126800","Os02g0126800","Os02g0126800","Os02g0126800","Os01g0293200","Os01g0293200","Os02g0126800","Os03g0823700","Os04g0244400","Os04g0244400","Os06g0622800","Os06g0622800","Os02g0817200","Os02g0126800","Os02g0126800",null,"Os01g0611100","Os01g0833700","Os02g0121300","Os03g0113700","Os01g0173900","Os01g0337500","Os01g0173900","Os01g0337500","Os01g0173900","Os01g0337500","Os01g0611100","Os01g0833700","Os01g0611100","Os01g0833700","Os02g0159700","Os02g0819200",null,"Os01g0220300","Os02g0682600","Os03g0343300","Os03g0343300","Os06g0168000","Os01g0926300",null,"Os01g0117400","Os02g0105400","Os02g0105400","Os01g0675700","Os01g0670800","Os01g0675700","Os01g0675700","Os01g0939600","Os01g0905800","Os02g0105400","Os01g0801600","Os01g0216000","Os02g0167300","Os01g0675700",null,"Os01g0750300","Os02g0562700","Os01g0574600","Os01g0636500","Os01g0286600","Os01g0232700","Os02g0280200","Os03g0329500","Os03g0735000","Os03g0735000","Os03g0432100","Os03g0735000","Os03g0432100","Os03g0735000",null,"Os01g0869800","Os02g0764500","Os02g0764500","Os01g0848200","Os03g0337600","Os02g0744900","Os03g0337600","Os02g0744900","Os08g0473900","Os03g0808100","Os01g0622300","Os05g0405000","Os10g0437600","Os06g0132400","Os05g0405000","Os05g0349700",null,"GO:0019725","P","cellular homeostasis",21,1833,125,23155,2.3E-3,0.56,"// Os05g0480200 // Os02g0159700 // Os07g0186000 // Os02g0537700 // Os12g0175500 // Os04g0244400 // Os04g0608600 // Os01g0963400 // Os01g0266600 // Os06g0224200 // Os10g0500700 // Os01g0328700 // Os04g0469800 // Os01g0616300 // Os02g0819200 // Os06g0220800 // Os02g0192700 // Os09g0559600 // Os06g0196300 // Os10g0482900 // Os05g0200100 ",null,null,"GO:0046483"," \"heterocycle metabolic process\"",21.7652043231961,-2.85387196432176,0.774764243865831,0.24214757," \"nucleotide metabolic process\"",null,"GO:0008152"," \"metabolic process\"",60.5596218240454,-11.8239087409443,1,0," null"]
[null,"GO:0005975","P","carbohydrate metabolic process",102,713,{"v":2E-8,"d":"2.00E-08"},{"v":6.9E-6,"d":"6.90E-06"},null,"GO:0006457","P","protein folding",21,159,{"v":6.2e-06,"d":"6.20E-06"},0.0012,null,"GO:0018298","protein-chromophore linkage","Biological process",14,0.86,{"v":1.57e-08,"d":"1.57E-08"},{"v":1.62e-06,"d":"1.62E-06"},null,"GO:0042908","xenobiotic transport","Biological process",4,2,{"v":1.9E-3,"d":"1.90E-03"},0.04,null,"GO:BP","photosynthesis","GO:0015979",{"v":1.79386767453851e-12,"d":"1.79E-12"},11.7462095960395,181,653,36,15812,null,"GO:MF","purine ribonucleotide binding","GO:0032555",0.0137161435668721,1.86276797777304,2870,726,155,18096,null,"Os02g0178400","Os02g0178400","Os02g0178400","Os02g0178400","Os01g0310800","Os01g0310800","Os02g0178400","Os03g0843100","Os04g0467800","Os04g0608600","Os07g0564700","Os07g0564700","Os02g0819200","Os02g0178400","Os02g0178400",null,"Os01g0626200","Os02g0126800","Os02g0128400","Os03g0143400","Os01g0209800","Os01g0356400","Os01g0209800","Os01g0356400","Os01g0209800","Os01g0356400","Os01g0626200","Os02g0126800","Os01g0626200","Os02g0126800","Os02g0745000","Os04g0244400",null,"Os01g0231700","Os03g0825400","Os03g0350300","Os03g0350300","Os07g0243100","Os02g0140300",null,"Os01g0117600","Os02g0601300","Os02g0601300","Os01g0718300","Os01g0675700","Os01g0718300","Os01g0753500","Os02g0105400","Os01g0937500","Os02g0601300","Os01g0905800","Os01g0216400","Os02g0269200","Os01g0753500",null,"Os01g0801600","Os02g0831500","Os01g0580200","Os01g0658700","Os01g0574600","Os01g0279100","Os03g0329500","Os03g0735000","Os03g0776000","Os03g0808100","Os03g0735000","Os03g0808100","Os03g0735000","Os03g0808100",null,"Os01g0938100","Os03g0592500","Os03g0592500","Os02g0296800","Os03g0563300","Os03g0337600","Os03g0563300","Os03g0337600","Os10g0437600","Os04g0682300","Os01g0848200","Os05g0533600","Os10g0539600","Os08g0532200","Os05g0533600","Os06g0132400",null,"GO:0065008","P","regulation of biological quality",28,1833,188,23155,0.0024,0.56,"// Os07g0186000 // Os02g0159700 // Os01g0616300 // Os02g0817200 // Os02g0749500 // Os12g0175500 // Os06g0220800 // Os10g0500700 // Os02g0817800 // Os01g0963400 // Os04g0514800 // Os06g0196300 // Os04g0467800 // Os05g0593800 // Os04g0244400 // Os01g0266600 // Os06g0224200 // Os01g0328700 // Os02g0192700 // Os11g0309000 // Os02g0537700 // Os04g0608600 // Os04g0469800 // Os05g0480200 // Os10g0482900 // Os02g0819200 // Os09g0559600 // Os05g0200100 ",null,null,"GO:0006769"," \"nicotinamide metabolic process\"",1.73133389200015E-4,-2.85387196432176,0.73696578440576,0.26994554," \"nucleotide metabolic process\"",null,"GO:0009607"," \"response to biotic stimulus\"",0.85178511085402,-5.92081875395237,0.962543921034319,0," null"]
[null,"GO:0044262","P","cellular carbohydrate metabolic process",47,274,{"v":2.2e-06,"d":"2.20E-06"},6.2E-4,null,"GO:0051179","P","localization",89,1361,{"v":8.1e-06,"d":"8.10E-06"},0.0013,null,"GO:0015995","chlorophyll biosynthetic process","Biological process",14,0.86,{"v":2.59e-07,"d":"2.59E-07"},{"v":2.53e-05,"d":"2.53E-05"},null,"GO:0030247","polysaccharide binding","Molecular function",9,4.5,{"v":7.27e-06,"d":"7.27E-06"},{"v":1.65E-3,"d":"1.65E-03"},null,"GO:BP","photosynthesis, light reaction","GO:0019684",2.76180667406265e-06,5.55880672522383,81,653,18,15812,null,"GO:MF","ribonucleotide binding","GO:0032553",0.0169772091598267,1.77013370078842,2904,726,156,18096,null,"Os02g0209000","Os02g0209000","Os02g0209000","Os02g0209000","Os01g0528000","Os01g0528000","Os02g0209000","Os04g0584800","Os04g0608600","Os05g0156300",null,null,"Os04g0244400","Os02g0209000","Os02g0209000",null,"Os01g0703600","Os02g0178400","Os02g0168700","Os03g0366000","Os01g0222500","Os01g0565900","Os01g0222500","Os01g0565900","Os01g0222500","Os01g0565900","Os01g0703600","Os02g0178400","Os01g0703600","Os02g0178400","Os02g0813500","Os04g0608600",null,"Os01g0372700","Os07g0243100","Os04g0592700","Os04g0592700","Os08g0535600","Os02g0244700",null,"Os01g0117700","Os03g0129300","Os03g0129300","Os01g0753500","Os01g0718300","Os01g0753500","Os01g0802700","Os03g0129300","Os01g0939600","Os03g0129300","Os01g0939600","Os01g0243000","Os02g0775400","Os01g0802700",null,"Os01g0905800","Os03g0129300","Os01g0618900","Os01g0715400","Os01g0711400","Os01g0622300","Os03g0432100","Os03g0736300","Os03g0837100","Os04g0682300","Os03g0837100","Os04g0604900","Os03g0837100","Os04g0604900",null,"Os02g0197600","Os04g0457000","Os04g0457000","Os02g0744900","Os05g0349700","Os03g0563300","Os05g0349700","Os03g0563300","Os10g0539600","Os05g0128900","Os01g0978100","Os07g0424400","Os11g0204600",null,"Os07g0424400","Os08g0532200",null,"GO:0006778","P","porphyrin metabolic process",8,1833,29,23155,0.0047,0.56,"// Os06g0132400 // Os01g0622300 // Os03g0337600 // Os02g0296800 // Os06g0704600 // Os03g0146400 // Os05g0349700 // Os08g0532200 ",null,null,"GO:0044249"," \"cellular biosynthetic process\"",21.4060598833074,-16.2839966563652,0.670994187540985,0.32537588," \"nucleotide metabolic process\"",null,"GO:0006979"," \"response to oxidative stress\"",0.552298974215833,-3.18708664335714,0.95901916154327,0.33336565," \"response to biotic stimulus\""]
[null,"GO:0018130","P","heterocycle biosynthetic process",18,57,{"v":4.1e-06,"d":"4.10E-06"},0.00098,null,"GO:0006810","P","transport",86,1332,{"v":1.8E-5,"d":"1.80E-05"},0.0025,null,"GO:0009735","response to cytokinin","Biological process",11,0.68,{"v":4.51E-6,"d":"4.51E-06"},{"v":0.000393,"d":"3.93E-04"},null,"GO:0102721","ubiquinol:oxygen oxidoreductase activity","Molecular function",2,1,{"v":0.00093,"d":"9.30E-04"},0.04,null,"GO:BP","chlorophyll biosynthetic process","GO:0015995",6.43232282049596e-05,4.19163216767349,28,653,10,15812,null,"GO:MF","adenyl nucleotide binding","GO:0030554",0.0318928096585436,1.49630721906211,2652,726,143,18096,null,"Os03g0114900","Os03g0114900","Os03g0114900","Os03g0227000","Os01g0690800","Os01g0690800","Os03g0227000","Os05g0534800","Os05g0156300","Os06g0220800",null,null,"Os04g0467800","Os03g0116000","Os03g0227000",null,"Os01g0938900","Os02g0209000","Os02g0332200","Os03g0628900","Os01g0224400","Os01g0626300","Os01g0224400","Os01g0626300","Os01g0224400","Os01g0626300","Os01g0973300","Os02g0209000","Os01g0973300","Os02g0209000","Os02g0819200","Os05g0156300",null,"Os01g0549700","Os08g0535600","Os04g0685100","Os04g0685100","Os12g0128600","Os02g0621700",null,"Os01g0118300","Os03g0412800","Os03g0412800","Os01g0802700","Os01g0753500","Os01g0802700","Os01g0856500","Os03g0416500","Os02g0105400","Os03g0320100","Os02g0105400","Os01g0290000","Os02g0810200","Os01g0856500",null,"Os01g0939600","Os03g0239000","Os01g0633100","Os01g0750300","Os01g0743400","Os01g0743400","Os03g0735000","Os03g0808100","Os04g0682300","Os05g0128900","Os04g0604300","Os04g0631200","Os04g0604300","Os04g0631200",null,"Os02g0578400","Os06g0320500","Os06g0320500","Os03g0337600","Os06g0132400","Os05g0349700","Os06g0132400","Os05g0349700","Os11g0204600","Os05g0405000","Os02g0296800","Os07g0552800",null,null,"Os07g0552800",null,null,"GO:0006779","P","porphyrin biosynthetic process",7,1833,23,23155,0.0051,0.56,"// Os06g0132400 // Os01g0622300 // Os03g0337600 // Os02g0296800 // Os06g0704600 // Os05g0349700 // Os08g0532200 ",null,null,"GO:0043603"," \"cellular amide metabolic process\"",6.72366287092487,-2.60205999132796,0.679354682574501,0.33266292," \"nucleotide metabolic process\"",null,"GO:0051707"," \"response to other organism\"",0.801327115905567,-3.95860731484178,0.962756489182648,0.34630026," \"response to biotic stimulus\""]
[null,"GO:0044042","P","glucan metabolic process",25,106,{"v":5.6e-06,"d":"5.60E-06"},0.0012,null,"GO:0051234","P","establishment of localization",86,1337,{"v":2.1e-05,"d":"2.10E-05"},0.0025,null,"GO:0010196","nonphotochemical quenching","Biological process",4,0.25,{"v":0.000516,"d":"5.16E-04"},0.04,null,"GO:0004364","glutathione transferase activity","Molecular function",5,2.5,{"v":1.32E-3,"d":"1.32E-03"},0.04,null,"GO:BP","chlorophyll metabolic process","GO:0015994",0.000520074486967421,3.28393445066861,42,653,11,15812,null,"GO:MF","misfolded protein binding","GO:0051787",0.0385138187545573,1.41438341771046,29,726,7,18096,null,"Os03g0116000","Os03g0213100","Os03g0213100","Os03g0711400","Os01g0694000","Os01g0694000","Os03g0711400","Os05g0564400","Os06g0220800","Os06g0224200",null,null,"Os04g0608600","Os03g0227000","Os03g0711400",null,"Os01g0973300","Os03g0114900","Os02g0462900","Os03g0648400","Os01g0225000","Os01g0695800","Os01g0225000","Os01g0695800","Os01g0225000","Os01g0695800","Os02g0126800","Os03g0116000","Os02g0126800","Os03g0116000","Os03g0767500","Os06g0220800",null,"Os01g0593500","Os12g0128600","Os05g0176000","Os05g0176000","Os12g0571200","Os02g0813500",null,"Os01g0134500","Os03g0416500","Os03g0416500","Os01g0856500","Os01g0802700","Os01g0856500","Os02g0141100","Os03g0776000","Os03g0129300","Os03g0412800","Os02g0601300","Os01g0329900","Os03g0114000","Os02g0141100",null,"Os02g0105400","Os03g0401300","Os01g0738800","Os01g0851700","Os01g0760600","Os01g0848200","Os03g0736300","Os04g0604900","Os05g0128900","Os05g0405000","Os04g0631200","Os05g0405000","Os04g0631200","Os05g0405000",null,"Os02g0744900","Os07g0558400","Os07g0558400","Os03g0563300","Os06g0704600","Os06g0132400","Os06g0704600","Os06g0132400",null,"Os05g0533600","Os02g0510200","Os08g0160500",null,null,"Os08g0160500",null,null,"GO:0009765","P","photosynthesis, light harvesting",6,1833,17,23155,5.3E-3,0.56,"// Os03g0592500 // Os01g0869800 // Os02g0197600 // Os02g0764500 // Os09g0439500 // Os06g0320500 ",null,null,"GO:0046164"," \"alcohol catabolic process\"",0.232154561578301,-1.92081875395238,0.602989460547252,0.34360657," \"nucleotide metabolic process\"",null,"GO:0006950"," \"response to stress\"",4.79462449912943,-5.92081875395237,0.955849341995804,0.42569326," \"response to biotic stimulus\""]
[null,"GO:0006073","P","cellular glucan metabolic process",21,90,{"v":3.5e-05,"d":"3.50E-05"},0.0065,null,"GO:0070727","P","cellular macromolecule localization",20,165,{"v":3.1e-05,"d":"3.10E-05"},0.0031,null,"GO:0009507","chloroplast","Cellular component",247,15.22,{"v":2.58e-42,"d":"2.58E-42"},{"v":4.27e-39,"d":"4.27E-39"},null,"GO:0051082","unfolded protein binding","Molecular function",8,4,{"v":1.47E-3,"d":"1.47E-03"},0.04,null,"GO:BP","photosynthesis, light harvesting in photosystem I","GO:0009768",0.000682620654596736,3.16582057506459,15,653,7,15812,null,"GO:MF","adenyl ribonucleotide binding","GO:0032559",0.0416492279160988,1.38039304503476,2645,726,142,18096,null,"Os03g0213100","Os03g0227000","Os03g0227000","Os03g0787000","Os01g0752300","Os01g0752300","Os03g0787000","Os06g0551400","Os06g0224200","Os07g0186000",null,null,"Os05g0156300","Os03g0711400","Os03g0787000",null,"Os02g0126800","Os03g0116000","Os02g0760300","Os04g0352400","Os01g0232000","Os01g0833700","Os01g0232000","Os01g0833700","Os01g0232000","Os01g0833700","Os02g0131600","Os03g0227000","Os02g0131600","Os03g0227000","Os03g0800700","Os06g0224200",null,"Os01g0693900","Os12g0571200","Os06g0644600","Os06g0644600",null,"Os03g0146400",null,"Os01g0147900","Os03g0735000","Os03g0735000","Os01g0869900","Os01g0856500","Os01g0869900","Os02g0723400","Os03g0781400","Os03g0329500","Os03g0416500","Os03g0129300","Os01g0330100","Os03g0301800","Os02g0723400",null,"Os02g0118400","Os03g0412800","Os01g0750300","Os01g0866400","Os01g0978100","Os01g0978100","Os03g0837100","Os04g0631200","Os05g0517200","Os05g0533600","Os06g0335900","Os05g0533600","Os06g0335900","Os05g0533600",null,"Os02g0764500","Os07g0562700","Os07g0562700","Os03g0679700","Os08g0532200","Os06g0704600","Os08g0532200","Os06g0704600",null,"Os07g0424400","Os02g0608600","Os08g0345800",null,null,"Os08g0345800",null,null,"GO:0032011","P","ARF protein signal transduction",7,1833,21,23155,0.0034,0.56,"// Os07g0564700 // Os02g0198300 // Os02g0632500 // Os06g0622800 // Os03g0246800 // Os05g0534800 // Os02g0208900 ",null,null,"GO:0042180"," \"cellular ketone metabolic process\"",0.464973955371129,-2.2518119729938,0.628291697676005,0.37133971," \"nucleotide metabolic process\"",null,"GO:0042221"," \"response to chemical\"",3.60288159057783,-3.63827216398241,0.957018406774,0.52220402," \"response to biotic stimulus\""]
[null,"GO:0044264","P","cellular polysaccharide metabolic process",21,94,{"v":6e-05,"d":"6.00E-05"},0.01,null,"GO:0034613","P","cellular protein localization",20,165,{"v":3.1e-05,"d":"3.10E-05"},0.0031,null,"GO:0009579","thylakoid","Cellular component",62,3.82,{"v":7.1e-30,"d":"7.10E-30"},5.88E-27,null,"GO:0015238","drug transmembrane transporter activity","Molecular function",4,2,{"v":1.9E-3,"d":"1.90E-03"},0.04,null,"GO:BP","fructose 1,6-bisphosphate metabolic process","GO:0030388",1.33978305257838E-3,2.87296552006502,11,653,6,15812,null,"GO:BP","protein folding","GO:0006457",{"v":1.43423827816409E-8,"d":"1.43E-08"},7.84337869086121,208,646,33,15812,null,"Os03g0227000","Os03g0296300","Os03g0296300","Os05g0383100","Os01g0883000","Os01g0883000","Os04g0612600","Os06g0622800","Os07g0186000","Os08g0250700",null,null,"Os05g0593800","Os03g0787000","Os04g0612600",null,"Os02g0131600","Os03g0213100","Os02g0774300","Os04g0402100","Os01g0235400","Os01g0869200","Os01g0235400","Os01g0869200","Os01g0235400","Os01g0869200","Os02g0178400","Os03g0711400","Os02g0178400","Os03g0711400","Os04g0244400","Os07g0186000",null,"Os01g0723200",null,"Os06g0704900","Os06g0704900",null,"Os03g0219500",null,"Os01g0170300","Os03g0776000","Os03g0776000","Os02g0141100","Os01g0869900","Os02g0141100","Os02g0817600","Os04g0677500","Os03g0416500","Os03g0735000","Os03g0320100","Os01g0649900","Os03g0602300","Os02g0817600",null,"Os02g0280200","Os03g0603600","Os01g0801500","Os01g0875500","Os02g0170100","Os02g0296800","Os04g0604300","Os05g0129200","Os05g0518600","Os07g0424400","Os06g0696400","Os07g0424400","Os06g0696400","Os07g0424400",null,"Os03g0343900","Os07g0577600","Os07g0577600","Os03g0826500",null,"Os08g0532200",null,"Os08g0532200",null,"Os07g0552800","Os02g0744900","Os09g0422500",null,null,"Os09g0422500",null,null,"GO:0044271","P","cellular nitrogen compound biosynthetic process",28,1833,201,23155,0.0054,0.56,"// Os01g0528300 // Os02g0510200 // Os11g0629500 // Os02g0296800 // Os08g0532200 // Os01g0848200 // Os01g0622300 // Os04g0405800 // Os04g0550500 // Os09g0565700 // Os03g0826500 // Os04g0177400 // Os01g0232700 // Os08g0424500 // Os01g0221900 // Os03g0337600 // Os04g0640600 // Os03g0679700 // Os06g0704600 // Os05g0455700 // Os05g0349700 // Os06g0564500 // Os03g0712800 // Os05g0455500 // Os01g0652600 // Os06g0132400 // Os12g0446900 // Os09g0436500 ",null,null,"GO:0044267"," \"cellular protein metabolic process\"",14.4410109784921,-16.9586073148418,0.654388314505842,0.37728887," \"nucleotide metabolic process\"",null,"GO:0006952"," \"defense response\"",1.03404955500044,-2.82390874094432,0.956869833242317,0.59199074," \"response to biotic stimulus\""]
[null,"GO:0006779","P","porphyrin biosynthetic process",10,23,{"v":6.8e-05,"d":"6.80E-05"},0.01,null,"GO:0006886","P","intracellular protein transport",19,159,{"v":5.9e-05,"d":"5.90E-05"},0.0052,null,"GO:0009535","chloroplast thylakoid membrane","Cellular component",85,5.24,{"v":3.15e-26,"d":"3.15E-26"},{"v":1.74e-23,"d":"1.74E-23"},null,"GO:0042910","xenobiotic transporter activity","Molecular function",4,2,{"v":1.9E-3,"d":"1.90E-03"},0.04,null,"GO:BP","carbohydrate metabolic process","GO:0005975",0.00174846423650769,2.75734324642377,962,653,70,15812,null,"GO:BP","intracellular transport","GO:0046907",{"v":4.44957549536963e-07,"d":"4.45E-07"},6.35168142021289,673,646,63,15812,null,"Os03g0296300","Os03g0711400","Os03g0711400","Os05g0461000","Os01g0911200","Os01g0911200","Os05g0383100","Os07g0239400","Os07g0246200","Os09g0559600",null,null,"Os06g0220800","Os04g0612600","Os05g0383100",null,"Os02g0178400","Os03g0227000","Os03g0113700","Os06g0687700","Os01g0279700","Os01g0919800","Os01g0279700","Os01g0919800","Os01g0279700","Os01g0919800","Os02g0209000","Os03g0787000","Os02g0209000","Os03g0787000","Os04g0508300","Os07g0246200",null,"Os01g0839300",null,"Os07g0301200","Os07g0301200",null,"Os03g0314700",null,"Os01g0171000","Os03g0781400","Os03g0781400","Os02g0723400","Os02g0141100","Os02g0723400","Os03g0633800","Os05g0187100","Os03g0736300","Os03g0776000","Os03g0412800","Os01g0651800","Os03g0661300","Os03g0633800",null,"Os02g0511600","Os03g0735000","Os01g0801600","Os01g0930800","Os02g0296800","Os02g0510200","Os04g0631200","Os05g0405000","Os07g0208500","Os07g0552800","Os06g0696500","Os07g0552800","Os06g0696500","Os07g0552800",null,"Os03g0563300","Os08g0435900","Os08g0276100","Os04g0455800",{"$nulls":5},"Os08g0160500","Os03g0118600","Os10g0437600",null,null,"Os10g0437600",null,null,"GO:0006006","P","glucose metabolic process",17,1833,100,23155,0.0051,0.56,"// Os06g0677400 // Os03g0412800 // Os08g0345800 // Os06g0326400 // Os03g0781400 // Os03g0266200 // Os05g0194900 // Os01g0905800 // Os03g0129300 // Os02g0562700 // Os12g0169600 // Os08g0345700 // Os01g0633100 // Os07g0630800 // Os07g0197100 // Os03g0735000 // Os07g0176900 ",null,null,"GO:0043648"," \"dicarboxylic acid metabolic process\"",1.04559755206008,-2.14874165128092,0.583967502310976,0.4099425," \"nucleotide metabolic process\"",null,"GO:0009987"," \"cellular process\"",77.5997354798827,-3.36653154442041,1,0," null"]
[null,"GO:0006778","P","porphyrin metabolic process",11,29,{"v":8e-05,"d":"8.00E-05"},0.011,null,"GO:0044267","P","cellular protein metabolic process",130,2313,{"v":7.6e-05,"d":"7.60E-05"},0.0061,null,"GO:0009536","plastid","Cellular component",110,6.78,{"v":7.25e-23,"d":"7.25E-23"},{"v":3e-20,"d":"3.00E-20"},{"$nulls":9},"GO:BP","photosynthesis, light harvesting","GO:0009765",0.00335390479874461,2.4744492690903,25,653,8,15812,null,"GO:BP","protein transport","GO:0015031",{"v":6.35852574748727e-07,"d":"6.36E-07"},6.19664356579011,679,646,63,15812,null,"Os03g0711400","Os03g0787000","Os03g0787000","Os05g0475300","Os01g0924800","Os01g0924800","Os05g0461000","Os07g0564700","Os08g0250700","Os10g0482900",null,null,"Os06g0224200","Os05g0383100","Os05g0461000",null,"Os02g0209000","Os03g0296300","Os03g0143400","Os06g0716700","Os01g0309800","Os01g0933200","Os01g0309800","Os01g0933200","Os01g0309800","Os01g0933200","Os02g0496900","Os05g0383100","Os02g0496900","Os05g0383100","Os04g0608600","Os08g0250700",null,"Os01g0939500",null,"Os07g0435400","Os07g0435400",null,"Os03g0321800",null,"Os01g0172400","Os04g0485300","Os04g0485300","Os02g0817600","Os02g0723400","Os02g0817600","Os04g0671900","Os05g0402700","Os03g0776000","Os03g0781400","Os03g0416500","Os01g0722100","Os03g0773600","Os04g0671900",null,"Os02g0601300","Os03g0781400","Os01g0860700","Os01g0946600","Os02g0608600","Os02g0562700","Os06g0335900","Os05g0533600","Os07g0424400","Os08g0160500","Os06g0696600","Os08g0160500","Os06g0696600","Os08g0160500",null,"Os03g0592500","Os09g0346500","Os08g0435900","Os04g0550500",{"$nulls":5},"Os08g0345800","Os03g0337600","Os10g0467800",null,null,"Os10g0467800",null,null,"GO:0032012","P","regulation of ARF protein signal transduction",7,1833,21,23155,0.0034,0.56,"// Os07g0564700 // Os02g0198300 // Os02g0632500 // Os06g0622800 // Os03g0246800 // Os05g0534800 // Os02g0208900 ",null,null,"GO:0019538"," \"protein metabolic process\"",18.3942903101363,-14.7212463990472,0.671357897648017,0.45720201," \"nucleotide metabolic process\"",null,"GO:0042592"," \"homeostatic process\"",0.8601647668913,-2.06048074738138,0.977431799418416,0," null"]
[null,"GO:0033014","P","tetrapyrrole biosynthetic process",10,25,1.2E-4,0.015,null,"GO:0016192","P","vesicle-mediated transport",19,174,0.00017,0.011,null,"GO:0009941","chloroplast envelope","Cellular component",63,3.88,{"v":2.78e-19,"d":"2.78E-19"},{"v":7.66e-17,"d":"7.66E-17"},{"$nulls":9},"GO:BP","porphyrin-containing compound biosynthetic process","GO:0006779",0.00337789078253609,2.47135439659707,41,653,10,15812,null,"GO:BP","establishment of protein localization","GO:0045184",{"v":8.52585995963289e-07,"d":"8.53E-07"},6.06926180507595,684,646,63,15812,null,"Os03g0787000","Os03g0819900","Os03g0819900","Os05g0564400","Os01g0925700","Os01g0925700","Os05g0475300","Os10g0377400","Os09g0559600","Os10g0500700",null,null,"Os07g0186000","Os05g0461000","Os05g0475300",null,"Os02g0496900","Os03g0711400","Os03g0366000","Os07g0246200","Os01g0321700","Os01g0952800","Os01g0321700","Os01g0952800","Os01g0321700","Os01g0952800","Os02g0682600","Os05g0461000","Os02g0682600","Os05g0461000","Os05g0156300","Os09g0559600",null,"Os01g0970400",null,"Os07g0639800","Os07g0639800",null,"Os04g0479200",null,"Os01g0178500","Os04g0677500","Os04g0677500","Os03g0633800","Os02g0817600","Os03g0633800","Os05g0178600","Os05g0524400","Os03g0781400","Os04g0485300","Os03g0603600","Os01g0757200","Os04g0304200","Os05g0178600",null,"Os02g0790500","Os03g0808100","Os01g0875500","Os02g0143100","Os02g0613900","Os02g0608600","Os06g0696400","Os07g0424400","Os07g0552800","Os08g0345800","Os07g0208500","Os08g0237000","Os07g0208500","Os08g0237000",null,"Os03g0731100","Os09g0439500","Os09g0346500","Os05g0349700",{"$nulls":5},"Os08g0414700","Os03g0563300","Os10g0539600",null,null,"Os10g0539600",null,null,"GO:0044262","P","cellular carbohydrate metabolic process",36,1833,274,23155,4.3E-3,0.56,"// Os06g0677400 // Os04g0604900 // Os08g0345700 // Os07g0552800 // Os06g0326400 // Os01g0905800 // Os03g0129300 // Os04g0477500 // Os03g0603600 // Os07g0176900 // Os08g0345800 // Os09g0433000 // Os08g0116900 // Os10g0578200 // Os07g0630800 // Os02g0143100 // Os12g0169600 // Os03g0735000 // Os07g0424400 // Os03g0781400 // Os03g0266200 // Os02g0562700 // Os02g0566800 // Os03g0412800 // Os05g0533600 // Os06g0679500 // Os01g0633100 // Os12g0170600 // Os08g0160500 // Os10g0577500 // Os06g0156900 // Os05g0194900 // Os02g0831500 // Os03g0808100 // Os07g0197100 // Os06g0133000 ",null,null,"GO:0044260"," \"cellular macromolecule metabolic process\"",22.8656055182736,-11.9586073148418,0.714148841943824,0.46451829," \"nucleotide metabolic process\"",null,"GO:0043086"," \"negative regulation of catalytic activity\"",0.573171935617787,-2.04095860767891,0.976957237149793,0.21415198," \"homeostatic process\""]
[null,"GO:0033013","P","tetrapyrrole metabolic process",11,31,0.00013,0.016,null,"GO:0046907","P","intracellular transport",20,189,0.00017,0.011,null,"GO:0009570","chloroplast stroma","Cellular component",78,4.81,1.16E-18,{"v":2.74e-16,"d":"2.74E-16"},{"$nulls":9},"GO:BP","disaccharide biosynthetic process","GO:0046351",0.00489692023949092,2.31007696966588,34,653,9,15812,null,"GO:BP","protein localization","GO:0008104",2.08098939371007e-06,5.68173013327464,766,646,67,15812,null,"Os03g0819900","Os03g0823700","Os03g0823700","Os06g0143900","Os01g0960400","Os01g0960400","Os05g0564400",null,"Os10g0482900",{"$nulls":3},"Os07g0246200","Os05g0475300","Os05g0564400",null,"Os02g0596100","Os03g0787000","Os03g0619400","Os07g0641700","Os01g0329400","Os02g0126800","Os01g0329400","Os02g0126800","Os01g0329400","Os02g0126800","Os02g0741500","Os05g0475300","Os02g0741500","Os05g0475300","Os05g0508500","Os10g0482900",null,"Os02g0102400",null,"Os07g0670600","Os07g0670600",null,"Os04g0662700",null,"Os01g0182700","Os05g0187100","Os04g0682300","Os04g0169100","Os03g0633800","Os04g0169100","Os05g0447200","Os06g0247500","Os04g0493600","Os04g0677500","Os03g0719300","Os01g0787600","Os04g0629700","Os05g0447200",null,"Os03g0129300","Os04g0249500","Os01g0905800","Os02g0177900","Os02g0623500","Os02g0623500","Os06g0696500","Os07g0552800","Os08g0160500","Os08g0414700","Os07g0424400","Os08g0345800","Os07g0424400","Os08g0345800",null,"Os03g0778100","Os11g0242800","Os09g0439500","Os05g0455500",{"$nulls":5},"Os09g0422500","Os03g0679700","Os11g0204600",null,null,"Os11g0204600",null,null,"GO:0007264","P","small GTPase mediated signal transduction",18,1833,104,23155,0.0034,0.56,"// Os03g0819900 // Os07g0564700 // Os10g0377400 // Os02g0198300 // Os02g0312600 // Os02g0632500 // Os04g0584800 // Os05g0513800 // Os07g0239400 // Os06g0622800 // Os06g0551400 // Os03g0246800 // Os01g0229400 // Os03g0843100 // Os05g0534800 // Os05g0564400 // Os03g0823700 // Os02g0208900 ",null,null,"GO:0055086"," \"nucleobase-containing small molecule metabolic process\"",4.85587216689283,-4.82390874094432,0.500286614824858,0.51050791," \"nucleotide metabolic process\"",null,"GO:0019725"," \"cellular homeostasis\"",0.558240912133178,-1.92081875395238,0.963666067017338,0.69276147," \"homeostatic process\""]
[null,"GO:0005982","P","starch metabolic process",8,16,0.00017,0.02,null,"GO:0007264","P","small GTPase mediated signal transduction",14,104,0.00018,0.011,null,"GO:0009534","chloroplast thylakoid","Cellular component",31,1.91,{"v":5.65e-14,"d":"5.65E-14"},{"v":1.17e-11,"d":"1.17E-11"},{"$nulls":9},"GO:BP","tetrapyrrole biosynthetic process","GO:0033014",5.36124527509104E-3,2.27073432349995,43,653,10,15812,null,"GO:BP","cellular localization","GO:0051641",2.61057186764396e-06,5.58326434639443,838,646,71,15812,null,"Os03g0823700","Os03g0843100","Os03g0843100","Os06g0168500","Os01g0962400","Os01g0962400","Os06g0143900",null,"Os10g0500700",{"$nulls":3},"Os08g0250700","Os05g0564400","Os06g0143900",null,"Os02g0672500","Os03g0819900","Os03g0804800","Os09g0482100","Os01g0356400","Os02g0159700","Os01g0356400","Os02g0159700","Os01g0356400","Os02g0159700","Os03g0116000","Os05g0564400","Os03g0116000","Os05g0564400","Os05g0552500","Os10g0500700",null,"Os02g0103700",null,"Os08g0130500","Os08g0130500",null,"Os04g0674200",null,"Os01g0186200","Os05g0402700","Os05g0187100","Os04g0671900","Os04g0169100","Os04g0671900","Os05g0523300","Os06g0326400","Os04g0677500","Os04g0682300","Os03g0735000","Os01g0827700","Os04g0665400","Os05g0523300",null,"Os03g0320100","Os04g0459500","Os01g0937500","Os02g0562700","Os02g0626100","Os02g0744900","Os06g0696600","Os08g0160500","Os08g0345800","Os09g0422500","Os07g0552800","Os08g0473900","Os07g0552800","Os08g0473900",null,"Os04g0457000",null,"Os11g0242800","Os06g0132400",{"$nulls":5},"Os10g0437600","Os03g0712800",{"$nulls":6},"GO:0033013","P","tetrapyrrole metabolic process",8,1833,31,23155,0.0065,0.63,"// Os06g0132400 // Os01g0622300 // Os03g0337600 // Os02g0296800 // Os06g0704600 // Os03g0146400 // Os05g0349700 // Os08g0532200 ",null,null,"GO:0006098"," \"pentose-phosphate shunt\"",0.201790427780402,-2.46852108295775,0.611559643631136,0.54472319," \"nucleotide metabolic process\"",null,"GO:0044262"," \"cellular carbohydrate metabolic process\"",1.55770880397481,-9.58502665202918,0.762670817884569,0," null"]
[null,"GO:0016051","P","carbohydrate biosynthetic process",20,97,0.00023,0.022,null,"GO:0042592","P","homeostatic process",16,132,0.00019,0.011,null,"GO:0009522","photosystem I","Cellular component",20,1.23,{"v":7.93e-12,"d":"7.93E-12"},{"v":1.31E-9,"d":"1.31E-09"},{"$nulls":9},"GO:BP","plastid organization","GO:0009657",0.00740632180341722,2.13039742185556,174,653,21,15812,null,"GO:BP","establishment of localization in cell","GO:0051649",3.13431902366186E-6,5.50385680136947,707,646,63,15812,null,"Os03g0843100","Os04g0612600","Os04g0612600","Os06g0731800","Os02g0102900","Os02g0102900","Os06g0168500",{"$nulls":5},"Os09g0559600","Os06g0143900","Os06g0168500",null,"Os02g0682600","Os03g0823700","Os03g0822800","Os09g0482600","Os01g0504500","Os02g0178400","Os01g0504500","Os02g0178400","Os01g0504500","Os02g0178400","Os03g0227000","Os06g0143900","Os03g0227000","Os06g0143900","Os06g0224200",null,null,"Os02g0105900",null,"Os09g0551300","Os09g0551300",null,"Os06g0146400",null,"Os01g0191800","Os05g0524400","Os05g0402700","Os05g0178600","Os04g0223300","Os05g0178600","Os06g0232300","Os06g0561000","Os05g0187100","Os05g0187100","Os03g0776000","Os01g0832100","Os06g0130200","Os06g0232300",null,"Os03g0401300","Os04g0477500","Os01g0939600","Os02g0698000","Os03g0106400","Os03g0106400","Os07g0208500","Os08g0237000","Os08g0414700","Os10g0437600","Os08g0160500","Os09g0422500","Os08g0160500","Os09g0422500",null,"Os05g0242400",null,null,"Os06g0704600",{"$nulls":5},"Os10g0467800","Os03g0826500",{"$nulls":6},"GO:0033014","P","tetrapyrrole biosynthetic process",7,1833,25,23155,0.0075,0.68,"// Os06g0132400 // Os01g0622300 // Os03g0337600 // Os02g0296800 // Os06g0704600 // Os05g0349700 // Os08g0532200 ",null,null,"GO:0009059"," \"macromolecule biosynthetic process\"",10.0325051012887,-12.5850266520292,0.691251168187055,0.5871341," \"nucleotide metabolic process\"",null,"GO:0005975"," \"carbohydrate metabolic process\"",5.82619132132875,-7.08092190762393,0.890919340173945,0.1045913," \"cellular carbohydrate metabolic process\""]
[null,"GO:0034637","P","cellular carbohydrate biosynthetic process",19,89,0.00022,0.022,null,"GO:0019725","P","cellular homeostasis",15,125,3.3E-4,0.019,null,"GO:0009523","photosystem II","Cellular component",27,1.66,{"v":1.33e-10,"d":"1.33E-10"},{"v":1.83e-08,"d":"1.83E-08"},{"$nulls":9},"GO:BP","fructose metabolic process","GO:0006000",0.00927232458418711,2.03281137399721,9,653,5,15812,null,"GO:BP","peptide transport","GO:0015833",4.5334366967006e-06,5.34357244422555,764,646,66,15812,null,"Os04g0612600","Os05g0383100","Os05g0383100","Os11g0174000","Os02g0105900","Os02g0105900","Os06g0731800",{"$nulls":5},"Os10g0482900","Os06g0168500","Os06g0698600",null,"Os02g0741500","Os03g0843100","Os03g0832200","Os10g0462900","Os01g0557500","Os02g0190300","Os01g0557500","Os02g0190300","Os01g0557500","Os02g0190300","Os03g0711400","Os06g0168500","Os03g0711400","Os06g0168500","Os06g0625500",null,null,"Os02g0146600",null,"Os11g0105400","Os11g0105400",null,"Os06g0152300",null,"Os01g0195200","Os06g0247500","Os05g0524400","Os05g0447200","Os04g0671900","Os05g0447200","Os06g0597000","Os08g0345700","Os05g0402700","Os05g0402700","Os03g0781400","Os01g0880800","Os06g0308300","Os06g0597000",null,"Os03g0412800","Os04g0604900","Os01g0946500","Os02g0781000","Os03g0118600","Os03g0118600","Os07g0424400","Os08g0345800","Os08g0445700","Os10g0467800","Os08g0237000","Os10g0437600","Os08g0237000","Os10g0437600",null,"Os05g0405000",null,null,"Os08g0532200",{"$nulls":5},"Os10g0539600","Os04g0177400",{"$nulls":6},"GO:0051186","P","cofactor metabolic process",21,1833,146,23155,0.011,0.94,"// Os02g0244700 // Os06g0677400 // Os06g0132400 // Os01g0622300 // Os05g0129000 // Os03g0337600 // Os03g0781400 // Os05g0349700 // Os05g0150800 // Os06g0694500 // Os02g0562700 // Os02g0296800 // Os06g0704600 // Os03g0314700 // Os09g0446800 // Os03g0146400 // Os08g0366000 // Os08g0532200 // Os01g0276100 // Os04g0455800 // Os07g0176900 ",null,null,"GO:0019752"," \"carboxylic acid metabolic process\"",8.63921761436941,-2.34678748622466,0.472806606437209,0.63301899," \"nucleotide metabolic process\"",null,"GO:0005984"," \"disaccharide metabolic process\"",0.136896570840452,-3.92081875395238,0.764954915179877,0.49781805," \"cellular carbohydrate metabolic process\""]
[null,"GO:0044271","P","cellular nitrogen compound biosynthetic process",32,201,2.9E-4,0.027,null,"GO:0045454","P","cell redox homeostasis",14,112,3.5E-4,0.019,null,"GO:0010287","plastoglobule","Cellular component",17,1.05,{"v":1.52E-8,"d":"1.52E-08"},{"v":1.62e-06,"d":"1.62E-06"},{"$nulls":9},"GO:BP","sucrose biosynthetic process","GO:0005986",0.00927232458418711,2.03281137399721,9,653,5,15812,null,"GO:BP","amide transport","GO:0042886",4.56016277377711e-06,5.34101965503479,781,646,67,15812,null,"Os05g0383100","Os05g0461000","Os05g0461000","Os12g0104800","Os02g0135300","Os02g0135300","Os11g0174000",{"$nulls":5},"Os10g0500700","Os06g0698600","Os06g0731800",null,"Os03g0114900","Os04g0612600","Os03g0859600","Os10g0488100","Os01g0565900","Os02g0209000","Os01g0565900","Os02g0209000","Os01g0565900","Os02g0209000","Os03g0783700","Os06g0731800","Os03g0783700","Os06g0731800","Os07g0186000",null,null,"Os02g0198900",null,"Os12g0105200","Os12g0105200",null,"Os06g0207000",null,"Os01g0216000","Os06g0326400","Os06g0172800","Os05g0523300","Os05g0178600","Os05g0523300","Os07g0182400","Os08g0473900","Os05g0524400","Os05g0524400","Os04g0485300","Os01g0919900","Os08g0117000","Os07g0182400",null,"Os03g0416500","Os04g0631200","Os01g0946600","Os02g0831500","Os03g0236200","Os03g0337600","Os07g0552800","Os08g0473900","Os09g0376800","Os10g0539600","Os08g0345800","Os10g0467800","Os08g0345800","Os10g0467800",null,"Os06g0107700",{"$nulls":8},"Os11g0204600","Os04g0550500",{"$nulls":18},"GO:0006082"," \"organic acid metabolic process\"",8.96817105384944,-2.32790214206428,0.485988051442376,0.65748781," \"nucleotide metabolic process\"",null,"GO:0009311"," \"oligosaccharide metabolic process\"",0.35944915465372,-3.65757731917779,0.804663317505397,0.54690407," \"cellular carbohydrate metabolic process\""]
[null,"GO:0009250","P","glucan biosynthetic process",15,63,0.00037,0.033,null,"GO:0032011","P","ARF protein signal transduction",6,21,0.00047,0.021,null,"GO:0031977","thylakoid lumen","Cellular component",10,0.62,{"v":8.34e-07,"d":"8.34E-07"},{"v":7.67e-05,"d":"7.67E-05"},{"$nulls":9},"GO:BP","cellular carbohydrate metabolic process","GO:0044262",0.0105392691173962,1.97718950575418,407,653,36,15812,null,"GO:BP","cellular macromolecule localization","GO:0070727",7.76214166577571e-06,5.11001843527505,641,646,58,15812,null,"Os05g0461000","Os05g0475300","Os05g0475300",null,"Os02g0146600","Os02g0146600","Os12g0104800",{"$nulls":6},"Os06g0731800","Os09g0439600",null,"Os03g0116000","Os05g0383100","Os04g0402100","Os11g0568500","Os01g0588200","Os02g0497700","Os01g0588200","Os02g0497700","Os01g0588200","Os02g0497700","Os03g0787000","Os11g0174000","Os03g0787000","Os11g0174000","Os07g0246200",null,null,"Os02g0220500",{"$nulls":4},"Os06g0670000",null,"Os01g0216400","Os07g0406300","Os06g0247500","Os06g0232300","Os05g0447200","Os06g0232300","Os08g0520500","Os10g0167300","Os06g0247500","Os06g0172800","Os04g0677500","Os02g0590000","Os08g0547500","Os08g0520500",null,"Os03g0432100","Os04g0682300","Os02g0105400","Os03g0124900","Os03g0245100","Os03g0391400","Os08g0160500","Os09g0422500","Os09g0422500","Os11g0204600","Os08g0473900","Os10g0539600","Os08g0473900","Os10g0539600",null,"Os06g0132400",{"$nulls":8},"Os12g0274700","Os04g0640600",{"$nulls":18},"GO:0006412"," \"translation\"",5.06183857202074,-33.3565473235138,0.552960824953109,0.67030152," \"nucleotide metabolic process\"",null,"GO:0019318"," \"hexose metabolic process\"",0.69546643641311,-3.16749108729376,0.695909920554793,0.58643862," \"cellular carbohydrate metabolic process\""]
[null,"GO:0019252","P","starch biosynthetic process",7,14,0.00045,0.038,null,"GO:0032012","P","regulation of ARF protein signal transduction",6,21,0.00047,0.021,null,"GO:0048046","apoplast","Cellular component",36,2.22,{"v":9.5e-06,"d":"9.50E-06"},{"v":0.000786,"d":"7.86E-04"},{"$nulls":9},"GO:BP","protein-chromophore linkage","GO:0018298",0.0140422618305726,1.85256293341551,22,653,7,15812,null,"GO:BP","cellular protein localization","GO:0034613",1.11134844452318e-05,4.95414975401314,631,646,57,15812,null,"Os05g0475300","Os05g0564400","Os05g0564400",null,"Os02g0182500","Os02g0182500",{"$nulls":7},"Os09g0439600","Os11g0174000",null,"Os03g0213100","Os05g0461000","Os04g0431100","Os12g0514500","Os01g0611100","Os02g0573500","Os01g0611100","Os02g0573500","Os01g0611100","Os02g0573500","Os03g0825400","Os12g0104800","Os03g0825400","Os12g0104800","Os07g0260300",null,null,"Os02g0321900",{"$nulls":4},"Os07g0134800",null,"Os01g0226500","Os08g0345700","Os06g0326400","Os06g0597000","Os05g0523300","Os06g0597000","Os10g0147400","Os10g0203000","Os06g0326400","Os06g0247500","Os04g0682300","Os02g0590400","Os09g0528000","Os10g0147400",null,"Os03g0603600","Os05g0128900","Os02g0118400","Os03g0129300","Os03g0279400","Os03g0563300","Os08g0237000","Os09g0533900","Os10g0204400",null,"Os09g0422500","Os10g0577500","Os09g0422500","Os10g0577500",null,"Os06g0320500",{"$nulls":9},"Os04g0659100",{"$nulls":6},"GO term","Ontology","Description","Number in input list","Number in BG/Ref","p-value","FDR",{"$nulls":5},"GO:0046496"," \"nicotinamide nucleotide metabolic process\"",0.352409551048847,-2.85387196432176,0.447209432286368,0.69793173," \"nucleotide metabolic process\"",null,"GO:0005996"," \"monosaccharide metabolic process\"",0.919923487507578,-2.34678748622466,0.694340908147818,0.60497201," \"cellular carbohydrate metabolic process\""]
[null,"GO:0015995","P","chlorophyll biosynthetic process",6,10,0.00057,0.046,null,"GO:0065008","P","regulation of biological quality",19,188,0.00042,0.021,null,"GO:0009505","plant-type cell wall","Cellular component",26,1.6,{"v":0.000423,"d":"4.23E-04"},0.03,{"$nulls":9},"GO:BP","porphyrin-containing compound metabolic process","GO:0006778",0.0151590905741366,1.81932685216577,58,653,11,15812,null,"GO:BP","intracellular protein transport","GO:0006886",1.48393143851654E-5,4.82858616412558,539,646,51,15812,null,"Os05g0564400","Os06g0143900","Os06g0143900",null,"Os02g0193000","Os02g0193000",{"$nulls":7},"Os11g0174000","Os12g0104800",null,"Os03g0225500","Os05g0475300","Os05g0147400","Os12g0562900","Os01g0626200","Os02g0574100","Os01g0626200","Os02g0574100","Os01g0695800","Os02g0574100","Os05g0353400",null,"Os05g0353400",null,"Os07g0509800",null,null,"Os02g0478700",{"$nulls":4},"Os08g0120000",null,"Os01g0228600","Os08g0345800","Os07g0406300","Os07g0182400","Os06g0232300","Os07g0182400","Os12g0601300","Os10g0442100","Os06g0561000","Os06g0326400","Os05g0187100","Os02g0639600","Os10g0465000","Os12g0601300",null,"Os03g0719300","Os05g0405000","Os02g0139300","Os03g0158300","Os03g0416500","Os03g0679700","Os08g0345800","Os10g0437600","Os10g0437600",null,"Os10g0437600","Os11g0204600","Os10g0437600","Os11g0204600",null,"Os07g0105600",{"$nulls":9},"Os05g0349700",{"$nulls":6},"GO:0034641","P","cellular nitrogen compound metabolic process",41,252,{"v":5.1E-5,"d":"5.10E-05"},0.084,{"$nulls":5},"GO:0009987"," \"cellular process\"",77.5997354798827,-11.4814860601221,1,0," null",null,"GO:0005976"," \"polysaccharide metabolic process\"",1.14422471855177,-3.25963731050576,0.771191792096725,0.62026325," \"cellular carbohydrate metabolic process\""]
[null,"GO:0033692","P","cellular polysaccharide biosynthetic process",15,67,0.00064,0.047,null,"GO:0051641","P","cellular localization",23,254,0.00047,0.021,null,"GO:0009654","photosystem II oxygen evolving complex","Cellular component",10,0.62,{"v":0.000452,"d":"4.52E-04"},0.03,{"$nulls":9},"GO:BP","tetrapyrrole metabolic process","GO:0033013",0.0179471840714694,1.74600368291616,59,653,11,15812,null,"GO:BP","nitrogen compound transport","GO:0071705",1.49720050145037E-5,4.82472003610136,980,646,77,15812,null,"Os06g0143900","Os06g0168500","Os06g0168500",null,"Os02g0220500","Os02g0220500",{"$nulls":7},"Os12g0104800",null,null,"Os03g0227000","Os05g0557400","Os05g0529700",null,"Os01g0695800","Os02g0658100","Os01g0695800","Os02g0658100","Os01g0696100","Os02g0658100","Os05g0383100",null,"Os05g0383100",null,"Os07g0524100",null,null,"Os02g0489400",{"$nulls":4},"Os08g0176100",null,"Os01g0229900","Os10g0167300","Os08g0345700","Os08g0130100","Os06g0597000","Os08g0130100","Os12g0601400","Os10g0571200","Os08g0345700","Os07g0406300","Os05g0402700","Os02g0644700","Os11g0648100","Os12g0601400",null,"Os03g0735000","Os05g0533600","Os02g0177900","Os03g0161600","Os03g0563300","Os03g0712800","Os08g0473900","Os10g0467800","Os10g0467800",null,"Os10g0467800",null,"Os10g0467800",null,null,"Os07g0148900",{"$nulls":9},"Os05g0455500",{"$nulls":6},"GO:0018130","P","heterocycle biosynthetic process",15,57,0.00019,0.16,{"$nulls":5},"GO:0006739"," \"NADP metabolic process\"",0.262688366097615,-2.46852108295775,0.921765466237872,0.04311154," null",null,"GO:0016051"," \"carbohydrate biosynthetic process\"",1.16452633976936,-3.56863623584101,0.727800305171574,0.62152952," \"cellular carbohydrate metabolic process\""]
[null,"GO:0015994","P","chlorophyll metabolic process",7,15,6.2E-4,0.047,null,"GO:0051649","P","establishment of localization in cell",22,243,6.2E-4,0.026,null,"GO:0016168","chlorophyll binding","Molecular function",14,0.86,{"v":7.01e-10,"d":"7.01E-10"},{"v":8.92e-08,"d":"8.92E-08"},{"$nulls":9},"GO:BP","cell wall biogenesis","GO:0042546",0.0186120558987737,1.73020565179251,157,653,19,15812,null,"GO:BP","cellular process","GO:0009987",1.58125473695944E-5,4.80099816046365,13135,646,585,15812,null,"Os06g0168500","Os06g0551400","Os06g0551400",null,"Os02g0321900","Os02g0321900",{"$nulls":10},"Os03g0296300","Os05g0564400","Os05g0540300",null,"Os01g0696100","Os02g0787600","Os01g0696100","Os02g0787600","Os01g0703600","Os02g0787600","Os05g0461000",null,"Os05g0461000",null,"Os07g0638400",null,null,"Os02g0532800",{"$nulls":4},"Os08g0366000",null,"Os01g0231000","Os10g0203000","Os08g0345800","Os08g0520500","Os07g0182400","Os08g0520500",null,"Os11g0148500","Os08g0473900","Os08g0345700","Os05g0524400","Os02g0668100","Os12g0547500",null,null,"Os03g0776000","Os06g0326400","Os02g0280200","Os03g0239000","Os03g0679700","Os03g0720300","Os09g0422500","Os10g0539600","Os10g0539600",null,"Os10g0539600",null,"Os10g0539600",null,null,"Os07g0544800",{"$nulls":9},"Os05g0455700",{"$nulls":6},"GO:0042592","P","homeostatic process",23,132,9.5E-4,0.39,{"$nulls":5},"GO:0009820"," \"alkaloid metabolic process\"",0.0142246392566733,-2.85387196432176,0.868983850086809,0.07520755," null",null,"GO:0034637"," \"cellular carbohydrate biosynthetic process\"",0.514725566091646,-3.49485002168009,0.705965410099469,0.69074029," \"cellular carbohydrate metabolic process\""]
[null,"GO:0000271","P","polysaccharide biosynthetic process",15,68,0.00073,0.051,null,"GO:0050789","P","regulation of biological process",96,1814,0.004,0.16,null,"GO:0008379","thioredoxin peroxidase activity","Molecular function",5,0.31,{"v":0.000556,"d":"5.56E-04"},0.04,{"$nulls":9},"GO:BP","plastid transcription","GO:0042793",0.0317250736925429,1.49859736043175,11,653,5,15812,null,"GO:BP","Golgi vesicle transport","GO:0048193",1.6836544501918E-5,4.77374703740521,181,646,26,15812,null,"Os06g0551400","Os06g0731800","Os06g0731800",null,"Os02g0519900","Os02g0519900",{"$nulls":10},"Os03g0711400","Os06g0143900","Os06g0116800",null,"Os01g0703600","Os02g0802500","Os01g0703600","Os02g0802500","Os01g0827500","Os02g0802500","Os05g0583400",null,"Os05g0583400",null,"Os08g0250700",null,null,"Os02g0534800",{"$nulls":4},"Os08g0540100",null,"Os01g0231800","Os10g0204400","Os10g0140200","Os10g0147400","Os08g0130100","Os10g0147400",null,"Os11g0484500","Os08g0522500","Os08g0345800","Os06g0172800","Os02g0669000",{"$nulls":3},"Os03g0781400","Os06g0561000","Os02g0511600","Os03g0243700","Os03g0712800","Os03g0738400","Os09g0533900","Os10g0577500",null,null,"Os10g0545500",null,"Os10g0545500",null,null,"Os07g0558400",{"$nulls":9},"Os05g0460600",{"$nulls":6},"GO:0005975","P","carbohydrate metabolic process",83,713,0.00075,0.39,{"$nulls":5},"GO:0009058"," \"biosynthetic process\"",23.0854399078764,-17.5528419686578,0.84792818760806,0.08416244," null",null,"GO:0050896"," \"response to stimulus\"",14.3743892503279,-6.13076828026902,1,0," null"]
[null,"GO:0016491","F","oxidoreductase activity",153,1387,{"v":1.7E-5,"d":"1.70E-05"},0.018,null,"GO:0051056","P","regulation of small GTPase mediated signal transduction",6,37,0.0057,0.2,null,"GO:0008725","DNA-3-methyladenine glycosylase activity","Molecular function",5,0.31,{"v":0.000556,"d":"5.56E-04"},0.04,{"$nulls":9},"GO:BP","plant-type cell wall biogenesis","GO:0009832",0.0385637715549097,1.41382049848844,99,653,14,15812,null,"GO:BP","vesicle-mediated transport","GO:0016192",1.7002683354895E-5,4.769482533077,432,646,44,15812,null,"Os06g0731800","Os07g0239400","Os07g0239400",null,"Os02g0540700","Os02g0540700",{"$nulls":10},"Os03g0783700","Os06g0168500","Os06g0130500",null,"Os01g0827500","Os02g0803600","Os01g0827500","Os02g0803600","Os01g0834200","Os02g0803600","Os06g0143900",null,"Os06g0143900",null,"Os09g0451500",null,null,"Os02g0686400",{"$nulls":4},"Os09g0297000",null,"Os01g0232700","Os10g0442100","Os10g0167300","Os10g0564500","Os08g0428400","Os10g0564500",null,null,"Os09g0533900","Os08g0566400","Os06g0247500","Os02g0745700",{"$nulls":3},"Os03g0837100","Os06g0677400","Os02g0601300","Os03g0267300","Os03g0720300","Os03g0781400","Os10g0437600","Os11g0204600",{"$nulls":7},"Os07g0562700",{"$nulls":9},"Os06g0132400",{"$nulls":6},"GO:0045454","P","cell redox homeostasis",20,112,1.5E-3,0.5,{"$nulls":5},"GO:0010467"," \"gene expression\"",11.4427977496953,-14.6777807052661,0.778917935760012,0.10887292," \"biosynthetic process\"",null,"GO:0051179"," \"localization\"",18.8716433028352,-3.01772876696043,1,0," null"]
[null,"GO:0003824","F","catalytic activity",684,7902,0.00016,0.087,null,"GO:0019538","P","protein metabolic process",142,2878,0.0059,0.2,{"$nulls":17},"GO:BP","disaccharide metabolic process","GO:0005984",0.0458428680487655,1.33872821960112,65,653,11,15812,null,"GO:BP","intra-Golgi vesicle-mediated transport","GO:0006891",6.09055274146717e-05,4.21534329165679,35,646,11,15812,null,"Os07g0239400","Os09g0347700","Os09g0347700",null,"Os02g0566800","Os02g0566800",{"$nulls":10},"Os03g0787000","Os06g0551400","Os06g0562600",null,"Os01g0834200","Os03g0114900","Os01g0834200","Os03g0114900","Os01g0847600","Os03g0114900","Os06g0168000",null,"Os06g0168000",null,"Os09g0521500",null,null,"Os02g0699600",{"$nulls":4},"Os09g0532000",null,"Os01g0243000","Os10g0571200","Os10g0203000","Os12g0601300","Os08g0520500","Os12g0601300",null,null,"Os10g0167300","Os10g0140200","Os06g0326400","Os02g0780700",{"$nulls":3},"Os04g0485300","Os06g0679500","Os02g0781000","Os03g0329500","Os03g0781400","Os03g0794500","Os10g0467800",{"$nulls":8},"Os07g0577600",{"$nulls":9},"Os06g0564500",{"$nulls":6},"GO:0019725","P","cellular homeostasis",21,125,2.3E-3,0.56,{"$nulls":5},"GO:0044237"," \"cellular metabolic process\"",49.9967675996236,-17.1487416512809,0.816288550133202,0.18322697," \"biosynthetic process\"",null,"GO:0006457"," \"protein folding\"",1.03808010030102,-2.45593195564972,0.984683434930694,0.01301491," null"]
[null,"GO:0016798","F","hydrolase activity, acting on glycosyl bonds",51,399,0.00075,0.26,null,"GO:0046578","P","regulation of Ras protein signal transduction",6,37,0.0057,0.2,{"$nulls":17},"GO:CC","plastid","GO:0009536",{"v":6.79512900399942e-48,"d":"6.80E-48"},47.1678022938699,1321,691,182,16500,null,"GO:BP","macromolecule localization","GO:0033036",1.5821708683616E-4,3.80074661617374,928,646,71,15812,null,"Os09g0347700","Os10g0377400","Os10g0377400",null,"Os02g0634900","Os02g0634900",{"$nulls":10},"Os03g0825400","Os06g0731800","Os06g0687700",null,"Os01g0847600","Os03g0116000","Os01g0847600","Os03g0137500","Os01g0847700","Os03g0137500","Os06g0669600",null,"Os06g0669600",null,"Os09g0559600",null,null,"Os02g0797200",{"$nulls":4},"Os10g0389100",null,"Os01g0261500","Os11g0148500","Os10g0204400","Os12g0601400","Os10g0147400","Os12g0601400",null,null,"Os10g0203000","Os10g0167300","Os06g0561000","Os02g0813600",{"$nulls":3},"Os04g0506800","Os07g0176900","Os02g0790500","Os03g0401300","Os03g0811100","Os03g0826500","Os10g0539600",{"$nulls":8},"Os08g0276100",{"$nulls":9},"Os06g0704600",{"$nulls":6},"GO:0065008","P","regulation of biological quality",28,188,0.0024,0.56,{"$nulls":5},"GO:0043170"," \"macromolecule metabolic process\"",33.2192280418472,-11.0757207139381,0.784087771307874,0.22037003," \"biosynthetic process\"",null,"GO:0044085"," \"cellular component biogenesis\"",4.91848412576312,-6.05060999335509,0.867026662053712,0.01583704," null"]
[null,"GO:0051920","F","peroxiredoxin activity",5,7,0.00096,0.26,null,"GO:0007265","P","Ras protein signal transduction",6,37,0.0057,0.2,{"$nulls":17},"GO:CC","chloroplast","GO:0009507",{"v":1.57079910570203e-46,"d":"1.57E-46"},45.803879354657,1295,691,178,16500,null,"GO:BP","response to heat","GO:0009408",2.58423292327512E-4,3.58766834488199,131,646,20,15812,null,"Os10g0377400","Os11g0174000","Os11g0174000",null,"Os02g0656500","Os02g0656500",{"$nulls":10},"Os03g0843100","Os07g0239400","Os06g0716700",null,"Os01g0847700","Os03g0137500","Os01g0847700","Os03g0156700","Os01g0869200","Os03g0156700","Os07g0201100",null,"Os07g0201100",null,"Os10g0485100",null,null,"Os02g0821200",{"$nulls":4},"Os10g0419600",null,"Os01g0266600","Os11g0484500","Os10g0442100",null,"Os10g0564500",{"$nulls":3},"Os10g0442100","Os10g0203000","Os07g0406300","Os02g0814200",{"$nulls":3},"Os04g0604300","Os07g0424400","Os03g0124900","Os03g0412800","Os04g0398300","Os04g0177400","Os10g0545500",{"$nulls":8},"Os08g0347500",{"$nulls":9},"Os08g0424500",{"$nulls":6},"GO:0006778","P","porphyrin metabolic process",8,29,0.0047,0.56,{"$nulls":5},"GO:0044238"," \"primary metabolic process\"",48.857269422597,-11.8239087409443,0.817396344981809,0.28068529," \"biosynthetic process\"",null,"GO:0031497"," \"chromatin assembly\"",0.148119077128397,-2.92081875395238,0.867198938303598,0.4514774," \"cellular component biogenesis\""]
[null,"GO:0009536","C","plastid",593,4949,{"v":5.3e-29,"d":"5.30E-29"},{"v":2e-26,"d":"2.00E-26"},null,"GO:0065007","P","biological regulation",100,1936,0.0064,0.21,{"$nulls":17},"GO:CC","thylakoid","GO:0009579",{"v":8.06222570765615e-34,"d":"8.06E-34"},33.0935450476345,341,691,78,16500,null,"GO:BP","endoplasmic reticulum to Golgi vesicle-mediated transport","GO:0006888",0.000260941514259385,3.58345682170656,108,646,18,15812,null,"Os11g0174000","Os12g0104800","Os12g0104800",null,"Os03g0113700","Os03g0113700",{"$nulls":10},"Os03g0849600","Os09g0347700","Os07g0246200",null,"Os01g0869200","Os03g0156700","Os01g0869200","Os03g0172000","Os01g0870100","Os03g0172000","Os07g0243100",null,"Os07g0243100",null,"Os10g0500700",null,null,"Os03g0109500",{"$nulls":4},"Os11g0642800",null,"Os01g0273100",null,"Os10g0571200",null,"Os12g0601300",{"$nulls":3},"Os10g0571200","Os10g0204400","Os08g0345700","Os02g0822500",{"$nulls":3},"Os04g0631200","Os07g0552800","Os03g0129300","Os03g0603600","Os04g0518100","Os04g0550500",{"$nulls":9},"Os08g0435900",{"$nulls":9},"Os08g0532200",{"$nulls":6},"GO:0006779","P","porphyrin biosynthetic process",7,23,0.0051,0.56,{"$nulls":5},"GO:0044262"," \"cellular carbohydrate metabolic process\"",1.55770880397481,-2.82390874094432,0.770313536726492,0.09904974," null",null,"GO:0042254"," \"ribosome biogenesis\"",1.63408832995429,-5.61978875828839,0.856596187437537,0.60357941," \"cellular component biogenesis\""]
[null,"GO:0009507","C","chloroplast",67,257,{"v":2e-15,"d":"2.00E-15"},{"v":3.6e-13,"d":"3.60E-13"},null,"GO:0050794","P","regulation of cellular process",89,1699,0.0071,0.23,{"$nulls":17},"GO:CC","plastid thylakoid","GO:0031976",{"v":2.45801021275704e-27,"d":"2.46E-27"},26.6094163170009,254,691,61,16500,null,"GO:BP","transport","GO:0006810",6.4700238457313E-4,3.18909411870526,2455,646,146,15812,null,"Os12g0104800",{"$nulls":3},"Os03g0139100","Os03g0139100",{"$nulls":10},"Os04g0421900","Os10g0377400","Os07g0641700",null,"Os01g0870100","Os03g0172000","Os01g0870100","Os03g0188100","Os01g0871500","Os03g0188100","Os08g0395300",null,"Os08g0395300",null,"Os11g0199200",null,null,"Os03g0141000",{"$nulls":4},"Os12g0176200",null,"Os01g0279100",null,"Os11g0148500",null,"Os12g0601400",{"$nulls":3},"Os11g0148500","Os10g0442100","Os08g0345800","Os03g0101900",{"$nulls":3},"Os04g0677500","Os07g0630800","Os03g0161600","Os03g0735000","Os04g0559400","Os04g0623800",{"$nulls":9},"Os09g0346500",{"$nulls":9},"Os09g0436500",{"$nulls":6},"GO:0009765","P","photosynthesis, light harvesting",6,17,5.3E-3,0.56,{"$nulls":5},"GO:0044275"," \"cellular carbohydrate catabolic process\"",0.283402044781505,-2.61978875828839,0.747806257126721,0.53394014," \"cellular carbohydrate metabolic process\"",null,"GO:0043933"," \"protein-containing complex organization\"",1.70733414158925,-2.63827216398241,0.875108977532547,0.60731625," \"cellular component biogenesis\""]
[null,"GO:0005737","C","cytoplasm",1274,14583,{"v":1.5e-13,"d":"1.50E-13"},{"v":1.9e-11,"d":"1.90E-11"},null,"GO:0000160","P","two-component signal transduction system (phosphorelay)",7,56,0.01,0.28,{"$nulls":17},"GO:CC","chloroplast thylakoid","GO:0009534",{"v":2.45801021275704e-27,"d":"2.46E-27"},26.6094163170009,254,691,61,16500,null,"GO:BP","localization","GO:0051179",0.0013657005922698,2.86464450224865,2614,646,152,15812,{"$nulls":5},"Os03g0143400","Os03g0143400",{"$nulls":10},"Os04g0566700","Os11g0174000","Os08g0500700",null,"Os01g0871500","Os03g0188100","Os01g0871500","Os03g0213100","Os01g0919800","Os03g0213100","Os08g0451000",null,"Os08g0451000",null,"Os12g0281300",null,null,"Os03g0182700",{"$nulls":4},"Os12g0270100",null,"Os01g0281600",null,"Os11g0484500",{"$nulls":5},"Os11g0484500","Os10g0571200","Os08g0566400","Os03g0118800",{"$nulls":3},"Os04g0682300","Os08g0116900","Os03g0165400","Os03g0736300","Os04g0610800","Os04g0640600",{"$nulls":9},"Os09g0439500",{"$nulls":9},"Os12g0446900",{"$nulls":6},"GO:0032011","P","ARF protein signal transduction",7,21,0.0034,0.56,{"$nulls":5},"GO:0044248"," \"cellular catabolic process\"",4.2591852543539,-2.05060999335509,0.752803243358479,0.57954002," \"cellular carbohydrate metabolic process\"",null,"GO:0051276"," \"chromosome organization\"",2.00470112554363,-2.82390874094432,0.866474992319298,0.6214038," \"cellular component biogenesis\""]
[null,"GO:0044444","C","cytoplasmic part",1254,14318,{"v":2e-13,"d":"2.00E-13"},{"v":1.9e-11,"d":"1.90E-11"},null,"GO:0009101","P","glycoprotein biosynthetic process",6,43,0.011,0.28,{"$nulls":17},"GO:CC","photosynthetic membrane","GO:0034357",{"v":1.5406308529668e-26,"d":"1.54E-26"},25.8123014091237,271,691,62,16500,null,"GO:BP","establishment of localization","GO:0051234",0.00137047747237427,2.86312809890883,2487,646,146,15812,{"$nulls":5},"Os03g0182700","Os03g0182700",{"$nulls":10},"Os04g0612600","Os12g0104800","Os08g0525600",null,"Os01g0919800","Os03g0213100","Os01g0919800","Os03g0218400","Os01g0933200","Os03g0218400","Os08g0535600",null,"Os08g0535600",null,"Os12g0626500",null,null,"Os03g0200500",{"$nulls":4},"Os12g0507000",null,"Os01g0286600",null,"Os11g0525600",{"$nulls":5},"Os11g0701100","Os11g0131900","Os09g0543100","Os03g0122300",{"$nulls":3},"Os05g0128900","Os08g0160500","Os03g0221500","Os03g0749300","Os04g0640600","Os04g0659100",{"$nulls":9},"Os09g0481200",{"$nulls":16},"GO:0044271","P","cellular nitrogen compound biosynthetic process",28,201,0.0054,0.56,{"$nulls":5},"GO:0019320"," \"hexose catabolic process\"",0.0587060696099412,-2.38721614328026,0.588579935549387,0.63336041," \"cellular carbohydrate metabolic process\"",null,"GO:0065003"," \"protein-containing complex assembly\"",1.4454318010786,-2.76955107862173,0.844540519716042,0.68592243," \"cellular component biogenesis\""]
[null,"GO:0044424","C","intracellular part",1365,16030,{"v":1.5E-11,"d":"1.50E-11"},{"v":6.2e-10,"d":"6.20E-10"},null,"GO:0044260","P","cellular macromolecule metabolic process",211,4546,0.011,0.28,{"$nulls":17},"GO:CC","thylakoid membrane","GO:0042651",{"v":3.71701804818019E-26,"d":"3.72E-26"},25.429805330159,248,691,59,16500,null,"GO:BP","'de novo' protein folding","GO:0006458",0.00159817532243887,2.79637557959575,66,646,13,15812,{"$nulls":5},"Os03g0234200","Os03g0234200",{"$nulls":10},"Os05g0304400",null,"Os08g0557500",null,"Os01g0933200","Os03g0218400","Os01g0933200","Os03g0227000","Os01g0938900","Os03g0227000","Os09g0266400",null,"Os09g0266400",{"$nulls":4},"Os03g0296400",{"$nulls":4},"Os12g0528400",null,"Os01g0286900",{"$nulls":7},"Os11g0701200","Os11g0148500","Os10g0140200","Os03g0162800",{"$nulls":3},"Os05g0187100","Os08g0237000","Os03g0320100","Os03g0749500","Os05g0349700","Os05g0349700",{"$nulls":9},"Os11g0242800",{"$nulls":16},"GO:0006006","P","glucose metabolic process",17,100,0.0051,0.56,{"$nulls":13},"GO:0046148"," \"pigment biosynthetic process\"",0.491335245210724,-2.50863830616573,0.945847159078392,0.04174196," null"]
[null,"GO:0043231","C","intracellular membrane-bounded organelle",1311,15273,{"v":1.4E-11,"d":"1.40E-11"},{"v":6.2e-10,"d":"6.20E-10"},null,"GO:0043413","P","macromolecule glycosylation",6,43,0.011,0.28,{"$nulls":17},"GO:CC","plastid thylakoid membrane","GO:0055035",{"v":1.11971342730641E-23,"d":"1.12E-23"},22.9508931138159,211,691,52,16500,null,"GO:BP","organic substance transport","GO:0071702",2.76070511323739E-3,2.55897998037028,1213,646,82,15812,{"$nulls":5},"Os03g0262200","Os03g0262200",{"$nulls":10},"Os05g0353400",null,"Os08g0559400",null,"Os01g0938900","Os03g0227000","Os01g0938900","Os03g0237100","Os01g0945300","Os03g0237100","Os10g0521300",null,"Os10g0521300",{"$nulls":4},"Os03g0333300",{"$nulls":4},"Os12g0596000",null,"Os01g0290000",{"$nulls":7},"Os11g0702200","Os11g0484500","Os10g0167300","Os03g0348800",{"$nulls":3},"Os05g0402700","Os08g0345800","Os03g0329500","Os03g0781400","Os05g0430800","Os05g0455500",{"$nulls":9},"Os12g0274700",{"$nulls":16},"GO:0032012","P","regulation of ARF protein signal transduction",7,21,0.0034,0.56,{"$nulls":13},"GO:0042440"," \"pigment metabolic process\"",0.527731346288351,-3.10790539730952,0.945427675099385,0.04205908," null"]
[null,"GO:0043229","C","intracellular organelle",1337,15631,{"v":1.3E-11,"d":"1.30E-11"},{"v":6.2e-10,"d":"6.20E-10"},null,"GO:0009100","P","glycoprotein metabolic process",6,43,0.011,0.28,{"$nulls":17},"GO:CC","chloroplast thylakoid membrane","GO:0009535",{"v":1.11971342730641E-23,"d":"1.12E-23"},22.9508931138159,211,691,52,16500,null,"GO:BP","protein refolding","GO:0042026",0.0118755493291848,1.92534629200912,57,646,11,15812,{"$nulls":5},"Os03g0281500","Os03g0281500",{"$nulls":10},"Os05g0383100",null,"Os09g0528300",null,"Os01g0945300","Os03g0237100","Os01g0945300","Os03g0244700","Os01g0952800","Os03g0244700","Os11g0104900",null,"Os11g0104900",{"$nulls":4},"Os03g0337800",{"$nulls":4},"Os12g0632700",null,"Os01g0290600",{"$nulls":8},"Os11g0525600","Os10g0203000","Os03g0352800",{"$nulls":3},"Os05g0517200","Os08g0414700","Os03g0401300","Os03g0808100","Os05g0455500","Os05g0455700",{"$nulls":9},"Os12g0420400",{"$nulls":16},"GO:0044262","P","cellular carbohydrate metabolic process",36,274,4.3E-3,0.56,{"$nulls":13},"GO:0016137"," \"glycoside metabolic process\"",0.0548902097119729,-3.92081875395238,0.90190640686279,0.04896846," null"]
[null,"GO:0043227","C","membrane-bounded organelle",1311,15274,{"v":1.5E-11,"d":"1.50E-11"},{"v":6.2e-10,"d":"6.20E-10"},null,"GO:0006486","P","protein amino acid glycosylation",6,43,0.011,0.28,{"$nulls":17},"GO:CC","chloroplast stroma","GO:0009570",{"v":7.5529483500943e-22,"d":"7.55E-22"},21.1218834851619,337,691,63,16500,null,"GO:BP","cellular response to heat","GO:0034605",0.0141211285140432,1.85013059451386,58,646,11,15812,{"$nulls":5},"Os03g0297700","Os03g0297700",{"$nulls":10},"Os05g0461000",null,"Os09g0571400",null,"Os01g0952800","Os03g0244700","Os01g0952800","Os03g0267700","Os01g0968000","Os03g0267700","Os12g0128600",null,"Os12g0128600",{"$nulls":4},"Os03g0385900",{"$nulls":6},"Os01g0293900",{"$nulls":9},"Os10g0204400","Os03g0365200",{"$nulls":3},"Os05g0518600","Os08g0473900","Os03g0412800","Os03g0828500","Os05g0455700","Os05g0460600",{"$nulls":26},"GO:0007264","P","small GTPase mediated signal transduction",18,104,0.0034,0.56,{"$nulls":13},"GO:0016138"," \"glycoside biosynthetic process\"",0.0301252097208027,-2.3767507096021,0.854499666901005,0.67193424," \"glycoside metabolic process\""]
[null,"GO:0043226","C","organelle",1337,15631,{"v":1.3E-11,"d":"1.30E-11"},{"v":6.2e-10,"d":"6.20E-10"},null,"GO:0070085","P","glycosylation",6,43,0.011,0.28,{"$nulls":17},"GO:CC","plastid stroma","GO:0009532",{"v":2.04168464224902e-21,"d":"2.04E-21"},20.6900113380119,343,691,63,16500,null,"GO:BP","establishment of protein localization to organelle","GO:0072594",0.0278736314260289,1.554806446947,236,646,24,15812,{"$nulls":5},"Os03g0366000","Os03g0366000",{"$nulls":10},"Os05g0529300",null,"Os10g0488100",null,"Os01g0968000","Os03g0267700","Os01g0968000","Os03g0280000","Os01g0973300","Os03g0280000","Os12g0207300",null,"Os12g0207300",{"$nulls":4},"Os03g0424500",{"$nulls":6},"Os01g0296100",{"$nulls":9},"Os10g0442100","Os03g0365800",{"$nulls":3},"Os05g0524400","Os08g0566400","Os03g0416500","Os04g0234600","Os05g0517500","Os05g0517500",{"$nulls":26},"GO:0033013","P","tetrapyrrole metabolic process",8,31,0.0065,0.63,{"$nulls":13},"GO:0006213"," \"pyrimidine nucleoside metabolic process\"",0.0493707172642764,-1.92081875395238,0.765853700215987,0.69388575," \"glycoside metabolic process\""]
[null,"GO:0044464","C","cell part",1525,18466,{"v":4.6e-10,"d":"4.60E-10"},{"v":1.6e-08,"d":"1.60E-08"},null,"GO:0007242","P","intracellular signaling cascade",19,262,0.013,0.32,{"$nulls":17},"GO:CC","organelle subcompartment","GO:0031984",{"v":2.52498205163377e-19,"d":"2.52E-19"},18.597741704636,443,691,69,16500,null,"GO:BP","chaperone cofactor-dependent protein refolding","GO:0051085",0.0417696809316279,1.37913884219148,54,646,10,15812,{"$nulls":5},"Os03g0628900","Os03g0628900",{"$nulls":10},"Os05g0583400",null,"Os12g0145500",null,"Os01g0973300","Os03g0280000","Os01g0973300","Os03g0296300","Os01g0975900","Os03g0296300","Os12g0528300",null,"Os12g0528300",{"$nulls":4},"Os03g0424800",{"$nulls":6},"Os01g0303100",{"$nulls":9},"Os10g0571200","Os03g0415200",{"$nulls":3},"Os06g0172800","Os09g0422500","Os03g0432100","Os04g0249500","Os05g0555600","Os06g0132400",{"$nulls":26},"GO:0033014","P","tetrapyrrole biosynthetic process",7,25,0.0075,0.68,{"$nulls":13},"GO:0009765"," \"photosynthesis"," light harvesting\"",0.0261535297725543,-2.92081875395238,0.911440640135875,0.05585871]
[null,"GO:0005623","C","cell",1525,18467,{"v":4.7e-10,"d":"4.70E-10"},{"v":1.6e-08,"d":"1.60E-08"},null,"GO:0009966","P","regulation of signal transduction",6,47,0.016,0.37,{"$nulls":17},"GO:CC","plastid envelope","GO:0009526",{"v":8.82236107063939e-13,"d":"8.82E-13"},12.0544151719285,290,691,46,16500,null,"GO:BP","'de novo' posttranslational protein folding","GO:0051084",0.0417696809316279,1.37913884219148,54,646,10,15812,{"$nulls":5},"Os03g0648400","Os03g0648400",{"$nulls":10},"Os06g0143900",null,"Os12g0168400",null,"Os01g0975900","Os03g0296300","Os01g0975900","Os03g0296800","Os01g0978000","Os03g0296800","Os12g0571200",null,"Os12g0571200",{"$nulls":4},"Os03g0577000",{"$nulls":6},"Os01g0310500",{"$nulls":9},"Os11g0131900","Os03g0432100",{"$nulls":3},"Os06g0247500","Os09g0433000","Os03g0603600","Os04g0382300","Os05g0573700","Os06g0564500",{"$nulls":26},"GO:0051186","P","cofactor metabolic process",21,146,0.011,0.94,{"$nulls":13},"GO:0022900"," \"electron transport chain\"",1.62871426955352,-2.76955107862173,0.883930984475892,0.54019687," \"photosynthesis"]
[null,"GO:0005622","C","intracellular",1375,16347,{"v":1.1e-09,"d":"1.10E-09"},{"v":3.3e-08,"d":"3.30E-08"},null,"GO:0010646","P","regulation of cell communication",6,47,0.016,0.37,{"$nulls":17},"GO:CC","chloroplast envelope","GO:0009941",{"v":7.33550671553027e-12,"d":"7.34E-12"},11.1345698809811,283,691,44,16500,null,"GO:BP","protein transmembrane transport","GO:0071806",0.0493960705429761,1.30630759782489,102,646,14,15812,{"$nulls":5},"Os03g0687700","Os03g0687700",{"$nulls":10},"Os06g0168000",null,"Os12g0258200",null,"Os01g0978000","Os03g0296800","Os01g0978000","Os03g0570800","Os02g0122200","Os03g0570800",{"$nulls":7},"Os03g0758800",{"$nulls":6},"Os01g0323100",{"$nulls":9},"Os11g0148500","Os03g0581400",{"$nulls":3},"Os06g0326400","Os10g0437600","Os03g0712700","Os04g0459500","Os06g0103600","Os06g0604200",{"$nulls":46},"GO:0015979"," \"photosynthesis\"",0.217587118211011,-5.38721614328026,0.922369960524651,0.06735695," null"]
[null,"GO:0009579","C","thylakoid",26,72,{"v":3.3e-09,"d":"3.30E-09"},{"v":9.4e-08,"d":"9.40E-08"},null,"GO:0032501","P","multicellular organismal process",18,248,0.015,0.37,{"$nulls":17},"GO:CC","photosystem I","GO:0009522",{"v":1.25615242997908E-7,"d":"1.26E-07"},6.90095765718951,29,691,12,16500,null,"GO:CC","cytosol","GO:0005829",{"v":5.44055826780843e-08,"d":"5.44E-08"},7.26435653409062,1288,716,104,16500,{"$nulls":5},"Os03g0755000","Os03g0755000",{"$nulls":10},"Os06g0551400",null,"Os12g0514500",null,"Os02g0122200","Os03g0570800","Os02g0122200","Os03g0574900","Os02g0126800","Os03g0574900",{"$nulls":7},"Os03g0851100",{"$nulls":6},"Os01g0326000",{"$nulls":9},"Os11g0484500","Os03g0603600",{"$nulls":3},"Os06g0335900","Os10g0467800","Os03g0719300","Os04g0474500","Os06g0132400","Os06g0677400",{"$nulls":46},"GO:0009058"," \"biosynthetic process\"",23.0854399078764,-5.13076828026902,0.905561326504849,0.07029592," null"]
[null,"GO:0034357","C","photosynthetic membrane",23,66,{"v":4.5e-08,"d":"4.50E-08"},{"v":1.2e-06,"d":"1.20E-06"},null,"GO:0009987","P","cellular process",328,7423,0.017,0.39,{"$nulls":17},"GO:CC","photosystem","GO:0009521",{"v":1.86621094098815e-07,"d":"1.87E-07"},6.72903926877305,83,691,19,16500,null,"GO:CC","cytoplasm","GO:0005737",{"v":7.73578332487971e-08,"d":"7.74E-08"},7.11149570310899,6353,716,355,16500,{"$nulls":5},"Os03g0758800","Os03g0758800",{"$nulls":10},"Os06g0669600",null,"Os12g0612400",null,"Os02g0126800","Os03g0574900","Os02g0126800","Os03g0711400","Os02g0131600","Os03g0711400",{"$nulls":7},"Os04g0112300",{"$nulls":6},"Os01g0327400",{"$nulls":9},"Os11g0525600","Os03g0700400",{"$nulls":3},"Os06g0561000","Os10g0539600","Os03g0722500","Os04g0477500","Os06g0564500","Os06g0704600",{"$nulls":46},"GO:0042180"," \"cellular ketone metabolic process\"",0.464973955371129,-5.67778070526608,0.809420377111908,0.07272255," null"]
[null,"GO:0044436","C","thylakoid part",20,54,{"v":1.5e-07,"d":"1.50E-07"},{"v":3.7e-06,"d":"3.70E-06"},null,"GO:0006414","P","translational elongation",5,35,0.018,0.4,{"$nulls":17},"GO:CC","photosystem II","GO:0009523",0.000143757215762961,3.84237034707389,69,691,14,16500,null,"GO:CC","endomembrane system","GO:0012505",{"v":5.22449033078143e-07,"d":"5.22E-07"},6.28195607025527,1430,716,109,16500,{"$nulls":5},"Os03g0806400","Os03g0806400",{"$nulls":10},"Os07g0201100",{"$nulls":3},"Os02g0131600","Os03g0711400","Os02g0131600","Os03g0787000","Os02g0159700","Os03g0787000",{"$nulls":7},"Os04g0118400",{"$nulls":6},"Os01g0329900",{"$nulls":10},"Os03g0701800",{"$nulls":3},"Os06g0679500","Os10g0577500","Os03g0735000","Os04g0513900","Os06g0704600","Os07g0176900",{"$nulls":46},"GO:0046112"," \"nucleobase biosynthetic process\"",0.323409708357845,-3.04095860767891,0.717993434686278,0.28776525," \"cellular ketone metabolic process\""]
[null,"GO:0009521","C","photosystem",14,35,{"v":5.4E-6,"d":"5.40E-06"},1.2E-4,null,"GO:0048519","P","negative regulation of biological process",6,50,0.02,0.43,{"$nulls":17},"GO:CC","cytoplasm","GO:0005737",1.45151844608605E-3,2.83817744072622,6353,691,321,16500,null,"GO:CC","COPI-coated vesicle","GO:0030137",3.89220447587983e-05,4.40980435226451,23,716,9,16500,{"$nulls":5},"Os03g0808600","Os03g0808600",{"$nulls":10},"Os07g0239400",{"$nulls":3},"Os02g0159700","Os03g0787000","Os02g0159700","Os03g0803000","Os02g0178400","Os03g0803000",{"$nulls":7},"Os04g0270100",{"$nulls":6},"Os01g0330100",{"$nulls":10},"Os03g0708000",{"$nulls":3},"Os06g0696400","Os11g0131900","Os03g0736300","Os04g0551200","Os07g0437500","Os07g0485400",{"$nulls":46},"GO:0046394"," \"carboxylic acid biosynthetic process\"",4.18421849683029,-3.85387196432176,0.660135827850557,0.37398426," \"cellular ketone metabolic process\""]
[null,"GO:0044435","C","plastid part",24,99,{"v":5.7e-06,"d":"5.70E-06"},1.2E-4,null,"GO:0006461","P","protein complex assembly",7,65,0.02,0.43,{"$nulls":17},"GO:CC","apoplast","GO:0048046",1.83249944110798E-3,2.73695614914181,199,691,23,16500,null,"GO:CC","COPI-coated vesicle membrane","GO:0030663",3.89220447587983e-05,4.40980435226451,23,716,9,16500,{"$nulls":5},"Os04g0127500","Os04g0127500",{"$nulls":10},"Os07g0243100",{"$nulls":3},"Os02g0178400","Os03g0803000","Os02g0178400","Os03g0819900","Os02g0189800","Os03g0819900",{"$nulls":7},"Os04g0346100",{"$nulls":6},"Os01g0343300",{"$nulls":10},"Os03g0780800",{"$nulls":3},"Os06g0696500","Os11g0204600","Os03g0749300","Os04g0568600","Os07g0485400","Os08g0424500",{"$nulls":46},"GO:0006066"," \"alcohol metabolic process\"",0.850355029059227,-2.01772876696043,0.811120803081778,0.402414," \"cellular ketone metabolic process\""]
[null,"GO:0009534","C","chloroplast thylakoid",13,32,{"v":1e-05,"d":"1.00E-05"},0.0002,null,"GO:0070271","P","protein complex biogenesis",7,65,0.02,0.43,{"$nulls":17},"GO:CC","organelle envelope","GO:0031967",0.00325936055858288,2.48686759414009,625,691,49,16500,null,"GO:CC","COPI vesicle coat","GO:0030126",3.89220447587983e-05,4.40980435226451,23,716,9,16500,{"$nulls":5},"Os04g0270100","Os04g0270100",{"$nulls":10},"Os07g0604500",{"$nulls":3},"Os02g0189800","Os03g0819900","Os02g0189800","Os03g0823700","Os02g0190300","Os03g0823700",{"$nulls":7},"Os04g0376000",{"$nulls":6},"Os01g0352100",{"$nulls":10},"Os03g0844600",{"$nulls":3},"Os06g0696600","Os11g0525600","Os03g0776000","Os04g0604900","Os07g0689600","Os08g0532200",{"$nulls":46},"GO:0044249"," \"cellular biosynthetic process\"",21.4060598833074,-4.76955107862173,0.76176519941479,0.47824393," \"cellular ketone metabolic process\""]
[null,"GO:0031976","C","plastid thylakoid",13,32,{"v":1e-05,"d":"1.00E-05"},0.0002,null,"GO:0051082","F","unfolded protein binding",15,98,{"v":2.8E-5,"d":"2.80E-05"},0.017,{"$nulls":17},"GO:CC","envelope","GO:0031975",0.00325936055858288,2.48686759414009,625,691,49,16500,null,"GO:CC","organelle membrane","GO:0031090",4.41208316066872e-05,4.35535631040247,1174,716,88,16500,{"$nulls":5},"Os04g0286300","Os04g0286300",{"$nulls":10},"Os08g0395300",{"$nulls":3},"Os02g0190300","Os03g0823700","Os02g0190300","Os03g0843100","Os02g0209000","Os03g0843100",{"$nulls":7},"Os04g0533000",{"$nulls":6},"Os01g0367100",{"$nulls":10},"Os03g0856700",{"$nulls":3},"Os07g0208500","Os12g0169600","Os03g0781400","Os04g0631200","Os08g0130100","Os09g0436500",{"$nulls":46},"GO:0006412"," \"translation\"",5.06183857202074,-4.85387196432176,0.726265477893741,0.49836849," \"cellular ketone metabolic process\""]
[null,"GO:0031984","C","organelle subcompartment",13,35,{"v":2.2e-05,"d":"2.20E-05"},0.0004,null,"GO:0032555","F","purine ribonucleotide binding",135,2461,0.00015,0.031,{"$nulls":17},"GO:CC","plastoglobule","GO:0010287",0.0137791275639091,1.86077827924804,35,691,8,16500,null,"GO:CC","Golgi apparatus","GO:0005794",5.2181138098926e-05,4.28248645293427,682,716,59,16500,{"$nulls":5},"Os04g0288500","Os04g0288500",{"$nulls":10},"Os08g0451000",{"$nulls":3},"Os02g0209000","Os03g0843100","Os02g0209000","Os04g0452700","Os02g0229400","Os04g0452700",{"$nulls":7},"Os04g0670800",{"$nulls":6},"Os01g0378100",{"$nulls":10},"Os04g0204400",{"$nulls":3},"Os07g0406300",null,"Os03g0808000","Os04g0640700","Os08g0342400","Os10g0516100",{"$nulls":46},"GO:0009112"," \"nucleobase metabolic process\"",0.458578407974081,-2.11918640771921,0.752529364695292,0.51769837," \"cellular ketone metabolic process\""]
[null,"GO:0044434","C","chloroplast part",22,95,{"v":2.5e-05,"d":"2.50E-05"},0.00044,null,"GO:0032553","F","ribonucleotide binding",135,2461,0.00015,0.031,{"$nulls":17},"KEGG","Metabolic pathways","KEGG:01100",3.30430332885377e-06,5.48092009210203,1649,166,112,3466,null,"GO:CC","Golgi membrane","GO:0000139",5.7555228082722e-05,4.2399152206988,221,716,28,16500,{"$nulls":5},"Os04g0352400","Os04g0352400",{"$nulls":10},"Os08g0535600",{"$nulls":3},"Os02g0229400","Os04g0452700","Os02g0229400","Os04g0468600","Os02g0323000","Os04g0468600",{"$nulls":7},"Os05g0150900",{"$nulls":6},"Os01g0495900",{"$nulls":10},"Os04g0382300",{"$nulls":3},"Os07g0424400",null,"Os03g0837100","Os04g0682300","Os08g0465800","Os11g0610900",{"$nulls":46},"GO:0009072"," \"aromatic amino acid family metabolic process\"",0.737160419200257,-2.16749108729376,0.746361594814128,0.55351416," \"cellular ketone metabolic process\""]
[null,"GO:0042651","C","thylakoid membrane",13,38,{"v":4.4e-05,"d":"4.40E-05"},0.00074,null,"GO:0000166","F","nucleotide binding",154,2928,3.3E-4,0.051,{"$nulls":17},"KEGG","Photosynthesis - antenna proteins","KEGG:00196",8.41009127840849E-5,4.07519929058805,15,166,7,3466,null,"GO:CC","coated vesicle membrane","GO:0030662",7.48140443791047e-05,4.12601686705786,64,716,14,16500,{"$nulls":5},"Os04g0365100","Os04g0365100",{"$nulls":10},"Os08g0563300",{"$nulls":3},"Os02g0323000","Os04g0468600","Os02g0323000","Os04g0509600","Os02g0496900","Os04g0509600",{"$nulls":7},"Os05g0169100",{"$nulls":6},"Os01g0508000",{"$nulls":10},"Os04g0430200",{"$nulls":3},"Os07g0552800",null,"Os04g0382300","Os05g0128900","Os08g0484500","Os12g0210200",{"$nulls":46},"GO:0018130"," \"heterocycle biosynthetic process\"",8.64654808206813,-2.92081875395238,0.754357089365537,0.56525437," \"cellular ketone metabolic process\""]
[null,"GO:0009535","C","chloroplast thylakoid membrane",11,30,1E-4,0.0016,null,"GO:0005488","F","binding",430,9475,0.00044,0.055,{"$nulls":17},"KEGG","Photosynthesis","KEGG:00195",0.000530508420928184,3.27530771801406,41,166,10,3466,null,"GO:CC","vesicle coat","GO:0030120",1.06643823452249E-4,3.97206429275354,48,716,12,16500,{"$nulls":5},"Os04g0370900","Os04g0370900",{"$nulls":10},"Os09g0266400",{"$nulls":3},"Os02g0496900","Os04g0509600","Os02g0496900","Os04g0612600","Os02g0497700","Os04g0612600",{"$nulls":7},"Os05g0207300",{"$nulls":6},"Os01g0509700",{"$nulls":10},"Os04g0445700",{"$nulls":3},"Os08g0116900",null,"Os04g0474500","Os05g0129200","Os08g0532200","Os12g0446900",{"$nulls":46},"GO:0006082"," \"organic acid metabolic process\"",8.96817105384944,-5.69897000433602,0.731358273409984,0.57214411," \"cellular ketone metabolic process\""]
[null,"GO:0055035","C","plastid thylakoid membrane",11,30,1E-4,0.0016,null,"GO:0017076","F","purine nucleotide binding",137,2588,0.00057,0.059,{"$nulls":17},"KEGG","Porphyrin and chlorophyll metabolism","KEGG:00860",4.12230671857067E-3,2.38485969784864,33,166,8,3466,null,"GO:CC","Golgi-associated vesicle membrane","GO:0030660",1.11665383202881E-4,3.95208143936439,66,716,14,16500,{"$nulls":5},"Os04g0402100","Os04g0402100",{"$nulls":10},"Os10g0377400",{"$nulls":3},"Os02g0497700","Os04g0612600","Os02g0497700","Os04g0643100","Os02g0573500","Os04g0643100",{"$nulls":7},"Os05g0452600",{"$nulls":6},"Os01g0518500",{"$nulls":10},"Os04g0577300",{"$nulls":3},"Os08g0160500",null,"Os04g0485300","Os05g0247100","Os09g0436500","Os12g0540900",{"$nulls":46},"GO:0034404"," \"nucleobase-containing small molecule biosynthetic process\"",0.270140027168784,-3.22184874961636,0.720201439846385,0.57735929," \"cellular ketone metabolic process\""]
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[{"$nulls":73},"Os12g0548300"]
[{"$nulls":73},"Os12g0562500"]
[{"$nulls":73},"Os12g0563000"]
[{"$nulls":73},"Os12g0564400"]
[{"$nulls":73},"Os12g0572800"]
[{"$nulls":73},"Os12g0575300"]
[{"$nulls":73},"Os12g0576100"]
[{"$nulls":73},"Os12g0580900"]
[{"$nulls":73},"Os12g0601300"]
[{"$nulls":73},"Os12g0601400"]
[{"$nulls":73},"Os12g0605800"]
[{"$nulls":73},"Os12g0609500"]
[{"$nulls":73},"Os12g0615400"]
[{"$nulls":73},"Os12g0628400"]

{"sheet":"Table S5 PlantMetGenMap","index":4,"n_rows":189,"n_cols":18,"rows_kept":189}
["Supplementary Table S5. List of differentially regulated significant pathways identified using PlantMetGenMap, with the list of DEGs and their log2FC involved in those pathways."]
[]
["S. No.","Pathway name","p-value","DEGs Involved in Pathway","Log2FC"]
[1,"cellulose biosynthesis",0.0009]
[{"$nulls":3},"LOC_Os05g31140",3.1620057]
[{"$nulls":3},"LOC_Os02g50040",1.841709]
[{"$nulls":3},"LOC_Os01g71820",3.953078]
[{"$nulls":3},"LOC_Os01g71690",-2.6030276]
[{"$nulls":3},"LOC_Os05g03840",2.024666]
[{"$nulls":3},"LOC_Os03g21210",2.7066774]
[{"$nulls":3},"LOC_Os03g52630",2.595525]
[{"$nulls":3},"LOC_Os09g25900",1.706642]
[{"$nulls":3},"LOC_Os10g32980",6.027947]
[{"$nulls":3},"LOC_Os10g42750",-1.2528273]
[{"$nulls":3},"LOC_Os09g25490",1.567009]
[{"$nulls":3},"LOC_Os08g06380",2.4047902]
[{"$nulls":3},"LOC_Os07g24190",3.1942482]
[{"$nulls":3},"LOC_Os07g36610",1.5876184]
[{"$nulls":3},"LOC_Os07g36690",2.23083]
[{"$nulls":3},"LOC_Os07g36700",1.7108744]
[{"$nulls":3},"LOC_Os03g59340",2.2981665]
[{"$nulls":3},"LOC_Os01g54620",5.462513]
[2,"NAD salvage pathway II",0.0065,{"$nulls":10},"LOC_Os07g46940","LOC_Os07g46950","LOC_Os07g46980","LOC_Os06g08600","LOC_Os04g32080"]
[{"$nulls":3},"LOC_Os07g48320",3.1730137]
[{"$nulls":3},"LOC_Os05g09724",7.353548]
[{"$nulls":3},"LOC_Os05g10210",6.838286]
[{"$nulls":3},"LOC_Os05g10310",3.1318233]
[{"$nulls":3},"LOC_Os05g10370",2.9939125]
[{"$nulls":3},"LOC_Os05g10330",2.885413]
[{"$nulls":3},"LOC_Os03g13540",1.3971219]
[{"$nulls":3},"LOC_Os01g05800",1.532559]
[{"$nulls":3},"LOC_Os01g09540",3.958133]
[3,"β-D-glucuronide degradation",0.0069]
[{"$nulls":3},"LOC_Os12g38920",1.2891626]
[{"$nulls":3},"LOC_Os06g08090",5.533913]
[{"$nulls":3},"LOC_Os03g11320",1.5144078]
[4,"Calvin cycle",0.0148]
[{"$nulls":3},"LOC_Os06g04270",2.580087]
[{"$nulls":3},"LOC_Os09g36450",2.0614798]
[{"$nulls":3},"LOC_Os01g62420",-1.489267]
[{"$nulls":3},"LOC_Os05g36270",1.2552519]
[{"$nulls":3},"LOC_Os03g16050",2.447728]
[{"$nulls":3},"LOC_Os01g64660",2.356459]
[{"$nulls":3},"LOC_Os06g40640",2.6601543]
[{"$nulls":3},"LOC_Os01g67860",-0.97642773]
[{"$nulls":3},"LOC_Os06g04270",2.580087]
[{"$nulls":3},"LOC_Os03g56869",3.2535255]
[{"$nulls":3},"LOC_Os07g08030",2.3344696]
[{"$nulls":3},"LOC_Os07g13530",-1.0277327]
[{"$nulls":3},"LOC_Os02g47020",2.9928296]
[{"$nulls":3},"LOC_Os12g17600",4.865291]
[{"$nulls":3},"LOC_Os12g19381",4.041716]
[{"$nulls":3},"LOC_Os12g19470",6.6509457]
[{"$nulls":3},"LOC_Os05g41640",4.0993204]
[{"$nulls":3},"LOC_Os03g27770",2.5141485]
[{"$nulls":3},"LOC_Os02g07260",-0.987922]
[5,"oxidative ethanol degradation III",0.0266]
[{"$nulls":3},"LOC_Os07g49400",-1.2588414]
[{"$nulls":3},"LOC_Os04g14680",4.304131]
[{"$nulls":3},"LOC_Os02g02400",2.5351803]
[{"$nulls":3},"LOC_Os02g32490",-1.5875002]
[6,"ent-kaurene biosynthesis",0.0285]
[{"$nulls":3},"LOC_Os02g17780",1.4828542]
[{"$nulls":3},"LOC_Os04g52210",1.7045217]
[{"$nulls":3},"LOC_Os04g52230",1.1875777]
[7,"citrulline biosynthesis",0.0298]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os04g46460",1.1363305]
[{"$nulls":3},"LOC_Os01g12710",1.207028]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[{"$nulls":3},"LOC_Os08g32870",1.1904254]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[{"$nulls":3},"LOC_Os03g44150",-1.3771795]
[8,"gluconeogenesis",0.0336]
[{"$nulls":3},"LOC_Os07g43700",1.5200287]
[{"$nulls":3},"LOC_Os04g46560",3.4666278]
[{"$nulls":3},"LOC_Os08g27840",-1.3273716]
[{"$nulls":3},"LOC_Os02g14770",-1.3553886]
[{"$nulls":3},"LOC_Os01g54230",1.1214341]
[{"$nulls":3},"LOC_Os06g30310",1.0321459]
[{"$nulls":3},"LOC_Os03g15950",-1.1778779]
[{"$nulls":3},"LOC_Os05g41460",-1.2893785]
[{"$nulls":3},"LOC_Os03g27770",2.5141485]
[{"$nulls":3},"LOC_Os02g07260",-0.987922]
[{"$nulls":3},"LOC_Os08g03290",-1.3236626]
[{"$nulls":3},"LOC_Os04g38600",6.2933326]
[{"$nulls":3},"LOC_Os03g03720",3.3167012]
[{"$nulls":3},"LOC_Os02g38920",-0.9919462]
[{"$nulls":3},"LOC_Os06g40640",2.6601543]
[{"$nulls":3},"LOC_Os01g67860",-0.97642773]
[{"$nulls":3},"LOC_Os05g36270",1.2552519]
[{"$nulls":3},"LOC_Os03g16050",2.447728]
[{"$nulls":3},"LOC_Os01g64660",2.356459]
[9,"isoleucine degradation II",0.0374]
[{"$nulls":3},"LOC_Os02g17330",1.4167501]
[{"$nulls":3},"LOC_Os03g01600",2.145069]
[{"$nulls":3},"LOC_Os11g10480",-1.0419011]
[{"$nulls":3},"LOC_Os11g10510",-2.2529678]
[{"$nulls":3},"LOC_Os11g25160",-1.3608128]
[{"$nulls":3},"LOC_Os10g40030",2.2432687]
[{"$nulls":3},"LOC_Os07g46840",2.8837898]
[{"$nulls":3},"LOC_Os07g46846",2.6424472]
[{"$nulls":3},"LOC_Os07g46940",3.3321412]
[{"$nulls":3},"LOC_Os07g46950",3.0534332]
[{"$nulls":3},"LOC_Os07g46980",1.6801382]
[{"$nulls":3},"LOC_Os06g08600",1.2009751]
[{"$nulls":3},"LOC_Os04g32080",3.4390924]
[10,"proline biosynthesis II",0.0392]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os04g46460",1.1363305]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[{"$nulls":3},"LOC_Os08g32870",1.1904254]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[11,"proline biosynthesis I",0.0392]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os04g46460",1.1363305]
[{"$nulls":3},"LOC_Os01g12710",1.207028]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[{"$nulls":3},"LOC_Os08g32870",1.1904254]
[{"$nulls":3},"LOC_Os05g38150",1.34377]
[{"$nulls":3},"LOC_Os01g62900",2.543742]
[12,"pinobanksin biosynthesis",0.0423]
[{"$nulls":3},"LOC_Os07g11440",4.0250535]
[{"$nulls":3},"LOC_Os03g60509",4.5862184]
[13,"oxidative ethanol degradation I",0.0433]
[{"$nulls":3},"LOC_Os11g10480",-1.0419011]
[{"$nulls":3},"LOC_Os11g10510",-2.2529678]
[{"$nulls":3},"LOC_Os11g25160",-1.3608128]
[{"$nulls":3},"LOC_Os10g40030",2.2432687]
[{"$nulls":3},"LOC_Os07g46840",2.8837898]
[{"$nulls":3},"LOC_Os07g46846",2.6424472]
[{"$nulls":3},"LOC_Os07g46940",3.3321412]
[{"$nulls":3},"LOC_Os07g46950",3.0534332]
[{"$nulls":3},"LOC_Os07g46980",1.6801382]
[{"$nulls":3},"LOC_Os06g08600",1.2009751]
[{"$nulls":3},"LOC_Os04g32080",3.4390924]
[{"$nulls":3},"LOC_Os02g32490",-1.5875002]
[14,"DIMBOA-glucoside degradation",0.0453]
[{"$nulls":3},"LOC_Os09g33710",3.6288593]
[{"$nulls":3},"LOC_Os04g43410",3.3421793]
[{"$nulls":3},"LOC_Os01g70520",1.3126802]
[15,"serine biosynthesis",0.0453]
[{"$nulls":3},"LOC_Os04g55720",-1.8694534]
[{"$nulls":3},"LOC_Os03g06200",-1.5750166]
[{"$nulls":3},"LOC_Os11g41160",-1.4835685]
[16,"fatty acid β-oxidation II (plant, saturated)",0.05]
[{"$nulls":3},"LOC_Os12g07110",1.5418793]
[{"$nulls":3},"LOC_Os05g04170",2.0293887]
[{"$nulls":3},"LOC_Os01g48910",-1.2221404]
[{"$nulls":3},"LOC_Os11g39220",1.5702606]
[{"$nulls":3},"LOC_Os02g43710",1.0588921]
[17,"xylulose-monophosphate cycle",0.05]
[{"$nulls":3},"LOC_Os06g04270",2.580087]
[{"$nulls":3},"LOC_Os05g36270",1.2552519]
[{"$nulls":3},"LOC_Os03g16050",2.447728]
[{"$nulls":3},"LOC_Os01g64660",2.356459]
[{"$nulls":3},"LOC_Os06g40640",2.6601543]
[{"$nulls":3},"LOC_Os01g67860",-0.97642773]
[18,"superpathway of ribose and deoxyribose phosphate degradation",0.05]
[{"$nulls":3},"LOC_Os10g42240",2.759031]
[{"$nulls":3},"LOC_Os08g45180",2.9968693]
[{"$nulls":3},"LOC_Os06g12600",1.0679398]
[{"$nulls":3},"LOC_Os01g63220",1.4919344]
[{"$nulls":3},"LOC_Os06g04270",2.580087]
[19,"flavonoid biosynthesis",0.05]
[{"$nulls":3},"LOC_Os08g14760",1.5977544]
[{"$nulls":3},"LOC_Os02g46970",4.7170224]
[{"$nulls":3},"LOC_Os07g11440",4.0250535]
[{"$nulls":3},"LOC_Os07g11440",4.0250535]
[{"$nulls":3},"LOC_Os11g32650",4.57839]
[{"$nulls":3},"LOC_Os03g60509",4.5862184]
[20,"mixed acid fermentation",0.0501]
[{"$nulls":3},"LOC_Os08g27840",-1.3273716]
[{"$nulls":3},"LOC_Os02g14770",-1.3553886]
[{"$nulls":3},"LOC_Os01g54230",1.1214341]
[{"$nulls":3},"LOC_Os07g43700",1.5200287]
[{"$nulls":3},"LOC_Os04g46560",3.4666278]
[{"$nulls":3},"LOC_Os11g10480",-1.0419011]
[{"$nulls":3},"LOC_Os11g10510",-2.2529678]
[{"$nulls":3},"LOC_Os10g40030",2.2432687]
[{"$nulls":3},"LOC_Os07g46840",2.8837898]
[{"$nulls":3},"LOC_Os07g46846",2.6424472]
[{"$nulls":3},"LOC_Os07g46940",3.3321412]
[{"$nulls":3},"LOC_Os07g46950",3.0534332]
[{"$nulls":3},"LOC_Os07g46980",1.6801382]
[{"$nulls":3},"LOC_Os06g08600",1.2009751]
[{"$nulls":3},"LOC_Os04g32080",3.4390924]

{"sheet":"Table S6 MapMan","index":5,"n_rows":2050,"n_cols":65,"rows_kept":2050,"merged":[[0,43,0,50],[0,57,0,64],[1,1,1,6],[1,8,1,13],[1,15,1,20],[1,22,1,27],[1,29,1,34],[1,36,1,41],[71,53,82,53],[594,22,594,25],[594,26,594,29]]}
["Supplementary Table S6. Details of all the functional bins for the identified DEGs in d1 leaf transcriptome identified using MapMan.",{"$nulls":42},"Large enzyme families for heatmap",{"$nulls":13},"Photosynthesis"]
[null,"Overview ",{"$nulls":6},"Regulation overview",{"$nulls":6},"Cell Function Overview",{"$nulls":6},"Cellular response overview",{"$nulls":6},"Large enzyme families",{"$nulls":6},"Photosynthesis",{"$nulls":6},"NAME","NAME","WT_T_1","WT_T_2","WT_T_3","MT_T_1","MT_T_2","MT_T_3",null,"17.2.2","hormone metabolism.auxin.signal transduction","Os01g0919800","Transcript",null,"NAME","NAME","WT_T_1","WT_T_2","WT_T_3","MT_T_1","MT_T_2","MT_T_3"]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os01g0720500","Transcript","moderately similar to ( 410) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 443) CB21_ORYSA Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",8.342963,null,27.3,"RNA.regulation of transcription","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584,null,31.2,"cell.division","Os09g0515100","Transcript","nearly identical (1078) AT1G05910 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARDmoderately similar to ( 219) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) RPT1 PRK03992 SpoVK AAA HflB hflB COG1223 BROMO protein|bromodomain protein 103, putative, expressed",-1.4211426,null,20.1,"stress.biotic","Os07g0417600","Transcript","weakly similar to ( 192) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 181) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin, putative, expressed",1.7079655,null,26.1,"misc.cytochrome P450","Os06g0641500","Transcript","moderately similar to ( 264) AT5G24950 | Symbols: CYP71A15 | CYP71A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8595209-8597761 REVERSEmoderately similar to ( 333) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",3.102296,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os01g0720500","Transcript","moderately similar to ( 410) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 443) CB21_ORYSA Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",8.342963,null,"Os05g0527000","UDP glucosyl and glucoronyl transferases",-5.241405,-8.406172,-4.2571907,-5.5646753,-3.0739017,-3.2748318,null,"17.2.2","hormone metabolism.auxin.signal transduction","Os11g0169200","Transcript",null,"Os02g0101500","OsHPR1",-2.982739,-4.827013,-6.871338,2.7908716,1.4978724,2.1859236]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0577600","Transcript","moderately similar to ( 345) AT3G61470 | Symbols: LHCA2 | LHCA2; chlorophyll binding | chr3:22745736-22747032 FORWARDmoderately similar to ( 355) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.912947,null,27.3,"RNA.regulation of transcription","Os08g0107800","Transcript","moderately similar to ( 286) AT1G62910 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:23299060-23303162 FORWARDhighly similar to ( 786) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|Rf1, mitochondrial precursor, putative, expressed",-1.7094434,null,31.2,"cell.division","Os01g0846800","Transcript","highly similar to ( 509) AT3G55580 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD ATS1 protein|regulator of chromosome condensation, putative, expressed",-1.3124882,null,20.1,"stress.biotic","Os09g0479600","Transcript","weakly similar to ( 132) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",2.4746897,null,26.1,"misc.cytochrome P450","Os10g0378100","Transcript","weakly similar to ( 152) AT2G32440 | Symbols: KAO2, CYP88A4 | KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding | chr2:13775668-13777783 FORWARDweakly similar to ( 147) KAO1_HORVU Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) CypX p450 protein|cytochrome P450, putative, expressed",2.1656606,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0577600","Transcript","moderately similar to ( 345) AT3G61470 | Symbols: LHCA2 | LHCA2; chlorophyll binding | chr3:22745736-22747032 FORWARDmoderately similar to ( 355) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.912947,null,"Os03g0785900","Glutathione S transferases",{"$nulls":3},-5.2378464,-2.7752495,-4.363494,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os04g0337500","Transcript",null,"Os01g0866400","OsFBP1",-1.712327,-3.6205258,-4.1154385,3.2108202,1.5461798,2.312377]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os11g0242800","Transcript","moderately similar to ( 256) AT4G10340 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496 FORWARDweakly similar to ( 132) CB2_PHYPA Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.8949242,null,"27.3.1","RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family","Os02g0683500","Transcript","moderately similar to ( 202) AT1G01030 | Symbols: NGA3 | NGA3 (NGATHA3); transcription factor | chr1:11864-12940 REVERSEB3 protein|B3 DNA binding domain containing protein, expressed",-1.3406903,null,31.2,"cell.division","Os01g0700200","Transcript","highly similar to ( 984) AT4G14368 | Symbols: | zinc ion binding | chr4:8274313-8278810 REVERSE ATS1 protein|regulator of chromosome condensation, putative, expressed",2.221728,null,20.1,"stress.biotic","Os05g0141300","Transcript","moderately similar to ( 271) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEvery weakly similar to (94.4) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",0.97811747,null,26.1,"misc.cytochrome P450","Os09g0264400","Transcript","moderately similar to ( 402) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 395) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",4.044229,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os11g0242800","Transcript","moderately similar to ( 256) AT4G10340 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496 FORWARDweakly similar to ( 132) CB2_PHYPA Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.8949242,null,"Os10g0527800","Glutathione S transferases",-1.0524449,-2.129528,-1.6077366,-2.9860644,-2.827804,-3.0743976,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os09g0546900","Transcript",null,"Os01g0228600","OsHPR2",1.2386446,1.3246479,0.7362051,1.8481588,0.77893543,1.7777891]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os09g0439500","Transcript","moderately similar to ( 358) AT1G19150 | Symbols: LHCA6, LHCA2*1 | LHCA6; chlorophyll binding | chr1:6612806-6613799 FORWARDmoderately similar to ( 285) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.9424746,null,"27.3.2","RNA.regulation of transcription.Alfin-like","Os07g0233300","Transcript","moderately similar to ( 295) AT5G05610 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding | chr5:1677331-1678942 REVERSE protein|PHD finger protein, putative, expressed",-1.0386173,null,31.2,"cell.division","Os05g0579800","Transcript","moderately similar to ( 291) AT2G18290 | Symbols: APC10 | anaphase-promoting complex, subunit 10 family / APC10 family | chr2:7948522-7950096 REVERSE APC10 DOC1 protein|anaphase-promoting complex subunit 10, putative, expressed",-0.989391,null,20.1,"stress.biotic","Os01g0248300","Transcript","weakly similar to ( 199) AT1G78780 | Symbols: | pathogenesis-related family protein | chr1:29621447-29622431 REVERSEmoderately similar to ( 332) PRPX_HORVU Pathogen-related protein - Hordeum vulgare (Barley) protein|pathogen-related protein, putative, expressed",1.8871027,null,26.1,"misc.cytochrome P450","Os02g0173100","Transcript","highly similar to ( 803) AT4G15110 | Symbols: CYP97B3 | CYP97B3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:8629922-8632993 REVERSEhighly similar to ( 825) C97B2_SOYBN Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.1731826,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os09g0439500","Transcript","moderately similar to ( 358) AT1G19150 | Symbols: LHCA6, LHCA2*1 | LHCA6; chlorophyll binding | chr1:6612806-6613799 FORWARDmoderately similar to ( 285) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.9424746,null,"Os01g0949700","Glutathione S transferases",-1.9611945,-3.8274298,-3.3054352,-2.8143435,-1.9538116,-3.2970257,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0556400","Transcript",null,"Os09g0411650","RuBisCO methyltra",0.7425256,1.4581704,0.9134464,1.0128899,0.7886033,1.9358482]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os09g0346500","Transcript","moderately similar to ( 413) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 471) CB21_ORYSA Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.3939323,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os10g0371100","Transcript","weakly similar to ( 109) AT1G78080 | Symbols: RAP2.4 | RAP2.4 (related to AP2 4); DNA binding / transcription factor | chr1:29364790-29365794 FORWARDAP2 AP2 protein|ethylene-responsive transcription factor, putative, expressed",1.6778313,null,31.2,"cell.division","Os07g0570700","Transcript","weakly similar to ( 189) AT3G63190 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSEweakly similar to ( 197) RRFC_SPIOL Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) - Spinacia oleracea (Spinach) frr Frr RRF RRF protein|ribosome recycling factor, putative, expressed",1.8791462,null,20.1,"stress.biotic","Os11g0606200","Transcript","very weakly similar to (87.0) AT1G53350 | Symbols: | ATP binding | chr1:19903899-19907515 FORWARD NB-ARC protein|Leucine Rich Repeat family protein, expressed",2.423384,null,26.1,"misc.cytochrome P450","Os12g0582000","Transcript","moderately similar to ( 320) AT4G37310 | Symbols: CYP81H1 | CYP81H1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17556152-17558833 REVERSEmoderately similar to ( 219) C82A4_SOYBN Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.2817377,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os09g0346500","Transcript","moderately similar to ( 413) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 471) CB21_ORYSA Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII type I CAB-1) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.3939323,null,"Os02g0601500","cytochrome P450",{"$nulls":3},-2.7931871,-3.2444482,-3.2961369,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os10g0510500","Transcript",null,"Os03g0129300","GADPH",2.753037,2.7336755,1.1224647,4.048905,2.3289924,3.572206]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os08g0435900","Transcript","moderately similar to ( 373) AT3G47470 | Symbols: LHCA4, CAB4 | LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4); chlorophyll binding | chr3:17493622-17494773 REVERSEmoderately similar to ( 223) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.3340163,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108,null,31.2,"cell.division","Os04g0462900","Transcript","moderately similar to ( 326) AT5G40770 | Symbols: ATPHB3 | ATPHB3 (PROHIBITIN 3) | chr5:16315589-16316621 REVERSE Band_7_prohibitin PHB Band_7 HflC protein|prohibitin, putative, expressed",-1.0250721,null,20.1,"stress.biotic","Os06g0287700","Transcript","very weakly similar to (84.3) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|NBS-LRR disease resistance protein, putative, expressed",1.927749,null,26.1,"misc.cytochrome P450","Os05g0424300","Transcript","moderately similar to ( 246) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 278) C71A2_SOLME Cytochrome P450 71A2 (EC 1.14.-.-) (CYPLXXIA2) (P-450EG4) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",-1.4884156,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os08g0435900","Transcript","moderately similar to ( 373) AT3G47470 | Symbols: LHCA4, CAB4 | LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4); chlorophyll binding | chr3:17493622-17494773 REVERSEmoderately similar to ( 223) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.3340163,null,"Os01g0176000","UDP glucosyl and glucoronyl transferases",-2.6100159,-3.7566695,-3.8584275,-2.7439508,-1.815,-3.9210768,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os06g0499500","Transcript",null,"Os05g0438600","OscFBP2",2.1734018,2.7567134,1.1404433,1.13973,1.8426747,0.78335094]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os03g0592500","Transcript","moderately similar to ( 459) AT3G27690 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3; chlorophyll binding | chr3:10256002-10256921 FORWARDhighly similar to ( 526) CB23_ORYSA Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.4201694,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0341000","Transcript","very weakly similar to (80.1) AT1G72360 | Symbols: | ethylene-responsive element-binding protein, putative | chr1:27241904-27242777 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.8170595,null,31.2,"cell.division","Os08g0430700","Transcript","highly similar to ( 544) AT5G16040 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr5:5240860-5243308 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.0921475,null,20.1,"stress.biotic","Os12g0438300","Transcript","very weakly similar to (92.0) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.657742,null,26.1,"misc.cytochrome P450","Os10g0378000","Transcript","weakly similar to ( 144) AT2G32440 | Symbols: KAO2, CYP88A4 | KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding | chr2:13775668-13777783 FORWARDweakly similar to ( 137) KAO1_HORVU Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) CypX protein|ent-kaurenoic acid oxidase 1, putative, expressed",1.8747015,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os03g0592500","Transcript","moderately similar to ( 459) AT3G27690 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3; chlorophyll binding | chr3:10256002-10256921 FORWARDhighly similar to ( 526) CB23_ORYSA Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.4201694,null,"Os01g0224700","oxidases - copper, flavone etc.",-4.14922,-3.9187636,-4.467674,-2.4644132,-2.6493292,-3.9241548,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194900","Transcript",null,"Os03g0279950","Kinase binding protein (Fragment).",1.5840173,2.236854,1.1486702,3.3934135,2.867999,4.416945]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os02g0764500","Transcript","moderately similar to ( 295) AT1G45474 | Symbols: LHCA5 | LHCA5; pigment binding | chr1:17179353-17180439 FORWARDweakly similar to ( 157) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.271949,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os01g0165000","Transcript","weakly similar to ( 124) AT2G40340 | Symbols: | AP2 domain-containing transcription factor, putative (DRE2B) | chr2:16848665-16850357 REVERSEAP2 AP2 protein|AP2 domain containing protein, expressed",-0.9488856,null,31.2,"cell.division","Os04g0583700","Transcript","highly similar to ( 659) AT1G65920 | Symbols: | regulator of chromosome condensation (RCC1) family protein / zinc finger protein-related | chr1:24525267-24529204 REVERSE ATS1 protein|ZR1 protein, putative, expressed",2.5869057,null,20.1,"stress.biotic","Os11g0701000","Transcript","weakly similar to ( 172) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 368) XIP1_ORYSA Xylanase inhibitor protein 1 precursor (Class III chitinase homolog a) (RIXI protein) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.0844676,null,26.1,"misc.cytochrome P450","Os05g0101600","Transcript","moderately similar to ( 310) AT1G19630 | Symbols: CYP722A1 | CYP722A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:6785427-6787967 REVERSEweakly similar to ( 131) C90D2_ORYSA Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) p450 CypX protein|cytochrome P450, putative, expressed",1.2058522,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os02g0764500","Transcript","moderately similar to ( 295) AT1G45474 | Symbols: LHCA5 | LHCA5; pigment binding | chr1:17179353-17180439 FORWARDweakly similar to ( 157) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.271949,null,"Os07g0152700","Glutathione S transferases",{"$nulls":3},-2.3355908,-1.146913,-2.3250613,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os01g0618100","Transcript",null,"Os02g0750200","ATP synthase F1",2.2946835,1.9840908,1.2291327,3.5932865,2.496624,3.7933455]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os04g0457000","Transcript","moderately similar to ( 356) AT1G15820 | Symbols: LHCB6, CP24 | LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6); chlorophyll binding | chr1:5446685-5447676 REVERSEmoderately similar to ( 331) CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",5.0769076,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057,null,31.2,"cell.division","Os02g0554100","Transcript","highly similar to ( 622) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",2.4206684,null,20.1,"stress.biotic","Os11g0157200","Transcript","weakly similar to ( 181) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.240785,null,26.1,"misc.cytochrome P450","Os12g0582700","Transcript","moderately similar to ( 320) AT4G37360 | Symbols: CYP81D2 | CYP81D2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17567124-17568858 REVERSEmoderately similar to ( 223) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.8259779,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os04g0457000","Transcript","moderately similar to ( 356) AT1G15820 | Symbols: LHCB6, CP24 | LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6); chlorophyll binding | chr1:5446685-5447676 REVERSEmoderately similar to ( 331) CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",5.0769076,null,"Os06g0522300","Peroxidases",{"$nulls":3},-2.307919,-1.732326,-2.9507022,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194600","Transcript",null,"Os08g0347500","tetratricopeptide repeat",2.0891075,2.2205725,1.4378939,2.2408113,0.79184055,2.2857046]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os01g0600900","Transcript","moderately similar to ( 424) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 466) CB22_ORYSA Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.538292,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0657000","Transcript","weakly similar to ( 132) AT2G44940 | Symbols: | AP2 domain-containing transcription factor TINY, putative | chr2:18537294-18538181 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",4.613399,null,31.2,"cell.division","Os04g0676000","Transcript","highly similar to ( 647) AT3G19180 | Symbols: ARC6H, PARC6 | ARC6H | chr3:6632810-6636547 FORWARD protein|OsFBX154 - F-box domain containing protein, expressed",0.97781354,null,20.1,"stress.biotic","Os11g0214700","Transcript","protein|expressed protein",1.9574338,null,26.1,"misc.cytochrome P450","Os03g0248300","Transcript","moderately similar to ( 409) AT2G45570 | Symbols: CYP76C2 | CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18779935-18781922 REVERSEmoderately similar to ( 315) C76A2_SOLME Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",2.731105,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os01g0600900","Transcript","moderately similar to ( 424) AT2G34430 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll binding | chr2:14524818-14525618 FORWARDmoderately similar to ( 466) CB22_ORYSA Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP) - Oryza sativa (Rice)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.538292,null,"Os01g0597800","UDP glucosyl and glucoronyl transferases",-2.6879373,-5.762358,-4.9939814,-2.2773237,-1.5920234,-2.3827338,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os07g0475700","Transcript",null,"Os07g0562700","TypeIII chlorophyll a/b-binding protein (Fragment).",2.583377,2.4275274,1.5429144,4.8438587,3.5534363,4.920637]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0558400","Transcript","moderately similar to ( 442) AT5G01530 | Symbols: | chlorophyll A-B binding protein CP29 (LHCB4) | chr5:209084-210243 FORWARDmoderately similar to ( 242) CB29_CHLRE Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtiiChloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.7045493,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os09g0518900","Transcript","moderately similar to ( 245) AT1G01180 | Symbols: | unknown protein | chr1:75633-77446 FORWARD protein|expressed protein",2.819342,null,31.2,"cell.division","Os04g0435700","Transcript","highly similar to ( 586) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.2835745,null,20.1,"stress.biotic","Os05g0247100","Transcript","weakly similar to ( 179) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 333) XIP2_ORYSA Xylanase inhibitor protein 2 precursor (Class III chitinase homolog h) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.9267607,null,26.1,"misc.cytochrome P450","Os02g0185300","Transcript","moderately similar to ( 282) AT3G26230 | Symbols: CYP71B24 | CYP71B24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9598200-9599892 REVERSEmoderately similar to ( 357) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450 71D10, putative, expressed",-1.1336023,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0558400","Transcript","moderately similar to ( 442) AT5G01530 | Symbols: | chlorophyll A-B binding protein CP29 (LHCB4) | chr5:209084-210243 FORWARDmoderately similar to ( 242) CB29_CHLRE Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtiiChloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.7045493,null,"Os01g0949750","Glutathione S transferases",-1.4359045,-2.9724588,-2.17624,-2.1855612,-1.585547,-3.2539163,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0437200","Transcript",null,"Os09g0535000","Triosephosphate isomerase.",1.5642576,2.3626785,1.8194208,2.1280499,1.6616573,2.3947325]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0562700","Transcript","moderately similar to ( 441) AT5G54270 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule | chr5:22038424-22039383 FORWARDmoderately similar to ( 464) CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.4393106,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0346200","Transcript","very weakly similar to (92.8) AT5G05410 | Symbols: DREB2A, DREB2 | DREB2A; DNA binding / transcription activator/ transcription factor | chr5:1602650-1603657 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.1557907,null,"31.2.5","cell.division.plastid","Os02g0834700","Transcript","moderately similar to ( 384) AT2G21280 | Symbols: GC1, ATSULA, SULA | SULA; binding / catalytic/ coenzyme binding | chr2:9110502-9112679 REVERSE COG1090 WcaG Epimerase protein|cell division inhibitor, putative, expressed",3.2026384,null,20.1,"stress.biotic","Os01g0104900","Transcript","moderately similar to ( 357) AT1G27620 | Symbols: | transferase family protein | chr1:9608444-9610432 FORWARDweakly similar to ( 123) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",2.1284437,null,26.1,"misc.cytochrome P450","Os10g0515200","Transcript","moderately similar to ( 460) AT1G64940 | Symbols: CYP89A6 | CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:24123789-24125324 FORWARDmoderately similar to ( 322) C77A3_SOYBN Cytochrome P450 77A3 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|transposon protein, putative, unclassified, expressed",-1.4838794,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os07g0562700","Transcript","moderately similar to ( 441) AT5G54270 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule | chr5:22038424-22039383 FORWARDmoderately similar to ( 464) CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplast precursor (CAB) - Hordeum vulgare (Barley)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",4.4393106,null,"Os01g0773600","Gluco-, Galacto- and mannosidases",-1.9836078,-1.5256267,-0.7649884,-2.1013575,-0.60980844,-1.4413934,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0643800","Transcript",null,"Os09g0439500","TypeII chlorophyll a/b binding protein from photosystem I precursor.",3.0065646,2.6955667,1.8645091,4.3096247,2.821828,4.6959715]
[null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os06g0320500","Transcript","moderately similar to ( 354) AT3G54890 | Symbols: LHCA1 | LHCA1; chlorophyll binding | chr3:20339881-20340922 REVERSEweakly similar to ( 139) CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",2.7043002,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0818800","Transcript","moderately similar to ( 256) AT4G36920 | Symbols: AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor | chr4:17400998-17403140 FORWARDweakly similar to ( 151) BBM1_BRANA Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape)AP2 protein|AP2 domain containing protein, expressed",-1.0689335,{"$nulls":8},20.1,"stress.biotic","Os02g0612200","Transcript","protein|expressed protein",-1.4583602,null,26.1,"misc.cytochrome P450","Os03g0140100","Transcript","moderately similar to ( 464) AT4G39490 | Symbols: CYP96A10 | CYP96A10; electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:18365229-18366788 FORWARDweakly similar to ( 114) C82A1_PEA Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) p450 CypX protein|cytochrome P450 protein, putative, expressed",1.8545698,null,"1.1.1.1","PS.lightreaction.photosystem II.LHC-II","Os06g0320500","Transcript","moderately similar to ( 354) AT3G54890 | Symbols: LHCA1 | LHCA1; chlorophyll binding | chr3:20339881-20340922 REVERSEweakly similar to ( 139) CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) - Pinus sylvestris (Scots pine)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",2.7043002,null,"Os11g0210500","alcohol dehydrogenases",2.2246857,3.738058,3.7147532,-1.9112673,-1.3448238,-3.5028124,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0158800","Transcript",null,"Os11g0242800","OsLHCB5",3.1349134,2.920867,2.051712,4.4666157,3.2298222,3.9883347]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0504500","Transcript","protein|thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed",2.366072,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0389000","Transcript","weakly similar to ( 137) AT2G41710 | Symbols: | ovule development protein, putative | chr2:17400274-17402903 REVERSE protein|AP2 domain containing protein, expressed",2.0078347,null,31.3,"cell.cycle","Os03g0123300","Transcript","highly similar to ( 608) AT4G22910 | Symbols: FZR2 | FZR2 (FIZZY-RELATED 2); signal transducer | chr4:12012743-12015663 FORWARD WD40 COG2319 protein|WD repeat-containing protein, putative, expressed",1.0072118,null,20.1,"stress.biotic","Os03g0709200","Transcript","weakly similar to ( 169) AT5G43470 | Symbols: RPP8, HRT, RCY1 | RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8); nucleotide binding | chr5:17463130-17466658 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",-1.0200915,null,26.1,"misc.cytochrome P450","Os11g0119700","Transcript","moderately similar to ( 311) AT5G24910 | Symbols: CYP714A1 | CYP714A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8567674-8570260 REVERSEweakly similar to ( 176) C72A1_CATRO Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) p450 CypX protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",2.4014504,{"$nulls":8},"Os07g0489200","UDP glucosyl and glucoronyl transferases",-3.7405267,-4.6734853,-4.4057384,-1.8259091,-2.0510793,-3.1914287,null,"17.1.1","hormone metabolism.abscisic acid.synthesis-degradation","Os03g0250200","Transcript",null,"Os10g0461400","PsbP family protein, expressed.",2.425559,2.9567423,2.1304188,2.4649715,1.226099,2.6062202]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os07g0544800","Transcript","weakly similar to ( 162) AT4G21280 | Symbols: PSBQ, PSBQA, PSBQ-1 | oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | chr4:11334446-11335587 FORWARDweakly similar to ( 191) PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) - Zea mays (Maize)PsbQ protein|oxygen evolving enhancer protein 3 domain containing protein, expressed",2.661773,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696,null,31.3,"cell.cycle","Os01g0805600","Transcript","moderately similar to ( 340) AT5G06150 | Symbols: CYC1BAT, CYCB1;2 | CYC1BAT; cyclin-dependent protein kinase regulator | chr5:1859542-1861570 REVERSEmoderately similar to ( 366) CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) Cyclin_N COG5024 Cyclin_C CYCLIN protein|cyclin, putative, expressed",3.2416708,null,20.1,"stress.biotic","Os08g0102700","Transcript","weakly similar to ( 158) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.8969364,null,26.1,"misc.cytochrome P450","Os06g0641800","Transcript","moderately similar to ( 268) AT3G26210 | Symbols: CYP71B23 | CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9593329-9595202 REVERSEmoderately similar to ( 336) C71DB_LOTJA Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus p450 CypX protein|cytochrome P450, putative, expressed",1.4135418,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0504500","Transcript","protein|thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed",2.366072,null,"Os03g0189400","alcohol dehydrogenases",-2.0881405,-4.51629,-4.3328733,-1.8213892,-0.9576349,-2.8905191,null,"17.1.1.1.10","hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase","Os02g0704000","Transcript",null,"Os01g0938100","Photosystem II protein Psb28, class 1 domain containing protein.",3.3609285,3.9432192,2.3086567,4.920087,3.3011484,4.5981674]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0869800","Transcript","moderately similar to ( 256) AT1G44575 | Symbols: NPQ4, PSBS | NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding | chr1:16871768-16872548 FORWARDmoderately similar to ( 269) PSBS_TOBAC Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) protein|chlorophyll A-B binding protein, putative, expressed",4.383471,null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0753500","Transcript","moderately similar to ( 450) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.6797137,null,31.3,"cell.cycle","Os04g0563700","Transcript","moderately similar to ( 434) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEmoderately similar to ( 468) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C CYCLIN protein|cyclin, putative, expressed",2.7577922,null,20.1,"stress.biotic","Os07g0106700","Transcript","Dirigent protein|dirigent, putative, expressed",7.312433,null,26.1,"misc.cytochrome P450","Os10g0317900","Transcript","moderately similar to ( 493) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDhighly similar to ( 503) F3PH_PETHY Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",6.3679175,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os07g0544800","Transcript","weakly similar to ( 162) AT4G21280 | Symbols: PSBQ, PSBQA, PSBQ-1 | oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | chr4:11334446-11335587 FORWARDweakly similar to ( 191) PSBQ1_MAIZE Oxygen-evolving enhancer protein 3-1, chloroplast precursor (OEE3) (16 kDa subunit of oxygen evolving system of photosystem II) (OEC 16 kDa subunit) - Zea mays (Maize)PsbQ protein|oxygen evolving enhancer protein 3 domain containing protein, expressed",2.661773,null,"Os01g0860800","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",{"$nulls":3},-1.7981558,-0.78697586,-1.1933603,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os11g0498600","Transcript",null,"Os01g0966200","Protein of unknown function YGGT family protein.",0.73078203,2.3565154,2.3336558,1.7099695,2.3260632,3.457323]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os02g0578400","Transcript","weakly similar to ( 162) AT1G14150 | Symbols: | oxygen evolving enhancer 3 (PsbQ) family protein | chr1:4839885-4840632 FORWARDPsbQ protein|oxygen evolving enhancer protein 3, identical, putative, expressed",6.63686,null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0670800","Transcript","moderately similar to ( 480) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.0322542,null,31.3,"cell.cycle","Os03g0308200","Transcript","highly similar to ( 835) AT5G26850 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cyclin-related (TAIR:AT2G41830.1); Has 199 Blast hits to 197 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 19; Plants - 59; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:9445950-9450584 FORWARD protein|cyclin-related protein, putative, expressed",1.3246378,null,20.1,"stress.biotic","Os06g0691200","Transcript","moderately similar to ( 270) AT1G73620 | Symbols: | thaumatin-like protein, putative / pathogenesis-related protein, putative | chr1:27681432-27682954 FORWARDweakly similar to ( 191) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin family domain containing protein, expressed",2.5318286,null,26.1,"misc.cytochrome P450","Os02g0504000","Transcript","moderately similar to ( 308) AT4G37370 | Symbols: CYP81D8 | CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17569971-17571678 REVERSEmoderately similar to ( 226) C82A3_SOYBN Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",-1.5094649,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0869800","Transcript","moderately similar to ( 256) AT1G44575 | Symbols: NPQ4, PSBS | NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding | chr1:16871768-16872548 FORWARDmoderately similar to ( 269) PSBS_TOBAC Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Nicotiana tabacum (Common tobacco) protein|chlorophyll A-B binding protein, putative, expressed",4.383471,null,"Os04g0573900","cytochrome P450",-1.6245174,-2.5822902,-1.7128744,-1.7531815,-0.9984298,-1.863877,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os04g0527000","Transcript",null,"Os08g0504500","Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich domain containing protein.",2.23738,3.056919,2.6409683,2.1966448,1.7391438,3.162427]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0512500","Transcript","moderately similar to ( 239) AT1G76450 | Symbols: | oxygen-evolving complex-related | chr1:28684618-28686109 FORWARD protein|thylakoid lumen protein, chloroplast precursor, putative, expressed",1.8455633,null,"27.3.5","RNA.regulation of transcription.ARR","Os02g0182100","Transcript","moderately similar to ( 321) AT2G25180 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/ two-component response regulator | chr2:10724490-10726961 REVERSEvery weakly similar to (84.3) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)AtoC REC REC Response_reg OmpR CheY COG4753 protein|two-component response regulator, putative, expressed",-1.0548993,null,31.3,"cell.cycle","Os03g0617500","Transcript","weakly similar to ( 111) AT4G37630 | Symbols: CYCD5;1 | CYCD5;1 (cyclin d5;1); cyclin-dependent protein kinase | chr4:17679497-17680788 FORWARD Cyclin_N protein|cyclin, putative, expressed",2.2747788,null,20.1,"stress.biotic","Os12g0468300","Transcript","weakly similar to ( 102) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3992846,null,26.1,"misc.cytochrome P450","Os02g0601500","Transcript","moderately similar to ( 262) AT3G26310 | Symbols: CYP71B35 | CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9641089-9642779 REVERSEmoderately similar to ( 343) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",-3.1112576,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os02g0578400","Transcript","weakly similar to ( 162) AT1G14150 | Symbols: | oxygen evolving enhancer 3 (PsbQ) family protein | chr1:4839885-4840632 FORWARDPsbQ protein|oxygen evolving enhancer protein 3, identical, putative, expressed",6.63686,null,"Os09g0467200","Glutathione S transferases",-1.239295,-2.395134,-2.0816069,-1.514616,-0.9291668,-1.7333212,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os09g0450600","Transcript",null,"Os03g0592500","OsLhcb2",4.7395535,4.1213446,2.7148561,5.2349224,3.3958302,4.629755]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0805300","Transcript","moderately similar to ( 305) AT3G56650 | Symbols: | thylakoid lumenal 20 kDa protein | chr3:20984807-20985913 FORWARD protein|thylakoid lumenal 20 kDa protein, putative, expressed",3.79061,null,"27.3.5","RNA.regulation of transcription.ARR","Os11g0143300","Transcript","moderately similar to ( 201) AT3G57040 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator | chr3:21110059-21111228 FORWARDREC REC protein|OsRR10 type-A response regulator, expressed",-1.0985559,null,31.3,"cell.cycle","Os09g0466100","Transcript","weakly similar to ( 190) AT5G65420 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | chr5:26141592-26143750 REVERSE Cyclin_N protein|cyclin, putative, expressed",1.4984407,null,20.1,"stress.biotic","Os01g0621900","Transcript","moderately similar to ( 447) AT1G64140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE protein|expressed protein",-1.0719166,null,26.1,"misc.cytochrome P450","Os08g0105800","Transcript","moderately similar to ( 302) AT3G48310 | Symbols: CYP71A22 | CYP71A22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17888192-17889749 FORWARDmoderately similar to ( 476) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",1.3801135,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0512500","Transcript","moderately similar to ( 239) AT1G76450 | Symbols: | oxygen-evolving complex-related | chr1:28684618-28686109 FORWARD protein|thylakoid lumen protein, chloroplast precursor, putative, expressed",1.8455633,null,"Os10g0515200","cytochrome P450",-3.0059843,-4.01649,-3.4629703,-1.497045,-0.7606611,-2.193932,null,"17.3.1.1.1","hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2","Os01g0851600","Transcript",null,"Os06g0664200","Fructose-1,6-bisphosphatase domain containing protein.",2.498084,4.017044,2.862143,4.0806985,2.6667733,4.43483]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os03g0279950","Transcript","weakly similar to ( 136) AT2G39470 | Symbols: PPL2 | PPL2 (PsbP-like protein 2); calcium ion binding | chr2:16476335-16477402 FORWARD protein|PsbP, putative, expressed",3.5594528,null,"27.3.5","RNA.regulation of transcription.ARR","Os04g0442300","Transcript","weakly similar to ( 125) AT1G59940 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator | chr1:22065894-22066895 REVERSEREC REC AtoC Response_reg CheY PleD protein|OsRR1 type-A response regulator, expressed",1.9674207,null,31.3,"cell.cycle","Os06g0726800","Transcript","moderately similar to ( 422) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEhighly similar to ( 808) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C protein|cyclin, putative, expressed",2.0030484,null,20.1,"stress.biotic","Os01g0139000","Transcript","weakly similar to ( 184) AT3G18260 | Symbols: | reticulon family protein (RTNLB9) | chr3:6260328-6261504 REVERSE Reticulon protein|reticulon domain containing protein, putative, expressed",3.424846,null,26.1,"misc.cytochrome P450","Os08g0106300","Transcript","moderately similar to ( 337) AT3G48280 | Symbols: CYP71A25 | CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17879594-17881164 FORWARDhighly similar to ( 541) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",4.8711514,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0805300","Transcript","moderately similar to ( 305) AT3G56650 | Symbols: | thylakoid lumenal 20 kDa protein | chr3:20984807-20985913 FORWARD protein|thylakoid lumenal 20 kDa protein, putative, expressed",3.79061,null,"Os01g0326300","Peroxidases",{"$nulls":3},-1.4192133,-1.905613,-2.3685093,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os02g0113200","Transcript",null,"Os01g0600900","OsLhcb1",4.7805357,4.290697,2.9642773,3.207775,2.9240375,4.4830627]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os10g0461400","Transcript","moderately similar to ( 254) AT3G55330 | Symbols: PPL1 | PPL1 (PsbP-like protein 1); calcium ion binding | chr3:20514031-20515275 REVERSEPsbP protein|PsbP, putative, expressed",2.099097,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0915600","Transcript","weakly similar to ( 178) AT3G07340 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:2341188-2343288 REVERSE protein|BHLH transcription factor, putative, expressed",1.1191101,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os09g0501850","Transcript","moderately similar to ( 206) AT3G25220 | Symbols: FKBP15-1 | FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase | chr3:9182691-9184463 FORWARDweakly similar to ( 195) FKB15_VICFA FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) FKBP_C FkpA PRK11570 PRK10902 protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",-0.9592638,null,20.1,"stress.biotic","Os03g0132900","Transcript","moderately similar to ( 277) AT3G12500 | Symbols: ATHCHIB, PR3, PR-3, CHI-B, B-CHI | ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase | chr3:3962501-3963945 REVERSEmoderately similar to ( 298) CHIA_SECCE Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed chitinase-a) (RSC-a) - Secale cereale (Rye) Glyco_hydro_19 chitinase_glyco_hydro_19 protein|CHIT16 - Chitinase family protein precursor, expressed",-1.4874182,null,26.1,"misc.cytochrome P450","Os08g0106000","Transcript","moderately similar to ( 347) AT3G48280 | Symbols: CYP71A25 | CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17879594-17881164 FORWARDhighly similar to ( 559) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",5.1527634,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os03g0279950","Transcript","weakly similar to ( 136) AT2G39470 | Symbols: PPL2 | PPL2 (PsbP-like protein 2); calcium ion binding | chr2:16476335-16477402 FORWARD protein|PsbP, putative, expressed",3.5594528,null,"Os11g0438700","nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases",1.641849,1.5269008,1.4746184,-1.4011984,-1.6350138,-1.046226,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os05g0211100","Transcript",null,"Os01g0720500","OsLhcb1.1",7.166127,6.2385406,3.1076145,9.021717,7.6112094,8.395962]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0938100","Transcript","weakly similar to ( 191) AT4G28660 | Symbols: PSB28 | PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) | chr4:14150008-14150933 FORWARDpsbW Psb28 protein|photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed",4.273134,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os08g0524800","Transcript","weakly similar to ( 160) AT5G48560 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:19684160-19686871 FORWARD protein|BHLH transcription factor, putative, expressed",1.7823194,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os04g0352400","Transcript","highly similar to ( 688) AT3G25230 | Symbols: ROF1, ATFKBP62, FKBP62 | ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | chr3:9188257-9191175 FORWARDhighly similar to ( 661) FKB70_WHEAT 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) FKBP_C FkpA PRK10902 PRK11570 protein|peptidyl-prolyl isomerase, putative, expressed",-1.4278479,null,20.1,"stress.biotic","Os07g0617100","Transcript","protein|dirigent, putative, expressed",2.6670353,null,26.1,"misc.cytochrome P450","Os08g0152300","Transcript","moderately similar to ( 305) AT1G64940 | Symbols: CYP89A6 | CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:24123789-24125324 FORWARDmoderately similar to ( 219) C77A1_SOLME Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",1.2504189,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os10g0461400","Transcript","moderately similar to ( 254) AT3G55330 | Symbols: PPL1 | PPL1 (PsbP-like protein 1); calcium ion binding | chr3:20514031-20515275 REVERSEPsbP protein|PsbP, putative, expressed",2.099097,null,"Os09g0539200","Gluco-, Galacto- and mannosidases.beta-Galactosidase",{"$nulls":3},-1.3608837,-1.081202,-1.105206,null,"17.3.1.2.6","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7","Os01g0134500","Transcript",null,"Os02g0578400","Photosystem II oxygen evolving complex protein PsbQ family protein.",2.1122322,2.866798,3.2934766,6.006985,6.4215455,7.4820485]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os03g0333400","Transcript","weakly similar to ( 154) AT1G03600 | Symbols: | photosystem II family protein | chr1:898916-899440 FORWARD protein|photosystem II 11 kD protein, putative, expressed",4.14127,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0135700","Transcript","weakly similar to ( 199) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|BHLH transcription factor, putative, expressed",2.1326425,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os06g0708500","Transcript","moderately similar to ( 295) AT5G58710 | Symbols: ROC7 | ROC7; peptidyl-prolyl cis-trans isomerase | chr5:23717840-23719495 FORWARDmoderately similar to ( 217) CYPH_CATRO Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_SpCYP2_like cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_CeCYP16-like cyclophilin_RRM protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",-1.2119535,null,20.1,"stress.biotic","Os10g0370400","Transcript","very weakly similar to (91.3) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",-1.0561796,null,26.1,"misc.cytochrome P450","Os06g0294600","Transcript","moderately similar to ( 284) AT2G45570 | Symbols: CYP76C2 | CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18779935-18781922 REVERSEmoderately similar to ( 224) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.8447745,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os01g0938100","Transcript","weakly similar to ( 191) AT4G28660 | Symbols: PSB28 | PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) | chr4:14150008-14150933 FORWARDpsbW Psb28 protein|photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed",4.273134,null,"Os09g0511700","Gluco-, Galacto- and mannosidases",-2.1460938,-3.083674,-2.480795,-1.3095689,-1.4228339,-1.5053754,null,"17.3.1.2.7","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5","Os02g0465400","Transcript",null,"Os02g0197600","Chlorophyll a/b-binding protein type III (Fragment).",4.5432673,5.6434793,3.830164,4.170808,3.4282112,4.0713425]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0347500","Transcript","moderately similar to ( 261) AT3G55330 | Symbols: PPL1 | PPL1 (PsbP-like protein 1); calcium ion binding | chr3:20514031-20515275 REVERSEPsbP protein|PsbP, putative, expressed",1.7727855,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0691500","Transcript","weakly similar to ( 182) AT1G72210 | Symbols: | basic helix-loop-helix (bHLH) family protein (bHLH096) | chr1:27180066-27182268 FORWARD protein|helix-loop-helix DNA-binding protein, putative, expressed",3.364888,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os01g0111100","Transcript","moderately similar to ( 246) AT1G74070 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr1:27851749-27852861 REVERSE cyclophilin Pro_isomerase cyclophilin_ABH_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",4.180256,null,20.1,"stress.biotic","Os02g0199200","Transcript","NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.2066263,null,26.1,"misc.cytochrome P450","Os04g0573900","Transcript","moderately similar to ( 357) AT2G44890 | Symbols: CYP704A1 | CYP704A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18508392-18510290 REVERSEvery weakly similar to (80.1) C97B1_PEA Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) p450 CypX protein|cytochrome P450, putative, expressed",-1.538496,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os03g0333400","Transcript","weakly similar to ( 154) AT1G03600 | Symbols: | photosystem II family protein | chr1:898916-899440 FORWARD protein|photosystem II 11 kD protein, putative, expressed",4.14127,null,"Os04g0359700","oxidases - copper, flavone etc.",{"$nulls":3},-1.3071151,-1.8886657,-1.9426932,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os02g0280700","Transcript",null,"Os01g0905800","Aldolase C-1.",2.157549,4.245139,4.2943716,-0.45378876,-1.0748482,-1.4006462]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os05g0292800","Transcript","weakly similar to ( 118) AT5G02120 | Symbols: OHP | OHP (ONE HELIX PROTEIN) | chr5:419144-419633 FORWARD protein|expressed protein",3.3741837,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0952800","Transcript","weakly similar to ( 111) AT3G56970 | Symbols: BHLH038, ORG2 | BHLH038; DNA binding / transcription factor | chr3:21084204-21085094 REVERSE protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.7507919,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os07g0565600","Transcript","highly similar to ( 521) AT3G15520 | Symbols: | peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase | chr3:5249739-5252432 REVERSEweakly similar to ( 131) TLP40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach)cyclophilin_TLP40_like protein|peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed",1.9124368,null,20.1,"stress.biotic","Os06g0514800","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION9 - Plant thionin family protein precursor, expressed",-1.6636208,null,26.1,"misc.cytochrome P450","Os07g0517900","Transcript","weakly similar to ( 189) AT5G36110 | Symbols: CYP716A1 | CYP716A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:14195377-14197613 FORWARDweakly similar to ( 138) C85A_PHAVU Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) CypX p450 protein|hydroxylase, putative, expressed",2.2067585,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os08g0347500","Transcript","moderately similar to ( 261) AT3G55330 | Symbols: PPL1 | PPL1 (PsbP-like protein 1); calcium ion binding | chr3:20514031-20515275 REVERSEPsbP protein|PsbP, putative, expressed",1.7727855,null,"Os05g0424300","cytochrome P450",-2.648057,-2.9331145,-3.3823605,-1.3006911,-1.1354785,-2.029077,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os08g0390200","Transcript",null,"Os04g0412200","Ferredoxin I.",1.7856946,3.9387703,5.0549774,2.3568635,2.1608777,3.8777585]
[null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os12g0480100","Transcript","weakly similar to ( 103) AT5G02120 | Symbols: OHP | OHP (ONE HELIX PROTEIN) | chr5:419144-419633 FORWARD protein|expressed protein",1.8358403,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os09g0510500","Transcript","weakly similar to ( 126) AT5G50915 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:20710764-20712252 REVERSE protein|BEE 1, putative, expressed",3.5891144,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os05g0103200","Transcript","moderately similar to ( 293) AT5G13120 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr5:4162714-4164720 REVERSEmoderately similar to ( 221) CYPB_VICFA Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_SpCYP2_like cyclophilin_CeCYP16-like cyclophilin_RRM cyclophilin_EcCYP_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",2.154865,null,20.1,"stress.biotic","Os11g0226700","Transcript","weakly similar to ( 136) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|MLA10, putative, expressed",-1.1133829,null,26.1,"misc.cytochrome P450","Os12g0119000","Transcript","moderately similar to ( 445) AT5G24910 | Symbols: CYP714A1 | CYP714A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8567674-8570260 REVERSEmoderately similar to ( 255) C72A1_CATRO Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) p450 CypX protein|cytochrome P450 72A1, putative, expressed",2.4901547,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os05g0292800","Transcript","weakly similar to ( 118) AT5G02120 | Symbols: OHP | OHP (ONE HELIX PROTEIN) | chr5:419144-419633 FORWARD protein|expressed protein",3.3741837,null,"Os02g0185300","cytochrome P450",-1.1120172,-1.9432917,-1.0581875,-1.2619243,-0.67050934,-1.4683733,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0690500","Transcript",null,"Os01g0841600","OscTPI",0,0,0,-1.4312534,-1.1591349,-1.8774128]
[null,"1.1.2.1","PS.lightreaction.photosystem I.LHC-I","Os01g0589800","Transcript","weakly similar to ( 134) AT1G34000 | Symbols: OHP2 | OHP2 (ONE-HELIX PROTEIN 2) | chr1:12358151-12358902 REVERSE protein|high light inducible protein, putative, expressed",1.9516014,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os07g0549600","Transcript","very weakly similar to (87.0) AT2G16910 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding / transcription factor | chr2:7331721-7334077 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",1.4914767,{"$nulls":8},20.1,"stress.biotic","Os06g0513050","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION3 - Plant thionin family protein precursor, expressed",-1.6636208,null,26.1,"misc.cytochrome P450","Os03g0112900","Transcript","moderately similar to ( 473) AT4G36220 | Symbols: FAH1, CYP84A1 | FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase | chr4:17137584-17139619 REVERSEmoderately similar to ( 263) F3PH_PETHY Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",1.2192672,null,"1.1.1.2","PS.lightreaction.photosystem II.PSII polypeptide subunits","Os12g0480100","Transcript","weakly similar to ( 103) AT5G02120 | Symbols: OHP | OHP (ONE HELIX PROTEIN) | chr5:419144-419633 FORWARD protein|expressed protein",1.8358403,null,"Os02g0207100","UDP glucosyl and glucoronyl transferases",{"$nulls":3},-1.2509303,-0.8236308,-1.39505,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os01g0352100","Transcript",null,"Os03g0213200","Hypothetical conserved gene.",0,0,0,-0.6890321,-0.88958883,-1.4943976]
[null,"1.1.2.1","PS.lightreaction.photosystem I.LHC-I","Os02g0197600","Transcript","moderately similar to ( 296) AT1G61520 | Symbols: LHCA3 | LHCA3; chlorophyll binding | chr1:22700493-22701149 FORWARDweakly similar to ( 109) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.8901205,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os05g0139100","Transcript","weakly similar to ( 113) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",2.685197,null,28.2,"DNA.repair","Os01g0578000","Transcript","moderately similar to ( 325) AT2G45280 | Symbols: ATRAD51C, RAD51C | ATRAD51C; ATP binding / damaged DNA binding / protein binding / recombinase/ single-stranded DNA binding | chr2:18670103-18672041 FORWARDvery weakly similar to (82.4) DMC1_SOYBN Meiotic recombination protein DMC1 homolog - Glycine max (Soybean) Rad51_DMC1_radA recA_like radA Rad51 RecA radB protein|DNA repair protein Rad51, putative, expressed",1.4502782,null,20.1,"stress.biotic","Os02g0102800","Transcript","highly similar to ( 907) AT4G19040 | Symbols: EDR2 | EDR2; lipid binding | chr4:10431799-10437171 REVERSEDUF1336 START START START protein|START domain containing protein, expressed",2.264417,null,26.1,"misc.cytochrome P450","Os02g0817900","Transcript","highly similar to ( 784) AT1G31800 | Symbols: CYP97A3, LUT5 | CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3); carotene beta-ring hydroxylase/ oxygen binding | chr1:11396440-11399470 FORWARDmoderately similar to ( 449) C97B2_SOYBN Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.516514,{"$nulls":8},"Os02g0504000","cytochrome P450",{"$nulls":3},-1.2469511,-1.7506404,-1.5308032,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0439500","Transcript",null,"Os02g0169300","OsPGK2",0,0,0,-0.68586063,-0.98390865,-1.2939968]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os09g0481200","Transcript","weakly similar to ( 169) AT1G55670 | Symbols: PSAG | PSAG (PHOTOSYSTEM I SUBUNIT G) | chr1:20802874-20803356 REVERSEweakly similar to ( 189) PSAG_HORVU Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Hordeum vulgare (Barley)PSI_PSAK protein|photosystem I reaction center subunit, chloroplast precursor, putative, expressed",2.096794,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0603600","Transcript","weakly similar to ( 151) AT1G05805 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr1:1744843-1747427 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.372179,null,28.2,"DNA.repair","Os06g0661800","Transcript","highly similar to ( 697) AT5G24850 | Symbols: CRY3 | CRY3 (cryptochrome 3); DNA binding / DNA photolyase/ FMN binding | chr5:8535399-8538016 REVERSEnearly identical (1083) CRYD_ORYSA Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) PhrB FAD_binding_7 PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",1.7923781,null,20.1,"stress.biotic","Os10g0491000","Transcript","weakly similar to ( 172) AT2G15220 | Symbols: | secretory protein, putative | chr2:6608689-6609366 FORWARDBSP protein|secretory protein, putative, expressed",-1.8751928,null,26.1,"misc.cytochrome P450","Os06g0640800","Transcript","moderately similar to ( 291) AT5G24950 | Symbols: CYP71A15 | CYP71A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8595209-8597761 REVERSEmoderately similar to ( 348) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.0970457,null,"1.1.4.4","PS.lightreaction.ATP synthase.gamma chain","Os07g0513000","Transcript","moderately similar to ( 461) AT4G04640 | Symbols: ATPC1 | ATPC1; enzyme regulator | chr4:2350761-2351882 REVERSEhighly similar to ( 540) ATPG_MAIZE ATP synthase subunit gamma, chloroplast precursor (EC 3.6.3.14) [Contains: Inceptin] - Zea mays (Maize) ATP-synt PRK05621 AtpG protein|ATP synthase gamma chain, putative, expressed",3.178107,null,"Os12g0226700","oxidases - copper, flavone etc.",{"$nulls":3},-1.1889191,-0.9680872,-1.6488609,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0451000","Transcript",null,"Os04g0107300","NADP-binding domain containing protein.",0,0,0,0.87082577,0.96112394,2.0971875]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os10g0536500","Transcript","weakly similar to ( 113) AT2G46820 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870 FORWARD protein|expressed protein",6.3376794,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0782500","Transcript","weakly similar to ( 104) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|phytochrome-interacting factor 4, putative, expressed",1.688983,null,28.2,"DNA.repair","Os01g0757800","Transcript","highly similar to ( 618) AT5G44740 | Symbols: POLH | POLH (Y-FAMILT DNA POLYMERASE H); DNA-directed DNA polymerase | chr5:18047903-18051779 REVERSE Pol_eta IMS Pol_IV_kappa DinP PRK02406 Pol_iota Pol_Y Pol_zeta PRK03348 PRK01810 PRK03858 PRK01216 PRK02794 PRK03352 PRK03103 protein|DNA-directed polymerase, putative, expressed",1.2776455,null,20.1,"stress.biotic","Os06g0702700","Transcript","weakly similar to ( 181) AT2G24390 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related (TAIR:AT4G31310.1); Has 167 Blast hits to 167 proteins in 49 species: Archae - 12; Bacteria - 32; Metazoa - 0; Fungi - 33; Plants - 61; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | chr2:10373796-10374654 FORWARD protein|AIG2-like family domain containing protein, expressed",-1.2020655,null,26.1,"misc.cytochrome P450","Os04g0469800","Transcript","moderately similar to ( 243) AT3G50660 | Symbols: DWF4, CYP90B1, CLM, SNP2, SAV1 | DWF4 (DWARF 4); steroid 22-alpha hydroxylase | chr3:18814262-18817168 REVERSEhighly similar to ( 642) C724B_ORYSA Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) CypX p450 protein|cytochrome P450, putative, expressed",2.068486,null,"1.1.4.7","PS.lightreaction.ATP synthase.delta chain","Os02g0750200","Transcript","weakly similar to ( 164) AT4G09650 | Symbols: ATPD | ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE); hydrogen ion transporting ATP synthase, rotational mechanism / proton-transporting ATPase, rotational mechanism | chr4:6100799-6101503 FORWARDmoderately similar to ( 237) ATPD_SORBI ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Sorghum bicolor (Sorghum) (Sorghum vulgare) OSCP AtpH PRK05758 atpD protein|ATP synthase F1, delta subunit family protein, putative, expressed",3.2944186,null,"Os04g0671200","oxidases - copper, flavone etc.",{"$nulls":3},-1.1133614,-1.1406031,-1.6005478,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0248900","Transcript",null,"Os04g0106400","NADP-binding domain containing protein.",0,0,0,1.4629288,0.7552209,1.8871326]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os07g0148900","Transcript","weakly similar to ( 137) AT1G30380 | Symbols: PSAK | PSAK (photosystem I subunit K) | chr1:10722325-10723013 FORWARDweakly similar to ( 166) PSAK_HORVU Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) (Light-harvesting complex I 7 kDa protein) - Hordeum vulgare (Barley)PSI_PSAK protein|photosystem I reaction center subunit, chloroplast precursor, putative, expressed",3.1698763,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os10g0544200","Transcript","weakly similar to ( 172) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|inducer of CBF expression 2, putative, expressed",3.7744904,null,28.2,"DNA.repair","Os06g0151800","Transcript","highly similar to ( 569) AT5G50340 | Symbols: | ATP binding / damaged DNA binding / nucleoside-triphosphatase/ nucleotide binding | chr5:20491635-20495830 REVERSEPRK11823 Sms Sms protein|OsLonP2 - Putative Lon protease homologue, expressed",-1.3040417,null,20.1,"stress.biotic","Os02g0538700","Transcript","weakly similar to ( 169) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",5.4522204,null,26.1,"misc.cytochrome P450","Os06g0102100","Transcript","moderately similar to ( 321) AT5G06900 | Symbols: CYP93D1 | CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:2136160-2137925 REVERSEmoderately similar to ( 397) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",6.396172,null,"1.1.4.9","PS.lightreaction.ATP synthase.subunit B_ (ATPX)","Os03g0278900","Transcript","weakly similar to ( 120) AT4G32260 | Symbols: | ATP synthase family | chr4:15573859-15574586 REVERSEweakly similar to ( 129) ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach)atpG protein|ATP synthase B chain, chloroplast precursor, putative, expressed",2.0190065,null,"Os04g0556500","UDP glucosyl and glucoronyl transferases",-1.0685282,-1.9341269,-1.8504639,-1.0807066,-1.4356766,-1.8478336,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os07g0227600","Transcript",null,"Os03g0786100","OsGLO1",0,0,0,2.1073618,1.051321,1.4013481]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os03g0778100","Transcript","moderately similar to ( 253) AT1G31330 | Symbols: PSAF | PSAF (photosystem I subunit F) | chr1:11215011-11215939 REVERSEmoderately similar to ( 284) PSAF_HORVU Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Hordeum vulgare (Barley)PSI_PsaF psaF protein|photosystem I reaction center subunit III, chloroplast precursor, putative, expressed",2.3129609,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0731700","Transcript","weakly similar to ( 173) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.7829956,null,28.2,"DNA.repair","Os05g0498300","Transcript","moderately similar to ( 412) AT3G20475 | Symbols: ATMSH5, MSH5 | MSH5 (MUTS-HOMOLOGUE 5); ATP binding / damaged DNA binding / mismatched DNA binding | chr3:7143546-7150811 FORWARD ABC_MSH5_euk PRK05399 ABC_MutS1 MutS MutS_V MUTSac ABC_MutS_homologs ABC_MSH2_euk ABC_MSH3_euk protein|mutS domain V family protein, expressed",2.3783703,null,20.1,"stress.biotic","Os02g0605900","Transcript","moderately similar to ( 322) AT3G54420 | Symbols: ATEP3, ATCHITIV, CHIV | ATEP3; chitinase | chr3:20145935-20147034 FORWARDmoderately similar to ( 298) CHI4_PHAVU Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT1 - Chitinase family protein precursor, expressed",-1.6030992,null,26.1,"misc.cytochrome P450","Os01g0544200","Transcript","weakly similar to ( 121) AT3G48270 | Symbols: CYP71A26 | CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17876571-17878173 FORWARDweakly similar to ( 150) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) protein|cytochrome P450, putative, expressed",1.9907635,{"$nulls":8},"Os01g0720400","acid and other phosphatases",{"$nulls":3},-1.0067749,-1.8218126,-1.2261744,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os10g0450000","Transcript",null,"Os05g0555300","Ferredoxin I",0,0,0,2.3855023,0.81662273,2.0116143]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os05g0242400","Transcript","protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.0872772,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0536300","Transcript","very weakly similar to (94.4) AT2G33500 | Symbols: | zinc finger (B-box type) family protein | chr2:14188159-14190046 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.903288,null,28.2,"DNA.repair","Os01g0858000","Transcript","moderately similar to ( 338) AT1G19485 | Symbols: | AT hook motif-containing protein | chr1:6747167-6751443 FORWARD protein|AT hook motif family protein, expressed",-1.3340768,null,20.1,"stress.biotic","Os03g0243900","Transcript","moderately similar to ( 266) AT4G38660 | Symbols: | thaumatin, putative | chr4:18066448-18067792 REVERSEmoderately similar to ( 210) TLP1_PRUPE Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach)THN Thaumatin protein|thaumatin, putative, expressed",5.939701,null,26.1,"misc.cytochrome P450","Os02g0503100","Transcript","moderately similar to ( 357) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 342) C75A1_PETHY Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",1.8331159,null,"1.1.3","PS.lightreaction.cytochrome b6/f","Os01g0966200","Transcript","weakly similar to ( 166) AT5G36120 | Symbols: CCB3 | CCB3 (COFACTOR ASSEMBLY, COMPLEX C (B6F),) | chr5:14198679-14199203 REVERSE protein|YGGT family protein, putative, expressed",2.4977853,null,"Os01g0650200","GDSL-motif lipase",{"$nulls":3},-0.9355421,-1.0644884,-2.0120664,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0163200","Transcript",null,"Os12g0480100","One helix protein (OHP).",0,0,0,2.1062145,1.1783028,2.2230039]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os12g0420400","Transcript","moderately similar to ( 240) AT4G12800 | Symbols: PSAL | PSAL (photosystem I subunit L) | chr4:7521469-7522493 FORWARDmoderately similar to ( 316) PSAL_HORVU Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Hordeum vulgare (Barley)PsaL psaL PRK00704 protein|photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed",2.9661806,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0148000","Transcript","weakly similar to ( 115) AT5G57180 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator | chr5:23168393-23169523 FORWARD protein|CCT motif family protein, expressed",6.6167235,null,28.2,"DNA.repair","Os04g0501200","Transcript","moderately similar to ( 308) AT5G57970 | Symbols: | methyladenine glycosylase family protein | chr5:23467316-23468910 FORWARDAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",1.3783137,null,20.1,"stress.biotic","Os12g0159600","Transcript","weakly similar to ( 183) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.0807091,{"$nulls":8},"1.1.3.1","PS.lightreaction.cytochrome b6/f.iron sulfur subunit","Os07g0556200","Transcript","moderately similar to ( 285) AT4G03280 | Symbols: PETC, PGR1 | PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II | chr4:1440462-1441717 FORWARDmoderately similar to ( 453) UCRIA_ORYSA Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Oryza sativa (Rice) Rieske_cytochrome_b6f QcrA protein|cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed",2.058778,null,"Os01g0739700","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",{"$nulls":3},-0.92479897,-0.8170495,-1.4319696,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0183200","Transcript",null,"Os08g0512500","Thylakoid lumen protein, chloroplast.",0,0,0,1.9263239,1.4301443,2.1802216]
[null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os12g0189400","Transcript","weakly similar to ( 156) AT5G64040 | Symbols: PSAN | PSAN; calmodulin binding | chr5:25628690-25629409 REVERSEweakly similar to ( 166) PSAN_HORVU Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) - Hordeum vulgare (Barley)PsaN protein|photosystem I reaction center subunit N, chloroplast precursor, putative, expressed",2.3794901,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0428400","Transcript","protein|ZIM motif family protein, expressed",1.5630218,null,28.2,"DNA.repair","Os09g0407200","Transcript","moderately similar to ( 339) AT5G38470 | Symbols: | DNA repair protein RAD23, putative | chr5:15404720-15407251 FORWARDhighly similar to ( 535) RAD23_ORYSA Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) RAD23_N protein|RAD23 DNA repair protein, putative, expressed",-1.1518512,null,20.1,"stress.biotic","Os10g0105933","Transcript","moderately similar to ( 220) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 106) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.1420423,null,26.7,"misc.oxidases - copper, flavone etc.","Os06g0286310","Transcript","moderately similar to ( 297) AT2G22260 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr2:9461342-9463053 FORWARD protein|oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed",1.5338697,{"$nulls":8},"Os04g0412300","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",{"$nulls":3},-0.9146681,-1.5250216,-1.6160383,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os09g0304500","Transcript",null,"Os01g0589800","OHP2.",0,0,0,2.1780272,1.2333994,2.4433775]
[null,"1.1.3","PS.lightreaction.cytochrome b6/f","Os01g0966200","Transcript","weakly similar to ( 166) AT5G36120 | Symbols: CCB3 | CCB3 (COFACTOR ASSEMBLY, COMPLEX C (B6F),) | chr5:14198679-14199203 REVERSE protein|YGGT family protein, putative, expressed",2.4977853,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613,null,28.2,"DNA.repair","Os06g0237900","Transcript","moderately similar to ( 264) AT3G47830 | Symbols: | HhH-GPD base excision DNA repair protein-related | chr3:17647069-17648346 FORWARDNth ENDO3c ENDO3c HhH-GPD protein|hhH-GPD superfamily base excision DNA repair protein, putative, expressed",1.76937,null,20.1,"stress.biotic","Os08g0375400","Transcript","very weakly similar to (81.3) AT1G22900 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: disease resistance-responsive family protein (TAIR:AT5G42500.1); Has 560 Blast hits to 559 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8103910-8104491 REVERSEDirigent protein|dirigent, putative, expressed",4.7085958,null,26.7,"misc.oxidases - copper, flavone etc.","Os12g0226700","Transcript","moderately similar to ( 391) AT3G03080 | Symbols: | NADP-dependent oxidoreductase, putative | chr3:698530-700278 REVERSE COG2130 Qor protein|NADP-dependent oxidoreductase, putative, expressed",-1.2686224,null,"1.1.2.1","PS.lightreaction.photosystem I.LHC-I","Os01g0589800","Transcript","weakly similar to ( 134) AT1G34000 | Symbols: OHP2 | OHP2 (ONE-HELIX PROTEIN 2) | chr1:12358151-12358902 REVERSE protein|high light inducible protein, putative, expressed",1.9516014,null,"Os04g0636100","UDP glucosyl and glucoronyl transferases",-0.75144005,-2.2191544,-1.6298056,-0.9022198,-0.94316196,-1.2785983,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0310600","Transcript",null,"Os03g0278900","ATPase, F0 complex, subunit B/B', bacterial and chloroplast family protein.",0,0,0,1.9669161,1.5916643,2.4984388]
[null,"1.1.3.1","PS.lightreaction.cytochrome b6/f.iron sulfur subunit","Os07g0556200","Transcript","moderately similar to ( 285) AT4G03280 | Symbols: PETC, PGR1 | PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II | chr4:1440462-1441717 FORWARDmoderately similar to ( 453) UCRIA_ORYSA Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Oryza sativa (Rice) Rieske_cytochrome_b6f QcrA protein|cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed",2.058778,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0264200","Transcript","weakly similar to ( 191) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",2.6492913,null,28.2,"DNA.repair","Os06g0354700","Transcript","highly similar to ( 535) AT5G13800 | Symbols: | hydrolase, alpha/beta fold family protein | chr5:4452063-4454141 REVERSE MhpC protein|hydrolase, alpha/beta fold family domain containing protein, expressed",-1.1361288,null,20.1,"stress.biotic","Os11g0654100","Transcript","weakly similar to ( 108) AT3G50950 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr3:18936127-18938685 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",5.4555035,null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0269600","Transcript","weakly similar to ( 198) AT4G12290 | Symbols: | amine oxidase/ copper ion binding / quinone binding | chr4:7304434-7306973 FORWARDvery weakly similar to (90.9) AMO_PEA Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) tynA Cu_amine_oxidN3 TynA protein|amine oxidase precursor, putative, expressed",2.4455447,null,"1.1.2.1","PS.lightreaction.photosystem I.LHC-I","Os02g0197600","Transcript","moderately similar to ( 296) AT1G61520 | Symbols: LHCA3 | LHCA3; chlorophyll binding | chr1:22700493-22701149 FORWARDweakly similar to ( 109) CB12_PETHY Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia)Chloroa_b-bind protein|chlorophyll A-B binding protein, putative, expressed",3.8901205,null,"Os12g0123200","Glutathione S transferases",-1.1202703,-2.159521,-1.9942546,-0.8994584,-0.5690141,-1.5092463,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0198500","Transcript",null,"Os07g0556200","Rieske [2Fe-2S] region domain containing protein.",0,0,0,2.4778986,1.2515755,2.4468603]
[null,"1.1.4.4","PS.lightreaction.ATP synthase.gamma chain","Os07g0513000","Transcript","moderately similar to ( 461) AT4G04640 | Symbols: ATPC1 | ATPC1; enzyme regulator | chr4:2350761-2351882 REVERSEhighly similar to ( 540) ATPG_MAIZE ATP synthase subunit gamma, chloroplast precursor (EC 3.6.3.14) [Contains: Inceptin] - Zea mays (Maize) ATP-synt PRK05621 AtpG protein|ATP synthase gamma chain, putative, expressed",3.178107,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0713000","Transcript","weakly similar to ( 137) AT1G75540 | Symbols: STH2 | STH2 (SALT TOLERANCE HOMOLOG2); transcription factor/ zinc ion binding | chr1:28366059-28367398 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7561938,null,28.2,"DNA.repair","Os06g0649800","Transcript","moderately similar to ( 334) AT5G57970 | Symbols: | methyladenine glycosylase family protein | chr5:23467316-23468910 FORWARDAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",2.2182589,null,20.1,"stress.biotic","Os08g0190300","Transcript","weakly similar to ( 152) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",2.215337,null,26.7,"misc.oxidases - copper, flavone etc.","Os07g0112000","Transcript","moderately similar to ( 482) AT5G61290 | Symbols: | flavin-containing monooxygenase family protein / FMO family protein | chr5:24648599-24650647 FORWARD FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",1.3904988,{"$nulls":8},"Os01g0176200","UDP glucosyl and glucoronyl transferases",-0.96795225,-2.6527452,-3.0116858,-0.8408003,-1.5862055,-1.712831,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os11g0543300","Transcript",null,"Os09g0481200","OsPSAG",0,0,0,2.7316875,1.3314838,2.22721]
[null,"1.1.4.7","PS.lightreaction.ATP synthase.delta chain","Os02g0750200","Transcript","weakly similar to ( 164) AT4G09650 | Symbols: ATPD | ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE); hydrogen ion transporting ATP synthase, rotational mechanism / proton-transporting ATPase, rotational mechanism | chr4:6100799-6101503 FORWARDmoderately similar to ( 237) ATPD_SORBI ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Sorghum bicolor (Sorghum) (Sorghum vulgare) OSCP AtpH PRK05758 atpD protein|ATP synthase F1, delta subunit family protein, putative, expressed",3.2944186,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os03g0711100","Transcript","weakly similar to ( 135) AT1G73870 | Symbols: | zinc finger (B-box type) family protein | chr1:27779214-27780522 FORWARD protein|CCT/B-box zinc finger protein, putative, expressed",2.263133,null,28.2,"DNA.repair","Os01g0799500","Transcript","moderately similar to ( 298) AT5G44680 | Symbols: | methyladenine glycosylase family protein | chr5:18024461-18025893 REVERSEAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",3.920471,null,20.1,"stress.biotic","Os01g0350000","Transcript","moderately similar to ( 307) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 154) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.5405397,null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0359700","Transcript","moderately similar to ( 323) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 321) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",-1.7128247,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os09g0481200","Transcript","weakly similar to ( 169) AT1G55670 | Symbols: PSAG | PSAG (PHOTOSYSTEM I SUBUNIT G) | chr1:20802874-20803356 REVERSEweakly similar to ( 189) PSAG_HORVU Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Hordeum vulgare (Barley)PSI_PSAK protein|photosystem I reaction center subunit, chloroplast precursor, putative, expressed",2.096794,null,"Os01g0215500","GDSL-motif lipase",{"$nulls":3},-0.78385544,-1.0988326,-1.647058,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os02g0558700","Transcript",null,"Os06g0107700","OsLFNR2",0,0,0,2.7838707,1.1724253,2.467123]
[null,"1.1.4.9","PS.lightreaction.ATP synthase.subunit B_ (ATPX)","Os03g0278900","Transcript","weakly similar to ( 120) AT4G32260 | Symbols: | ATP synthase family | chr4:15573859-15574586 REVERSEweakly similar to ( 129) ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (EC 3.6.3.14) (Subunit II) - Spinacia oleracea (Spinach)atpG protein|ATP synthase B chain, chloroplast precursor, putative, expressed",2.0190065,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os05g0204600","Transcript","weakly similar to ( 140) AT1G78600 | Symbols: LZF1, STH3 | LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding | chr1:29567370-29568662 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7392745,null,28.2,"DNA.repair","Os09g0104200","Transcript","very weakly similar to (88.6) AT1G07745 | Symbols: ATRAD51D, RAD51D, SSN1 | RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D); ATP binding / DNA binding / DNA-dependent ATPase | chr1:2400797-2402492 REVERSERad51_DMC1_radA recA_like protein|DNA repair protein RAD51 homolog 4, putative, expressed",1.1544582,null,20.1,"stress.biotic","Os08g0522500","Transcript","moderately similar to ( 428) AT1G05850 | Symbols: POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1 | POM1 (POM-POM1); chitinase | chr1:1766833-1768117 REVERSEmoderately similar to ( 207) CHI2_BRANA Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT12 - Chitinase family protein precursor, expressed",1.569142,null,26.7,"misc.oxidases - copper, flavone etc.","Os12g0597400","Transcript","moderately similar to ( 485) AT3G04650 | Symbols: | oxidoreductase | chr3:1262017-1264343 FORWARDCOG3380 protein|FAD dependent oxidoreductase, putative, expressed",1.320716,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os10g0536500","Transcript","weakly similar to ( 113) AT2G46820 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870 FORWARD protein|expressed protein",6.3376794,null,"Os10g0413500","oxidases - copper, flavone etc.",-1.6524982,-1.5987473,-1.5034294,-0.6521106,-1.1428075,-1.5771508,null,"17.7.1.3","hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase","Os02g0110200","Transcript",null,"Os03g0738400","OsSHM1",0,0,0,2.411273,2.1327443,2.2089076]
[null,"1.1.5","PS.lightreaction.other electron carrier (ox/red)","Os07g0567400","Transcript","weakly similar to ( 167) AT5G45040 | Symbols: | cytochrome c6 (ATC6) | chr5:18175566-18176851 REVERSE protein|cytochrome c, putative, expressed",5.170736,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os03g0764900","Transcript","weakly similar to ( 110) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDvery weakly similar to (95.5) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-2.1698039,{"$nulls":8},"20.1.1","stress.biotic.respiratory burst","Os12g0541300","Transcript","highly similar to ( 973) AT5G51060 | Symbols: RHD2, ATRBOHC, RBOHC | RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase | chr5:20757484-20762175 REVERSE NAD_binding_6 NADPH_Ox FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",2.361488,null,26.7,"misc.oxidases - copper, flavone etc.","Os03g0784000","Transcript","moderately similar to ( 373) AT1G56000 | Symbols: | amine oxidase-related | chr1:20944149-20946101 FORWARDCOG3380 protein|amine oxidase-related, putative, expressed",1.9066623,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os07g0148900","Transcript","weakly similar to ( 137) AT1G30380 | Symbols: PSAK | PSAK (photosystem I subunit K) | chr1:10722325-10723013 FORWARDweakly similar to ( 166) PSAK_HORVU Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) (Light-harvesting complex I 7 kDa protein) - Hordeum vulgare (Barley)PSI_PSAK protein|photosystem I reaction center subunit, chloroplast precursor, putative, expressed",3.1698763,null,"Os04g0372700","oxidases - copper, flavone etc.",-1.5288262,-1.7673993,-2.6621842,-0.65027905,-1.7384567,-1.0702543,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os01g0701700","Transcript",null,"Os03g0778100","OsPS1-F",0,0,0,3.1357365,1.2307758,2.5723705]
[null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os05g0555300","Transcript","weakly similar to ( 169) AT4G32590 | Symbols: | ferredoxin-related | chr4:15721417-15722781 FORWARD protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",1.7379131,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0673700","Transcript","weakly similar to ( 145) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 118) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975,null,28.1,"DNA.synthesis/chromatin structure","Os03g0238300","Transcript","moderately similar to ( 370) AT2G01900 | Symbols: | endonuclease/exonuclease/phosphatase family protein | chr2:406136-408933 FORWARD IPPc COG5411 Exo_endo_phos protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed",-1.3839077,null,"20.1.1","stress.biotic.respiratory burst","Os01g0360200","Transcript","highly similar to ( 981) AT5G47910 | Symbols: RBOHD, ATRBOHD | RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | chr5:19397585-19401768 FORWARD NADPH_Ox NAD_binding_6 FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",3.1213465,null,26.7,"misc.oxidases - copper, flavone etc.","Os07g0510900","Transcript","highly similar to ( 747) AT1G76160 | Symbols: sks5 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase | chr1:28578211-28581020 REVERSEhighly similar to ( 545) ASO_BRANA L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 SufI protein|monocopper oxidase, putative, expressed",2.8992894,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os03g0778100","Transcript","moderately similar to ( 253) AT1G31330 | Symbols: PSAF | PSAF (photosystem I subunit F) | chr1:11215011-11215939 REVERSEmoderately similar to ( 284) PSAF_HORVU Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Hordeum vulgare (Barley)PSI_PsaF psaF protein|photosystem I reaction center subunit III, chloroplast precursor, putative, expressed",2.3129609,null,"Os11g0210300","alcohol dehydrogenases",1.5532627,2.9359055,2.681881,-0.5560112,-1.0403233,-1.5293689,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os07g0513200","Transcript",null,"Os12g0189400","OspsaN",0,0,0,3.2309122,1.4463167,2.4612417]
[null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os07g0489800","Transcript","weakly similar to ( 160) AT3G16250 | Symbols: NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding | chr3:5507091-5508320 REVERSE protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",2.4911735,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os04g0567800","Transcript","weakly similar to ( 143) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 117) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975,null,28.1,"DNA.synthesis/chromatin structure","Os07g0647900","Transcript","highly similar to ( 593) AT3G09720 | Symbols: | DEAD/DEAH box helicase, putative | chr3:2980483-2983268 REVERSEweakly similar to ( 194) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 PRK11192 PRK01297 PRK04837 DEADc PRK11634 PRK04537 DEAD DEXDc HELICc RecQ Lhr DEXDc COG1205 HELICc Helicase_C COG1204 protein|DEAD/DEAH box helicase domain containing protein, expressed",-1.075765,null,"20.1.7","stress.biotic.PR-proteins","Os04g0470500","Transcript","moderately similar to ( 365) AT4G26090 | Symbols: RPS2 | RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding | chr4:13224596-13227325 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",-1.1549082,null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0224700","Transcript","moderately similar to ( 421) AT5G25620 | Symbols: YUC6 | YUC6 (YUCCA6); FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | chr5:8935520-8938224 REVERSE TrkA FMO-like protein|flavin monooxygenase, putative, expressed",-3.0126324,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os05g0242400","Transcript","protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.0872772,null,"Os01g0201100","UDP glucosyl and glucoronyl transferases",-0.7239413,-2.8292603,-2.2327733,-0.5213928,-1.9406099,-1.5913754,null,"17.6.1","hormone metabolism.gibberelin.synthesis-degradation","Os11g0265800","Transcript",null,"Os03g0267300","OsCFR",0,0,0,3.1320834,1.5331693,2.6779313]
[null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os08g0104600","Transcript","weakly similar to ( 158) FER1_ORYSA Ferredoxin-1, chloroplast precursor (Ferredoxin I) (Anti-disease protein 1) - Oryza sativa (Rice) protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",3.9559326,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0726300","Transcript","weakly similar to ( 121) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDweakly similar to ( 110) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",3.431485,null,28.1,"DNA.synthesis/chromatin structure","Os01g0256800","Transcript","highly similar to ( 940) AT2G47680 | Symbols: | zinc finger (CCCH type) helicase family protein | chr2:19545828-19550871 REVERSE HrpA PRK11131 PRK11664 DEXHc protein|zinc finger helicase family protein, putative, expressed",1.3073591,null,"20.1.7","stress.biotic.PR-proteins","Os01g0953400","Transcript","moderately similar to ( 215) AT5G45500 | Symbols: | unknown protein | chr5:18432636-18434951 REVERSE protein|Leucine Rich Repeat family protein, expressed",1.2142234,null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0100400","Transcript","highly similar to ( 706) AT4G12420 | Symbols: SKU5 | SKU5; copper ion binding / oxidoreductase | chr4:7349941-7352868 REVERSEmoderately similar to ( 438) ASO_BRANA L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 SufI protein|monocopper oxidase, putative, expressed",1.2615339,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os12g0420400","Transcript","moderately similar to ( 240) AT4G12800 | Symbols: PSAL | PSAL (photosystem I subunit L) | chr4:7521469-7522493 FORWARDmoderately similar to ( 316) PSAL_HORVU Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Hordeum vulgare (Barley)PsaL psaL PRK00704 protein|photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed",2.9661806,null,"Os05g0101600","cytochrome P450",1.7024579,1.5389047,1.8164568,0.64460945,1.064249,1.9086981,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os03g0856700","Transcript",null,"Os07g0489800","Ferredoxin",0,0,0,2.6983967,1.7458744,3.0292492]
[null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os03g0213200","Transcript","weakly similar to ( 166) AT5G07950 | Symbols: | unknown protein | chr5:2540530-2542047 REVERSE protein|expressed protein",-1.0243396,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0220400","Transcript","protein|GATA zinc finger domain containing protein, expressed",1.3303136,null,28.1,"DNA.synthesis/chromatin structure","Os05g0539700","Transcript","moderately similar to ( 375) AT5G56950 | Symbols: NFA03, NFA3, NAP1;3 | NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding | chr5:23032618-23035299 FORWARD NAP protein|NAP domain containing protein, putative, expressed",-0.98944664,null,"20.1.7","stress.biotic.PR-proteins","Os11g0179000","Transcript","weakly similar to ( 141) AT5G49040 | Symbols: | disease resistance-responsive protein-related / dirigent protein-related | chr5:19882676-19883251 REVERSEDirigent protein|dirigent, putative, expressed",3.859347,null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0372700","Transcript","moderately similar to ( 352) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 334) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",-1.1529967,null,"1.1.2.2","PS.lightreaction.photosystem I.PSI polypeptide subunits","Os12g0189400","Transcript","weakly similar to ( 156) AT5G64040 | Symbols: PSAN | PSAN; calmodulin binding | chr5:25628690-25629409 REVERSEweakly similar to ( 166) PSAN_HORVU Photosystem I reaction center subunit N, chloroplast precursor (PSI-N) - Hordeum vulgare (Barley)PsaN protein|photosystem I reaction center subunit N, chloroplast precursor, putative, expressed",2.3794901,null,"Os03g0175600","nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases",{"$nulls":3},0.69760895,0.6966462,1.7601385,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os01g0883800","Transcript",null,"Os11g0707100","Hypothetical conserved gene.",0,0,0,3.807269,1.397872,2.7571783]
[null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os04g0412200","Transcript","weakly similar to ( 143) AT2G27510 | Symbols: ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr2:11758281-11758748 REVERSEweakly similar to ( 147) FER1_RAPSA Ferredoxin, root R-B1 - Raphanus sativus (Radish)petF fer2 Fer2 protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",2.7985,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0155400","Transcript","protein|GATA zinc finger domain containing protein, expressed",2.987538,null,28.1,"DNA.synthesis/chromatin structure","Os03g0669000","Transcript","highly similar to ( 533) AT5G60990 | Symbols: | DEAD/DEAH box helicase, putative (RH10) | chr5:24546601-24549148 REVERSEmoderately similar to ( 208) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK11192 PRK11634 PRK10590 DEADc PRK01297 PRK04537 PRK04837 DEAD DEXDc DEXDc HELICc Lhr Helicase_C COG1205 HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.0285134,null,"20.1.7","stress.biotic.PR-proteins","Os01g0603100","Transcript","weakly similar to ( 191) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",1.8115629,null,26.7,"misc.oxidases - copper, flavone etc.","Os09g0503100","Transcript","moderately similar to ( 321) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 315) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",2.622944,{"$nulls":8},"Os12g0210200","Glutathione S transferases",{"$nulls":3},0.7161455,1.0884361,1.3410869,{"$nulls":6},"Os06g0608700","Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13).",0,0,0,3.4840193,1.776948,2.7194958]
[null,"1.1.5.3","PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase","Os06g0107700","Transcript","highly similar to ( 551) AT1G20020 | Symbols: ATLFNR2 | FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding | chr1:6942851-6944868 FORWARDhighly similar to ( 656) FENR1_ORYSA Ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Oryza sativa (Rice) CysJ NAD_binding_1 PRK06214 cysJ protein|ferredoxin--NADP reductase, chloroplast precursor, putative, expressed",2.1411397,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0567900","Transcript","very weakly similar to (95.1) AT2G18380 | Symbols: | transcription factor | chr2:7982868-7984017 REVERSE protein|GATA zinc finger domain containing protein, expressed",-1.055427,null,28.1,"DNA.synthesis/chromatin structure","Os01g0970600","Transcript","highly similar to ( 543) AT5G19210 | Symbols: | DEAD/DEAH box helicase, putative | chr5:6462100-6463687 FORWARDweakly similar to ( 127) IF4A8_TOBAC Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) SrmB PRK11776 PRK04837 PRK11192 PRK01297 DEADc PRK10590 PRK11634 PRK04537 DEAD DEXDc DEXDc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",1.3733307,null,"20.1.7","stress.biotic.PR-proteins","Os10g0130800","Transcript","moderately similar to ( 217) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|disease resistance RPP13-like protein 1, putative, expressed",1.999849,null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0671200","Transcript","highly similar to ( 600) AT2G43020 | Symbols: ATPAO2 | ATPAO2 (Polyamine oxidase 2); amine oxidase/ electron carrier/ oxidoreductase | chr2:17891945-17894440 FORWARDweakly similar to ( 141) PAO_MAIZE Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) Amino_oxidase COG1231 HemY PRK11883 COG1233 protein|amine oxidase, flavin-containing, domain containing protein, expressed",-1.2848374,null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os05g0555300","Transcript","weakly similar to ( 169) AT4G32590 | Symbols: | ferredoxin-related | chr4:15721417-15722781 FORWARD protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",1.7379131,null,"Os01g0100400","oxidases - copper, flavone etc.",1.9229665,2.8794527,3.5267024,0.73699284,1.1891785,1.8584304,null,"Gramene PlantReactome",{"$nulls":4},"Os07g0544800","OsPsbQ",0,0,0,3.5283136,1.5184879,2.9385176]
[null,"1.1.5.4","PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase","Os01g0120600","Transcript","moderately similar to ( 227) AT1G15140 | Symbols: | oxidoreductase NAD-binding domain-containing protein | chr1:5210642-5212137 REVERSEweakly similar to ( 176) K502_ACTCH Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao)Hmp protein|fruit protein PKIWI502, putative, expressed",-1.028007,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os06g0571800","Transcript","very weakly similar to (86.7) AT5G56860 | Symbols: GNC | GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor | chr5:22989630-22991351 REVERSE protein|GATA zinc finger domain containing protein, expressed",3.0469806,null,28.1,"DNA.synthesis/chromatin structure","Os06g0697200","Transcript","highly similar to ( 789) AT5G51280 | Symbols: | DEAD-box protein abstrakt, putative | chr5:20841456-20843645 FORWARDmoderately similar to ( 239) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 DEADc PRK11192 PRK04837 PRK01297 PRK11634 PRK04537 DEAD DEXDc HELICc DEXDc Lhr Helicase_C HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-2.5212672,null,"20.1.7","stress.biotic.PR-proteins","Os11g0179700","Transcript","weakly similar to ( 152) AT5G42500 | Symbols: | disease resistance-responsive family protein | chr5:16994359-16994916 REVERSEDirigent protein|dirigent, putative, expressed",2.4432633,null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0368000","Transcript","moderately similar to ( 353) AT5G61290 | Symbols: | flavin-containing monooxygenase family protein / FMO family protein | chr5:24648599-24650647 FORWARD FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",2.6936905,null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os07g0489800","Transcript","weakly similar to ( 160) AT3G16250 | Symbols: NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding | chr3:5507091-5508320 REVERSE protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",2.4911735,null,"Os06g0623300","alcohol dehydrogenases",{"$nulls":3},0.90790653,0.8569927,1.35532,null,"Os06g0474800",{"$nulls":4},"Os06g0320500","OsLhca1",0,0,0,3.4237003,1.9968271,2.6923733]
[null,"1.1.5.4","PS.lightreaction.other electron carrier (ox/red).ferredoxin oxireductase","Os02g0328300","Transcript","moderately similar to ( 207) AT1G15140 | Symbols: | oxidoreductase NAD-binding domain-containing protein | chr1:5210642-5212137 REVERSEweakly similar to ( 161) K502_ACTCH Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) protein|fruit protein PKIWI502, putative, expressed",1.9830475,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0806400","Transcript","weakly similar to ( 131) AT3G54810 | Symbols: BME3-ZF, BME3 | zinc finger (GATA type) family protein | chr3:20296957-20298236 FORWARD protein|GATA zinc finger domain containing protein, expressed",-1.787879,null,28.1,"DNA.synthesis/chromatin structure","Os02g0699700","Transcript","nearly identical (1529) AT3G23890 | Symbols: TOPII, ATTOPII | TOPII (TOPOISOMERASE II); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ DNA topoisomerase/ DNA-dependent ATPase | chr3:8624931-8631106 FORWARDnearly identical (1503) TOP2_PEA DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) TOP2c TOP4c GyrB TOP4c DNA_topoisoIV GyrA TOPRIM_TopoIIA PRK05559 TopoIIA_Trans_ScTopoIIA TOPRIM_TopoIIA_like gyrB DNA_gyraseB PRK09631 TOPRIM_TopoIIA_GyrB PRK09630 PRK05561 PRK05560 protein|DNA topoisomerase 2, putative, expressed",1.558035,null,"20.1.7","stress.biotic.PR-proteins","Os11g0652100","Transcript","very weakly similar to (89.0) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE protein|expressed protein",1.8690187,null,26.7,"misc.oxidases - copper, flavone etc.","Os06g0203200","Transcript","moderately similar to ( 289) AT1G19250 | Symbols: FMO1 | FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); FAD binding / NADP or NADPH binding / electron carrier/ flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | chr1:6650656-6653053 REVERSE FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",2.4872782,null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os08g0104600","Transcript","weakly similar to ( 158) FER1_ORYSA Ferredoxin-1, chloroplast precursor (Ferredoxin I) (Anti-disease protein 1) - Oryza sativa (Rice) protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",3.9559326,null,"Os01g0962700","Peroxidases",{"$nulls":3},0.9323368,0.87059593,1.0547056,null,"Os11g0668300",{"$nulls":4},"Os12g0420400","OsPSAL",0,0,0,3.6952734,2.1691704,3.0340977]
[null,"1.1.6","PS.lightreaction.NADH DH","Os01g0882500","Transcript","moderately similar to ( 262) AT5G58260 | Symbols: | Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. | chr5:23561356-23561929 REVERSE protein|NADH dehydrogenase I subunit N, putative, expressed",3.1369257,null,"27.3.10","RNA.regulation of transcription.C2C2(Zn) YABBY family","Os07g0160100","Transcript","weakly similar to ( 141) AT1G08465 | Symbols: YAB2 | YAB2 (YABBY2); transcription factor | chr1:2676033-2679382 FORWARDmoderately similar to ( 276) YAB1_ORYSA Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice)YABBY protein|YABBY domain containing protein, putative, expressed",2.8481522,null,28.1,"DNA.synthesis/chromatin structure","Os08g0416100","Transcript","highly similar to ( 835) AT1G77030 | Symbols: | ATP binding / ATP-dependent helicase/ RNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding | chr1:28947492-28951526 REVERSEmoderately similar to ( 213) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11192 PRK11776 DEADc PRK04837 PRK10590 PRK04537 PRK01297 PRK11634 DEAD DEXDc DEXDc Lhr COG1205 HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-0.951838,null,"20.1.7","stress.biotic.PR-proteins","Os07g0273700","Transcript","moderately similar to ( 290) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|WRKY123, expressed",4.3932843,null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0687800","Transcript","highly similar to ( 588) AT5G11540 | Symbols: | FAD-binding domain-containing protein | chr5:3703002-3704981 REVERSE GlcD protein|FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed",1.5865997,null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os03g0213200","Transcript","weakly similar to ( 166) AT5G07950 | Symbols: | unknown protein | chr5:2540530-2542047 REVERSE protein|expressed protein",-1.0243396,null,"Os06g0537700","beta 1,3 glucan hydrolases",{"$nulls":3},0.93355775,0.853863,1.2874551,null,"Os01g0246700",{"$nulls":4},"Os02g0698000","OsPrk",0,0,0,3.7839236,2.1147408,3.079825]
[null,"1.1.30","PS.lightreaction.state transition","Os05g0480000","Transcript","highly similar to ( 560) AT5G01920 | Symbols: STN8 | STN8; kinase/ protein kinase | chr5:359154-360867 FORWARDmoderately similar to ( 248) STT7_CHLRE Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii S_TKc Pkinase S_TKc SPS1 protein|serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed",1.9188571,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0871200","Transcript","moderately similar to ( 436) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS1-18 - C2H2 zinc finger protein, expressed",-1.065425,null,28.1,"DNA.synthesis/chromatin structure","Os02g0817800","Transcript","moderately similar to ( 239) AT1G07540 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2); DNA binding | chr1:2318433-2321048 REVERSE protein|MYB family transcription factor, putative, expressed",1.8248959,null,"20.1.7","stress.biotic.PR-proteins","Os10g0130600","Transcript","moderately similar to ( 298) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|powdery mildew resistance protein PM3b, putative, expressed",-1.62406,null,26.7,"misc.oxidases - copper, flavone etc.","Os10g0413500","Transcript","moderately similar to ( 408) AT3G28480 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr3:10676266-10678262 REVERSE P4Hc protein|oxidoreductase, putative, expressed",-1.124023,null,"1.1.5.2","PS.lightreaction.other electron carrier (ox/red).ferredoxin","Os04g0412200","Transcript","weakly similar to ( 143) AT2G27510 | Symbols: ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr2:11758281-11758748 REVERSEweakly similar to ( 147) FER1_RAPSA Ferredoxin, root R-B1 - Raphanus sativus (Radish)petF fer2 Fer2 protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",2.7985,null,"Os06g0351500","GDSL-motif lipase",{"$nulls":3},0.9497018,1.0591397,1.7623353,null,"Os03g0782500",{"$nulls":4},"Os05g0242400","Hypothetical protein.",0,0,0,3.6526384,2.10962,3.4995728]
[null,"1.1.40","PS.lightreaction.cyclic electron flow-chlororespiration","Os08g0566600","Transcript","weakly similar to ( 124) AT2G05620 | Symbols: PGR5 | PGR5 (proton gradient regulation 5); electron carrier | chr2:2081204-2081687 REVERSE protein|PGR5, putative, expressed",2.6051998,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0195000","Transcript","moderately similar to ( 308) AT1G55110 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding | chr1:20560406-20562625 REVERSE protein|ZOS1-04 - C2H2 zinc finger protein, expressed",-0.9494095,null,28.1,"DNA.synthesis/chromatin structure","Os09g0573000","Transcript","moderately similar to ( 330) AT5G40405 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G66520.1); Has 12548 Blast hits to 5076 proteins in 168 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants - 12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). | chr5:16169315-16171153 FORWARD IPPc protein|expressed protein",1.0080684,null,"20.1.7","stress.biotic.PR-proteins","Os11g0645400","Transcript","weakly similar to ( 104) AT1G65870 | Symbols: | disease resistance-responsive family protein | chr1:24503624-24504193 FORWARDDirigent protein|dirigent, putative, expressed",8.899306,null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0359100","Transcript","moderately similar to ( 317) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 308) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",4.969017,{"$nulls":8},"Os06g0640800","cytochrome P450",{"$nulls":3},1.048284,2.7921052,2.450748,null,"Os07g0686600",{"$nulls":4},"Os07g0148900","OsPSAK",0,0,0,3.8115826,2.3530207,3.345026]
[null,"1.1.40","PS.lightreaction.cyclic electron flow-chlororespiration","Os04g0668900","Transcript","moderately similar to ( 288) AT4G22260 | Symbols: IM, IM1 | IM (IMMUTANS); alternative oxidase | chr4:11769967-11772350 REVERSEAOX protein|immutans protein, putative, expressed",-1.6065053,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0951100","Transcript","moderately similar to ( 414) AT3G07940 | Symbols: | zinc finger and C2 domain protein, putative | chr3:2529542-2531368 FORWARD ArfGap ArfGap COG5347 C2 C2 protein|stromal membrane-associated protein, putative, expressed",3.5703247,null,28.1,"DNA.synthesis/chromatin structure","Os12g0289600","Transcript","moderately similar to ( 327) AT4G24790 | Symbols: | ATP binding / DNA binding / DNA-directed DNA polymerase | chr4:12778222-12781345 FORWARD DnaX PRK05563 PRK07133 PRK05896 PRK09111 PRK07270 PRK06674 PRK06305 PRK06645 PRK06647 PRK08451 PRK07994 PRK07003 PRK12323 PRK08853 PRK08691 PRK05648 PRK06872 PRK08770 protein|ATP binding protein, putative, expressed",2.0825467,null,"20.1.7","stress.biotic.PR-proteins","Os04g0111100","Transcript","moderately similar to ( 241) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|rp1, putative, expressed",-1.3740374,{"$nulls":8},"1.1.5.3","PS.lightreaction.other electron carrier (ox/red).ferredoxin reductase","Os06g0107700","Transcript","highly similar to ( 551) AT1G20020 | Symbols: ATLFNR2 | FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding | chr1:6942851-6944868 FORWARDhighly similar to ( 656) FENR1_ORYSA Ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Oryza sativa (Rice) CysJ NAD_binding_1 PRK06214 cysJ protein|ferredoxin--NADP reductase, chloroplast precursor, putative, expressed",2.1411397,null,"Os04g0613700","UDP glucosyl and glucoronyl transferases",{"$nulls":3},1.0612154,1.4742737,1.9792662,null,"Os01g0190300",{"$nulls":4},"Os07g0513000","ATP synthase gamma chain, chloroplast (EC 3.6.1.34) (Fragment).",0,0,0,3.6649747,2.2440948,3.6252513]
[null,"1.2.2","PS.photorespiration.glycolate oxydase","Os03g0786100","Transcript","highly similar to ( 612) AT3G14420 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4821899-4823899 FORWARDhighly similar to ( 610) GOX_SPIOL Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) FMN_dh alpha_hydroxyacid_oxid_FMN FCB2_FMN idi LOX_like_FMN LMO_FMN MDH_FMN lldD PRK05437 protein|hydroxyacid oxidase 1, putative, expressed",1.5200104,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0572900","Transcript","moderately similar to ( 220) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS2-11 - C2H2 zinc finger protein, expressed",-1.0505309,null,28.1,"DNA.synthesis/chromatin structure","Os07g0685500","Transcript","moderately similar to ( 377) AT5G17780 | Symbols: | hydrolase, alpha/beta fold family protein | chr5:5867429-5868976 REVERSE Abhydrolase_1 MhpC protein|hydrolase, alpha/beta fold family domain containing protein, expressed",4.135945,null,"20.1.7","stress.biotic.PR-proteins","Os11g0629600","Transcript","weakly similar to ( 117) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",-1.0702428,null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os02g0635000","Transcript","moderately similar to ( 362) AT5G22300 | Symbols: NIT4 | NIT4 (NITRILASE 4); 3-cyanoalanine hydratase/ cyanoalanine nitrilase/ indole-3-acetonitrile nitrilase/ nitrilase/ nitrile hydratase | chr5:7379401-7381764 FORWARDmoderately similar to ( 379) NRL4_TOBAC Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) CN_hydrolase COG0388 protein|nitrilase, putative, expressed",1.2736211,{"$nulls":8},"Os02g0503100","cytochrome P450",{"$nulls":3},1.1251798,1.7795677,2.5946002,null,"Os01g0753500",{"$nulls":4},"Os04g0234600","OsFBPase",0,0,0,4.1468406,2.2849116,3.6692042]
[null,"1.2.4.4","PS.photorespiration.glycine cleavage.H protein","Os10g0516100","Transcript","moderately similar to ( 217) AT1G32470 | Symbols: | glycine cleavage system H protein, mitochondrial, putative | chr1:11739479-11740246 REVERSEmoderately similar to ( 302) GCSH_ORYSA Glycine cleavage system H protein, mitochondrial precursor - Oryza sativa (Rice) PRK01202 GCV_H GcvH protein|glycine cleavage system H protein, putative, expressed",4.7640057,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0198300","Transcript","moderately similar to ( 416) AT4G21160 | Symbols: ZAC | ZAC; ARF GTPase activator/ phospholipid binding | chr4:11284694-11286532 FORWARD ArfGap ArfGap COG5347 C2 C2 C2 protein|stromal membrane-associated protein, putative, expressed",1.8940853,null,28.1,"DNA.synthesis/chromatin structure","Os03g0214100","Transcript","highly similar to ( 784) AT5G08020 | Symbols: ATRPA70B, RPA70B | RPA70B (RPA70-KDA SUBUNIT B); DNA binding / nucleic acid binding | chr5:2572107-2574879 FORWARDRep_fac-A_C RPA1_DBD_C RPA1_DBD_A RPA1_DBD_B Rep-A_N RPA1N protein|RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed",-1.4651551,null,"20.1.7","stress.biotic.PR-proteins","Os01g0721300","Transcript","very weakly similar to (81.3) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD protein|NB-ARC domain containing protein, expressed",-1.2860575,null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os03g0175600","Transcript","moderately similar to ( 472) AT5G12040 | Symbols: | carbon-nitrogen hydrolase family protein | chr5:3885162-3887772 FORWARD COG0388 CN_hydrolase protein|nitrilase, putative, expressed",1.0514646,null,"1.3.12","PS.calvin cycle.PRK","Os02g0698000","Transcript","highly similar to ( 674) AT1G32060 | Symbols: PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding | chr1:11532668-11534406 FORWARDhighly similar to ( 775) KPPR_WHEAT Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) PRK PRK07429 PRK Udk PRK05480 UMPK protein|phosphoribulokinase/Uridine kinase family protein, expressed",2.9928296,null,"Os03g0112900","cytochrome P450",{"$nulls":3},1.1306438,1.1971207,1.3300371,null,"Os01g0176000",{"$nulls":4},"Os05g0292800","One helix protein (OHP).",0,0,0,4.071433,2.3906717,3.6604462]
[null,"1.2.5","PS.photorespiration.serine hydroxymethyltransferase","Os03g0738400","Transcript","highly similar to ( 863) AT4G37930 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | chr4:17831891-17834742 REVERSEhighly similar to ( 869) GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) SHMT GlyA glyA protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed",2.250975,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os03g0279700","Transcript","very weakly similar to (97.4) AT3G53600 | Symbols: | zinc finger (C2H2 type) family protein | chr3:19875532-19876059 FORWARD protein|ZOS3-09 - C2H2 zinc finger protein, expressed",1.7891141,null,28.1,"DNA.synthesis/chromatin structure","Os04g0569000","Transcript","highly similar to ( 588) AT1G63160 | Symbols: | replication factor C 40 kDa, putative | chr1:23422068-23423771 REVERSE rfc PRK04132 PRK12402 HolB PRK04195 DnaX Rep_fac_C PRK07133 PRK05896 MGS1 PRK08451 protein|RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed",-1.3981885,null,"20.1.7","stress.biotic.PR-proteins","Os09g0357400","Transcript","weakly similar to ( 166) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC DUF1263 protein|retrotransposon protein, putative, unclassified, expressed",-1.6483129,null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os11g0438700","Transcript","moderately similar to ( 265) AT5G06060 | Symbols: | tropinone reductase, putative / tropine dehydrogenase, putative | chr5:1824066-1825833 REVERSEweakly similar to ( 106) FABG4_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 4 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 4) (Fragment) - Brassica napus (Rape) fabG PRK09242 fabG PRK12826 fabG PRK12829 PRK08213 FabG fabG PRK07479 PRK12939 PRK06124 PRK12827 PRK12429 PRK06484 PRK06935 fabG PRK07814 PRK08936 PRK06138 PRK12824 PRK07523 PRK06500 PRK07856 fabG PRK08643 PRK07576 PRK09135 fabG PRK06841 PRK07063 PRK08324 PRK08265 PRK07097 PRK06113 PRK08277 fabG PRK07677 fabG PRK06346 PRK08220 PRK06114 PRK12828 COG4221 PRK07060 PRK06172 PRK06523 PRK07069 fabG PRK08589 DltE PRK08063 PRK08993 PRK07035 PRK07633 PRK07062 PRK12745 PRK06057 PRK07326 PRK12481 PRK06122 PRK06949 PRK07067 PRK06198 PRK05867 PRK08226 PRK07478 PRK12743 fabG fabG PRK12937 PRK12747 PRK06398 PRK06171 PRK07774 PRK08085 PRK12935 PRK06701 fabG PRK07577 PRK07454 fabG PRK07074 PRK12748 PRK07890 PRK08628 PRK06200 PRK12746 fabG PRK12936 benD PRK06125 PRK05875 PRK09186 PRK06128 PRK08339 PRK07831 PRK08267 PRK07201 PRK09072 PRK12428 PRK07109 DltE PRK06123 adh_short PRK08945 PRK07825 PRK06181 PRK09134 PRK08278 FabI PRK05866 PRK12742 PRK09730 PRK05855 PRK08263 PRK07985 PRK05872 PRK08219 PRK12744 PRK06947 PRK06179 PRK06940 PRK08264 PRK12938 fabG PRK05650 PRK07041 PRK06483 PRK08416 fabG PRK07791 PRK12384 protein|tropinone reductase 2, putative, expressed",-1.3608128,{"$nulls":8},"Os12g0597400","oxidases - copper, flavone etc.",{"$nulls":3},1.1448812,0.9692292,1.8480377,null,"Os01g0176200",{"$nulls":4},"Os09g0346500","OsCAB1",0,0,0,3.1226683,3.1761074,3.8830214]
[null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os04g0107300","Transcript","moderately similar to ( 225) AT2G45630 | Symbols: | oxidoreductase family protein | chr2:18796000-18797089 FORWARD LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK07574 PRK06487 PRK06932 PRK11790 PRK06436 PRK00257 PRK08605 PRK12480 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.3097124,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0715000","Transcript","moderately similar to ( 340) AT5G20220 | Symbols: | zinc knuckle (CCHC-type) family protein | chr5:6822208-6825771 FORWARD protein|zinc knuckle domain containing protein, expressed",1.0285195,null,28.1,"DNA.synthesis/chromatin structure","Os08g0120200","Transcript","moderately similar to ( 385) AT4G24790 | Symbols: | ATP binding / DNA binding / DNA-directed DNA polymerase | chr4:12778222-12781345 FORWARD DnaX PRK07133 PRK08451 PRK05563 PRK06305 PRK05896 PRK07270 PRK06674 PRK08691 PRK06647 PRK06872 PRK07994 PRK08770 PRK07003 PRK12323 PRK08853 PRK05648 PRK07764 PRK06645 PRK09111 HolB rfc PRK12402 protein|ATP binding protein, putative, expressed",1.364872,null,"20.1.7","stress.biotic.PR-proteins","Os11g0657900","Transcript","moderately similar to ( 236) AT5G48620 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr5:19717406-19720932 FORWARD NB-ARC protein|RGH1A, putative, expressed",-2.0279644,null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os11g0438000","Transcript","weakly similar to ( 107) AT1G07440 | Symbols: | tropinone reductase, putative / tropine dehydrogenase, putative | chr1:2286700-2287665 REVERSE protein|tropinone reductase, putative, expressed",2.4885027,null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0274700","Transcript","moderately similar to ( 218) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 325) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",4.865291,null,"Os01g0930800","Gluco-, Galacto- and mannosidases",{"$nulls":3},1.1523767,1.6218467,1.1638174,null,"Os08g0428400",{"$nulls":4},"Os01g0805300","PsbP",0,0,0,4.650105,2.7135835,4.008142]
[null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os04g0106400","Transcript","moderately similar to ( 252) AT2G45630 | Symbols: | oxidoreductase family protein | chr2:18796000-18797089 FORWARD LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK06487 PRK07574 PRK06932 PRK11790 PRK12480 PRK08605 PRK06436 PRK00257 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.3684274,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0917400","Transcript","moderately similar to ( 309) AT3G02830 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARDhighly similar to ( 592) ZFNL2_ORYSA Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed",1.7494059,null,28.1,"DNA.synthesis/chromatin structure","Os02g0146600","Transcript","highly similar to ( 766) AT3G13920 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | chr3:4592635-4594094 REVERSEhighly similar to ( 812) IF4A_ORYSA Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) SrmB PRK11776 DEADc PRK11634 PRK11192 PRK10590 PRK01297 PRK04837 PRK04537 DEAD DEXDc HELICc DEXDc Lhr HELICc Helicase_C RecQ COG1205 protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.1400763,null,"20.1.7","stress.biotic.PR-proteins","Os01g0760400","Transcript","highly similar to ( 998) AT4G23440 | Symbols: | nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor | chr4:12237765-12240659 FORWARD protein|AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",-1.2372891,null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os06g0549300","Transcript","moderately similar to ( 406) AT4G20860 | Symbols: | FAD-binding domain-containing protein | chr4:11172726-11174318 FORWARDGlcD FAD_binding_4 protein|reticuline oxidase-like protein precursor, putative, expressed",3.1276186,null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0291400","Transcript","moderately similar to ( 238) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 364) RBS2_ORYSA Ribulose bisphosphate carboxylase small chain A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",7.0811596,null,"Os03g0300900","UDP glucosyl and glucoronyl transferases",1.8364024,3.3204675,2.1388378,1.1979575,2.0731926,1.8204107,null,"Os01g0254100",{"$nulls":4},"Os07g0577600","lhcA",0,0,0,3.960925,3.3817415,4.3961744]
[null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os01g0228600","Transcript","moderately similar to ( 347) AT1G79870 | Symbols: | oxidoreductase family protein | chr1:30044794-30045851 FORWARDvery weakly similar to (84.7) DHGY_CUCSA Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK11790 PRK06487 PRK07574 PRK06932 PRK12480 PRK06436 PRK08605 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.4682945,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os07g0568300","Transcript","moderately similar to ( 361) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-0.9563233,null,28.1,"DNA.synthesis/chromatin structure","Os12g0414900","Transcript","moderately similar to ( 340) AT1G11800 | Symbols: | endonuclease/exonuclease/phosphatase family protein | chr1:3985520-3987263 REVERSE protein|endonuclease/Exonuclease/phosphatase family protein, expressed",1.0148546,null,"20.1.7","stress.biotic.PR-proteins","Os09g0481600","Transcript","highly similar to ( 989) AT5G56220 | Symbols: | nucleoside-triphosphatase/ nucleotide binding | chr5:22754871-22757792 FORWARD protein|AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",3.2311223,{"$nulls":8},"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0292400","Transcript","weakly similar to ( 194) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 273) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",6.6509457,null,"Os07g0112000","oxidases - copper, flavone etc.",{"$nulls":3},1.1994438,1.7271657,1.2448869,null,"Os11g0490900",{"$nulls":4},"Os08g0104600","OsFd1",0,0,0,4.620801,3.2212534,4.0257435]
[null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os02g0101500","Transcript","highly similar to ( 501) AT1G68010 | Symbols: HPR | HPR; glycerate dehydrogenase/ poly(U) binding | chr1:25493418-25495720 FORWARDmoderately similar to ( 481) DHGY_CUCSA Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) 2-Hacid_dh LdhA SerA 2-Hacid_dh_C PRK08410 PRK11790 PRK06487 PRK06932 PRK08605 PRK12480 PRK00257 PRK07574 PRK06436 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",2.1582224,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os12g0515500","Transcript","moderately similar to ( 369) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-1.0432993,null,28.1,"DNA.synthesis/chromatin structure","Os04g0408600","Transcript","weakly similar to ( 116) AT2G36410 | Symbols: | unknown protein | chr2:15279041-15280270 FORWARDDUF662 protein|expressed protein",5.978925,null,"20.1.7","stress.biotic.PR-proteins","Os11g0644700","Transcript","weakly similar to ( 105) AT5G42510 | Symbols: | disease resistance-responsive family protein | chr5:16998268-16998816 REVERSEDirigent protein|dirigent, putative, expressed",6.1477056,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0727300","Transcript","highly similar to ( 703) AT4G38270 | Symbols: GAUT3 | GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr4:17938433-17941410 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.0252112,{"$nulls":8},"Os08g0152300","cytochrome P450",{"$nulls":3},1.2110002,1.0788298,1.4614267,null,"Os01g0195000",{"$nulls":4},"Os05g0496200","OsPGK3",0,0,0,4.6787996,3.3300104,4.289151]
[null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0274700","Transcript","moderately similar to ( 218) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 325) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",4.865291,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0192000","Transcript","moderately similar to ( 241) AT2G19810 | Symbols: | zinc finger (CCCH-type) family protein | chr2:8550419-8551498 FORWARD protein|zinc finger/CCCH transcription factor, putative, expressed",2.8330657,null,28.1,"DNA.synthesis/chromatin structure","Os01g0801000","Transcript","moderately similar to ( 495) AT2G41460 | Symbols: ARP | ARP; DNA-(apurinic or apyrimidinic site) lyase | chr2:17285731-17288041 FORWARDmoderately similar to ( 230) APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) XthA Exo_endo_phos PRK11756 protein|apurinic endonuclease-redox protein, putative, expressed",1.2658134,null,"20.1.7","stress.biotic.PR-proteins","Os09g0272900","Transcript","moderately similar to ( 306) AT1G12220 | Symbols: RPS5 | RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | chr1:4145011-4147680 FORWARD NB-ARC protein|disease resistance protein RPS2, putative, expressed",-1.7700769,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0712500","Transcript","highly similar to ( 893) AT3G61130 | Symbols: GAUT1, LGT1 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr3:22622399-22625514 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.5540142,null,"1.3.13","PS.calvin cycle.rubisco interacting","Os11g0707100","Transcript","weakly similar to ( 180) AT2G39730 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | chr2:16571174-16573345 REVERSEmoderately similar to ( 219) RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) protein|expressed protein",2.6541064,null,"Os06g0641800","cytochrome P450",{"$nulls":3},1.2165394,1.4335775,1.5905085,null,"Os09g0555100",{"$nulls":4},"Os03g0333400","OsPSB27",0,0,0,5.053234,3.1388664,4.2317095]
[null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0291400","Transcript","moderately similar to ( 238) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 364) RBS2_ORYSA Ribulose bisphosphate carboxylase small chain A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",7.0811596,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os08g0174500","Transcript","weakly similar to ( 176) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 164) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209,null,28.1,"DNA.synthesis/chromatin structure","Os09g0487200","Transcript","highly similar to ( 541) AT2G42320 | Symbols: | nucleolar protein gar2-related | chr2:17628102-17630657 FORWARD protein|expressed protein",2.6139994,null,"20.1.7","stress.biotic.PR-proteins","Os10g0163040","Transcript","moderately similar to ( 384) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3213081,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0305700","Transcript","moderately similar to ( 270) AT2G16890 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:7316938-7319022 FORWARDweakly similar to ( 139) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|anthocyanin 3-O-beta-glucosyltransferase, putative, expressed",5.75091,null,"1.3.13","PS.calvin cycle.rubisco interacting","Os09g0411650","Transcript","highly similar to ( 513) AT1G14030 | Symbols: | ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative | chr1:4805493-4807440 REVERSEhighly similar to ( 509) RBCMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) Rubis-subs-bind protein|ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed",1.2457805,null,"Os02g0669000","GDSL-motif lipase",3.0028124,4.199963,3.169322,1.2233348,0.6579962,2.0965476,null,"Os11g0609600",{"$nulls":4},"Os02g0764500","Lhca5 protein.",0,0,0,4.8823376,3.2167993,4.71671]
[null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0292400","Transcript","weakly similar to ( 194) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 273) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",6.6509457,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os05g0463800","Transcript","weakly similar to ( 185) AT2G37060 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | chr2:15576336-15577660 FORWARDweakly similar to ( 190) NFYB_MAIZE Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209,null,28.1,"DNA.synthesis/chromatin structure","Os03g0169800","Transcript","moderately similar to ( 220) AT3G47490 | Symbols: | HNH endonuclease domain-containing protein | chr3:17498337-17500731 FORWARD protein|HNH endonuclease domain-containing protein, putative, expressed",1.6628205,null,"20.1.7","stress.biotic.PR-proteins","Os06g0146100","Transcript","moderately similar to ( 268) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|NBS-LRR disease resistance protein, putative, expressed",1.5859522,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os02g0243300","Transcript","moderately similar to ( 337) AT4G01070 | Symbols: GT72B1, UGT72B1 | GT72B1; UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups | chr4:461858-463300 REVERSEweakly similar to ( 143) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",3.875913,{"$nulls":8},"Os03g0238600","acid and other phosphatases",{"$nulls":3},1.2336545,1.1904845,1.7672267,null,"Os02g0635000",{"$nulls":4},"Os08g0435900","OsLhca4",0,0,0,4.9677353,3.6492825,4.3850317]
[null,"1.3.3","PS.calvin cycle.phosphoglycerate kinase","Os05g0496200","Transcript","highly similar to ( 675) AT1G56190 | Symbols: | phosphoglycerate kinase, putative | chr1:21028622-21030454 FORWARDhighly similar to ( 701) PGKH_WHEAT Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Triticum aestivum (Wheat) pgk Phosphoglycerate_kinase PGK Pgk protein|phosphoglycerate kinase protein, putative, expressed",4.0993204,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os03g0413000","Transcript","weakly similar to ( 194) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 170) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF HHT1 protein|histone-like transcription factor and archaeal histone, putative, expressed",3.2168026,null,28.1,"DNA.synthesis/chromatin structure","Os03g0728800","Transcript","highly similar to ( 541) AT4G34910 | Symbols: | DEAD/DEAH box helicase, putative (RH16) | chr4:16631661-16634834 FORWARDweakly similar to ( 125) IF4A7_TOBAC Eukaryotic initiation factor 4A-7 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) - Nicotiana tabacum (Common tobacco) SrmB PRK11776 PRK11192 PRK04837 PRK10590 DEADc PRK01297 PRK11634 DEAD DEXDc PRK04537 DEXDc HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.0667939,null,"20.1.7","stress.biotic.PR-proteins","Os11g0639600","Transcript","moderately similar to ( 222) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|non-TIR-NBS-LRR type resistance protein, putative, expressed",-1.0066692,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0489200","Transcript","moderately similar to ( 274) AT1G22360 | Symbols: AtUGT85A2 | AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups | chr1:7895068-7897527 REVERSEweakly similar to ( 161) UFOG_SOLME Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) UDPGT protein|cytokinin-O-glucosyltransferase 2, putative, expressed",-2.356139,null,"1.3.3","PS.calvin cycle.phosphoglycerate kinase","Os05g0496200","Transcript","highly similar to ( 675) AT1G56190 | Symbols: | phosphoglycerate kinase, putative | chr1:21028622-21030454 FORWARDhighly similar to ( 701) PGKH_WHEAT Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Triticum aestivum (Wheat) pgk Phosphoglycerate_kinase PGK Pgk protein|phosphoglycerate kinase protein, putative, expressed",4.0993204,null,"Os06g0727300","UDP glucosyl and glucoronyl transferases",{"$nulls":3},1.260015,0.70084476,1.1147738,null,"Os01g0231000",{"$nulls":4},"Os01g0869800","OsPSBS",0,0,0,4.349475,3.849701,4.9512377]
[null,"1.3.3","PS.calvin cycle.phosphoglycerate kinase","Os02g0169300","Transcript","highly similar to ( 575) AT1G79550 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | chr1:29924347-29926295 REVERSEhighly similar to ( 602) PGKY_WHEAT Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) pgk Phosphoglycerate_kinase PGK Pgk protein|phosphoglycerate kinase protein, putative, expressed",-0.987922,null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os03g0852300","Transcript","very weakly similar to (82.0) AT1G07980 | Symbols: NF-YC10 | NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | chr1:2473523-2474910 REVERSE protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.1165094,null,28.1,"DNA.synthesis/chromatin structure","Os08g0101600","Transcript","moderately similar to ( 486) AT3G48900 | Symbols: | DNA binding / catalytic/ chromatin binding / nuclease | chr3:18131854-18136239 FORWARD XPG PRK03980 XPG_I protein|flap endonuclease, putative, expressed",1.1028924,null,"20.1.7","stress.biotic.PR-proteins","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os02g0207100","Transcript","weakly similar to ( 126) AT2G36760 | Symbols: UGT73C2 | UGT73C2 (UDP-glucosyl transferase 73C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:15413042-15414532 REVERSEvery weakly similar to (80.9) IAAG_MAIZE Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) protein|glucosyltransferase, putative, expressed",-1.156537,null,"1.3.3","PS.calvin cycle.phosphoglycerate kinase","Os02g0169300","Transcript","highly similar to ( 575) AT1G79550 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | chr1:29924347-29926295 REVERSEhighly similar to ( 602) PGKY_WHEAT Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) pgk Phosphoglycerate_kinase PGK Pgk protein|phosphoglycerate kinase protein, putative, expressed",-0.987922,null,"Os03g0248300","cytochrome P450",2.0892258,4.2362585,3.708201,1.2728128,3.2690258,3.6514773,null,"Os09g0361500",{"$nulls":4},"Os07g0558400","OsLHCB4",0,0,0,5.563139,3.7513428,4.7991667]
[null,"1.3.4","PS.calvin cycle.GAP","Os04g0459500","Transcript","highly similar to ( 577) AT3G26650 | Symbols: GAPA, GAPA-1 | GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | chr3:9795226-9796848 FORWARDhighly similar to ( 648) G3PA_MAIZE Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Zea mays (Maize) PRK07403 GapA PRK07729 PRK08955 PRK08289 Gp_dh_C Gp_dh_N protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed",6.2933326,null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os06g0667100","Transcript","weakly similar to ( 192) AT1G56170 | Symbols: HAP5B, ATHAP5B, NF-YC2 | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | chr1:21025118-21025717 FORWARD HAP5 protein|core histone H2A/H2B/H3/H4, putative, expressed",-1.2620894,null,28.1,"DNA.synthesis/chromatin structure","Os07g0659500","Transcript","nearly identical (1552) AT3G57060 | Symbols: | binding | chr3:21115078-21121051 REVERSE COG5098 protein|condensin complex subunit 1, putative, expressed",3.2362716,null,"20.1.7","stress.biotic.PR-proteins","Os04g0111900","Transcript","moderately similar to ( 316) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|disease resistance protein RGA3, putative, expressed",-1.3404331,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0597800","Transcript","moderately similar to ( 360) AT2G15490 | Symbols: UGT73B4 | UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr2:6761750-6763398 FORWARDweakly similar to ( 165) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed",-2.084027,{"$nulls":8},"Os01g0243700","beta 1,3 glucan hydrolases",{"$nulls":3},1.3259134,1.1420102,1.3179407,null,"Os05g0230700",{"$nulls":4},"Os10g0516100","OsGDCH",0,0,0,5.4815607,3.923296,4.8871603]
[null,"1.3.4","PS.calvin cycle.GAP","Os03g0129300","Transcript","highly similar to ( 529) AT1G42970 | Symbols: GAPB | GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | chr1:16127552-16129584 FORWARDhighly similar to ( 511) G3PB_SPIOL Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Spinacia oleracea (Spinach) PRK07403 PRK07729 GapA PRK08955 PRK08289 Gp_dh_C Gp_dh_N protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed",3.3167012,null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os02g0174000","Transcript","moderately similar to ( 263) AT1G79430 | Symbols: APL, WDY | APL (ALTERED PHLOEM DEVELOPMENT); transcription factor/ transcription regulator | chr1:29877521-29879135 REVERSE protein|Myb transcription factor, putative, expressed",1.1381454,null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os02g0801700","Transcript","very weakly similar to (81.6) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDweakly similar to ( 124) TRAC9_MAIZE Putative AC9 transposase - Zea mays (Maize) hATC protein|transposon protein, putative, unclassified, expressed",1.7780298,null,"20.1.7","stress.biotic.PR-proteins","Os04g0648200","Transcript","moderately similar to ( 329) AT1G74190 | Symbols: AtRLP15 | AtRLP15 (Receptor Like Protein 15); protein binding | chr1:27902590-27906158 REVERSEweakly similar to ( 181) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) protein|Cf-4A protein, putative, expressed",-2.462386,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os03g0359600","Transcript","moderately similar to ( 445) AT3G06260 | Symbols: GATL4 | GATL4 (Galacturonosyltransferase-like 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr3:1893804-1894859 REVERSEGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",3.041989,null,"1.3.4","PS.calvin cycle.GAP","Os04g0459500","Transcript","highly similar to ( 577) AT3G26650 | Symbols: GAPA, GAPA-1 | GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | chr3:9795226-9796848 FORWARDhighly similar to ( 648) G3PA_MAIZE Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Zea mays (Maize) PRK07403 GapA PRK07729 PRK08955 PRK08289 Gp_dh_C Gp_dh_N protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed",6.2933326,null,"Os02g0173100","cytochrome P450",1.5949202,2.7238503,3.209628,1.3510666,1.1753383,0.9931431,null,"Os01g0670800",{"$nulls":4},"Os12g0274700","OsRbcS",0,0,0,5.7311306,4.270955,4.593788]
[null,"1.3.5","PS.calvin cycle.TPI","Os01g0841600","Transcript","moderately similar to ( 266) AT3G55440 | Symbols: ATCTIMC, TPI | TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | chr3:20553794-20556078 FORWARDmoderately similar to ( 284) TPIS_ORYSA Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Oryza sativa (Rice) TIM TIM tpiA TpiA protein|triosephosphate isomerase, cytosolic, putative, expressed",-1.489267,null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os04g0665600","Transcript","weakly similar to ( 126) AT5G06800 | Symbols: | myb family transcription factor | chr5:2103374-2105680 FORWARD protein|Myb-like DNA-binding domain containing protein, putative, expressed",-1.3667952,null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os01g0105300","Transcript","very weakly similar to (87.0) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDweakly similar to ( 130) TRAC9_MAIZE Putative AC9 transposase - Zea mays (Maize) hATC protein|transposon protein, putative, unclassified, expressed",1.3889304,{"$nulls":8},26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0510400","Transcript","moderately similar to ( 258) AT3G21800 | Symbols: UGT71B8 | UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr3:7680243-7681685 REVERSEweakly similar to ( 143) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|anthocyanidin 5,3-O-glucosyltransferase, putative, expressed",6.042833,null,"1.3.4","PS.calvin cycle.GAP","Os03g0129300","Transcript","highly similar to ( 529) AT1G42970 | Symbols: GAPB | GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | chr1:16127552-16129584 FORWARDhighly similar to ( 511) G3PB_SPIOL Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Spinacia oleracea (Spinach) PRK07403 PRK07729 GapA PRK08955 PRK08289 Gp_dh_C Gp_dh_N protein|glyceraldehyde-3-phosphate dehydrogenase, putative, expressed",3.3167012,null,"Os04g0577300","GDSL-motif lipase",1.7216015,2.2838545,1.5497742,1.3598299,0.8328419,1.5104446,null,"Os01g0851600",{"$nulls":4},"Os04g0457000","OsCP24",0,0,0,5.642165,4.1956186,5.3929396]
[null,"1.3.5","PS.calvin cycle.TPI","Os09g0535000","Transcript","moderately similar to ( 268) AT2G21170 | Symbols: TIM | TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | chr2:9071047-9073106 REVERSEmoderately similar to ( 298) TPIC_SECCE Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) TIM TIM tpiA TpiA protein|triosephosphate isomerase, chloroplast precursor, putative, expressed",2.0614798,null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os11g0160600","Transcript","weakly similar to ( 114) AT4G08250 | Symbols: | scarecrow transcription factor family protein | chr4:5196787-5198238 FORWARDweakly similar to ( 120) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|nodulation-signaling pathway 2 protein, putative, expressed",1.1880302,null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os03g0822100","Transcript","moderately similar to ( 266) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDmoderately similar to ( 254) TRA1_MAIZE Putative AC transposase (ORFA) - Zea mays (Maize) protein|transposon protein, putative, unclassified, expressed",1.5859027,null,"20.2.1","stress.abiotic.heat","Os02g0217900","Transcript","very weakly similar to (96.3) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 104) HSP21_PEA 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) HSP20 protein|hsp20/alpha crystallin family protein, putative, expressed",-3.372493,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0187500","Transcript","moderately similar to ( 214) AT2G15480 | Symbols: UGT73B5 | UGT73B5 (UDP-glucosyl transferase 73B5); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr2:6758817-6760452 FORWARDweakly similar to ( 132) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed",3.2025073,{"$nulls":8},"Os06g0286310","oxidases - copper, flavone etc.",{"$nulls":3},1.4166903,1.3627033,1.8222156,null,"Os04g0118100",{"$nulls":4},"Os04g0459500","H0219H12.1 protein.",0,0,0,6.7204475,5.5445814,6.6149683]
[null,"1.3.6","PS.calvin cycle.aldolase","Os06g0608700","Transcript","highly similar to ( 574) AT4G26530 | Symbols: | fructose-bisphosphate aldolase, putative | chr4:13391566-13392937 FORWARDhighly similar to ( 547) ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) Glycolytic FBP_aldolase_I_a COG3588 FBP_aldolase_I protein|fructose-bisphospate aldolase isozyme, putative, expressed",2.6601543,null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os05g0500600","Transcript","moderately similar to ( 281) AT3G49950 | Symbols: | scarecrow transcription factor family protein | chr3:18522570-18523802 FORWARDweakly similar to ( 126) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|MONOCULM 1, putative, expressed",2.6618528,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os08g0427700","Transcript","weakly similar to ( 138) AT4G27230 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding | chr4:13637515-13638325 REVERSEweakly similar to ( 142) H2A3_ORYSA Probable histone H2A.3 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|core histone H2A/H2B/H3/H4, putative, expressed",2.4794953,null,"20.2.1","stress.abiotic.heat","Os02g0526400","Transcript","highly similar to ( 855) AT5G51070 | Symbols: ERD1, CLPD | ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr5:20764479-20768481 FORWARDhighly similar to ( 647) CLPC_PEA ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) clpA clpC PRK10865 clpA AAA_2 protein|ERD1 protein, chloroplast precursor, putative, expressed",-2.2417166,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0805500","Transcript","moderately similar to ( 313) AT2G30140 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:12872200-12873691 FORWARDweakly similar to ( 154) IAAG_MAIZE Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) UDPGT protein|indole-3-acetate beta-glucosyltransferase, putative, expressed",1.6564116,null,"1.3.5","PS.calvin cycle.TPI","Os01g0841600","Transcript","moderately similar to ( 266) AT3G55440 | Symbols: ATCTIMC, TPI | TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | chr3:20553794-20556078 FORWARDmoderately similar to ( 284) TPIS_ORYSA Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Oryza sativa (Rice) TIM TIM tpiA TpiA protein|triosephosphate isomerase, cytosolic, putative, expressed",-1.489267,null,"Os02g0733300","Gluco-, Galacto- and mannosidases.endoGlucanase",1.966197,2.9236116,4.737515,1.4401693,2.2114968,1.8734608,null,"Os01g0924000","Ctokinin related",{"$nulls":3},"Os10g0536500","Serine carboxypeptidase, active site domain containing protein.",0,0,0,6.4250555,5.8309574,6.7570267]
[null,"1.3.6","PS.calvin cycle.aldolase","Os01g0905800","Transcript","highly similar to ( 598) AT2G36460 | Symbols: | fructose-bisphosphate aldolase, putative | chr2:15296929-15297732 REVERSEhighly similar to ( 670) ALF_ORYSA Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) Glycolytic FBP_aldolase_I_a COG3588 FBP_aldolase_I protein|fructose-bisphospate aldolase isozyme, putative, expressed",-0.97642773,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0198600","Transcript","very weakly similar to (99.0) AT4G36740 | Symbols: HB-5, ATHB40 | ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor | chr4:17314649-17316314 REVERSE protein|homeobox domain containing protein, expressed",1.6825858,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os01g0502700","Transcript","weakly similar to ( 143) AT5G02560 | Symbols: HTA12 | HTA12; DNA binding | chr5:575437-576456 FORWARDweakly similar to ( 147) H2A4_ORYSA Probable histone H2A.4 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",1.9363683,null,"20.2.1","stress.abiotic.heat","Os01g0875700","Transcript","moderately similar to ( 216) AT3G08910 | Symbols: | DNAJ heat shock protein, putative | chr3:2710402-2711811 REVERSEvery weakly similar to (90.5) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ protein|dnaJ domain containing protein, expressed",2.6231723,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0289900","Transcript","weakly similar to ( 173) AT3G16520 | Symbols: UGT88A1 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:5618847-5620833 REVERSEweakly similar to ( 111) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|anthocyanidin 3-O-glucosyltransferase, putative, expressed",7.8760147,null,"1.3.5","PS.calvin cycle.TPI","Os09g0535000","Transcript","moderately similar to ( 268) AT2G21170 | Symbols: TIM | TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | chr2:9071047-9073106 REVERSEmoderately similar to ( 298) TPIC_SECCE Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) TIM TIM tpiA TpiA protein|triosephosphate isomerase, chloroplast precursor, putative, expressed",2.0614798,null,"Os06g0712500","UDP glucosyl and glucoronyl transferases",0.57392836,1.5340238,1.5193863,1.4750214,1.4430709,1.7439504,null,"Os02g0220400",{"$nulls":4},"Os12g0292400","OsRBCS4",0,0,0,7.788579,6.0593376,6.1049204]
[null,"1.3.7","PS.calvin cycle.FBPase","Os03g0267300","Transcript","highly similar to ( 602) AT3G54050 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr3:20016951-20018527 FORWARDhighly similar to ( 729) F16P1_ORYSA Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) FBPase PRK09293 Fbp FBPase protein|fructose-1,6-bisphosphatase, putative, expressed",2.447728,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os04g0548700","Transcript","weakly similar to ( 184) AT4G16780 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | chr4:9449291-9450604 FORWARD protein|homeobox associated leucine zipper, putative, expressed",2.2563107,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0162200","Transcript","weakly similar to ( 182) AT3G54560 | Symbols: HTA11 | HTA11; DNA binding | chr3:20196532-20197466 FORWARDweakly similar to ( 189) H2AV1_ORYSA Probable histone H2A variant 1 - Oryza sativa (Rice) H2A H2A HTA1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",4.3823657,null,"20.2.1","stress.abiotic.heat","Os01g0180800","Transcript","nearly identical (1130) AT1G79920 | Symbols: | ATP binding | chr1:30058935-30062224 REVERSEmoderately similar to ( 273) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 DnaK dnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2255234,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os05g0527000","Transcript","moderately similar to ( 308) AT3G16520 | Symbols: UGT88A1 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:5618847-5620833 REVERSEweakly similar to ( 162) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|anthocyanidin 5,3-O-glucosyltransferase, putative, expressed",-3.971136,{"$nulls":8},"Os01g0544200","cytochrome P450",{"$nulls":3},1.4988441,1.8838396,2.5896068,null,"Os03g0125000",{"$nulls":4},"Os12g0291400","OsRBCS5",0,0,0,7.4677577,6.4137826,7.361939]
[null,"1.3.7","PS.calvin cycle.FBPase","Os06g0664200","Transcript","highly similar to ( 506) AT5G64380 | Symbols: | fructose-1,6-bisphosphatase family protein | chr5:25741342-25743024 FORWARDmoderately similar to ( 268) F16P1_SPIOL Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) FBPase PRK09293 FBPase Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",3.7274342,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os05g0455200","Transcript","moderately similar to ( 216) AT5G02030 | Symbols: LSN, PNY, HB-6, BLR, RPL, BLH9, VAN | RPL (REPLUMLESS); DNA binding / sequence-specific DNA binding / transcription factor | chr5:395754-398872 FORWARD POX POX protein|homeodomain protein, putative, expressed",1.769432,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os08g0490900","Transcript","weakly similar to ( 155) AT5G22880 | Symbols: H2B, HTB2 | HTB2; DNA binding | chr5:7652130-7652567 REVERSEweakly similar to ( 157) H2B1_WHEAT Histone H2B.1 - Triticum aestivum (Wheat) H2B protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.2702293,null,"20.2.1","stress.abiotic.heat","Os01g0702500","Transcript","moderately similar to ( 387) AT2G21510 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:9210841-9212699 REVERSEmoderately similar to ( 270) DHR25_ORYSA Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1) - Oryza sativa (Rice) DnaJ Dehydrin DnaJ DnaJ protein|dehydrin family protein, expressed",1.8170567,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os09g0531900","Transcript","highly similar to ( 913) AT3G61130 | Symbols: GAUT1, LGT1 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr3:22622399-22625514 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.6780645,null,"1.3.6","PS.calvin cycle.aldolase","Os06g0608700","Transcript","highly similar to ( 574) AT4G26530 | Symbols: | fructose-bisphosphate aldolase, putative | chr4:13391566-13392937 FORWARDhighly similar to ( 547) ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) Glycolytic FBP_aldolase_I_a COG3588 FBP_aldolase_I protein|fructose-bisphospate aldolase isozyme, putative, expressed",2.6601543,null,"Os02g0635000","nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases",{"$nulls":3},1.5037613,0.8261504,1.4909515,null,"Os03g0267300"]
[null,"1.3.7","PS.calvin cycle.FBPase","Os05g0438600","Transcript","moderately similar to ( 481) AT1G43670 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr1:16468184-16470347 FORWARDhighly similar to ( 528) F16P2_SACHY Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Saccharum hybrid (Sugarcane) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",1.2552519,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os10g0480200","Transcript","highly similar to ( 693) AT5G60690 | Symbols: REV, IFL, IFL1 | REV (REVOLUTA); DNA binding / lipid binding / transcription factor | chr5:24397734-24401933 FORWARDSTART START START protein|START domain containing protein, expressed",0.966623,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0279200","Transcript","weakly similar to ( 143) AT5G02560 | Symbols: HTA12 | HTA12; DNA binding | chr5:575437-576456 FORWARDweakly similar to ( 147) H2A4_ORYSA Probable histone H2A.4 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.407467,null,"20.2.1","stress.abiotic.heat","Os01g0136100","Transcript","weakly similar to ( 165) AT5G59720 | Symbols: HSP18.2 | HSP18.2 (heat shock protein 18.2) | chr5:24062632-24063117 FORWARDmoderately similar to ( 224) HSP11_ORYSA 16.9 kDa class I heat shock protein 1 - Oryza sativa (Rice) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",0.9654362,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0556500","Transcript","weakly similar to ( 170) AT2G31750 | Symbols: UGT74D1 | UGT74D1 (UDP-glucosyl transferase 74D1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:13497312-13499870 FORWARDhighly similar to ( 628) CZOG1_MAIZE Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) protein|cis-zeatin O-glucosyltransferase, putative, expressed",-1.454739,null,"1.3.6","PS.calvin cycle.aldolase","Os01g0905800","Transcript","highly similar to ( 598) AT2G36460 | Symbols: | fructose-bisphosphate aldolase, putative | chr2:15296929-15297732 REVERSEhighly similar to ( 670) ALF_ORYSA Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) Glycolytic FBP_aldolase_I_a COG3588 FBP_aldolase_I protein|fructose-bisphospate aldolase isozyme, putative, expressed",-0.97642773,null,"Os03g0140100","cytochrome P450",{"$nulls":3},1.5152731,1.3553629,2.6930733,null,"Os03g0299900"]
[null,"1.3.7","PS.calvin cycle.FBPase","Os01g0866400","Transcript","highly similar to ( 529) AT1G43670 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr1:16468184-16470347 FORWARDhighly similar to ( 615) F16P2_ORYSA Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",2.356459,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os06g0140700","Transcript","weakly similar to ( 155) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE protein|homeobox associated leucine zipper, putative, expressed",1.2395021,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os12g0530000","Transcript","weakly similar to ( 149) AT1G54690 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding | chr1:20414607-20415206 REVERSEweakly similar to ( 166) H2AXB_ORYSA Probable histone H2AXb - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",0.9678197,null,"20.2.1","stress.abiotic.heat","Os02g0115900","Transcript","highly similar to ( 992) AT5G42020 | Symbols: BIP | BIP2; ATP binding | chr5:16807697-16810480 REVERSEnearly identical (1068) BIP3_MAIZE Luminal-binding protein 3 precursor (BiP3) - Zea mays (Maize) HSP70 dnaK DnaK dnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.0845118,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0613700","Transcript","highly similar to ( 695) AT1G31070 | Symbols: | UDP-N-acetylglucosamine pyrophosphorylase-related | chr1:11084951-11088361 FORWARD COG4284 UDPGP protein|UTP--glucose-1-phosphate uridylyltransferase, putative, expressed",1.5049185,{"$nulls":8},"Os01g0130400","Gluco-, Galacto- and mannosidases.alpha-Galactosidase",{"$nulls":3},1.530447,2.175294,1.5268831,null,"Os03g0315800"]
[null,"1.3.8","PS.calvin cycle.transketolase","Os06g0133800","Transcript","nearly identical (1211) AT2G45290 | Symbols: | transketolase, putative | chr2:18672737-18675589 FORWARDnearly identical (1292) TKTC_MAIZE Transketolase, chloroplast (EC 2.2.1.1) (TK) - Zea mays (Maize) TktA PRK05899 PRK12753 PRK12754 Transketolase_N TPP_TK COG3959 Transket_pyr COG3958 protein|transketolase, chloroplast precursor, putative, expressed",2.580087,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os08g0481400","Transcript","weakly similar to ( 144) AT5G65310 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor | chr5:26102457-26103854 REVERSE protein|homeobox associated leucine zipper, putative, expressed",0.97592384,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os09g0433600","Transcript","weakly similar to ( 135) AT5G59970 | Symbols: | histone H4 | chr5:24146352-24146663 REVERSEweakly similar to ( 135) H4_PEA Histone H4 - Pisum sativum (Garden pea) H4 H4 HHT1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",1.1256065,null,"20.2.1","stress.abiotic.heat","Os12g0514500","Transcript","highly similar to ( 979) AT3G07770 | Symbols: | ATP binding | chr3:2479611-2483970 FORWARDhighly similar to ( 516) HSP83_IPONI Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PRK05218 HtpG HSP90 protein|heat shock protein, putative, expressed",-1.598486,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0530900","Transcript","moderately similar to ( 341) AT1G13250 | Symbols: GATL3 | GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr1:4528965-4530002 REVERSEGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",2.4195888,null,"1.3.7","PS.calvin cycle.FBPase","Os03g0267300","Transcript","highly similar to ( 602) AT3G54050 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr3:20016951-20018527 FORWARDhighly similar to ( 729) F16P1_ORYSA Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) FBPase PRK09293 Fbp FBPase protein|fructose-1,6-bisphosphatase, putative, expressed",2.447728,null,"Os06g0681600","Peroxidases",2.5569782,2.1355572,2.1680765,1.541985,1.1789479,2.2438436,null,"Os04g0659100"]
[null,"1.3.9","PS.calvin cycle.seduheptulose bisphosphatase","Os04g0234600","Transcript","highly similar to ( 585) AT3G55800 | Symbols: SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase | chr3:20709640-20711421 FORWARDhighly similar to ( 726) S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Triticum aestivum (Wheat) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",3.3669853,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os09g0447000","Transcript","weakly similar to ( 176) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE HALZ protein|homeobox associated leucine zipper, putative, expressed",-1.1042371,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os04g0583600","Transcript","weakly similar to ( 135) AT5G59970 | Symbols: | histone H4 | chr5:24146352-24146663 REVERSEweakly similar to ( 135) H4_PEA Histone H4 - Pisum sativum (Garden pea) H4 H4 HHT1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.759118,null,"20.2.1","stress.abiotic.heat","Os01g0606900","Transcript","weakly similar to ( 120) AT1G71000 | Symbols: | heat shock protein binding | chr1:26769336-26770111 REVERSE DnaJ DnaJ protein|heat shock protein DnaJ, putative, expressed",-1.5562181,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os05g0500000","Transcript","moderately similar to ( 218) AT4G34131 | Symbols: UGT73B3 | UGT73B3 (UDP-glucosyl transferase 73B3); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring hexosyl groups | chr4:16343268-16344713 REVERSEweakly similar to ( 153) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed",5.281033,null,"1.3.7","PS.calvin cycle.FBPase","Os06g0664200","Transcript","highly similar to ( 506) AT5G64380 | Symbols: | fructose-1,6-bisphosphatase family protein | chr5:25741342-25743024 FORWARDmoderately similar to ( 268) F16P1_SPIOL Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) FBPase PRK09293 FBPase Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",3.7274342,null,"Os08g0105800","cytochrome P450",{"$nulls":3},1.5611157,1.5191569,1.0600677,null,"Os04g0683700"]
[null,"1.3.12","PS.calvin cycle.PRK","Os02g0698000","Transcript","highly similar to ( 674) AT1G32060 | Symbols: PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding | chr1:11532668-11534406 FORWARDhighly similar to ( 775) KPPR_WHEAT Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) PRK PRK07429 PRK Udk PRK05480 UMPK protein|phosphoribulokinase/Uridine kinase family protein, expressed",2.9928296,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0123500","Transcript","moderately similar to ( 368) AT1G62990 | Symbols: KNAT7, IXR11 | KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor | chr1:23337468-23340348 FORWARDmoderately similar to ( 360) HD1_BRANA Homeobox protein HD1 - Brassica napus (Rape) protein|homeobox protein knotted-1, putative, expressed",3.811927,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0852300","Transcript","very weakly similar to (82.0) AT1G07980 | Symbols: NF-YC10 | NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | chr1:2473523-2474910 REVERSE protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.1165094,null,"20.2.1","stress.abiotic.heat","Os02g0181900","Transcript","nearly identical (1317) AT2G25140 | Symbols: HSP98.7, CLPB-M, CLPB4 | CLPB4 (CASEIN LYTIC PROTEINASE B4); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr2:10697877-10701998 REVERSEhighly similar to ( 719) HS101_ORYSA Heat shock protein 101 - Oryza sativa (Rice) clpA PRK10865 clpC clpA AAA_2 protein|chaperone protein clpB 1, putative, expressed",-2.0256364,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0926600","Transcript","highly similar to ( 709) AT5G61840 | Symbols: GUT1 | GUT1; catalytic/ glucuronoxylan glucuronosyltransferase | chr5:24839365-24841703 REVERSE Exostosin protein|exostosin family domain containing protein, expressed",2.0889995,null,"1.3.7","PS.calvin cycle.FBPase","Os05g0438600","Transcript","moderately similar to ( 481) AT1G43670 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr1:16468184-16470347 FORWARDhighly similar to ( 528) F16P2_SACHY Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Saccharum hybrid (Sugarcane) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",1.2552519,null,"Os09g0533900","Gluco-, Galacto- and mannosidases.endoGlucanase",2.8422318,4.319895,4.401554,1.5732474,1.3657346,2.473496,null,"Os07g0176900"]
[null,"1.3.13","PS.calvin cycle.rubisco interacting","Os11g0707100","Transcript","weakly similar to ( 180) AT2G39730 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | chr2:16571174-16573345 REVERSEmoderately similar to ( 219) RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) protein|expressed protein",2.6541064,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0124000","Transcript","moderately similar to ( 241) AT5G41410 | Symbols: BEL1 | BEL1 (BELL 1); DNA binding / protein binding / transcription factor | chr5:16580424-16583770 FORWARD POX POX protein|homeobox domain containing protein, expressed",-1.0684227,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os04g0253000","Transcript","protein|histone H1, putative, expressed",1.304377,null,"20.2.1","stress.abiotic.heat","Os02g0464900","Transcript","moderately similar to ( 219) AT5G57130 | Symbols: | protein binding | chr5:23145291-23149395 FORWARD protein|ATP binding, related, putative, expressed",1.4324527,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os11g0461200","Transcript","moderately similar to ( 253) AT5G54010 | Symbols: | glycosyltransferase family protein | chr5:21919819-21921180 REVERSEmoderately similar to ( 421) UFOG_PETHY Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",2.7140121,null,"1.3.7","PS.calvin cycle.FBPase","Os01g0866400","Transcript","highly similar to ( 529) AT1G43670 | Symbols: | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | chr1:16468184-16470347 FORWARDhighly similar to ( 615) F16P2_ORYSA Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",2.356459,null,"Os02g0833900","Peroxidases",2.6536055,5.490188,7.101985,1.5840139,2.9091134,5.166922,null,"Os08g0242700"]
[null,"1.3.13","PS.calvin cycle.rubisco interacting","Os09g0411650","Transcript","highly similar to ( 513) AT1G14030 | Symbols: | ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative | chr1:4805493-4807440 REVERSEhighly similar to ( 509) RBCMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) Rubis-subs-bind protein|ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed",1.2457805,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os01g0788800","Transcript","moderately similar to ( 326) AT4G21750 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA binding / sequence-specific DNA binding / transcription factor | chr4:11556965-11560243 FORWARDSTART START protein|Homeobox domain containing protein, expressed",1.2033843,null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os06g0160100","Transcript","weakly similar to ( 189) AT4G40030 | Symbols: | histone H3.2 | chr4:18555840-18556417 REVERSEweakly similar to ( 180) H32_WHEAT Histone H3.2 - Triticum aestivum (Wheat) H3 Histone HHT1 protein|histone H3, putative, expressed",2.2025268,null,"20.2.1","stress.abiotic.heat","Os08g0250900","Transcript","highly similar to ( 524) AT5G57710 | Symbols: | heat shock protein-related | chr5:23384794-23388052 FORWARD clpA protein|heat shock protein-related, putative, expressed",-1.0348444,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0510500","Transcript","moderately similar to ( 249) AT3G21790 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:7676927-7678414 REVERSEweakly similar to ( 145) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",5.8879046,{"$nulls":8},"Os04g0477500","Gluco-, Galacto- and mannosidases",{"$nulls":3},1.606761,0.9163537,1.5186849,null,"Os11g0106700"]
[{"$nulls":8},"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046,{"$nulls":8},"20.2.1","stress.abiotic.heat","Os01g0184100","Transcript","weakly similar to ( 133) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 170) HSP21_MAIZE 17.5 kDa class II heat shock protein - Zea mays (Maize) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",-1.986811,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os03g0300900","Transcript","moderately similar to ( 499) AT3G62660 | Symbols: GATL7 | GATL7 (Galacturonosyltransferase-like 7); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr3:23173419-23174504 FORWARDGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",1.697187,null,"1.3.9","PS.calvin cycle.seduheptulose bisphosphatase","Os04g0234600","Transcript","highly similar to ( 585) AT3G55800 | Symbols: SBPASE | SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase | chr3:20709640-20711421 FORWARDhighly similar to ( 726) S17P_WHEAT Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Triticum aestivum (Wheat) FBPase FBPase PRK09293 Fbp protein|fructose-1,6-bisphosphatase, putative, expressed",3.3669853,null,"Os06g0683300","Gluco-, Galacto- and mannosidases",1.2503376,1.1415176,1.5560246,1.6407819,1.7922177,1.4117951,null,"Os12g0106000"]
[null,13,"amino acid metabolism","Os12g0152700","Transcript","moderately similar to ( 302) AT5G04740 | Symbols: | ACT domain-containing protein | chr5:1368713-1371391 REVERSE protein|ACT domain containing protein, expressed",-1.23023,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os05g0530400","Transcript","weakly similar to ( 197) AT4G18880 | Symbols: AT-HSFA4A, HSF A4A | AT-HSFA4A; DNA binding / transcription factor | chr4:10347769-10349051 REVERSE HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.9081851,null,31.1,"cell.organisation","Os09g0528000","Transcript","highly similar to ( 652) AT2G21300 | Symbols: | kinesin motor family protein | chr2:9114396-9118292 REVERSEmoderately similar to ( 214) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KIP3_like KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_KIF4 KISc_KIF3 KISc_BimC_Eg5 KISc_C_terminal KISc_KIF2_like KISc_KLP2_like KIP1 KISc_KIF9_like KISc_KID_like KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, expressed",1.7737902,null,"20.2.1","stress.abiotic.heat","Os03g0293100","Transcript","moderately similar to ( 335) AT3G08970 | Symbols: ATERDJ3A, TMS1 | ATERDJ3A; oxidoreductase | chr3:2737589-2740265 FORWARD DnaJ DnaJ PRK10767 DnaJ SEC63 protein|heat shock protein DnaJ, putative, expressed",1.5868534,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0176000","Transcript","moderately similar to ( 429) AT2G36770 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:15415227-15416717 REVERSEweakly similar to ( 186) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed",-2.8266761,{"$nulls":8},"Os09g0531900","UDP glucosyl and glucoronyl transferases",0.99497414,1.700305,1.625257,1.6578126,1.4366751,1.9397058]
[null,13,"amino acid metabolism","Os08g0242700","Transcript","moderately similar to ( 310) AT1G16880 | Symbols: | uridylyltransferase-related | chr1:5773796-5775272 FORWARD protein|uridylyltransferase-related, putative, expressed",3.1629536,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0749300","Transcript","moderately similar to ( 237) AT5G45710 | Symbols: AT-HSFA4C, RHA1, HSFA4C | RHA1 (ROOT HANDEDNESS 1); DNA binding / transcription factor | chr5:18541576-18542706 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.2446251,null,31.1,"cell.organisation","Os12g0639600","Transcript","highly similar to ( 572) AT1G74790 | Symbols: | catalytic | chr1:28098912-28101673 FORWARD protein|expressed protein",0.970218,null,"20.2.1","stress.abiotic.heat","Os09g0482600","Transcript","nearly identical (1079) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1179) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.0954514,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0201100","Transcript","moderately similar to ( 441) AT3G15350 | Symbols: | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein | chr3:5167250-5168882 FORWARD Branch protein|xylosyltransferase, putative, expressed",-1.3511261,null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0274700","Transcript","moderately similar to ( 218) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 325) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",4.865291,null,"Os05g0129200","Gluco-, Galacto- and mannosidases.endoGlucanase",{"$nulls":3},1.6606145,1.6433582,2.7700253]
[null,"13.1.1.1.1","amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase","Os03g0720300","Transcript","highly similar to ( 874) AT5G17330 | Symbols: GAD, GAD1 | GAD; calmodulin binding / glutamate decarboxylase | chr5:5711141-5714839 FORWARDhighly similar to ( 859) DCE_PETHY Glutamate decarboxylase (EC 4.1.1.15) (GAD) - Petunia hybrida (Petunia) GadB Pyridoxal_deC protein|glutamate decarboxylase, putative, expressed",1.5257059,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0733200","Transcript","weakly similar to ( 179) AT3G24520 | Symbols: AT-HSFC1, HSFC1 | AT-HSFC1; DNA binding / transcription factor | chr3:8941455-8942531 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.5364038,null,31.1,"cell.organisation","Os01g0946100","Transcript","moderately similar to ( 373) AT3G51930 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:19271672-19272919 FORWARD WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",1.87547,null,"20.2.1","stress.abiotic.heat","Os09g0491772","Transcript","highly similar to ( 838) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 840) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA protein|DnaK family protein, putative, expressed",-2.79547,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0636100","Transcript","highly similar to ( 645) AT2G20810 | Symbols: GAUT10, LGT4 | GAUT10 (GALACTURONOSYLTRANSFERASE 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:8957927-8959610 FORWARDGlyco_transf_8 protein|glycosyl transferase 8 domain containing protein, putative, expressed",-1.0413266,null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0291400","Transcript","moderately similar to ( 238) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 364) RBS2_ORYSA Ribulose bisphosphate carboxylase small chain A, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",7.0811596,null,"Os03g0135100","Glutathione S transferases",{"$nulls":3},1.6886497,3.2109232,5.750858]
[null,"13.1.1.3.1","amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase","Os10g0390600","Transcript","highly similar to ( 606) AT1G72330 | Symbols: ALAAT2 | ALAAT2 (ALANINE AMINOTRANSFERASE 2); ATP binding / L-alanine:2-oxoglutarate aminotransferase | chr1:27233637-27236191 FORWARDhighly similar to ( 636) ALA2_HORVU Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) COG0436 PRK09265 PRK08363 PRK05764 Aminotran_1_2 PRK06855 PRK07568 PRK06056 PRK07682 PRK06375 PRK06836 PRK07367 PRK05794 protein|aminotransferase, classes I and II, domain containing protein, expressed",3.8806279,null,"27.3.24","RNA.regulation of transcription.MADS box transcription factor family","Os06g0712700","Transcript","weakly similar to ( 179) AT3G54340 | Symbols: AP3, ATAP3 | AP3 (APETALA 3); DNA binding / transcription factor | chr3:20119428-20121087 REVERSEmoderately similar to ( 402) MAD16_ORYSA MADS-box transcription factor 16 (OsMADS16) (Protein SUPERWOMAN1) (Protein APETALA3-like) - Oryza sativa (Rice) MADS_MEF2_like MADS MADS K-box MADS_SRF_like SRF-TF protein|OsMADS16 - MADS-box family gene with MIKCc type-box, expressed",1.468964,null,31.1,"cell.organisation","Os07g0506600","Transcript","weakly similar to ( 197) AT3G05270 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink). | chr3:1500803-1502926 REVERSEDUF869 protein|retrotransposon protein, putative, unclassified, expressed",2.7770789,null,"20.2.1","stress.abiotic.heat","Os11g0703900","Transcript","highly similar to ( 934) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEhighly similar to ( 937) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2799143,null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0176200","Transcript","moderately similar to ( 444) AT2G36780 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:15417618-15419108 REVERSEweakly similar to ( 181) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed",-1.3799456,null,"1.3.2","PS.calvin cycle.rubisco small subunit","Os12g0292400","Transcript","weakly similar to ( 194) AT1G67090 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | chr1:25048590-25049249 REVERSEmoderately similar to ( 273) RBS1_ORYSA Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (Ribulose bisphosphate carboxylase small chain C) (RuBisCO small subunit C) - Oryza sativa (Rice)RuBisCO_small RuBisCO_small rbcS RbcS protein|ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed",6.6509457,null,"Os04g0474800","Gluco-, Galacto- and mannosidases",{"$nulls":3},1.7558861,1.3865252,1.1618366]
[null,"13.1.1.3.11","amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine-glyoxylate aminotransferase","Os03g0171900","Transcript","highly similar to ( 764) AT4G39660 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | chr4:18406797-18409262 FORWARDvery weakly similar to (91.3) GSA_ORYSA Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) PRK06148 GabT PRK06149 ArgD BioA PRK08117 Aminotran_3 PRK08555 PRK08593 argD PRK06062 PRK07678 PRK07481 PRK05769 PRK03711 PRK08360 PRK07483 PRK07323 PRK07036 PRK07480 PRK08088 argD PRK06918 PRK06105 PRK07495 PRK06938 PRK07482 argD PRK06541 PRK06917 PRK02627 PRK06931 PRK05965 PRK06058 PRK12381 PRK06082 PRK04260 PRK05639 PRK06916 argD argD rocD PRK09221 PRK11522 argD argD rocD PRK06777 PRK09264 PRK12403 PRK07030 PRK09792 PRK00062 HemL PRK08466 PRK08742 PRK08297 PRK06943 PRK05964 PRK12389 PRK09044 PRK07986 PRK06173 PRK06942 PRK00615 PRK05630 PRK07894 protein|aminotransferase, putative, expressed",1.9032122,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927,null,31.1,"cell.organisation","Os08g0258200","Transcript","moderately similar to ( 467) AT5G57740 | Symbols: XBAT32 | XBAT32; protein binding / zinc ion binding | chr5:23394789-23397145 REVERSE ANK protein|ankyrin repeat-rich protein, putative, expressed",-0.98293716,null,"20.2.1","stress.abiotic.heat","Os05g0460000","Transcript","nearly identical (1105) AT3G12580 | Symbols: HSP70 | HSP70 (heat shock protein 70); ATP binding | chr3:3991487-3993689 REVERSEnearly identical (1113) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.8242869,{"$nulls":15},"Os01g0214600","GDSL-motif lipase",{"$nulls":3},1.7776475,2.0406284,3.49114]
[null,"13.1.2.2","amino acid metabolism.synthesis.glutamate family.proline","Os01g0848200","Transcript","highly similar to ( 957) AT3G55610 | Symbols: P5CS2 | P5CS2 (DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2); catalytic/ glutamate 5-kinase/ oxidoreductase | chr3:20625005-20628989 REVERSEnearly identical (1107) P5CS_ORYSA Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- ProA AAK_P5CS_ProBA proA AAK_G5K_ProB PRK05429 PRK12314 ProB AA_kinase AAK protein|amino acid kinase, putative, expressed",2.543742,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0769900","Transcript","moderately similar to ( 437) AT1G05750 | Symbols: PDE247, CLB19 | PDE247 (pigment defective 247) | chr1:1721523-1723025 FORWARDvery weakly similar to (99.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.1371251,null,31.1,"cell.organisation","Os01g0760000","Transcript","weakly similar to ( 144) AT1G52240 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | chr1:19458844-19459235 REVERSEvery weakly similar to (82.8) DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii Dynein_light protein|dynein light chain type 1 domain containing protein, expressed",3.341468,null,"20.2.1","stress.abiotic.heat","Os05g0156500","Transcript","moderately similar to ( 496) AT3G62600 | Symbols: ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding | chr3:23151038-23153346 REVERSEweakly similar to ( 173) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ PRK10266 DnaJ_C DnaJ CbpA protein|dnaJ homolog subfamily B member 11 precursor, putative, expressed",-1.0589027,null,26.9,"misc.glutathione S transferases","Os03g0785900","Transcript","weakly similar to ( 180) AT1G78380 | Symbols: ATGSTU19, GST8 | ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase | chr1:29486659-29487819 REVERSEmoderately similar to ( 367) GSTU1_ORYSA Probable glutathione S-transferase GSTU1 (EC 2.5.1.18) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-4.12553,null,"1.3.13","PS.calvin cycle.rubisco interacting","Os11g0707100","Transcript","weakly similar to ( 180) AT2G39730 | Symbols: RCA | RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | chr2:16571174-16573345 REVERSEmoderately similar to ( 219) RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) protein|expressed protein",2.6541064,null,"Os01g0371500","Glutathione S transferases",{"$nulls":3},1.7783012,1.5227532,1.9825773]
[null,"13.1.2.2","amino acid metabolism.synthesis.glutamate family.proline","Os05g0455500","Transcript","highly similar to ( 997) AT2G39800 | Symbols: P5CS1, ATP5CS | P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase | chr2:16598516-16602939 REVERSEnearly identical (1335) P5CS_ORYSA Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- ProA AAK_P5CS_ProBA proA AAK_G5K_ProB PRK05429 PRK12314 ProB AA_kinase AAK protein|amino acid kinase, putative, expressed",1.34377,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0552300","Transcript","highly similar to ( 946) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEweakly similar to ( 128) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.8654522,null,31.1,"cell.organisation","Os11g0170200","Transcript","weakly similar to ( 172) AT1G77580 | Symbols: | myosin heavy chain-related | chr1:29144632-29146600 REVERSE DUF869 protein|myosin heavy chain-related, putative, expressed",1.4816203,null,"20.2.1","stress.abiotic.heat","Os03g0648400","Transcript","highly similar to ( 550) AT3G44110 | Symbols: ATJ3, ATJ | ATJ3; protein binding | chr3:15869179-15871059 REVERSEhighly similar to ( 586) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ_CXXCXGXG DnaJ DnaJ PRK10266 protein|chaperone protein dnaJ, putative, expressed",-1.0908371,null,26.9,"misc.glutathione S transferases","Os01g0949700","Transcript","weakly similar to ( 174) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEweakly similar to ( 172) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.6883936,null,"1.3.13","PS.calvin cycle.rubisco interacting","Os09g0411650","Transcript","highly similar to ( 513) AT1G14030 | Symbols: | ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative | chr1:4805493-4807440 REVERSEhighly similar to ( 509) RBCMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) Rubis-subs-bind protein|ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed",1.2457805,null,"Os07g0517900","cytochrome P450",{"$nulls":3},1.8047957,1.4819264,3.3335533]
[null,"13.1.2.3.2","amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase","Os04g0550500","Transcript","moderately similar to ( 345) AT3G57560 | Symbols: | aspartate/glutamate/uridylate kinase family protein | chr3:21311164-21312207 REVERSE AAK_NAGK-C AAK_NAGK-like PRK00942 ArgB PRK05279 AAK_NAGS-ABP AA_kinase AAK_NAGK-UC AAK_NAGK-NC AAK_NAGK-fArgBP PRK04531 AAK protein|amino acid kinase, putative, expressed",1.1363305,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0844000","Transcript","moderately similar to ( 445) AT2G27610 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:11783927-11786533 REVERSEweakly similar to ( 127) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.7728684,null,31.1,"cell.organisation","Os02g0663800","Transcript","moderately similar to ( 223) AT1G01750 | Symbols: ADF11 | ADF11 (ACTIN DEPOLYMERIZING FACTOR 11); actin binding | chr1:275528-276126 FORWARDmoderately similar to ( 236) ADF_LILLO Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) ADF ADF Cofilin_ADF protein|actin-depolymerizing factor, putative, expressed",-2.0188782,null,"20.2.1","stress.abiotic.heat","Os01g0239100","Transcript","moderately similar to ( 373) AT2G20560 | Symbols: | DNAJ heat shock family protein | chr2:8848353-8849815 REVERSEvery weakly similar to (94.7) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ PRK10266 CbpA protein|dnaJ domain containing protein, expressed",-1.1356636,null,26.9,"misc.glutathione S transferases","Os10g0527800","Transcript","weakly similar to ( 180) AT1G10360 | Symbols: ATGSTU18, GST29 | ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase | chr1:3395738-3396806 REVERSEweakly similar to ( 191) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.9627552,{"$nulls":8},"Os02g0101400","GDSL-motif lipase",{"$nulls":3},1.8074374,0.8155861,1.050005]
[null,"13.1.3.4","amino acid metabolism.synthesis.aspartate family.methionine","Os10g0422200","Transcript","moderately similar to ( 452) AT3G63250 | Symbols: HMT-2, ATHMT-2, HMT2 | HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2); homocysteine S-methyltransferase | chr3:23370575-23372587 REVERSEmoderately similar to ( 457) HMT3_MAIZE Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (ZmHMT-3) - Zea mays (Maize) mmuM S-methyl_trans MHT1 MetH PRK08645 protein|homocysteine S-methyltransferase protein, putative, expressed",-0.9726977,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0241800","Transcript","highly similar to ( 666) AT3G49140 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1). | chr3:18213981-18217848 REVERSEvery weakly similar to (95.1) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.5820802,null,31.1,"cell.organisation","Os04g0571300","Transcript","weakly similar to ( 159) AT3G61060 | Symbols: AtPP2-A13 | AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13); carbohydrate binding | chr3:22603166-22604336 FORWARD protein|OsFBX148 - F-box domain containing protein, expressed",2.1663525,null,"20.2.1","stress.abiotic.heat","Os09g0482100","Transcript","nearly identical (1062) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1157) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2360722,null,26.9,"misc.glutathione S transferases","Os01g0949750","Transcript","moderately similar to ( 204) AT2G29420 | Symbols: ATGSTU7, GST25 | ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase | chr2:12618111-12618871 REVERSEmoderately similar to ( 222) GSTX1_TOBAC Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.3416748,null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os04g0107300","Transcript","moderately similar to ( 225) AT2G45630 | Symbols: | oxidoreductase family protein | chr2:18796000-18797089 FORWARD LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK07574 PRK06487 PRK06932 PRK11790 PRK06436 PRK00257 PRK08605 PRK12480 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.3097124,null,"Os06g0203200","oxidases - copper, flavone etc.",2.4645343,3.1748195,3.6735682,1.8189602,2.519631,3.1232438]
[null,"13.1.3.4","amino acid metabolism.synthesis.aspartate family.methionine","Os12g0607000","Transcript","moderately similar to ( 346) AT3G63250 | Symbols: HMT-2, ATHMT-2, HMT2 | HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2); homocysteine S-methyltransferase | chr3:23370575-23372587 REVERSEmoderately similar to ( 444) HMT2_MAIZE Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) - Zea mays (Maize) mmuM MHT1 S-methyl_trans MetH protein|homocysteine S-methyltransferase protein, putative, expressed",1.4469929,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0163600","Transcript","moderately similar to ( 479) AT4G15720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:8949569-8951419 FORWARD protein|tetratricopeptide-like helical, putative, expressed",-1.0337161,null,31.1,"cell.organisation","Os03g0246500","Transcript","highly similar to ( 567) AT1G19835 | Symbols: | unknown protein | chr1:6856212-6859513 REVERSEDUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",3.7885964,null,"20.2.1","stress.abiotic.heat","Os06g0716700","Transcript","nearly identical (1050) AT4G24190 | Symbols: SHD | SHD (SHEPHERD); ATP binding / unfolded protein binding | chr4:12551902-12555851 REVERSEnearly identical (1162) ENPL_HORVU Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2462469,null,26.9,"misc.glutathione S transferases","Os10g0530500","Transcript","weakly similar to ( 191) AT1G10370 | Symbols: GST30, ATGSTU17, GST30B, ERD9 | ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase | chr1:3397274-3398273 REVERSEmoderately similar to ( 210) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",5.0363126,null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os04g0106400","Transcript","moderately similar to ( 252) AT2G45630 | Symbols: | oxidoreductase family protein | chr2:18796000-18797089 FORWARD LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK06487 PRK07574 PRK06932 PRK11790 PRK12480 PRK08605 PRK06436 PRK00257 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.3684274,null,"Os12g0637400","acid and other phosphatases",5.074616,4.571771,2.4858418,1.8412466,2.8326206,3.0636272]
[null,"13.1.3.5.2","amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase","Os03g0118600","Transcript","moderately similar to ( 393) AT5G52100 | Symbols: crr1 | crr1 (chlororespiration reduction 1); dihydrodipicolinate reductase | chr5:21170203-21172107 FORWARDPRK00048 DapB DapB_C protein|dihydrodipicolinate reductase, putative, expressed",5.2110105,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0191500","Transcript","highly similar to ( 536) AT1G59720 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTION28); endonuclease | chr1:21939868-21941784 REVERSE protein|pentatricopeptide, putative, expressed",4.0154567,null,31.1,"cell.organisation","Os02g0269200","Transcript","weakly similar to ( 125) AT1G52240 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | chr1:19458844-19459235 REVERSE Dynein_light protein|dynein light chain type 1 domain containing protein, expressed",3.0136003,null,"20.2.1","stress.abiotic.heat","Os01g0840100","Transcript","nearly identical (1024) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEnearly identical (1038) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.5626196,null,26.9,"misc.glutathione S transferases","Os12g0210200","Transcript","moderately similar to ( 238) AT2G02390 | Symbols: ATGSTZ1, GST18 | ATGSTZ1 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE ZETA 1); catalytic/ glutathione transferase | chr2:629015-630955 FORWARDmoderately similar to ( 324) GSTZ_WHEAT Glutathione S-transferase (EC 2.5.1.18) (GST class-zeta) - Triticum aestivum (Wheat) GST_C_Zeta Gst GST_N_Zeta protein|glutathione S-transferase, putative, expressed",1.0485562,null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os01g0228600","Transcript","moderately similar to ( 347) AT1G79870 | Symbols: | oxidoreductase family protein | chr1:30044794-30045851 FORWARDvery weakly similar to (84.7) DHGY_CUCSA Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) LdhA 2-Hacid_dh SerA 2-Hacid_dh_C PRK08410 PRK11790 PRK06487 PRK07574 PRK06932 PRK12480 PRK06436 PRK08605 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",1.4682945,null,"Os12g0582000","cytochrome P450",{"$nulls":3},1.9045444,0.60985136,1.3308172]
[null,"13.1.3.5.3","amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase","Os03g0195100","Transcript","highly similar to ( 503) AT4G33680 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2); L,L-diaminopimelate aminotransferase/ transaminase | chr4:16171847-16174630 REVERSE PRK07590 COG0436 PRK09276 PRK08068 PRK07682 Aminotran_1_2 PRK06108 PRK07681 PRK05764 PRK08361 PRK09148 PRK07212 PRK05942 ARO8 HisC PRK07366 PRK06220 PRK07683 PRK07337 PRK08175 PRK06290 PRK06375 PRK08636 PRK08362 PRK07550 PRK06056 PRK05794 PRK09147 PRK07309 PRK06836 PRK07865 MalY PRK07324 PRK08069 PRK06507 PRK07778 PRK07367 protein|aminotransferase, classes I and II, domain containing protein, expressed",-1.845352,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0114150","Transcript","weakly similar to ( 149) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.5206258,null,31.1,"cell.organisation","Os12g0129700","Transcript","moderately similar to ( 201) AT2G02360 | Symbols: AtPP2-B10 | AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding | chr2:619699-620736 REVERSE protein|OsFBX437 - F-box domain containing protein, expressed",-2.2358558,null,"20.2.1","stress.abiotic.heat","Os08g0452900","Transcript","very weakly similar to (85.9) AT3G14200 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr3:4712881-4714361 REVERSEDnaJ protein|heat shock protein DnaJ, putative, expressed",-1.6592275,null,26.9,"misc.glutathione S transferases","Os09g0467200","Transcript","moderately similar to ( 201) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEmoderately similar to ( 206) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-1.392368,null,"1.2.6","PS.photorespiration.hydroxypyruvate reductase","Os02g0101500","Transcript","highly similar to ( 501) AT1G68010 | Symbols: HPR | HPR; glycerate dehydrogenase/ poly(U) binding | chr1:25493418-25495720 FORWARDmoderately similar to ( 481) DHGY_CUCSA Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) 2-Hacid_dh LdhA SerA 2-Hacid_dh_C PRK08410 PRK11790 PRK06487 PRK06932 PRK08605 PRK12480 PRK00257 PRK07574 PRK06436 protein|erythronate-4-phosphate dehydrogenase domain containing protein, expressed",2.1582224,null,"Os11g0461200","UDP glucosyl and glucoronyl transferases",{"$nulls":3},1.918952,2.1805072,4.0425777]
[null,"13.1.3.5.3","amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase","Os03g0299900","Transcript","highly similar to ( 702) AT4G33680 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2); L,L-diaminopimelate aminotransferase/ transaminase | chr4:16171847-16174630 REVERSE PRK07590 COG0436 PRK09276 PRK08068 PRK09148 PRK07681 PRK05942 PRK07682 PRK07337 PRK07212 PRK08636 PRK08361 PRK05764 Aminotran_1_2 PRK08175 PRK07366 PRK06108 PRK06220 PRK06290 PRK07683 PRK08362 PRK05794 PRK07778 PRK09147 HisC PRK06056 PRK06375 PRK07550 PRK07865 PRK07309 PRK08443 PRK06507 ARO8 PRK08960 PRK06348 MalY PRK06836 PRK08363 PRK07324 PRK07367 PRK09265 PRK08069 PRK06107 protein|aminotransferase, classes I and II, domain containing protein, expressed",1.0436913,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0172600","Transcript","highly similar to ( 677) AT5G03800 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE protein|pentatricopeptide, putative, expressed",1.0694861,null,31.1,"cell.organisation","Os03g0758400","Transcript","moderately similar to ( 264) AT2G03430 | Symbols: | ankyrin repeat family protein | chr2:1036192-1037536 REVERSEvery weakly similar to (89.7) AKT1_ORYSA Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) ANK protein|26S proteasome non-ATPase regulatory subunit 10, putative, expressed",1.0420647,null,"20.2.1","stress.abiotic.heat","Os03g0113700","Transcript","highly similar to ( 956) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 988) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.2001644,null,26.9,"misc.glutathione S transferases","Os12g0123200","Transcript","weakly similar to ( 150) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEweakly similar to ( 166) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau protein|glutathione S-transferase, putative, expressed",-0.99257296,{"$nulls":8},"Os10g0378100","cytochrome P450",2.3785753,2.8511324,1.9447975,1.9334292,2.2296538,2.333899]
[null,"13.1.4.1","amino acid metabolism.synthesis.branched chain group.common","Os01g0652600","Transcript","highly similar to ( 884) AT3G58610 | Symbols: | ketol-acid reductoisomerase | chr3:21671561-21674639 FORWARDhighly similar to ( 862) ILV5_SPIOL Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase) - Spinacia oleracea (Spinach)IlvC PRK05479 IlvN IlvC PRK05225 protein|ketol-acid reductoisomerase, chloroplast precursor, putative, expressed",-1.0777134,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0636900","Transcript","moderately similar to ( 467) AT2G29760 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12712884-12715100 FORWARDvery weakly similar to (99.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.0778502,null,31.1,"cell.organisation","Os03g0851700","Transcript","moderately similar to ( 347) AT4G35450 | Symbols: AKR2, AFT, AKR2A | AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding | chr4:16839862-16841759 FORWARD ANK protein|ankyrin repeat domain containing protein, expressed",1.7291578,null,"20.2.1","stress.abiotic.heat","Os03g0261500","Transcript","moderately similar to ( 215) AT5G22080 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7310600-7313540 REVERSE protein|heat shock protein DnaJ, putative, expressed",3.2925575,null,26.9,"misc.glutathione S transferases","Os10g0529300","Transcript","moderately similar to ( 213) AT1G10360 | Symbols: ATGSTU18, GST29 | ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase | chr1:3395738-3396806 REVERSEmoderately similar to ( 228) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",5.40127,null,"1.2.2","PS.photorespiration.glycolate oxydase","Os03g0786100","Transcript","highly similar to ( 612) AT3G14420 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4821899-4823899 FORWARDhighly similar to ( 610) GOX_SPIOL Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) FMN_dh alpha_hydroxyacid_oxid_FMN FCB2_FMN idi LOX_like_FMN LMO_FMN MDH_FMN lldD PRK05437 protein|hydroxyacid oxidase 1, putative, expressed",1.5200104,null,"Os07g0510200","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",1.0752168,1.4482303,0.9200244,1.9434433,1.2897301,2.34795]
[null,"13.1.4.1","amino acid metabolism.synthesis.branched chain group.common","Os02g0510200","Transcript","highly similar to ( 884) AT3G48560 | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1); acetolactate synthase/ pyruvate decarboxylase | chr3:18001530-18003542 REVERSEnearly identical (1156) ILV1_ORYSA Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetohydroxy-acid synthase 1) - Oryza sativa (Rice) PRK08978 PRK07789 PRK07418 IlvB PRK06048 ilvB PRK08527 PRK09107 PRK07710 PRK08155 PRK06725 PRK06276 PRK07282 PRK06466 PRK06965 PRK08979 PRK07979 PRK06882 PRK06456 PRK11269 PRK08322 TPP_AHAS COG3960 PRK08199 PRK06457 PRK07524 PRK08611 PRK08617 PRK09124 PRK08266 PRK06546 PRK07064 PRK06112 TPP_enzyme_N PRK07525 PRK08273 COG3962 PRK09259 PRK05858 TPP_enzyme_C PRK06154 PRK08327 TPP_enzyme_M TPP_enzymes COG3961 PRK07092 TPP_POX TPP_ALS TPP_BFDC TPP_BZL_OCoD_HPCL TPP_Gcl protein|thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed",1.0548363,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0697500","Transcript","highly similar to ( 546) AT1G31920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:11461864-11463684 REVERSEvery weakly similar to (80.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1643367,null,31.1,"cell.organisation","Os04g0629700","Transcript","highly similar to ( 719) AT4G05190 | Symbols: ATK5 | ATK5 (ARABIDOPSIS THALIANA KINESIN 5); microtubule motor | chr4:2675338-2679482 FORWARDweakly similar to ( 187) KLP1_CHLRE Kinesin-like protein KLP1 - Chlamydomonas reinhardtii KISc_C_terminal KISc Kinesin KISc KISc_KIF3 KISc_KIF4 KISc_KIF1A_KIF1B KISc_KHC_KIF5 KISc_CENP_E KISc_KIF9_like KISc_KIP3_like KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_KIF2_like KIP1 KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",6.459684,null,"20.2.1","stress.abiotic.heat","Os06g0474800","Transcript","very weakly similar to (87.8) AT5G23240 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826857-7828534 REVERSE protein|expressed protein",-1.9624877,null,26.9,"misc.glutathione S transferases","Os03g0135100","Transcript","weakly similar to ( 161) AT3G03190 | Symbols: ATGSTF11, ATGSTF6 | ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11); glutathione transferase | chr3:735071-735877 FORWARDweakly similar to ( 146) GSTF1_TOBAC Glutathione S-transferase PARB (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) GST_C_Phi Gst GST_N_Phi protein|glutathione S-transferase, putative, expressed",3.5501435,{"$nulls":8},"Os04g0530900","UDP glucosyl and glucoronyl transferases",{"$nulls":3},1.9733825,1.7410326,3.5443516]
[null,"13.1.4.1.1","amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase","Os02g0608600","Transcript","highly similar to ( 630) AT2G31810 | Symbols: | acetolactate synthase small subunit, putative | chr2:13524271-13528246 FORWARD ilvH ilvH IlvH ACT_AHAS protein|ACT domain containing protein, expressed",1.8741177,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0274800","Transcript","moderately similar to ( 224) AT1G69560 | Symbols: MYB105, AtMYB105 | MYB105 (myb domain protein 105); DNA binding / transcription factor | chr1:26157755-26158906 FORWARDweakly similar to ( 102) GAM1_ORYSA Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) REB1 protein|MYB family transcription factor, putative, expressed",-0.993018,null,31.1,"cell.organisation","Os03g0215700","Transcript","moderately similar to ( 274) AT2G01750 | Symbols: ATMAP70-3 | ATMAP70-3 (microtubule-associated proteins 70-3); microtubule binding | chr2:328351-331848 FORWARDMyosin_HC-like protein|ATMAP70 protein, putative, expressed",5.5818977,null,"20.2.1","stress.abiotic.heat","Os02g0656500","Transcript","moderately similar to ( 461) AT5G22060 | Symbols: ATJ2, J2 | ATJ2; protein binding | chr5:7303798-7305668 REVERSEmoderately similar to ( 476) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ_CXXCXGXG DnaJ protein|chaperone protein dnaJ, putative, expressed",-1.1058906,null,26.9,"misc.glutathione S transferases","Os07g0152700","Transcript","weakly similar to ( 168) AT1G78370 | Symbols: ATGSTU20 | ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20); glutathione transferase | chr1:29484428-29485204 REVERSEweakly similar to ( 174) GSTXA_TOBAC Probable glutathione S-transferase parA (EC 2.5.1.18) (Auxin-regulated protein parA) (STR246C protein) - Nicotiana tabacum (Common tobacco) GST_C_Tau GST_N_Tau protein|glutathione S-transferase, N-terminal domain containing protein, expressed",-1.935855,null,"1.2.4.4","PS.photorespiration.glycine cleavage.H protein","Os10g0516100","Transcript","moderately similar to ( 217) AT1G32470 | Symbols: | glycine cleavage system H protein, mitochondrial, putative | chr1:11739479-11740246 REVERSEmoderately similar to ( 302) GCSH_ORYSA Glycine cleavage system H protein, mitochondrial precursor - Oryza sativa (Rice) PRK01202 GCV_H GcvH protein|glycine cleavage system H protein, putative, expressed",4.7640057,null,"Os01g0926600","UDP glucosyl and glucoronyl transferases",0.9347682,1.0449662,1.4964318,1.978219,1.9188948,2.3698845]
[null,"13.1.4.1.4","amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase","Os03g0106400","Transcript","highly similar to ( 560) AT5G65780 | Symbols: ATBCAT-5 | ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic | chr5:26316418-26318585 FORWARD PRK06606 BCAT_beta_family Aminotran_4 PLPDE_IV IlvE D-AAT_like PRK08320 PRK07544 ADCL_like PRK07849 PRK06680 protein|aminotransferase domain containing protein, putative, expressed",2.145069,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0128000","Transcript","moderately similar to ( 238) AT1G68320 | Symbols: MYB62, AtMYB62, BW62B, BW62C | MYB62 (myb domain protein 62); DNA binding / transcription factor | chr1:25603842-25604884 FORWARDweakly similar to ( 155) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.60054,null,31.1,"cell.organisation","Os05g0382900","Transcript","moderately similar to ( 245) AT2G38760 | Symbols: ANNAT3 | ANNAT3 (ANNEXIN ARABIDOPSIS 3); calcium ion binding / calcium-dependent phospholipid binding | chr2:16201086-16202490 FORWARDmoderately similar to ( 229) ANX4_FRAAN Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) protein|annexin, putative, expressed",2.4894917,null,"20.2.1","stress.abiotic.heat","Os02g0782500","Transcript","very weakly similar to ( 100) AT1G54050 | Symbols: | 17.4 kDa class III heat shock protein (HSP17.4-CIII) | chr1:20179558-20180122 REVERSEvery weakly similar to (83.2) HSP21_IPONI 17.2 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) IbpA HSP20 alpha-crystallin-Hsps protein|hsp20/alpha crystallin family protein, putative, expressed",-2.0676515,null,26.9,"misc.glutathione S transferases","Os01g0371500","Transcript","moderately similar to ( 201) AT3G62760 | Symbols: ATGSTF13 | ATGSTF13; glutathione transferase | chr3:23217425-23218246 REVERSEmoderately similar to ( 272) GSTH1_ORYSA Probable glutathione S-transferase GSTF1 (EC 2.5.1.18) (GST-I) - Oryza sativa (Rice) GST_C_Phi GST_N_Phi Gst GST_N_GTT1_like protein|glutathione S-transferase, putative, expressed",1.7612106,{"$nulls":8},"Os10g0109300","Peroxidases",{"$nulls":3},1.9806662,3.9909286,4.1397552]
[null,"13.1.5.1.1","amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase","Os04g0650800","Transcript","highly similar to ( 748) AT4G34200 | Symbols: EDA9 | EDA9 (embryo sac development arrest 9); ATP binding | chr4:16374041-16376561 REVERSEvery weakly similar to (94.7) DHGY_CUCSA Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) 2-Hacid_dh SerA LdhA 2-Hacid_dh_C PRK11790 PRK06487 PRK06932 PRK08410 PRK07574 PRK00257 PRK08605 PRK06436 PRK12480 protein|D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed",-1.8694534,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0482400","Transcript","moderately similar to ( 483) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSEvery weakly similar to (98.6) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide repeat protein PPR986-12, putative, expressed",3.0890915,null,31.1,"cell.organisation","Os02g0708400","Transcript","highly similar to ( 698) AT3G27960 | Symbols: | kinesin light chain-related | chr3:10380513-10382593 REVERSE protein|tetratricopeptide repeat domain containing protein, expressed",0.9933732,null,"20.2.1","stress.abiotic.heat","Os03g0159900","Transcript","very weakly similar to (85.1) AT3G22530 | Symbols: | unknown protein | chr3:7977774-7978370 REVERSE protein|expressed protein",1.0589358,null,26.9,"misc.glutathione S transferases","Os07g0468100","Transcript","weakly similar to ( 172) AT1G17170 | Symbols: ATGSTU24, GST | ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24); glutathione binding / glutathione transferase | chr1:5869895-5870691 FORWARDmoderately similar to ( 217) GSTU1_ORYSA Probable glutathione S-transferase GSTU1 (EC 2.5.1.18) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",2.6875527,null,"1.2.5","PS.photorespiration.serine hydroxymethyltransferase","Os03g0738400","Transcript","highly similar to ( 863) AT4G37930 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | chr4:17831891-17834742 REVERSEhighly similar to ( 869) GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) SHMT GlyA glyA protein|serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed",2.250975,null,"Os11g0119700","cytochrome P450",1.972672,1.856874,1.4081569,1.9843307,2.1415029,3.078518]
[null,"13.1.5.1.2","amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine aminotransferase","Os03g0157900","Transcript","highly similar to ( 537) AT4G35630 | Symbols: PSAT | PSAT; O-phospho-L-serine:2-oxoglutarate aminotransferase | chr4:16904205-16905497 FORWARDhighly similar to ( 522) SERC_SPIOL Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) PRK05355 SerC PRK12462 Aminotran_5 protein|aminotransferase, putative, expressed",-1.5750166,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0532900","Transcript","moderately similar to ( 254) AT4G12350 | Symbols: MYB42, AtMYB42 | MYB42 (myb domain protein 42); transcription factor | chr4:7324912-7326636 FORWARDmoderately similar to ( 271) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) protein|MYB family transcription factor, putative, expressed",2.1058097,null,31.1,"cell.organisation","Os05g0585400","Transcript","moderately similar to ( 218) AT2G46225 | Symbols: ABIL1 | ABIL1 (Abi-1-like 1) | chr2:18982113-18984074 FORWARDhighly similar to ( 522) ABIL4_ORYSA Probable protein ABIL4 (Abl interactor-like protein 4) - Oryza sativa (Rice) protein|expressed protein",3.3436527,{"$nulls":22},"Os01g0687800","oxidases - copper, flavone etc.",{"$nulls":3},2.003201,0.9807272,1.7758708]
[null,"13.1.5.1.3","amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoserine phosphatase","Os11g0629500","Transcript","moderately similar to ( 350) AT1G18640 | Symbols: PSP | PSP (3-PHOSPHOSERINE PHOSPHATASE); phosphoserine phosphatase | chr1:6416524-6418245 REVERSE SerB protein|phosphoserine phosphatase, chloroplast precursor, putative, expressed",-1.4835685,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023,null,31.1,"cell.organisation","Os07g0532500","Transcript","weakly similar to ( 145) AT4G03500 | Symbols: | ankyrin repeat family protein | chr4:1553453-1556571 FORWARD ANK protein|ankyrin repeat family protein, putative, expressed",3.1190662,null,"20.2.2","stress.abiotic.cold","Os05g0566800","Transcript","weakly similar to ( 154) AT1G29395 | Symbols: COR414-TM1 | COR414-TM1 | chr1:10288345-10289539 REVERSEWCOR413 protein|cold acclimation protein WCOR413, putative, expressed",1.4706432,null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0513900","Transcript","highly similar to ( 557) AT4G21760 | Symbols: BGLU47 | BGLU47 (Beta-glucosidase 47); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:11561229-11563871 FORWARDmoderately similar to ( 367) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os4bglu18 - monolignol beta-glucoside homologue, expressed",3.3421793,{"$nulls":8},"Os11g0525600","Gluco-, Galacto- and mannosidases.alpha-mannosidase",1.320344,1.7040758,1.3257036,2.0137148,1.8860779,2.2107763]
[null,"13.1.5.3","amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine","Os09g0316000","Transcript","moderately similar to ( 253) AT3G58670 | Symbols: | unknown protein | chr3:21703693-21705314 REVERSE DUF1637 protein|2-aminoethanethiol dioxygenase, putative, expressed",2.0396268,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0474051","Transcript","moderately similar to ( 225) AT3G62890 | Symbols: | binding | chr3:23246168-23247973 FORWARD protein|pentatricopeptide, putative, expressed",1.4868604,null,31.1,"cell.organisation","Os05g0382600","Transcript","moderately similar to ( 236) AT2G38750 | Symbols: ANNAT4 | ANNAT4 (ANNEXIN ARABIDOPSIS 4); calcium ion binding / calcium-dependent phospholipid binding | chr2:16196582-16198431 REVERSEweakly similar to ( 125) ANX4_FRAAN Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) protein|annexin, putative, expressed",2.7545216,{"$nulls":8},26.3,"misc.gluco-, galacto- and mannosidases","Os08g0509400","Transcript","moderately similar to ( 457) AT2G44480 | Symbols: BGLU17 | BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr2:18360476-18363001 FORWARDmoderately similar to ( 364) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed",3.9423048,{"$nulls":8},"Os10g0378000","cytochrome P450",2.7770824,2.8870049,1.7770395,2.021163,1.8435879,1.7593536]
[null,"13.1.5.3.1","amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL","Os06g0564500","Transcript","moderately similar to ( 335) AT3G59760 | Symbols: OASC, ATCS-C | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | chr3:22072661-22075345 REVERSEmoderately similar to ( 341) CYSKP_SPIOL Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Spinacia oleracea (Spinach) CysK PRK10717 cysM PALP IlvA ThrC protein|cysteine synthase, putative, expressed",2.37991,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0508500","Transcript","moderately similar to ( 204) AT4G13480 | Symbols: AtMYB79 | AtMYB79 (myb domain protein 79); DNA binding / transcription factor | chr4:7836675-7837653 FORWARDweakly similar to ( 157) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.5152645,null,31.1,"cell.organisation","Os01g0625200","Transcript","highly similar to ( 679) AT3G16060 | Symbols: | kinesin motor family protein | chr3:5447503-5451196 FORWARDweakly similar to ( 157) K125_TOBAC 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) KISc_KIF2_like Kinesin KISc KISc KISc_KIP3_like KISc_CENP_E KISc_C_terminal KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_BimC_Eg5 KIP1 KISc_KID_like KISc_KIF23_like KISc_KIF9_like KISc_KLP2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",3.2697058,null,"20.2.3","stress.abiotic.drought/salt","Os05g0217800","Transcript","weakly similar to ( 156) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEweakly similar to ( 106) EA30_VICFA Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean)BURP protein|BURP domain containing protein, expressed",4.3420224,null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0511900","Transcript","moderately similar to ( 485) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 321) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu33 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed",3.6288593,{"$nulls":8},"Os12g0582700","cytochrome P450",{"$nulls":3},2.045436,1.3644962,2.0680017]
[null,"13.1.5.3.1","amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL","Os01g0978100","Transcript","moderately similar to ( 493) AT3G59760 | Symbols: OASC, ATCS-C | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | chr3:22072661-22075345 REVERSEhighly similar to ( 504) CYSKP_SOLTU Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) CysK PRK10717 cysM PALP IlvA protein|cysteine synthase, mitochondrial precursor, putative, expressed",1.7641544,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0193900","Transcript","moderately similar to ( 219) AT3G05380 | Symbols: ALY2, ATALY2 | DNA binding / nucleic acid binding / transcription factor | chr3:1540961-1546139 FORWARD DIRP protein|DIRP family protein, putative, expressed",-1.6069416,null,31.1,"cell.organisation","Os08g0531100","Transcript","moderately similar to ( 333) AT1G27920 | Symbols: MAP65-8 | MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8) | chr1:9726948-9729848 FORWARD MAP65_ASE1 protein|microtubule associated protein, putative, expressed",2.5747535,null,"20.2.3","stress.abiotic.drought/salt","Os01g0828300","Transcript","highly similar to ( 712) AT2G40280 | Symbols: | dehydration-responsive family protein | chr2:16825707-16828300 REVERSEDUF248 protein|methyltransferase, putative, expressed",-1.658373,null,26.3,"misc.gluco-, galacto- and mannosidases","Os01g0930800","Transcript","moderately similar to ( 464) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 286) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA arb PRK09852 protein|Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed",1.3126802,{"$nulls":8},"Os01g0805500","UDP glucosyl and glucoronyl transferases",{"$nulls":3},2.0558662,0.79358816,2.1197805]
[null,"13.1.6.1.5","amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase","Os01g0102600","Transcript","weakly similar to ( 155) AT3G26900 | Symbols: | shikimate kinase family protein | chr3:9912314-9914424 REVERSE protein|shikimate kinase, putative, expressed",2.0370784,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579,null,31.1,"cell.organisation","Os03g0780400","Transcript","moderately similar to ( 209) AT2G31200 | Symbols: ADF6, ATADF6 | ADF6 (ACTIN DEPOLYMERIZING FACTOR 6); actin binding | chr2:13294171-13294948 FORWARDweakly similar to ( 195) ADF_VITVI Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) ADF ADF Cofilin_ADF protein|actin-depolymerizing factor, putative, expressed",-1.0711025,null,"20.2.3","stress.abiotic.drought/salt","Os05g0215000","Transcript","weakly similar to ( 115) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",5.4819794,null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0511700","Transcript","moderately similar to ( 494) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 331) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed",-1.4125928,{"$nulls":8},"Os07g0539100","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",3.4355216,2.5490375,1.8625045,2.0562258,0.70964193,2.2283478]
[null,"13.1.6.1.5","amino acid metabolism.synthesis.aromatic aa.chorismate.shikimate kinase","Os04g0640600","Transcript","moderately similar to ( 271) AT2G21940 | Symbols: | shikimate kinase, putative | chr2:9351106-9352881 FORWARDaroK SK AroK SKI aroL aroK protein|shikimate kinase, putative, expressed",2.2150252,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0685400","Transcript","moderately similar to ( 224) AT4G37780 | Symbols: MYB87, ATMYB87 | MYB87 (MYB DOMAIN PROTEIN 87); DNA binding / transcription factor | chr4:17758404-17759526 REVERSEweakly similar to ( 164) MYB4_ORYSA Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.3034965,null,31.1,"cell.organisation","Os06g0474200","Transcript","moderately similar to ( 271) AT3G54170 | Symbols: ATFIP37, FIP37 | ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37); protein binding | chr3:20056848-20059396 FORWARD protein|FKBP12-interacting protein of 37 kDa, putative, expressed",-0.9868986,null,"20.2.3","stress.abiotic.drought/salt","Os03g0673800","Transcript","highly similar to ( 509) AT1G58520 | Symbols: RXW8 | hydrolase, acting on ester bonds / lipase | chr1:21729913-21731344 FORWARD DUF221 COG5594 protein|RXW8, putative, expressed",2.217145,null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0474800","Transcript","moderately similar to ( 460) AT5G44640 | Symbols: BGLU13 | BGLU13 (BETA GLUCOSIDASE 13); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:18011146-18012669 FORWARDmoderately similar to ( 377) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed",1.4347492,{"$nulls":8},"Os01g0941800","acid and other phosphatases",3.3545885,4.7734795,6.183366,2.1179733,2.5167646,3.1971588]
[null,"13.1.6.2","amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine","Os03g0195100","Transcript","highly similar to ( 503) AT4G33680 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2); L,L-diaminopimelate aminotransferase/ transaminase | chr4:16171847-16174630 REVERSE PRK07590 COG0436 PRK09276 PRK08068 PRK07682 Aminotran_1_2 PRK06108 PRK07681 PRK05764 PRK08361 PRK09148 PRK07212 PRK05942 ARO8 HisC PRK07366 PRK06220 PRK07683 PRK07337 PRK08175 PRK06290 PRK06375 PRK08636 PRK08362 PRK07550 PRK06056 PRK05794 PRK09147 PRK07309 PRK06836 PRK07865 MalY PRK07324 PRK08069 PRK06507 PRK07778 PRK07367 protein|aminotransferase, classes I and II, domain containing protein, expressed",-1.845352,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0634900","Transcript","moderately similar to ( 212) AT5G26660 | Symbols: ATMYB4, ATMYB86 | ATMYB86 (MYB DOMAIN PROTEIN 86); specific transcriptional repressor/ transcription repressor | chr5:9331775-9333044 REVERSEmoderately similar to ( 202) MYB3_HORVU Myb-related protein Hv33 - Hordeum vulgare (Barley) REB1 protein|myb-related protein Hv33, putative, expressed",3.0182467,null,31.1,"cell.organisation","Os09g0343200","Transcript","weakly similar to ( 160) AT4G03500 | Symbols: | ankyrin repeat family protein | chr4:1553453-1556571 FORWARD protein|expressed protein",-2.1994035,null,"20.2.3","stress.abiotic.drought/salt","Os03g0345300","Transcript","moderately similar to ( 305) AT3G62730 | Symbols: | unknown protein | chr3:23208003-23209436 REVERSE protein|desiccation-related protein PCC13-62 precursor, putative, expressed",1.5497125,null,26.3,"misc.gluco-, galacto- and mannosidases","Os06g0683300","Transcript","highly similar to ( 721) AT5G54570 | Symbols: BGLU41 | BGLU41 (BETA GLUCOSIDASE 41); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:22167636-22170235 REVERSEmoderately similar to ( 402) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed",1.6149316,{"$nulls":8},"Os11g0438000","nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases",{"$nulls":3},2.150013,1.8026872,3.5128083]
[null,"13.1.6.3.1","amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase","Os09g0565700","Transcript","moderately similar to ( 483) AT2G27820 | Symbols: PD1, ADT3 | PD1 (PREPHENATE DEHYDRATASE 1); arogenate dehydratase/ prephenate dehydratase | chr2:11856808-11858082 FORWARD PheA PRK11899 PRK11898 PDT pheA ACT_CM-PDT protein|prephenate dehydratase domain containing protein, expressed",-1.3244491,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0305900","Transcript","moderately similar to ( 212) AT2G47460 | Symbols: MYB12, ATMYB12, PFG1 | MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor | chr2:19476438-19479242 FORWARDmoderately similar to ( 212) MYBP_MAIZE Myb-related protein P - Zea mays (Maize) protein|MYB family transcription factor, putative, expressed",1.7271547,null,31.1,"cell.organisation","Os07g0588200","Transcript","moderately similar to ( 392) AT5G67470 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr5:26926835-26930212 FORWARD FH2 FH2 protein|formin, putative, expressed",-0.9774709,null,"20.2.3","stress.abiotic.drought/salt","Os01g0233000","Transcript","weakly similar to ( 139) SRS1_ORYSA Salt-stress root protein RS1 - Oryza sativa (Rice) protein|salt stress root protein RS1, putative, expressed",1.3461937,null,26.3,"misc.gluco-, galacto- and mannosidases","Os01g0773600","Transcript","highly similar to ( 803) AT5G43710 | Symbols: | glycoside hydrolase family 47 protein | chr5:17552252-17556523 REVERSE Glyco_hydro_47 protein|glycosyl hydrolase family 47 domain contain protein, expressed",-1.3841864,{"$nulls":8},"Os02g0532900","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",3.476625,5.2728834,5.0913906,2.1611876,0.93936205,3.0032268]
[null,"13.1.6.3.1","amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase","Os01g0528300","Transcript","weakly similar to ( 127) AT1G08250 | Symbols: ADT6 | ADT6 (arogenate dehydratase 6); arogenate dehydratase/ prephenate dehydratase | chr1:2588994-2590235 REVERSE protein|expressed protein",-1.4003545,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0470600","Transcript","moderately similar to ( 327) AT5G56110 | Symbols: ATMYB80, ATMYB103, MYB103, MS188 | ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103); DNA binding / transcription factor | chr5:22719191-22720664 FORWARDweakly similar to ( 193) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) REB1 protein|MYB family transcription factor, putative, expressed",1.0198911,null,31.1,"cell.organisation","Os11g0648100","Transcript","moderately similar to ( 211) AT5G27950 | Symbols: | kinesin motor protein-related | chr5:9984774-9987493 FORWARDweakly similar to ( 107) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_C_terminal Kinesin KISc KISc KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_KIP3_like KISc_KIF9_like KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_CENP_E Motor_domain KIP1 KISc_KIF2_like KISc_KIF23_like protein|kinesin motor domain containing protein, putative, expressed",3.4664917,null,"20.2.3","stress.abiotic.drought/salt","Os02g0675700","Transcript","highly similar to ( 773) AT4G00750 | Symbols: | dehydration-responsive family protein | chr4:314405-317507 FORWARDDUF248 protein|dehydration response related protein, putative, expressed",3.8019972,null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0474500","Transcript","moderately similar to ( 378) AT3G60130 | Symbols: BGLU16 | BGLU16 (BETA GLUCOSIDASE 16); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr3:22210440-22213650 FORWARDmoderately similar to ( 311) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB PRK09852 celA arb protein|Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed",3.0274389,{"$nulls":8},"Os01g0329900","GDSL-motif lipase",3.330062,4.793553,5.320168,2.1647944,3.902164,5.825979]
[null,"13.1.6.5.1","amino acid metabolism.synthesis.aromatic aa.tryptophan.anthranilate synthase","Os03g0826500","Transcript","highly similar to ( 798) AT5G05730 | Symbols: ASA1, TRP5, AMT1, WEI2 | ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1); anthranilate synthase | chr5:1719740-1722811 REVERSE TrpE Chorismate_bind PRK05940 PRK09070 PRK07508 PRK06404 PRK05877 MenF PRK07093 PRK07912 PRK07054 PRK06772 Anth_synt_I_N PRK06923 protein|anthranilate synthase component I-1, chloroplast precursor, putative, expressed",1.5269942,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292,null,31.1,"cell.organisation","Os03g0268100","Transcript","moderately similar to ( 229) AT5G59210 | Symbols: | myosin heavy chain-related | chr5:23890802-23893619 REVERSE protein|myosin heavy chain-related, putative, expressed",-0.960306,null,"20.2.3","stress.abiotic.drought/salt","Os06g0687450","Transcript","highly similar to ( 831) AT5G14430 | Symbols: | dehydration-responsive protein-related | chr5:4653092-4655741 FORWARDDUF248 protein|methyltransferase, putative, expressed",1.2349845,null,26.3,"misc.gluco-, galacto- and mannosidases","Os11g0683500","Transcript","highly similar to ( 768) AT3G06510 | Symbols: SFR2 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | chr3:2016450-2019533 FORWARDweakly similar to ( 114) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) BglB Glyco_hydro_1 PRK09852 celA protein|Os11bglu36 SFR2 homologue, expressed",3.5710804,{"$nulls":8},"Os07g0681200","acid and other phosphatases",5.462077,5.9865565,6.3220625,2.1744218,3.244842,4.0997777]
[null,"13.1.6.5.5","amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase","Os03g0797500","Transcript","moderately similar to ( 312) AT4G02610 | Symbols: | tryptophan synthase, alpha subunit, putative | chr4:1147662-1149217 FORWARDmoderately similar to ( 348) TRPA_MAIZE Indole-3-glycerol phosphate lyase, chloroplast precursor (EC 4.1.2.8) (Indole synthase) (Tryptophan synthase alpha chain) (EC 4.2.1.20) (Benzoxazineless 1) - Zea mays (Maize) Trp_syntA trp_synt_A Tryptophan_synthase_alpha TrpA protein|indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed",-2.0483215,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os10g0562100","Transcript","weakly similar to ( 108) AT2G38090 | Symbols: | myb family transcription factor | chr2:15945278-15946775 FORWARD protein|MYB family transcription factor, putative, expressed",-1.7148021,null,31.1,"cell.organisation","Os03g0718100","Transcript","highly similar to ( 762) AT3G12110 | Symbols: ACT11 | ACT11 (actin-11); structural constituent of cytoskeleton | chr3:3858116-3859609 FORWARDhighly similar to ( 775) ACT1_ORYSA Actin-1 - Oryza sativa (Rice) Actin ACTIN ACTIN COG5277 protein|actin, putative, expressed",-0.9754984,null,"20.2.3","stress.abiotic.drought/salt","Os05g0107900","Transcript","Di19 protein|drought induced 19 protein, putative, expressed",-1.3337746,null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0491100","Transcript","moderately similar to ( 418) AT2G44480 | Symbols: BGLU17 | BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr2:18360476-18363001 FORWARDmoderately similar to ( 332) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed",4.143511,{"$nulls":8},"Os11g0184300","Gluco-, Galacto- and mannosidases",{"$nulls":3},2.1794853,3.1947703,2.4563308]
[null,"13.1.7","amino acid metabolism.synthesis.histidine","Os01g0232700","Transcript","highly similar to ( 703) AT5G63890 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE); histidinol dehydrogenase | chr5:25565600-25568104 REVERSEhighly similar to ( 863) HISX_ORYSA Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) Histidinol_dh hisD HisD PRK12447 protein|histidinol dehydrogenase, chloroplast precursor, putative, expressed",1.0168957,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os05g0589400","Transcript","weakly similar to ( 124) AT5G47390 | Symbols: | myb family transcription factor | chr5:19227001-19228546 FORWARD protein|Myb transcription factor, putative, expressed",5.3580303,null,31.1,"cell.organisation","Os12g0169100","Transcript","weakly similar to ( 152) AT3G05270 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink). | chr3:1500803-1502926 REVERSE DUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",1.8719492,null,"20.2.3","stress.abiotic.drought/salt","Os06g0240050","Transcript","weakly similar to ( 120) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",1.3349804,null,26.3,"misc.gluco-, galacto- and mannosidases","Os11g0184300","Transcript","weakly similar to ( 181) AT5G24550 | Symbols: BGLU32 | BGLU32 (BETA GLUCOSIDASE 32); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:8392059-8395302 REVERSEweakly similar to ( 146) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os11bglu37 - GH1 pseudogene, expressed",2.6101954,{"$nulls":8},"Os04g0474500","Gluco-, Galacto- and mannosidases",3.5325074,4.4530997,3.1016655,2.208395,2.956152,3.9177694]
[null,"13.2.2.3","amino acid metabolism.degradation.glutamate family.arginine","Os03g0643300","Transcript","highly similar to ( 673) AT5G46180 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid transaminase | chr5:18718766-18721271 REVERSEweakly similar to ( 121) GSA_HORVU Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Hordeum vulgare (Barley) rocD ArgD rocD Aminotran_3 GabT PRK03711 PRK02627 BioA argD argD argD PRK07323 PRK05769 PRK08117 argD PRK11522 PRK08555 argD PRK12381 PRK08593 PRK07495 PRK06918 argD PRK04260 argD PRK06062 PRK09264 HemL PRK09221 PRK06917 PRK07481 PRK06938 PRK06058 PRK07483 PRK08360 PRK05639 PRK07678 PRK08088 PRK06541 PRK06931 PRK06916 PRK06777 PRK09792 PRK06105 PRK09044 PRK07480 PRK06148 PRK06082 PRK08466 PRK00062 PRK07986 PRK05964 PRK08297 PRK07482 PRK06173 PRK07036 PRK07030 PRK05965 PRK12403 PRK00615 PRK12389 PRK07894 PRK06943 PRK08742 PRK06149 PRK06942 PRK05630 PRK06209 PRK07046 protein|aminotransferase, putative, expressed",-1.3771795,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0603300","Transcript","weakly similar to ( 145) AT5G56840 | Symbols: | DNA-binding family protein | chr5:22980789-22982152 FORWARD protein|Myb transcription factor, putative, expressed",1.9925747,null,31.1,"cell.organisation","Os04g0422000","Transcript","moderately similar to ( 248) AT5G09820 | Symbols: | plastid-lipid associated protein PAP / fibrillin family protein | chr5:3056090-3057380 REVERSEPAP_fibrillin protein|PAP fibrillin family domain containing protein, expressed",4.3709965,{"$nulls":8},26.3,"misc.gluco-, galacto- and mannosidases","Os04g0477500","Transcript","highly similar to ( 553) AT3G27540 | Symbols: | glycosyl transferase family 17 protein | chr3:10205489-10206888 FORWARDGlyco_transf_17 protein|glycosyl transferase family 17 protein, putative, expressed",1.3472666,{"$nulls":8},"Os03g0421800","beta 1,3 glucan hydrolases",2.1406908,5.114003,5.890252,2.2116785,1.9844098,2.8433723]
[null,"13.2.4.3","amino acid metabolism.degradation.branched-chain group.valine","Os06g0677400","Transcript","moderately similar to ( 420) AT4G20930 | Symbols: | 3-hydroxyisobutyrate dehydrogenase, putative | chr4:11198627-11201036 REVERSE MmsB garR NAD_binding_2 protein|dehydrogenase, putative, expressed",1.8178015,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0524500","Transcript","weakly similar to ( 144) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.2737515,null,31.1,"cell.organisation","Os04g0375900","Transcript","weakly similar to ( 137) AT5G23910 | Symbols: | ATP binding / microtubule motor | chr5:8068452-8072723 FORWARD KISc_KID_like KISc Kinesin KISc KISc_C_terminal KISc_KIP3_like KISc_KIF2_like KISc_CENP_E KIP1 KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 protein|kinesin motor domain containing protein, putative, expressed",2.9517965,null,"20.2.4","stress.abiotic.touch/wounding","Os03g0299600","Transcript","very weakly similar to (83.6) AT3G10985 | Symbols: SAG20, WI12, ATWI-12 | SAG20 (SENESCENCE ASSOCIATED GENE 20) | chr3:3442776-3443108 FORWARDvery weakly similar to (85.1) WUN1_SOLTU Wound-induced protein 1 - Solanum tuberosum (Potato)WI12 protein|wound-induced protein WI12, putative, expressed",1.8004555,null,"26.3.1","misc.gluco-, galacto- and mannosidases.alpha-galactosidase","Os01g0130400","Transcript","nearly identical (1269) AT1G68560 | Symbols: ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase | chr1:25734435-25737897 REVERSEhighly similar to ( 802) AGLU_SPIOL Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) Glyco_hydro_31 COG1501 PRK10658 PRK10426 protein|glycosyl hydrolase, family 31, putative, expressed",1.744208,{"$nulls":8},"Os02g0817900","cytochrome P450",0.84720945,1.0962195,1.4860439,2.2318044,2.364201,2.9535365]
[null,"13.2.4.4","amino acid metabolism.degradation.branched-chain group.leucine","Os08g0424200","Transcript","highly similar to ( 810) AT4G34030 | Symbols: MCCB | MCCB (3-METHYLCROTONYL-COA CARBOXYLASE); biotin carboxylase/ methylcrotonoyl-CoA carboxylase | chr4:16301298-16303949 FORWARD COG4799 Carboxyl_trans protein|methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed",1.2270833,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os04g0341900","Transcript","weakly similar to ( 118) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.324516,null,31.1,"cell.organisation","Os02g0775400","Transcript","highly similar to ( 919) AT5G06670 | Symbols: | ATP binding / microtubule motor | chr5:2048243-2055019 REVERSEmoderately similar to ( 228) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KHC_KIF5 KISc_KIF3 KISc_KIF4 KISc_KIP3_like KISc_BimC_Eg5 KISc_KIF1A_KIF1B KISc_C_terminal KISc_KLP2_like KISc_KIF2_like KISc_KIF23_like KIP1 KISc_KID_like KISc_KIF9_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",1.99219,{"$nulls":8},"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os06g0573600","Transcript","highly similar to ( 949) AT3G13750 | Symbols: BGAL1 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding | chr3:4511192-4515756 FORWARDnearly identical (1036) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 LacA protein|beta-galactosidase precursor, putative, expressed",3.277757,{"$nulls":8},"Os04g0630100","alcohol dehydrogenases",{"$nulls":3},2.2604332,4.768241,3.8480916]
[null,"13.2.4.4","amino acid metabolism.degradation.branched-chain group.leucine","Os12g0605800","Transcript","highly similar to ( 892) AT1G03090 | Symbols: MCCA | MCCA; methylcrotonoyl-CoA carboxylase | chr1:739715-743819 FORWARDnearly identical (1280) MCCA_ORYSA Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) COG4770 PRK08591 PRK08654 PRK06111 AccC PRK12999 PRK05586 PycA PRK08462 PRK12833 PRK07178 PRK08463 CPSase_L_D2 Biotin_carb_C CPSase_L_chain CarB PRK09282 protein|methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed",1.2200819,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os03g0859900","Transcript","moderately similar to ( 250) AT5G60720 | Symbols: | unknown protein | chr5:24418436-24422177 REVERSEDUF547 protein|expressed protein",3.5007906,null,31.1,"cell.organisation","Os03g0836000","Transcript","highly similar to ( 763) AT5G09810 | Symbols: ACT2, ACT7 | ACT7 (ACTIN 7); structural constituent of cytoskeleton | chr5:3052809-3054220 FORWARDhighly similar to ( 781) ACT3_ORYSA Actin-3 - Oryza sativa (Rice) Actin ACTIN ACTIN COG5277 protein|actin, putative, expressed",-1.1792774,null,"20.2.99","stress.abiotic.unspecified","Os08g0460000","Transcript","moderately similar to ( 217) AT5G20630 | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase | chr5:6975315-6975950 REVERSEmoderately similar to ( 228) ABP20_PRUPE Auxin-binding protein ABP20 precursor - Prunus persica (Peach)Cupin_1 protein|Cupin domain containing protein, expressed",7.935741,null,"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os09g0539200","Transcript","highly similar to ( 835) AT2G16730 | Symbols: BGAL13 | BGAL13; beta-galactosidase | chr2:7261986-7266105 REVERSEhighly similar to ( 634) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 Gal_Lectin LacA protein|beta-galactosidase precursor, putative, expressed",-1.1824306,{"$nulls":8},"Os03g0736300","Gluco-, Galacto- and mannosidases.endoGlucanase",2.6344376,4.421479,4.6319304,2.292163,2.0789738,3.4154387]
[null,"13.2.5.2","amino acid metabolism.degradation.serine-glycine-cysteine group.glycine","Os04g0623800","Transcript","highly similar to ( 637) AT1G11860 | Symbols: | aminomethyltransferase, putative | chr1:4001801-4003245 FORWARDhighly similar to ( 657) GCST_SOLTU Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) gcvT GcvT GCV_T dmdA GCV_T_C protein|aminomethyltransferase, putative, expressed",2.8655863,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os06g0704100","Transcript","highly similar to ( 547) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",1.9001607,null,31.1,"cell.organisation","Os03g0587200","Transcript","highly similar to ( 528) AT3G20150 | Symbols: | kinesin motor family protein | chr3:7031412-7036499 FORWARDweakly similar to ( 150) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii Kinesin-related KISc_KLP2_like Kinesin KISc KISc KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_CENP_E KISc_BimC_Eg5 KISc_C_terminal KISc_KIF9_like KISc_KIF4 KISc_KIF3 KISc_KIP3_like KIP1 KISc_KID_like KISc_KIF2_like KISc_KIF23_like protein|Kinesin motor domain domain containing protein, expressed",2.806609,null,"20.2.99","stress.abiotic.unspecified","Os01g0249200","Transcript","moderately similar to ( 248) AT3G62020 | Symbols: GLP10 | GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | chr3:22971443-22972192 REVERSEmoderately similar to ( 255) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.9880025,null,"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os01g0875500","Transcript","highly similar to ( 946) AT5G63810 | Symbols: BGAL10 | BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding | chr5:25537242-25541315 FORWARDhighly similar to ( 833) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 Gal_Lectin LacA protein|beta-galactosidase precursor, putative, expressed",3.2286427,{"$nulls":8},"Os05g0419800","GDSL-motif lipase",{"$nulls":3},2.3083482,3.2780666,2.910159]
[null,"13.2.6.2","amino acid metabolism.degradation.aromatic aa.tyrosine","Os03g0421700","Transcript","weakly similar to ( 143) AT4G15940 | Symbols: | fumarylacetoacetate hydrolase family protein | chr4:9038361-9040163 FORWARD MhpD FAA_hydrolase protein|fumarylacetoacetate hydrolase family protein, expressed",-0.9626622,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os02g0153000","Transcript","moderately similar to ( 395) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",2.51517,null,31.1,"cell.organisation","Os08g0117000","Transcript","moderately similar to ( 468) AT3G63480 | Symbols: | kinesin heavy chain, putative | chr3:23441065-23443809 REVERSEmoderately similar to ( 217) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_KHC_KIF5 Kinesin KISc KISc KISc_C_terminal KISc_KIF4 KISc_KIF3 KISc_BimC_Eg5 KISc_CENP_E KISc_KLP2_like KISc_KIF1A_KIF1B KISc_KIP3_like KISc_KIF9_like KIP1 KISc_KID_like KISc_KIF23_like KISc_KIF2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",4.2982936,null,"20.2.99","stress.abiotic.unspecified","Os01g0875300","Transcript","moderately similar to ( 203) AT1G44760 | Symbols: | universal stress protein (USP) family protein | chr1:16896894-16898427 REVERSE protein|universal stress protein domain containing protein, putative, expressed",3.2292225,null,"26.3.3","misc.gluco-, galacto- and mannosidases.alpha-mannosidase","Os11g0525600","Transcript","nearly identical (1367) AT5G13980 | Symbols: | glycosyl hydrolase family 38 protein | chr5:4508626-4513928 FORWARD Glyco_hydro_38 Glyco_hydro_38C Alpha-mann_mid protein|lysosomal alpha-mannosidase precursor, putative, expressed",2.0368564,{"$nulls":8},"Os01g0368000","oxidases - copper, flavone etc.",{"$nulls":3},2.338848,2.5949163,3.1473079]
[null,"13.2.6.2","amino acid metabolism.degradation.aromatic aa.tyrosine","Os03g0829000","Transcript","weakly similar to ( 200) AT4G15940 | Symbols: | fumarylacetoacetate hydrolase family protein | chr4:9038361-9040163 FORWARD MhpD FAA_hydrolase PRK10691 protein|fumarylacetoacetase, putative, expressed",-0.9626622,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854,null,31.1,"cell.organisation","Os03g0364500","Transcript","moderately similar to ( 489) AT2G26770 | Symbols: | plectin-related | chr2:11404257-11407743 REVERSE protein|proline-rich family protein, putative, expressed",1.6804456,null,"20.2.99","stress.abiotic.unspecified","Os09g0568700","Transcript","weakly similar to ( 111) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEweakly similar to ( 115) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",-1.3166856,null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os02g0733300","Transcript","highly similar to ( 702) AT1G70710 | Symbols: ATGH9B1, CEL1 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:26659356-26662962 REVERSEhighly similar to ( 925) GUN6_ORYSA Endoglucanase 6 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",1.841709,{"$nulls":8},"Os06g0187500","UDP glucosyl and glucoronyl transferases",-1.3155017,-2.0532951,-1.5675001,2.3565116,3.8379016,3.4131088]
[null,"13.2.6.3","amino acid metabolism.degradation.aromatic aa.tryptophan","Os02g0654000","Transcript","moderately similar to ( 271) AT4G16800 | Symbols: | enoyl-CoA hydratase, putative | chr4:9454931-9456309 REVERSEvery weakly similar to (89.0) MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( PRK07657 PRK05809 PRK06688 CaiD PRK08138 PRK07658 PRK09076 PRK06494 PRK05979 PRK09674 ECH PRK03580 PRK09245 PRK05862 PRK08252 PRK05980 PRK08150 fadJ PRK07628 PRK07799 PRK07509 PRK06495 PRK08259 fadB PRK07510 PRK06127 PRK06144 PRK08140 PRK06190 PRK06142 PRK08139 PRK06563 PRK08260 PRK05995 PRK07659 PRK07511 PRK06210 MenB PRK07396 PRK05864 PRK07854 PRK06143 PRK08258 PRK08290 PRK11423 PRK06951 PRK07830 PRK07938 PRK07629 PRK05981 PRK08321 PRK09120 PRK07110 PRK05869 PRK05870 PRK08272 PRK07817 PRK07468 PRK06072 PRK07327 PRK07260 PRK08788 PRK05674 PRK05617 PRK06023 protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed",1.0588921,null,"27.3.29","RNA.regulation of transcription.TCP transcription factor family","Os02g0747400","Transcript","weakly similar to ( 143) AT1G69690 | Symbols: | TCP family transcription factor, putative | chr1:26216449-26217426 FORWARDTCP protein|TCP-domain protein, putative, expressed",3.0791883,null,31.1,"cell.organisation","Os03g0237600","Transcript","highly similar to ( 535) AT1G14690 | Symbols: MAP65-7 | MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7) | chr1:5052090-5054936 REVERSE MAP65_ASE1 protein|microtubule associated protein, putative, expressed",1.5514545,null,"20.2.99","stress.abiotic.unspecified","Os01g0284500","Transcript","moderately similar to ( 241) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEmoderately similar to ( 240) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.4000788,null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os05g0129200","Transcript","moderately similar to ( 451) AT2G44540 | Symbols: AtGH9B9 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr2:18386341-18388110 REVERSEhighly similar to ( 936) GUN14_ORYSA Endoglucanase 14 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 14) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.024666,{"$nulls":8},"Os03g0784000","oxidases - copper, flavone etc.",{"$nulls":3},2.4045658,0.9576416,2.3577795]
[null,"13.2.6.3","amino acid metabolism.degradation.aromatic aa.tryptophan","Os06g0594100","Transcript","moderately similar to ( 491) AT4G13360 | Symbols: | catalytic | chr4:7775133-7777701 FORWARD PRK06028 PRK06952 PRK07759 PRK07828 PRK06493 PRK05617 CaiD PRK06072 PRK07657 ECH PRK05980 protein|enoyl-CoA hydratase/isomerase family protein, putative, expressed",1.1202508,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0602300","Transcript","very weakly similar to (94.4) AT2G38250 | Symbols: | DNA-binding protein-related | chr2:16018384-16019500 FORWARD protein|transcription factor TF2, putative, expressed",-1.2535847,null,31.1,"cell.organisation","Os12g0547500","Transcript","highly similar to ( 787) AT2G47500 | Symbols: | ATP binding / microtubule motor | chr2:19493247-19497882 FORWARDweakly similar to ( 197) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_C_terminal KISc Kinesin KISc KISc_KHC_KIF5 KISc_KIF4 KISc_KIF3 KISc_KIP3_like KISc_KIF1A_KIF1B KISc_CENP_E KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_KIF2_like KISc_KIF9_like KIP1 KISc_KIF23_like Motor_domain protein|kinesin-4, putative, expressed",1.9185442,null,"20.2.99","stress.abiotic.unspecified","Os02g0705400","Transcript","weakly similar to ( 162) AT2G21620 | Symbols: RD2 | RD2 | chr2:9248749-9249986 FORWARD protein|universal stress protein domain containing protein, putative, expressed",-1.4217519,null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os03g0329500","Transcript","highly similar to ( 775) AT5G49720 | Symbols: ATGH9A1, DEC, KOR, RSW2, IRX2, KOR1 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:20197765-20200168 REVERSEnearly identical (1057) GUN9_ORYSA Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.7066774,{"$nulls":8},"Os02g0243300","UDP glucosyl and glucoronyl transferases",{"$nulls":3},2.433145,4.2876725,4.906921]
[null,13.99,"amino acid metabolism.misc","Os02g0729500","Transcript","very weakly similar to (96.3) AT4G22780 | Symbols: ACR7 | ACR7; amino acid binding | chr4:11968696-11970956 REVERSEACT_ACR_2 protein|ACT domain-containing protein, putative, expressed",1.2128259,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0445600","Transcript","weakly similar to ( 130) AT3G58630 | Symbols: | transcription factor | chr3:21683928-21685771 REVERSE protein|transcription factor like protein, putative, expressed",-1.0994588,null,31.1,"cell.organisation","Os09g0450300","Transcript","highly similar to ( 561) AT2G01910 | Symbols: ATMAP65-6, MAP65-6 | ATMAP65-6; microtubule binding | chr2:417698-420182 FORWARD MAP65_ASE1 protein|microtubule associated protein, putative, expressed",3.8937235,null,"20.2.99","stress.abiotic.unspecified","Os08g0189200","Transcript","moderately similar to ( 230) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",5.8566914,null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os03g0736300","Transcript","highly similar to ( 689) AT5G49720 | Symbols: ATGH9A1, DEC, KOR, RSW2, IRX2, KOR1 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:20197765-20200168 REVERSEhighly similar to ( 943) GUN10_ORYSA Endoglucanase 10 (EC 3.2.1.4) (Endo-1,4-beta glucanase 10) (OsGLU2) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.595525,{"$nulls":8},"Os12g0119000","cytochrome P450",2.140339,2.0258737,1.0853219,2.5055532,1.9560108,3.0089002]
[null,13.99,"amino acid metabolism.misc","Os08g0533600","Transcript","moderately similar to ( 426) AT1G69040 | Symbols: ACR4 | ACR4 (ACT REPEAT 4); amino acid binding | chr1:25957843-25960079 FORWARDACT_ACR_3 ACT_ACR_1 ACT_ACR_2 ACT_ACR_4 protein|ACT domain containing protein, expressed",1.1887459,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os01g0318400","Transcript","weakly similar to ( 150) AT3G10040 | Symbols: | transcription factor | chr3:3096580-3097875 REVERSE protein|homeodomain, putative, expressed",-1.3575705,null,31.1,"cell.organisation","Os08g0547500","Transcript","highly similar to ( 513) AT5G66310 | Symbols: | kinesin motor family protein | chr5:26485786-26490304 REVERSEweakly similar to ( 165) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KIP3_like KISc_KIF4 KISc_KIF1A_KIF1B KISc_KIF3 KISc_C_terminal KISc_KHC_KIF5 KISc_BimC_Eg5 KIP1 KISc_KLP2_like KISc_KIF9_like KISc_KIF2_like KISc_KID_like KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, expressed",4.565473,null,"20.2.99","stress.abiotic.unspecified","Os06g0114500","Transcript","weakly similar to ( 116) AT1G01170 | Symbols: | ozone-responsive stress-related protein, putative | chr1:74105-74443 REVERSEDUF1138 protein|ATOZI1, putative, expressed",1.5791136,null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os09g0533900","Transcript","highly similar to ( 604) AT1G75680 | Symbols: AtGH9B7 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:28417215-28419231 REVERSEhighly similar to ( 929) GUN24_ORYSA Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",1.8041593,{"$nulls":8},"Os01g0293900","Peroxidases",3.6051202,3.624507,2.5763922,2.5534673,5.2700953,4.637275]
[{"$nulls":8},"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os02g0648300","Transcript","weakly similar to ( 157) AT1G76890 | Symbols: GT2, AT-GT2 | GT2; transcription factor | chr1:28873211-28875203 REVERSE protein|expressed protein",3.4605591,null,31.1,"cell.organisation","Os08g0280200","Transcript","highly similar to ( 503) AT2G25050 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr2:10654108-10659383 REVERSE FH2 FH2 protein|retrotransposon protein, putative, unclassified, expressed",-1.12704,null,"20.2.99","stress.abiotic.unspecified","Os08g0189300","Transcript","moderately similar to ( 226) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|cupin domain containing protein, expressed",4.864809,{"$nulls":15},"Os07g0156200","Peroxidases",3.6051202,3.624507,2.5763922,2.5534673,5.2700953,4.637275]
[null,"2.1.1.2","major CHO metabolism.synthesis.sucrose.SPP","Os02g0143100","Transcript","highly similar to ( 561) AT2G35840 | Symbols: | sucrose-phosphatase 1 (SPP1) | chr2:15053952-15055776 FORWARDS6PP S6PP_C Hydrolase_3 Cof protein|sucrose-phosphatase, putative, expressed",1.0617962,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os10g0516500","Transcript","weakly similar to ( 167) AT1G76880 | Symbols: | trihelix DNA-binding protein, putative | chr1:28865594-28867931 FORWARD protein|expressed protein",-1.1469765,null,31.1,"cell.organisation","Os02g0817200","Transcript","highly similar to ( 543) AT2G31300 | Symbols: ARPC1B, ARPC1 | ARPC1B (ACTIN-RELATED PROTEIN C1B); actin binding / nucleotide binding | chr2:13346313-13349787 REVERSE protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2237717,null,"20.2.99","stress.abiotic.unspecified","Os04g0465600","Transcript","weakly similar to ( 125) AT1G24020 | Symbols: MLP423 | MLP423 (MLP-LIKE PROTEIN 423) | chr1:8500653-8501458 REVERSEBet_v_I protein|pathogenesis-related Bet v I family protein, putative, expressed",4.388162,null,"26.11.1","misc.alcohol dehydrogenases","Os11g0210500","Transcript","highly similar to ( 622) AT1G77120 | Symbols: ADH1, ADH, ATADH, ATADH1 | ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | chr1:28975509-28977216 FORWARDhighly similar to ( 753) ADH2_ORYSA Alcohol dehydrogenase 2 (EC 1.1.1.1) - Oryza sativa (Rice) AdhC Tdh AdhP tdh PRK09422 ADH_zinc_N Qor PRK10083 ADH_N PRK10309 protein|dehydrogenase, putative, expressed",-2.2529678,{"$nulls":8},"Os09g0503100","oxidases - copper, flavone etc.",{"$nulls":3},2.60463,1.9195642,3.3446379]
[null,"2.1.2.1","major CHO metabolism.synthesis.starch.AGPase","Os01g0633100","Transcript","highly similar to ( 597) AT1G27680 | Symbols: APL2 | APL2 (ADPGLC-PPASE LARGE SUBUNIT); glucose-1-phosphate adenylyltransferase | chr1:9631630-9634450 FORWARDhighly similar to ( 805) GLGL1_MAIZE Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Shrunken-2) - Zea mays (Ma glgC GlgC NTP_transferase glgC glgC glgC glgC glgC glgC glgC GCD1 protein|glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed",1.1146822,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os11g0490900","Transcript","weakly similar to ( 159) AT5G13080 | Symbols: WRKY75, ATWRKY75 | WRKY75; transcription factor | chr5:4149928-4151019 REVERSEWRKY protein|WRKY72, expressed",-2.0225337,null,31.1,"cell.organisation","Os02g0810200","Transcript","highly similar to ( 503) AT4G14330 | Symbols: | phragmoplast-associated kinesin-related protein 2 (PAKRP2) | chr4:8244228-8247286 FORWARDweakly similar to ( 101) K125_TOBAC 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) KISc KISc Kinesin KISc_C_terminal KISc_BimC_Eg5 KISc_KHC_KIF5 KISc_KIF2_like KIP1 KISc_KID_like KISc_KIF3 KISc_KIP3_like KISc_CENP_E KISc_KIF4 KISc_KIF1A_KIF1B KISc_KIF9_like KISc_KIF23_like KISc_KLP2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",3.3432457,null,"20.2.99","stress.abiotic.unspecified","Os08g0189900","Transcript","moderately similar to ( 239) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.2424258,null,"26.11.1","misc.alcohol dehydrogenases","Os03g0189400","Transcript","moderately similar to ( 318) AT1G22430 | Symbols: | alcohol dehydrogenase, putative | chr1:7919235-7921594 FORWARDmoderately similar to ( 262) ADH1_PETHY Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) AdhC AdhP Tdh protein|dehydrogenase, putative, expressed",-1.8898478,{"$nulls":8},"Os01g0649900","GDSL-motif lipase",4.3161435,6.6625056,5.720239,2.6122952,4.415506,4.5333405]
[null,"2.1.2.1","major CHO metabolism.synthesis.starch.AGPase","Os08g0345800","Transcript","highly similar to ( 780) AT5G48300 | Symbols: ADG1, APS1 | ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase | chr5:19570326-19572557 FORWARDhighly similar to ( 904) GLGS_ORYSA Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) - Oryza sativa (Rice) glgC GlgC glgC glgC glgC glgC glgC glgC glgC NTP_transferase GCD1 RfbA protein|glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed",2.5752084,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0734000","Transcript","weakly similar to ( 170) AT5G41570 | Symbols: WRKY24, ATWRKY24 | WRKY24; transcription factor | chr5:16624220-16625689 FORWARDWRKY protein|WRKY23, expressed",-1.2598414,null,31.1,"cell.organisation","Os02g0588300","Transcript","highly similar to ( 842) AT5G35700 | Symbols: FIM2 | FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding | chr5:13872833-13876432 REVERSE SAC6 protein|fimbrin-like protein 2, putative, expressed",2.2123897,null,"20.2.99","stress.abiotic.unspecified","Os10g0371000","Transcript","weakly similar to ( 153) AT4G08685 | Symbols: SAH7 | SAH7 | chr4:5550563-5551259 FORWARDweakly similar to ( 130) PSC13_MAIZE Pollen-specific protein C13 precursor - Zea mays (Maize)Pollen_Ole_e_I protein|POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed",3.015258,null,"26.11.1","misc.alcohol dehydrogenases","Os04g0630100","Transcript","weakly similar to ( 197) AT1G61720 | Symbols: BAN | BAN (BANYULS); oxidoreductase | chr1:22791326-22792757 REVERSEweakly similar to ( 156) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG protein|leucoanthocyanidin reductase, putative, expressed",3.6255887,{"$nulls":8},"Os04g0469800","cytochrome P450",{"$nulls":3},2.6226416,1.4318285,2.1509876]
[null,"2.1.2.1","major CHO metabolism.synthesis.starch.AGPase","Os03g0735000","Transcript","highly similar to ( 770) AT5G19220 | Symbols: ADG2, APL1 | APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1); glucose-1-phosphate adenylyltransferase | chr5:6463931-6466775 REVERSEhighly similar to ( 764) GLGL3_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Solanum tuberosum (Potato glgC GlgC glgC glgC glgC glgC NTP_transferase glgC glgC glgC GCD1 RfbA protein|glucose-1-phosphate adenylyltransferase large subunit, putative, expressed",2.2307365,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0246700","Transcript","moderately similar to ( 280) AT1G62300 | Symbols: WRKY6, ATWRKY6 | WRKY6; transcription factor | chr1:23016887-23019155 REVERSEWRKY protein|WRKY1, expressed",-1.8576914,null,31.1,"cell.organisation","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655,null,"20.2.99","stress.abiotic.unspecified","Os02g0532500","Transcript","moderately similar to ( 222) AT3G10080 | Symbols: | germin-like protein, putative | chr3:3107476-3108159 REVERSEweakly similar to ( 147) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.1768322,null,"26.11.1","misc.alcohol dehydrogenases","Os06g0623300","Transcript","moderately similar to ( 319) AT2G33590 | Symbols: | cinnamoyl-CoA reductase family | chr2:14224622-14226365 FORWARDweakly similar to ( 189) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG Epimerase 3Beta_HSD protein|reductase, putative, expressed",1.040073,{"$nulls":8},"Os04g0507700","GDSL-motif lipase",{"$nulls":3},2.6363063,1.6300526,1.6644754]
[null,"2.1.2.2","major CHO metabolism.synthesis.starch.starch synthase","Os06g0133000","Transcript","highly similar to ( 768) AT1G32900 | Symbols: | starch synthase, putative | chr1:11920582-11923506 REVERSEnearly identical (1214) SSG1_ORYSA Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Oryza sativa (Rice)glgA GlgA Glyco_transf_5 RfaG Glycos_transf_1 protein|starch synthase, putative, expressed",-2.2645013,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os08g0499300","Transcript","moderately similar to ( 327) AT5G56270 | Symbols: WRKY2, ATWRKY2 | WRKY2; transcription factor | chr5:22780816-22783137 FORWARDWRKY protein|WRKY30, expressed",-1.3271414,null,31.1,"cell.organisation","Os04g0649200","Transcript","moderately similar to ( 205) AT1G19835 | Symbols: | unknown protein | chr1:6856212-6859513 REVERSEDUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",3.0476112,null,"20.2.99","stress.abiotic.unspecified","Os03g0161600","Transcript","very weakly similar to (95.9) AT4G14723 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 130 Blast hits to 130 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:8440167-8440693 FORWARD protein|expressed protein",2.6363022,null,"26.11.1","misc.alcohol dehydrogenases","Os11g0210300","Transcript","highly similar to ( 551) AT1G77120 | Symbols: ADH1, ADH, ATADH, ATADH1 | ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | chr1:28975509-28977216 FORWARDhighly similar to ( 657) ADH1_ORYSA Alcohol dehydrogenase 1 (EC 1.1.1.1) - Oryza sativa (Rice) AdhC Tdh AdhP tdh ADH_zinc_N PRK09422 ADH_N PRK10309 Qor protein|dehydrogenase, putative, expressed",-1.0419011,{"$nulls":8},"Os02g0236800","Peroxidases",3.3894815,5.52762,6.1501923,2.6530647,3.3109891,5.737488]
[null,"2.1.2.2","major CHO metabolism.synthesis.starch.starch synthase","Os10g0437600","Transcript","highly similar to ( 858) AT3G01180 | Symbols: AtSS2 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups | chr3:62456-65678 REVERSEnearly identical (1497) SSY21_ORYSA Soluble starch synthase 2-1, chloroplast precursor (EC 2.4.1.21) (Soluble starch synthase II-1) - Oryza sativa (Rice)glgA GlgA Glyco_transf_5 protein|starch synthase, putative, expressed",2.085221,null,"27.3.34","RNA.regulation of transcription.Orphan family","Os01g0180300","Transcript","moderately similar to ( 228) AT3G16000 | Symbols: MFP1 | MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1); DNA binding | chr3:5431041-5433613 REVERSEmoderately similar to ( 221) MFP1_TOBAC MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) protein|MAR-binding filament-like protein 1, putative, expressed",3.2926652,null,31.1,"cell.organisation","Os03g0761200","Transcript","moderately similar to ( 476) AT5G65860 | Symbols: | ankyrin repeat family protein | chr5:26347706-26348686 REVERSE protein|ankyrin repeat domain containing protein, putative, expressed",-1.309445,null,"20.2.99","stress.abiotic.unspecified","Os08g0190100","Transcript","moderately similar to ( 235) AT5G39110 | Symbols: | germin-like protein, putative | chr5:15657802-15658584 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-2.0081575,{"$nulls":15},"Os01g0827700","GDSL-motif lipase",2.945836,2.9525023,5.381198,2.6635313,2.6355085,2.995368]
[null,"2.1.2.2","major CHO metabolism.synthesis.starch.starch synthase","Os05g0533600","Transcript","highly similar to ( 982) AT4G18240 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase, transferring glycosyl groups | chr4:10082221-10087044 FORWARDmoderately similar to ( 369) SSY3_SOLTU Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato)glgA GlgA Glyco_transf_5 protein|starch synthase, putative, expressed",1.0277737,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0247100","Transcript","weakly similar to ( 167) AT3G58120 | Symbols: ATBZIP61, BZIP61 | BZIP61; DNA binding / transcription activator/ transcription factor | chr3:21521289-21523078 REVERSEvery weakly similar to (83.6) RF2B_ORYSA Transcription factor RF2b - Oryza sativa (Rice) protein|bZIP transcription factor family protein, putative, expressed",4.0527945,null,31.1,"cell.organisation","Os02g0601700","Transcript","moderately similar to ( 482) AT3G01750 | Symbols: | ankyrin repeat family protein | chr3:270615-272691 FORWARD ANK protein|expressed protein",2.82453,null,"20.2.99","stress.abiotic.unspecified","Os12g0155000","Transcript","moderately similar to ( 206) AT5G38960 | Symbols: | germin-like protein, putative | chr5:15592992-15593783 FORWARDweakly similar to ( 181) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.603726,null,26.6,"misc.O-methyl transferases","Os03g0775000","Transcript","moderately similar to ( 313) AT5G42760 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), O-methyltransferase, N-terminal (InterPro:IPR003455); Has 888 Blast hits to 888 proteins in 139 species: Archae - 36; Bacteria - 741; Metazoa - 23; Fungi - 3; Plants - 27; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr5:17148953-17150105 FORWARDCOG3315 protein|methyltransferase, putative, expressed",3.4512665,{"$nulls":8},"Os07g0642200","GDSL-motif lipase",{"$nulls":3},2.6652136,2.9837646,3.3945007]
[null,"2.2.1.1","major CHO metabolism.degradation.sucrose.fructokinase","Os06g0232200","Transcript","moderately similar to ( 455) AT1G66430 | Symbols: | pfkB-type carbohydrate kinase family protein | chr1:24778400-24780393 FORWARDmoderately similar to ( 352) SCRK2_MAIZE Fructokinase-2 (EC 2.7.1.4) (ZmFRK2) - Zea mays (Maize) bac_FRK PRK09434 PfkB KdgK RbsK ribokinase ribokinase_group_A adenosine_kinase PRK11142 Fructoselysine_kinase_like ribokinase_group_B Guanosine_kinase_like RfaE_like protein|kinase, pfkB family, putative, expressed",1.0679398,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0132500","Transcript","very weakly similar to (88.6) AT1G75390 | Symbols: AtbZIP44 | AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44); DNA binding / protein heterodimerization/ transcription factor | chr1:28292224-28292665 FORWARD protein|CPuORF1 - conserved peptide uORF-containing transcript, expressed",-1.4448551,null,31.1,"cell.organisation","Os04g0692100","Transcript","moderately similar to ( 326) AT3G10220 | Symbols: | tubulin folding cofactor B | chr3:3161977-3164037 FORWARD CAP_GLY Alp11_N protein|tubulin folding cofactor B, putative, expressed",-1.1458529,{"$nulls":8},26.6,"misc.O-methyl transferases","Os05g0515600","Transcript","weakly similar to ( 182) AT4G35160 | Symbols: | O-methyltransferase family 2 protein | chr4:16730989-16732808 REVERSEmoderately similar to ( 444) ZRP4_MAIZE O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) - Zea mays (Maize) Methyltransf_2 protein|O-methyltransferase, putative, expressed",5.9088807,{"$nulls":8},"Os02g0740400","GDSL-motif lipase",{"$nulls":3},2.6899033,2.7772436,4.168103]
[null,"2.2.1.1","major CHO metabolism.degradation.sucrose.fructokinase","Os01g0851000","Transcript","highly similar to ( 559) AT3G54090 | Symbols: | pfkB-type carbohydrate kinase family protein | chr3:20028145-20029835 FORWARDweakly similar to ( 178) SCRK_SOLTU Fructokinase (EC 2.7.1.4) - Solanum tuberosum (Potato) bac_FRK KdgK PfkB RbsK PRK09434 ribokinase protein|kinase, pfkB family, putative, expressed",1.4919344,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os10g0531900","Transcript","weakly similar to ( 183) AT4G38900 | Symbols: | bZIP protein | chr4:18139564-18141520 REVERSEweakly similar to ( 120) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|bZIP family transcription factor, putative, expressed",3.415385,null,31.1,"cell.organisation","Os01g0514600","Transcript","highly similar to ( 806) AT5G48460 | Symbols: | fimbrin-like protein, putative | chr5:19636225-19639365 REVERSE SAC6 CH CH protein|fimbrin-like protein 2, putative, expressed",3.9300988,null,31.2,"cell.division","Os09g0515100","Transcript","nearly identical (1078) AT1G05910 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARDmoderately similar to ( 219) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) RPT1 PRK03992 SpoVK AAA HflB hflB COG1223 BROMO protein|bromodomain protein 103, putative, expressed",-1.4211426,{"$nulls":15},"Os03g0683800","GDSL-motif lipase",{"$nulls":3},2.6994843,0.77519226,2.4378457]
[null,"2.2.1.4","major CHO metabolism.degradation.sucrose.hexokinase","Os07g0197100","Transcript","highly similar to ( 535) AT1G47840 | Symbols: HXK3 | HXK3 (HEXOKINASE 3); ATP binding / fructokinase/ glucokinase/ hexokinase | chr1:17616243-17618859 REVERSEhighly similar to ( 872) HXK4_ORYSA Hexokinase-4, chloroplast precursor (EC 2.7.1.1) (Hexokinase II) - Oryza sativa (Rice) COG5026 Hexokinase_1 Hexokinase_2 protein|hexokinase, putative, expressed",-1.2687383,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os04g0495500","Transcript","weakly similar to ( 186) AT1G06070 | Symbols: | bZIP transcription factor, putative (bZIP69) | chr1:1835201-1837116 REVERSEweakly similar to ( 187) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|transcription factor RF2a, putative, expressed",1.9407967,null,31.1,"cell.organisation","Os03g0783000","Transcript","moderately similar to ( 387) AT3G60830 | Symbols: ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton | chr3:22474298-22476000 FORWARDweakly similar to ( 159) ACT12_SOLTU Actin-100 (Fragment) - Solanum tuberosum (Potato) ACTIN ACTIN Actin COG5277 protein|actin, putative, expressed",-0.96566933,null,31.2,"cell.division","Os01g0846800","Transcript","highly similar to ( 509) AT3G55580 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD ATS1 protein|regulator of chromosome condensation, putative, expressed",-1.3124882,null,26.28,"misc.GDSL-motif lipase","Os06g0351500","Transcript","weakly similar to ( 181) AT1G75880 | Symbols: | family II extracellular lipase 1 (EXL1) | chr1:28490564-28492298 FORWARDweakly similar to ( 149) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.257059,{"$nulls":8},"Os05g0134400","Peroxidases",1.9375277,3.7376604,3.8449574,2.7075577,3.438694,4.776332]
[null,"2.2.1.5","major CHO metabolism.degradation.sucrose.Susy","Os03g0401300","Transcript","nearly identical (1264) AT3G43190 | Symbols: SUS4, ATSUS4 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | chr3:15179204-15182577 REVERSEnearly identical (1717) SUS2_ORYSA Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Oryza sativa (Rice) Sucrose_synth Glycos_transf_1 RfaG protein|sucrose synthase, putative, expressed",2.328625,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0128200","Transcript","weakly similar to ( 151) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDmoderately similar to ( 328) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR bZIP_1 BRLZ protein|transcription factor, putative, expressed",1.7083406,null,31.1,"cell.organisation","Os02g0457500","Transcript","moderately similar to ( 459) AT5G14230 | Symbols: | protein binding | chr5:4591883-4595775 FORWARD ANK protein|ankyrin repeat family protein, putative, expressed",2.5312507,null,31.2,"cell.division","Os01g0700200","Transcript","highly similar to ( 984) AT4G14368 | Symbols: | zinc ion binding | chr4:8274313-8278810 REVERSE ATS1 protein|regulator of chromosome condensation, putative, expressed",2.221728,null,26.28,"misc.GDSL-motif lipase","Os04g0507700","Transcript","moderately similar to ( 480) AT3G04290 | Symbols: ATLTL1, LTL1 | LTL1 (LI-TOLERANT LIPASE 1); carboxylesterase/ hydrolase, acting on ester bonds | chr3:1133620-1136223 REVERSEweakly similar to ( 154) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.9769448,{"$nulls":8},"Os06g0573600","Gluco-, Galacto- and mannosidases.beta-Galactosidase",1.7371373,2.741572,2.8704867,2.733285,2.696638,4.4033475]
[null,"2.2.1.5","major CHO metabolism.degradation.sucrose.Susy","Os04g0249500","Transcript","nearly identical (1094) AT1G73370 | Symbols: SUS6, ATSUS6 | SUS6 (SUCROSE SYNTHASE 6); UDP-glycosyltransferase/ sucrose synthase | chr1:27584533-27588326 REVERSEhighly similar to ( 906) SUS2_PEA Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) Sucrose_synth Glycos_transf_1 RfaG protein|sucrose synthase, putative, expressed",2.5045419,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0176900","Transcript","moderately similar to ( 252) AT5G10030 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor | chr5:3137648-3139295 REVERSEmoderately similar to ( 226) TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-1.2607719,null,31.1,"cell.organisation","Os09g0133600","Transcript","moderately similar to ( 311) AT4G04020 | Symbols: FIB | FIB (FIBRILLIN); structural molecule | chr4:1932161-1933546 FORWARDmoderately similar to ( 474) PAP2_ORYSA Probable plastid-lipid-associated protein 2, chloroplast precursor (Fibrillin-like protein 2) - Oryza sativa (Rice)PAP_fibrillin protein|PAP fibrillin family domain containing protein, expressed",-1.5827652,null,31.2,"cell.division","Os05g0579800","Transcript","moderately similar to ( 291) AT2G18290 | Symbols: APC10 | anaphase-promoting complex, subunit 10 family / APC10 family | chr2:7948522-7950096 REVERSE APC10 DOC1 protein|anaphase-promoting complex subunit 10, putative, expressed",-0.989391,null,26.28,"misc.GDSL-motif lipase","Os01g0649900","Transcript","weakly similar to ( 174) AT1G28590 | Symbols: | lipase, putative | chr1:10047509-10049300 REVERSEvery weakly similar to (96.3) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.853714,{"$nulls":8},"Os05g0191500","acid and other phosphatases",2.9099746,2.2232857,2.043653,2.74612,3.3620734,3.2872767]
[null,"2.2.2.1","major CHO metabolism.degradation.starch.starch cleavage","Os08g0473900","Transcript","moderately similar to ( 488) AT4G25000 | Symbols: ATAMY1, AMY1 | AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase | chr4:12852109-12853825 REVERSEhighly similar to ( 830) AMY3D_ORYSA Alpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) Alpha-amylase PRK09441 Alpha-amyl_C2 Aamy AmyA protein|alpha-amylase precursor, putative, expressed",3.305474,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0203000","Transcript","weakly similar to ( 113) AT5G11260 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5); DNA binding / double-stranded DNA binding / transcription factor | chr5:3593583-3594800 REVERSE protein|bZIP transcription factor domain containing protein, expressed",3.6010208,{"$nulls":8},31.2,"cell.division","Os07g0570700","Transcript","weakly similar to ( 189) AT3G63190 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSEweakly similar to ( 197) RRFC_SPIOL Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) - Spinacia oleracea (Spinach) frr Frr RRF RRF protein|ribosome recycling factor, putative, expressed",1.8791462,null,26.28,"misc.GDSL-motif lipase","Os06g0156600","Transcript","moderately similar to ( 292) AT5G45910 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:18620420-18622264 REVERSEweakly similar to ( 162) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.786473,{"$nulls":8},"Os07g0510900","oxidases - copper, flavone etc.",{"$nulls":3},2.74644,2.307456,3.6439724]
[null,"2.2.2.1.1","major CHO metabolism.degradation.starch.starch cleavage.alpha amylase","Os01g0715400","Transcript","moderately similar to ( 388) AT1G69830 | Symbols: ATAMY3, AMY3 | AMY3 (ALPHA-AMYLASE-LIKE 3); alpha-amylase | chr1:26288518-26293003 REVERSEvery weakly similar to (84.3) AMY3_WHEAT Alpha-amylase AMY3 precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Triticum aestivum (Wheat) protein|alpha-amylase precursor, putative, expressed",1.0224143,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0519800","Transcript","highly similar to ( 615) AT3G20250 | Symbols: APUM5 | APUM5 (Arabidopsis Pumilio 5); RNA binding / binding | chr3:7059098-7062660 REVERSE DUF632 COG5099 DUF630 protein|pumilio domain-containing protein PPD1, putative, expressed",-0.9846638,null,31.4,"cell.vesicle transport","Os04g0612600","Transcript","moderately similar to ( 386) AT1G30630 | Symbols: | coatomer protein epsilon subunit family protein / COPE family protein | chr1:10858546-10860173 REVERSE Coatomer_E protein|coatomer subunit epsilon, putative, expressed",-1.1847388,null,31.2,"cell.division","Os04g0462900","Transcript","moderately similar to ( 326) AT5G40770 | Symbols: ATPHB3 | ATPHB3 (PROHIBITIN 3) | chr5:16315589-16316621 REVERSE Band_7_prohibitin PHB Band_7 HflC protein|prohibitin, putative, expressed",-1.0250721,null,26.28,"misc.GDSL-motif lipase","Os07g0642200","Transcript","moderately similar to ( 270) AT1G28600 | Symbols: | lipase, putative | chr1:10051604-10053073 REVERSEweakly similar to ( 152) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.014493,{"$nulls":8},"Os05g0515600","O-methyl transferases",4.551461,9.283565,10.193374,2.772634,6.6916986,8.26231]
[null,"2.2.2.2","major CHO metabolism.degradation.starch.starch phosphorylase","Os01g0851700","Transcript","nearly identical (1365) AT3G46970 | Symbols: ATPHS2, PHS2 | PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2); phosphorylase/ transferase, transferring glycosyl groups | chr3:17301625-17306111 REVERSEnearly identical (1554) PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Triticum aestivum (Wheat) Phosphorylase GlgP protein|alpha-glucan phosphorylast isozyme, putative, expressed",1.7281233,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os12g0233800","Transcript","moderately similar to ( 206) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDweakly similar to ( 154) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR BRLZ bZIP_1 protein|transcription factor, putative, expressed",-1.4053911,null,31.4,"cell.vesicle transport","Os11g0649900","Transcript","weakly similar to ( 113) AT5G59730 | Symbols: ATEXO70H7 | ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7); protein binding | chr5:24064096-24066004 REVERSE Exo70 protein|exo70 exocyst complex subunit, putative, expressed",1.648172,null,31.2,"cell.division","Os08g0430700","Transcript","highly similar to ( 544) AT5G16040 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr5:5240860-5243308 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.0921475,null,26.28,"misc.GDSL-motif lipase","Os02g0101400","Transcript","moderately similar to ( 298) AT1G75900 | Symbols: | family II extracellular lipase 3 (EXL3) | chr1:28499179-28500943 FORWARDweakly similar to ( 186) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.2243428,{"$nulls":8},"Os03g0329500","Gluco-, Galacto- and mannosidases.endoGlucanase",1.5102549,2.736536,3.1419039,2.7871351,2.4796066,2.8532906]
[null,"2.2.2.3","major CHO metabolism.degradation.starch.glucan water dikinase","Os12g0297500","Transcript","nearly identical (1337) AT5G26570 | Symbols: PWD, OK1, ATGWD3 | ATGWD3; carbohydrate kinase/ catalytic/ phosphoglucan, water dikinase | chr5:9261580-9266463 FORWARDnearly identical (2348) PWD_ORYSA Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) - Oryza sativa (Rice)PRK06241 PPDK_N PpsA PRK06464 protein|phosphoglucan, water dikinase, chloroplast precursor, putative, expressed",-1.2831146,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os09g0489500","Transcript","moderately similar to ( 338) AT5G06839 | Symbols: | bZIP family transcription factor | chr5:2120911-2126217 FORWARDmoderately similar to ( 300) TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-2.236131,null,31.4,"cell.vesicle transport","Os05g0378900","Transcript","highly similar to ( 771) AT1G67930 | Symbols: | Golgi transport complex protein-related | chr1:25474218-25477332 REVERSE protein|golgi transport complex protein-related, putative, expressed",-1.2834529,null,31.2,"cell.division","Os04g0583700","Transcript","highly similar to ( 659) AT1G65920 | Symbols: | regulator of chromosome condensation (RCC1) family protein / zinc finger protein-related | chr1:24525267-24529204 REVERSE ATS1 protein|ZR1 protein, putative, expressed",2.5869057,null,26.28,"misc.GDSL-motif lipase","Os01g0827700","Transcript","moderately similar to ( 324) AT1G58430 | Symbols: RXF26 | RXF26; carboxylesterase/ hydrolase, acting on ester bonds | chr1:21711684-21712992 REVERSEmoderately similar to ( 204) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 Triacylglycerol_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.7648027,{"$nulls":8},"Os01g0191200","acid and other phosphatases",{"$nulls":3},2.7970986,4.302041,4.77526]
[null,"2.2.2.6","major CHO metabolism.degradation.starch.transporter","Os04g0602400","Transcript","moderately similar to ( 357) AT5G17520 | Symbols: RCP1, MEX1 | RCP1 (ROOT CAP 1); maltose transmembrane transporter | chr5:5772796-5775231 REVERSEhighly similar to ( 583) MEX1_ORYSA Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) protein|maltose excess protein 1-like, chloroplast precursor, putative, expressed",1.453833,null,"27.3.36","RNA.regulation of transcription.Argonaute","Os01g0275600","Transcript","nearly identical (1214) AT2G27040 | Symbols: AGO4, OCP11 | AGO4 (ARGONAUTE 4); nucleic acid binding | chr2:11536795-11541503 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|argonaute, putative, expressed",1.4471418,null,31.4,"cell.vesicle transport","Os12g0104800","Transcript","nearly identical (3023) AT3G11130 | Symbols: | clathrin heavy chain, putative | chr3:3482575-3491667 REVERSE CLH Clathrin protein|clathrin heavy chain, putative, expressed",-1.286427,null,31.2,"cell.division","Os02g0554100","Transcript","highly similar to ( 622) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",2.4206684,null,26.28,"misc.GDSL-motif lipase","Os03g0683800","Transcript","moderately similar to ( 367) AT5G03810 | Symbols: | carboxylesterase/ hydrolase, acting on ester bonds / lipase | chr5:1013939-1015345 REVERSEweakly similar to ( 194) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.9708408,{"$nulls":8},"Os09g0511900","Gluco-, Galacto- and mannosidases",3.712119,5.435792,6.303127,2.8546143,2.8875856,5.1443777]
[{"$nulls":8},"27.3.39","RNA.regulation of transcription.AtSR Transcription Factor family","Os03g0851700","Transcript","moderately similar to ( 347) AT4G35450 | Symbols: AKR2, AFT, AKR2A | AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding | chr4:16839862-16841759 FORWARD ANK protein|ankyrin repeat domain containing protein, expressed",1.7291578,null,31.4,"cell.vesicle transport","Os03g0736500","Transcript","moderately similar to ( 268) AT1G08560 | Symbols: SYP111, KN, ATSYP111 | SYP111 (SYNTAXIN OF PLANTS 111); SNAP receptor | chr1:2709778-2710710 REVERSE SynN COG5074 protein|syntaxin-related protein, putative, expressed",4.2236824,null,31.2,"cell.division","Os04g0676000","Transcript","highly similar to ( 647) AT3G19180 | Symbols: ARC6H, PARC6 | ARC6H | chr3:6632810-6636547 FORWARD protein|OsFBX154 - F-box domain containing protein, expressed",0.97781354,null,26.28,"misc.GDSL-motif lipase","Os06g0725200","Transcript","weakly similar to ( 154) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 103) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.7445822,{"$nulls":8},"Os06g0149100","GDSL-motif lipase",1.23247,4.6164103,5.4050183,2.880987,4.775669,6.5053353]
[null,"3.2.2","minor CHO metabolism.trehalose.TPP","Os12g0505800","Transcript","moderately similar to ( 249) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase OtsB protein|trehalose phosphatase, putative, expressed",2.293911,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0190300","Transcript","weakly similar to ( 125) AT3G16500 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor | chr3:5612801-5614208 REVERSEweakly similar to ( 197) IAA2_ORYSA Auxin-responsive protein IAA2 (Indoleacetic acid-induced protein 2) - Oryza sativa (Rice)AUX_IAA protein|OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed",1.2362556,null,31.4,"cell.vesicle transport","Os06g0143900","Transcript","moderately similar to ( 410) AT3G15980 | Symbols: | coatomer protein complex, subunit beta 2 (beta prime), putative | chr3:5412015-5418313 REVERSE Coatomer_WDAD protein|coatomer subunit beta, putative, expressed",-0.9528351,null,31.2,"cell.division","Os04g0435700","Transcript","highly similar to ( 586) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.2835745,null,26.28,"misc.GDSL-motif lipase","Os01g0215500","Transcript","moderately similar to ( 220) AT2G27360 | Symbols: | lipase, putative | chr2:11706233-11707905 FORWARDweakly similar to ( 124) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",-1.176582,{"$nulls":8},"Os06g0695500","Peroxidases",1.9667339,3.581811,3.6737976,2.9053483,3.5231633,2.3752275]
[null,"3.2.2","minor CHO metabolism.trehalose.TPP","Os05g0128900","Transcript","moderately similar to ( 276) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase OtsB protein|trehalose phosphatase, putative, expressed",2.016027,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0231000","Transcript","weakly similar to ( 183) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 343) IAA3_ORYSA Auxin-responsive protein IAA3 (Indoleacetic acid-induced protein 3) - Oryza sativa (Rice)AUX_IAA protein|OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed",1.1733681,null,31.4,"cell.vesicle transport","Os02g0209000","Transcript","nearly identical (1511) AT1G79990 | Symbols: | protein binding / structural molecule | chr1:30085910-30091949 FORWARDvery weakly similar to (92.8) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii Coatomer_WDAD WD40 COG2319 protein|coatomer subunit beta, putative, expressed",-1.1169,null,"31.2.5","cell.division.plastid","Os02g0834700","Transcript","moderately similar to ( 384) AT2G21280 | Symbols: GC1, ATSULA, SULA | SULA; binding / catalytic/ coenzyme binding | chr2:9110502-9112679 REVERSE COG1090 WcaG Epimerase protein|cell division inhibitor, putative, expressed",3.2026384,null,26.28,"misc.GDSL-motif lipase","Os03g0581400","Transcript","moderately similar to ( 202) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 120) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",5.1556945,{"$nulls":8},"Os12g0530100","Peroxidases",{"$nulls":3},2.9284759,3.1056595,4.356467]
[null,"3.2.2","minor CHO metabolism.trehalose.TPP","Os05g0153500","Transcript","weakly similar to ( 198) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase protein|trehalose phosphatase, putative, expressed",1.9211913,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os06g0597000","Transcript","weakly similar to ( 112) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 210) IAA23_ORYSA Auxin-responsive protein IAA23 (Indoleacetic acid-induced protein 23) - Oryza sativa (Rice)AUX_IAA protein|OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed",1.4440836,null,31.4,"cell.vesicle transport","Os11g0104933","Transcript","nearly identical (3021) AT3G11130 | Symbols: | clathrin heavy chain, putative | chr3:3482575-3491667 REVERSE CLH Clathrin protein|clathrin heavy chain, putative, expressed",-1.0688547,{"$nulls":8},26.28,"misc.GDSL-motif lipase","Os05g0419800","Transcript","moderately similar to ( 428) AT1G71691 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:26949395-26951173 REVERSEweakly similar to ( 148) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 Triacylglycerol_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.8321915,{"$nulls":8},"Os08g0509400","Gluco-, Galacto- and mannosidases",2.7786884,4.734042,4.4249516,2.967986,4.0216694,4.8372593]
[null,"3.2.3","minor CHO metabolism.trehalose.potential TPS/TPP","Os12g0505800","Transcript","moderately similar to ( 249) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase OtsB protein|trehalose phosphatase, putative, expressed",2.293911,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os05g0230700","Transcript","weakly similar to ( 188) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 348) IAA17_ORYSA Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) - Oryza sativa (Rice)AUX_IAA protein|OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed",1.7808269,null,31.4,"cell.vesicle transport","Os03g0803000","Transcript","moderately similar to ( 345) AT2G32670 | Symbols: ATVAMP725, VAMP725 | ATVAMP725 | chr2:13857941-13859346 FORWARD Synaptobrevin protein|vesicle-associated membrane protein, putative, expressed",-1.0174967,null,31.3,"cell.cycle","Os03g0123300","Transcript","highly similar to ( 608) AT4G22910 | Symbols: FZR2 | FZR2 (FIZZY-RELATED 2); signal transducer | chr4:12012743-12015663 FORWARD WD40 COG2319 protein|WD repeat-containing protein, putative, expressed",1.0072118,null,26.28,"misc.GDSL-motif lipase","Os04g0577300","Transcript","moderately similar to ( 208) AT5G41890 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:16764292-16766900 REVERSESGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.2343721,{"$nulls":8},"Os04g0269600","oxidases - copper, flavone etc.",-1.8659205,-2.983992,-4.0887027,2.9752107,1.925281,2.4361424]
[null,"3.2.3","minor CHO metabolism.trehalose.potential TPS/TPP","Os08g0414700","Transcript","nearly identical (1152) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Glyco_transf_20 OtsA Trehalose_PPase PRK10117 OtsB protein|trehalose-6-phosphate synthase, putative, expressed",2.293911,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os07g0182400","Transcript","weakly similar to ( 140) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 320) IAA24_ORYSA Auxin-responsive protein IAA24 (Indoleacetic acid-induced protein 24) - Oryza sativa (Rice)AUX_IAA protein|OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed",1.0804805,null,31.4,"cell.vesicle transport","Os03g0711400","Transcript","nearly identical (1550) AT1G62020 | Symbols: | coatomer protein complex, subunit alpha, putative | chr1:22919814-22923728 FORWARDweakly similar to ( 105) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii COPI_C Coatomer_WDAD WD40 COG2319 protein|coatomer alpha subunit, putative, expressed",-1.3364779,null,31.3,"cell.cycle","Os01g0805600","Transcript","moderately similar to ( 340) AT5G06150 | Symbols: CYC1BAT, CYCB1;2 | CYC1BAT; cyclin-dependent protein kinase regulator | chr5:1859542-1861570 REVERSEmoderately similar to ( 366) CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) Cyclin_N COG5024 Cyclin_C CYCLIN protein|cyclin, putative, expressed",3.2416708,null,26.28,"misc.GDSL-motif lipase","Os06g0148200","Transcript","moderately similar to ( 429) AT3G16370 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:5556928-5558351 FORWARDweakly similar to ( 185) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.028175,{"$nulls":8},"Os01g0378100","Peroxidases",4.003407,6.1022787,6.0746536,2.976088,1.7869911,4.154945]
[null,"3.2.3","minor CHO metabolism.trehalose.potential TPS/TPP","Os05g0128900","Transcript","moderately similar to ( 276) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase OtsB protein|trehalose phosphatase, putative, expressed",2.016027,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0511500","Transcript","highly similar to ( 508) AT1G05120 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1471624-1476067 REVERSEvery weakly similar to (89.0) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) HepA HELICc protein|DNA repair protein rhp16, putative, expressed",-1.1601919,null,31.4,"cell.vesicle transport","Os01g0355500","Transcript","moderately similar to ( 267) AT4G12770 | Symbols: | heat shock protein binding | chr4:7506736-7511408 REVERSE TolA tolA TolA PRK05035 protein|auxilin, putative, expressed",-1.2626818,null,31.3,"cell.cycle","Os04g0563700","Transcript","moderately similar to ( 434) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEmoderately similar to ( 468) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C CYCLIN protein|cyclin, putative, expressed",2.7577922,null,26.28,"misc.GDSL-motif lipase","Os02g0740400","Transcript","weakly similar to ( 116) AT1G71250 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:26860125-26861582 FORWARDSGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.21175,{"$nulls":8},"Os07g0468100","Glutathione S transferases",{"$nulls":3},3.1267505,2.044805,2.8911023]
[null,"3.2.3","minor CHO metabolism.trehalose.potential TPS/TPP","Os05g0153500","Transcript","weakly similar to ( 198) AT1G60140 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase | chr1:22177246-22180073 REVERSE Trehalose_PPase protein|trehalose phosphatase, putative, expressed",1.9211913,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0434500","Transcript","highly similar to ( 743) AT2G16390 | Symbols: DRD1, CHR35, DMS1 | DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding | chr2:7097638-7101096 FORWARD HepA SNF2_N protein|DRD1, putative, expressed",1.2663385,null,31.4,"cell.vesicle transport","Os01g0833700","Transcript","highly similar to ( 576) AT5G05010 | Symbols: | clathrin adaptor complexes medium subunit-related | chr5:1477137-1479872 FORWARDhighly similar to ( 873) COPD_ORYSA Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) Adap_comp_sub protein|coatomer subunit delta, putative, expressed",-1.2082494,null,31.3,"cell.cycle","Os03g0308200","Transcript","highly similar to ( 835) AT5G26850 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cyclin-related (TAIR:AT2G41830.1); Has 199 Blast hits to 197 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 19; Plants - 59; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:9445950-9450584 FORWARD protein|cyclin-related protein, putative, expressed",1.3246378,null,26.28,"misc.GDSL-motif lipase","Os01g0214600","Transcript","moderately similar to ( 298) AT5G45910 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:18620420-18622264 REVERSEweakly similar to ( 150) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.436472,{"$nulls":8},"Os05g0190500","acid and other phosphatases",5.373212,12.221179,12.839553,3.1304827,6.9134283,10.470948]
[null,3.3,"minor CHO metabolism.sugar alcohols","Os02g0177900","Transcript","highly similar to ( 940) AT4G30310 | Symbols: | ribitol kinase, putative | chr4:14831913-14835092 FORWARD AraB PRK04123 XylB FGGY_N FGGY_C GlpK protein|FGGY family of carbohydrate kinases, putative, expressed",1.1570023,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os05g0150300","Transcript","nearly identical (1538) AT3G06400 | Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | chr3:1941066-1946700 FORWARDnearly identical (1650) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) SNF2_N HepA SLIDE HELICc DEXDc DEXHc HELICc Helicase_C DEXDc protein|chromatin-remodeling complex ATPase chain, putative, expressed",-1.140707,null,31.4,"cell.vesicle transport","Os06g0168500","Transcript","moderately similar to ( 275) AT5G08080 | Symbols: SYP132, ATSYP132 | SYP132 (SYNTAXIN OF PLANTS 132); SNAP receptor | chr5:2588532-2590488 FORWARD SynN protein|syntaxin, putative, expressed",-1.4581944,null,31.3,"cell.cycle","Os03g0617500","Transcript","weakly similar to ( 111) AT4G37630 | Symbols: CYCD5;1 | CYCD5;1 (cyclin d5;1); cyclin-dependent protein kinase | chr4:17679497-17680788 FORWARD Cyclin_N protein|cyclin, putative, expressed",2.2747788,null,26.28,"misc.GDSL-motif lipase","Os01g0650200","Transcript","moderately similar to ( 218) AT1G28600 | Symbols: | lipase, putative | chr1:10051604-10053073 REVERSEweakly similar to ( 108) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",-1.3373656,{"$nulls":8},"Os09g0264400","cytochrome P450",4.3765445,5.62479,5.7863135,3.2606716,3.666615,5.2053995]
[null,"3.4.4","minor CHO metabolism.myo-inositol.myo inositol oxygenases","Os06g0561000","Transcript","moderately similar to ( 480) AT1G14520 | Symbols: MIOX1 | MIOX1 (MYO-INISITOL OXYGENASE); inositol oxygenase/ oxidoreductase | chr1:4968376-4969954 REVERSEhighly similar to ( 625) MIOX_ORYSA Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase) - Oryza sativa (Rice) DUF706 protein|inositol oxygenase, putative, expressed",4.2721057,null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os11g0463600","Transcript","weakly similar to ( 164) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0070429,null,31.4,"cell.vesicle transport","Os02g0803600","Transcript","moderately similar to ( 284) AT4G32150 | Symbols: VAMP711, ATVAMP711 | ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) | chr4:15526407-15527651 REVERSE Synaptobrevin protein|vesicle-associated membrane protein, putative, expressed",-1.9311813,null,31.3,"cell.cycle","Os09g0466100","Transcript","weakly similar to ( 190) AT5G65420 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | chr5:26141592-26143750 REVERSE Cyclin_N protein|cyclin, putative, expressed",1.4984407,null,26.28,"misc.GDSL-motif lipase","Os02g0669000","Transcript","weakly similar to ( 191) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 135) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.3259596,{"$nulls":8},"Os06g0294600","cytochrome P450",{"$nulls":3},3.268258,1.6061635,3.659902]
[null,"3.4.5","minor CHO metabolism.myo-inositol.inositol phosphatase","Os02g0169900","Transcript","moderately similar to ( 474) AT1G31190 | Symbols: IMPL1 | IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase/ inositol-1(or 4)-monophosphatase | chr1:11144861-11146800 FORWARDweakly similar to ( 140) IMPP_MESCR Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) IMPase Inositol_P SuhB IMPase_like PRK10757 Bacterial_IMPase_like_2 PRK12676 Bacterial_IMPase_like_1 CysQ Arch_FBPase_1 PAP_phosphatase CysQ Arch_FBPase_2 protein|inositol-1-monophosphatase, putative, expressed",1.8686079,null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os08g0528900","Transcript","moderately similar to ( 378) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0100232,null,31.4,"cell.vesicle transport","Os02g0126800","Transcript","moderately similar to ( 300) AT2G45200 | Symbols: GOS12, ATGOS12 | GOS12 (GOLGI SNARE 12); SNARE binding | chr2:18637689-18639640 REVERSE V-SNARE protein|vesicle transport v-SNARE protein, putative, expressed",-0.9907568,null,31.3,"cell.cycle","Os06g0726800","Transcript","moderately similar to ( 422) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEhighly similar to ( 808) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C protein|cyclin, putative, expressed",2.0030484,null,26.28,"misc.GDSL-motif lipase","Os07g0586200","Transcript","moderately similar to ( 258) AT3G26430 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:9674419-9675889 FORWARDmoderately similar to ( 202) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.156663,{"$nulls":8},"Os06g0549300","nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases",5.3921027,5.0935845,5.375382,3.2933874,2.7710776,3.3183904]
[null,3.5,"minor CHO metabolism.others","Os01g0658700","Transcript","highly similar to ( 506) AT3G61610 | Symbols: | aldose 1-epimerase family protein | chr3:22799480-22801029 FORWARD COG0676 Aldose_epim protein|aldose 1-epimerase, putative, expressed",1.6321597,null,"27.3.49","RNA.regulation of transcription.GeBP like","Os12g0242800","Transcript","weakly similar to ( 149) AT5G14280 | Symbols: | DNA-binding storekeeper protein-related | chr5:4609123-4611444 FORWARD protein|DNA-binding storekeeper protein-related, putative, expressed",1.9528753,null,31.4,"cell.vesicle transport","Os09g0439600","Transcript","highly similar to ( 561) AT1G72470 | Symbols: ATEXO70D1 | ATEXO70D1 (exocyst subunit EXO70 family protein D1); protein binding | chr1:27283759-27285660 FORWARD Exo70 protein|exo70 exocyst complex subunit, putative, expressed",-1.0782857,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os09g0501850","Transcript","moderately similar to ( 206) AT3G25220 | Symbols: FKBP15-1 | FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase | chr3:9182691-9184463 FORWARDweakly similar to ( 195) FKB15_VICFA FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) FKBP_C FkpA PRK11570 PRK10902 protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",-0.9592638,null,26.28,"misc.GDSL-motif lipase","Os06g0149100","Transcript","weakly similar to ( 168) AT3G16370 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:5556928-5558351 FORWARDvery weakly similar to (95.5) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.7206635,{"$nulls":8},"Os05g0375400","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",{"$nulls":3},3.3528914,3.3752394,2.757886]
[null,3.5,"minor CHO metabolism.others","Os08g0566400","Transcript","moderately similar to ( 423) AT4G28706 | Symbols: | pfkB-type carbohydrate kinase family protein | chr4:14167805-14170619 FORWARD ribokinase_group_B RbsK PfkB ribokinase_group_A ribokinase bac_FRK adenosine_kinase KdgK Ketohexokinase protein|kinase, pfkB family, putative, expressed",2.9968693,null,"27.3.50","RNA.regulation of transcription.General Transcription","Os08g0532500","Transcript","weakly similar to ( 172) AT4G35540 | Symbols: | transcription regulator/ zinc ion binding | chr4:16873939-16875522 FORWARD protein|zinc ion binding protein, putative, expressed",-1.0528625,null,31.4,"cell.vesicle transport","Os03g0787000","Transcript","moderately similar to ( 293) AT3G11820 | Symbols: SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1 | SYP121 (SYNTAXIN OF PLANTS 121); SNAP receptor/ protein anchor | chr3:3729540-3730868 REVERSE SynN COG5074 protein|syntaxin, putative, expressed",-1.30061,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os04g0352400","Transcript","highly similar to ( 688) AT3G25230 | Symbols: ROF1, ATFKBP62, FKBP62 | ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | chr3:9188257-9191175 FORWARDhighly similar to ( 661) FKB70_WHEAT 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) FKBP_C FkpA PRK10902 PRK11570 protein|peptidyl-prolyl isomerase, putative, expressed",-1.4278479,null,26.28,"misc.GDSL-motif lipase","Os01g0329900","Transcript","moderately similar to ( 378) AT1G09390 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:3031264-3033415 FORWARDmoderately similar to ( 243) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.9643126,{"$nulls":8},"Os05g0191700","acid and other phosphatases",{"$nulls":3},3.3654242,2.195878,3.0949368]
[null,3.5,"minor CHO metabolism.others","Os04g0568600","Transcript","weakly similar to ( 150) AT5G52190 | Symbols: | sugar isomerase (SIS) domain-containing protein | chr5:21201817-21202443 REVERSEGutQ protein|3-hexulose-6-phosphate isomerase, putative, expressed",2.7249243,null,"27.3.54","RNA.regulation of transcription.Histone acetyltransferases","Os04g0484900","Transcript","highly similar to ( 993) AT5G50320 | Symbols: ELO3, HAG3, HAC8 | ELO3 (ELONGATA 3); histone acetyltransferase | chr5:20481200-20484811 REVERSEnearly identical (1061) ELP3_ORYSA Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) ELP3 COG1242 Elp3 protein|elongator complex protein 3, putative, expressed",-0.9539693,null,31.4,"cell.vesicle transport","Os03g0227000","Transcript","nearly identical (1310) AT4G34450 | Symbols: | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD SEC21 Adaptin_N Gamma-COP protein|coatomer subunit gamma-1, putative, expressed",-1.2748643,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os06g0708500","Transcript","moderately similar to ( 295) AT5G58710 | Symbols: ROC7 | ROC7; peptidyl-prolyl cis-trans isomerase | chr5:23717840-23719495 FORWARDmoderately similar to ( 217) CYPH_CATRO Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_SpCYP2_like cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_CeCYP16-like cyclophilin_RRM protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",-1.2119535,{"$nulls":15},"Os03g0359600","UDP glucosyl and glucoronyl transferases",2.2648268,1.4294567,1.5777726,3.3687887,2.0849814,3.6721964]
[null,3.5,"minor CHO metabolism.others","Os05g0456300","Transcript","moderately similar to ( 420) AT2G37790 | Symbols: | aldo/keto reductase family protein | chr2:15838838-15840752 FORWARDmoderately similar to ( 250) ALDR_HORVU Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) Aldo_ket_red ARA1 dkgB dkgA Tas protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",7.4999757,null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os09g0551600","Transcript","very weakly similar to (93.2) AT1G20696 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181170 FORWARDvery weakly similar to (99.4) HMGL_IPONI HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|HMG1/2, putative, expressed",2.2946422,null,31.4,"cell.vesicle transport","Os06g0698600","Transcript","highly similar to ( 701) AT4G31540 | Symbols: ATEXO70G1 | ATEXO70G1 (exocyst subunit EXO70 family protein G1); protein binding | chr4:15284739-15286802 REVERSE Exo70 protein|ATEXO70G1, putative, expressed",-1.1868092,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os01g0111100","Transcript","moderately similar to ( 246) AT1G74070 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr1:27851749-27852861 REVERSE cyclophilin Pro_isomerase cyclophilin_ABH_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",4.180256,null,26.12,"misc.peroxidases","Os06g0695500","Transcript","moderately similar to ( 318) AT2G18980 | Symbols: | peroxidase, putative | chr2:8233419-8235294 REVERSEweakly similar to ( 178) PER2_ARAHY Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",2.9345798,{"$nulls":8},"Os08g0106300","cytochrome P450",{"$nulls":3},3.379644,5.7478175,5.485993]
[null,3.5,"minor CHO metabolism.others","Os09g0327400","Transcript","moderately similar to ( 433) AT5G66530 | Symbols: | aldose 1-epimerase family protein | chr5:26553821-26555575 REVERSE COG0676 Aldose_epim protein|aldose 1-epimerase, putative, expressed",1.6139927,null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os08g0108200","Transcript","highly similar to ( 540) AT5G64630 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIATA 2); nucleotide binding / protein binding | chr5:25833298-25836158 FORWARD WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.5532484,null,31.4,"cell.vesicle transport","Os11g0174000","Transcript","nearly identical (1415) AT4G31480 | Symbols: | coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | chr4:15264076-15267384 FORWARD Coatamer_beta_C COG5096 Adaptin_N protein|coatomer subunit beta-1, putative, expressed",-1.2452122,null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os07g0565600","Transcript","highly similar to ( 521) AT3G15520 | Symbols: | peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase | chr3:5249739-5252432 REVERSEweakly similar to ( 131) TLP40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach)cyclophilin_TLP40_like protein|peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed",1.9124368,null,26.12,"misc.peroxidases","Os05g0134400","Transcript","weakly similar to ( 127) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 120) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",3.6408613,{"$nulls":8},"Os11g0683500","Gluco-, Galacto- and mannosidases",4.9136305,5.8400908,3.9785457,3.4252,3.7624931,3.5255485]
[null,3.5,"minor CHO metabolism.others","Os03g0611200","Transcript","moderately similar to ( 362) AT1G04420 | Symbols: | aldo/keto reductase family protein | chr1:1191634-1193699 FORWARD PRK10625 Tas Aldo_ket_red ARA1 COG4989 COG1453 protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",2.3611166,null,"27.3.64","RNA.regulation of transcription.PHOR1","Os02g0540700","Transcript","weakly similar to ( 123) AT3G18710 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29); ubiquitin-protein ligase | chr3:6434234-6435481 REVERSEUbox U-box protein|U-box domain containing protein, expressed",-1.6222826,{"$nulls":8},"31.3.1","cell.cycle.peptidylprolyl isomerase","Os05g0103200","Transcript","moderately similar to ( 293) AT5G13120 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr5:4162714-4164720 REVERSEmoderately similar to ( 221) CYPB_VICFA Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_SpCYP2_like cyclophilin_CeCYP16-like cyclophilin_RRM cyclophilin_EcCYP_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",2.154865,null,26.12,"misc.peroxidases","Os03g0368900","Transcript","moderately similar to ( 218) AT5G58390 | Symbols: | peroxidase, putative | chr5:23599755-23601244 REVERSEmoderately similar to ( 211) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",7.180881,{"$nulls":8},"Os03g0581400","GDSL-motif lipase",4.9069333,4.546067,2.1077108,3.467596,6.2140994,5.785387]
[null,3.5,"minor CHO metabolism.others","Os10g0113100","Transcript","moderately similar to ( 340) AT1G59960 | Symbols: | aldo/keto reductase, putative | chr1:22071410-22073067 REVERSEhighly similar to ( 636) NADO1_ORYSA Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) Aldo_ket_red ARA1 dkgA dkgB Tas COG4989 protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",2.4755752,null,"27.3.66","RNA.regulation of transcription.Psudo ARR transcription factor family","Os09g0532400","Transcript","moderately similar to ( 259) AT5G24470 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator | chr5:8356204-8358873 REVERSEnearly identical (1099) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)Response_reg REC REC AtoC CheY protein|response regulator receiver domain containing protein, expressed",2.290649,null,"29.3.1","protein.targeting.nucleus","Os01g0101300","Transcript","moderately similar to ( 478) AT4G24880 | Symbols: | unknown protein | chr4:12808593-12811218 FORWARD protein|snurportin-1, putative, expressed",-0.9844785,{"$nulls":8},26.12,"misc.peroxidases","Os02g0833900","Transcript","moderately similar to ( 334) AT5G42180 | Symbols: | peroxidase 64 (PER64) (P64) (PRXR4) | chr5:16852702-16854021 FORWARDmoderately similar to ( 228) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",3.2200165,{"$nulls":8},"Os07g0510400","UDP glucosyl and glucoronyl transferases",3.0152197,6.8260193,5.6072283,3.4804196,6.0056825,8.642397]
[null,3.5,"minor CHO metabolism.others","Os03g0237100","Transcript","moderately similar to ( 369) AT1G59960 | Symbols: | aldo/keto reductase, putative | chr1:22071410-22073067 REVERSEmoderately similar to ( 417) NADO1_ORYSA Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) Aldo_ket_red ARA1 dkgA dkgB Tas protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",-1.0076208,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os10g0501300","Transcript","moderately similar to ( 277) AT2G20710 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8926535-8927722 FORWARD protein|pentatricopeptide, putative, expressed",-1.0453898,null,"29.3.1","protein.targeting.nucleus","Os03g0261900","Transcript","moderately similar to ( 416) AT4G27640 | Symbols: | importin beta-2 subunit family protein | chr4:13798013-13802976 REVERSE protein|HEAT repeat family protein, putative, expressed",-0.986502,null,33.1,"development.storage proteins","Os03g0640000","Transcript","weakly similar to ( 144) AT3G54950 | Symbols: PLP7, PLA IIIA | PLA IIIA (PATATIN-LIKE PROTEIN 6) | chr3:20359076-20360774 REVERSE protein|PLA IIIA/PLP7, putative, expressed",1.5056328,null,26.12,"misc.peroxidases","Os05g0135500","Transcript","moderately similar to ( 242) AT1G05260 | Symbols: RCI3, RCI3A | RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase | chr1:1529827-1531271 FORWARDmoderately similar to ( 235) PER2_ARAHY Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",9.636413,{"$nulls":8},"Os01g0946600","beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase",5.4872456,7.319355,7.3128963,3.6592727,3.4002323,4.7997293]
[null,3.5,"minor CHO metabolism.others","Os10g0573000","Transcript","moderately similar to ( 339) AT4G27600 | Symbols: | pfkB-type carbohydrate kinase family protein | chr4:13782753-13785005 REVERSE adenosine_kinase protein|kinase, pfkB family, putative, expressed",2.759031,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os02g0469200","Transcript","highly similar to ( 726) AT5G58100 | Symbols: | unknown protein | chr5:23507828-23514863 FORWARD protein|expressed protein",-1.0693129,null,"29.3.1","protein.targeting.nucleus","Os03g0172000","Transcript","nearly identical (1029) AT1G80680 | Symbols: SAR3, MOS3, PRE, NUP96 | SAR3 (SUPPRESSOR OF AUXIN RESISTANCE 3); porin | chr1:30324219-30328489 FORWARDNucleoporin2 protein|OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed",-1.3587781,null,33.2,"development.late embryogenesis abundant","Os01g0225600","Transcript","weakly similar to ( 183) AT1G01470 | Symbols: LEA14, LSR3 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | chr1:172295-172826 REVERSEmoderately similar to ( 206) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",1.7882758,null,26.12,"misc.peroxidases","Os10g0109300","Transcript","moderately similar to ( 307) AT5G06720 | Symbols: | peroxidase, putative | chr5:2077567-2078857 REVERSEmoderately similar to ( 268) PERX_TOBAC Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",3.37045,{"$nulls":8},"Os06g0725200","GDSL-motif lipase",3.2110882,2.7790508,2.6863937,3.8093672,3.0442028,4.3801765]
[null,3.5,"minor CHO metabolism.others","Os04g0447700","Transcript","moderately similar to ( 328) AT1G59960 | Symbols: | aldo/keto reductase, putative | chr1:22071410-22073067 REVERSEmoderately similar to ( 347) NADO2_ORYSA Probable NAD(P)H-dependent oxidoreductase 2 (EC 1.-.-.-) - Oryza sativa (Rice) Aldo_ket_red ARA1 dkgA dkgB Tas COG4989 protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",-2.855882,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958,null,"29.3.1","protein.targeting.nucleus","Os04g0691600","Transcript","nearly identical (1209) AT2G16950 | Symbols: TRN1, ATTRN1 | TRN1 (TRANSPORTIN 1); protein transporter | chr2:7353939-7360637 FORWARD KAP95 protein|transportin-2, putative, expressed",3.0316124,null,33.2,"development.late embryogenesis abundant","Os03g0843300","Transcript","moderately similar to ( 408) AT2G44060 | Symbols: | late embryogenesis abundant family protein / LEA family protein | chr2:18226922-18227988 FORWARDvery weakly similar to (85.1) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",-0.989985,null,26.12,"misc.peroxidases","Os07g0156200","Transcript","weakly similar to ( 194) AT4G36430 | Symbols: | peroxidase, putative | chr4:17204648-17205917 REVERSEweakly similar to ( 191) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",4.1536126,{"$nulls":8},"Os06g0641500","cytochrome P450",{"$nulls":3},3.8553114,1.5983276,3.853249]
[null,3.5,"minor CHO metabolism.others","Os01g0101200","Transcript","moderately similar to ( 272) AT5G53850 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr5:21861617-21864817 REVERSE COG4229 protein|enolase-phosphatase E1, putative, expressed",3.193882,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0198900","Transcript","moderately similar to ( 349) AT1G19340 | Symbols: | methyltransferase MT-A70 family protein | chr1:6684798-6686798 FORWARD MT-A70 protein|MT-A70 domain containing protein, expressed",1.2118767,null,"29.3.1","protein.targeting.nucleus","Os01g0253300","Transcript","highly similar to ( 776) AT3G06720 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter | chr3:2120559-2123555 FORWARDhighly similar to ( 949) IMA1A_ORYSA Importin alpha-1a subunit - Oryza sativa (Rice) SRP1 ARM IBB protein|importin subunit alpha, putative, expressed",-1.0444578,null,33.2,"development.late embryogenesis abundant","Os01g0574800","Transcript","Hin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.6755605,null,26.12,"misc.peroxidases","Os01g0326300","Transcript","moderately similar to ( 233) AT5G64120 | Symbols: | peroxidase, putative | chr5:25659551-25660946 REVERSEmoderately similar to ( 225) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",-1.8977785,{"$nulls":8},"Os09g0491100","Gluco-, Galacto- and mannosidases",3.2062006,1.8038883,2.6905851,3.8962102,4.536384,3.9979386]
[null,"3.8.2","minor CHO metabolism.galactose.alpha-galactosidases","Os10g0493600","Transcript","highly similar to ( 515) AT5G08370 | Symbols: AtAGAL2 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:2691116-2693441 REVERSEhighly similar to ( 714) AGAL_ORYSA Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) Melibiase protein|alpha-galactosidase precursor, putative, expressed",1.5362161,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0270000","Transcript","weakly similar to ( 132) AT2G45430 | Symbols: | DNA-binding protein-related | chr2:18727848-18728801 FORWARDDUF296 protein|DNA binding protein, putative, expressed",-1.075112,null,"29.3.1","protein.targeting.nucleus","Os02g0497700","Transcript","weakly similar to ( 121) AT3G25150 | Symbols: | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | chr3:9157161-9159362 REVERSE NTF2 NTF2 protein|RNA-binding protein-like, putative, expressed",-1.4602934,null,33.3,"development.squamosa promoter binding like (SPL)","Os06g0659100","Transcript","weakly similar to ( 151) AT1G02065 | Symbols: SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding | chr1:365625-367149 FORWARDweakly similar to ( 131) LG1_MAIZE LIGULELESS1 protein - Zea mays (Maize)SBP protein|OsSPL10 - SBP-box gene family member, expressed",-1.209332,null,26.12,"misc.peroxidases","Os06g0681600","Transcript","moderately similar to ( 351) AT1G05260 | Symbols: RCI3, RCI3A | RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase | chr1:1529827-1531271 FORWARDmoderately similar to ( 308) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",1.6549255,{"$nulls":8},"Os08g0106000","cytochrome P450",{"$nulls":3},3.938818,6.1343026,5.3851705]
[null,"3.8.2","minor CHO metabolism.galactose.alpha-galactosidases","Os07g0679300","Transcript","highly similar to ( 630) AT3G56310 | Symbols: | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative | chr3:20882886-20885745 FORWARDmoderately similar to ( 470) AGAL_ORYSA Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) Melibiase protein|alpha-galactosidase precursor, putative, expressed",1.3046592,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0278000","Transcript","moderately similar to ( 323) AT2G13690 | Symbols: | PRLI-interacting factor, putative | chr2:5706704-5708895 REVERSE protein|H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed",1.0838779,null,"29.3.1","protein.targeting.nucleus","Os03g0214200","Transcript","weakly similar to ( 139) AT1G13740 | Symbols: AFP2 | AFP2 (ABI FIVE BINDING PROTEIN 2) | chr1:4713969-4715158 FORWARDDUF1675 protein|protein of unknown function DUF1675 domain containing protein, expressed",1.0746373,null,33.3,"development.squamosa promoter binding like (SPL)","Os06g0703500","Transcript","weakly similar to ( 169) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEweakly similar to ( 113) SBP1_ANTMA Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL12 - SBP-box gene family member, expressed",2.0117123,null,26.12,"misc.peroxidases","Os01g0962700","Transcript","moderately similar to ( 364) AT1G71695 | Symbols: | peroxidase 12 (PER12) (P12) (PRXR6) | chr1:26964359-26966557 FORWARDmoderately similar to ( 209) PER2_ORYSA Peroxidase 2 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",0.9525461,{"$nulls":8},"Os07g0157600","Peroxidases",5.562717,5.637271,4.482899,3.9627109,6.799121,6.1356373]
[null,3.99,"minor CHO metabolism.misc","Os04g0490800","Transcript","highly similar to ( 541) AT5G36790 | Symbols: | phosphoglycolate phosphatase, putative | chr5:14481229-14483730 REVERSE NagD PRK10444 protein|4-nitrophenylphosphatase, putative, expressed",2.6197917,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0528000","Transcript","weakly similar to ( 106) AT3G49410 | Symbols: | unknown protein | chr3:18325015-18328858 FORWARD protein|expressed protein",-0.9678057,null,"29.3.1","protein.targeting.nucleus","Os09g0266000","Transcript","moderately similar to ( 202) AT1G71480 | Symbols: | nuclear transport factor 2 (NTF2) family protein | chr1:26932079-26933086 FORWARD protein|nuclear transport factor, putative, expressed",1.5426136,null,33.3,"development.squamosa promoter binding like (SPL)","Os11g0496600","Transcript","weakly similar to ( 135) AT5G50570 | Symbols: | squamosa promoter-binding protein, putative | chr5:20582555-20583791 REVERSEweakly similar to ( 112) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL19 - SBP-box gene family member, expressed",1.261798,null,26.12,"misc.peroxidases","Os02g0236800","Transcript","moderately similar to ( 249) AT5G58390 | Symbols: | peroxidase, putative | chr5:23599755-23601244 REVERSEmoderately similar to ( 263) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",3.900514,{"$nulls":8},"Os10g0529300","Glutathione S transferases",{"$nulls":3},3.9984984,4.7697916,7.4355197]
[{"$nulls":8},"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os09g0542000","Transcript","weakly similar to ( 186) AT1G76010 | Symbols: | nucleic acid binding | chr1:28528505-28530488 REVERSE Alba protein|protein of unknown function domain containing protein, expressed",-1.0918126,null,"29.3.2","protein.targeting.mitochondria","Os05g0111200","Transcript","weakly similar to ( 171) AT2G28900 | Symbols: OEP16, ATOEP16-L, ATOEP16-1 | ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1); P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr2:12414423-12415459 REVERSETim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",2.6894696,null,33.3,"development.squamosa promoter binding like (SPL)","Os02g0174100","Transcript","weakly similar to ( 134) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEvery weakly similar to (95.5) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL4 - SBP-box gene family member, expressed",1.9949021,null,26.12,"misc.peroxidases","Os12g0530100","Transcript","moderately similar to ( 248) AT2G39040 | Symbols: | peroxidase, putative | chr2:16299463-16301173 REVERSEmoderately similar to ( 220) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",3.463534,{"$nulls":8},"Os01g0875500","Gluco-, Galacto- and mannosidases.beta-Galactosidase",2.5692945,6.185822,5.867896,4.2265897,2.0266137,3.4327247]
[null,15,"metal handling","Os01g0916400","Transcript","highly similar to ( 770) AT4G14030 | Symbols: SBP1 | SBP1 (selenium-binding protein 1); selenium binding | chr4:8098121-8100165 REVERSE SBP56 protein|selenium-binding protein, putative, expressed",1.052749,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0735300","Transcript","weakly similar to ( 182) AT3G07030 | Symbols: | nucleic acid binding | chr3:2223001-2225254 REVERSE Alba protein|nucleic acid binding protein, putative, expressed",-1.0198506,null,"29.3.2","protein.targeting.mitochondria","Os04g0581300","Transcript","protein|mitochondrial import inner membrane translocase subunit Tim, putative, expressed",-1.0124408,null,33.99,"development.unspecified","Os03g0309800","Transcript","highly similar to ( 618) AT3G06430 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) | chr3:1956658-1958240 REVERSEweakly similar to ( 123) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR2, putative, expressed",1.8085753,null,26.12,"misc.peroxidases","Os07g0157600","Transcript","weakly similar to ( 162) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 157) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",5.6324897,{"$nulls":8},"Os04g0513900","Gluco-, Galacto- and mannosidases",3.1083503,1.7426877,2.4265957,4.2812767,2.3737926,3.3714685]
[null,15,"metal handling","Os05g0150733","Transcript","very weakly similar to (94.7) AT5G27690 | Symbols: | heavy-metal-associated domain-containing protein | chr5:9803796-9805036 FORWARD protein|pro-resilin precursor, putative, expressed",-1.1964893,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0544400","Transcript","moderately similar to ( 404) AT1G02150 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:408779-410433 FORWARD protein|PPR repeat domain containing protein, putative, expressed",2.26373,null,"29.3.2","protein.targeting.mitochondria","Os03g0194500","Transcript","weakly similar to ( 179) AT5G55510 | Symbols: | P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr5:22486525-22487916 REVERSE Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.2311996,null,33.99,"development.unspecified","Os01g0881300","Transcript","moderately similar to ( 240) AT1G21460 | Symbols: | nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE MtN3_slv protein|nodulin MtN3 family protein, putative, expressed",2.1036482,null,26.12,"misc.peroxidases","Os06g0522300","Transcript","moderately similar to ( 243) AT3G50990 | Symbols: | electron carrier/ heme binding / peroxidase | chr3:18943155-18944605 FORWARDmoderately similar to ( 246) PERX_NICSY Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",-2.3303158,{"$nulls":8},"Os03g0775000","O-methyl transferases",{"$nulls":3},4.3330994,2.464881,3.55582]
[null,15.2,"metal handling.binding, chelation and storage","Os08g0405700","Transcript","very weakly similar to (94.7) AT2G28660 | Symbols: | copper-binding family protein | chr2:12295419-12296944 FORWARD protein|heavy metal-associated domain containing protein, expressed",2.0857656,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0953801","Transcript","weakly similar to ( 112) AT5G49700 | Symbols: | DNA-binding protein-related | chr5:20192599-20193429 FORWARDDUF296 protein|DNA binding protein, putative, expressed",4.34181,null,"29.3.2","protein.targeting.mitochondria","Os03g0114900","Transcript","weakly similar to ( 166) AT1G17530 | Symbols: ATTIM23-1 | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr1:6027723-6028286 FORWARD Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.1456639,null,33.99,"development.unspecified","Os04g0677700","Transcript","highly similar to ( 595) AT5G23430 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:7894073-7899862 REVERSEweakly similar to ( 110) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii WD40 COG2319 protein|katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed",2.2294672,null,26.12,"misc.peroxidases","Os01g0378100","Transcript","moderately similar to ( 265) AT5G15180 | Symbols: | peroxidase, putative | chr5:4930561-4932211 FORWARDmoderately similar to ( 255) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",2.9726746,{"$nulls":8},"Os06g0156600","GDSL-motif lipase",{"$nulls":3},4.3453603,4.0527463,5.961312]
[null,15.2,"metal handling.binding, chelation and storage","Os04g0390100","Transcript","weakly similar to ( 160) AT5G50740 | Symbols: | metal ion binding | chr5:20635983-20637970 REVERSE protein|heavy metal-associated domain containing protein, expressed",1.7338842,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os08g0451400","Transcript","highly similar to ( 781) AT3G43240 | Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr3:15210032-15214440 REVERSE protein|ARID/BRIGHT DNA-binding domain containing protein, expressed",-1.0829905,null,"29.3.2","protein.targeting.mitochondria","Os03g0296300","Transcript","weakly similar to ( 167) AT3G10110 | Symbols: MEE67 | MEE67 (maternal effect embryo arrest 67); P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr3:3116225-3117378 FORWARD Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.096938,null,33.99,"development.unspecified","Os10g0181200","Transcript","highly similar to ( 808) AT4G34830 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2745 (EMBRYO DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 19818 Blast hits to 5849 proteins in 171 species: Archae - 3; Bacteria - 16; Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0; Other Eukaryotes - 1100 (source: NCBI BLink). | chr4:16599976-16605994 REVERSEweakly similar to ( 126) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.3580487,null,26.12,"misc.peroxidases","Os01g0293900","Transcript","weakly similar to ( 198) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 193) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",4.1536126,{"$nulls":8},"Os04g0305700","UDP glucosyl and glucoronyl transferases",{"$nulls":3},4.4103,5.216822,7.625608]
[null,15.2,"metal handling.binding, chelation and storage","Os11g0106700","Transcript","weakly similar to ( 199) AT2G40300 | Symbols: ATFER4 | ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | chr2:16831501-16833214 REVERSEmoderately similar to ( 252) FRI1_MAIZE Ferritin-1, chloroplast precursor (EC 1.16.3.1) (ZmFer1) - Zea mays (Maize) Euk_Ferritin Ferritin Ferritin Nonheme_Ferritin protein|ferritin-1, chloroplast precursor, putative, expressed",1.9319158,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os12g0579000","Transcript","moderately similar to ( 262) AT5G61150 | Symbols: VIP4 | VIP4 (VERNALIZATION INDEPENDENCE 4); protein binding | chr5:24603846-24607528 REVERSE Leo1 protein|VIP4, putative, expressed",-0.9946081,null,"29.3.3","protein.targeting.chloroplast","Os01g0151200","Transcript","highly similar to ( 519) AT2G28800 | Symbols: ALB3, ABL3 | ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr2:12357133-12359158 REVERSEmoderately similar to ( 498) PPF1_PEA Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) 60KD_IMP PRK01318 YidC PRK00145 PRK01315 PRK02944 PRK01001 PRK01622 PRK03449 PRK02654 protein|inner membrane protein, putative, expressed",1.532559,null,33.99,"development.unspecified","Os06g0729300","Transcript","nearly identical (1368) AT1G48410 | Symbols: AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | chr1:17886285-17891892 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|PAZ domain containing protein, putative, expressed",2.4585974,null,26.12,"misc.peroxidases","Os01g0294700","Transcript","weakly similar to ( 182) AT5G14130 | Symbols: | peroxidase, putative | chr5:4558862-4560028 REVERSEweakly similar to ( 174) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",7.996718,{"$nulls":8},"Os07g0586200","GDSL-motif lipase",4.066825,4.1376586,5.3633637,4.416905,3.3971663,4.6559176]
[null,15.2,"metal handling.binding, chelation and storage","Os11g0704500","Transcript","protein|metallothionein, putative, expressed",-1.3823608,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0472000","Transcript","moderately similar to ( 231) AT1G53670 | Symbols: MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase | chr1:20036687-20038074 FORWARD PRK00222 COG0229 SelR PRK05550 PRK05508 protein|peptide methionine sulfoxide reductase msrB, putative, expressed",1.7438723,null,"29.3.3","protein.targeting.chloroplast","Os10g0492101","Transcript","highly similar to ( 695) AT1G06950 | Symbols: ATTIC110, TIC110 | TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110) | chr1:2130303-2135563 REVERSE protein|ATTIC110/TIC110, putative, expressed",-1.2841135,null,33.99,"development.unspecified","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623,{"$nulls":15},"Os04g0359100","oxidases - copper, flavone etc.",4.2402844,6.440362,6.9739504,4.4635563,5.1943736,5.249121]
[null,15.2,"metal handling.binding, chelation and storage","Os03g0120400","Transcript","moderately similar to ( 203) AT2G18196 | Symbols: | metal ion binding | chr2:7920793-7922268 REVERSE protein|heavy metal-associated domain containing protein, expressed",-1.2539253,null,"27.3.68","RNA.regulation of transcription.PWWP domain protein","Os03g0358000","Transcript","moderately similar to ( 232) AT3G63070 | Symbols: | PWWP domain-containing protein | chr3:23302667-23309575 FORWARDRPR protein|PWWP domain containing protein, expressed",-1.0836544,null,"29.3.3","protein.targeting.chloroplast","Os08g0254500","Transcript","moderately similar to ( 453) AT2G18710 | Symbols: SCY1 | SCY1 (SecY Homolog 1); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr2:8112231-8114452 REVERSEhighly similar to ( 511) SECY_ORYSA Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Oryza sativa (Rice)secY SecY SecY secY secY protein|preprotein translocase subunit secY, putative, expressed",2.6227434,null,33.99,"development.unspecified","Os01g0864500","Transcript","very weakly similar to (94.4) AT2G35980 | Symbols: YLS9, NHL10, ATNHL10 | YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) | chr2:15110635-15111318 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",-1.860396,null,26.13,"misc.acid and other phosphatases","Os03g0238600","Transcript","moderately similar to ( 397) AT1G14700 | Symbols: PAP3, ATPAP3 | PAP3 (PURPLE ACID PHOSPHATASE 3); acid phosphatase/ protein serine/threonine phosphatase | chr1:5058680-5060988 FORWARD protein|Ser/Thr protein phosphatase family protein, putative, expressed",1.3971219,{"$nulls":8},"Os06g0148200","GDSL-motif lipase",{"$nulls":3},4.5336585,1.5134311,3.0374355]
[null,15.2,"metal handling.binding, chelation and storage","Os02g0510600","Transcript","weakly similar to ( 108) AT5G50740 | Symbols: | metal ion binding | chr5:20635983-20637970 REVERSE protein|heavy metal-associated domain containing protein, expressed",2.0547333,null,"27.3.69","RNA.regulation of transcription.SET-domain transcriptional regulator family","Os12g0236900","Transcript","highly similar to ( 659) AT5G14260 | Symbols: | SET domain-containing protein | chr5:4601139-4603873 FORWARD Rubis-subs-bind protein|SET domain-containing protein, putative, expressed",1.5258604,null,"29.3.3","protein.targeting.chloroplast","Os04g0118100","Transcript","moderately similar to ( 406) AT1G08980 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | chr1:2884455-2886430 FORWARD PRK08310 GatA Amidase gatA PRK09201 PRK07056 PRK07488 PRK08186 PRK06102 PRK05962 PRK07139 PRK06169 PRK06170 PRK12470 PRK08137 PRK07235 PRK07869 PRK07486 PRK07487 PRK06061 PRK07042 PRK06707 protein|amidase family protein, putative, expressed",1.3241987,null,33.99,"development.unspecified","Os06g0254700","Transcript","moderately similar to ( 223) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",1.5088993,null,26.13,"misc.acid and other phosphatases","Os05g0189900","Transcript","moderately similar to ( 209) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEweakly similar to ( 187) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",7.353548,{"$nulls":8},"Os10g0530500","Glutathione S transferases",{"$nulls":3},4.571737,4.6242986,5.9129033]
[null,15.2,"metal handling.binding, chelation and storage","Os10g0209700","Transcript","weakly similar to ( 126) AT5G50740 | Symbols: | metal ion binding | chr5:20635983-20637970 REVERSE protein|heavy metal-associated domain containing protein, expressed",-1.8288916,null,"27.3.73","RNA.regulation of transcription.Zn-finger(CCHC)","Os02g0523500","Transcript","nearly identical (1254) AT5G07350 | Symbols: | tudor domain-containing protein / nuclease family protein | chr5:2319790-2324892 REVERSE TUDOR SNc SNc protein|TUDOR protein with multiple SNc domains, putative, expressed",-0.9515063,null,"29.3.3","protein.targeting.chloroplast","Os04g0117900","Transcript","moderately similar to ( 384) AT1G08980 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | chr1:2884455-2886430 FORWARD PRK08310 GatA Amidase PRK07056 PRK09201 PRK07488 gatA PRK08186 PRK05962 PRK06102 PRK06169 PRK06170 PRK12470 PRK07869 PRK07235 PRK07139 PRK07487 PRK08137 PRK07486 PRK06061 PRK07042 PRK06707 protein|amidase family protein, putative, expressed",-1.5737028,null,33.99,"development.unspecified","Os06g0131700","Transcript","moderately similar to ( 269) AT2G46770 | Symbols: NST1, EMB2301, ANAC043 | EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | chr2:19220917-19222822 REVERSEmoderately similar to ( 224) NAC76_ORYSA NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",4.2799582,null,26.13,"misc.acid and other phosphatases","Os08g0531000","Transcript","highly similar to ( 837) AT5G50400 | Symbols: ATPAP27, PAP27 | PAP27 (PURPLE ACID PHOSPHATASE 27); acid phosphatase/ protein serine/threonine phosphatase | chr5:20523575-20526231 REVERSEhighly similar to ( 675) NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) protein|nucleotide pyrophosphatase/phosphodiesterase, putative, expressed",4.5972238,{"$nulls":8},"Os08g0531000","acid and other phosphatases",3.0203657,2.8346243,2.03233,4.6418796,4.671396,4.478396]
[null,15.2,"metal handling.binding, chelation and storage","Os12g0106000","Transcript","moderately similar to ( 276) AT2G40300 | Symbols: ATFER4 | ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | chr2:16831501-16833214 REVERSEmoderately similar to ( 335) FRI1_MAIZE Ferritin-1, chloroplast precursor (EC 1.16.3.1) (ZmFer1) - Zea mays (Maize) Euk_Ferritin Ferritin Ferritin Nonheme_Ferritin Ftn protein|ferritin-1, chloroplast precursor, putative, expressed",1.6871611,null,"27.3.80","RNA.regulation of transcription.zf-HD","Os08g0438400","Transcript","very weakly similar to (85.9) AT3G28920 | Symbols: AtHB34 | AtHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor | chr3:10940598-10941536 REVERSEZF-HD_dimer protein|ZF-HD protein dimerisation region containing protein, expressed",-1.6525875,null,"29.3.3","protein.targeting.chloroplast","Os03g0131900","Transcript","moderately similar to ( 280) AT2G47450 | Symbols: CAO, CPSRP43 | CAO (CHAOS); chromatin binding | chr2:19472781-19473902 FORWARDhighly similar to ( 614) SR43C_ORYSA Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice)ANK protein|signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed",4.6295643,null,33.99,"development.unspecified","Os11g0705200","Transcript","moderately similar to ( 419) AT2G37650 | Symbols: | scarecrow-like transcription factor 9 (SCL9) | chr2:15792623-15794779 FORWARDweakly similar to ( 187) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|GRAS family transcription factor domain containing protein, expressed",-1.414639,null,26.13,"misc.acid and other phosphatases","Os05g0191500","Transcript","very weakly similar to (93.6) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEAcid_phosphat_B protein|acid phosphatase, putative, expressed",3.1318233,{"$nulls":8},"Os07g0510500","UDP glucosyl and glucoronyl transferases",{"$nulls":3},4.6543255,4.9898825,8.0195055]
[null,15.3,"metal handling.regulation","Os10g0419400","Transcript","moderately similar to ( 311) AT4G14710 | Symbols: ATARD2 | acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | chr4:8424943-8426360 REVERSEmoderately similar to ( 407) ARD1_ORYSA 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 (EC 1.13.-.-) (Aci-reductone dioxygenase 1) (Submergence-induced protein 2) - Oryza sativa (Rice) ARD COG1791 protein|1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed",-1.2983583,null,"27.3.81","RNA.regulation of transcription.S1FA","Os04g0408700","Transcript","weakly similar to ( 102) S1FA2_ORYSA DNA-binding protein S1FA2 - Oryza sativa (Rice)S1FA protein|DNA-binding protein S1FA, putative, expressed",0.9976403,null,"29.3.3","protein.targeting.chloroplast","Os10g0492300","Transcript","moderately similar to ( 278) AT1G06950 | Symbols: ATTIC110, TIC110 | TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110) | chr1:2130303-2135563 REVERSE protein|IAP100, putative, expressed",2.230601,null,33.99,"development.unspecified","Os02g0170000","Transcript","highly similar to ( 699) AT2G35130 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:14807589-14810164 REVERSEweakly similar to ( 168) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide containing protein, putative, expressed",2.769395,null,26.13,"misc.acid and other phosphatases","Os12g0637400","Transcript","very weakly similar to (85.9) AT2G16430 | Symbols: PAP10, ATPAP10 | PAP10 (PURPLE ACID PHOSPHATASE 10); acid phosphatase/ protein serine/threonine phosphatase | chr2:7120502-7122772 REVERSEvery weakly similar to (84.7) PPAF_SOYBN Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) protein|purple acid phosphatase precursor, putative, expressed",2.5791647,{"$nulls":8},"Os10g0317900","cytochrome P450",3.3789167,6.0053873,5.7057314,5.1315103,6.261717,7.7105246]
[{"$nulls":8},"27.3.82","RNA.regulation of transcription.plant TF (pbf2)","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958,null,"29.3.3","protein.targeting.chloroplast","Os10g0567400","Transcript","highly similar to ( 674) AT1G44446 | Symbols: CH1, ATCAO, CAO | CH1 (CHLORINA 1); chlorophyllide a oxygenase | chr1:16849132-16851152 REVERSEhighly similar to ( 960) CAO_ORYSA Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice)Rieske_RO_Alpha_Cao HcaE Rieske_RO_Alpha_PhDO_like Rieske_RO_Alpha_N Rieske_RO_Alpha_VanA_DdmC Rieske_RO_Alpha_Tic55 PaO Rieske_RO_Alpha_PaO protein|chlorophyllide a oxygenase, chloroplast precursor, putative, expressed",2.1365983,null,33.99,"development.unspecified","Os03g0162900","Transcript","highly similar to ( 736) AT3G23020 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:8177215-8179743 REVERSEweakly similar to ( 159) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",4.1304536,null,26.13,"misc.acid and other phosphatases","Os01g0191200","Transcript","weakly similar to ( 157) AT4G29260 | Symbols: | acid phosphatase class B family protein | chr4:14422310-14423409 REVERSEweakly similar to ( 169) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",3.958133,{"$nulls":8},"Os05g0500000","UDP glucosyl and glucoronyl transferases",{"$nulls":3},5.236508,5.2995753,5.307017]
[null,16.1,"secondary metabolism.isoprenoids","Os12g0181300","Transcript","moderately similar to ( 287) AT3G11950 | Symbols: | prenyltransferase/ zinc ion binding | chr3:3783273-3785098 REVERSE protein|TRAF-type zinc finger family protein, expressed",1.1422411,null,"27.3.99","RNA.regulation of transcription.unclassified","Os11g0246100","Transcript","very weakly similar to (80.1) AT1G21150 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr1:7406406-7407578 REVERSEmTERF protein|mTERF family protein, expressed",-1.2360724,null,"29.3.4.2","protein.targeting.secretory pathway.golgi","Os11g0433500","Transcript","nearly identical (1067) AT1G05520 | Symbols: | transport protein, putative | chr1:1631126-1635703 REVERSE SEC23 Sec23-like Sec23_trunk trunk_domain COG5028 Sec23_helical Sec23_BS protein|protein transport protein, putative, expressed",-1.0646049,null,33.99,"development.unspecified","Os03g0201400","Transcript","moderately similar to ( 466) AT2G16880 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7312262-7314493 REVERSEmoderately similar to ( 256) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.2293673,null,26.13,"misc.acid and other phosphatases","Os01g0941800","Transcript","moderately similar to ( 457) AT3G10150 | Symbols: ATPAP16, PAP16 | PAP16 (PURPLE ACID PHOSPHATASE 16); acid phosphatase/ protein serine/threonine phosphatase | chr3:3137502-3139056 REVERSE protein|Ser/Thr protein phosphatase family protein, putative, expressed",2.6106322,{"$nulls":8},"Os03g0368900","Peroxidases",2.5956354,4.851833,4.5922456,5.392248,7.4287395,8.721655]
[null,"16.1.1","secondary metabolism.isoprenoids.non-mevalonate pathway","Os02g0744900","Transcript","highly similar to ( 637) AT1G74470 | Symbols: | geranylgeranyl reductase | chr1:27991248-27992845 FORWARDFixC UbiH protein|FAD binding domain containing protein, expressed",4.0255523,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0118700","Transcript","weakly similar to ( 191) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE protein|aspartic protease, putative, expressed",7.5530396,null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os03g0842700","Transcript","moderately similar to ( 214) AT3G19770 | Symbols: ATVPS9A, VPS9A | VPS9A; Rho guanyl-nucleotide exchange factor | chr3:6867742-6869114 FORWARD VPS9 VPS9 protein|vacuolar sorting protein, putative, expressed",1.1670836,null,33.99,"development.unspecified","Os02g0128800","Transcript","moderately similar to ( 452) AT3G58040 | Symbols: SINAT2 | SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:21489612-21491085 FORWARDweakly similar to ( 154) SINAL_DROME Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) Sina Sina protein|seven in absentia protein family domain containing protein, expressed",1.5247623,null,26.13,"misc.acid and other phosphatases","Os05g0190500","Transcript","moderately similar to ( 219) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEmoderately similar to ( 201) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",6.838286,{"$nulls":8},"Os05g0189900","acid and other phosphatases",6.250766,8.249512,8.536517,5.4533706,8.409834,8.197439]
[null,"16.1.1.1","secondary metabolism.isoprenoids.non-mevalonate pathway.DXS","Os05g0408900","Transcript","nearly identical (1150) AT4G15560 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARDnearly identical (1393) DXS_ORYSA Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice) PRK05444 Dxs PRK12571 PRK12315 TPP_DXS COG3958 Transket_pyr PRK05899 Transketolase_C AcoB protein|transketolase, putative, expressed",5.5856977,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0534800","Transcript","moderately similar to ( 201) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.4917682,null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os03g0297700","Transcript","moderately similar to ( 234) AT1G62350 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT3G46870.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:23056653-23057935 FORWARD protein|PPR repeat domain containing protein, putative, expressed",-1.0641394,null,33.99,"development.unspecified","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613,null,26.13,"misc.acid and other phosphatases","Os05g0191700","Transcript","weakly similar to ( 148) AT4G29260 | Symbols: | acid phosphatase class B family protein | chr4:14422310-14423409 REVERSEweakly similar to ( 144) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",2.885413,{"$nulls":8},"Os06g0102100","cytochrome P450",{"$nulls":3},6.033545,5.4429345,7.712037]
[null,"16.1.1.10","secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase","Os12g0271700","Transcript","moderately similar to ( 474) AT1G17050 | Symbols: SPS2 | SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase | chr1:5829289-5831215 FORWARDweakly similar to ( 119) GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis IspA Trans_IPPS_HT polyprenyl_synt PRK10888 Trans_IPPS Isoprenoid_Biosyn_C1 PRK10581 protein|polyprenyl synthetase, putative, expressed",2.7686508,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0624900","Transcript","moderately similar to ( 226) AT1G21000 | Symbols: | zinc-binding family protein | chr1:7338013-7339088 FORWARDPLATZ protein|zinc-binding protein, putative, expressed",-1.2052364,null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os11g0116550","Transcript","highly similar to ( 971) AT3G52850 | Symbols: VSR1, BP-80, ATELP, VSR-1, BP80, BP80B, ATELP1, ATVSR1 | VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1); amino-terminal vacuolar sorting propeptide binding | chr3:19587999-19591690 FORWARDhighly similar to ( 906) VSR1_PEA Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea)PA_VSR PA_C_RZF_like protein|vacuolar-sorting receptor precursor, putative, expressed",-2.1221395,null,33.99,"development.unspecified","Os06g0572400","Transcript","moderately similar to ( 228) AT2G19580 | Symbols: TET2 | TET2 (TETRASPANIN2) | chr2:8472393-8475021 REVERSE protein|tetraspanin family protein, putative, expressed",1.5327787,null,26.13,"misc.acid and other phosphatases","Os07g0681200","Transcript","moderately similar to ( 203) AT2G38600 | Symbols: | acid phosphatase class B family protein | chr2:16145907-16146857 FORWARDweakly similar to ( 112) VSPB_SOYBN Stem 31 kDa glycoprotein precursor (Vegetative storage protein B) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",3.1730137,{"$nulls":8},"Os06g0289900","UDP glucosyl and glucoronyl transferases",{"$nulls":3},6.71208,7.142248,9.773715]
[null,"16.1.1.10","secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase","Os05g0582300","Transcript","moderately similar to ( 423) AT1G78510 | Symbols: SPS1 | SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase | chr1:29535410-29537042 REVERSEweakly similar to ( 109) GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis IspA Trans_IPPS_HT polyprenyl_synt PRK10888 Trans_IPPS Isoprenoid_Biosyn_C1 PRK10581 protein|polyprenyl synthetase, putative, expressed",1.2358862,null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0189300","Transcript","moderately similar to ( 397) AT1G77060 | Symbols: | mutase family protein | chr1:28951804-28953449 REVERSEmoderately similar to ( 329) CPPM_DIACA Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) PrpB prpB protein|carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed",3.295161,null,"29.3.4.4","protein.targeting.secretory pathway.plasma membrane","Os01g0139000","Transcript","weakly similar to ( 184) AT3G18260 | Symbols: | reticulon family protein (RTNLB9) | chr3:6260328-6261504 REVERSE Reticulon protein|reticulon domain containing protein, putative, expressed",3.424846,null,33.99,"development.unspecified","Os09g0536700","Transcript","moderately similar to ( 287) AT4G34950 | Symbols: | nodulin family protein | chr4:16642544-16644759 REVERSENodulin-like protein|nodulin, putative, expressed",-1.097448,null,26.13,"misc.acid and other phosphatases","Os01g0720400","Transcript","moderately similar to ( 309) AT1G73010 | Symbols: | phosphatase | chr1:27464780-27466180 REVERSE Put_Phosphatase protein|phosphoethanolamine/phosphocholine phosphatase, putative, expressed",-1.3515873,{"$nulls":8},"Os01g0294700","Peroxidases",{"$nulls":3},7.1948223,7.7119513,9.08338]
[null,"16.1.1.10","secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase","Os02g0668100","Transcript","moderately similar to ( 256) AT4G38460 | Symbols: GGR | GGR (geranylgeranyl reductase); farnesyltranstransferase | chr4:17994849-17995974 FORWARDweakly similar to ( 170) GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis IspA Trans_IPPS_HT polyprenyl_synt Trans_IPPS PRK10581 PRK10888 protein|polyprenyl synthetase, putative, expressed",-2.4695454,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0637200","Transcript","moderately similar to ( 222) AT5G61190 | Symbols: | zinc finger protein-related | chr5:24615480-24619886 FORWARDDUF537 protein|expressed protein",0.95674485,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os06g0114200","Transcript","moderately similar to ( 287) AT5G17060 | Symbols: ATARFB1B | ATARFB1B; GTP binding | chr5:5611056-5612639 FORWARDmoderately similar to ( 211) ARF1_SOLTU ADP-ribosylation factor 1 - Solanum tuberosum (Potato) Arf1_5_like Arf_Arl Arf ARF Arl1 Arf6 Arl5_Arl8 ARLTS1 ARD1 Arl2 Arl4_Arl7 Arl3 Arl6 Arfrp1 Sar1 Arl10_like Arl9_Arfrp2_like Ras_like_GTPase COG1100 SAR Arl2l1_Arl13_like protein|ADP-ribosylation factor 1, putative, expressed",1.5095987,null,33.99,"development.unspecified","Os03g0327100","Transcript","moderately similar to ( 273) AT5G18270 | Symbols: ANAC087 | ANAC087; transcription factor | chr5:6041241-6042743 REVERSEmoderately similar to ( 223) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.2523727,{"$nulls":15},"Os05g0135500","Peroxidases",6.7180924,8.488998,8.377001,8.649934,9.598537,10.660767]
[null,"16.1.1.10","secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase","Os07g0580900","Transcript","moderately similar to ( 364) AT4G36810 | Symbols: GGPS1 | GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase | chr4:17343513-17344628 FORWARDmoderately similar to ( 374) GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Hevea brasiliensis polyprenyl_synt IspA Trans_IPPS_HT PRK10581 Trans_IPPS PRK10888 Isoprenoid_Biosyn_C1 protein|polyprenyl synthetase, putative, expressed",1.3168926,null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0197500","Transcript","moderately similar to ( 400) AT5G23570 | Symbols: SGS3, ATSGS3 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | chr5:7943621-7945874 FORWARD protein|leafbladeless1, putative, expressed",1.5788475,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os05g0461000","Transcript","moderately similar to ( 206) AT1G60970 | Symbols: | clathrin adaptor complex small chain family protein | chr1:22448008-22449387 REVERSE RET3 protein|clathrin adaptor complex small chain domain containing protein, expressed",-0.9751541,null,33.99,"development.unspecified","Os03g0211600","Transcript","highly similar to ( 509) AT3G29290 | Symbols: emb2076 | emb2076 (embryo defective 2076) | chr3:11238421-11240125 FORWARDweakly similar to ( 106) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.2526853,null,26.4,"misc.beta 1,3 glucan hydrolases","Os03g0421800","Transcript","very weakly similar to (97.8) AT1G18650 | Symbols: PDCB3 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | chr1:6419036-6420413 REVERSEX8 protein|X8 domain containing protein, expressed",2.3464868]
[null,"16.1.2","secondary metabolism.isoprenoids.mevalonate pathway","Os01g0857200","Transcript","moderately similar to ( 281) AT5G58770 | Symbols: | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | chr5:23734396-23735495 FORWARD UppS CIS_IPPS Prenyltransf PRK10240 protein|dehydrodolichyl diphosphate synthase, putative, expressed",0.99794674,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0471800","Transcript","weakly similar to ( 181) AT1G45207 | Symbols: | remorin family protein | chr1:17130703-17133548 REVERSE protein|remorin C-terminal domain containing protein, putative, expressed",3.6115944,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os02g0178400","Transcript","very weakly similar to (92.8) AT5G50460 | Symbols: | protein transport protein SEC61 gamma subunit, putative | chr5:20552168-20552509 REVERSEweakly similar to ( 101) SC61G_ORYSA Protein transport protein SEC61 subunit gamma - Oryza sativa (Rice) protein|protein transport protein SEC61 subunit gamma, putative, expressed",-1.1304274,null,33.99,"development.unspecified","Os05g0145400","Transcript","moderately similar to ( 405) AT3G24440 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) | chr3:8876207-8878171 REVERSE protein|Fibronectin type III domain containing protein, expressed",-1.1132355,null,26.4,"misc.beta 1,3 glucan hydrolases","Os06g0537700","Transcript","weakly similar to ( 108) AT3G58100 | Symbols: PDCB5 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding | chr3:21515397-21516329 REVERSEX8 protein|X8 domain containing protein, expressed",1.0249586]
[null,"16.1.3","secondary metabolism.isoprenoids.tocopherol biosynthesis","Os07g0576000","Transcript","moderately similar to ( 385) AT3G11945 | Symbols: ATHST | homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase | chr3:3780041-3782880 REVERSEubiA protein|prenyltransferase, putative, expressed",1.9480647,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0515800","Transcript","moderately similar to ( 398) AT4G38160 | Symbols: pde191 | pde191 (pigment defective 191) | chr4:17902412-17903784 FORWARD mTERF protein|mTERF domain containing protein, expressed",2.3015,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os01g0565900","Transcript","protein|protein transport protein Sec61 subunit beta, putative, expressed",-1.1313366,null,33.99,"development.unspecified","Os08g0535800","Transcript","weakly similar to ( 102) AT5G13180 | Symbols: ANAC083 | ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | chr5:4196643-4197577 FORWARDvery weakly similar to (89.0) NAC68_ORYSA NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.5443617,null,26.4,"misc.beta 1,3 glucan hydrolases","Os01g0243700","Transcript","weakly similar to ( 110) AT1G78520 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 17 (TAIR:AT2G43670.1); Has 747 Blast hits to 711 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 747; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:29537976-29538656 REVERSEvery weakly similar to (93.6) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)X8 protein|X8 domain containing protein, expressed",1.2619548]
[null,"16.1.3.3","secondary metabolism.isoprenoids.tocopherol biosynthesis.MPBQ/MSBQ methyltransferase","Os12g0615400","Transcript","moderately similar to ( 386) AT3G63410 | Symbols: APG1, VTE3, IEP37, E37 | APG1 (ALBINO OR PALE GREEN MUTANT 1); 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase/ S-adenosylmethionine-dependent methyltransferase/ methyltransferase | chr3:23415816-23417002 REVERSEmoderately similar to ( 382) IN37_SPIOL 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) UbiE Methyltransf_11 ubiE Ubie_methyltran protein|methyltransferase domain containing protein, putative, expressed",1.7629586,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0533000","Transcript","moderately similar to ( 201) AT2G03200 | Symbols: | aspartyl protease family protein | chr2:966506-967891 REVERSE Asp protein|aspartic proteinase nepenthesin precursor, putative, expressed",2.0685098,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os05g0383100","Transcript","highly similar to ( 633) AT1G56590 | Symbols: | clathrin adaptor complexes medium subunit family protein | chr1:21202250-21204697 REVERSE Adap_comp_sub protein|adaptor complexes medium subunit family domain containing protein, expressed",-0.95944196,null,33.99,"development.unspecified","Os06g0273500","Transcript","moderately similar to ( 340) AT5G15890 | Symbols: | unknown protein | chr5:5187687-5189348 REVERSEDUF231 protein|expressed protein",1.3914353,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0739700","Transcript","highly similar to ( 625) AT5G56590 | Symbols: | glycosyl hydrolase family 17 protein | chr5:22907521-22909436 FORWARDmoderately similar to ( 297) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",-1.0579394]
[null,"16.1.4","secondary metabolism.isoprenoids.carotenoids","Os07g0626800","Transcript","moderately similar to ( 405) AT3G09580 | Symbols: | amine oxidase family protein | chr3:2942614-2944047 REVERSEAmino_oxidase COG1233 HemY PRK07233 protein|amine oxidase family protein, putative, expressed",2.9829104,null,"27.3.99","RNA.regulation of transcription.unclassified","Os09g0423500","Transcript","moderately similar to ( 367) AT1G79720 | Symbols: | aspartyl protease family protein | chr1:29997259-29998951 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.8926609,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os09g0347700","Transcript","highly similar to ( 848) AT2G34250 | Symbols: | protein transport protein sec61, putative | chr2:14462635-14464572 FORWARD PRK08568 SecY SecY protein|protein transport protein Sec61 subunit alpha, putative, expressed",-0.9600374,null,33.99,"development.unspecified","Os02g0582300","Transcript","highly similar to ( 503) AT5G65560 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:26201012-26203759 REVERSEmoderately similar to ( 270) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",-1.3830237,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os02g0532900","Transcript","moderately similar to ( 423) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 235) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",2.0345922]
[null,"16.1.4.1","secondary metabolism.isoprenoids.carotenoids.phytoene synthase","Os06g0729000","Transcript","moderately similar to ( 476) AT5G17230 | Symbols: | phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | chr5:5659839-5662087 REVERSEhighly similar to ( 567) PSY_MAIZE Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Zea mays (Maize) SQS_PSY Trans_IPPS_HH ERG9 Isoprenoid_Biosyn_C1 Trans_IPPS protein|phytoene synthase, chloroplast precursor, putative, expressed",2.9180725,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os10g0504600","Transcript","moderately similar to ( 375) AT5G41140 | Symbols: | unknown protein | chr5:16468726-16472546 FORWARD protein|protein transport protein-related, putative, expressed",3.8581426,null,33.99,"development.unspecified","Os07g0548300","Transcript","moderately similar to ( 494) AT5G42310 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16915860-16918238 FORWARDweakly similar to ( 189) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",2.0732763,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os07g0539100","Transcript","moderately similar to ( 344) AT5G55180 | Symbols: | glycosyl hydrolase family 17 protein | chr5:22388834-22390561 FORWARDmoderately similar to ( 218) E13D_HORVU Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) - Hordeum vulgare (Barley)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",1.6647385]
[null,"16.1.4.5","secondary metabolism.isoprenoids.carotenoids.lycopene beta cyclase","Os02g0190600","Transcript","highly similar to ( 679) AT3G10230 | Symbols: LYC | LYC (LYCOPENE CYCLASE); lycopene beta cyclase | chr3:3164340-3165449 REVERSEhighly similar to ( 672) LCYB_CAPAN Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Capsicum annuum (Bell pepper)Lycopene_cycl FixC protein|lycopene beta cyclase, chloroplast precursor, putative, expressed",0.9676053,null,"27.3.99","RNA.regulation of transcription.unclassified","Os01g0598600","Transcript","moderately similar to ( 384) AT1G01300 | Symbols: | aspartyl protease family protein | chr1:117065-118522 FORWARD Asp protein|aspartic proteinase, putative, expressed",1.9372562,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os06g0198800","Transcript","moderately similar to ( 390) AT1G11890 | Symbols: SEC22, ATSEC22 | SEC22; transporter | chr1:4011509-4012835 FORWARD SNC1 protein|25.3 kDa vesicle transport protein, putative, expressed",-1.0240699,null,33.99,"development.unspecified","Os02g0594800","Transcript","moderately similar to ( 271) AT3G01600 | Symbols: anac044 | anac044 (Arabidopsis NAC domain containing protein 44); transcription factor | chr3:229365-231105 FORWARDNAM protein|no apical meristem protein, putative, expressed",1.3745664,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0860800","Transcript","moderately similar to ( 442) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 240) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",-1.2594973]
[null,"16.1.4.6","secondary metabolism.isoprenoids.carotenoids.carotenoid beta ring hydroxylase","Os10g0533500","Transcript","moderately similar to ( 283) AT4G25700 | Symbols: BETA-OHASE 1, B1, chy1 | BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase | chr4:13094965-13095866 REVERSE protein|fatty acid hydroxylase, putative, expressed",3.4932086,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0481000","Transcript","moderately similar to ( 369) AT1G70150 | Symbols: | zinc ion binding | chr1:26416898-26419521 FORWARD protein|zinc finger protein, putative, expressed",1.2245995,null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os03g0213100","Transcript","highly similar to ( 855) AT2G34250 | Symbols: | protein transport protein sec61, putative | chr2:14462635-14464572 FORWARD PRK08568 SecY SecY protein|protein transport protein Sec61 subunit alpha, putative, expressed",-1.5263834,null,33.99,"development.unspecified","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os07g0510200","Transcript","moderately similar to ( 426) AT2G01630 | Symbols: | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative | chr2:279564-281955 REVERSEweakly similar to ( 169) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",1.8603745]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os04g0611800","Transcript","highly similar to ( 681) AT1G79460 | Symbols: GA2, KS, ATKS | GA2 (GA REQUIRING 2); ent-kaurene synthase | chr1:29890568-29894436 FORWARDhighly similar to ( 683) KSB_CUCMA Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash)Terpene_cyclase_plant_C1 Terpene_cyclase_C1 Terpene_synth_C Terpene_synth Isoprenoid_Biosyn_C1 protein|ent-kaurene synthase, chloroplast precursor, putative, expressed",1.1875777,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0749800","Transcript","weakly similar to ( 151) AT5G07900 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr5:2520188-2521405 FORWARD mTERF protein|mTERF family protein, expressed",1.5840412,null,"29.3.5","protein.targeting.peroxisomes","Os02g0245100","Transcript","moderately similar to ( 424) AT1G29260 | Symbols: PEX7, ATPEX7 | PEX7; peroxisome matrix targeting signal-2 binding / protein binding | chr1:10224923-10225876 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9853433,null,33.99,"development.unspecified","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os04g0412300","Transcript","moderately similar to ( 438) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 253) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",-1.3519093]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os06g0483200","Transcript","moderately similar to ( 368) AT2G07050 | Symbols: CAS1 | CAS1 (cycloartenol synthase 1); cycloartenol synthase | chr2:2924629-2930295 FORWARD SQCY_1 SQCY protein|cycloartenol synthase, putative, expressed",4.0655737,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0782100","Transcript","highly similar to ( 828) AT2G34357 | Symbols: | binding | chr2:14499236-14505555 FORWARD NUC173 protein|expressed protein",-1.1639978,null,"29.3.5","protein.targeting.peroxisomes","Os08g0566900","Transcript","moderately similar to ( 254) AT4G14305 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: PMP22 (TAIR:AT4G04470.1); Has 818 Blast hits to 818 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 406; Fungi - 215; Plants - 157; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | chr4:8235335-8236582 REVERSE protein|Mpv17 / PMP22 family domain containing protein, expressed",-1.1461121,null,33.99,"development.unspecified","Os01g0208000","Transcript","moderately similar to ( 247) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.9492868,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0946600","Transcript","moderately similar to ( 285) AT4G16260 | Symbols: | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:9200180-9201441 REVERSEmoderately similar to ( 422) E13E_HORVU Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) - Hordeum vulgare (Barley)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",3.953078]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os11g0285000","Transcript","highly similar to ( 906) AT2G07050 | Symbols: CAS1 | CAS1 (cycloartenol synthase 1); cycloartenol synthase | chr2:2924629-2930295 FORWARD SQCY_1 SQCY SqhC ISOPREN_C2_like protein|cycloartenol synthase, putative, expressed",2.7927694,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0610800","Transcript","moderately similar to ( 304) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase, putative, expressed",4.0232925,{"$nulls":8},33.99,"development.unspecified","Os07g0671200","Transcript","moderately similar to ( 377) AT2G32630 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13844834-13846708 FORWARDmoderately similar to ( 220) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.2524633,null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os05g0375400","Transcript","moderately similar to ( 264) AT4G16260 | Symbols: | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:9200180-9201441 REVERSEmoderately similar to ( 435) GUB2_HORVU Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II) (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) - Hordeum vulgare (Barley)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",3.1620057]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os01g0857200","Transcript","moderately similar to ( 281) AT5G58770 | Symbols: | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | chr5:23734396-23735495 FORWARD UppS CIS_IPPS Prenyltransf PRK10240 protein|dehydrodolichyl diphosphate synthase, putative, expressed",0.99794674,null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0209500","Transcript","highly similar to ( 565) AT1G69420 | Symbols: | zinc finger (DHHC type) family protein | chr1:26093690-26096736 FORWARD COG5273 zf-DHHC protein|zinc finger family protein, putative, expressed",1.6984292,null,20.1,"stress.biotic","Os07g0417600","Transcript","weakly similar to ( 192) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 181) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin, putative, expressed",1.7079655,null,33.99,"development.unspecified","Os07g0604700","Transcript","weakly similar to ( 117) AT3G29970 | Symbols: | germination protein-related | chr3:11745299-11746481 FORWARDB12D protein|B12D protein, putative, expressed",-1.6997224]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os02g0140500","Transcript","moderately similar to ( 300) AT2G07050 | Symbols: CAS1 | CAS1 (cycloartenol synthase 1); cycloartenol synthase | chr2:2924629-2930295 FORWARD SQCY_1 protein|cycloartenol synthase, putative, expressed",-1.4686095,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0521400","Transcript","weakly similar to ( 192) AT1G67325 | Symbols: | binding / zinc ion binding | chr1:25209825-25212412 REVERSE protein|zinc finger family protein, putative, expressed",-1.0846679,null,20.1,"stress.biotic","Os09g0479600","Transcript","weakly similar to ( 132) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",2.4746897,null,33.99,"development.unspecified","Os05g0171200","Transcript","weakly similar to ( 108) AT5G62200 | Symbols: | embryo-specific protein-related | chr5:24984463-24985674 REVERSEATS3 protein|embryo-specific 3, putative, expressed",2.1845307]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os04g0611700","Transcript","highly similar to ( 553) AT1G79460 | Symbols: GA2, KS, ATKS | GA2 (GA REQUIRING 2); ent-kaurene synthase | chr1:29890568-29894436 FORWARDhighly similar to ( 569) KSB_CUCMA Ent-kaurene synthase B, chloroplast precursor (EC 4.2.3.19) (KSB) - Cucurbita maxima (Pumpkin) (Winter squash)Terpene_cyclase_plant_C1 Terpene_cyclase_C1 Terpene_synth_C Terpene_synth Isoprenoid_Biosyn_C1 protein|terpene synthase, putative, expressed",1.7045217,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0720900","Transcript","moderately similar to ( 249) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase nepenthesin-1 precursor, putative, expressed",1.9263893,null,20.1,"stress.biotic","Os05g0141300","Transcript","moderately similar to ( 271) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEvery weakly similar to (94.4) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",0.97811747,null,33.99,"development.unspecified","Os10g0421800","Transcript","nearly identical (1080) AT4G31850 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) | chr4:15403020-15406358 FORWARDmoderately similar to ( 251) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.4434547]
[null,"16.1.5","secondary metabolism.isoprenoids.terpenoids","Os02g0278700","Transcript","highly similar to ( 702) AT4G02780 | Symbols: GA1, ABC33, ATCPS1 | GA1 (GA REQUIRING 1); ent-copalyl diphosphate synthase/ magnesium ion binding | chr4:1237881-1244766 REVERSEhighly similar to ( 710) KSA_PEA Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea)Terpene_cyclase_plant_C1 Terpene_synth Terpene_synth_C protein|ent-kaurene synthase, chloroplast precursor, putative, expressed",1.4828542,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0324100","Transcript","weakly similar to ( 121) AT3G56330 | Symbols: | N2,N2-dimethylguanosine tRNA methyltransferase family protein | chr3:20890250-20891933 FORWARD protein|N-dimethylguanosine tRNA methyltransferase, putative, expressed",1.3304576,null,20.1,"stress.biotic","Os01g0248300","Transcript","weakly similar to ( 199) AT1G78780 | Symbols: | pathogenesis-related family protein | chr1:29621447-29622431 REVERSEmoderately similar to ( 332) PRPX_HORVU Pathogen-related protein - Hordeum vulgare (Barley) protein|pathogen-related protein, putative, expressed",1.8871027,null,33.99,"development.unspecified","Os08g0562200","Transcript","moderately similar to ( 229) AT3G10500 | Symbols: anac053 | anac053 (Arabidopsis NAC domain containing protein 53); transcription factor | chr3:3271718-3273887 FORWARDweakly similar to ( 160) NAC74_ORYSA NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-0.9606611]
[null,16.2,"secondary metabolism.phenylpropanoids","Os02g0606800","Transcript","moderately similar to ( 298) AT2G22570 | Symbols: ATNIC1, NIC1 | NIC1 (NICOTINAMIDASE 1); catalytic/ nicotinamidase | chr2:9590021-9590846 REVERSEcysteine_hydrolases protein|isochorismatase family protein, putative, expressed",-1.0053186,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0520700","Transcript","moderately similar to ( 290) AT5G63830 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 339 Blast hits to 334 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 84; Plants - 29; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr5:25543585-25544802 REVERSE protein|HIT zinc finger domain containing protein, expressed",-0.9866403,null,20.1,"stress.biotic","Os11g0606200","Transcript","very weakly similar to (87.0) AT1G53350 | Symbols: | ATP binding | chr1:19903899-19907515 FORWARD NB-ARC protein|Leucine Rich Repeat family protein, expressed",2.423384,null,33.99,"development.unspecified","Os03g0222600","Transcript","moderately similar to ( 253) AT2G33380 | Symbols: RD20 | RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | chr2:14144984-14146374 REVERSECaleosin protein|caleosin related protein, putative, expressed",3.23753]
[null,16.2,"secondary metabolism.phenylpropanoids","Os06g0103200","Transcript","moderately similar to ( 306) AT5G42830 | Symbols: | transferase family protein | chr5:17176384-17177906 FORWARDTransferase protein|transferase family protein, putative, expressed",-1.1100157,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0404000","Transcript","highly similar to ( 545) AT4G02990 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr4:1322158-1323783 FORWARD mTERF protein|mTERF domain containing protein, expressed",1.3906912,null,20.1,"stress.biotic","Os06g0287700","Transcript","very weakly similar to (84.3) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|NBS-LRR disease resistance protein, putative, expressed",1.927749,null,33.99,"development.unspecified","Os05g0275000","Transcript","highly similar to ( 819) AT2G18940 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8203873-8206341 REVERSEmoderately similar to ( 224) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.3727248]
[null,16.2,"secondary metabolism.phenylpropanoids","Os01g0104900","Transcript","moderately similar to ( 357) AT1G27620 | Symbols: | transferase family protein | chr1:9608444-9610432 FORWARDweakly similar to ( 123) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",2.1284437,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0488100","Transcript","weakly similar to ( 186) AT5G23290 | Symbols: PDF5 | PDF5 (PREFOLDIN 5); unfolded protein binding | chr5:7846144-7847428 FORWARD Prefoldin_alpha Prefoldin protein|prefoldin, putative, expressed",-1.0586424,null,20.1,"stress.biotic","Os12g0438300","Transcript","very weakly similar to (92.0) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.657742,null,33.99,"development.unspecified","Os12g0510900","Transcript","moderately similar to ( 293) AT1G10200 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc ion binding | chr1:3346677-3347763 REVERSEmoderately similar to ( 248) SF3_HELAN Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed",3.5731878]
[null,16.2,"secondary metabolism.phenylpropanoids","Os10g0484700","Transcript","moderately similar to ( 252) AT1G77670 | Symbols: | aminotransferase class I and II family protein | chr1:29189043-29190901 REVERSE PRK08912 COG0436 PRK07777 PRK09082 PRK07212 PRK07683 PRK07309 PRK08362 PRK05794 PRK12414 PRK07682 PRK08069 PRK07367 PRK06056 PRK09276 PRK05764 PRK06220 PRK07337 PRK07543 PRK08443 PRK06107 PRK06507 PRK05957 PRK08361 PRK08363 PRK06108 PRK07310 PRK08960 PRK07568 PRK06575 PRK06348 PRK06836 PRK08636 PRK07366 PRK08068 PRK07681 PRK06375 Aminotran_1_2 PRK09148 PRK08175 PRK07778 PRK05942 PRK09265 HisC ARO8 PRK07550 MalY PRK07324 PRK06207 PRK06290 PRK03321 PRK07865 PRK02731 PRK09147 PRK05839 PRK00950 protein|aminotransferase, classes I and II, domain containing protein, expressed",1.0706683,null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0120200","Transcript","weakly similar to ( 143) AT2G02170 | Symbols: | remorin family protein | chr2:556595-558610 REVERSERemorin_C protein|remorin family protein, putative, expressed",2.2569926,null,20.1,"stress.biotic","Os11g0701000","Transcript","weakly similar to ( 172) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 368) XIP1_ORYSA Xylanase inhibitor protein 1 precursor (Class III chitinase homolog a) (RIXI protein) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.0844676,null,33.99,"development.unspecified","Os05g0356700","Transcript","moderately similar to ( 452) AT2G40320 | Symbols: | unknown protein | chr2:16840330-16842139 FORWARDDUF231 protein|PMR5, putative, expressed",2.0183454]
[null,16.2,"secondary metabolism.phenylpropanoids","Os05g0449200","Transcript","moderately similar to ( 432) AT5G01210 | Symbols: | transferase family protein | chr5:84554-85981 FORWARDvery weakly similar to (82.0) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.9940672,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0208900","Transcript","moderately similar to ( 211) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.0023584,null,20.1,"stress.biotic","Os11g0157200","Transcript","weakly similar to ( 181) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.240785,null,33.99,"development.unspecified","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023]
[null,16.2,"secondary metabolism.phenylpropanoids","Os06g0623300","Transcript","moderately similar to ( 319) AT2G33590 | Symbols: | cinnamoyl-CoA reductase family | chr2:14224622-14226365 FORWARDweakly similar to ( 189) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG Epimerase 3Beta_HSD protein|reductase, putative, expressed",1.040073,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0208200","Transcript","very weakly similar to (87.0) AT4G30030 | Symbols: | aspartyl protease family protein | chr4:14682210-14683484 REVERSE protein|expressed protein",2.2369096,null,20.1,"stress.biotic","Os11g0214700","Transcript","protein|expressed protein",1.9574338,null,33.99,"development.unspecified","Os01g0672100","Transcript","moderately similar to ( 351) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.7783573]
[null,16.2,"secondary metabolism.phenylpropanoids","Os01g0350000","Transcript","moderately similar to ( 307) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 154) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.5405397,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0396300","Transcript","moderately similar to ( 395) AT5G45550 | Symbols: | mob1/phocein family protein | chr5:18462284-18464840 FORWARD Mob1_phocein protein|mps one binder kinase activator-like 1A, putative, expressed",0.97349644,null,20.1,"stress.biotic","Os05g0247100","Transcript","weakly similar to ( 179) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 333) XIP2_ORYSA Xylanase inhibitor protein 2 precursor (Class III chitinase homolog h) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.9267607,null,33.99,"development.unspecified","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848]
[null,"16.2.1.3","secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL","Os02g0697400","Transcript","highly similar to ( 675) AT1G65060 | Symbols: 4CL3 | 4CL3; 4-coumarate-CoA ligase | chr1:24167927-24171457 REVERSEhighly similar to ( 955) 4CL2_ORYSA 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) CaiC AMP-binding PRK08314 PRK08315 PRK08316 PRK07656 PRK07770 PRK05605 PRK06187 Acs PRK06178 PRK07684 PRK03640 PRK06710 PRK07059 PRK12583 PRK08974 PRK05677 PRK09089 PRK07786 PRK07529 PRK07470 PRK08751 PRK06839 FAA1 PRK12492 PRK08276 PRK06188 PRK06087 PRK07514 PRK08162 caiC PRK06145 EntE PRK07771 PRK09088 PRK06219 PRK04319 PRK07788 PRK07798 PRK06368 PRK06164 PRK12406 PRK08633 PRK05852 PRK06018 PRK06155 entE PRK07787 PRK09192 PRK07638 PRK07008 PRK10524 PRK07867 PRK06060 PRK00851 PRK06814 EntF PRK08279 PRK05691 PRK03429 PRK06334 PRK09274 PRK05620 PRK07768 PRK08180 PRK02530 PRK09029 PRK12316 PRK03584 PRK03582 PRK08043 PRK04813 PRK12476 PRK01291 PRK08308 PRK03613 PRK12582 PRK03914 PRK05857 PRK05850 PRK07445 PRK02167 PRK12467 PRK02239 PRK10252 PRK07769 PRK04664 PRK07824 PRK05851 protein|AMP-binding domain containing protein, expressed",4.7170224,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0212200","Transcript","moderately similar to ( 476) AT3G63140 | Symbols: CSP41A | CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | chr3:23327006-23328620 REVERSEWcaG protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",2.8568566,null,20.1,"stress.biotic","Os01g0104900","Transcript","moderately similar to ( 357) AT1G27620 | Symbols: | transferase family protein | chr1:9608444-9610432 FORWARDweakly similar to ( 123) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",2.1284437,null,33.99,"development.unspecified","Os02g0810900","Transcript","moderately similar to ( 236) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 179) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",2.6135428]
[null,"16.2.1.3","secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL","Os08g0245200","Transcript","highly similar to ( 594) AT3G21240 | Symbols: 4CL2, AT4CL2 | 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase | chr3:7454497-7457314 REVERSEhighly similar to ( 953) 4CL1_ORYSA 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Oryza sativa (Rice) CaiC AMP-binding PRK08314 PRK06187 PRK08315 PRK05605 PRK08316 PRK07656 Acs PRK07770 PRK03640 PRK06710 PRK09089 PRK06178 PRK07684 PRK08276 PRK06839 PRK07786 PRK07059 PRK12583 PRK05677 PRK06188 PRK07788 PRK06087 FAA1 PRK08974 PRK07514 PRK07529 PRK08751 PRK07470 PRK08162 PRK12492 PRK06145 PRK06219 PRK07771 caiC PRK07798 EntE PRK12406 PRK09088 PRK04319 PRK06018 PRK06164 PRK07008 PRK07638 PRK08633 PRK07787 entE PRK06368 PRK05852 PRK06155 PRK06060 PRK07867 PRK09192 PRK08279 EntF PRK00851 PRK05691 PRK09274 PRK06814 PRK02530 PRK03429 PRK06334 PRK09029 PRK07768 PRK12316 PRK10524 PRK05620 PRK05857 PRK04813 PRK12476 PRK08180 PRK05850 PRK02239 PRK03584 PRK07824 PRK03613 PRK02167 PRK01291 PRK03582 PRK12467 PRK07445 PRK10252 PRK03914 PRK07769 PRK08308 acsA PRK04664 PRK08043 protein|AMP-binding domain containing protein, expressed",1.5977544,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0504700","Transcript","weakly similar to ( 108) AT3G12630 | Symbols: | zinc finger (AN1-like) family protein | chr3:4012707-4013189 FORWARDweakly similar to ( 156) ISAP1_ORYSA Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) protein|AN1-like zinc finger domain containing protein, expressed",-1.1219383,null,20.1,"stress.biotic","Os02g0612200","Transcript","protein|expressed protein",-1.4583602,null,33.99,"development.unspecified","Os10g0465000","Transcript","moderately similar to ( 229) AT5G43920 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17673397-17675630 FORWARD WD40 protein|WD repeat-containing protein, putative, expressed",1.2224302]
[null,"16.2.1.6","secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT","Os08g0154000","Transcript","moderately similar to ( 287) AT3G62000 | Symbols: | O-methyltransferase family 3 protein | chr3:22959441-22961180 REVERSEweakly similar to ( 141) CAMT_VITVI Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCOAMT) (CCOAOMT) - Vitis vinifera (Grape) Methyltransf_3 COG4122 protein|caffeoyl-CoA O-methyltransferase, putative, expressed",1.7047142,{"$nulls":8},20.1,"stress.biotic","Os03g0709200","Transcript","weakly similar to ( 169) AT5G43470 | Symbols: RPP8, HRT, RCY1 | RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8); nucleotide binding | chr5:17463130-17466658 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",-1.0200915,null,33.99,"development.unspecified","Os04g0555000","Transcript","moderately similar to ( 259) AT4G00150 | Symbols: | scarecrow-like transcription factor 6 (SCL6) | chr4:57429-59105 REVERSEvery weakly similar to (88.6) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|scarecrow, putative, expressed",1.7134777]
[null,"16.2.1.6","secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT","Os08g0498400","Transcript","moderately similar to ( 203) AT4G34050 | Symbols: | caffeoyl-CoA 3-O-methyltransferase, putative | chr4:16310844-16311973 FORWARDmoderately similar to ( 217) CAMT_MESCR Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Mesembryanthemum crystallinum (Common ice plant) Methyltransf_3 COG4122 protein|caffeoyl-CoA O-methyltransferase, putative, expressed",3.198269,null,29.4,"protein.postranslational modification","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927,null,20.1,"stress.biotic","Os08g0102700","Transcript","weakly similar to ( 158) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.8969364,null,33.99,"development.unspecified","Os01g0803300","Transcript","moderately similar to ( 417) AT5G07050 | Symbols: | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). | chr5:2191533-2193416 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3495276]
[null,"16.2.1.10","secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD","Os09g0400400","Transcript","moderately similar to ( 320) AT4G37980 | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | ELI3-1 (ELICITOR-ACTIVATED GENE 3-1); binding / catalytic/ oxidoreductase/ zinc ion binding | chr4:17852670-17853914 FORWARDmoderately similar to ( 324) MTDH_FRAAN Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) AdhP PRK09422 Tdh AdhC Qor ADH_N tdh PRK10309 PRK10083 protein|dehydrogenase, putative, expressed",-2.5996892,null,29.4,"protein.postranslational modification","Os01g0206700","Transcript","highly similar to ( 586) AT5G45820 | Symbols: CIPK20, SnRK3.6, PKS18 | CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase/ protein serine/threonine kinase | chr5:18587081-18588400 REVERSEmoderately similar to ( 479) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Srm_Brk PTKc_Fes_like PTKc_Csk_like PTKc_Fes PTKc_Jak_rpt2 PTKc_Fer PTKc_Tec_Rlk PTKc_Tec_like PTKc_FAK PTKc_Src_like PTKc_Abl PTKc_FGFR PTKc_EphR PTKc_InsR_like PTKc_Chk PTKc_EGFR_like PTKc_Btk_Bmx NAF PTKc_Itk PTKc_Frk_like PTKc_EphR_A PTKc_PDGFR PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_EphR_B PTKc_Ror PTKc_Csk protein|CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",1.3550063,null,20.1,"stress.biotic","Os07g0106700","Transcript","Dirigent protein|dirigent, putative, expressed",7.312433,null,33.99,"development.unspecified","Os03g0825700","Transcript","nearly identical (1073) AT3G09090 | Symbols: DEX1 | DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | chr3:2783165-2787552 REVERSE protein|FG-GAP repeat-containing protein, putative, expressed",-1.0877773]
[null,"16.5.99.1","secondary metabolism.sulfur-containing.misc.alliinase","Os01g0717400","Transcript","moderately similar to ( 414) AT1G34060 | Symbols: | alliinase family protein | chr1:12396561-12398299 REVERSEAlliinase_C EGF_alliinase protein|alliin lyase precursor, putative, expressed",3.366272,null,29.4,"protein.postranslational modification","Os02g0769900","Transcript","moderately similar to ( 437) AT1G05750 | Symbols: PDE247, CLB19 | PDE247 (pigment defective 247) | chr1:1721523-1723025 FORWARDvery weakly similar to (99.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.1371251,null,20.1,"stress.biotic","Os06g0691200","Transcript","moderately similar to ( 270) AT1G73620 | Symbols: | thaumatin-like protein, putative / pathogenesis-related protein, putative | chr1:27681432-27682954 FORWARDweakly similar to ( 191) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin family domain containing protein, expressed",2.5318286,null,33.99,"development.unspecified","Os06g0332800","Transcript","weakly similar to ( 112) AT3G47650 | Symbols: | bundle-sheath defective protein 2 family / bsd2 family | chr3:17569576-17570262 FORWARD protein|bundle sheath defective protein 2, putative, expressed",1.6800913]
[null,"16.8.1.21","secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase","Os04g0606000","Transcript","weakly similar to ( 164) AT3G29670 | Symbols: | transferase family protein | chr3:11527952-11529307 FORWARDTransferase protein|transferase family protein, putative, expressed",-1.0785271,null,29.4,"protein.postranslational modification","Os01g0925700","Transcript","moderately similar to ( 425) AT5G50860 | Symbols: | protein kinase family protein | chr5:20693778-20696983 REVERSEmoderately similar to ( 211) CDC22_MEDSA Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr PTKc TyrKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Src_like PTKc_Fes_like PTKc_Abl PTKc_Jak1_rpt2 protein|protein kinase domain containing protein, expressed",-1.0012909,null,20.1,"stress.biotic","Os12g0468300","Transcript","weakly similar to ( 102) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3992846,null,33.99,"development.unspecified","Os02g0623300","Transcript","weakly similar to ( 165) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 131) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",3.0280483]
[null,"16.8.1.21","secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase","Os02g0483500","Transcript","weakly similar to ( 150) AT5G39050 | Symbols: | transferase/ transferase, transferring acyl groups other than amino-acyl groups | chr5:15634596-15636005 FORWARDTransferase protein|transferase family protein, putative, expressed",-1.3254503,null,29.4,"protein.postranslational modification","Os12g0113500","Transcript","moderately similar to ( 495) AT5G07070 | Symbols: CIPK2, SnRK3.2 | CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:2196743-2198113 REVERSEmoderately similar to ( 405) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Abl PTKc_Fes_like PTKc_Fer PTKc_FAK PTKc_Fes PTKc_Tec_like PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_FGFR PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_Trk PTKc_Chk PTKc_EphR_A PTKc_InsR_like PTKc_Btk_Bmx PTKc_Itk PTKc_Tec_Rlk PTKc_Lck_Blk NAF PTKc_Syk_like PTKc_Csk PTKc_PDGFR PTKc_Fyn_Yrk PTKc_Tyro3 PTKc_FGFR4 PTKc_FGFR1 PTKc_Hck PTKc_Axl_like protein|CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.4671364,null,20.1,"stress.biotic","Os01g0621900","Transcript","moderately similar to ( 447) AT1G64140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE protein|expressed protein",-1.0719166,null,33.99,"development.unspecified","Os01g0833000","Transcript","highly similar to ( 560) AT5G39980 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16001036-16003072 REVERSEweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.97713]
[null,"16.8.1.21","secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase","Os07g0414000","Transcript","weakly similar to ( 160) AT1G03940 | Symbols: | transferase family protein | chr1:1009542-1010951 REVERSETransferase protein|transferase family protein, putative, expressed",4.363775,null,29.4,"protein.postranslational modification","Os10g0157400","Transcript","weakly similar to ( 158) AT1G67580 | Symbols: | protein kinase family protein | chr1:25327727-25330965 REVERSEweakly similar to ( 129) CDC22_ORYSA Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|calcium-dependent protein kinase 12, putative, expressed",-1.0128752,null,20.1,"stress.biotic","Os01g0139000","Transcript","weakly similar to ( 184) AT3G18260 | Symbols: | reticulon family protein (RTNLB9) | chr3:6260328-6261504 REVERSE Reticulon protein|reticulon domain containing protein, putative, expressed",3.424846,null,33.99,"development.unspecified","Os06g0708700","Transcript","moderately similar to ( 324) AT3G45870 | Symbols: | integral membrane family protein / nodulin MtN21-related | chr3:16867633-16868838 FORWARD protein|integral membrane protein, putative, expressed",2.1390414]
[null,"16.8.2","secondary metabolism.flavonoids.chalcones","Os11g0530600","Transcript","highly similar to ( 675) AT5G13930 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | chr5:4488762-4490035 FORWARDhighly similar to ( 786) CHSY_ORYSA Chalcone synthase (EC 2.3.1.74) (Naregenin-chalcone synthase) - Oryza sativa (Rice)Chal_sti_synt_N CHS_like Chal_sti_synt_C BcsA cond_enzymes decarbox_cond_enzymes init_cond_enzymes protein|chalcone synthase, putative, expressed",4.57839,null,29.4,"protein.postranslational modification","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126,null,20.1,"stress.biotic","Os03g0132900","Transcript","moderately similar to ( 277) AT3G12500 | Symbols: ATHCHIB, PR3, PR-3, CHI-B, B-CHI | ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase | chr3:3962501-3963945 REVERSEmoderately similar to ( 298) CHIA_SECCE Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed chitinase-a) (RSC-a) - Secale cereale (Rye) Glyco_hydro_19 chitinase_glyco_hydro_19 protein|CHIT16 - Chitinase family protein precursor, expressed",-1.4874182,null,33.99,"development.unspecified","Os01g0826900","Transcript","highly similar to ( 783) AT3G56140 | Symbols: | unknown protein | chr3:20829407-20832669 FORWARDDUF399 protein|expressed protein",1.6502084]
[null,"16.8.2","secondary metabolism.flavonoids.chalcones","Os07g0571600","Transcript","moderately similar to ( 216) AT3G63170 | Symbols: | chalcone isomerase | chr3:23334675-23335993 FORWARD protein|chalcone isomerase, putative, expressed",1.990911,null,29.4,"protein.postranslational modification","Os03g0262200","Transcript","moderately similar to ( 360) AT4G08500 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MEKK1 (MAP KINASE KINASE KINASE 1); DNA binding / MAP kinase kinase kinase/ kinase/ kinase binding / protein binding | chr4:5404272-5407062 REVERSEweakly similar to ( 123) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_FAK PTKc_Ack_like PTKc_Src_like PTKc_InsR_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_c-ros PTKc_Fes_like PTKc_Syk_like PTKc_Tec_like PTKc_Fer PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Trk PTKc_PDGFR PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Src PTKc_Abl PTKc_Axl_like PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTK_CCK4 PTKc_Yes PTKc_Jak1_rpt2 PTKc_Axl PTKc_Hck PTKc_Tec_Rlk PTKc_Itk PTKc_Tyro3 PTKc_Csk PTKc_Musk PTKc_EphR PTKc_Syk PTKc_Chk PTKc_FGFR PTKc_Fes PTKc_Btk_Bmx PTKc_DDR PTKc_RET PTKc_Tie PTKc_FGFR2 PTKc_Tie1 PTKc_FGFR4 PTKc_TrkB PTKc_FGFR3 PTKc_Tie2 PTKc_IGF-1R PTKc_InsR PTKc_FGFR1 PTKc_EGFR PTK_HER3 PTKc_TrkC PTKc_TrkA PTK_Ryk PTKc_HER4 PTKc_Zap-70 PTKc_VEGFR PTKc_Met_Ron PTKc_VEGFR2 PTKc_PDGFR_alpha PTKc_Ror PTKc_VEGFR3 protein|STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-1.1983789,null,20.1,"stress.biotic","Os07g0617100","Transcript","protein|dirigent, putative, expressed",2.6670353,null,33.99,"development.unspecified","Os03g0597200","Transcript","highly similar to ( 786) AT3G53700 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest 40) | chr3:19900303-19902567 FORWARDmoderately similar to ( 303) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.4445262]
[null,"16.8.2","secondary metabolism.flavonoids.chalcones","Os11g0529800","Transcript","moderately similar to ( 243) AT5G13930 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | chr5:4488762-4490035 FORWARDmoderately similar to ( 257) CHS2_SECCE Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone synthase 2) - Secale cereale (Rye)CHS_like Chal_sti_synt_N BcsA Chal_sti_synt_C decarbox_cond_enzymes cond_enzymes init_cond_enzymes protein|chalcone and stilbene synthases, putative, expressed",2.0538366,null,29.4,"protein.postranslational modification","Os12g0198200","Transcript","moderately similar to ( 217) AT1G07160 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr1:2198155-2199678 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-2.2590168,null,20.1,"stress.biotic","Os10g0370400","Transcript","very weakly similar to (91.3) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",-1.0561796,null,33.99,"development.unspecified","Os06g0128400","Transcript","highly similar to ( 692) AT3G56990 | Symbols: EDA7 | EDA7 (embryo sac development arrest 7) | chr3:21088358-21091976 REVERSE protein|NUC153 domain containing protein, expressed",-1.4244264]
[null,"16.8.2","secondary metabolism.flavonoids.chalcones","Os07g0214900","Transcript","highly similar to ( 608) AT5G13930 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | chr5:4488762-4490035 FORWARDhighly similar to ( 669) CHSY_ORYSA Chalcone synthase (EC 2.3.1.74) (Naregenin-chalcone synthase) - Oryza sativa (Rice)Chal_sti_synt_N CHS_like Chal_sti_synt_C BcsA cond_enzymes decarbox_cond_enzymes init_cond_enzymes protein|chalcone synthase, putative, expressed",4.0250535,null,29.4,"protein.postranslational modification","Os07g0687300","Transcript","moderately similar to ( 213) AT5G21170 | Symbols: | 5'-AMP-activated protein kinase beta-2 subunit, putative | chr5:7205718-7208239 FORWARD AMPKbeta_GBD_like protein|SNF1-related protein kinase regulatory subunit beta-1, putative, expressed",-0.95514697,null,20.1,"stress.biotic","Os02g0199200","Transcript","NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.2066263,null,33.99,"development.unspecified","Os06g0107750","Transcript","moderately similar to ( 208) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|nodulin, putative, expressed",-1.9533561]
[null,"16.8.2","secondary metabolism.flavonoids.chalcones","Os03g0237100","Transcript","moderately similar to ( 369) AT1G59960 | Symbols: | aldo/keto reductase, putative | chr1:22071410-22073067 REVERSEmoderately similar to ( 417) NADO1_ORYSA Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-) - Oryza sativa (Rice) Aldo_ket_red ARA1 dkgA dkgB Tas protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",-1.0076208,null,29.4,"protein.postranslational modification","Os06g0526800","Transcript","moderately similar to ( 336) AT5G53140 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr5:21549228-21552132 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",1.9979123,null,20.1,"stress.biotic","Os06g0514800","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION9 - Plant thionin family protein precursor, expressed",-1.6636208,null,33.99,"development.unspecified","Os01g0217000","Transcript","moderately similar to ( 385) AT1G29050 | Symbols: | unknown protein | chr1:10136376-10139082 REVERSEDUF231 protein|powdery mildew resistant protein 5, putative, expressed",1.8833987]
[null,"16.8.3","secondary metabolism.flavonoids.dihydroflavonols","Os04g0630800","Transcript","moderately similar to ( 311) AT1G61720 | Symbols: BAN | BAN (BANYULS); oxidoreductase | chr1:22791326-22792757 REVERSEmoderately similar to ( 234) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG protein|leucoanthocyanidin reductase, putative, expressed",-2.04272,null,29.4,"protein.postranslational modification","Os07g0413700","Transcript","nearly identical (1157) AT2G31320 | Symbols: PARP2, ATPARP2 | PARP2 (POLY(ADP-RIBOSE) POLYMERASE 2); DNA binding / NAD or NADH binding / NAD+ ADP-ribosyltransferase/ zinc ion binding | chr2:13354046-13359578 REVERSEnearly identical (1896) PARP1_ORYSA Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) parp_like PARP PADR1 WGR zf-PARP PARP_reg protein|poly synthetase 1, putative, expressed",1.9944277,null,20.1,"stress.biotic","Os11g0226700","Transcript","weakly similar to ( 136) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|MLA10, putative, expressed",-1.1133829,null,33.99,"development.unspecified","Os01g0823500","Transcript","weakly similar to ( 102) AT1G06920 | Symbols: ATOFP4, OFP4 | OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4) | chr1:2124854-2125801 REVERSEDUF623 protein|DUF623 domain containing protein, expressed",2.3226073]
[null,"16.8.3","secondary metabolism.flavonoids.dihydroflavonols","Os11g0457000","Transcript","weakly similar to ( 118) AT5G54060 | Symbols: UF3GT | UF3GT (udp-glucose:flavonoid 3-O-glucosyltransferase); transferase, transferring glycosyl groups | chr5:21936902-21938308 REVERSEweakly similar to ( 189) UFOG_PETHY Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) protein|transposon protein, putative, Mariner sub-class, expressed",4.2879043,null,29.4,"protein.postranslational modification","Os04g0488000","Transcript","highly similar to ( 644) AT1G67580 | Symbols: | protein kinase family protein | chr1:25327727-25330965 REVERSEmoderately similar to ( 283) CDC21_ORYSA Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Jak1_rpt2 PTKc_Itk PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Syk_like PTKc_EphR_A PTKc_Tec_like PTKc_EphR_B PTKc_EphR_A2 PTKc_DDR PTKc_Srm_Brk protein|cyclin-dependent kinase G-2, putative, expressed",1.1843933,null,20.1,"stress.biotic","Os06g0513050","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION3 - Plant thionin family protein precursor, expressed",-1.6636208,null,33.99,"development.unspecified","Os06g0725000","Transcript","weakly similar to ( 160) AT4G35770 | Symbols: SEN1, ATSEN1, DIN1 | SEN1 (SENESCENCE 1) | chr4:16945073-16945964 FORWARDweakly similar to ( 157) DIN1_RAPSA Senescence-associated protein DIN1 - Raphanus sativus (Radish) RHOD RHOD protein|rhodanese-like domain containing protein, putative, expressed",3.0041504]
[null,"16.8.3","secondary metabolism.flavonoids.dihydroflavonols","Os07g0601000","Transcript","weakly similar to ( 145) AT4G27250 | Symbols: | dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family | chr4:13642803-13644425 REVERSEweakly similar to ( 121) DFRA_HORVU Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Hordeum vulgare (Barley) protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",2.1677816,null,29.4,"protein.postranslational modification","Os04g0288500","Transcript","moderately similar to ( 275) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 153) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase S_TKc Lectin_legB Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Ror PTKc_Srm_Brk PTKc_EphR_B PTKc_Trk PTKc_Syk_like PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_EphR_A2 PTKc_Abl PTKc_Src_like PTKc_Fes_like PTKc_EphR_A PTKc_Tec_like PTKc_InsR_like PTKc_Frk_like PTKc_Itk PTKc_TrkA PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Fes PTKc_Fer PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Ror2 PTKc_TrkC PTKc_Zap-70 PTKc_DDR PTK_Jak2_Jak3_rpt1 PTKc_FAK protein|protein kinase, putative, expressed",-2.1872857,null,20.1,"stress.biotic","Os02g0102800","Transcript","highly similar to ( 907) AT4G19040 | Symbols: EDR2 | EDR2; lipid binding | chr4:10431799-10437171 REVERSEDUF1336 START START START protein|START domain containing protein, expressed",2.264417,null,33.99,"development.unspecified","Os03g0843500","Transcript","moderately similar to ( 429) AT5G17440 | Symbols: | LUC7 N_terminus domain-containing protein | chr5:5749849-5753415 FORWARD LUC7 LUC7 protein|RNA-binding protein Luc7-like, putative, expressed",1.9870229]
[null,"16.8.3","secondary metabolism.flavonoids.dihydroflavonols","Os04g0630100","Transcript","weakly similar to ( 197) AT1G61720 | Symbols: BAN | BAN (BANYULS); oxidoreductase | chr1:22791326-22792757 REVERSEweakly similar to ( 156) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG protein|leucoanthocyanidin reductase, putative, expressed",3.6255887,null,29.4,"protein.postranslational modification","Os02g0135300","Transcript","moderately similar to ( 462) AT1G02970 | Symbols: WEE1, ATWEE1 | WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG); kinase/ protein kinase | chr1:673408-676127 FORWARDvery weakly similar to (90.1) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) Pkinase S_TKc S_TKc SPS1 Pkinase_Tyr PTKc TyrKc protein|wee1-like protein kinase, putative, expressed",-1.3554794,null,20.1,"stress.biotic","Os10g0491000","Transcript","weakly similar to ( 172) AT2G15220 | Symbols: | secretory protein, putative | chr2:6608689-6609366 FORWARDBSP protein|secretory protein, putative, expressed",-1.8751928,null,33.99,"development.unspecified","Os06g0275000","Transcript","weakly similar to ( 199) AT3G02380 | Symbols: COL2 | COL2 (constans-like 2); transcription factor/ zinc ion binding | chr3:487438-488624 REVERSECCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.0695515]
[null,"16.8.3","secondary metabolism.flavonoids.dihydroflavonols","Os07g0598000","Transcript","weakly similar to ( 170) AT4G27250 | Symbols: | dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family | chr4:13642803-13644425 REVERSEweakly similar to ( 164) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",3.8498523,null,29.4,"protein.postranslational modification","Os03g0314400","Transcript","moderately similar to ( 349) AT2G13600 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:5671493-5673586 FORWARDvery weakly similar to (95.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.3869253,null,20.1,"stress.biotic","Os06g0702700","Transcript","weakly similar to ( 181) AT2G24390 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related (TAIR:AT4G31310.1); Has 167 Blast hits to 167 proteins in 49 species: Archae - 12; Bacteria - 32; Metazoa - 0; Fungi - 33; Plants - 61; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | chr2:10373796-10374654 FORWARD protein|AIG2-like family domain containing protein, expressed",-1.2020655,null,33.99,"development.unspecified","Os10g0422600","Transcript","very weakly similar to (81.3) AT2G25690 | Symbols: | senescence-associated protein-related | chr2:10940530-10941649 REVERSE protein|DUF581 domain containing protein, expressed",2.5280125]
[null,"16.8.4","secondary metabolism.flavonoids.flavonols","Os01g0352100","Transcript","moderately similar to ( 291) AT1G17010 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:5817667-5819183 FORWARDweakly similar to ( 178) FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) PcbC 2OG-FeII_Oxy protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed",3.340451,null,29.4,"protein.postranslational modification","Os10g0564500","Transcript","moderately similar to ( 500) AT4G33950 | Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase | chr4:16272819-16274657 FORWARDhighly similar to ( 615) SAPK3_ORYSA Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Jak1_rpt2 PTKc_Btk_Bmx PTKc_Tec_like PTKc_Syk_like PTKc_Tec_Rlk PTKc_Csk_like PTKc_Ack_like protein|CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",1.4809216,null,20.1,"stress.biotic","Os02g0538700","Transcript","weakly similar to ( 169) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",5.4522204,null,33.99,"development.unspecified","Os03g0115300","Transcript","highly similar to ( 521) AT3G53170 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G48730.1); Has 17188 Blast hits to 5538 proteins in 167 species: Archae - 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants - 16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | chr3:19704729-19706417 REVERSEweakly similar to ( 131) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.1379328]
[null,"16.8.4","secondary metabolism.flavonoids.flavonols","Os09g0248900","Transcript","moderately similar to ( 249) AT5G41980 | Symbols: | unknown protein | chr5:16793765-16794889 FORWARD protein|retrotransposon protein, putative, unclassified, expressed",6.0013676,null,29.4,"protein.postranslational modification","Os03g0808600","Transcript","highly similar to ( 691) AT5G12480 | Symbols: CPK7 | CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:4047817-4050035 REVERSEmoderately similar to ( 478) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc FRQ1 protein|CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-0.9945205,null,20.1,"stress.biotic","Os02g0605900","Transcript","moderately similar to ( 322) AT3G54420 | Symbols: ATEP3, ATCHITIV, CHIV | ATEP3; chitinase | chr3:20145935-20147034 FORWARDmoderately similar to ( 298) CHI4_PHAVU Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT1 - Chitinase family protein precursor, expressed",-1.6030992,null,33.99,"development.unspecified","Os02g0750400","Transcript","highly similar to ( 569) AT4G39620 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) | chr4:18395294-18397578 FORWARDweakly similar to ( 137) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.5473924]
[null,"16.8.5.1","secondary metabolism.flavonoids.isoflavones.isoflavone reductase","Os02g0705000","Transcript","moderately similar to ( 379) AT4G34540 | Symbols: | isoflavone reductase family protein | chr4:16500506-16501932 FORWARDmoderately similar to ( 276) IFRH_TOBAC Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco)NmrA protein|nmrA-like family domain containing protein, expressed",1.6759638,null,29.4,"protein.postranslational modification","Os05g0480000","Transcript","highly similar to ( 560) AT5G01920 | Symbols: STN8 | STN8; kinase/ protein kinase | chr5:359154-360867 FORWARDmoderately similar to ( 248) STT7_CHLRE Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii S_TKc Pkinase S_TKc SPS1 protein|serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed",1.9188571,null,20.1,"stress.biotic","Os03g0243900","Transcript","moderately similar to ( 266) AT4G38660 | Symbols: | thaumatin, putative | chr4:18066448-18067792 REVERSEmoderately similar to ( 210) TLP1_PRUPE Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach)THN Thaumatin protein|thaumatin, putative, expressed",5.939701,null,33.99,"development.unspecified","Os08g0191900","Transcript","highly similar to ( 670) AT3G59040 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:21821495-21824233 REVERSEweakly similar to ( 138) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.335797]
[null,"16.8.5.1","secondary metabolism.flavonoids.isoflavones.isoflavone reductase","Os01g0106300","Transcript","moderately similar to ( 317) AT1G75290 | Symbols: | oxidoreductase, acting on NADH or NADPH | chr1:28253890-28255173 FORWARDmoderately similar to ( 387) IFRH_MAIZE Isoflavone reductase homolog IRL (EC 1.3.1.-) - Zea mays (Maize)NmrA protein|isoflavone reductase homolog IRL, putative, expressed",7.7359977,null,29.4,"protein.postranslational modification","Os05g0460800","Transcript","weakly similar to ( 194) AT5G59770 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase (TAIR:AT5G10480.2); Has 525 Blast hits to 525 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr5:24079521-24081195 REVERSE PTPLA protein|expressed protein",1.4790215,null,20.1,"stress.biotic","Os12g0159600","Transcript","weakly similar to ( 183) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.0807091,null,33.99,"development.unspecified","Os06g0172000","Transcript","highly similar to ( 563) AT5G48730 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19763152-19765136 FORWARDweakly similar to ( 119) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.6701217]
[null,16.1,"secondary metabolism.simple phenols","Os01g0850700","Transcript","moderately similar to ( 261) AT3G09220 | Symbols: LAC7 | LAC7 (laccase 7); laccase | chr3:2827434-2830477 REVERSEweakly similar to ( 119) ASO_CUCSA L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) Cu-oxidase_3 SufI protein|laccase precursor protein, putative, expressed",6.7043138,null,29.4,"protein.postranslational modification","Os04g0514800","Transcript","highly similar to ( 535) AT4G14340 | Symbols: CKI1, CKL11 | CKI1 (CASEIN KINASE I); kinase/ protein serine/threonine kinase | chr4:8248532-8251668 REVERSE S_TKc Pkinase SPS1 S_TKc protein|CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed",1.7678499,null,20.1,"stress.biotic","Os10g0105933","Transcript","moderately similar to ( 220) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 106) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.1420423,null,33.99,"development.unspecified","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655]
[null,16.1,"secondary metabolism.simple phenols","Os11g0708100","Transcript","highly similar to ( 760) AT2G38080 | Symbols: IRX12, LAC4 | IRX12 (IRREGULAR XYLEM 12); laccase | chr2:15934540-15937352 FORWARDmoderately similar to ( 202) ASO_CUCMA L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 SufI protein|laccase-22 precursor, putative, expressed",4.13629,null,29.4,"protein.postranslational modification","Os06g0667500","Transcript","moderately similar to ( 212) AT1G31160 | Symbols: | zinc-binding protein, putative / protein kinase C inhibitor, putative | chr1:11122880-11124106 REVERSEweakly similar to ( 195) ZB14_MAIZE 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) PKCI_related PRK10687 HIT Hit HINT_subgroup protein|histidine triad family protein, putative, expressed",1.6757437,null,20.1,"stress.biotic","Os08g0375400","Transcript","very weakly similar to (81.3) AT1G22900 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: disease resistance-responsive family protein (TAIR:AT5G42500.1); Has 560 Blast hits to 559 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8103910-8104491 REVERSEDirigent protein|dirigent, putative, expressed",4.7085958,null,33.99,"development.unspecified","Os11g0149400","Transcript","very weakly similar to (98.6) PSK2_ORYSA Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] - Oryza sativa (Rice) protein|phytosulfokines precursor, putative, expressed",2.3102272]
[{"$nulls":8},29.4,"protein.postranslational modification","Os04g0488200","Transcript","moderately similar to ( 476) AT4G38010 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:17859582-17861261 REVERSEvery weakly similar to (91.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1440507,null,20.1,"stress.biotic","Os11g0654100","Transcript","weakly similar to ( 108) AT3G50950 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr3:18936127-18938685 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",5.4555035,null,33.99,"development.unspecified","Os05g0563000","Transcript","moderately similar to ( 332) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.2179844]
[null,"17.1.1","hormone metabolism.abscisic acid.synthesis-degradation","Os03g0250200","Transcript","moderately similar to ( 220) AT1G75700 | Symbols: HVA22G | HVA22G (HVA22-LIKE PROTEIN G) | chr1:28423956-28424931 FORWARD TB2_DP1_HVA22 protein|HVA22, putative, expressed",3.818896,null,29.4,"protein.postranslational modification","Os05g0332300","Transcript","highly similar to ( 575) AT5G58380 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SIP1 (SOS3-INTERACTING PROTEIN 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:23597092-23598531 REVERSEmoderately similar to ( 439) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Srm_Brk PTKc_Fer PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Ror PTKc_Fes PTKc_Src_like PTKc_Frk_like PTKc_Abl PTKc_Tec_like PTKc_Chk PTKc_Tec_Rlk PTKc_EGFR_like PTKc_FAK PTKc_Ack_like PTKc_Btk_Bmx PTKc_PDGFR PTKc_EphR PTKc_Itk PTKc_InsR_like PTKc_EphR_A PTKc_Lck_Blk PTKc_Csk protein|CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.441363,null,20.1,"stress.biotic","Os08g0190300","Transcript","weakly similar to ( 152) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",2.215337,null,33.99,"development.unspecified","Os01g0852900","Transcript","highly similar to ( 551) AT3G09060 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2766367-2768430 REVERSEmoderately similar to ( 275) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.3285623]
[null,"17.1.1.1.10","hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase","Os02g0704000","Transcript","highly similar to ( 605) AT4G19170 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD RPE65 COG3670 protein|9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed",-2.4485574,null,29.4,"protein.postranslational modification","Os10g0539600","Transcript","highly similar to ( 721) AT2G17290 | Symbols: CPK6, ATCDPK3 | CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr2:7517005-7519239 FORWARDnearly identical (1090) CDPK1_ORYSA Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 FRQ1 protein|CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.3820488,null,20.1,"stress.biotic","Os01g0350000","Transcript","moderately similar to ( 307) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 154) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.5405397,null,33.99,"development.unspecified","Os06g0109200","Transcript","moderately similar to ( 245) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|auxin-induced protein 5NG4, putative, expressed",3.9187546]
[null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os11g0498600","Transcript","weakly similar to ( 150) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 160) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 YOP1 protein|HVA22, putative, expressed",2.6062984,null,29.4,"protein.postranslational modification","Os09g0459600","Transcript","highly similar to ( 522) AT1G47380 | Symbols: | protein phosphatase 2C-related / PP2C-related | chr1:17373004-17375305 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphotase protein, putative, expressed",1.6641855,null,20.1,"stress.biotic","Os08g0522500","Transcript","moderately similar to ( 428) AT1G05850 | Symbols: POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1 | POM1 (POM-POM1); chitinase | chr1:1766833-1768117 REVERSEmoderately similar to ( 207) CHI2_BRANA Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT12 - Chitinase family protein precursor, expressed",1.569142,null,33.99,"development.unspecified","Os01g0117900","Transcript","moderately similar to ( 381) AT3G18200 | Symbols: | nodulin MtN21 family protein | chr3:6234509-6235531 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3783941]
[null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os04g0527000","Transcript","weakly similar to ( 183) AT5G08350 | Symbols: | GRAM domain-containing protein / ABA-responsive protein-related | chr5:2686417-2687175 REVERSE protein|GEM, putative, expressed",1.1323467,null,29.4,"protein.postranslational modification","Os07g0150700","Transcript","highly similar to ( 720) AT1G30270 | Symbols: CIPK23, SnRK3.23, ATCIPK23, LKS1 | CIPK23 (CBL-INTERACTING PROTEIN KINASE 23); kinase/ protein binding / protein serine/threonine kinase | chr1:10655270-10658524 FORWARDhighly similar to ( 603) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Srm_Brk PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Fer PTKc_Fes PTKc_FAK PTKc_Ack_like PTKc_Chk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Src_like PTKc_Abl PTKc_Jak1_rpt2 PTKc_Csk PTKc_Tec_like NAF PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Frk_like PTKc_InsR_like PTKc_EphR PTKc_Jak2_Jak3_rpt2 protein|CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.7380567,null,"20.1.1","stress.biotic.respiratory burst","Os12g0541300","Transcript","highly similar to ( 973) AT5G51060 | Symbols: RHD2, ATRBOHC, RBOHC | RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase | chr5:20757484-20762175 REVERSE NAD_binding_6 NADPH_Ox FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",2.361488,null,33.99,"development.unspecified","Os10g0477600","Transcript","moderately similar to ( 237) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 177) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",1.9038072]
[null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os09g0450600","Transcript","weakly similar to ( 102) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 114) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 protein|HVA22, putative, expressed",1.2709488,null,29.4,"protein.postranslational modification","Os05g0134000","Transcript","highly similar to ( 582) AT5G26751 | Symbols: ATSK11, SK 11 | ATSK11; protein kinase/ protein serine/threonine kinase | chr5:9399582-9401839 REVERSEhighly similar to ( 595) MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like PTKc_Tyk2_rpt2 protein|CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed",-1.1218661,null,"20.1.1","stress.biotic.respiratory burst","Os01g0360200","Transcript","highly similar to ( 981) AT5G47910 | Symbols: RBOHD, ATRBOHD | RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | chr5:19397585-19401768 FORWARD NADPH_Ox NAD_binding_6 FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",3.1213465,null,33.99,"development.unspecified","Os05g0442700","Transcript","weakly similar to ( 191) AT5G22380 | Symbols: anac090 | anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | chr5:7408924-7410038 REVERSEweakly similar to ( 116) NAC71_ORYSA NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",-1.5360001]
[null,"17.2.2","hormone metabolism.auxin.signal transduction","Os01g0919800","Transcript","moderately similar to ( 351) AT5G16530 | Symbols: PIN5 | PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter | chr5:5400735-5402626 FORWARDhighly similar to ( 506) PIN6_ORYSA Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice)Mem_trans protein|auxin efflux carrier component, putative, expressed",-2.1748767,null,29.4,"protein.postranslational modification","Os05g0593800","Transcript","highly similar to ( 641) AT1G72710 | Symbols: CKL2 | CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr1:27372553-27376178 FORWARD S_TKc Pkinase S_TKc SPS1 Pkinase_Tyr protein|CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed",-0.9744732,null,"20.1.7","stress.biotic.PR-proteins","Os04g0470500","Transcript","moderately similar to ( 365) AT4G26090 | Symbols: RPS2 | RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding | chr4:13224596-13227325 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",-1.1549082,null,33.99,"development.unspecified","Os01g0254100","Transcript","nearly identical (1576) AT3G16830 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) | chr3:5731709-5737531 FORWARD WD40 COG2319 protein|lissencephaly type-1-like homology motif, putative, expressed",-1.1587647]
[null,"17.2.2","hormone metabolism.auxin.signal transduction","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767,null,29.4,"protein.postranslational modification","Os07g0566200","Transcript","moderately similar to ( 444) AT1G03590 | Symbols: | catalytic/ protein serine/threonine phosphatase | chr1:894480-896257 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.4502363,null,"20.1.7","stress.biotic.PR-proteins","Os01g0953400","Transcript","moderately similar to ( 215) AT5G45500 | Symbols: | unknown protein | chr5:18432636-18434951 REVERSE protein|Leucine Rich Repeat family protein, expressed",1.2142234,null,33.99,"development.unspecified","Os12g0178633","Transcript","moderately similar to ( 423) AT5G54200 | Symbols: | WD-40 repeat family protein | chr5:21993565-21997076 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.3121089]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os04g0337500","Transcript","moderately similar to ( 484) AT1G60730 | Symbols: | aldo/keto reductase family protein | chr1:22358613-22360082 REVERSEmoderately similar to ( 451) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 PRK10376 PRK09912 COG4989 PRK10625 COG1453 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",6.735754,null,29.4,"protein.postranslational modification","Os02g0725000","Transcript","highly similar to ( 707) AT5G47750 | Symbols: D6PKL2, PK5 | D6PKL2 (D6 PROTEIN KINASE LIKE 2); kinase | chr5:19339947-19341864 REVERSEhighly similar to ( 816) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr SPS1 TyrKc PTKc protein|AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed",4.56811,null,"20.1.7","stress.biotic.PR-proteins","Os11g0179000","Transcript","weakly similar to ( 141) AT5G49040 | Symbols: | disease resistance-responsive protein-related / dirigent protein-related | chr5:19882676-19883251 REVERSEDirigent protein|dirigent, putative, expressed",3.859347,null,33.99,"development.unspecified","Os02g0734500","Transcript","weakly similar to ( 102) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",-1.1643081]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os09g0546900","Transcript","very weakly similar to (99.4) AT5G27780 | Symbols: | auxin-responsive family protein | chr5:9838885-9839313 REVERSE protein|OsSAUR53 - Auxin-responsive SAUR gene family member, expressed",1.039621,null,29.4,"protein.postranslational modification","Os02g0654300","Transcript","highly similar to ( 770) AT2G44830 | Symbols: | protein kinase, putative | chr2:18490398-18492779 FORWARDhighly similar to ( 607) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|AGC_PVPK_like_kin82y.6 - ACG kinases include homologs to PKA, PKG and PKC, expressed",2.1567822,null,"20.1.7","stress.biotic.PR-proteins","Os01g0603100","Transcript","weakly similar to ( 191) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",1.8115629,null,33.99,"development.unspecified","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0556400","Transcript","moderately similar to ( 307) AT3G61750 | Symbols: | auxin-responsive protein -related | chr3:22857897-22859254 REVERSE B561 protein|auxin-responsive protein, putative, expressed",5.386839,null,29.4,"protein.postranslational modification","Os11g0242200","Transcript","moderately similar to ( 228) AT2G40180 | Symbols: ATHPP2C5 | ATHPP2C5; catalytic/ protein serine/threonine phosphatase | chr2:16782522-16784014 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.6713899,null,"20.1.7","stress.biotic.PR-proteins","Os10g0130800","Transcript","moderately similar to ( 217) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|disease resistance RPP13-like protein 1, putative, expressed",1.999849,null,33.99,"development.unspecified","Os03g0151700","Transcript","highly similar to ( 990) AT3G21540 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:7586100-7590856 REVERSE Utp12 WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0246056]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os10g0510500","Transcript","very weakly similar to (85.9) AT2G46690 | Symbols: | auxin-responsive family protein | chr2:19180904-19181269 FORWARD protein|CPuORF40 - conserved peptide uORF-containing transcript, expressed",-1.1871086,null,29.4,"protein.postranslational modification","Os06g0639500","Transcript","highly similar to ( 712) AT4G32250 | Symbols: | protein kinase family protein | chr4:15570285-15572528 REVERSE S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc SPS1 PTKc protein|protein kinase domain containing protein, expressed",1.2263685,null,"20.1.7","stress.biotic.PR-proteins","Os11g0179700","Transcript","weakly similar to ( 152) AT5G42500 | Symbols: | disease resistance-responsive family protein | chr5:16994359-16994916 REVERSEDirigent protein|dirigent, putative, expressed",2.4432633,null,33.99,"development.unspecified","Os01g0776400","Transcript","highly similar to ( 520) AT2G16405 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:7105915-7108787 REVERSE WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9476285]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os06g0499500","Transcript","highly similar to ( 564) AT1G28130 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido synthetase | chr1:9826379-9827883 FORWARDnearly identical (1191) GH37_ORYSA Probable indole-3-acetic acid-amido synthetase GH3.7 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 7) (OsGH3-7) - Oryza sativa (Rice)GH3 protein|OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed",1.0032129,null,29.4,"protein.postranslational modification","Os06g0232100","Transcript","moderately similar to ( 493) AT1G18160 | Symbols: | protein kinase family protein | chr1:6249126-6253835 FORWARDweakly similar to ( 115) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc S_TKc PTKc Pkinase S_TKc PTKc_Src_like PTKc_Abl PTKc_Csk_like PTKc_InsR_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Fes_like PTKc_FGFR PTKc_Ack_like PTKc_Chk PTKc_Btk_Bmx PTKc_FAK PTKc_EphR PTKc_Frk_like PTKc_Fer PTKc_PDGFR PTKc_EGFR_like PTKc_Tec_Rlk PTKc_Trk PTKc_Csk PTKc_Syk_like PTKc_Itk PTKc_DDR PTKc_Fyn_Yrk PTKc_Ror PTKc_Tie2 PTKc_IGF-1R PTKc_EphR_B PTK_CCK4 PTKc_Met_Ron PTKc_Fes PTKc_Yes PTKc_FGFR3 PTKc_FGFR1 PTKc_FGFR2 PTKc_Lck_Blk PTKc_Axl_like PTKc_Src PTKc_FGFR4 PTKc_EphR_A2 PTKc_Tie1 PTKc_EphR_A PTKc_InsR PTKc_Musk PTKc_ALK_LTK PTKc_TrkA PTKc_Ror1 PTKc_RET PTKc_EGFR PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_HER4 PTKc_DDR_like PTKc_DDR2 PTKc_c-ros PTKc_Hck PTKc_Tyro3 PTKc_HER2 PTKc_TrkB PTKc_TrkC PTKc_Tie PTKc_EphR_A10 PTKc_Ror2 PTK_Ryk PTKc_VEGFR PTKc_Axl PTK_HER3 SPS1 PTKc_Jak1_rpt2 PTKc_Syk PTKc_DDR1 PTKc_Zap-70 PTKc_Tyk2_rpt2 PTKc_Aatyk PTKc_VEGFR3 PTKc_PDGFR_alpha PTKc_PDGFR_beta PTKc_Kit PTKc_VEGFR2 PTKc_CSF-1R PTKc_Aatyk1_Aatyk3 PTK_Jak_rpt1 PTKc_Aatyk2 protein|protein kinase, putative, expressed",-1.0694047,null,"20.1.7","stress.biotic.PR-proteins","Os11g0652100","Transcript","very weakly similar to (89.0) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE protein|expressed protein",1.8690187,null,33.99,"development.unspecified","Os07g0525100","Transcript","moderately similar to ( 236) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.456244]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194900","Transcript","moderately similar to ( 357) AT3G25290 | Symbols: | auxin-responsive family protein | chr3:9208955-9210353 FORWARD B561 DUF568 protein|membrane protein, putative, expressed",-1.1955652,null,29.4,"protein.postranslational modification","Os01g0191800","Transcript","moderately similar to ( 498) AT4G32830 | Symbols: AtAUR1 | AtAUR1 (ATAURORA1); histone kinase(H3-S10 specific) / kinase/ protein serine/threonine kinase | chr4:15842557-15844354 FORWARDweakly similar to ( 169) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr PTKc TyrKc PTKc_FAK PTK_CCK4 PTKc_Fes_like PTKc_Tec_like PTKc_Trk PTKc_ALK_LTK PTKc_Abl PTKc_Csk_like PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Syk_like PTKc_FGFR PTKc_Ack_like PTKc_Fes PTKc_Tec_Rlk PTKc_Btk_Bmx PTKc_Ror PTKc_Musk PTKc_Src_like PTKc_Itk PTKc_InsR_like PTKc_TrkC PTKc_TrkA PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Syk PTKc_Frk_like PTKc_c-ros PTKc_TrkB PTKc_Lyn protein|CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.9497192,null,"20.1.7","stress.biotic.PR-proteins","Os07g0273700","Transcript","moderately similar to ( 290) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|WRKY123, expressed",4.3932843,null,33.99,"development.unspecified","Os03g0640100","Transcript","highly similar to ( 750) AT5G58230 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | chr5:23556112-23557994 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0269638]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os01g0618100","Transcript","moderately similar to ( 394) AT1G60690 | Symbols: | aldo/keto reductase family protein | chr1:22349892-22351668 REVERSEmoderately similar to ( 372) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 COG4989 PRK10376 COG1453 PRK09912 PRK10625 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",1.3380041,null,29.4,"protein.postranslational modification","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606,null,"20.1.7","stress.biotic.PR-proteins","Os10g0130600","Transcript","moderately similar to ( 298) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|powdery mildew resistance protein PM3b, putative, expressed",-1.62406,null,33.99,"development.unspecified","Os09g0423300","Transcript","highly similar to ( 878) AT4G30825 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:15009605-15012319 FORWARDweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",3.2283523]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194600","Transcript","weakly similar to ( 102) AT5G48750 | Symbols: | auxin-responsive protein, putative | chr5:19770052-19770819 REVERSE DUF568 protein|AIR12, putative, expressed",-2.172973,null,29.4,"protein.postranslational modification","Os07g0619800","Transcript","highly similar to ( 780) AT3G50530 | Symbols: CRK | CRK (CDPK-related kinase); ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protein serine/threonine kinase | chr3:18753833-18756487 FORWARDhighly similar to ( 785) CRK_DAUCA CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Tec_like PTKc_Srm_Brk PTKc_Itk PTKc_Src_like PTKc_Tec_Rlk PTKc_Jak_rpt2 PTKc_Btk_Bmx PTKc_Trk PTKc_PDGFR PTKc_Csk_like protein|CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.014764,null,"20.1.7","stress.biotic.PR-proteins","Os11g0645400","Transcript","weakly similar to ( 104) AT1G65870 | Symbols: | disease resistance-responsive family protein | chr1:24503624-24504193 FORWARDDirigent protein|dirigent, putative, expressed",8.899306]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os07g0475700","Transcript","protein|OsSAUR30 - Auxin-responsive SAUR gene family member, expressed",1.9867239,null,29.4,"protein.postranslational modification","Os01g0150200","Transcript","moderately similar to ( 225) AT5G10480 | Symbols: PAS2, PEP | PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | chr5:3298047-3299980 REVERSE PTPLA protein|expressed protein",-0.98855084,null,"20.1.7","stress.biotic.PR-proteins","Os04g0111100","Transcript","moderately similar to ( 241) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|rp1, putative, expressed",-1.3740374]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0437200","Transcript","moderately similar to ( 260) AT1G43130 | Symbols: LCV2 | LCV2 (LIKE COV 2) | chr1:16228661-16231158 REVERSEDUF502 COG2928 protein|protein of unknown function DUF502 domain containing protein, expressed",-1.0361265,null,29.4,"protein.postranslational modification","Os02g0241600","Transcript","highly similar to ( 917) AT3G58640 | Symbols: | protein kinase family protein | chr3:21687153-21692675 REVERSEweakly similar to ( 109) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase PTKc_Csk_like PTKc_Src_like PTKc_EphR PTKc_Tec_like PTKc_Frk_like PTKc_Abl PTKc_InsR_like PTKc_FAK PTKc_Tec_Rlk PTKc_Chk PTKc_Btk_Bmx PTKc_Itk PTKc_EGFR_like PTKc_Ack_like PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_FGFR PTKc_Lck_Blk PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Yes PTKc_Fyn_Yrk PTKc_Src PTK_CCK4 PTKc_EphR_A PTKc_DDR PTKc_c-ros PTKc_Syk_like PTKc_Musk PTKc_RET PTKc_Csk PTKc_Trk PTKc_EphR_B PTKc_Ror PTKc_FGFR2 PTKc_PDGFR PTKc_HER4 PTKc_DDR2 PTKc_FGFR3 PTKc_DDR_like PTKc_FGFR4 PTKc_TrkA SPS1 PTKc_Axl PTKc_Lyn PTKc_Axl_like PTKc_IGF-1R PTKc_FGFR1 PTKc_Met_Ron PTKc_Fes PTKc_DDR1 PTK_Ryk PTKc_TrkC PTKc_Tie1 PTKc_HER2 PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR PTKc_Aatyk PTKc_EGFR PTKc_TrkB PTKc_Tie PTKc_Tie2 PTKc_Tyro3 PTKc_Fer PTKc_Jak1_rpt2 PTKc_Zap-70 PTKc_Syk PTKc_Aatyk2 PTKc_VEGFR PTKc_VEGFR2 PTKc_Ror1 PTKc_EphR_A10 PTKc_Ror2 PTK_HER3 PTKc_Tyk2_rpt2 PTKc_Aatyk1_Aatyk3 PTKc_PDGFR_alpha PTKc_Kit PTKc_VEGFR3 PTKc_PDGFR_beta protein|protein kinase domain containing protein, expressed",1.3957996,null,"20.1.7","stress.biotic.PR-proteins","Os11g0629600","Transcript","weakly similar to ( 117) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",-1.0702428]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0643800","Transcript","very weakly similar to (84.0) AT2G45210 | Symbols: | auxin-responsive protein-related | chr2:18641884-18642372 FORWARDAuxin_inducible protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed",-0.9625449,null,29.4,"protein.postranslational modification","Os04g0304200","Transcript","highly similar to ( 981) AT3G45780 | Symbols: PHOT1, NPH1, JK224, RPT1 | PHOT1 (PHOTOTROPIN 1); FMN binding / blue light photoreceptor/ kinase/ protein binding / protein serine/threonine kinase | chr3:16818557-16823960 FORWARDmoderately similar to ( 355) KPK1_PHAVU Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed",1.779159,null,"20.1.7","stress.biotic.PR-proteins","Os01g0721300","Transcript","very weakly similar to (81.3) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD protein|NB-ARC domain containing protein, expressed",-1.2860575]
[null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0158800","Transcript","highly similar to ( 824) AT3G26370 | Symbols: | unknown protein | chr3:9656886-9659741 FORWARDDUF246 protein|growth regulator related protein, putative, expressed",1.3208412,null,29.4,"protein.postranslational modification","Os01g0864700","Transcript","highly similar to ( 637) AT3G44200 | Symbols: ATNEK6, NEK6, IBO1 | NEK6 (\"NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6\"); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:15906788-15911365 FORWARDweakly similar to ( 129) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_FAK PTKc_Ack_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Src_like PTKc_Syk_like PTKc_Lck_Blk PTKc_Src PTKc_Itk PTKc_InsR_like PTKc_Abl PTKc_Csk PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Frk_like PTKc_EphR PTKc_PDGFR PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_TrkB PTKc_Ror PTKc_Lyn protein|protein kinase domain containing protein, expressed",3.0941658,null,"20.1.7","stress.biotic.PR-proteins","Os09g0357400","Transcript","weakly similar to ( 166) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC DUF1263 protein|retrotransposon protein, putative, unclassified, expressed",-1.6483129]
[null,"17.3.1.1.1","hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2","Os01g0851600","Transcript","weakly similar to ( 163) AT2G38050 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase | chr2:15921303-15922176 REVERSE Steroid_dh protein|3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed",1.7856712,null,29.4,"protein.postranslational modification","Os07g0507500","Transcript","weakly similar to ( 193) AT2G25010 | Symbols: | unknown protein | chr2:10631691-10633547 FORWARD protein|expressed protein",-2.1964633,null,"20.1.7","stress.biotic.PR-proteins","Os11g0657900","Transcript","moderately similar to ( 236) AT5G48620 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr5:19717406-19720932 FORWARD NB-ARC protein|RGH1A, putative, expressed",-2.0279644]
[null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os02g0113200","Transcript","moderately similar to ( 455) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 466) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450, putative, expressed",3.5112286,null,29.4,"protein.postranslational modification","Os02g0180000","Transcript","highly similar to ( 571) AT4G31860 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr4:15406685-15408589 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",1.4267823,null,"20.1.7","stress.biotic.PR-proteins","Os01g0760400","Transcript","highly similar to ( 998) AT4G23440 | Symbols: | nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor | chr4:12237765-12240659 FORWARD protein|AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",-1.2372891]
[null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os05g0211100","Transcript","moderately similar to ( 483) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 486) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450 51, putative, expressed",1.6188742,null,29.4,"protein.postranslational modification","Os02g0617600","Transcript","weakly similar to ( 121) AT1G17720 | Symbols: ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | chr1:6093949-6098065 REVERSEweakly similar to ( 123) 2ABA_ORYSA Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) CDC55 protein|serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed",2.428065,null,"20.1.7","stress.biotic.PR-proteins","Os09g0481600","Transcript","highly similar to ( 989) AT5G56220 | Symbols: | nucleoside-triphosphatase/ nucleotide binding | chr5:22754871-22757792 FORWARD protein|AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",3.2311223]
[null,"17.3.1.2.6","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7","Os01g0134500","Transcript","moderately similar to ( 387) AT3G02580 | Symbols: STE1, DWF7, BUL1 | STE1 (STEROL 1); C-5 sterol desaturase | chr3:547048-548615 FORWARDmoderately similar to ( 387) SC5D_TOBAC Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) protein|fatty acid hydroxylase, putative, expressed",2.5228798,null,29.4,"protein.postranslational modification","Os07g0568600","Transcript","highly similar to ( 805) AT5G19450 | Symbols: CDPK19, CPK8 | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:6558672-6561471 REVERSEhighly similar to ( 516) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc FRQ1 protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.2445259,null,"20.1.7","stress.biotic.PR-proteins","Os11g0644700","Transcript","weakly similar to ( 105) AT5G42510 | Symbols: | disease resistance-responsive family protein | chr5:16998268-16998816 REVERSEDirigent protein|dirigent, putative, expressed",6.1477056]
[null,"17.3.1.2.7","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5","Os02g0465400","Transcript","highly similar to ( 575) AT1G50430 | Symbols: DWF5, PA, LE, ST7R, 7RED | DWF5 (DWARF 5); sterol delta7 reductase | chr1:18682175-18685555 REVERSE ERG4_ERG24 protein|delta14-sterol reductase, putative, expressed",-1.0864153,null,29.4,"protein.postranslational modification","Os08g0512600","Transcript","moderately similar to ( 400) AT1G20930 | Symbols: CDKB2;2 | CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinase | chr1:7292752-7294664 REVERSEmoderately similar to ( 383) CDC2D_ANTMA Cell division control protein 2 homolog D (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) S_TKc S_TKc Pkinase SPS1 protein|cyclin-dependent kinase B2-1, putative, expressed",4.8130536,null,"20.1.7","stress.biotic.PR-proteins","Os09g0272900","Transcript","moderately similar to ( 306) AT1G12220 | Symbols: RPS5 | RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | chr1:4145011-4147680 FORWARD NB-ARC protein|disease resistance protein RPS2, putative, expressed",-1.7700769]
[null,"17.4.1","hormone metabolism.cytokinin.synthesis-degradation","Os03g0810100","Transcript","moderately similar to ( 274) AT3G63110 | Symbols: ATIPT3, IPT3 | ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups | chr3:23318437-23319447 REVERSE miaA MiaA protein|IPP transferase, putative, expressed",-1.1375446,null,29.4,"protein.postranslational modification","Os05g0168800","Transcript","very weakly similar to (94.0) AT5G58320 | Symbols: | kinase interacting protein-related | chr5:23578094-23579531 FORWARD protein|KIP1, putative, expressed",3.1746738,null,"20.1.7","stress.biotic.PR-proteins","Os10g0163040","Transcript","moderately similar to ( 384) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3213081]
[null,"17.4.2","hormone metabolism.cytokinin.signal transduction","Os09g0529900","Transcript","moderately similar to ( 284) AT4G10750 | Symbols: | HpcH/HpaI aldolase family protein | chr4:6618724-6619800 FORWARDHpcH HpcH_HpaI PRK10558 PRK10128 protein|4-hydroxy-2-oxovalerate aldolase, putative, expressed",1.2707883,null,29.4,"protein.postranslational modification","Os02g0640500","Transcript","highly similar to ( 582) AT2G37710 | Symbols: RLK | RLK (receptor lectin kinase); kinase | chr2:15814934-15816961 REVERSEweakly similar to ( 196) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Lectin_legB Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_EphR PTKc_Jak_rpt2 SPS1 PTKc_EphR_A2 PTKc_Tec_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Src_like PTKc_EGFR_like PTKc_EphR_B PTKc_Csk_like PTKc_EphR_A PTKc_Syk_like PTKc_Trk PTKc_Abl PTKc_Itk PTKc_FAK PTKc_Btk_Bmx PTKc_Fes_like PTKc_Tec_Rlk PTKc_Ack_like PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_InsR_like PTKc_DDR PTKc_Chk PTKc_Aatyk PTKc_Ror PTKc_Csk PTKc_c-ros PTKc_Axl_like PTK_HER3 PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Fes PTK_CCK4 PTKc_Yes PTKc_Musk PTKc_Lyn PTKc_FGFR PTKc_Met_Ron PTKc_HER4 protein|lectin receptor-type protein kinase, putative, expressed",1.3651978,null,"20.1.7","stress.biotic.PR-proteins","Os06g0146100","Transcript","moderately similar to ( 268) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|NBS-LRR disease resistance protein, putative, expressed",1.5859522]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os02g0280700","Transcript","moderately similar to ( 286) AT5G20400 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:6894871-6896185 FORWARDweakly similar to ( 172) LDOX_MALDO Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",3.7561703,null,29.4,"protein.postranslational modification","Os03g0841800","Transcript","highly similar to ( 718) AT1G09840 | Symbols: ATSK41 | ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase | chr1:3196114-3199524 REVERSEhighly similar to ( 660) MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like protein|CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed",1.6212746,null,"20.1.7","stress.biotic.PR-proteins","Os11g0639600","Transcript","moderately similar to ( 222) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|non-TIR-NBS-LRR type resistance protein, putative, expressed",-1.0066692]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os08g0390200","Transcript","moderately similar to ( 283) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 240) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",4.8504515,null,29.4,"protein.postranslational modification","Os12g0162100","Transcript","moderately similar to ( 400) AT1G49160 | Symbols: WNK7 | WNK7; kinase/ protein kinase | chr1:18179473-18181867 REVERSEvery weakly similar to (89.7) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase TyrKc Pkinase_Tyr PTKc SPS1 PTKc_Jak_rpt2 PTKc_Jak1_rpt2 PTKc_Srm_Brk PTKc_Ack_like PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_EGFR_like PTKc_Src_like PTKc_InsR_like PTKc_Syk_like PTKc_Tyk2_rpt2 protein|STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-1.1642562,null,"20.1.7","stress.biotic.PR-proteins","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0690500","Transcript","moderately similar to ( 250) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 226) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",-1.3304685,null,29.4,"protein.postranslational modification","Os04g0271200","Transcript","moderately similar to ( 307) AT5G10480 | Symbols: PAS2, PEP | PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | chr5:3298047-3299980 REVERSE PTPLA Ptpl protein|expressed protein",-1.3546611,null,"20.1.7","stress.biotic.PR-proteins","Os04g0111900","Transcript","moderately similar to ( 316) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|disease resistance protein RGA3, putative, expressed",-1.3404331]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os01g0352100","Transcript","moderately similar to ( 291) AT1G17010 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:5817667-5819183 FORWARDweakly similar to ( 178) FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) PcbC 2OG-FeII_Oxy protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed",3.340451,null,29.4,"protein.postranslational modification","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579,null,"20.1.7","stress.biotic.PR-proteins","Os04g0648200","Transcript","moderately similar to ( 329) AT1G74190 | Symbols: AtRLP15 | AtRLP15 (Receptor Like Protein 15); protein binding | chr1:27902590-27906158 REVERSEweakly similar to ( 181) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) protein|Cf-4A protein, putative, expressed",-2.462386]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0439500","Transcript","moderately similar to ( 234) AT1G17020 | Symbols: SRG1, ATSRG1 | SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | chr1:5820258-5821741 FORWARDweakly similar to ( 160) FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",1.6984366,null,29.4,"protein.postranslational modification","Os01g0892800","Transcript","highly similar to ( 604) AT2G31800 | Symbols: | ankyrin protein kinase, putative | chr2:13520605-13523646 REVERSEvery weakly similar to (91.7) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Ack_like PTKc_InsR_like PTKc_Fes_like PTKc_Ror PTKc_Srm_Brk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Frk_like PTKc_Tec_like PTKc_FGFR PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Csk PTKc_Itk PTKc_DDR PTKc_Abl PTKc_FAK PTKc_Fer PTKc_ALK_LTK SPS1 PTKc_EphR_B PTKc_Jak1_rpt2 PTKc_Lck_Blk PTKc_Btk_Bmx PTKc_RET PTKc_EphR_A2 PTKc_Lyn PTKc_Tyk2_rpt2 PTKc_EphR_A PTKc_Ror1 ANK PTKc_EGFR_like PTKc_PDGFR PTKc_Trk PTKc_Musk PTKc_FGFR1 PTK_CCK4 PTKc_Fyn_Yrk PTKc_EphR_A10 PTKc_Fes protein|serine/threonine protein kinase, putative, expressed",-1.0663403]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0451000","Transcript","moderately similar to ( 400) AT1G05010 | Symbols: EFE, ACO4, EAT1 | EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | chr1:1431419-1432695 REVERSEhighly similar to ( 568) ACCO1_ORYSA 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed",2.1812222,null,29.4,"protein.postranslational modification","Os05g0440800","Transcript","highly similar to ( 607) AT3G44200 | Symbols: ATNEK6, NEK6, IBO1 | NEK6 (\"NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6\"); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:15906788-15911365 FORWARDweakly similar to ( 127) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Jak_rpt2 PTKc_Tec_like PTKc_FAK PTKc_Ack_like PTKc_Srm_Brk PTKc_InsR_like PTKc_Itk PTKc_Src_like PTKc_Lck_Blk PTKc_EphR_B PTKc_EphR PTKc_Src PTKc_Tyk2_rpt2 PTKc_FGFR PTKc_Syk_like PTKc_Tec_Rlk PTKc_EphR_A protein|protein kinase, putative, expressed",1.8811064,null,20.2,"stress.abiotic","Os08g0546100","Transcript","moderately similar to ( 216) AT5G52060 | Symbols: ATBAG1 | ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding | chr5:21152449-21153741 REVERSE BAG1_N protein|BAG domain-containing protein, putative, expressed",1.8338398]
[null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0248900","Transcript","moderately similar to ( 249) AT5G41980 | Symbols: | unknown protein | chr5:16793765-16794889 FORWARD protein|retrotransposon protein, putative, unclassified, expressed",6.0013676,null,29.4,"protein.postranslational modification","Os07g0678600","Transcript","highly similar to ( 550) AT5G58380 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SIP1 (SOS3-INTERACTING PROTEIN 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:23597092-23598531 REVERSEmoderately similar to ( 437) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Fes PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Abl PTKc_Fer PTKc_Tec_like PTKc_Src_like PTKc_Frk_like PTKc_Ack_like PTKc_FAK PTKc_Tec_Rlk PTKc_EphR PTKc_FGFR PTKc_Itk PTKc_EGFR_like PTKc_PDGFR PTKc_Ror PTKc_Btk_Bmx PTKc_Chk PTK_CCK4 protein|CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.0833645,null,20.2,"stress.abiotic","Os04g0626400","Transcript","moderately similar to ( 382) AT3G47860 | Symbols: | apolipoprotein D-related | chr3:17656778-17658269 REVERSE protein|OsCHL Chloroplastic lipocalin, expressed",3.1646068]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108,null,29.4,"protein.postranslational modification","Os03g0755000","Transcript","highly similar to ( 713) AT1G69220 | Symbols: SIK1 | SIK1; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr1:26020298-26026119 REVERSEweakly similar to ( 152) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc SPS1 PTKc PTKc_Jak_rpt2 KIND PTKc_Fes_like PTKc_FAK PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like PTK_CCK4 PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_InsR_like PTKc_Src_like PTKc_Tec_Rlk PTKc_Srm_Brk PTKc_Itk PTKc_FGFR PTKc_Btk_Bmx PTKc_Ror PTKc_Abl PTKc_Jak1_rpt2 PTKc_RET PTKc_EphR PTKc_Syk PTKc_Trk PTKc_Zap-70 PTKc_Musk PTKc_Csk_like PTKc_ALK_LTK PTKc_Ack_like PTKc_Ror1 PTKc_Fer PTKc_Frk_like PTKc_Fes PTKc_DDR PTKc_c-ros PTK_HER3 PTKc_PDGFR PTKc_TrkB PTKc_Lck_Blk PTKc_EphR_B PTKc_FGFR2 PTKc_Tie2 PTKc_Csk PTKc_Src PTKc_TrkA PTKc_EphR_A2 PTKc_Tie protein|STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-0.9904855,null,20.2,"stress.abiotic","Os04g0619900","Transcript","weakly similar to ( 176) AT5G52060 | Symbols: ATBAG1 | ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding | chr5:21152449-21153741 REVERSEBAG1_N protein|ATBAG1, putative, expressed",1.5734392]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os10g0450000","Transcript","weakly similar to ( 114) AT3G50150 | Symbols: | unknown protein | chr3:18595809-18597551 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",4.2582054,null,29.4,"protein.postranslational modification","Os09g0339000","Transcript","moderately similar to ( 314) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 170) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc SPS1 PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_EphR_A PTKc_EphR_B PTKc_Frk_like PTKc_FAK PTKc_Ror PTKc_TrkB PTKc_EphR_A2 PTKc_Syk_like PTKc_Csk_like PTKc_Tec_like PTKc_Fer PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Btk_Bmx PTKc_DDR PTKc_TrkC PTKc_Fes PTKc_c-ros PTKc_Lck_Blk PTKc_Itk PTKc_TrkA PTKc_Musk PTKc_Csk PTKc_Tyk2_rpt2 PTKc_DDR_like PTKc_Tec_Rlk PTKc_EGFR_like PTKc_Fyn_Yrk protein|cysteine-rich receptor-like protein kinase 25 precursor, putative, expressed",-1.281829,null,20.2,"stress.abiotic","Os05g0220100","Transcript","moderately similar to ( 421) AT1G16560 | Symbols: | Per1-like family protein | chr1:5669234-5670343 FORWARD Per1 PER1 protein|per1-like family protein, putative, expressed",-1.1220307]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0163200","Transcript","weakly similar to ( 105) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1524832,null,29.4,"protein.postranslational modification","Os11g0113700","Transcript","moderately similar to ( 490) AT5G07070 | Symbols: CIPK2, SnRK3.2 | CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:2196743-2198113 REVERSEmoderately similar to ( 404) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Abl PTKc_Fes_like PTKc_Fer PTKc_FAK PTKc_Fes PTKc_Tec_like PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_Ack_like PTKc_FGFR PTKc_Chk PTKc_Jak1_rpt2 PTKc_InsR_like PTKc_Trk PTKc_Btk_Bmx PTKc_EphR_A PTKc_Itk PTKc_Tec_Rlk PTKc_Syk_like PTKc_Lck_Blk NAF PTKc_PDGFR PTKc_Csk PTKc_Tyro3 PTKc_Fyn_Yrk PTKc_Axl_like PTKc_FGFR4 PTKc_Hck PTKc_FGFR1 protein|CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.5787117,null,20.2,"stress.abiotic","Os02g0204400","Transcript","highly similar to ( 708) AT3G15620 | Symbols: UVR3 | UVR3 (UV REPAIR DEFECTIVE 3); DNA (6-4) photolyase | chr3:5294201-5296548 REVERSEweakly similar to ( 133) PHR1_SINAL Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) FAD_binding_7 PhrB PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",2.474655]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057,null,29.4,"protein.postranslational modification","Os03g0118400","Transcript","moderately similar to ( 473) AT3G48750 | Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase | chr3:18072238-18074296 FORWARDhighly similar to ( 549) CDC21_ORYSA Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Ack_like PTKc_Abl PTKc_Fes PTKc_Tyk2_rpt2 PTKc_Src_like PTKc_Ror PTKc_Jak2_Jak3_rpt2 protein|cyclin-dependent kinase A-1, putative, expressed",1.0222226,null,"20.2.1","stress.abiotic.heat","Os02g0217900","Transcript","very weakly similar to (96.3) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 104) HSP21_PEA 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) HSP20 protein|hsp20/alpha crystallin family protein, putative, expressed",-3.372493]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os09g0304500","Transcript","weakly similar to ( 119) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1891744,null,29.4,"protein.postranslational modification","Os03g0638000","Transcript","moderately similar to ( 264) AT3G22790 | Symbols: | kinase interacting family protein | chr3:8052446-8057888 REVERSE KIP1 Smc protein|KIP1, putative, expressed",1.4630132,null,"20.2.1","stress.abiotic.heat","Os02g0526400","Transcript","highly similar to ( 855) AT5G51070 | Symbols: ERD1, CLPD | ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr5:20764479-20768481 FORWARDhighly similar to ( 647) CLPC_PEA ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) clpA clpC PRK10865 clpA AAA_2 protein|ERD1 protein, chloroplast precursor, putative, expressed",-2.2417166]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0310600","Transcript","weakly similar to ( 150) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.4500562,null,29.4,"protein.postranslational modification","Os07g0114000","Transcript","moderately similar to ( 368) AT4G33920 | Symbols: | protein phosphatase 2C family protein / PP2C family protein | chr4:16260876-16262703 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.1291896,null,"20.2.1","stress.abiotic.heat","Os01g0875700","Transcript","moderately similar to ( 216) AT3G08910 | Symbols: | DNAJ heat shock protein, putative | chr3:2710402-2711811 REVERSEvery weakly similar to (90.5) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ protein|dnaJ domain containing protein, expressed",2.6231723]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0198500","Transcript","moderately similar to ( 298) AT1G47740 | Symbols: | unknown protein | chr1:17567903-17569035 FORWARD DUF862 protein|ethylene-responsive element-binding protein, putative, expressed",1.7501227,null,29.4,"protein.postranslational modification","Os12g0604700","Transcript","highly similar to ( 585) AT3G04810 | Symbols: ATNEK2 | ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:1318096-1321101 FORWARDweakly similar to ( 110) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Jak_rpt2 PTKc_FAK PTKc_Csk PTKc_Srm_Brk PTKc_InsR_like PTKc_Itk PTKc_Ack_like PTKc_EphR_B PTKc_Ror protein|LSTK-1-like kinase, putative, expressed",2.9530475,null,"20.2.1","stress.abiotic.heat","Os01g0180800","Transcript","nearly identical (1130) AT1G79920 | Symbols: | ATP binding | chr1:30058935-30062224 REVERSEmoderately similar to ( 273) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 DnaK dnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2255234]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os11g0543300","Transcript","moderately similar to ( 217) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.0513479,null,29.4,"protein.postranslational modification","Os12g0101800","Transcript","highly similar to ( 873) AT3G45780 | Symbols: PHOT1, NPH1, JK224, RPT1 | PHOT1 (PHOTOTROPIN 1); FMN binding / blue light photoreceptor/ kinase/ protein binding / protein serine/threonine kinase | chr3:16818557-16823960 FORWARDmoderately similar to ( 330) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 protein|AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed",-1.3193709,null,"20.2.1","stress.abiotic.heat","Os01g0702500","Transcript","moderately similar to ( 387) AT2G21510 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:9210841-9212699 REVERSEmoderately similar to ( 270) DHR25_ORYSA Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1) - Oryza sativa (Rice) DnaJ Dehydrin DnaJ DnaJ protein|dehydrin family protein, expressed",1.8170567]
[null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696,null,29.4,"protein.postranslational modification","Os07g0176600","Transcript","highly similar to ( 583) AT3G04810 | Symbols: ATNEK2 | ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:1318096-1321101 FORWARDweakly similar to ( 122) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr PTKc TyrKc SPS1 PTKc_Jak_rpt2 PTKc_FAK PTKc_Tec_like PTKc_InsR_like PTKc_Ack_like PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 protein|expressed protein",5.1052637,null,"20.2.1","stress.abiotic.heat","Os01g0136100","Transcript","weakly similar to ( 165) AT5G59720 | Symbols: HSP18.2 | HSP18.2 (heat shock protein 18.2) | chr5:24062632-24063117 FORWARDmoderately similar to ( 224) HSP11_ORYSA 16.9 kDa class I heat shock protein 1 - Oryza sativa (Rice) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",0.9654362]
[null,"17.6.1","hormone metabolism.gibberelin.synthesis-degradation","Os11g0265800","Transcript","very weakly similar to (80.9) AT1G52820 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:19669216-19670321 FORWARD protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.7052648,null,29.4,"protein.postranslational modification","Os05g0555100","Transcript","highly similar to ( 631) AT5G25510 | Symbols: | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | chr5:8882728-8884325 REVERSE B56 protein|transposon protein, putative, unclassified, expressed",4.233563,null,"20.2.1","stress.abiotic.heat","Os02g0115900","Transcript","highly similar to ( 992) AT5G42020 | Symbols: BIP | BIP2; ATP binding | chr5:16807697-16810480 REVERSEnearly identical (1068) BIP3_MAIZE Luminal-binding protein 3 precursor (BiP3) - Zea mays (Maize) HSP70 dnaK DnaK dnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.0845118]
[null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os03g0856700","Transcript","moderately similar to ( 434) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 712) GAOX1_ORYSA Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 1, putative, expressed",1.865975,null,29.4,"protein.postranslational modification","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,null,"20.2.1","stress.abiotic.heat","Os12g0514500","Transcript","highly similar to ( 979) AT3G07770 | Symbols: | ATP binding | chr3:2479611-2483970 FORWARDhighly similar to ( 516) HSP83_IPONI Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PRK05218 HtpG HSP90 protein|heat shock protein, putative, expressed",-1.598486]
[null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os01g0883800","Transcript","moderately similar to ( 369) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 655) GAOX2_ORYSA Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 2, putative, expressed",1.0044001,null,"29.4.1.55","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V","Os12g0109850","Transcript","moderately similar to ( 389) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEvery weakly similar to (87.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.697567,null,"20.2.1","stress.abiotic.heat","Os01g0606900","Transcript","weakly similar to ( 120) AT1G71000 | Symbols: | heat shock protein binding | chr1:26769336-26770111 REVERSE DnaJ DnaJ protein|heat shock protein DnaJ, putative, expressed",-1.5562181]
[null,"17.7.1.3","hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase","Os02g0110200","Transcript","moderately similar to ( 367) AT4G15440 | Symbols: HPL1, CYP74B2 | HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:8835869-8838462 FORWARDmoderately similar to ( 278) C74A4_ORYSA Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) protein|cytochrome P450, putative, expressed",3.3673182,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0365100","Transcript","moderately similar to ( 457) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 189) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc SPS1 PTKc_Met_Ron PTKc_Itk PTKc_Trk PTKc_Jak_rpt2 PTKc_EGFR_like PTKc_Syk_like PTKc_Tec_like PTKc_Srm_Brk PTKc_DDR PTKc_Src_like PTKc_Fes_like PTKc_Btk_Bmx PTKc_InsR_like PTKc_Fer PTKc_Ack_like PTKc_Frk_like PTKc_FAK PTKc_TrkA PTK_CCK4 PTKc_Tec_Rlk PTK_HER3 PTKc_EphR PTKc_c-ros PTKc_DDR_like PTKc_EphR_A2 PTKc_Abl PTKc_TrkC PTKc_Axl_like PTKc_TrkB PTKc_Ror PTKc_HER4 PTKc_ALK_LTK PTKc_Csk_like PTKc_Lck_Blk PTKc_PDGFR PTKc_Src PTKc_Fes PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Lyn PTKc_Chk PTKc_IGF-1R PTK_Ryk PTKc_Syk PTKc_Jak2_Jak3_rpt2 PTKc_Tyk2_rpt2 PTKc_Zap-70 PTKc_DDR1 PTKc_InsR PTKc_RET PTKc_EphR_B PTKc_DDR2 PTKc_Yes PTKc_Ror1 protein|OsWAK37 - OsWAK short gene, expressed",-1.7192389,null,"20.2.1","stress.abiotic.heat","Os02g0181900","Transcript","nearly identical (1317) AT2G25140 | Symbols: HSP98.7, CLPB-M, CLPB4 | CLPB4 (CASEIN LYTIC PROTEINASE B4); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr2:10697877-10701998 REVERSEhighly similar to ( 719) HS101_ORYSA Heat shock protein 101 - Oryza sativa (Rice) clpA PRK10865 clpC clpA AAA_2 protein|chaperone protein clpB 1, putative, expressed",-2.0256364]
[null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os01g0701700","Transcript","moderately similar to ( 308) AT4G36470 | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr4:17215128-17216475 REVERSEmoderately similar to ( 226) BAMT_ANTMA Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon)Methyltransf_7 protein|SAM dependent carboxyl methyltransferase, putative, expressed",-2.0907042,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126,null,"20.2.1","stress.abiotic.heat","Os02g0464900","Transcript","moderately similar to ( 219) AT5G57130 | Symbols: | protein binding | chr5:23145291-23149395 FORWARD protein|ATP binding, related, putative, expressed",1.4324527]
[null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0370900","Transcript","moderately similar to ( 391) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 163) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase SPS1 PTKc_Csk_like PTKc_Fes_like PTKc_Trk PTKc_RET PTKc_Ror PTKc_Fer PTKc_EphR PTKc_Jak_rpt2 PTKc_TrkA PTKc_Src_like PTKc_Frk_like PTKc_Chk PTKc_InsR_like PTKc_Fes PTKc_Itk PTKc_EGFR_like PTKc_Abl PTKc_Srm_Brk PTKc_FAK PTKc_EphR_A2 PTKc_Tie1 PTKc_ALK_LTK PTKc_Tec_like PTKc_Tie PTKc_Ack_like PTKc_Csk PTKc_FGFR PTKc_Axl_like PTKc_Btk_Bmx PTKc_IGF-1R PTKc_Tec_Rlk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_Met_Ron PTKc_Musk PTKc_EphR_B PTKc_Yes PTKc_Ror1 protein|OsWAK60 - OsWAK receptor-like protein kinase, expressed",-2.1680458,null,"20.2.1","stress.abiotic.heat","Os08g0250900","Transcript","highly similar to ( 524) AT5G57710 | Symbols: | heat shock protein-related | chr5:23384794-23388052 FORWARD clpA protein|heat shock protein-related, putative, expressed",-1.0348444]
[{"$nulls":8},"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0544100","Transcript","moderately similar to ( 266) AT5G45800 | Symbols: MEE62 | MEE62 (maternal effect embryo arrest 62); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr5:18575765-18578972 REVERSEweakly similar to ( 135) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) PTKc Pkinase TyrKc Pkinase_Tyr S_TKc S_TKc PTKc_Ror protein|receptor-like kinase, putative, expressed",1.1184515,null,"20.2.1","stress.abiotic.heat","Os01g0184100","Transcript","weakly similar to ( 133) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 170) HSP21_MAIZE 17.5 kDa class II heat shock protein - Zea mays (Maize) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",-1.986811]
[null,18.2,"Co-factor and vitamine metabolism.thiamine","Os06g0531200","Transcript","moderately similar to ( 481) AT1G53280 | Symbols: | DJ-1 family protein | chr1:19864942-19867341 REVERSE GATase1_DJ-1 PRK11574 ThiJ DJ-1_PfpI GATase1_PfpI_like GATase1_PfpI_2 protein|DJ-1 family protein, putative, expressed",1.5896063,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0251700","Transcript","moderately similar to ( 395) AT2G45590 | Symbols: | protein kinase family protein | chr2:18786725-18788776 FORWARDvery weakly similar to (95.1) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) PTKc Pkinase_Tyr S_TKc Pkinase S_TKc TyrKc protein|protein kinase, putative, expressed",1.2490149,null,"20.2.1","stress.abiotic.heat","Os03g0293100","Transcript","moderately similar to ( 335) AT3G08970 | Symbols: ATERDJ3A, TMS1 | ATERDJ3A; oxidoreductase | chr3:2737589-2740265 FORWARD DnaJ DnaJ PRK10767 DnaJ SEC63 protein|heat shock protein DnaJ, putative, expressed",1.5868534]
[null,18.2,"Co-factor and vitamine metabolism.thiamine","Os03g0679700","Transcript","nearly identical (1098) AT2G29630 | Symbols: THIC | THIC (ThiaminC); ADP-ribose pyrophosphohydrolase/ catalytic/ iron-sulfur cluster binding | chr2:12667395-12669569 FORWARDPRK09284 ThiC ThiC protein|thiamine biosynthesis protein thiC, putative, expressed",3.4125168,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os08g0285600","Transcript","moderately similar to ( 298) AT5G11020 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr5:3486439-3488983 REVERSEweakly similar to ( 182) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase SPS1 PTKc_Jak_rpt2 PTKc_Fes_like PTKc_ALK_LTK PTKc_DDR PTKc_Ror PTKc_c-ros PTKc_Csk_like PTKc_Frk_like PTKc_Trk PTKc_InsR_like PTKc_Srm_Brk PTKc_EphR PTKc_Src_like PTKc_Axl_like PTKc_Chk PTKc_Tyro3 PTKc_Met_Ron PTK_CCK4 PTKc_DDR_like PTKc_Musk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Fer PTKc_FGFR PTKc_EGFR_like PTKc_DDR1 PTKc_Fes PTKc_TrkC PTKc_TrkB PTKc_Ror1 PTKc_TrkA PTKc_Syk_like PTKc_Itk PTKc_Csk PTKc_DDR2 PTKc_Tec_Rlk PTKc_Tie2 PTKc_Axl PTKc_Ack_like PTKc_Btk_Bmx PTKc_EphR_B PTKc_IGF-1R PTKc_RET PTKc_Lck_Blk PTKc_FAK PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Src PTKc_Tie PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_FGFR4 PTKc_EGFR PTKc_Aatyk protein|protein kinase domain containing protein, expressed",1.7579694,null,"20.2.1","stress.abiotic.heat","Os09g0482600","Transcript","nearly identical (1079) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1179) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.0954514]
[null,18.3,"Co-factor and vitamine metabolism.riboflavin","Os01g0757900","Transcript","moderately similar to ( 258) AT4G21470 | Symbols: ATFMN/FHY | ATFMN/FHY (riboflavin kinase/FMN hydrolase); FMN adenylyltransferase/ riboflavin kinase | chr4:11431284-11433197 FORWARD COG0637 Gph Hydrolase PRK10826 PRK10725 COG1011 protein|haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed",-1.5733361,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0599000","Transcript","moderately similar to ( 490) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 208) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk SPS1 PTKc_Tec_like PTKc_Fes_like PTKc_Src_like PTKc_EGFR_like PTKc_Frk_like PTKc_EphR PTKc_Srm_Brk PTKc_Fer PTKc_InsR_like PTKc_Axl_like PTKc_Trk PTKc_DDR PTKc_Tec_Rlk PTKc_Syk_like PTKc_Abl PTKc_Ack_like PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Src PTK_CCK4 PTKc_c-ros PTKc_EphR_A2 PTKc_Lck_Blk PTKc_Fes PTKc_EphR_B PTKc_Tie1 PTKc_IGF-1R PTKc_ALK_LTK PTKc_TrkA PTKc_Axl PTKc_Chk PTKc_PDGFR PTKc_Ror PTKc_RET PTKc_Lyn PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Tie PTKc_Csk PTKc_FGFR PTKc_TrkB PTKc_Musk PTK_HER3 PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_HER4 PTKc_DDR_like PTKc_InsR PTKc_Tyro3 PTKc_TrkC PTKc_Yes PTK_Ryk PTKc_Aatyk PTKc_Ror1 PTKc_Zap-70 PTKc_HER2 PTKc_EGFR PTKc_DDR1 PTKc_Hck PTKc_Syk PTKc_FGFR1 protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed",-1.2069334,null,"20.2.1","stress.abiotic.heat","Os09g0491772","Transcript","highly similar to ( 838) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 840) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA protein|DnaK family protein, putative, expressed",-2.79547]
[null,"18.3.1","Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II","Os05g0460600","Transcript","highly similar to ( 671) AT5G59750 | Symbols: | riboflavin biosynthesis protein, putative | chr5:24073397-24075411 FORWARD PRK09311 PRK09319 GTP_cyclohydro2 PRK09318 RibA GTP_cyclohydro2 PRK12485 ribA PRK09314 RibB DHBP_synthase ribB ribB ribB PRK08815 ribB protein|riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed",2.643425,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0281500","Transcript","highly similar to ( 748) AT3G46290 | Symbols: | protein kinase, putative | chr3:17013009-17015501 FORWARDmoderately similar to ( 264) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Src_like PTK_CCK4 PTKc_Met_Ron PTKc_Itk PTKc_EphR PTKc_Tec_like PTKc_FGFR PTKc_Csk PTKc_Frk_like PTKc_Ror PTKc_Fer PTKc_TrkA PTKc_InsR_like PTKc_TrkB PTKc_Syk_like PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_FGFR1 PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Tie1 PTKc_FGFR4 PTKc_FGFR2 PTKc_TrkC PTKc_Chk PTKc_Fyn_Yrk PTKc_RET PTKc_Src PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Lyn PTKc_EGFR_like PTKc_FGFR3 PTKc_Axl_like PTKc_Lck_Blk PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_Abl PTKc_Tec_Rlk PTKc_Fes PTKc_FAK PTKc_Yes PTKc_Tie PTKc_IGF-1R PTKc_EphR_B PTKc_InsR PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Hck PTK_Ryk PTK_HER3 PTKc_EphR_A PTKc_Ror1 protein|TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed",-1.0393327,null,"20.2.1","stress.abiotic.heat","Os11g0703900","Transcript","highly similar to ( 934) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEhighly similar to ( 937) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2799143]
[null,"18.5.2.4","Co-factor and vitamine metabolism.folate & vitamine K.o-Succinyl-BenzoylCoa Synthetase","Os08g0130400","Transcript","moderately similar to ( 212) AT1G30520 | Symbols: AAE14 | AAE14 (Acyl-Activating Enzyme 14); AMP binding / o-succinylbenzoate-CoA ligase | chr1:10811039-10813546 FORWARD AMP-binding CaiC PRK08316 PRK07786 PRK07684 FAA1 PRK06187 PRK08162 PRK07770 PRK06188 PRK06839 Acs PRK08314 caiC PRK06087 PRK03640 PRK07514 PRK06145 PRK08276 PRK07798 PRK08279 PRK06368 PRK05605 PRK07470 PRK06219 PRK07771 PRK06164 PRK07656 EntF PRK06710 PRK06155 PRK09088 PRK07008 PRK09089 EntE protein|acyl-activating enzyme 14, putative, expressed",4.418789,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0110900","Transcript","highly similar to ( 509) AT1G07570 | Symbols: APK1A, APK1 | APK1A; kinase/ protein serine/threonine kinase | chr1:2331369-2333210 REVERSEmoderately similar to ( 229) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc Pkinase S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Tyk2_rpt2 PTKc_InsR_like PTKc_EphR PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Ror PTKc_DDR PTKc_Syk_like PTKc_DDR1 PTKc_Fes_like PTKc_Srm_Brk PTKc_Musk PTKc_Axl_like PTKc_c-ros PTKc_Ack_like PTKc_DDR_like PTKc_Src_like PTKc_EphR_A SPS1 PTKc_Itk PTK_HER3 PTKc_Jak2_Jak3_rpt2 PTKc_DDR2 PTKc_EphR_B PTKc_EphR_A2 PTKc_TrkC PTKc_RET PTKc_FGFR PTKc_TrkA PTKc_Fer PTKc_TrkB PTKc_Tec_like PTKc_ALK_LTK PTKc_Met_Ron PTKc_Chk PTKc_Abl PTK_CCK4 PTKc_Lck_Blk PTKc_Csk PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Syk PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Tie2 PTKc_Frk_like PTKc_Tec_Rlk PTKc_FAK PTKc_Tie1 PTKc_Hck PTKc_Ror1 PTKc_Axl PTKc_Fes PTKc_HER4 PTKc_Zap-70 PTKc_InsR PTKc_HER2 PTKc_Lyn PTKc_EphR_A10 PTKc_EGFR PTKc_Tie PTKc_Tyro3 protein|protein kinase APK1A, chloroplast precursor, putative, expressed",-1.02154,null,"20.2.1","stress.abiotic.heat","Os05g0460000","Transcript","nearly identical (1105) AT3G12580 | Symbols: HSP70 | HSP70 (heat shock protein 70); ATP binding | chr3:3991487-3993689 REVERSEnearly identical (1113) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.8242869]
[null,"18.5.2.8","Co-factor and vitamine metabolism.folate & vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase","Os04g0507800","Transcript","moderately similar to ( 299) AT1G23360 | Symbols: | UbiE/COQ5 methyltransferase family protein | chr1:8295421-8296339 REVERSE ubiE UbiE Ubie_methyltran protein|methyltransferase domain containing protein, putative, expressed",2.6061685,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os07g0618400","Transcript","moderately similar to ( 435) AT1G53730 | Symbols: SRF6 | SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | chr1:20061771-20065475 FORWARDweakly similar to ( 186) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr S_TKc Pkinase S_TKc PTKc TyrKc PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Tec_Rlk PTKc_Csk_like PTKc_Itk SPS1 PTKc_Fyn_Yrk PTK_Ryk PTKc_Frk_like PTKc_Src PTKc_Lck_Blk PTKc_EphR PTKc_Yes PTKc_Tyk2_rpt2 PTKc_Hck PTKc_FGFR PTKc_Fes_like protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",3.7902634,null,"20.2.1","stress.abiotic.heat","Os05g0156500","Transcript","moderately similar to ( 496) AT3G62600 | Symbols: ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding | chr3:23151038-23153346 REVERSEweakly similar to ( 173) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ PRK10266 DnaJ_C DnaJ CbpA protein|dnaJ homolog subfamily B member 11 precursor, putative, expressed",-1.0589027]
[null,18.11,"Co-factor and vitamine metabolism.lipoic acid","Os04g0455800","Transcript","highly similar to ( 533) AT2G20860 | Symbols: LIP1 | LIP1 (LIPOIC ACID SYNTHASE 1); lipoic acid synthase | chr2:8979636-8980983 FORWARD PRK05481 LipA PRK12928 protein|radical SAM enzyme, putative, expressed",1.1807331,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0511000","Transcript","moderately similar to ( 376) AT3G21630 | Symbols: CERK1, LYSM RLK1 | CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1); kinase/ receptor signaling protein/ transmembrane receptor protein kinase | chr3:7615543-7618530 REVERSEweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_Csk_like PTKc_Chk PTKc_Csk PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Tec_like PTKc_Abl PTKc_Fes_like PTKc_Btk_Bmx PTKc_FGFR PTKc_Syk_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_EGFR_like PTKc_Trk PTKc_Lck_Blk PTKc_DDR PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Itk PTKc_ALK_LTK PTKc_Fes PTKc_Yes PTKc_InsR_like PTKc_Srm_Brk PTKc_Tec_Rlk PTKc_Musk PTKc_Ack_like PTKc_FGFR1 PTKc_Hck PTKc_FAK PTK_CCK4 PTKc_Lyn PTKc_Tie2 PTKc_Fer PTKc_FGFR4 PTKc_DDR_like PTKc_EphR_B PTKc_c-ros PTKc_Met_Ron PTKc_TrkA PTKc_FGFR3 PTKc_FGFR2 PTKc_Jak1_rpt2 PTKc_Tie1 PTKc_Syk PTKc_DDR2 PTKc_Ror1 PTKc_Tie PTKc_Axl_like PTKc_TrkC PTKc_DDR1 PTKc_PDGFR PTKc_IGF-1R PTKc_TrkB PTK_HER3 protein|protein kinase domain containing protein, expressed",1.2960294,null,"20.2.1","stress.abiotic.heat","Os03g0648400","Transcript","highly similar to ( 550) AT3G44110 | Symbols: ATJ3, ATJ | ATJ3; protein binding | chr3:15869179-15871059 REVERSEhighly similar to ( 586) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ_CXXCXGXG DnaJ DnaJ PRK10266 protein|chaperone protein dnaJ, putative, expressed",-1.0908371]
[{"$nulls":8},"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0130900","Transcript","moderately similar to ( 427) AT1G20650 | Symbols: | ATP binding / protein kinase/ protein serine/threonine kinase | chr1:7158422-7160022 REVERSEmoderately similar to ( 224) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) PTKc Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Ror PTKc_EGFR_like PTKc_InsR_like PTKc_Trk PTKc_Chk PTKc_Frk_like PTKc_TrkA PTKc_EphR PTKc_Fes_like PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Ack_like PTKc_Abl PTKc_c-ros PTKc_Axl_like SPS1 PTKc_DDR PTKc_Csk PTKc_Itk PTKc_RET PTKc_Fyn_Yrk PTKc_TrkB PTKc_DDR_like PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Syk_like PTKc_Musk PTK_CCK4 PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Yes PTKc_Lyn PTKc_Ror1 PTKc_Met_Ron PTKc_EphR_A2 PTK_HER3 PTKc_ALK_LTK PTKc_DDR2 PTKc_Src PTKc_Aatyk PTKc_Jak1_rpt2 PTKc_DDR1 PTKc_IGF-1R PTKc_FGFR PTKc_Axl PTKc_Fer PTKc_Hck PTKc_InsR PTKc_EphR_B PTK_Ryk PTKc_Ror2 PTKc_HER2 PTKc_FAK PTKc_PDGFR PTKc_EphR_A PTKc_Fes PTKc_Tie1 PTKc_Tyro3 protein|protein kinase, putative, expressed",2.371442,null,"20.2.1","stress.abiotic.heat","Os01g0239100","Transcript","moderately similar to ( 373) AT2G20560 | Symbols: | DNAJ heat shock family protein | chr2:8848353-8849815 REVERSEvery weakly similar to (94.7) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ PRK10266 CbpA protein|dnaJ domain containing protein, expressed",-1.1356636]
[null,19.1,"tetrapyrrole synthesis.glu-tRNA synthetase","Os11g0544800","Transcript","highly similar to ( 798) AT1G48520 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase | chr1:17940185-17942540 FORWARD gatB GatB GatB_N GatB_Yqey PRK04028 GatE GatB protein|aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed",2.1625051,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0598900","Transcript","moderately similar to ( 471) AT1G21240 | Symbols: WAK3 | WAK3 (wall associated kinase 3); kinase/ protein serine/threonine kinase | chr1:7434303-7436702 FORWARDweakly similar to ( 200) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Met_Ron PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Csk_like PTKc_Frk_like PTKc_Srm_Brk PTKc_Abl PTKc_Trk PTKc_EGFR_like PTKc_Axl_like PTKc_EphR PTKc_Fer PTKc_Fes_like PTKc_EphR_A2 PTKc_Axl PTKc_Itk PTKc_Syk_like PTKc_EphR_B PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Fyn_Yrk PTKc_Lyn PTKc_FAK PTKc_Tec_like PTKc_TrkA PTKc_EphR_A PTK_CCK4 PTKc_Yes PTKc_Tec_Rlk PTKc_Ack_like PTKc_Musk PTKc_Tyro3 PTKc_Btk_Bmx PTKc_Lck_Blk PTKc_RET PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Fes PTKc_Hck PTKc_Ror PTKc_c-ros PTKc_TrkB PTKc_Tie2 PTKc_Csk PTKc_HER4 PTKc_Tyk2_rpt2 PTKc_DDR_like PTK_HER3 PTKc_PDGFR PTKc_IGF-1R PTKc_DDR2 PTKc_EGFR PTKc_TrkC PTKc_FGFR PTKc_Tie1 protein|OsWAK50 - OsWAK receptor-like protein kinase, expressed",-1.7638403,null,"20.2.1","stress.abiotic.heat","Os09g0482100","Transcript","nearly identical (1062) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1157) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2360722]
[null,19.1,"tetrapyrrole synthesis.glu-tRNA synthetase","Os04g0643200","Transcript","moderately similar to ( 438) AT3G25660 | Symbols: | glutamyl-tRNA(Gln) amidotransferase, putative | chr3:9339640-9342044 REVERSE gatA GatA Amidase PRK07235 PRK07139 PRK09201 PRK07488 PRK06169 PRK07486 PRK07056 PRK08186 PRK07487 PRK08137 PRK06061 PRK06170 PRK06828 PRK07042 PRK12470 PRK06102 PRK05962 PRK06707 PRK08310 PRK07869 PRK06529 PRK11910 PRK06565 protein|amidase, putative, expressed",1.5039047,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0170400","Transcript","highly similar to ( 562) AT2G02800 | Symbols: APK2B | APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr2:796889-799250 REVERSEmoderately similar to ( 232) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc Pkinase S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Syk_like PTKc_Jak2_Jak3_rpt2 PTKc_Srm_Brk PTKc_Fes_like PTKc_EphR PTKc_Ror PTKc_Src_like PTKc_Trk PTKc_InsR_like PTKc_Abl PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_Tec_like PTKc_TrkC SPS1 PTKc_DDR PTKc_Frk_like PTKc_Chk PTKc_EphR_A2 PTKc_Csk PTKc_RET PTKc_Axl_like PTKc_c-ros PTKc_Btk_Bmx PTKc_TrkA PTKc_TrkB PTKc_Itk PTKc_Musk PTKc_Fer PTK_HER3 PTKc_DDR1 PTKc_EphR_B PTKc_Lck_Blk PTKc_ALK_LTK PTKc_FGFR PTKc_Tec_Rlk PTK_CCK4 PTKc_FAK PTKc_Ror1 PTKc_Met_Ron PTKc_Lyn PTKc_Tie2 PTKc_Tie1 PTKc_PDGFR PTKc_Tyro3 PTKc_DDR2 PTKc_DDR_like PTKc_Src PTKc_Tie PTKc_EphR_A PTKc_Yes PTKc_Fyn_Yrk PTKc_EphR_A10 PTKc_Hck PTKc_Syk PTKc_HER2 PTKc_HER4 PTKc_Fes PTKc_EGFR protein|protein kinase domain containing protein, expressed",0.98200226,null,"20.2.1","stress.abiotic.heat","Os06g0716700","Transcript","nearly identical (1050) AT4G24190 | Symbols: SHD | SHD (SHEPHERD); ATP binding / unfolded protein binding | chr4:12551902-12555851 REVERSEnearly identical (1162) ENPL_HORVU Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2462469]
[null,19.3,"tetrapyrrole synthesis.GSA","Os03g0643300","Transcript","highly similar to ( 673) AT5G46180 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid transaminase | chr5:18718766-18721271 REVERSEweakly similar to ( 121) GSA_HORVU Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Hordeum vulgare (Barley) rocD ArgD rocD Aminotran_3 GabT PRK03711 PRK02627 BioA argD argD argD PRK07323 PRK05769 PRK08117 argD PRK11522 PRK08555 argD PRK12381 PRK08593 PRK07495 PRK06918 argD PRK04260 argD PRK06062 PRK09264 HemL PRK09221 PRK06917 PRK07481 PRK06938 PRK06058 PRK07483 PRK08360 PRK05639 PRK07678 PRK08088 PRK06541 PRK06931 PRK06916 PRK06777 PRK09792 PRK06105 PRK09044 PRK07480 PRK06148 PRK06082 PRK08466 PRK00062 PRK07986 PRK05964 PRK08297 PRK07482 PRK06173 PRK07036 PRK07030 PRK05965 PRK12403 PRK00615 PRK12389 PRK07894 PRK06943 PRK08742 PRK06149 PRK06942 PRK05630 PRK06209 PRK07046 protein|aminotransferase, putative, expressed",-1.3771795,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0490500","Transcript","moderately similar to ( 263) AT3G59350 | Symbols: | serine/threonine protein kinase, putative | chr3:21932930-21934883 FORWARDweakly similar to ( 146) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc S_TKc Pkinase S_TKc protein|STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed",-1.5664234,null,"20.2.1","stress.abiotic.heat","Os01g0840100","Transcript","nearly identical (1024) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEnearly identical (1038) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.5626196]
[null,19.3,"tetrapyrrole synthesis.GSA","Os08g0532200","Transcript","highly similar to ( 715) AT5G63570 | Symbols: GSA1 | GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE); glutamate-1-semialdehyde 2,1-aminomutase | chr5:25451957-25453620 FORWARDhighly similar to ( 845) GSA_ORYSA Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) PRK00062 HemL PRK12389 PRK06942 PRK00615 PRK06209 Aminotran_3 ArgD GabT PRK07046 argD BioA PRK08117 argD argD PRK05769 PRK07323 PRK08555 argD PRK08593 PRK12381 PRK07495 PRK08088 PRK04260 PRK03711 PRK02627 argD PRK06062 PRK08360 PRK06918 PRK11522 PRK06777 argD PRK09221 PRK06931 argD PRK06938 PRK06058 rocD PRK09792 PRK09264 PRK06541 PRK09044 PRK07483 rocD PRK06173 PRK06149 PRK06148 PRK07481 PRK07986 PRK06916 PRK07678 PRK07894 PRK08466 PRK06917 PRK05639 PRK05965 PRK07036 PRK06943 PRK07030 PRK08742 protein|aminotransferase, putative, expressed",1.8685623,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0960400","Transcript","highly similar to ( 944) AT1G06840 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:2097854-2103479 REVERSEmoderately similar to ( 243) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Src_like PTKc_Frk_like PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Srm_Brk PTKc_Tec_like PTKc_Abl PTKc_Fes_like PTKc_Src PTKc_Musk PTKc_EphR PTKc_c-ros PTKc_Ror PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_TrkB PTKc_EphR_A2 PTKc_Itk PTKc_Syk_like PTKc_Fer PTKc_Fyn_Yrk PTKc_RET PTKc_Ack_like SPS1 PTKc_Yes PTKc_Chk PTKc_InsR_like PTKc_Btk_Bmx PTKc_EGFR_like PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_TrkC PTKc_TrkA PTKc_Csk PTKc_Tec_Rlk PTKc_Jak1_rpt2 PTKc_FAK PTKc_Lyn PTKc_FGFR PTKc_EphR_A PTKc_ALK_LTK PTKc_DDR PTKc_Tie2 PTKc_Axl_like PTK_CCK4 PTKc_Hck PTKc_Ror1 PTKc_HER2 PTKc_Fes PTKc_Tie1 PTKc_Zap-70 PTKc_FGFR4 PTKc_Tie PTKc_DDR2 PTKc_HER4 PTK_HER3 PTKc_DDR1 PTKc_InsR PTKc_IGF-1R PTKc_FGFR3 PTKc_Tyro3 protein|expressed protein",-1.4444429,null,"20.2.1","stress.abiotic.heat","Os08g0452900","Transcript","very weakly similar to (85.9) AT3G14200 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr3:4712881-4714361 REVERSEDnaJ protein|heat shock protein DnaJ, putative, expressed",-1.6592275]
[null,19.4,"tetrapyrrole synthesis.ALA dehydratase","Os06g0704600","Transcript","moderately similar to ( 414) AT1G69740 | Symbols: HEMB1 | HEMB1; catalytic/ metal ion binding / porphobilinogen synthase | chr1:26232197-26234713 FORWARDhighly similar to ( 532) HEM2_HORVU Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) - Hordeum vulgare (Barley) PRK09283 ALAD HemB protein|delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed",1.337017,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0310800","Transcript","moderately similar to ( 262) AT3G62220 | Symbols: | serine/threonine protein kinase, putative | chr3:23029276-23030864 REVERSEweakly similar to ( 135) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr S_TKc S_TKc Pkinase PTKc PTKc_Jak_rpt2 PTKc_Src_like PTKc_Fyn_Yrk PTKc_Src PTKc_Trk PTKc_Yes PTKc_Frk_like PTKc_Csk_like PTKc_Fes_like PTK_CCK4 PTKc_Srm_Brk PTKc_Ack_like PTKc_Lyn PTKc_Ror SPS1 PTKc_InsR_like PTKc_Syk_like PTKc_TrkB PTKc_Hck PTKc_EGFR_like PTKc_Lck_Blk protein|OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed",-1.0326945,null,"20.2.1","stress.abiotic.heat","Os03g0113700","Transcript","highly similar to ( 956) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 988) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.2001644]
[null,19.7,"tetrapyrrole synthesis.uroporphyrinogen decarboxylase","Os03g0337600","Transcript","highly similar to ( 600) AT2G40490 | Symbols: HEME2 | HEME2; uroporphyrinogen decarboxylase | chr2:16912961-16914988 FORWARDhighly similar to ( 659) DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Zea mays (Maize) hemE URO-D URO-D HemE URO-D_like Mta_CmuA_like URO-D_CIMS_like PRK06252 protein|uroporphyrinogen decarboxylase, putative, expressed",2.157176,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0353500","Transcript","moderately similar to ( 334) AT4G18640 | Symbols: MRH1 | MRH1 (morphogenesis of root hair 1); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:10260481-10263577 FORWARDweakly similar to ( 107) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) PTKc Pkinase_Tyr TyrKc protein|MRH1, putative, expressed",3.9484806,null,"20.2.1","stress.abiotic.heat","Os03g0261500","Transcript","moderately similar to ( 215) AT5G22080 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7310600-7313540 REVERSE protein|heat shock protein DnaJ, putative, expressed",3.2925575]
[null,19.7,"tetrapyrrole synthesis.uroporphyrinogen decarboxylase","Os01g0622300","Transcript","highly similar to ( 546) AT3G14930 | Symbols: HEME1 | HEME1; uroporphyrinogen decarboxylase | chr3:5021290-5022577 FORWARDmoderately similar to ( 389) DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) URO-D hemE URO-D HemE URO-D_like URO-D_CIMS_like Mta_CmuA_like PRK06252 protein|uroporphyrinogen decarboxylase, putative, expressed",1.6455685,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os11g0667700","Transcript","moderately similar to ( 242) AT3G55950 | Symbols: CCR3, ATCRR3 | CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase | chr3:20753903-20756347 REVERSEmoderately similar to ( 201) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc S_TKc Pkinase_Tyr Pkinase PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Trk PTKc_Fes_like PTKc_Csk_like PTKc_EphR_A2 PTKc_FAK protein|protein kinase domain containing protein, expressed",-1.307413,null,"20.2.1","stress.abiotic.heat","Os06g0474800","Transcript","very weakly similar to (87.8) AT5G23240 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826857-7828534 REVERSE protein|expressed protein",-1.9624877]
[null,19.1,"tetrapyrrole synthesis.magnesium chelatase","Os03g0563300","Transcript","highly similar to ( 545) AT5G45930 | Symbols: CHLI2, CHL I2, CHLI-2 | CHLI2 (MAGNESIUM CHELATASE I2); ATPase/ magnesium chelatase | chr5:18628095-18629565 FORWARDhighly similar to ( 563) CHLI_SOYBN Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Glycine max (Soybean)chlI ChlI protein|magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed",3.0603971,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0533600","Transcript","moderately similar to ( 393) AT5G47070 | Symbols: | protein kinase, putative | chr5:19118683-19120528 REVERSEmoderately similar to ( 204) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc Pkinase PTKc S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Syk_like PTKc_Csk_like PTKc_Tyk2_rpt2 PTKc_DDR PTKc_EphR SPS1 PTKc_EGFR_like PTKc_Fes_like PTKc_InsR_like PTKc_Ack_like PTKc_Src_like PTKc_Lck_Blk PTKc_Trk PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Tec_like PTKc_Frk_like PTKc_c-ros PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Musk PTKc_DDR2 PTKc_Csk PTKc_Axl_like PTKc_Chk PTKc_Abl PTK_CCK4 PTKc_Jak1_rpt2 PTK_HER3 PTKc_TrkC PTKc_TrkA PTKc_Btk_Bmx PTKc_DDR1 PTKc_DDR_like PTKc_Fer PTKc_Met_Ron PTKc_Fes PTKc_TrkB PTKc_EphR_A2 PTKc_InsR PTKc_FGFR PTKc_ALK_LTK PTKc_Tec_Rlk PTKc_EphR_B PTKc_FAK PTKc_Tie1 PTKc_IGF-1R PTKc_PDGFR PTKc_HER4 PTKc_EphR_A PTKc_EphR_A10 PTKc_Tie2 PTKc_Src PTKc_Fyn_Yrk PTKc_Tie PTKc_RET PTKc_Yes protein|tyrosine protein kinase domain containing protein, putative, expressed",-1.25211,null,"20.2.1","stress.abiotic.heat","Os02g0656500","Transcript","moderately similar to ( 461) AT5G22060 | Symbols: ATJ2, J2 | ATJ2; protein binding | chr5:7303798-7305668 REVERSEmoderately similar to ( 476) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ_CXXCXGXG DnaJ protein|chaperone protein dnaJ, putative, expressed",-1.1058906]
[null,19.1,"tetrapyrrole synthesis.magnesium chelatase","Os07g0656500","Transcript","nearly identical (1219) AT5G13630 | Symbols: GUN5, CCH, CHLH, CCH1 | GUN5 (GENOMES UNCOUPLED 5); magnesium chelatase | chr5:4387920-4392082 REVERSEPRK12493 CobN-Mg_chel CobN cobN cobN protein|magnesium-chelatase, putative, expressed",2.9338992,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0693200","Transcript","moderately similar to ( 408) AT2G18890 | Symbols: | protein kinase family protein | chr2:8184027-8185673 FORWARDmoderately similar to ( 201) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) PTKc Pkinase_Tyr S_TKc TyrKc S_TKc Pkinase SPS1 PTKc_Csk_like PTKc_EGFR_like PTKc_Chk PTKc_Src_like PTKc_FGFR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Ack_like PTKc_Fes_like PTKc_c-ros PTKc_Tec_like PTKc_EphR PTKc_Frk_like PTKc_FAK PTKc_ALK_LTK PTKc_Abl PTKc_Lck_Blk PTKc_EGFR PTKc_Syk_like PTKc_Fer PTKc_Axl_like protein|protein kinase domain containing protein, expressed",2.631947,null,"20.2.1","stress.abiotic.heat","Os02g0782500","Transcript","very weakly similar to ( 100) AT1G54050 | Symbols: | 17.4 kDa class III heat shock protein (HSP17.4-CIII) | chr1:20179558-20180122 REVERSEvery weakly similar to (83.2) HSP21_IPONI 17.2 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) IbpA HSP20 alpha-crystallin-Hsps protein|hsp20/alpha crystallin family protein, putative, expressed",-2.0676515]
[null,19.11,"tetrapyrrole synthesis.magnesium protoporphyrin IX methyltransferase","Os06g0132400","Transcript","moderately similar to ( 300) AT4G25080 | Symbols: CHLM | CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | chr4:12877216-12878128 FORWARD PRK07580 Mg-por_mtran_C UbiG protein|magnesium-protoporphyrin O-methyltransferase, putative, expressed",3.1289246,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0631700","Transcript","highly similar to ( 574) AT3G59110 | Symbols: | protein kinase family protein | chr3:21855673-21857847 FORWARDmoderately similar to ( 221) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Itk PTKc_Tec_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_EGFR_like PTKc_Syk_like PTKc_Fes_like PTKc_InsR_like PTKc_Ror PTKc_Trk PTKc_EphR_A2 PTKc_Chk PTKc_Ack_like PTKc_Tec_Rlk PTKc_EphR_B PTKc_ALK_LTK PTKc_c-ros PTKc_EphR_A PTKc_Csk PTK_CCK4 PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Lck_Blk PTKc_Met_Ron PTKc_Syk PTKc_Src PTKc_Zap-70 PTKc_Ror1 PTKc_Btk_Bmx PTKc_Fes PTKc_TrkC PTKc_TrkA PTKc_TrkB PTKc_Fyn_Yrk PTK_HER3 PTKc_FGFR PTKc_DDR PTKc_Lyn PTK_Ryk PTKc_Yes PTKc_RET PTKc_Tie2 PTKc_HER4 PTKc_PDGFR PTKc_FAK protein|serine/threonine-protein kinase, putative, expressed",1.8202939,null,"20.2.1","stress.abiotic.heat","Os03g0159900","Transcript","very weakly similar to (85.1) AT3G22530 | Symbols: | unknown protein | chr3:7977774-7978370 REVERSE protein|expressed protein",1.0589358]
[null,19.12,"tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase","Os01g0279100","Transcript","moderately similar to ( 486) AT3G56940 | Symbols: CRD1, CHL27, ACSF | CRD1 (COPPER RESPONSE DEFECT 1); DNA binding / magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase | chr3:21076594-21078269 FORWARDhighly similar to ( 519) CRD1_HORVU Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) - Hordeum vulgare (Barley)ACSF Rubrerythrin protein|magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed",4.379773,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0664200","Transcript","highly similar to ( 556) AT2G42960 | Symbols: | protein kinase family protein | chr2:17868597-17870630 REVERSEmoderately similar to ( 247) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc S_TKc Pkinase_Tyr Pkinase S_TKc PTKc PTKc_Srm_Brk PTKc_Csk_like PTKc_Jak_rpt2 SPS1 PTKc_Fes_like PTKc_Src_like PTKc_Syk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Trk PTKc_InsR_like PTKc_EphR PTKc_Ror PTKc_Chk PTKc_Itk PTKc_Tec_like PTKc_EphR_A2 PTK_CCK4 PTKc_ALK_LTK PTKc_Jak2_Jak3_rpt2 PTKc_Fes PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Fer PTKc_c-ros PTKc_Lck_Blk PTKc_EphR_A PTKc_DDR PTKc_TrkA PTKc_FGFR PTKc_Src PTKc_TrkC PTKc_Ack_like PTKc_Csk PTKc_Abl PTKc_Zap-70 PTKc_PDGFR PTKc_Syk PTKc_Axl_like PTKc_Tec_Rlk PTKc_RET PTKc_Lyn PTKc_TrkB PTKc_Fyn_Yrk PTKc_FAK PTKc_DDR_like PTKc_Btk_Bmx PTKc_Musk PTKc_Met_Ron PTKc_Jak1_rpt2 PTKc_FGFR2 PTK_Ryk PTK_HER3 PTKc_HER4 PTKc_Ror1 protein|serine/threonine-protein kinase, putative, expressed",3.8064172,null,"20.2.2","stress.abiotic.cold","Os05g0566800","Transcript","weakly similar to ( 154) AT1G29395 | Symbols: COR414-TM1 | COR414-TM1 | chr1:10288345-10289539 REVERSEWCOR413 protein|cold acclimation protein WCOR413, putative, expressed",1.4706432]
[null,19.14,"tetrapyrrole synthesis.protochlorophyllide reductase","Os04g0678700","Transcript","moderately similar to ( 462) AT5G54190 | Symbols: PORA | PORA; oxidoreductase/ protochlorophyllide reductase | chr5:21991183-21992238 REVERSEhighly similar to ( 516) PORA_WHEAT Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) - Triticum aestivum (Wheat) PRK07453 PRK06197 PRK06196 PRK05854 FabG protein|protochlorophyllide reductase A, chloroplast precursor, putative, expressed",12.208504,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0516400","Transcript","moderately similar to ( 265) AT3G24550 | Symbols: ATPERK1 | ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | chr3:8960411-8963303 FORWARDweakly similar to ( 149) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc S_TKc Pkinase TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 protein|protein kinase, putative, expressed",1.920761,null,"20.2.3","stress.abiotic.drought/salt","Os05g0217800","Transcript","weakly similar to ( 156) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEweakly similar to ( 106) EA30_VICFA Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean)BURP protein|BURP domain containing protein, expressed",4.3420224]
[null,19.14,"tetrapyrrole synthesis.protochlorophyllide reductase","Os10g0496900","Transcript","highly similar to ( 509) AT5G54190 | Symbols: PORA | PORA; oxidoreductase/ protochlorophyllide reductase | chr5:21991183-21992238 REVERSEhighly similar to ( 534) PORB_HORVU Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) PRK07453 PRK06197 PRK06196 protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed",2.4886959,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os11g0672200","Transcript","moderately similar to ( 247) AT4G21390 | Symbols: B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding | chr4:11394458-11397474 REVERSEweakly similar to ( 171) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Chk PTKc_Frk_like PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Axl_like PTKc_EphR_B PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like PTKc_Csk PTKc_Abl PTKc_Ror1 PTKc_Fes_like PTKc_Tec_Rlk PTKc_EphR_A2 PTK_CCK4 protein|cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed",-2.140228,null,"20.2.3","stress.abiotic.drought/salt","Os01g0828300","Transcript","highly similar to ( 712) AT2G40280 | Symbols: | dehydration-responsive family protein | chr2:16825707-16828300 REVERSEDUF248 protein|methyltransferase, putative, expressed",-1.658373]
[null,19.15,"tetrapyrrole synthesis.chlorophyll synthase","Os05g0349700","Transcript","highly similar to ( 510) AT3G51820 | Symbols: ATG4, G4, CHLG | G4; chlorophyll synthetase | chr3:19216301-19218934 REVERSEPRK07566 UbiA PRK12392 UbiA protein|prenyltransferase, putative, expressed",2.0641327,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os10g0180800","Transcript","moderately similar to ( 388) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDmoderately similar to ( 201) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc S_TKc Pkinase PTKc Pkinase_Tyr SPS1 PTKc_Trk PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Ack_like PTKc_Srm_Brk PTKc_Src_like PTKc_EphR PTKc_Syk_like PTKc_Met_Ron PTKc_Tec_like PTKc_Csk_like PTKc_Frk_like PTKc_DDR PTKc_Itk PTKc_TrkA PTKc_EGFR_like PTKc_Fer PTKc_EphR_A2 PTKc_TrkB PTKc_Btk_Bmx PTKc_Axl_like PTKc_FAK PTKc_Ror PTKc_TrkC PTKc_Fes PTKc_InsR_like PTKc_EphR_A PTKc_c-ros PTKc_Tec_Rlk PTKc_Tyk2_rpt2 PTKc_RET PTKc_Lyn PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_EphR_B PTKc_Syk PTKc_Chk PTKc_Lck_Blk PTKc_FGFR PTK_CCK4 PTKc_DDR_like PTKc_DDR2 PTKc_Csk PTKc_ALK_LTK PTKc_Ror1 PTKc_Src PTKc_PDGFR PTKc_Zap-70 PTKc_DDR1 PTKc_Yes PTKc_HER4 PTKc_Musk protein|OsWAK112d - OsWAK receptor-like protein kinase, expressed",-2.148242,null,"20.2.3","stress.abiotic.drought/salt","Os05g0215000","Transcript","weakly similar to ( 115) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",5.4819794]
[null,19.21,"tetrapyrrole synthesis.heme oxygenase","Os03g0395000","Transcript","moderately similar to ( 211) AT2G26550 | Symbols: HO2 | HO2 (HEME OXYGENASE 2); heme oxygenase (decyclizing) | chr2:11291584-11293426 REVERSE HemeO protein|heme oxygenase 2, putative, expressed",2.5141485,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0685900","Transcript","highly similar to ( 766) AT1G66150 | Symbols: TMK1 | TMK1 (TRANSMEMBRANE KINASE 1); transmembrane receptor protein serine/threonine kinase | chr1:24631503-24634415 FORWARDmoderately similar to ( 245) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Csk_like PTKc_Tec_like PTKc_EphR PTKc_Fyn_Yrk PTKc_Fes_like PTKc_Itk PTKc_Srm_Brk PTKc_Frk_like PTKc_Src PTKc_Axl_like PTKc_Yes SPS1 PTKc_TrkA PTKc_Ror PTKc_Csk PTKc_InsR_like PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_DDR PTKc_Abl PTKc_Met_Ron PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_A2 PTKc_Btk_Bmx PTKc_Fer PTKc_DDR_like PTKc_Lyn PTK_CCK4 PTKc_ALK_LTK PTKc_Musk PTKc_Tyro3 PTKc_Syk_like PTKc_Tie2 PTKc_FGFR PTKc_Ror1 PTKc_Jak1_rpt2 PTKc_DDR2 PTKc_Axl PTKc_DDR1 PTKc_IGF-1R PTKc_Fes PTKc_c-ros PTKc_Hck PTKc_EGFR_like PTKc_EphR_A PTKc_EphR_B PTKc_InsR PTKc_FGFR4 PTKc_Tie1 PTKc_RET PTKc_Aatyk PTKc_FGFR3 PTK_Ryk PTKc_FGFR1 PTKc_FGFR2 PTKc_PDGFR PTKc_Tie PTKc_EphR_A10 PTK_HER3 protein|receptor protein kinase TMK1 precursor, putative, expressed",2.0713534,null,"20.2.3","stress.abiotic.drought/salt","Os03g0673800","Transcript","highly similar to ( 509) AT1G58520 | Symbols: RXW8 | hydrolase, acting on ester bonds / lipase | chr1:21729913-21731344 FORWARD DUF221 COG5594 protein|RXW8, putative, expressed",2.217145]
[null,19.32,"tetrapyrrole synthesis.sirohydrochlorin ferrochelatase","Os02g0296800","Transcript","moderately similar to ( 230) AT1G50170 | Symbols: ATSIRB | ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B); sirohydrochlorin ferrochelatase | chr1:18582087-18583514 FORWARDCbiX CbiX_SirB_N COG2138 PRK00923 CbiX_SirB_C protein|sirohydrochlorin ferrochelatase, putative, expressed",1.9466571,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0808100","Transcript","moderately similar to ( 459) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 203) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Csk_like PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_Syk_like PTKc_Met_Ron PTKc_EGFR_like PTKc_Srm_Brk PTKc_Ror PTKc_Fer PTKc_Tyk2_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Axl_like PTKc_Frk_like PTKc_Abl PTKc_TrkB PTKc_Fes PTKc_TrkA PTKc_InsR_like PTKc_Btk_Bmx PTKc_EphR PTKc_TrkC PTKc_Itk PTKc_EphR_A2 PTKc_Chk PTKc_Tec_like PTKc_FAK PTKc_Lck_Blk PTKc_Tyro3 PTK_CCK4 PTKc_Ror1 PTKc_Zap-70 PTKc_RET PTKc_Musk PTKc_c-ros PTKc_Tec_Rlk PTKc_HER4 PTKc_Ack_like PTKc_EphR_A PTKc_EphR_B PTKc_Yes PTKc_Fyn_Yrk PTKc_Src PTKc_Ror2 PTKc_IGF-1R PTKc_Csk protein|OsWAK22 - OsWAK receptor-like protein kinase, expressed",1.4700646,null,"20.2.3","stress.abiotic.drought/salt","Os03g0345300","Transcript","moderately similar to ( 305) AT3G62730 | Symbols: | unknown protein | chr3:23208003-23209436 REVERSE protein|desiccation-related protein PCC13-62 precursor, putative, expressed",1.5497125]
[null,19.4,"tetrapyrrole synthesis.regulation","Os01g0510600","Transcript","moderately similar to ( 310) AT3G14110 | Symbols: FLU | FLU (FLUORESCENT IN BLUE LIGHT); binding | chr3:4676222-4677602 REVERSE protein|tetratricopeptide repeat containing protein, putative, expressed",1.9929127,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0286300","Transcript","moderately similar to ( 377) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDweakly similar to ( 191) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Ack_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Srm_Brk PTKc_Met_Ron PTKc_Tec_like PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_Fer PTKc_Frk_like PTKc_EphR PTKc_Syk_like PTKc_Itk PTKc_Fes PTKc_Tec_Rlk PTKc_InsR_like PTKc_EGFR_like PTKc_Lck_Blk PTKc_Abl PTKc_Btk_Bmx PTKc_c-ros PTKc_Src PTKc_Ror PTKc_DDR PTKc_FAK PTKc_ALK_LTK PTKc_Chk PTKc_Axl_like PTKc_Fyn_Yrk PTKc_Lyn PTKc_TrkA PTK_CCK4 PTKc_EphR_A2 PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Yes PTKc_DDR_like PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_Musk PTKc_PDGFR protein|OsWAK33 - OsWAK receptor-like protein OsWAK-RLP, expressed",-2.0525486,null,"20.2.3","stress.abiotic.drought/salt","Os01g0233000","Transcript","weakly similar to ( 139) SRS1_ORYSA Salt-stress root protein RS1 - Oryza sativa (Rice) protein|salt stress root protein RS1, putative, expressed",1.3461937]
[null,19.4,"tetrapyrrole synthesis.regulation","Os11g0267000","Transcript","moderately similar to ( 209) AT3G59400 | Symbols: GUN4 | GUN4; enzyme binding / tetrapyrrole binding | chr3:21948881-21949678 REVERSEGUN4 protein|uncharacterized protein ycf53, putative, expressed",4.978439,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613,null,"20.2.3","stress.abiotic.drought/salt","Os02g0675700","Transcript","highly similar to ( 773) AT4G00750 | Symbols: | dehydration-responsive family protein | chr4:314405-317507 FORWARDDUF248 protein|dehydration response related protein, putative, expressed",3.8019972]
[null,19.99,"tetrapyrrole synthesis.unspecified","Os01g0733600","Transcript","highly similar to ( 801) AT3G02280 | Symbols: | flavodoxin family protein | chr3:453646-457659 FORWARDmoderately similar to ( 249) NCPR_PHAAU NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) CysJ cysJ PRK06214 FAD_binding_1 Flavodoxin_1 protein|NADPH reductase, putative, expressed",-1.1077743,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0182600","Transcript","moderately similar to ( 446) AT2G25220 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr2:10742918-10745540 REVERSEweakly similar to ( 195) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc Pkinase_Tyr Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_Tec_like PTKc_Csk_like SPS1 PTKc_Src_like PTKc_c-ros PTKc_Trk PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR PTKc_ALK_LTK PTKc_Ror PTKc_DDR PTKc_Tec_Rlk PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_Itk PTKc_InsR_like PTK_CCK4 PTKc_Chk PTKc_EGFR_like PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_A2 PTKc_Abl PTKc_Lck_Blk PTKc_Fer PTKc_Ack_like PTKc_Fyn_Yrk PTKc_Syk_like PTKc_Lyn PTKc_Src PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Axl_like PTKc_TrkA PTKc_Fes PTKc_TrkB PTKc_Jak1_rpt2 PTKc_FGFR4 PTKc_DDR_like PTKc_TrkC PTKc_Yes PTK_HER3 PTKc_IGF-1R PTKc_Hck PTKc_Tyk2_rpt2 PTKc_DDR1 PTKc_EphR_A PTKc_Tyro3 PTKc_EphR_B PTKc_DDR2 PTKc_Syk PTKc_Tie1 PTKc_Ror1 protein|protein kinase family protein, putative, expressed",2.863436,null,"20.2.3","stress.abiotic.drought/salt","Os06g0687450","Transcript","highly similar to ( 831) AT5G14430 | Symbols: | dehydration-responsive protein-related | chr5:4653092-4655741 FORWARDDUF248 protein|methyltransferase, putative, expressed",1.2349845]
[null,19.99,"tetrapyrrole synthesis.unspecified","Os01g0210500","Transcript","weakly similar to ( 188) AT1G17100 | Symbols: | SOUL heme-binding family protein | chr1:5844766-5845539 FORWARDSOUL protein|SOUL heme-binding protein, putative, expressed",1.6222515,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0319700","Transcript","moderately similar to ( 416) AT2G25220 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr2:10742918-10745540 REVERSEmoderately similar to ( 202) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_c-ros PTKc_Src_like PTKc_Tec_like PTKc_Fes_like PTKc_EphR SPS1 PTKc_Trk PTKc_FGFR PTKc_DDR PTKc_Ror PTKc_Chk PTKc_Tec_Rlk PTKc_Tie2 PTKc_EGFR_like PTKc_InsR_like PTKc_Musk PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_ALK_LTK PTKc_Itk PTKc_Syk_like PTKc_FGFR4 PTKc_Fes PTKc_Btk_Bmx PTKc_Lck_Blk PTKc_Csk PTKc_Tie1 PTKc_EphR_A2 PTK_CCK4 PTKc_FGFR3 PTKc_Jak1_rpt2 PTKc_Fer PTKc_FAK PTKc_Tie PTKc_Ror1 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_PDGFR PTKc_Tyro3 PTKc_Lyn PTKc_FGFR2 PTKc_Ack_like PTKc_EphR_B PTKc_Src PTKc_Hck PTKc_FGFR1 PTKc_DDR_like PTKc_TrkC PTKc_Met_Ron PTKc_Axl_like PTKc_DDR1 PTKc_IGF-1R PTKc_Yes PTKc_Syk PTKc_EphR_A PTKc_RET PTKc_DDR2 PTK_HER3 PTKc_EGFR PTKc_TrkB PTKc_TrkA PTKc_HER4 PTKc_HER2 PTK_Ryk PTKc_InsR PTKc_Zap-70 PTKc_Aatyk protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",2.3925202,null,"20.2.3","stress.abiotic.drought/salt","Os05g0107900","Transcript","Di19 protein|drought induced 19 protein, putative, expressed",-1.3337746]
[{"$nulls":8},"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0637800","Transcript","nearly identical (1082) AT3G59420 | Symbols: ACR4 | ACR4 (ARABIDOPSIS CRINKLY4); kinase/ transmembrane receptor protein kinase | chr3:21959871-21962558 REVERSEnearly identical (1561) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc PTKc Pkinase S_TKc Pkinase_Tyr TyrKc PTKc_Jak_rpt2 PTKc_Csk_like SPS1 PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_Srm_Brk PTKc_Frk_like PTK_CCK4 PTKc_EGFR_like PTKc_Syk_like PTKc_Musk PTKc_Ror PTKc_Itk PTKc_TrkB PTKc_Abl PTKc_Tec_like PTKc_InsR_like PTKc_FGFR PTKc_Csk PTKc_EphR PTKc_Chk PTKc_TrkC PTKc_TrkA PTKc_Met_Ron PTK_HER3 PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Tec_Rlk PTKc_Zap-70 PTKc_Axl PTKc_PDGFR PTKc_Axl_like PTKc_HER4 PTKc_Fes PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_IGF-1R PTKc_FAK PTKc_FGFR1 PTKc_Lyn PTKc_Tie PTK_Ryk PTKc_InsR PTKc_Lck_Blk PTKc_FGFR2 PTKc_RET PTKc_FGFR3 PTKc_FGFR4 PTKc_Src PTKc_Jak1_rpt2 PTKc_EGFR PTKc_Btk_Bmx PTKc_Ror1 PTKc_EphR_A2 PTKc_Tyro3 PTKc_Ack_like PTKc_DDR2 PTKc_HER2 protein|TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed",3.504902,null,"20.2.3","stress.abiotic.drought/salt","Os06g0240050","Transcript","weakly similar to ( 120) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",1.3349804]
[null,20,"stress","Os04g0639200","Transcript","weakly similar to ( 139) AT2G21970 | Symbols: SEP2 | SEP2 (STRESS ENHANCED PROTEIN 2); chlorophyll binding | chr2:9357188-9357874 REVERSE protein|expressed protein",-1.617464,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0471000","Transcript","moderately similar to ( 390) AT5G45840 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:18594080-18597221 REVERSEvery weakly similar to (99.0) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc protein|expressed protein",-1.1398734,null,"20.2.4","stress.abiotic.touch/wounding","Os03g0299600","Transcript","very weakly similar to (83.6) AT3G10985 | Symbols: SAG20, WI12, ATWI-12 | SAG20 (SENESCENCE ASSOCIATED GENE 20) | chr3:3442776-3443108 FORWARDvery weakly similar to (85.1) WUN1_SOLTU Wound-induced protein 1 - Solanum tuberosum (Potato)WI12 protein|wound-induced protein WI12, putative, expressed",1.8004555]
[null,20,"stress","Os04g0538000","Transcript","highly similar to ( 654) AT1G62740 | Symbols: | stress-inducible protein, putative | chr1:23231026-23233380 FORWARDhighly similar to ( 540) STIP_SOYBN Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) TPR protein|heat shock protein STI, putative, expressed",-1.9123079,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0127300","Transcript","moderately similar to ( 495) AT3G55950 | Symbols: CCR3, ATCRR3 | CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase | chr3:20753903-20756347 REVERSEmoderately similar to ( 249) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) PTKc Pkinase S_TKc Pkinase_Tyr TyrKc S_TKc SPS1 PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like PTKc_Src_like PTKc_Trk PTKc_Itk PTKc_Ror PTKc_Fes_like PTKc_Btk_Bmx PTKc_EphR PTK_CCK4 PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Frk_like PTKc_EphR_A2 PTKc_InsR_like PTKc_Syk_like PTKc_Axl_like PTKc_TrkA PTKc_Tec_Rlk PTKc_Met_Ron PTKc_Chk PTKc_Lck_Blk PTKc_RET PTKc_Tie2 PTKc_Ack_like PTKc_Csk PTKc_EGFR_like PTKc_TrkC PTKc_Src PTKc_EphR_B PTKc_TrkB PTKc_Abl PTKc_EphR_A PTKc_FGFR PTKc_DDR PTKc_c-ros protein|TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed",-1.4382596,null,"20.2.99","stress.abiotic.unspecified","Os08g0460000","Transcript","moderately similar to ( 217) AT5G20630 | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase | chr5:6975315-6975950 REVERSEmoderately similar to ( 228) ABP20_PRUPE Auxin-binding protein ABP20 precursor - Prunus persica (Peach)Cupin_1 protein|Cupin domain containing protein, expressed",7.935741]
[null,20,"stress","Os02g0644100","Transcript","highly similar to ( 705) AT1G62740 | Symbols: | stress-inducible protein, putative | chr1:23231026-23233380 FORWARDhighly similar to ( 575) STIP_SOYBN Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) TPR protein|heat shock protein STI, putative, expressed",-1.0906506,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0110600","Transcript","moderately similar to ( 429) AT2G28250 | Symbols: NCRK | NCRK; kinase | chr2:12044004-12046339 FORWARDmoderately similar to ( 207) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Syk_like PTKc_Srm_Brk PTKc_Itk PTKc_Trk PTKc_Fes_like PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_Tec_like PTKc_Ror PTKc_Met_Ron PTKc_EphR PTKc_InsR_like PTKc_EGFR_like PTKc_Jak1_rpt2 PTKc_Yes PTKc_Fyn_Yrk PTKc_DDR PTKc_Tec_Rlk PTKc_Tyk2_rpt2 PTKc_Lck_Blk PTKc_Aatyk PTKc_Abl PTKc_Ack_like PTKc_c-ros PTKc_Fer PTKc_Fes PTKc_Ror1 PTKc_Chk PTKc_Btk_Bmx PTKc_Lyn PTKc_ALK_LTK PTKc_Src PTKc_EphR_A2 PTK_CCK4 PTKc_TrkC PTKc_PDGFR PTKc_FGFR PTKc_EphR_B PTKc_RET protein|protein kinase, putative, expressed",2.8315868,null,"20.2.99","stress.abiotic.unspecified","Os01g0249200","Transcript","moderately similar to ( 248) AT3G62020 | Symbols: GLP10 | GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | chr3:22971443-22972192 REVERSEmoderately similar to ( 255) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.9880025]
[null,20.1,"stress.biotic","Os07g0417600","Transcript","weakly similar to ( 192) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 181) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin, putative, expressed",1.7079655,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0442100","Transcript","moderately similar to ( 449) AT2G05940 | Symbols: | protein kinase, putative | chr2:2287514-2289270 REVERSEmoderately similar to ( 222) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) PTKc Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc_EphR PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Fes_like PTKc_Syk_like PTKc_c-ros PTKc_ALK_LTK PTKc_Ror PTKc_EphR_A2 SPS1 PTKc_DDR PTKc_Trk PTKc_EGFR_like PTKc_InsR_like PTKc_Chk PTKc_Src_like PTKc_Tyk2_rpt2 PTKc_Srm_Brk PTKc_Axl_like PTK_CCK4 PTKc_Ack_like PTKc_EphR_B PTKc_DDR_like PTKc_Fer PTKc_Musk PTKc_Frk_like PTKc_EphR_A PTKc_FGFR PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Abl PTKc_Itk PTKc_Tec_like PTKc_Zap-70 PTKc_Csk PTKc_RET PTKc_Ror1 PTKc_TrkC PTKc_FAK PTKc_InsR PTKc_TrkB PTKc_Met_Ron PTKc_Aatyk PTKc_Btk_Bmx PTKc_TrkA PTKc_DDR2 PTKc_Axl protein|tyrosine protein kinase domain containing protein, putative, expressed",1.4673223,null,"20.2.99","stress.abiotic.unspecified","Os01g0875300","Transcript","moderately similar to ( 203) AT1G44760 | Symbols: | universal stress protein (USP) family protein | chr1:16896894-16898427 REVERSE protein|universal stress protein domain containing protein, putative, expressed",3.2292225]
[null,20.1,"stress.biotic","Os09g0479600","Transcript","weakly similar to ( 132) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",2.4746897,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0513000","Transcript","highly similar to ( 612) AT5G13160 | Symbols: PBS1 | PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase | chr5:4176854-4179682 FORWARDmoderately similar to ( 253) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr S_TKc TyrKc S_TKc PTKc Pkinase PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Srm_Brk PTKc_EGFR_like PTKc_Src_like SPS1 PTKc_Ror PTKc_Csk_like PTKc_Trk PTKc_Frk_like PTKc_InsR_like PTKc_TrkA PTKc_Tyk2_rpt2 PTKc_Abl PTKc_Met_Ron PTKc_Fes_like PTKc_EphR PTKc_Ack_like PTKc_Lck_Blk PTKc_TrkC PTKc_Ror1 PTKc_Tec_like PTKc_Fyn_Yrk PTKc_TrkB PTKc_Chk PTKc_Jak1_rpt2 PTKc_DDR1 PTKc_Yes PTKc_Syk_like PTKc_Src PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_PDGFR PTKc_ALK_LTK PTKc_EphR_A2 PTKc_DDR_like PTKc_Itk PTKc_FGFR PTK_HER3 PTKc_Lyn PTKc_Fes PTK_CCK4 PTKc_Ror2 PTKc_HER4 PTKc_Fer PTKc_Axl_like PTKc_Tec_Rlk PTKc_RET PTKc_DDR2 PTKc_Csk PTKc_Tie1 PTKc_EphR_B PTKc_Tie PTKc_IGF-1R PTKc_Btk_Bmx PTKc_EGFR PTKc_EphR_A PTKc_Tie2 PTKc_InsR PTKc_HER2 PTKc_FAK protein|protein kinase domain containing protein, expressed",-1.302646,null,"20.2.99","stress.abiotic.unspecified","Os09g0568700","Transcript","weakly similar to ( 111) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEweakly similar to ( 115) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",-1.3166856]
[null,20.1,"stress.biotic","Os05g0141300","Transcript","moderately similar to ( 271) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEvery weakly similar to (94.4) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",0.97811747,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0654600","Transcript","moderately similar to ( 303) AT1G52540 | Symbols: | protein kinase, putative | chr1:19570298-19571884 REVERSEweakly similar to ( 190) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr PTKc S_TKc TyrKc S_TKc Pkinase PTKc_Srm_Brk PTKc_Src_like PTKc_Jak_rpt2 PTKc_Frk_like PTKc_Trk PTKc_Fes_like SPS1 PTKc_Csk_like PTKc_Src PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_TrkC PTKc_EphR PTKc_Tec_like PTKc_Fyn_Yrk PTKc_Chk PTKc_Btk_Bmx PTKc_Syk_like PTKc_Ack_like PTKc_TrkA PTKc_Yes PTKc_Lck_Blk PTKc_Ror protein|protein kinase, putative, expressed",2.8717299,null,"20.2.99","stress.abiotic.unspecified","Os01g0284500","Transcript","moderately similar to ( 241) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEmoderately similar to ( 240) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.4000788]
[null,20.1,"stress.biotic","Os01g0248300","Transcript","weakly similar to ( 199) AT1G78780 | Symbols: | pathogenesis-related family protein | chr1:29621447-29622431 REVERSEmoderately similar to ( 332) PRPX_HORVU Pathogen-related protein - Hordeum vulgare (Barley) protein|pathogen-related protein, putative, expressed",1.8871027,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os07g0686800","Transcript","moderately similar to ( 397) AT1G69790 | Symbols: | protein kinase, putative | chr1:26266838-26268818 FORWARDmoderately similar to ( 202) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_InsR_like PTKc_Trk PTKc_Srm_Brk PTKc_Ror PTKc_EGFR_like PTKc_DDR PTKc_EphR PTKc_Syk_like PTKc_Src_like SPS1 PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Musk PTKc_Tec_like PTKc_Frk_like PTKc_Chk PTKc_Csk PTKc_Fes_like PTKc_Met_Ron PTKc_DDR1 PTKc_RET PTKc_c-ros PTKc_TrkC PTKc_Jak1_rpt2 PTKc_Abl PTKc_TrkA PTKc_DDR_like PTKc_Axl_like PTKc_TrkB PTKc_FGFR PTK_CCK4 PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Itk PTKc_DDR2 PTK_HER3 PTKc_Tyro3 PTKc_IGF-1R PTKc_Fyn_Yrk PTKc_Btk_Bmx PTKc_Yes PTKc_Src PTKc_Fer PTKc_Ror1 PTKc_InsR PTKc_PDGFR PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Lyn PTKc_FAK PTKc_EphR_B PTKc_EGFR protein|tyrosine protein kinase domain containing protein, putative, expressed",2.5641897,null,"20.2.99","stress.abiotic.unspecified","Os02g0705400","Transcript","weakly similar to ( 162) AT2G21620 | Symbols: RD2 | RD2 | chr2:9248749-9249986 FORWARD protein|universal stress protein domain containing protein, putative, expressed",-1.4217519]
[null,20.1,"stress.biotic","Os11g0606200","Transcript","very weakly similar to (87.0) AT1G53350 | Symbols: | ATP binding | chr1:19903899-19907515 FORWARD NB-ARC protein|Leucine Rich Repeat family protein, expressed",2.423384,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os10g0389800","Transcript","highly similar to ( 680) AT1G53730 | Symbols: SRF6 | SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | chr1:20061771-20065475 FORWARDmoderately similar to ( 211) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc S_TKc Pkinase TyrKc PTKc PTKc_Tec_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_Srm_Brk PTKc_Tec_Rlk PTKc_Itk PTKc_Ror PTKc_EphR PTKc_Src PTKc_Met_Ron PTKc_Csk_like SPS1 PTKc_Frk_like PTKc_Ack_like PTKc_EGFR_like PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Trk PTKc_FGFR PTKc_Fes_like PTKc_Lck_Blk PTKc_Yes PTKc_Chk PTKc_Tyk2_rpt2 PTKc_Tyro3 PTKc_Axl_like PTKc_ALK_LTK PTKc_Hck PTKc_Abl PTKc_Lyn PTK_Ryk PTKc_Ror1 protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",3.1345685,null,"20.2.99","stress.abiotic.unspecified","Os08g0189200","Transcript","moderately similar to ( 230) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",5.8566914]
[null,20.1,"stress.biotic","Os06g0287700","Transcript","very weakly similar to (84.3) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|NBS-LRR disease resistance protein, putative, expressed",1.927749,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,null,"20.2.99","stress.abiotic.unspecified","Os06g0114500","Transcript","weakly similar to ( 116) AT1G01170 | Symbols: | ozone-responsive stress-related protein, putative | chr1:74105-74443 REVERSEDUF1138 protein|ATOZI1, putative, expressed",1.5791136]
[null,20.1,"stress.biotic","Os12g0438300","Transcript","very weakly similar to (92.0) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.657742,null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0741200","Transcript","highly similar to ( 635) AT1G51940 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr1:19296092-19298941 REVERSEweakly similar to ( 185) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc Pkinase S_TKc S_TKc PTKc_Csk_like PTKc_InsR_like PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Csk PTKc_Src_like PTKc_Srm_Brk SPS1 PTKc_Jak_rpt2 PTKc_Tec_like PTKc_ALK_LTK PTKc_Fes_like PTKc_c-ros PTKc_Abl PTKc_Frk_like PTKc_Tie2 PTKc_EGFR_like PTKc_Itk PTK_CCK4 PTKc_Tie1 PTKc_EphR PTKc_Ror PTKc_Btk_Bmx PTKc_Tie PTKc_FGFR PTKc_Lck_Blk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Trk PTKc_Fyn_Yrk PTKc_IGF-1R PTKc_Lyn PTKc_Fes PTKc_Met_Ron PTKc_Ack_like PTKc_Src PTKc_InsR PTKc_Yes PTKc_FAK PTKc_FGFR4 PTKc_Musk PTKc_RET PTKc_DDR PTKc_Fer PTKc_FGFR1 PTKc_Ror1 PTKc_Tyk2_rpt2 PTK_Ryk PTKc_EphR_A2 PTKc_PDGFR PTKc_EphR_A PTKc_TrkB PTKc_Hck PTKc_FGFR3 PTKc_FGFR2 PTKc_TrkA PTKc_EphR_B PTKc_TrkC PTKc_DDR_like PTKc_Axl_like PTKc_Tyro3 protein|protein kinase family protein, putative, expressed",2.9853084,null,"20.2.99","stress.abiotic.unspecified","Os08g0189300","Transcript","moderately similar to ( 226) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|cupin domain containing protein, expressed",4.864809]
[null,20.1,"stress.biotic","Os11g0701000","Transcript","weakly similar to ( 172) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 368) XIP1_ORYSA Xylanase inhibitor protein 1 precursor (Class III chitinase homolog a) (RIXI protein) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.0844676,{"$nulls":8},"20.2.99","stress.abiotic.unspecified","Os04g0465600","Transcript","weakly similar to ( 125) AT1G24020 | Symbols: MLP423 | MLP423 (MLP-LIKE PROTEIN 423) | chr1:8500653-8501458 REVERSEBet_v_I protein|pathogenesis-related Bet v I family protein, putative, expressed",4.388162]
[null,20.1,"stress.biotic","Os11g0157200","Transcript","weakly similar to ( 181) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.240785,null,29.5,"protein.degradation","Os02g0640700","Transcript","weakly similar to ( 115) AT1G14570 | Symbols: | UBX domain-containing protein | chr1:4983770-4987192 FORWARDUAS protein|expressed protein",4.648108,null,"20.2.99","stress.abiotic.unspecified","Os08g0189900","Transcript","moderately similar to ( 239) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.2424258]
[null,20.1,"stress.biotic","Os11g0214700","Transcript","protein|expressed protein",1.9574338,null,29.5,"protein.degradation","Os02g0218200","Transcript","nearly identical (1154) AT4G33090 | Symbols: APM1, ATAPM1 | APM1 (AMINOPEPTIDASE M1); aminopeptidase | chr4:15965915-15970418 REVERSE PepN Peptidase_M1 protein|puromycin-sensitive aminopeptidase, putative, expressed",-1.225317,null,"20.2.99","stress.abiotic.unspecified","Os10g0371000","Transcript","weakly similar to ( 153) AT4G08685 | Symbols: SAH7 | SAH7 | chr4:5550563-5551259 FORWARDweakly similar to ( 130) PSC13_MAIZE Pollen-specific protein C13 precursor - Zea mays (Maize)Pollen_Ole_e_I protein|POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed",3.015258]
[null,20.1,"stress.biotic","Os05g0247100","Transcript","weakly similar to ( 179) AT5G24090 | Symbols: | acidic endochitinase (CHIB1) | chr5:8143805-8145153 REVERSEmoderately similar to ( 333) XIP2_ORYSA Xylanase inhibitor protein 2 precursor (Class III chitinase homolog h) - Oryza sativa (Rice) protein|glycosyl hydrolase, putative, expressed",2.9267607,null,29.5,"protein.degradation","Os05g0110300","Transcript","moderately similar to ( 419) AT2G37660 | Symbols: | binding / catalytic/ coenzyme binding | chr2:15795481-15796977 REVERSE protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",1.4069256,null,"20.2.99","stress.abiotic.unspecified","Os02g0532500","Transcript","moderately similar to ( 222) AT3G10080 | Symbols: | germin-like protein, putative | chr3:3107476-3108159 REVERSEweakly similar to ( 147) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.1768322]
[null,20.1,"stress.biotic","Os01g0104900","Transcript","moderately similar to ( 357) AT1G27620 | Symbols: | transferase family protein | chr1:9608444-9610432 FORWARDweakly similar to ( 123) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",2.1284437,null,29.5,"protein.degradation","Os04g0537900","Transcript","highly similar to ( 625) AT1G62710 | Symbols: BETA-VPE, BETAVPE | BETA-VPE (BETA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase | chr1:23224070-23226857 REVERSEhighly similar to ( 628) VPE_RICCO Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Ricinus communis (Castor bean) Peptidase_C13 GPI8 protein|vacuolar-processing enzyme precursor, putative, expressed",0.9706742,null,"20.2.99","stress.abiotic.unspecified","Os03g0161600","Transcript","very weakly similar to (95.9) AT4G14723 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 130 Blast hits to 130 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:8440167-8440693 FORWARD protein|expressed protein",2.6363022]
[null,20.1,"stress.biotic","Os02g0612200","Transcript","protein|expressed protein",-1.4583602,null,29.5,"protein.degradation","Os03g0807100","Transcript","highly similar to ( 612) AT1G55360 | Symbols: | unknown protein | chr1:20666526-20668502 REVERSEDUF239 protein|carboxyl-terminal peptidase, putative, expressed",3.0451024,null,"20.2.99","stress.abiotic.unspecified","Os08g0190100","Transcript","moderately similar to ( 235) AT5G39110 | Symbols: | germin-like protein, putative | chr5:15657802-15658584 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-2.0081575]
[null,20.1,"stress.biotic","Os03g0709200","Transcript","weakly similar to ( 169) AT5G43470 | Symbols: RPP8, HRT, RCY1 | RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8); nucleotide binding | chr5:17463130-17466658 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",-1.0200915,null,29.5,"protein.degradation","Os12g0209000","Transcript","highly similar to ( 538) AT1G33290 | Symbols: | sporulation protein-related | chr1:12074125-12075989 FORWARDSpoIIIAA protein|uncharacterized protein ycf45, putative, expressed",1.7735147,null,"20.2.99","stress.abiotic.unspecified","Os12g0155000","Transcript","moderately similar to ( 206) AT5G38960 | Symbols: | germin-like protein, putative | chr5:15592992-15593783 FORWARDweakly similar to ( 181) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.603726]
[null,20.1,"stress.biotic","Os08g0102700","Transcript","weakly similar to ( 158) AT3G11660 | Symbols: NHL1 | NHL1 | chr3:3679031-3679660 REVERSEHin1 protein|harpin-induced protein 1 domain containing protein, expressed",2.8969364,null,29.5,"protein.degradation","Os07g0187400","Transcript","highly similar to ( 696) AT3G10420 | Symbols: | sporulation protein-related | chr3:3239307-3241571 FORWARDSpoIIIAA AAA_R3H protein|uncharacterized protein ycf45, putative, expressed",-1.0209169]
[null,20.1,"stress.biotic","Os07g0106700","Transcript","Dirigent protein|dirigent, putative, expressed",7.312433,null,29.5,"protein.degradation","Os06g0217700","Transcript","weakly similar to ( 105) AT4G38100 | Symbols: | unknown protein | chr4:17887033-17888177 REVERSE protein|expressed protein",4.255716,null,27.2,"RNA.transcription","Os12g0134300","Transcript","weakly similar to ( 135) AT1G03280 | Symbols: | transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein | chr1:803635-806758 FORWARD protein|transcription initiation factor, putative, expressed",-1.8095843]
[null,20.1,"stress.biotic","Os06g0691200","Transcript","moderately similar to ( 270) AT1G73620 | Symbols: | thaumatin-like protein, putative / pathogenesis-related protein, putative | chr1:27681432-27682954 FORWARDweakly similar to ( 191) TP1A_MALDO Thaumatin-like protein 1a precursor (Allergen Mal d 2) (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) - Malus domestica (Apple) (Malus sylvestris)THN Thaumatin protein|thaumatin family domain containing protein, expressed",2.5318286,null,29.5,"protein.degradation","Os06g0318600","Transcript","highly similar to ( 578) AT3G57680 | Symbols: | peptidase S41 family protein | chr3:21381054-21383629 FORWARDPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP3 - Putative C-terminal processing peptidase homologue, expressed",-1.1053046,null,27.2,"RNA.transcription","Os08g0202300","Transcript","weakly similar to ( 137) ATMG00860 | Symbols: ORF158 | hypothetical protein | chrM:235916-236392 FORWARDweakly similar to ( 126) RRPO_OENBE RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Bertero's evening primrose)RT_LTR RVT_1 RT_ZFREV_like RT_Rtv protein|retrotransposon protein, putative, unclassified, expressed",-1.620855]
[null,20.1,"stress.biotic","Os12g0468300","Transcript","weakly similar to ( 102) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3992846,null,29.5,"protein.degradation","Os05g0517500","Transcript","moderately similar to ( 388) AT1G78680 | Symbols: ATGGH2 | ATGGH2 (gamma-glutamyl hydrolase 2); omega peptidase | chr1:29593933-29596037 FORWARDmoderately similar to ( 331) GGH_SOYBN Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) - Glycine max (Soybean) GATase1_Glutamyl_Hydrolase Peptidase_C26 protein|gamma-glutamyl hydrolase precursor, putative, expressed",1.7070465,null,27.2,"RNA.transcription","Os11g0448400","Transcript","moderately similar to ( 356) AT1G08540 | Symbols: SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2 | SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr1:2703461-2706696 FORWARDPRK07406 PRK05901 RpoD PRK09210 PRK07598 PRK07405 PRK07921 PRK05949 PRK05658 PRK05657 rpoH2 FliA PRK06596 fliA PRK06288 PRK05803 PRK07670 PRK08215 PRK05572 PRK08301 protein|RNA polymerase sigma factor, putative, expressed",1.1997461]
[null,20.1,"stress.biotic","Os01g0621900","Transcript","moderately similar to ( 447) AT1G64140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink). | chr1:23804069-23806009 REVERSE protein|expressed protein",-1.0719166,null,29.5,"protein.degradation","Os03g0389100","Transcript","moderately similar to ( 249) AT4G25110 | Symbols: AtMC2 | AtMC2 (metacaspase 2); cysteine-type endopeptidase | chr4:12887738-12889953 REVERSE Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",1.4400749,null,27.2,"RNA.transcription","Os05g0586600","Transcript","moderately similar to ( 308) AT5G24120 | Symbols: SIGE, SIG5, ATSIG5 | SIGE (SIGMA FACTOR E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr5:8157794-8159746 REVERSEPRK05949 PRK07405 PRK07406 RpoD PRK05901 PRK07598 PRK05657 PRK09210 PRK05658 protein|RNA polymerase sigma factor, putative, expressed",1.5925454]
[null,20.1,"stress.biotic","Os01g0139000","Transcript","weakly similar to ( 184) AT3G18260 | Symbols: | reticulon family protein (RTNLB9) | chr3:6260328-6261504 REVERSE Reticulon protein|reticulon domain containing protein, putative, expressed",3.424846,null,29.5,"protein.degradation","Os04g0682500","Transcript","moderately similar to ( 322) AT4G00590 | Symbols: | asparaginase 2 family protein | chr4:252835-254880 FORWARD Taspase1_like COG1446 Asparaginase_2 Glycosylasparaginase ASRGL1_like Ntn_Asparaginase_2_like Asparaginase_2 PRK10226 protein|L-asparaginase precursor protein, putative, expressed",0.96303064,null,27.2,"RNA.transcription","Os03g0646800","Transcript","highly similar to ( 759) AT4G21710 | Symbols: NRPB2, EMB1989, RPB2 | NRPB2; DNA binding / DNA-directed RNA polymerase | chr4:11535684-11542200 REVERSEweakly similar to ( 161) RPOB_MESVI DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride RNA_pol_B_RPB2 PRK08565 PRK07225 RpoB RNA_pol_Rpb2_6 rpoB rpoB RNA_pol_Rpb2_7 PRK09603 protein|DNA-directed RNA polymerase II subunit RPB2, putative, expressed",-1.8766861]
[null,20.1,"stress.biotic","Os03g0132900","Transcript","moderately similar to ( 277) AT3G12500 | Symbols: ATHCHIB, PR3, PR-3, CHI-B, B-CHI | ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase | chr3:3962501-3963945 REVERSEmoderately similar to ( 298) CHIA_SECCE Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed chitinase-a) (RSC-a) - Secale cereale (Rye) Glyco_hydro_19 chitinase_glyco_hydro_19 protein|CHIT16 - Chitinase family protein precursor, expressed",-1.4874182,null,29.5,"protein.degradation","Os11g0134700","Transcript","moderately similar to ( 308) AT5G04200 | Symbols: AtMC9 | AtMC9 (metacaspase 9); cysteine-type peptidase | chr5:1153893-1154870 FORWARD Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",2.1503115,null,27.2,"RNA.transcription","Os02g0639700","Transcript","weakly similar to ( 180) AT3G15390 | Symbols: SDE5 | SDE5 (silencing defective 5) | chr3:5196689-5199531 REVERSE protein|DUF1771 domain containing protein, putative, expressed",-0.997987]
[null,20.1,"stress.biotic","Os07g0617100","Transcript","protein|dirigent, putative, expressed",2.6670353,null,29.5,"protein.degradation","Os01g0743600","Transcript","moderately similar to ( 412) AT2G25740 | Symbols: | ATP-dependent protease La (LON) domain-containing protein | chr2:10980175-10983632 FORWARD protein|ATP-dependent protease La, putative, expressed",1.2579664,null,27.2,"RNA.transcription","Os05g0589200","Transcript","very weakly similar to (84.0) AT3G53920 | Symbols: SIGC, SIG3 | SIGC (RNA POLYMERASE SIGMA-SUBUNIT C); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr3:19961041-19963820 REVERSE protein|RNA polymerase sigma factor, putative, expressed",3.289567]
[null,20.1,"stress.biotic","Os10g0370400","Transcript","very weakly similar to (91.3) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",-1.0561796,null,29.5,"protein.degradation","Os05g0496400","Transcript","moderately similar to ( 312) AT1G79340 | Symbols: AtMC4 | AtMC4 (metacaspase 4); cysteine-type peptidase | chr1:29842849-29844368 FORWARD Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",-1.4738307,null,27.2,"RNA.transcription","Os04g0487300","Transcript","weakly similar to ( 189) AT3G22320 | Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | NRPB5; DNA binding / DNA-directed RNA polymerase | chr3:7891045-7892094 REVERSE RNA_pol_Rpb5_N protein|DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed",-1.2585107]
[null,20.1,"stress.biotic","Os02g0199200","Transcript","NB-ARC protein|NB-ARC domain containing disease resistance protein, putative, expressed",-1.2066263,null,29.5,"protein.degradation","Os01g0295900","Transcript","weakly similar to ( 191) AT2G45270 | Symbols: | glycoprotease M22 family protein | chr2:18666583-18669332 FORWARD PRK09604 QRI7 Peptidase_M22 protein|O-sialoglycoprotein endopeptidase, putative, expressed",2.4729044,null,27.2,"RNA.transcription","Os02g0654400","Transcript","moderately similar to ( 238) AT5G43130 | Symbols: TAF4, TAF4B | TAF4 (TBP-ASSOCIATED FACTOR 4); transcription initiation factor | chr5:17315608-17321144 REVERSETAF4 protein|transcription initiation factor, putative, expressed",-0.97860146]
[null,20.1,"stress.biotic","Os06g0514800","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION9 - Plant thionin family protein precursor, expressed",-1.6636208,null,29.5,"protein.degradation","Os02g0117400","Transcript","moderately similar to ( 488) AT2G03120 | Symbols: ATSPP | ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase | chr2:937554-940083 FORWARD Peptidase_A22B PSN protein|signal peptide peptidase domain containing protein, expressed",-1.1048995]
[null,20.1,"stress.biotic","Os11g0226700","Transcript","weakly similar to ( 136) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|MLA10, putative, expressed",-1.1133829,null,29.5,"protein.degradation","Os01g0664000","Transcript","highly similar to ( 528) AT5G46390 | Symbols: | peptidase S41 family protein | chr5:18816612-18819148 FORWARDPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP1 - Putative C-terminal processing peptidase homologue, expressed",1.0055195,null,27.3,"RNA.regulation of transcription","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584]
[null,20.1,"stress.biotic","Os06g0513050","Transcript","weakly similar to ( 103) THN7_HORVU Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic protein] - Hordeum vulgare (Barley) protein|THION3 - Plant thionin family protein precursor, expressed",-1.6636208,null,"29.5.1","protein.degradation.subtilases","Os04g0543700","Transcript","highly similar to ( 586) AT2G19170 | Symbols: SLP3 | SLP3; serine-type peptidase | chr2:8314154-8317620 REVERSEPeptidase_S8 protein|OsSub42 - Putative Subtilisin homologue, expressed",-1.4760503,null,27.3,"RNA.regulation of transcription","Os08g0107800","Transcript","moderately similar to ( 286) AT1G62910 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:23299060-23303162 FORWARDhighly similar to ( 786) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|Rf1, mitochondrial precursor, putative, expressed",-1.7094434]
[null,20.1,"stress.biotic","Os02g0102800","Transcript","highly similar to ( 907) AT4G19040 | Symbols: EDR2 | EDR2; lipid binding | chr4:10431799-10437171 REVERSEDUF1336 START START START protein|START domain containing protein, expressed",2.264417,null,"29.5.1","protein.degradation.subtilases","Os01g0769200","Transcript","highly similar to ( 992) AT4G20430 | Symbols: | subtilase family protein | chr4:11017656-11021105 REVERSEPeptidase_S8 protein|OsSub4 - Putative Subtilisin homologue, expressed",1.6759982,null,"27.3.1","RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family","Os02g0683500","Transcript","moderately similar to ( 202) AT1G01030 | Symbols: NGA3 | NGA3 (NGATHA3); transcription factor | chr1:11864-12940 REVERSEB3 protein|B3 DNA binding domain containing protein, expressed",-1.3406903]
[null,20.1,"stress.biotic","Os10g0491000","Transcript","weakly similar to ( 172) AT2G15220 | Symbols: | secretory protein, putative | chr2:6608689-6609366 FORWARDBSP protein|secretory protein, putative, expressed",-1.8751928,null,"29.5.1","protein.degradation.subtilases","Os04g0121100","Transcript","highly similar to ( 590) AT4G10540 | Symbols: | subtilase family protein | chr4:6512515-6515743 REVERSE protein|OsSub34 - Putative Subtilisin homologue, expressed",3.5140316,null,"27.3.2","RNA.regulation of transcription.Alfin-like","Os07g0233300","Transcript","moderately similar to ( 295) AT5G05610 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding | chr5:1677331-1678942 REVERSE protein|PHD finger protein, putative, expressed",-1.0386173]
[null,20.1,"stress.biotic","Os06g0702700","Transcript","weakly similar to ( 181) AT2G24390 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related (TAIR:AT4G31310.1); Has 167 Blast hits to 167 proteins in 49 species: Archae - 12; Bacteria - 32; Metazoa - 0; Fungi - 33; Plants - 61; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | chr2:10373796-10374654 FORWARD protein|AIG2-like family domain containing protein, expressed",-1.2020655,null,"29.5.1","protein.degradation.subtilases","Os09g0441000","Transcript","highly similar to ( 677) AT2G05920 | Symbols: | subtilase family protein | chr2:2269831-2272207 REVERSEPA_subtilisin_like PA protein|OsSub57 - Putative Subtilisin homologue, expressed",2.7460892,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os10g0371100","Transcript","weakly similar to ( 109) AT1G78080 | Symbols: RAP2.4 | RAP2.4 (related to AP2 4); DNA binding / transcription factor | chr1:29364790-29365794 FORWARDAP2 AP2 protein|ethylene-responsive transcription factor, putative, expressed",1.6778313]
[null,20.1,"stress.biotic","Os02g0538700","Transcript","weakly similar to ( 169) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",5.4522204,null,"29.5.2","protein.degradation.autophagy","Os10g0163100","Transcript","highly similar to ( 788) AT2G31260 | Symbols: APG9, ATAPG9 | APG9 (autophagy 9) | chr2:13322291-13326293 REVERSE APG9 protein|autophagy protein 9, putative, expressed",1.2469201,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108]
[null,20.1,"stress.biotic","Os02g0605900","Transcript","moderately similar to ( 322) AT3G54420 | Symbols: ATEP3, ATCHITIV, CHIV | ATEP3; chitinase | chr3:20145935-20147034 FORWARDmoderately similar to ( 298) CHI4_PHAVU Endochitinase PR4 precursor (EC 3.2.1.14) - Phaseolus vulgaris (Kidney bean) (French bean) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT1 - Chitinase family protein precursor, expressed",-1.6030992,null,"29.5.3","protein.degradation.cysteine protease","Os08g0556900","Transcript","moderately similar to ( 464) AT5G50260 | Symbols: | cysteine proteinase, putative | chr5:20455605-20456862 FORWARDmoderately similar to ( 445) CYSEP_PHAVU Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) Peptidase_C1 Peptidase_C1A Pept_C1 Peptidase_C1A_CathepsinB Peptidase_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinX COG4870 protein|vignain precursor, putative, expressed",2.91878,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0341000","Transcript","very weakly similar to (80.1) AT1G72360 | Symbols: | ethylene-responsive element-binding protein, putative | chr1:27241904-27242777 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.8170595]
[null,20.1,"stress.biotic","Os03g0243900","Transcript","moderately similar to ( 266) AT4G38660 | Symbols: | thaumatin, putative | chr4:18066448-18067792 REVERSEmoderately similar to ( 210) TLP1_PRUPE Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach)THN Thaumatin protein|thaumatin, putative, expressed",5.939701,null,"29.5.3","protein.degradation.cysteine protease","Os04g0311400","Transcript","moderately similar to ( 494) AT4G39090 | Symbols: RD19, RD19A | RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase | chr4:18215826-18217326 REVERSEhighly similar to ( 575) CYSP1_MAIZE Cysteine proteinase 1 precursor (EC 3.4.22.-) - Zea mays (Maize) Peptidase_C1A Peptidase_C1 Pept_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinB Peptidase_C1 Peptidase_C1A_CathepsinX COG4870 protein|cysteine proteinase 1 precursor, putative, expressed",1.1169826,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os01g0165000","Transcript","weakly similar to ( 124) AT2G40340 | Symbols: | AP2 domain-containing transcription factor, putative (DRE2B) | chr2:16848665-16850357 REVERSEAP2 AP2 protein|AP2 domain containing protein, expressed",-0.9488856]
[null,20.1,"stress.biotic","Os12g0159600","Transcript","weakly similar to ( 183) AT3G44220 | Symbols: | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | chr3:15928216-15929645 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.0807091,null,"29.5.3","protein.degradation.cysteine protease","Os04g0670200","Transcript","highly similar to ( 529) AT5G43060 | Symbols: | cysteine proteinase, putative / thiol protease, putative | chr5:17269784-17272117 REVERSEhighly similar to ( 855) ORYB_ORYSA Oryzain beta chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) Peptidase_C1 Peptidase_C1A Pept_C1 Peptidase_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinB Peptidase_C1A_CathepsinX protein|oryzain beta chain precursor, putative, expressed",1.2948819,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057]
[null,20.1,"stress.biotic","Os10g0105933","Transcript","moderately similar to ( 220) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 106) HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.1420423,null,"29.5.3","protein.degradation.cysteine protease","Os09g0487700","Transcript","moderately similar to ( 251) AT3G57810 | Symbols: | OTU-like cysteine protease family protein | chr3:21416336-21417809 FORWARD OTU protein|OTU-like cysteine protease family protein, putative, expressed",1.2108345,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0657000","Transcript","weakly similar to ( 132) AT2G44940 | Symbols: | AP2 domain-containing transcription factor TINY, putative | chr2:18537294-18538181 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",4.613399]
[null,20.1,"stress.biotic","Os08g0375400","Transcript","very weakly similar to (81.3) AT1G22900 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: disease resistance-responsive family protein (TAIR:AT5G42500.1); Has 560 Blast hits to 559 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8103910-8104491 REVERSEDirigent protein|dirigent, putative, expressed",4.7085958,null,"29.5.3","protein.degradation.cysteine protease","Os03g0266000","Transcript","moderately similar to ( 222) AT2G38025 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: OTU-like cysteine protease family protein (TAIR:AT3G57810.3); Has 100 Blast hits to 100 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr2:15915239-15916692 REVERSE protein|OTU-like cysteine protease family protein, putative, expressed",1.0999006,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os09g0518900","Transcript","moderately similar to ( 245) AT1G01180 | Symbols: | unknown protein | chr1:75633-77446 FORWARD protein|expressed protein",2.819342]
[null,20.1,"stress.biotic","Os11g0654100","Transcript","weakly similar to ( 108) AT3G50950 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr3:18936127-18938685 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",5.4555035,null,"29.5.3","protein.degradation.cysteine protease","Os01g0900900","Transcript","moderately similar to ( 204) AT3G57810 | Symbols: | OTU-like cysteine protease family protein | chr3:21416336-21417809 FORWARD OTU protein|OTU-like cysteine protease family protein, putative, expressed",-1.0183516,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0346200","Transcript","very weakly similar to (92.8) AT5G05410 | Symbols: DREB2A, DREB2 | DREB2A; DNA binding / transcription activator/ transcription factor | chr5:1602650-1603657 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.1557907]
[null,20.1,"stress.biotic","Os08g0190300","Transcript","weakly similar to ( 152) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE NB-ARC protein|NB-ARC domain containing protein, expressed",2.215337,null,"29.5.4","protein.degradation.aspartate protease","Os06g0118700","Transcript","weakly similar to ( 191) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE protein|aspartic protease, putative, expressed",7.5530396,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0818800","Transcript","moderately similar to ( 256) AT4G36920 | Symbols: AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor | chr4:17400998-17403140 FORWARDweakly similar to ( 151) BBM1_BRANA Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape)AP2 protein|AP2 domain containing protein, expressed",-1.0689335]
[null,20.1,"stress.biotic","Os01g0350000","Transcript","moderately similar to ( 307) AT5G17540 | Symbols: | transferase family protein | chr5:5782061-5783682 REVERSEweakly similar to ( 154) HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) - Dianthus caryophyllus (Carnation) (Clove pink)Transferase protein|transferase family protein, putative, expressed",1.5405397,null,"29.5.4","protein.degradation.aspartate protease","Os01g0140100","Transcript","moderately similar to ( 422) AT1G25510 | Symbols: | aspartyl protease family protein | chr1:8959372-8960823 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.615424,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0389000","Transcript","weakly similar to ( 137) AT2G41710 | Symbols: | ovule development protein, putative | chr2:17400274-17402903 REVERSE protein|AP2 domain containing protein, expressed",2.0078347]
[null,20.1,"stress.biotic","Os08g0522500","Transcript","moderately similar to ( 428) AT1G05850 | Symbols: POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1 | POM1 (POM-POM1); chitinase | chr1:1766833-1768117 REVERSEmoderately similar to ( 207) CHI2_BRANA Endochitinase CH25 precursor (EC 3.2.1.14) - Brassica napus (Rape) chitinase_glyco_hydro_19 Glyco_hydro_19 protein|CHIT12 - Chitinase family protein precursor, expressed",1.569142,null,"29.5.4","protein.degradation.aspartate protease","Os07g0533000","Transcript","moderately similar to ( 201) AT2G03200 | Symbols: | aspartyl protease family protein | chr2:966506-967891 REVERSE Asp protein|aspartic proteinase nepenthesin precursor, putative, expressed",2.0685098,null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696]
[null,"20.1.1","stress.biotic.respiratory burst","Os12g0541300","Transcript","highly similar to ( 973) AT5G51060 | Symbols: RHD2, ATRBOHC, RBOHC | RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase | chr5:20757484-20762175 REVERSE NAD_binding_6 NADPH_Ox FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",2.361488,null,"29.5.4","protein.degradation.aspartate protease","Os09g0423500","Transcript","moderately similar to ( 367) AT1G79720 | Symbols: | aspartyl protease family protein | chr1:29997259-29998951 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.8926609,null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0753500","Transcript","moderately similar to ( 450) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.6797137]
[null,"20.1.1","stress.biotic.respiratory burst","Os01g0360200","Transcript","highly similar to ( 981) AT5G47910 | Symbols: RBOHD, ATRBOHD | RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | chr5:19397585-19401768 FORWARD NADPH_Ox NAD_binding_6 FAD_binding_8 Ferric_reduct protein|respiratory burst oxidase, putative, expressed",3.1213465,null,"29.5.4","protein.degradation.aspartate protease","Os04g0685200","Transcript","moderately similar to ( 246) AT3G52500 | Symbols: | aspartyl protease family protein | chr3:19465644-19467053 REVERSE Asp protein|Eukaryotic aspartyl protease domain containing protein, expressed",2.512636,null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0670800","Transcript","moderately similar to ( 480) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.0322542]
[null,"20.1.7","stress.biotic.PR-proteins","Os04g0470500","Transcript","moderately similar to ( 365) AT4G26090 | Symbols: RPS2 | RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding | chr4:13224596-13227325 FORWARD NB-ARC protein|NBS-LRR type disease resistance protein, putative, expressed",-1.1549082,null,"29.5.4","protein.degradation.aspartate protease","Os01g0598600","Transcript","moderately similar to ( 384) AT1G01300 | Symbols: | aspartyl protease family protein | chr1:117065-118522 FORWARD Asp protein|aspartic proteinase, putative, expressed",1.9372562,null,"27.3.5","RNA.regulation of transcription.ARR","Os02g0182100","Transcript","moderately similar to ( 321) AT2G25180 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/ two-component response regulator | chr2:10724490-10726961 REVERSEvery weakly similar to (84.3) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)AtoC REC REC Response_reg OmpR CheY COG4753 protein|two-component response regulator, putative, expressed",-1.0548993]
[null,"20.1.7","stress.biotic.PR-proteins","Os01g0953400","Transcript","moderately similar to ( 215) AT5G45500 | Symbols: | unknown protein | chr5:18432636-18434951 REVERSE protein|Leucine Rich Repeat family protein, expressed",1.2142234,null,"29.5.4","protein.degradation.aspartate protease","Os05g0567100","Transcript","highly similar to ( 714) AT1G11910 | Symbols: | aspartyl protease family protein | chr1:4017119-4019874 REVERSEhighly similar to ( 920) ASPR1_ORYSA Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) Asp protein|aspartic proteinase oryzasin-1 precursor, putative, expressed",1.4807552,null,"27.3.5","RNA.regulation of transcription.ARR","Os11g0143300","Transcript","moderately similar to ( 201) AT3G57040 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator | chr3:21110059-21111228 FORWARDREC REC protein|OsRR10 type-A response regulator, expressed",-1.0985559]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0179000","Transcript","weakly similar to ( 141) AT5G49040 | Symbols: | disease resistance-responsive protein-related / dirigent protein-related | chr5:19882676-19883251 REVERSEDirigent protein|dirigent, putative, expressed",3.859347,null,"29.5.4","protein.degradation.aspartate protease","Os04g0535200","Transcript","moderately similar to ( 306) AT4G16563 | Symbols: | aspartyl protease family protein | chr4:9329933-9331432 REVERSE protein|aspartyl protease family protein, putative, expressed",5.323376,null,"27.3.5","RNA.regulation of transcription.ARR","Os04g0442300","Transcript","weakly similar to ( 125) AT1G59940 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator | chr1:22065894-22066895 REVERSEREC REC AtoC Response_reg CheY PleD protein|OsRR1 type-A response regulator, expressed",1.9674207]
[null,"20.1.7","stress.biotic.PR-proteins","Os01g0603100","Transcript","weakly similar to ( 191) AT3G46530 | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17130739-17133246 REVERSE NB-ARC protein|MLA1, putative, expressed",1.8115629,null,"29.5.4","protein.degradation.aspartate protease","Os06g0610800","Transcript","moderately similar to ( 304) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase, putative, expressed",4.0232925,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0915600","Transcript","weakly similar to ( 178) AT3G07340 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:2341188-2343288 REVERSE protein|BHLH transcription factor, putative, expressed",1.1191101]
[null,"20.1.7","stress.biotic.PR-proteins","Os10g0130800","Transcript","moderately similar to ( 217) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|disease resistance RPP13-like protein 1, putative, expressed",1.999849,null,"29.5.4","protein.degradation.aspartate protease","Os06g0304600","Transcript","moderately similar to ( 246) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSEvery weakly similar to (81.3) ASP1_ORYSA Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) Asp protein|aspartic proteinase nepenthesin-2 precursor, putative, expressed",5.0855823000000004,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os08g0524800","Transcript","weakly similar to ( 160) AT5G48560 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:19684160-19686871 FORWARD protein|BHLH transcription factor, putative, expressed",1.7823194]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0179700","Transcript","weakly similar to ( 152) AT5G42500 | Symbols: | disease resistance-responsive family protein | chr5:16994359-16994916 REVERSEDirigent protein|dirigent, putative, expressed",2.4432633,null,"29.5.4","protein.degradation.aspartate protease","Os02g0720900","Transcript","moderately similar to ( 249) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase nepenthesin-1 precursor, putative, expressed",1.9263893,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0135700","Transcript","weakly similar to ( 199) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|BHLH transcription factor, putative, expressed",2.1326425]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0652100","Transcript","very weakly similar to (89.0) AT3G46730 | Symbols: | disease resistance protein (CC-NBS class), putative | chr3:17213069-17215612 REVERSE protein|expressed protein",1.8690187,null,"29.5.4","protein.degradation.aspartate protease","Os08g0208200","Transcript","very weakly similar to (87.0) AT4G30030 | Symbols: | aspartyl protease family protein | chr4:14682210-14683484 REVERSE protein|expressed protein",2.2369096,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0691500","Transcript","weakly similar to ( 182) AT1G72210 | Symbols: | basic helix-loop-helix (bHLH) family protein (bHLH096) | chr1:27180066-27182268 FORWARD protein|helix-loop-helix DNA-binding protein, putative, expressed",3.364888]
[null,"20.1.7","stress.biotic.PR-proteins","Os07g0273700","Transcript","moderately similar to ( 290) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|WRKY123, expressed",4.3932843,null,"29.5.5","protein.degradation.serine protease","Os02g0815700","Transcript","moderately similar to ( 374) AT4G17740 | Symbols: | C-terminal processing protease, putative | chr4:9867088-9869719 REVERSEPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP2 - Putative C-terminal processing peptidase homologue, expressed",1.8624986,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0952800","Transcript","weakly similar to ( 111) AT3G56970 | Symbols: BHLH038, ORG2 | BHLH038; DNA binding / transcription factor | chr3:21084204-21085094 REVERSE protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.7507919]
[null,"20.1.7","stress.biotic.PR-proteins","Os10g0130600","Transcript","moderately similar to ( 298) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD NB-ARC protein|powdery mildew resistance protein PM3b, putative, expressed",-1.62406,null,"29.5.5","protein.degradation.serine protease","Os02g0114200","Transcript","highly similar to ( 686) AT3G10410 | Symbols: scpl49 | scpl49 (serine carboxypeptidase-like 49); serine-type carboxypeptidase | chr3:3235518-3238063 REVERSEnearly identical (1031) CBP3_ORYSA Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) Peptidase_S10 COG2939 protein|OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed",1.4250225,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os09g0510500","Transcript","weakly similar to ( 126) AT5G50915 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:20710764-20712252 REVERSE protein|BEE 1, putative, expressed",3.5891144]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0645400","Transcript","weakly similar to ( 104) AT1G65870 | Symbols: | disease resistance-responsive family protein | chr1:24503624-24504193 FORWARDDirigent protein|dirigent, putative, expressed",8.899306,null,"29.5.5","protein.degradation.serine protease","Os05g0568900","Transcript","highly similar to ( 599) AT3G27925 | Symbols: DEGP1, Deg1 | DEGP1 (DegP protease 1); serine-type endopeptidase/ serine-type peptidase | chr3:10366659-10368864 REVERSE DegQ PRK10942 PRK10898 PRK10139 protein|OsDegp9 - Putative Deg protease homologue, expressed",1.9017496,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os07g0549600","Transcript","very weakly similar to (87.0) AT2G16910 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding / transcription factor | chr2:7331721-7334077 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",1.4914767]
[null,"20.1.7","stress.biotic.PR-proteins","Os04g0111100","Transcript","moderately similar to ( 241) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|rp1, putative, expressed",-1.3740374,null,"29.5.5","protein.degradation.serine protease","Os04g0459900","Transcript","highly similar to ( 566) AT5G39830 | Symbols: DEGP8, DEG8 | DEG8; peptidase/ serine-type peptidase | chr5:15942883-15945676 FORWARD DegQ PRK10942 PRK10139 PRK10898 protein|OsDegp5 - Putative Deg protease homologue, expressed",2.7586281,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os05g0139100","Transcript","weakly similar to ( 113) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",2.685197]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0629600","Transcript","weakly similar to ( 117) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE protein|disease resistance protein RPM1, putative, expressed",-1.0702428,null,"29.5.5","protein.degradation.serine protease","Os08g0546700","Transcript","moderately similar to ( 284) AT1G63120 | Symbols: ATRBL2 | ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase | chr1:23409054-23410725 REVERSE Rhomboid COG0705 protein|OsRhmbd14 - Putative Rhomboid homologue, expressed",2.3912983,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0603600","Transcript","weakly similar to ( 151) AT1G05805 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr1:1744843-1747427 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.372179]
[null,"20.1.7","stress.biotic.PR-proteins","Os01g0721300","Transcript","very weakly similar to (81.3) AT3G14470 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD protein|NB-ARC domain containing protein, expressed",-1.2860575,null,"29.5.5","protein.degradation.serine protease","Os05g0268500","Transcript","moderately similar to ( 222) AT2G35770 | Symbols: scpl28 | scpl28 (serine carboxypeptidase-like 28); serine-type carboxypeptidase | chr2:15034179-15036497 REVERSEmoderately similar to ( 251) CBP2_WHEAT Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca Peptidase_S10 COG2939 protein|OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed",-0.97590154,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0782500","Transcript","weakly similar to ( 104) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|phytochrome-interacting factor 4, putative, expressed",1.688983]
[null,"20.1.7","stress.biotic.PR-proteins","Os09g0357400","Transcript","weakly similar to ( 166) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC DUF1263 protein|retrotransposon protein, putative, unclassified, expressed",-1.6483129,null,"29.5.5","protein.degradation.serine protease","Os11g0461000","Transcript","moderately similar to ( 236) AT1G33540 | Symbols: scpl18 | scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | chr1:12162349-12164700 REVERSEweakly similar to ( 198) CBP1_HORVU Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo Peptidase_S10 COG2939 protein|OsSCP62 - Putative Serine Carboxypeptidase homologue, expressed",1.9769455,null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os10g0544200","Transcript","weakly similar to ( 172) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|inducer of CBF expression 2, putative, expressed",3.7744904]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0657900","Transcript","moderately similar to ( 236) AT5G48620 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr5:19717406-19720932 FORWARD NB-ARC protein|RGH1A, putative, expressed",-2.0279644,null,"29.5.5","protein.degradation.serine protease","Os03g0730500","Transcript","moderately similar to ( 298) AT1G33540 | Symbols: scpl18 | scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | chr1:12162349-12164700 REVERSEmoderately similar to ( 225) CBP1_ORYSA Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) Peptidase_S10 COG2939 protein|OsSCP20 - Putative Serine Carboxypeptidase homologue, expressed",3.3840637,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0731700","Transcript","weakly similar to ( 173) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.7829956]
[null,"20.1.7","stress.biotic.PR-proteins","Os01g0760400","Transcript","highly similar to ( 998) AT4G23440 | Symbols: | nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor | chr4:12237765-12240659 FORWARD protein|AP003256-AK101847 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",-1.2372891,null,"29.5.5","protein.degradation.serine protease","Os02g0687900","Transcript","moderately similar to ( 288) AT5G09640 | Symbols: SNG2, SCPL19 | SCPL19; serine-type carboxypeptidase/ sinapoyltransferase | chr5:2988373-2990966 FORWARDmoderately similar to ( 224) CBP1_HORVU Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo Peptidase_S10 COG2939 protein|OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed",4.302679,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0536300","Transcript","very weakly similar to (94.4) AT2G33500 | Symbols: | zinc finger (B-box type) family protein | chr2:14188159-14190046 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.903288]
[null,"20.1.7","stress.biotic.PR-proteins","Os09g0481600","Transcript","highly similar to ( 989) AT5G56220 | Symbols: | nucleoside-triphosphatase/ nucleotide binding | chr5:22754871-22757792 FORWARD protein|AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed",3.2311223,null,"29.5.7","protein.degradation.metalloprotease","Os01g0574400","Transcript","highly similar to ( 861) AT2G26140 | Symbols: ftsh4 | ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase | chr2:11131939-11135126 REVERSEmoderately similar to ( 346) FTSH_ORYSA Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) HflB hflB Peptidase_M41 RPT1 PRK03992 AAA SpoVK COG1223 protein|OsFtsH4 FtsH protease, homologue of AtFtsH4, expressed",-1.1571645,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0148000","Transcript","weakly similar to ( 115) AT5G57180 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator | chr5:23168393-23169523 FORWARD protein|CCT motif family protein, expressed",6.6167235]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0644700","Transcript","weakly similar to ( 105) AT5G42510 | Symbols: | disease resistance-responsive family protein | chr5:16998268-16998816 REVERSEDirigent protein|dirigent, putative, expressed",6.1477056,null,"29.5.7","protein.degradation.metalloprotease","Os03g0729000","Transcript","highly similar to ( 718) AT1G17870 | Symbols: ATEGY3, EGY3 | EGY3 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3) | chr1:6150036-6152185 REVERSE protein|peptidase, M50 family, putative, expressed",-1.8073081,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0428400","Transcript","protein|ZIM motif family protein, expressed",1.5630218]
[null,"20.1.7","stress.biotic.PR-proteins","Os09g0272900","Transcript","moderately similar to ( 306) AT1G12220 | Symbols: RPS5 | RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | chr1:4145011-4147680 FORWARD NB-ARC protein|disease resistance protein RPS2, putative, expressed",-1.7700769,null,"29.5.7","protein.degradation.metalloprotease","Os07g0570100","Transcript","nearly identical (1256) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr Peptidase_M16 PqqL Peptidase_M16_C protein|insulin-degrading enzyme, putative, expressed",-1.616642,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613]
[null,"20.1.7","stress.biotic.PR-proteins","Os10g0163040","Transcript","moderately similar to ( 384) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|disease resistance protein RPM1, putative, expressed",2.3213081,null,"29.5.7","protein.degradation.metalloprotease","Os01g0779100","Transcript","highly similar to ( 701) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr protein|insulin-degrading enzyme, putative, expressed",1.1154661,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0264200","Transcript","weakly similar to ( 191) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",2.6492913]
[null,"20.1.7","stress.biotic.PR-proteins","Os06g0146100","Transcript","moderately similar to ( 268) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|NBS-LRR disease resistance protein, putative, expressed",1.5859522,null,"29.5.7","protein.degradation.metalloprotease","Os01g0778800","Transcript","nearly identical (1154) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr PqqL Peptidase_M16 Peptidase_M16_C protein|insulin-degrading enzyme, putative, expressed",1.1154661,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0713000","Transcript","weakly similar to ( 137) AT1G75540 | Symbols: STH2 | STH2 (SALT TOLERANCE HOMOLOG2); transcription factor/ zinc ion binding | chr1:28366059-28367398 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7561938]
[null,"20.1.7","stress.biotic.PR-proteins","Os11g0639600","Transcript","moderately similar to ( 222) AT3G07040 | Symbols: RPM1, RPS3 | RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | chr3:2226244-2229024 REVERSE NB-ARC protein|non-TIR-NBS-LRR type resistance protein, putative, expressed",-1.0066692,null,"29.5.9","protein.degradation.AAA type","Os12g0431100","Transcript","highly similar to ( 508) AT5G40010 | Symbols: AATP1 | AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr5:16020218-16021762 REVERSE AAA protein|ATPase 3, putative, expressed",-2.2190163,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os03g0711100","Transcript","weakly similar to ( 135) AT1G73870 | Symbols: | zinc finger (B-box type) family protein | chr1:27779214-27780522 FORWARD protein|CCT/B-box zinc finger protein, putative, expressed",2.263133]
[null,"20.1.7","stress.biotic.PR-proteins","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634,null,"29.5.9","protein.degradation.AAA type","Os02g0706500","Transcript","highly similar to ( 610) AT2G18330 | Symbols: | AAA-type ATPase family protein | chr2:7965829-7968915 FORWARDvery weakly similar to (85.5) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) AAA COG1223 SpoVK RPT1 PRK03992 protein|AAA-type ATPase family protein, putative, expressed",-1.5348808,null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os05g0204600","Transcript","weakly similar to ( 140) AT1G78600 | Symbols: LZF1, STH3 | LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding | chr1:29567370-29568662 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7392745]
[null,"20.1.7","stress.biotic.PR-proteins","Os04g0111900","Transcript","moderately similar to ( 316) AT3G14460 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4851990-4856264 REVERSE NB-ARC protein|disease resistance protein RGA3, putative, expressed",-1.3404331,null,"29.5.9","protein.degradation.AAA type","Os09g0515100","Transcript","nearly identical (1078) AT1G05910 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARDmoderately similar to ( 219) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) RPT1 PRK03992 SpoVK AAA HflB hflB COG1223 BROMO protein|bromodomain protein 103, putative, expressed",-1.4211426,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os03g0764900","Transcript","weakly similar to ( 110) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDvery weakly similar to (95.5) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-2.1698039]
[null,"20.1.7","stress.biotic.PR-proteins","Os04g0648200","Transcript","moderately similar to ( 329) AT1G74190 | Symbols: AtRLP15 | AtRLP15 (Receptor Like Protein 15); protein binding | chr1:27902590-27906158 REVERSEweakly similar to ( 181) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) protein|Cf-4A protein, putative, expressed",-2.462386,null,"29.5.9","protein.degradation.AAA type","Os06g0109400","Transcript","highly similar to ( 678) AT3G01610 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr3:231787-235057 FORWARDmoderately similar to ( 446) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) SpoVK RPT1 PRK03992 AAA HflB hflB COG1223 protein|AAA family ATPase, putative, expressed",-1.259514,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0673700","Transcript","weakly similar to ( 145) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 118) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975]
[null,20.2,"stress.abiotic","Os08g0546100","Transcript","moderately similar to ( 216) AT5G52060 | Symbols: ATBAG1 | ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding | chr5:21152449-21153741 REVERSE BAG1_N protein|BAG domain-containing protein, putative, expressed",1.8338398,null,"29.5.9","protein.degradation.AAA type","Os02g0740300","Transcript","highly similar to ( 528) AT4G04180 | Symbols: | AAA-type ATPase family protein | chr4:2020471-2023673 FORWARDweakly similar to ( 120) PRS6B_SOLTU 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) SpoVK AAA RPT1 PRK03992 COG1223 HflB hflB protein|AAA-type ATPase family protein, putative, expressed",-1.6577975,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os04g0567800","Transcript","weakly similar to ( 143) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 117) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975]
[null,20.2,"stress.abiotic","Os04g0626400","Transcript","moderately similar to ( 382) AT3G47860 | Symbols: | apolipoprotein D-related | chr3:17656778-17658269 REVERSE protein|OsCHL Chloroplastic lipocalin, expressed",3.1646068,null,"29.5.9","protein.degradation.AAA type","Os05g0519400","Transcript","nearly identical (1055) AT4G04910 | Symbols: NSF | NSF (N-ethylmaleimide sensitive factor); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding | chr4:2489696-2495666 REVERSEweakly similar to ( 173) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) SpoVK RPT1 PRK03992 AAA HflB hflB COG1223 protein|vesicle-fusing ATPase, putative, expressed",-1.0439752,null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0726300","Transcript","weakly similar to ( 121) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDweakly similar to ( 110) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",3.431485]
[null,20.2,"stress.abiotic","Os04g0619900","Transcript","weakly similar to ( 176) AT5G52060 | Symbols: ATBAG1 | ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding | chr5:21152449-21153741 REVERSEBAG1_N protein|ATBAG1, putative, expressed",1.5734392,null,"29.5.9","protein.degradation.AAA type","Os01g0297200","Transcript","moderately similar to ( 367) AT3G28580 | Symbols: | AAA-type ATPase family protein | chr3:10715736-10717238 FORWARD protein|ATPase, putative, expressed",-1.89193,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0220400","Transcript","protein|GATA zinc finger domain containing protein, expressed",1.3303136]
[null,20.2,"stress.abiotic","Os05g0220100","Transcript","moderately similar to ( 421) AT1G16560 | Symbols: | Per1-like family protein | chr1:5669234-5670343 FORWARD Per1 PER1 protein|per1-like family protein, putative, expressed",-1.1220307,null,"29.5.11","protein.degradation.ubiquitin","Os02g0504500","Transcript","moderately similar to ( 314) AT1G04850 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE PUB protein|ZOS2-07 - C2H2 zinc finger protein, expressed",-0.99577045,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0155400","Transcript","protein|GATA zinc finger domain containing protein, expressed",2.987538]
[null,20.2,"stress.abiotic","Os02g0204400","Transcript","highly similar to ( 708) AT3G15620 | Symbols: UVR3 | UVR3 (UV REPAIR DEFECTIVE 3); DNA (6-4) photolyase | chr3:5294201-5296548 REVERSEweakly similar to ( 133) PHR1_SINAL Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) FAD_binding_7 PhrB PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",2.474655,null,"29.5.11","protein.degradation.ubiquitin","Os04g0577000","Transcript","moderately similar to ( 300) AT2G21270 | Symbols: | ubiquitin fusion degradation UFD1 family protein | chr2:9107841-9110012 FORWARD UFD1 UFD1 protein|ubiquitin fusion degradation protein, putative, expressed",-1.5380398,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0567900","Transcript","very weakly similar to (95.1) AT2G18380 | Symbols: | transcription factor | chr2:7982868-7984017 REVERSE protein|GATA zinc finger domain containing protein, expressed",-1.055427]
[null,"20.2.1","stress.abiotic.heat","Os02g0217900","Transcript","very weakly similar to (96.3) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 104) HSP21_PEA 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) HSP20 protein|hsp20/alpha crystallin family protein, putative, expressed",-3.372493,null,"29.5.11","protein.degradation.ubiquitin","Os06g0283400","Transcript","highly similar to ( 748) AT2G03890 | Symbols: | phosphatidylinositol 3- and 4-kinase family protein | chr2:1186199-1188151 FORWARD PI3_PI4_kinase protein|phosphatidylinositol 3- and 4-kinase family protein, putative, expressed",0.96081764,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os06g0571800","Transcript","very weakly similar to (86.7) AT5G56860 | Symbols: GNC | GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor | chr5:22989630-22991351 REVERSE protein|GATA zinc finger domain containing protein, expressed",3.0469806]
[null,"20.2.1","stress.abiotic.heat","Os02g0526400","Transcript","highly similar to ( 855) AT5G51070 | Symbols: ERD1, CLPD | ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr5:20764479-20768481 FORWARDhighly similar to ( 647) CLPC_PEA ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) clpA clpC PRK10865 clpA AAA_2 protein|ERD1 protein, chloroplast precursor, putative, expressed",-2.2417166,null,"29.5.11","protein.degradation.ubiquitin","Os08g0526700","Transcript","moderately similar to ( 218) AT1G04850 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE PUB protein|ubiquitin-associated protein, putative, expressed",1.2818085,null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0806400","Transcript","weakly similar to ( 131) AT3G54810 | Symbols: BME3-ZF, BME3 | zinc finger (GATA type) family protein | chr3:20296957-20298236 FORWARD protein|GATA zinc finger domain containing protein, expressed",-1.787879]
[null,"20.2.1","stress.abiotic.heat","Os01g0875700","Transcript","moderately similar to ( 216) AT3G08910 | Symbols: | DNAJ heat shock protein, putative | chr3:2710402-2711811 REVERSEvery weakly similar to (90.5) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ protein|dnaJ domain containing protein, expressed",2.6231723,null,"29.5.11","protein.degradation.ubiquitin","Os01g0962400","Transcript","weakly similar to ( 141) AT1G77710 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 170 Blast hits to 170 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). | chr1:29206750-29207895 FORWARDweakly similar to ( 150) UFM1_ORYSA Probable ubiquitin-fold modifier 1 precursor - Oryza sativa (Rice) Ufm1 UPF0185 protein|ubiquitin-fold modifier 1 precursor, putative, expressed",-1.1963295,null,"27.3.10","RNA.regulation of transcription.C2C2(Zn) YABBY family","Os07g0160100","Transcript","weakly similar to ( 141) AT1G08465 | Symbols: YAB2 | YAB2 (YABBY2); transcription factor | chr1:2676033-2679382 FORWARDmoderately similar to ( 276) YAB1_ORYSA Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice)YABBY protein|YABBY domain containing protein, putative, expressed",2.8481522]
[null,"20.2.1","stress.abiotic.heat","Os01g0180800","Transcript","nearly identical (1130) AT1G79920 | Symbols: | ATP binding | chr1:30058935-30062224 REVERSEmoderately similar to ( 273) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 DnaK dnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2255234,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os01g0918200","Transcript","weakly similar to ( 144) AT5G55160 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | chr5:22383747-22384772 REVERSEweakly similar to ( 148) SMT3_ORYSA Ubiquitin-like protein SMT3 - Oryza sativa (Rice) Sumo SMT3 protein|ubiquitin family domain containing protein, expressed",1.0638914,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0871200","Transcript","moderately similar to ( 436) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS1-18 - C2H2 zinc finger protein, expressed",-1.065425]
[null,"20.2.1","stress.abiotic.heat","Os01g0702500","Transcript","moderately similar to ( 387) AT2G21510 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:9210841-9212699 REVERSEmoderately similar to ( 270) DHR25_ORYSA Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1) - Oryza sativa (Rice) DnaJ Dehydrin DnaJ DnaJ protein|dehydrin family protein, expressed",1.8170567,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os09g0420800","Transcript","moderately similar to ( 239) AT1G31340 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1 (RELATED TO UBIQUITIN 1); protein binding | chr1:11218076-11219417 REVERSEweakly similar to ( 137) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin Nedd8 UBQ ubiquitin UBL protein|ubiquitin family protein, putative, expressed",-1.4746151,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0195000","Transcript","moderately similar to ( 308) AT1G55110 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding | chr1:20560406-20562625 REVERSE protein|ZOS1-04 - C2H2 zinc finger protein, expressed",-0.9494095]
[null,"20.2.1","stress.abiotic.heat","Os01g0136100","Transcript","weakly similar to ( 165) AT5G59720 | Symbols: HSP18.2 | HSP18.2 (heat shock protein 18.2) | chr5:24062632-24063117 FORWARDmoderately similar to ( 224) HSP11_ORYSA 16.9 kDa class I heat shock protein 1 - Oryza sativa (Rice) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",0.9654362,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os02g0597700","Transcript","weakly similar to ( 145) AT5G14360 | Symbols: | ubiquitin family protein | chr5:4631038-4631641 FORWARDBAG1_N protein|ubiquitin family protein, putative, expressed",1.7427479,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0951100","Transcript","moderately similar to ( 414) AT3G07940 | Symbols: | zinc finger and C2 domain protein, putative | chr3:2529542-2531368 FORWARD ArfGap ArfGap COG5347 C2 C2 protein|stromal membrane-associated protein, putative, expressed",3.5703247]
[null,"20.2.1","stress.abiotic.heat","Os02g0115900","Transcript","highly similar to ( 992) AT5G42020 | Symbols: BIP | BIP2; ATP binding | chr5:16807697-16810480 REVERSEnearly identical (1068) BIP3_MAIZE Luminal-binding protein 3 precursor (BiP3) - Zea mays (Maize) HSP70 dnaK DnaK dnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.0845118,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os09g0407900","Transcript","highly similar to ( 693) AT4G22285 | Symbols: | ubiquitin thiolesterase/ zinc ion binding | chr4:11779063-11781898 REVERSE Peptidase_C19M UCH Peptidase_C19 Peptidase_C19E Peptidase_C19D Peptidase_C19R protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed",-1.1218462,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0572900","Transcript","moderately similar to ( 220) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS2-11 - C2H2 zinc finger protein, expressed",-1.0505309]
[null,"20.2.1","stress.abiotic.heat","Os12g0514500","Transcript","highly similar to ( 979) AT3G07770 | Symbols: | ATP binding | chr3:2479611-2483970 FORWARDhighly similar to ( 516) HSP83_IPONI Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PRK05218 HtpG HSP90 protein|heat shock protein, putative, expressed",-1.598486,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os03g0234200","Transcript","moderately similar to ( 231) AT3G52590 | Symbols: UBQ1, EMB2167, ERD16, HAP4 | UBQ1 (UBIQUITIN EXTENSION PROTEIN 1); protein binding / structural constituent of ribosome | chr3:19505668-19506681 FORWARDweakly similar to ( 143) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin UBQ Nedd8 ubiquitin UBL Ribosomal_L40e protein|ubiquitin fusion protein, putative, expressed",-0.94750816,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0198300","Transcript","moderately similar to ( 416) AT4G21160 | Symbols: ZAC | ZAC; ARF GTPase activator/ phospholipid binding | chr4:11284694-11286532 FORWARD ArfGap ArfGap COG5347 C2 C2 C2 protein|stromal membrane-associated protein, putative, expressed",1.8940853]
[null,"20.2.1","stress.abiotic.heat","Os01g0606900","Transcript","weakly similar to ( 120) AT1G71000 | Symbols: | heat shock protein binding | chr1:26769336-26770111 REVERSE DnaJ DnaJ protein|heat shock protein DnaJ, putative, expressed",-1.5562181,null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os06g0650100","Transcript","moderately similar to ( 236) AT1G31340 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1 (RELATED TO UBIQUITIN 1); protein binding | chr1:11218076-11219417 REVERSEweakly similar to ( 135) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin Nedd8 UBQ ubiquitin UBL protein|ubiquitin family protein, putative, expressed",-0.9939006,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os03g0279700","Transcript","very weakly similar to (97.4) AT3G53600 | Symbols: | zinc finger (C2H2 type) family protein | chr3:19875532-19876059 FORWARD protein|ZOS3-09 - C2H2 zinc finger protein, expressed",1.7891141]
[null,"20.2.1","stress.abiotic.heat","Os02g0181900","Transcript","nearly identical (1317) AT2G25140 | Symbols: HSP98.7, CLPB-M, CLPB4 | CLPB4 (CASEIN LYTIC PROTEINASE B4); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr2:10697877-10701998 REVERSEhighly similar to ( 719) HS101_ORYSA Heat shock protein 101 - Oryza sativa (Rice) clpA PRK10865 clpC clpA AAA_2 protein|chaperone protein clpB 1, putative, expressed",-2.0256364,null,"29.5.11.2","protein.degradation.ubiquitin.E1","Os11g0497000","Transcript","moderately similar to ( 397) AT4G24940 | Symbols: SAE1A, AT-SAE1-1, ATSAE1A | SAE1A (SUMO-ACTIVATING ENZYME 1A); SUMO activating enzyme | chr4:12823651-12825971 FORWARDvery weakly similar to (92.0) UBE11_WHEAT Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) Aos1_SUMO Ube1_repeat1 E1-1_like APPBP1_RUB ThiF ThiF_MoeB_HesA_family protein|ThiF family domain containing protein, putative, expressed",-1.0245605,null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0715000","Transcript","moderately similar to ( 340) AT5G20220 | Symbols: | zinc knuckle (CCHC-type) family protein | chr5:6822208-6825771 FORWARD protein|zinc knuckle domain containing protein, expressed",1.0285195]
[null,"20.2.1","stress.abiotic.heat","Os02g0464900","Transcript","moderately similar to ( 219) AT5G57130 | Symbols: | protein binding | chr5:23145291-23149395 FORWARD protein|ATP binding, related, putative, expressed",1.4324527,null,"29.5.11.2","protein.degradation.ubiquitin.E1","Os02g0506500","Transcript","highly similar to ( 521) AT1G05350 | Symbols: | thiF family protein | chr1:1560891-1564005 REVERSE ThiF_MoeB_HesA_family ThiF PRK05690 ThiF PRK08762 PRK08644 PRK12475 Uba2_SUMO E1_enzyme_family PRK07688 YgdL_like E1-2_like PRK08328 PRK05600 E1_ThiF_like COG1179 protein|ThiF family domain containing protein, putative, expressed",-1.0128212,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0917400","Transcript","moderately similar to ( 309) AT3G02830 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARDhighly similar to ( 592) ZFNL2_ORYSA Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed",1.7494059]
[null,"20.2.1","stress.abiotic.heat","Os08g0250900","Transcript","highly similar to ( 524) AT5G57710 | Symbols: | heat shock protein-related | chr5:23384794-23388052 FORWARD clpA protein|heat shock protein-related, putative, expressed",-1.0348444,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os05g0460200","Transcript","moderately similar to ( 244) AT3G46460 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase | chr3:17096120-17097315 REVERSEmoderately similar to ( 240) UBC7_WHEAT Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-0.9605363,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os07g0568300","Transcript","moderately similar to ( 361) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-0.9563233]
[null,"20.2.1","stress.abiotic.heat","Os01g0184100","Transcript","weakly similar to ( 133) AT5G12020 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | chr5:3882409-3882876 REVERSEweakly similar to ( 170) HSP21_MAIZE 17.5 kDa class II heat shock protein - Zea mays (Maize) HSP20 alpha-crystallin-Hsps IbpA protein|hsp20/alpha crystallin family protein, putative, expressed",-1.986811,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os08g0374100","Transcript","moderately similar to ( 275) AT4G36800 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase | chr4:17341237-17342148 REVERSEvery weakly similar to (86.7) UBC2_MEDSA Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-1.0221735,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os12g0515500","Transcript","moderately similar to ( 369) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-1.0432993]
[null,"20.2.1","stress.abiotic.heat","Os03g0293100","Transcript","moderately similar to ( 335) AT3G08970 | Symbols: ATERDJ3A, TMS1 | ATERDJ3A; oxidoreductase | chr3:2737589-2740265 FORWARD DnaJ DnaJ PRK10767 DnaJ SEC63 protein|heat shock protein DnaJ, putative, expressed",1.5868534,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os04g0684800","Transcript","moderately similar to ( 252) AT2G36060 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzyme family protein | chr2:15143012-15143998 REVERSE COG5078 UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-1.6265568,null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0192000","Transcript","moderately similar to ( 241) AT2G19810 | Symbols: | zinc finger (CCCH-type) family protein | chr2:8550419-8551498 FORWARD protein|zinc finger/CCCH transcription factor, putative, expressed",2.8330657]
[null,"20.2.1","stress.abiotic.heat","Os09g0482600","Transcript","nearly identical (1079) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1179) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.0954514,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os03g0651100","Transcript","moderately similar to ( 394) AT3G58460 | Symbols: ATRBL15 | ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15) | chr3:21623374-21626348 REVERSE Rhomboid protein|OsRhmbd9 - Putative Rhomboid homologue, expressed",-1.0198601,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os08g0174500","Transcript","weakly similar to ( 176) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 164) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209]
[null,"20.2.1","stress.abiotic.heat","Os09g0491772","Transcript","highly similar to ( 838) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 840) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA protein|DnaK family protein, putative, expressed",-2.79547,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os04g0580400","Transcript","moderately similar to ( 230) AT3G57870 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | chr3:21428831-21430110 REVERSEweakly similar to ( 117) UBC2_WHEAT Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",2.8872042,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os05g0463800","Transcript","weakly similar to ( 185) AT2G37060 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | chr2:15576336-15577660 FORWARDweakly similar to ( 190) NFYB_MAIZE Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209]
[null,"20.2.1","stress.abiotic.heat","Os11g0703900","Transcript","highly similar to ( 934) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEhighly similar to ( 937) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.2799143,null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os01g0229900","Transcript","weakly similar to ( 124) AT3G15355 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase | chr3:5183858-5186669 FORWARD protein|ubiquitin-conjugating enzyme, putative, expressed",1.1100749,null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os03g0413000","Transcript","weakly similar to ( 194) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 170) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF HHT1 protein|histone-like transcription factor and archaeal histone, putative, expressed",3.2168026]
[null,"20.2.1","stress.abiotic.heat","Os05g0460000","Transcript","nearly identical (1105) AT3G12580 | Symbols: HSP70 | HSP70 (heat shock protein 70); ATP binding | chr3:3991487-3993689 REVERSEnearly identical (1113) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.8242869,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0703300","Transcript","moderately similar to ( 312) AT5G55970 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:22668019-22669312 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.9407415,null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os03g0852300","Transcript","very weakly similar to (82.0) AT1G07980 | Symbols: NF-YC10 | NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | chr1:2473523-2474910 REVERSE protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.1165094]
[null,"20.2.1","stress.abiotic.heat","Os05g0156500","Transcript","moderately similar to ( 496) AT3G62600 | Symbols: ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding | chr3:23151038-23153346 REVERSEweakly similar to ( 173) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ PRK10266 DnaJ_C DnaJ CbpA protein|dnaJ homolog subfamily B member 11 precursor, putative, expressed",-1.0589027,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0525400","Transcript","weakly similar to ( 125) AT3G63530 | Symbols: BB, BB2 | BB (BIG BROTHER); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:23456407-23457787 REVERSE protein|zinc RING finger protein, putative, expressed",1.4093543,null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os06g0667100","Transcript","weakly similar to ( 192) AT1G56170 | Symbols: HAP5B, ATHAP5B, NF-YC2 | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | chr1:21025118-21025717 FORWARD HAP5 protein|core histone H2A/H2B/H3/H4, putative, expressed",-1.2620894]
[null,"20.2.1","stress.abiotic.heat","Os03g0648400","Transcript","highly similar to ( 550) AT3G44110 | Symbols: ATJ3, ATJ | ATJ3; protein binding | chr3:15869179-15871059 REVERSEhighly similar to ( 586) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ_CXXCXGXG DnaJ DnaJ PRK10266 protein|chaperone protein dnaJ, putative, expressed",-1.0908371,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0497600","Transcript","moderately similar to ( 242) AT5G44280 | Symbols: ATRING1A, RING1A | RING1A (RING 1A); protein binding / zinc ion binding | chr5:17836115-17839114 REVERSE protein|zinc finger C3HC4 type family protein, putative, expressed",2.5479977,null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os02g0174000","Transcript","moderately similar to ( 263) AT1G79430 | Symbols: APL, WDY | APL (ALTERED PHLOEM DEVELOPMENT); transcription factor/ transcription regulator | chr1:29877521-29879135 REVERSE protein|Myb transcription factor, putative, expressed",1.1381454]
[null,"20.2.1","stress.abiotic.heat","Os01g0239100","Transcript","moderately similar to ( 373) AT2G20560 | Symbols: | DNAJ heat shock family protein | chr2:8848353-8849815 REVERSEvery weakly similar to (94.7) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ PRK10266 CbpA protein|dnaJ domain containing protein, expressed",-1.1356636,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0790600","Transcript","moderately similar to ( 201) AT2G18650 | Symbols: MEE16 | MEE16 (maternal effect embryo arrest 16); protein binding / zinc ion binding | chr2:8086860-8088131 REVERSE protein|RING-H2 finger protein, putative, expressed",1.1699792,null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os04g0665600","Transcript","weakly similar to ( 126) AT5G06800 | Symbols: | myb family transcription factor | chr5:2103374-2105680 FORWARD protein|Myb-like DNA-binding domain containing protein, putative, expressed",-1.3667952]
[null,"20.2.1","stress.abiotic.heat","Os09g0482100","Transcript","nearly identical (1062) AT5G56030 | Symbols: HSP81-2, ERD8, HSP90.2 | HSP81-2 (HEAT SHOCK PROTEIN 81-2); ATP binding | chr5:22686923-22689433 FORWARDnearly identical (1157) HSP83_ORYSA Heat shock protein 81-3 (HSP81-3) (Gravity-specific protein GSC 381) - Oryza sativa (Rice) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2360722,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0639800","Transcript","very weakly similar to (90.5) AT4G27470 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr4:13735576-13736307 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",2.0388052,null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os11g0160600","Transcript","weakly similar to ( 114) AT4G08250 | Symbols: | scarecrow transcription factor family protein | chr4:5196787-5198238 FORWARDweakly similar to ( 120) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|nodulation-signaling pathway 2 protein, putative, expressed",1.1880302]
[null,"20.2.1","stress.abiotic.heat","Os06g0716700","Transcript","nearly identical (1050) AT4G24190 | Symbols: SHD | SHD (SHEPHERD); ATP binding / unfolded protein binding | chr4:12551902-12555851 REVERSEnearly identical (1162) ENPL_HORVU Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) HSP90 PRK05218 HtpG protein|heat shock protein, putative, expressed",-1.2462469,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0389600","Transcript","moderately similar to ( 256) AT5G45290 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:18350011-18352092 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",1.657834,null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os05g0500600","Transcript","moderately similar to ( 281) AT3G49950 | Symbols: | scarecrow transcription factor family protein | chr3:18522570-18523802 FORWARDweakly similar to ( 126) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|MONOCULM 1, putative, expressed",2.6618528]
[null,"20.2.1","stress.abiotic.heat","Os01g0840100","Transcript","nearly identical (1024) AT5G02500 | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding | chr5:554055-556334 REVERSEnearly identical (1038) HSP7C_PETHY Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) HSP70 dnaK DnaK dnaK hscA hscA protein|DnaK family protein, putative, expressed",-1.5626196,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os04g0586700","Transcript","very weakly similar to (87.0) AT3G60220 | Symbols: ATL4 | ATL4; protein binding / zinc ion binding | chr3:22254790-22255794 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",1.9383358,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0198600","Transcript","very weakly similar to (99.0) AT4G36740 | Symbols: HB-5, ATHB40 | ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor | chr4:17314649-17316314 REVERSE protein|homeobox domain containing protein, expressed",1.6825858]
[null,"20.2.1","stress.abiotic.heat","Os08g0452900","Transcript","very weakly similar to (85.9) AT3G14200 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr3:4712881-4714361 REVERSEDnaJ protein|heat shock protein DnaJ, putative, expressed",-1.6592275,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0759400","Transcript","weakly similar to ( 134) AT2G35000 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:14751809-14752945 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",-1.3101403,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os04g0548700","Transcript","weakly similar to ( 184) AT4G16780 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | chr4:9449291-9450604 FORWARD protein|homeobox associated leucine zipper, putative, expressed",2.2563107]
[null,"20.2.1","stress.abiotic.heat","Os03g0113700","Transcript","highly similar to ( 956) AT5G09590 | Symbols: MTHSC70-2, HSC70-5 | MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | chr5:2975721-2978508 FORWARDhighly similar to ( 988) HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) dnaK HSP70 dnaK DnaK hscA hscA PRK11678 protein|DnaK family protein, putative, expressed",-1.2001644,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0434900","Transcript","weakly similar to ( 108) AT3G14250 | Symbols: | protein binding / zinc ion binding | chr3:4745963-4746958 REVERSE protein|protein binding protein, putative, expressed",-1.0500418,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os05g0455200","Transcript","moderately similar to ( 216) AT5G02030 | Symbols: LSN, PNY, HB-6, BLR, RPL, BLH9, VAN | RPL (REPLUMLESS); DNA binding / sequence-specific DNA binding / transcription factor | chr5:395754-398872 FORWARD POX POX protein|homeodomain protein, putative, expressed",1.769432]
[null,"20.2.1","stress.abiotic.heat","Os03g0261500","Transcript","moderately similar to ( 215) AT5G22080 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7310600-7313540 REVERSE protein|heat shock protein DnaJ, putative, expressed",3.2925575,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0419500","Transcript","moderately similar to ( 226) AT3G53690 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:19898997-19900044 REVERSE protein|protein binding protein, putative, expressed",0.97944754,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os10g0480200","Transcript","highly similar to ( 693) AT5G60690 | Symbols: REV, IFL, IFL1 | REV (REVOLUTA); DNA binding / lipid binding / transcription factor | chr5:24397734-24401933 FORWARDSTART START START protein|START domain containing protein, expressed",0.966623]
[null,"20.2.1","stress.abiotic.heat","Os06g0474800","Transcript","very weakly similar to (87.8) AT5G23240 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:7826857-7828534 REVERSE protein|expressed protein",-1.9624877,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0452800","Transcript","weakly similar to ( 167) AT5G05830 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:1755910-1756825 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.3361411,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os06g0140700","Transcript","weakly similar to ( 155) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE protein|homeobox associated leucine zipper, putative, expressed",1.2395021]
[null,"20.2.1","stress.abiotic.heat","Os02g0656500","Transcript","moderately similar to ( 461) AT5G22060 | Symbols: ATJ2, J2 | ATJ2; protein binding | chr5:7303798-7305668 REVERSEmoderately similar to ( 476) DNJH_CUCSA DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) DnaJ PRK10767 DnaJ DnaJ_CXXCXGXG DnaJ protein|chaperone protein dnaJ, putative, expressed",-1.1058906,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os04g0508800","Transcript","highly similar to ( 576) AT2G38970 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:16274135-16276651 FORWARDvWA_C3HC4_type vWA_subgroup vWA_interalpha_trypsin_inhibitor VWA vWFA VWA protein|zinc finger family protein, putative, expressed",-1.137682,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os08g0481400","Transcript","weakly similar to ( 144) AT5G65310 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor | chr5:26102457-26103854 REVERSE protein|homeobox associated leucine zipper, putative, expressed",0.97592384]
[null,"20.2.1","stress.abiotic.heat","Os02g0782500","Transcript","very weakly similar to ( 100) AT1G54050 | Symbols: | 17.4 kDa class III heat shock protein (HSP17.4-CIII) | chr1:20179558-20180122 REVERSEvery weakly similar to (83.2) HSP21_IPONI 17.2 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) IbpA HSP20 alpha-crystallin-Hsps protein|hsp20/alpha crystallin family protein, putative, expressed",-2.0676515,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0657100","Transcript","highly similar to ( 689) AT1G20780 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1 (SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1); ubiquitin-protein ligase | chr1:7217812-7220609 FORWARDvery weakly similar to (80.1) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox protein|armadillo/beta-catenin repeat family protein, putative, expressed",-1.0264767,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os09g0447000","Transcript","weakly similar to ( 176) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE HALZ protein|homeobox associated leucine zipper, putative, expressed",-1.1042371]
[null,"20.2.1","stress.abiotic.heat","Os03g0159900","Transcript","very weakly similar to (85.1) AT3G22530 | Symbols: | unknown protein | chr3:7977774-7978370 REVERSE protein|expressed protein",1.0589358,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0732200","Transcript","highly similar to ( 523) AT1G23030 | Symbols: | armadillo/beta-catenin repeat family protein / U-box domain-containing protein | chr1:8156745-8158842 FORWARDmoderately similar to ( 402) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) Ubox U-box protein|spotted leaf 11, putative, expressed",2.6973565,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0123500","Transcript","moderately similar to ( 368) AT1G62990 | Symbols: KNAT7, IXR11 | KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor | chr1:23337468-23340348 FORWARDmoderately similar to ( 360) HD1_BRANA Homeobox protein HD1 - Brassica napus (Rape) protein|homeobox protein knotted-1, putative, expressed",3.811927]
[null,"20.2.2","stress.abiotic.cold","Os05g0566800","Transcript","weakly similar to ( 154) AT1G29395 | Symbols: COR414-TM1 | COR414-TM1 | chr1:10288345-10289539 REVERSEWCOR413 protein|cold acclimation protein WCOR413, putative, expressed",1.4706432,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0479100","Transcript","weakly similar to ( 194) AT2G17730 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:7704142-7705312 FORWARD protein|zinc finger, C3HC4 type, domain containing protein, expressed",1.1537548,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0124000","Transcript","moderately similar to ( 241) AT5G41410 | Symbols: BEL1 | BEL1 (BELL 1); DNA binding / protein binding / transcription factor | chr5:16580424-16583770 FORWARD POX POX protein|homeobox domain containing protein, expressed",-1.0684227]
[null,"20.2.3","stress.abiotic.drought/salt","Os05g0217800","Transcript","weakly similar to ( 156) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEweakly similar to ( 106) EA30_VICFA Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean)BURP protein|BURP domain containing protein, expressed",4.3420224,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0580800","Transcript","weakly similar to ( 121) AT3G48070 | Symbols: | protein binding / zinc ion binding | chr3:17750878-17752297 FORWARD protein|protein binding protein, putative, expressed",0.9842709,null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os01g0788800","Transcript","moderately similar to ( 326) AT4G21750 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA binding / sequence-specific DNA binding / transcription factor | chr4:11556965-11560243 FORWARDSTART START protein|Homeobox domain containing protein, expressed",1.2033843]
[null,"20.2.3","stress.abiotic.drought/salt","Os01g0828300","Transcript","highly similar to ( 712) AT2G40280 | Symbols: | dehydration-responsive family protein | chr2:16825707-16828300 REVERSEDUF248 protein|methyltransferase, putative, expressed",-1.658373,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0439000","Transcript","very weakly similar to (80.1) AT3G18773 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:6466304-6466966 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-1.8216048,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046]
[null,"20.2.3","stress.abiotic.drought/salt","Os05g0215000","Transcript","weakly similar to ( 115) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",5.4819794,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os11g0116200","Transcript","weakly similar to ( 111) AT5G01880 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:339017-339496 FORWARD protein|LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed",2.6963356,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os05g0530400","Transcript","weakly similar to ( 197) AT4G18880 | Symbols: AT-HSFA4A, HSF A4A | AT-HSFA4A; DNA binding / transcription factor | chr4:10347769-10349051 REVERSE HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.9081851]
[null,"20.2.3","stress.abiotic.drought/salt","Os03g0673800","Transcript","highly similar to ( 509) AT1G58520 | Symbols: RXW8 | hydrolase, acting on ester bonds / lipase | chr1:21729913-21731344 FORWARD DUF221 COG5594 protein|RXW8, putative, expressed",2.217145,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0741700","Transcript","moderately similar to ( 239) AT2G30580 | Symbols: DRIP2 | DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr2:13026444-13030363 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-0.99910975,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0749300","Transcript","moderately similar to ( 237) AT5G45710 | Symbols: AT-HSFA4C, RHA1, HSFA4C | RHA1 (ROOT HANDEDNESS 1); DNA binding / transcription factor | chr5:18541576-18542706 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.2446251]
[null,"20.2.3","stress.abiotic.drought/salt","Os03g0345300","Transcript","moderately similar to ( 305) AT3G62730 | Symbols: | unknown protein | chr3:23208003-23209436 REVERSE protein|desiccation-related protein PCC13-62 precursor, putative, expressed",1.5497125,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0303600","Transcript","weakly similar to ( 124) AT2G01275 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:142610-143809 REVERSE protein|zinc finger, C3HC4 type, putative, expressed",2.591104,null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0733200","Transcript","weakly similar to ( 179) AT3G24520 | Symbols: AT-HSFC1, HSFC1 | AT-HSFC1; DNA binding / transcription factor | chr3:8941455-8942531 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.5364038]
[null,"20.2.3","stress.abiotic.drought/salt","Os01g0233000","Transcript","weakly similar to ( 139) SRS1_ORYSA Salt-stress root protein RS1 - Oryza sativa (Rice) protein|salt stress root protein RS1, putative, expressed",1.3461937,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0894600","Transcript","weakly similar to ( 118) AT2G02960 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:862346-863980 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",2.6284146,null,"27.3.24","RNA.regulation of transcription.MADS box transcription factor family","Os06g0712700","Transcript","weakly similar to ( 179) AT3G54340 | Symbols: AP3, ATAP3 | AP3 (APETALA 3); DNA binding / transcription factor | chr3:20119428-20121087 REVERSEmoderately similar to ( 402) MAD16_ORYSA MADS-box transcription factor 16 (OsMADS16) (Protein SUPERWOMAN1) (Protein APETALA3-like) - Oryza sativa (Rice) MADS_MEF2_like MADS MADS K-box MADS_SRF_like SRF-TF protein|OsMADS16 - MADS-box family gene with MIKCc type-box, expressed",1.468964]
[null,"20.2.3","stress.abiotic.drought/salt","Os02g0675700","Transcript","highly similar to ( 773) AT4G00750 | Symbols: | dehydration-responsive family protein | chr4:314405-317507 FORWARDDUF248 protein|dehydration response related protein, putative, expressed",3.8019972,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0901000","Transcript","highly similar to ( 764) AT1G27910 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45); ubiquitin-protein ligase | chr1:9720962-9723975 REVERSEweakly similar to ( 113) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox U-box protein|armadillo/beta-catenin repeat family protein, putative, expressed",1.5737334,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927]
[null,"20.2.3","stress.abiotic.drought/salt","Os06g0687450","Transcript","highly similar to ( 831) AT5G14430 | Symbols: | dehydration-responsive protein-related | chr5:4653092-4655741 FORWARDDUF248 protein|methyltransferase, putative, expressed",1.2349845,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0476700","Transcript","moderately similar to ( 378) AT5G01830 | Symbols: | armadillo/beta-catenin repeat family protein / U-box domain-containing protein | chr5:320983-323007 FORWARDweakly similar to ( 161) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox U-box protein|spotted leaf 11, putative, expressed",-1.4166422,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0769900","Transcript","moderately similar to ( 437) AT1G05750 | Symbols: PDE247, CLB19 | PDE247 (pigment defective 247) | chr1:1721523-1723025 FORWARDvery weakly similar to (99.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.1371251]
[null,"20.2.3","stress.abiotic.drought/salt","Os05g0107900","Transcript","Di19 protein|drought induced 19 protein, putative, expressed",-1.3337746,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0770600","Transcript","moderately similar to ( 234) AT1G68140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 157 Blast hits to 148 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:25539410-25540414 REVERSEDUF1644 protein|expressed protein",0.99462175,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0552300","Transcript","highly similar to ( 946) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEweakly similar to ( 128) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.8654522]
[null,"20.2.3","stress.abiotic.drought/salt","Os06g0240050","Transcript","weakly similar to ( 120) AT5G25610 | Symbols: RD22 | RD22; nutrient reservoir | chr5:8914498-8916684 REVERSEBURP protein|BURP domain containing protein, expressed",1.3349804,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0526600","Transcript","weakly similar to ( 142) AT3G61550 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:22776444-22777082 FORWARD protein|RING-H2 finger protein ATL2M, putative, expressed",-1.0025091,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0844000","Transcript","moderately similar to ( 445) AT2G27610 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:11783927-11786533 REVERSEweakly similar to ( 127) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.7728684]
[null,"20.2.4","stress.abiotic.touch/wounding","Os03g0299600","Transcript","very weakly similar to (83.6) AT3G10985 | Symbols: SAG20, WI12, ATWI-12 | SAG20 (SENESCENCE ASSOCIATED GENE 20) | chr3:3442776-3443108 FORWARDvery weakly similar to (85.1) WUN1_SOLTU Wound-induced protein 1 - Solanum tuberosum (Potato)WI12 protein|wound-induced protein WI12, putative, expressed",1.8004555,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os06g0693700","Transcript","moderately similar to ( 231) AT4G31410 | Symbols: | unknown protein | chr4:15244259-15245474 FORWARDDUF1644 protein|expressed protein",-1.0264645,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0241800","Transcript","highly similar to ( 666) AT3G49140 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1). | chr3:18213981-18217848 REVERSEvery weakly similar to (95.1) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.5820802]
[null,"20.2.99","stress.abiotic.unspecified","Os08g0460000","Transcript","moderately similar to ( 217) AT5G20630 | Symbols: GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase | chr5:6975315-6975950 REVERSEmoderately similar to ( 228) ABP20_PRUPE Auxin-binding protein ABP20 precursor - Prunus persica (Peach)Cupin_1 protein|Cupin domain containing protein, expressed",7.935741,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0618000","Transcript","very weakly similar to (87.4) AT1G53820 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr1:20091491-20092423 FORWARDvery weakly similar to (87.8) EL5_ORYSA E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) protein|RING finger protein, putative, expressed",2.203785,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0163600","Transcript","moderately similar to ( 479) AT4G15720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:8949569-8951419 FORWARD protein|tetratricopeptide-like helical, putative, expressed",-1.0337161]
[null,"20.2.99","stress.abiotic.unspecified","Os01g0249200","Transcript","moderately similar to ( 248) AT3G62020 | Symbols: GLP10 | GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | chr3:22971443-22972192 REVERSEmoderately similar to ( 255) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.9880025,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0802000","Transcript","moderately similar to ( 202) AT2G40830 | Symbols: RHC1A | RHC1A; protein binding / zinc ion binding | chr2:17043642-17044628 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.3565899,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0191500","Transcript","highly similar to ( 536) AT1G59720 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTION28); endonuclease | chr1:21939868-21941784 REVERSE protein|pentatricopeptide, putative, expressed",4.0154567]
[null,"20.2.99","stress.abiotic.unspecified","Os01g0875300","Transcript","moderately similar to ( 203) AT1G44760 | Symbols: | universal stress protein (USP) family protein | chr1:16896894-16898427 REVERSE protein|universal stress protein domain containing protein, putative, expressed",3.2292225,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0149700","Transcript","very weakly similar to (87.8) AT5G43420 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:17451790-17452917 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",2.9515336,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0114150","Transcript","weakly similar to ( 149) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.5206258]
[null,"20.2.99","stress.abiotic.unspecified","Os09g0568700","Transcript","weakly similar to ( 111) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEweakly similar to ( 115) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",-1.3166856,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0468300","Transcript","weakly similar to ( 160) AT3G05200 | Symbols: ATL6 | ATL6; protein binding / zinc ion binding | chr3:1477377-1478573 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-2.1886747,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0172600","Transcript","highly similar to ( 677) AT5G03800 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE protein|pentatricopeptide, putative, expressed",1.0694861]
[null,"20.2.99","stress.abiotic.unspecified","Os01g0284500","Transcript","moderately similar to ( 241) AT1G02335 | Symbols: GL22 | GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / nutrient reservoir | chr1:463979-464876 REVERSEmoderately similar to ( 240) NEC1_NICPL Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco)Cupin_1 protein|Cupin domain containing protein, expressed",3.4000788,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os06g0102700","Transcript","highly similar to ( 607) AT3G54850 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein ligase | chr3:20321524-20323848 FORWARDhighly similar to ( 533) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) Ubox U-box protein|spotted leaf 11, putative, expressed",-1.0805988,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0636900","Transcript","moderately similar to ( 467) AT2G29760 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12712884-12715100 FORWARDvery weakly similar to (99.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.0778502]
[null,"20.2.99","stress.abiotic.unspecified","Os02g0705400","Transcript","weakly similar to ( 162) AT2G21620 | Symbols: RD2 | RD2 | chr2:9248749-9249986 FORWARD protein|universal stress protein domain containing protein, putative, expressed",-1.4217519,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os08g0445000","Transcript","weakly similar to ( 199) AT4G30400 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr4:14867068-14868486 FORWARD protein|RING-H2 finger protein, putative, expressed",4.540898,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0697500","Transcript","highly similar to ( 546) AT1G31920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:11461864-11463684 REVERSEvery weakly similar to (80.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1643367]
[null,"20.2.99","stress.abiotic.unspecified","Os08g0189200","Transcript","moderately similar to ( 230) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",5.8566914,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0908700","Transcript","highly similar to ( 534) AT5G14420 | Symbols: RGLG2 | RGLG2 (RING domain Ligase2); ubiquitin-protein ligase | chr5:4648355-4650563 REVERSE vWA_copine_like Copine protein|copine, putative, expressed",-0.9942935,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0274800","Transcript","moderately similar to ( 224) AT1G69560 | Symbols: MYB105, AtMYB105 | MYB105 (myb domain protein 105); DNA binding / transcription factor | chr1:26157755-26158906 FORWARDweakly similar to ( 102) GAM1_ORYSA Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) REB1 protein|MYB family transcription factor, putative, expressed",-0.993018]
[null,"20.2.99","stress.abiotic.unspecified","Os06g0114500","Transcript","weakly similar to ( 116) AT1G01170 | Symbols: | ozone-responsive stress-related protein, putative | chr1:74105-74443 REVERSEDUF1138 protein|ATOZI1, putative, expressed",1.5791136,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0411200","Transcript","weakly similar to ( 103) AT3G05870 | Symbols: APC11 | APC11; protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:1754463-1754802 FORWARD APC11 protein|anaphase-promoting complex subunit 11, putative, expressed",1.1983309,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0128000","Transcript","moderately similar to ( 238) AT1G68320 | Symbols: MYB62, AtMYB62, BW62B, BW62C | MYB62 (myb domain protein 62); DNA binding / transcription factor | chr1:25603842-25604884 FORWARDweakly similar to ( 155) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.60054]
[null,"20.2.99","stress.abiotic.unspecified","Os08g0189300","Transcript","moderately similar to ( 226) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|cupin domain containing protein, expressed",4.864809,null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0232600","Transcript","moderately similar to ( 419) AT5G65920 | Symbols: | U-box domain-containing protein | chr5:26364323-26365657 REVERSEvery weakly similar to (80.5) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox protein|U-box domain containing protein, expressed",1.5340596,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0482400","Transcript","moderately similar to ( 483) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSEvery weakly similar to (98.6) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide repeat protein PPR986-12, putative, expressed",3.0890915]
[null,"20.2.99","stress.abiotic.unspecified","Os04g0465600","Transcript","weakly similar to ( 125) AT1G24020 | Symbols: MLP423 | MLP423 (MLP-LIKE PROTEIN 423) | chr1:8500653-8501458 REVERSEBet_v_I protein|pathogenesis-related Bet v I family protein, putative, expressed",4.388162,null,"29.5.11.4.3.2","protein.degradation.ubiquitin.E3.SCF.FBOX","Os12g0517100","Transcript","moderately similar to ( 312) AT1G80570 | Symbols: | F-box family protein (FBL14) | chr1:30290828-30292231 FORWARD protein|OsFBL60 - F-box domain and LRR containing protein, expressed",1.7258983,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0532900","Transcript","moderately similar to ( 254) AT4G12350 | Symbols: MYB42, AtMYB42 | MYB42 (myb domain protein 42); transcription factor | chr4:7324912-7326636 FORWARDmoderately similar to ( 271) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) protein|MYB family transcription factor, putative, expressed",2.1058097]
[null,"20.2.99","stress.abiotic.unspecified","Os08g0189900","Transcript","moderately similar to ( 239) AT3G05950 | Symbols: | germin-like protein, putative | chr3:1781130-1781964 REVERSEweakly similar to ( 197) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.2424258,null,"29.5.11.4.3.2","protein.degradation.ubiquitin.E3.SCF.FBOX","Os01g0881900","Transcript","moderately similar to ( 392) AT1G21410 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD protein|F-box/LRR-repeat protein 2, putative, expressed",2.5102894,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023]
[null,"20.2.99","stress.abiotic.unspecified","Os10g0371000","Transcript","weakly similar to ( 153) AT4G08685 | Symbols: SAH7 | SAH7 | chr4:5550563-5551259 FORWARDweakly similar to ( 130) PSC13_MAIZE Pollen-specific protein C13 precursor - Zea mays (Maize)Pollen_Ole_e_I protein|POEI24 - Pollen Ole e I allergen and extensin family protein precursor, expressed",3.015258,null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os08g0495500","Transcript","moderately similar to ( 381) AT1G55760 | Symbols: | BTB/POZ domain-containing protein | chr1:20847117-20848507 REVERSE BTB protein|C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed",-0.97141504,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0474051","Transcript","moderately similar to ( 225) AT3G62890 | Symbols: | binding | chr3:23246168-23247973 FORWARD protein|pentatricopeptide, putative, expressed",1.4868604]
[null,"20.2.99","stress.abiotic.unspecified","Os02g0532500","Transcript","moderately similar to ( 222) AT3G10080 | Symbols: | germin-like protein, putative | chr3:3107476-3108159 REVERSEweakly similar to ( 147) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.1768322,null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os03g0792500","Transcript","moderately similar to ( 483) AT3G03740 | Symbols: ATBPM4 | ATBPM4 (BTB-POZ and MATH domain 4); protein binding | chr3:937106-939807 REVERSE MATH BTB protein|MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed",-1.0055532,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0508500","Transcript","moderately similar to ( 204) AT4G13480 | Symbols: AtMYB79 | AtMYB79 (myb domain protein 79); DNA binding / transcription factor | chr4:7836675-7837653 FORWARDweakly similar to ( 157) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.5152645]
[null,"20.2.99","stress.abiotic.unspecified","Os03g0161600","Transcript","very weakly similar to (95.9) AT4G14723 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 130 Blast hits to 130 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:8440167-8440693 FORWARD protein|expressed protein",2.6363022,null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os02g0760600","Transcript","very weakly similar to (88.2) AT5G19000 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding | chr5:6342563-6344641 FORWARD protein|BTB/POZ domain containing protein, putative, expressed",2.5056999,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0193900","Transcript","moderately similar to ( 219) AT3G05380 | Symbols: ALY2, ATALY2 | DNA binding / nucleic acid binding / transcription factor | chr3:1540961-1546139 FORWARD DIRP protein|DIRP family protein, putative, expressed",-1.6069416]
[null,"20.2.99","stress.abiotic.unspecified","Os08g0190100","Transcript","moderately similar to ( 235) AT5G39110 | Symbols: | germin-like protein, putative | chr5:15657802-15658584 REVERSEweakly similar to ( 192) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-2.0081575,null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os10g0435400","Transcript","weakly similar to ( 176) AT5G19000 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding | chr5:6342563-6344641 FORWARDMATH BTB protein|MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed",1.9783186,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579]
[null,"20.2.99","stress.abiotic.unspecified","Os12g0155000","Transcript","moderately similar to ( 206) AT5G38960 | Symbols: | germin-like protein, putative | chr5:15592992-15593783 FORWARDweakly similar to ( 181) GLP1_MESCR Germin-like protein precursor - Mesembryanthemum crystallinum (Common ice plant)Cupin_1 protein|Cupin domain containing protein, expressed",-1.603726,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os08g0529100","Transcript","moderately similar to ( 343) AT3G60820 | Symbols: PBF1 | PBF1; peptidase/ threonine-type endopeptidase | chr3:22472038-22473809 REVERSEmoderately similar to ( 392) PSB1_ORYSA Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Oryza sativa (Rice) proteasome_beta_type_1 proteasome_beta proteasome_protease_HslV PRE1 proteasome_beta_archeal Proteasome proteasome_beta_type_3 Ntn_hydrolase protein|peptidase, T1 family, putative, expressed",-2.2647016,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0685400","Transcript","moderately similar to ( 224) AT4G37780 | Symbols: MYB87, ATMYB87 | MYB87 (MYB DOMAIN PROTEIN 87); DNA binding / transcription factor | chr4:17758404-17759526 REVERSEweakly similar to ( 164) MYB4_ORYSA Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.3034965]
[{"$nulls":8},"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os01g0511300","Transcript","highly similar to ( 542) AT4G19006 | Symbols: | 26S proteasome regulatory subunit, putative (RPN9) | chr4:10409349-10411347 REVERSE protein|proteasome subunit, putative, expressed",-1.0987902,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0634900","Transcript","moderately similar to ( 212) AT5G26660 | Symbols: ATMYB4, ATMYB86 | ATMYB86 (MYB DOMAIN PROTEIN 86); specific transcriptional repressor/ transcription repressor | chr5:9331775-9333044 REVERSEmoderately similar to ( 202) MYB3_HORVU Myb-related protein Hv33 - Hordeum vulgare (Barley) REB1 protein|myb-related protein Hv33, putative, expressed",3.0182467]
[null,21.1,"redox.thioredoxin","Os08g0250700","Transcript","moderately similar to ( 206) AT2G18990 | Symbols: TXND9 | TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG) | chr2:8238851-8239932 REVERSE Phd_like_TxnDC9 Phd_like protein|thioredoxin domain-containing protein 9, putative, expressed",-1.0307056,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os04g0485000","Transcript","highly similar to ( 616) AT4G24820 | Symbols: | 26S proteasome regulatory subunit, putative (RPN7) | chr4:12790471-12792599 REVERSEhighly similar to ( 749) PSMD6_ORYSA 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) RPN7 protein|26S proteasome non-ATPase regulatory subunit 6, putative, expressed",-1.0655257,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0305900","Transcript","moderately similar to ( 212) AT2G47460 | Symbols: MYB12, ATMYB12, PFG1 | MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor | chr2:19476438-19479242 FORWARDmoderately similar to ( 212) MYBP_MAIZE Myb-related protein P - Zea mays (Maize) protein|MYB family transcription factor, putative, expressed",1.7271547]
[null,21.1,"redox.thioredoxin","Os07g0186000","Transcript","very weakly similar to (90.5) AT3G51030 | Symbols: ATTRX1, ATTRX H1 | ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | chr3:18951123-18951955 REVERSEweakly similar to ( 130) TRXH_ORYSA Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) protein|thioredoxin, putative, expressed",-1.968882,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os05g0490800","Transcript","moderately similar to ( 434) AT2G27020 | Symbols: PAG1 | PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase | chr2:11528515-11530858 REVERSEmoderately similar to ( 453) PSA3_ORYSA Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) - Oryza sativa (Rice) proteasome_alpha_type_3 proteasome_alpha PRE1 PRK03996 proteasome_alpha_archeal Proteasome proteasome_alpha_type_1 proteasome_alpha_type_5 proteasome_alpha_type_2 proteasome_protease_HslV proteasome_alpha_type_6 proteasome_alpha_type_4 proteasome_alpha_type_7 Ntn_hydrolase proteasome_beta_archeal proteasome_beta protein|peptidase, T1 family, putative, expressed",-1.3196164,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0470600","Transcript","moderately similar to ( 327) AT5G56110 | Symbols: ATMYB80, ATMYB103, MYB103, MS188 | ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103); DNA binding / transcription factor | chr5:22719191-22720664 FORWARDweakly similar to ( 193) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) REB1 protein|MYB family transcription factor, putative, expressed",1.0198911]
[null,21.1,"redox.thioredoxin","Os11g0528500","Transcript","weakly similar to ( 154) AT5G51010 | Symbols: | rubredoxin family protein | chr5:20744615-20745344 FORWARD protein|rubredoxin family protein, putative, expressed",2.0186002,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os07g0691800","Transcript","highly similar to ( 723) AT4G29040 | Symbols: RPT2a | RPT2a (regulatory particle AAA-ATPase 2a); ATPase | chr4:14312369-14314386 FORWARDhighly similar to ( 759) PRS4_ORYSA 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) RPT1 PRK03992 SpoVK HflB AAA hflB COG1223 protein|26S protease regulatory subunit 4, putative, expressed",-1.0429226,null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292]
[null,21.1,"redox.thioredoxin","Os05g0156300","Transcript","moderately similar to ( 498) AT2G47470 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | chr2:19481503-19483683 FORWARDmoderately similar to ( 498) PDIA6_MEDSA Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) PDI_a_ERp38 PDI_a_family Thioredoxin PDI_a_PDI_a'_C PDI_a_P5 PDI_a_ERp46 PDI_a_MPD1_like ERp29 PDI_a_PDIR PDI_a_ERdj5_C PDI_a_QSOX ERp29c PDI_a_TMX3 PDI_a_ERp44 TRX_family protein|OsPDIL2-1 protein disulfide isomerase PDIL2-1, expressed",-1.3293839,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os01g0267200","Transcript","highly similar to ( 535) AT5G23540 | Symbols: | 26S proteasome regulatory subunit, putative | chr5:7938109-7939339 FORWARD JAB_MPN Mov34 COG1310 protein|26S proteasome non-ATPase regulatory subunit 14, putative, expressed",-0.9604581,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os10g0562100","Transcript","weakly similar to ( 108) AT2G38090 | Symbols: | myb family transcription factor | chr2:15945278-15946775 FORWARD protein|MYB family transcription factor, putative, expressed",-1.7148021]
[null,21.1,"redox.thioredoxin","Os09g0559600","Transcript","protein|thioredoxin, putative, expressed",-1.6462044,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os03g0214600","Transcript","highly similar to ( 567) AT4G19006 | Symbols: | 26S proteasome regulatory subunit, putative (RPN9) | chr4:10409349-10411347 REVERSE protein|proteasome subunit, putative, expressed",-0.9739596,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os05g0589400","Transcript","weakly similar to ( 124) AT5G47390 | Symbols: | myb family transcription factor | chr5:19227001-19228546 FORWARD protein|Myb transcription factor, putative, expressed",5.3580303]
[null,21.1,"redox.thioredoxin","Os01g0963400","Transcript","weakly similar to ( 173) AT1G76760 | Symbols: ATY1, TRX-Y1 | ATY1 (ARABIDOPSIS THIOREDOXIN Y1); electron carrier/ protein disulfide oxidoreductase | chr1:28811873-28812948 REVERSEvery weakly similar to (94.4) TRXM_CHLRE Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii TRX_family Thioredoxin PRK10996 PDI_a_family protein|thioredoxin, putative, expressed",1.5503508,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os03g0851300","Transcript","highly similar to ( 671) AT5G09900 | Symbols: EMB2107, RPN5A, MSA | EMB2107 (EMBRYO DEFECTIVE 2107) | chr5:3089406-3092434 REVERSE RPN5 protein|proteasome subunit, putative, expressed",-1.0287567,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0603300","Transcript","weakly similar to ( 145) AT5G56840 | Symbols: | DNA-binding family protein | chr5:22980789-22982152 FORWARD protein|Myb transcription factor, putative, expressed",1.9925747]
[null,21.1,"redox.thioredoxin","Os06g0220800","Transcript","moderately similar to ( 206) AT1G34780 | Symbols: ATAPRL4 | ATAPRL4 (APR-like 4) | chr1:12748835-12750124 REVERSE PDI_a_ERp44_like protein|OsAPRL2 adenosine 5'-phosphosulfate reductase-like OsAPRL2, expressed",-1.2363266,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os06g0176000","Transcript","moderately similar to ( 357) AT3G22110 | Symbols: PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase | chr3:7792819-7793571 REVERSEmoderately similar to ( 422) PSA4A_ORYSA Proteasome subunit alpha type 4-1 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) - Oryza sativa (Rice) proteasome_alpha_type_4 proteasome_alpha PRK03996 proteasome_alpha_archeal PRE1 proteasome_alpha_type_7 proteasome_alpha_type_5 proteasome_protease_HslV proteasome_alpha_type_2 Proteasome proteasome_alpha_type_3 proteasome_alpha_type_6 proteasome_alpha_type_1 Ntn_hydrolase proteasome_beta proteasome_beta_archeal protein|peptidase, T1 family, putative, expressed",-1.3079978,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0524500","Transcript","weakly similar to ( 144) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.2737515]
[null,21.1,"redox.thioredoxin","Os03g0321400","Transcript","highly similar to ( 517) AT1G36050 | Symbols: | unknown protein | chr1:13450467-13453055 FORWARD DUF1692 protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed",-1.113903,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0182500","Transcript","moderately similar to ( 377) AT1G21720 | Symbols: PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase | chr1:7626394-7628070 FORWARDmoderately similar to ( 402) PSB3_ORYSA Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) proteasome_beta_type_3 proteasome_beta proteasome_protease_HslV Proteasome PRE1 proteasome_beta_archeal Ntn_hydrolase proteasome_beta_type_1 protein|peptidase, T1 family, putative, expressed",-0.9764131,null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os04g0341900","Transcript","weakly similar to ( 118) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.324516]
[null,21.1,"redox.thioredoxin","Os01g0339900","Transcript","highly similar to ( 501) AT2G47470 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | chr2:19481503-19483683 FORWARDhighly similar to ( 504) PDIA6_MEDSA Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) PDI_a_ERp38 PDI_a_family Thioredoxin PDI_a_PDI_a'_C PDI_a_P5 ERp29 PDI_a_ERp46 PDI_a_MPD1_like ERp29c PDI_a_PDIR PDI_a_ERdj5_C PDI_a_QSOX PDI_a_ERp44 PDI_a_TMX3 TRX_family protein|OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed",-1.0687809,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0634900","Transcript","moderately similar to ( 411) AT1G16470 | Symbols: PAB1 | PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | chr1:5623122-5625439 FORWARDmoderately similar to ( 446) PSA2_ORYSA Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) proteasome_alpha_type_2 proteasome_alpha PRK03996 PRE1 proteasome_alpha_archeal proteasome_alpha_type_7 Proteasome proteasome_alpha_type_4 proteasome_protease_HslV proteasome_alpha_type_5 proteasome_alpha_type_3 proteasome_alpha_type_6 proteasome_alpha_type_1 Ntn_hydrolase proteasome_beta_archeal proteasome_beta protein|peptidase, T1 family, putative, expressed",-1.1412064,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os03g0859900","Transcript","moderately similar to ( 250) AT5G60720 | Symbols: | unknown protein | chr5:24418436-24422177 REVERSEDUF547 protein|expressed protein",3.5007906]
[null,21.1,"redox.thioredoxin","Os05g0200100","Transcript","moderately similar to ( 214) AT4G29670 | Symbols: ACHT2 | thioredoxin family protein | chr4:14535983-14537108 REVERSE protein|thioredoxin, putative, expressed",1.0343539,null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0784700","Transcript","highly similar to ( 723) AT1G53750 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSEhighly similar to ( 750) PRS7_ORYSA 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) RPT1 PRK03992 SpoVK HflB hflB AAA COG1223 protein|26S protease regulatory subunit 7, putative, expressed",-1.4037241,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os06g0704100","Transcript","highly similar to ( 547) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",1.9001607]
[null,21.1,"redox.thioredoxin","Os05g0587300","Transcript","moderately similar to ( 311) AT2G42580 | Symbols: TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding | chr2:17728855-17731461 FORWARD protein|TTL3, putative, expressed",3.1235893,{"$nulls":8},"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os02g0153000","Transcript","moderately similar to ( 395) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",2.51517]
[null,21.1,"redox.thioredoxin","Os07g0684100","Transcript","weakly similar to ( 199) AT1G08570 | Symbols: ACHT4 | ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | chr1:2713604-2714312 FORWARD protein|thioredoxin, putative, expressed",2.8107865,null,"17.2.2","hormone metabolism.auxin.signal transduction","Os01g0919800","Transcript","moderately similar to ( 351) AT5G16530 | Symbols: PIN5 | PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter | chr5:5400735-5402626 FORWARDhighly similar to ( 506) PIN6_ORYSA Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice)Mem_trans protein|auxin efflux carrier component, putative, expressed",-2.1748767,null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854]
[null,21.1,"redox.thioredoxin","Os07g0657900","Transcript","highly similar to ( 741) AT2G41680 | Symbols: NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase | chr2:17376349-17379028 REVERSE TrxB PRK10262 AhpF TRX_NTR Pyr_redox_2 Lpd PRK11749 PRK12831 TRX_family gltD GltD protein|bifunctional thioredoxin reductase/thioredoxin, putative, expressed",1.8899571,null,"17.2.2","hormone metabolism.auxin.signal transduction","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767,null,"27.3.29","RNA.regulation of transcription.TCP transcription factor family","Os02g0747400","Transcript","weakly similar to ( 143) AT1G69690 | Symbols: | TCP family transcription factor, putative | chr1:26216449-26217426 FORWARDTCP protein|TCP-domain protein, putative, expressed",3.0791883]
[null,21.1,"redox.thioredoxin","Os05g0480200","Transcript","weakly similar to ( 124) AT3G08710 | Symbols: ATH9 | ATH9 (thioredoxin H-type 9) | chr3:2645590-2646304 FORWARDweakly similar to ( 103) TRXH_BRARA Thioredoxin H-type (TRX-H) - Brassica rapa (Turnip) TRX_family Thioredoxin protein|thioredoxin, putative, expressed",1.7853955,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os04g0337500","Transcript","moderately similar to ( 484) AT1G60730 | Symbols: | aldo/keto reductase family protein | chr1:22358613-22360082 REVERSEmoderately similar to ( 451) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 PRK10376 PRK09912 COG4989 PRK10625 COG1453 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",6.735754,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0602300","Transcript","very weakly similar to (94.4) AT2G38250 | Symbols: | DNA-binding protein-related | chr2:16018384-16019500 FORWARD protein|transcription factor TF2, putative, expressed",-1.2535847]
[null,21.1,"redox.thioredoxin","Os02g0819200","Transcript","weakly similar to ( 149) AT5G04260 | Symbols: WCRKC2 | WCRKC2 (WCRKC THIOREDOXIN 2) | chr5:1178901-1180022 REVERSE protein|thioredoxin, putative, expressed",-0.98071957,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os09g0546900","Transcript","very weakly similar to (99.4) AT5G27780 | Symbols: | auxin-responsive family protein | chr5:9838885-9839313 REVERSE protein|OsSAUR53 - Auxin-responsive SAUR gene family member, expressed",1.039621,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0445600","Transcript","weakly similar to ( 130) AT3G58630 | Symbols: | transcription factor | chr3:21683928-21685771 REVERSE protein|transcription factor like protein, putative, expressed",-1.0994588]
[null,21.1,"redox.thioredoxin","Os10g0500700","Transcript","moderately similar to ( 427) AT4G04950 | Symbols: | thioredoxin family protein | chr4:2517882-2519924 REVERSE GRX_PICOT_like COG0278 TRX_PICOT PRK10824 GRX_family TRX_family protein|OsGrx_S17 - glutaredoxin subgroup II, expressed",-1.1988082,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0556400","Transcript","moderately similar to ( 307) AT3G61750 | Symbols: | auxin-responsive protein -related | chr3:22857897-22859254 REVERSE B561 protein|auxin-responsive protein, putative, expressed",5.386839,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os01g0318400","Transcript","weakly similar to ( 150) AT3G10040 | Symbols: | transcription factor | chr3:3096580-3097875 REVERSE protein|homeodomain, putative, expressed",-1.3575705]
[null,21.2,"redox.ascorbate and glutathione","Os08g0101700","Transcript","weakly similar to ( 137) AT4G25570 | Symbols: ACYB-2 | ACYB-2; carbon-monoxide oxygenase | chr4:13053887-13055518 REVERSE Cytochrom_B561 B561 protein|cytochrome b561, putative, expressed",1.7257352,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os10g0510500","Transcript","very weakly similar to (85.9) AT2G46690 | Symbols: | auxin-responsive family protein | chr2:19180904-19181269 FORWARD protein|CPuORF40 - conserved peptide uORF-containing transcript, expressed",-1.1871086,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os02g0648300","Transcript","weakly similar to ( 157) AT1G76890 | Symbols: GT2, AT-GT2 | GT2; transcription factor | chr1:28873211-28875203 REVERSE protein|expressed protein",3.4605591]
[null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os07g0694700","Transcript","moderately similar to ( 269) AT1G07890 | Symbols: APX1, CS1 | APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | chr1:2438005-2439435 FORWARDmoderately similar to ( 327) APX2_ORYSA L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG protein|OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed",-1.2588414,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os06g0499500","Transcript","highly similar to ( 564) AT1G28130 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido synthetase | chr1:9826379-9827883 FORWARDnearly identical (1191) GH37_ORYSA Probable indole-3-acetic acid-amido synthetase GH3.7 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 7) (OsGH3-7) - Oryza sativa (Rice)GH3 protein|OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed",1.0032129,null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os10g0516500","Transcript","weakly similar to ( 167) AT1G76880 | Symbols: | trihelix DNA-binding protein, putative | chr1:28865594-28867931 FORWARD protein|expressed protein",-1.1469765]
[null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os04g0223300","Transcript","moderately similar to ( 405) AT4G35000 | Symbols: APX3 | APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase | chr4:16665007-16667541 REVERSEhighly similar to ( 542) APX3_ORYSA Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG secretory_peroxidase catalase_peroxidase protein|OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed",4.304131,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194900","Transcript","moderately similar to ( 357) AT3G25290 | Symbols: | auxin-responsive family protein | chr3:9208955-9210353 FORWARD B561 DUF568 protein|membrane protein, putative, expressed",-1.1955652,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os11g0490900","Transcript","weakly similar to ( 159) AT5G13080 | Symbols: WRKY75, ATWRKY75 | WRKY75; transcription factor | chr5:4149928-4151019 REVERSEWRKY protein|WRKY72, expressed",-2.0225337]
[null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os02g0553200","Transcript","moderately similar to ( 467) AT1G77490 | Symbols: TAPX | TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | chr1:29117688-29120046 FORWARDhighly similar to ( 654) APX8_ORYSA Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG secretory_peroxidase catalase_peroxidase protein|OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed",2.374568,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os01g0618100","Transcript","moderately similar to ( 394) AT1G60690 | Symbols: | aldo/keto reductase family protein | chr1:22349892-22351668 REVERSEmoderately similar to ( 372) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 COG4989 PRK10376 COG1453 PRK09912 PRK10625 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",1.3380041,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0734000","Transcript","weakly similar to ( 170) AT5G41570 | Symbols: WRKY24, ATWRKY24 | WRKY24; transcription factor | chr5:16624220-16625689 FORWARDWRKY protein|WRKY23, expressed",-1.2598414]
[null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os06g0232600","Transcript","moderately similar to ( 346) AT5G16710 | Symbols: DHAR3 | DHAR3 (dehydroascorbate reductase 1); glutathione dehydrogenase (ascorbate) | chr5:5483312-5484926 FORWARD GST_C_DHAR GST_C_CLIC protein|glutathione S-transferase, N-terminal domain containing protein, expressed",2.6273959,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194600","Transcript","weakly similar to ( 102) AT5G48750 | Symbols: | auxin-responsive protein, putative | chr5:19770052-19770819 REVERSE DUF568 protein|AIR12, putative, expressed",-2.172973,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0246700","Transcript","moderately similar to ( 280) AT1G62300 | Symbols: WRKY6, ATWRKY6 | WRKY6; transcription factor | chr1:23016887-23019155 REVERSEWRKY protein|WRKY1, expressed",-1.8576914]
[null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os04g0602100","Transcript","moderately similar to ( 409) AT4G09010 | Symbols: APX4 | APX4 (ASCORBATE PEROXIDASE 4); heme binding / peroxidase | chr4:5777502-5779338 REVERSEvery weakly similar to (81.3) APX3_ORYSA Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice)ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",2.967171,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os07g0475700","Transcript","protein|OsSAUR30 - Auxin-responsive SAUR gene family member, expressed",1.9867239,null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os08g0499300","Transcript","moderately similar to ( 327) AT5G56270 | Symbols: WRKY2, ATWRKY2 | WRKY2; transcription factor | chr5:22780816-22783137 FORWARDWRKY protein|WRKY30, expressed",-1.3271414]
[null,"21.2.1.4","redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase","Os12g0482700","Transcript","moderately similar to ( 467) AT4G33670 | Symbols: | L-galactose dehydrogenase (L-GalDH) | chr4:16169670-16171446 REVERSEvery weakly similar to (90.5) KCAB_ORYSA Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) Tas COG1453 Aldo_ket_red PRK09912 ARA1 COG4989 protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",2.2604835,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0437200","Transcript","moderately similar to ( 260) AT1G43130 | Symbols: LCV2 | LCV2 (LIKE COV 2) | chr1:16228661-16231158 REVERSEDUF502 COG2928 protein|protein of unknown function DUF502 domain containing protein, expressed",-1.0361265,null,"27.3.34","RNA.regulation of transcription.Orphan family","Os01g0180300","Transcript","moderately similar to ( 228) AT3G16000 | Symbols: MFP1 | MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1); DNA binding | chr3:5431041-5433613 REVERSEmoderately similar to ( 221) MFP1_TOBAC MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) protein|MAR-binding filament-like protein 1, putative, expressed",3.2926652]
[null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os03g0358100","Transcript","moderately similar to ( 264) AT2G48150 | Symbols: ATGPX4 | ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase | chr2:19688109-19689099 REVERSEmoderately similar to ( 225) GPX4_SPIOL Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Spinacia oleracea (Spinach) GSH_Peroxidase BtuE PRK10606 GSHPx protein|glutathione peroxidase domain containing protein, expressed",-1.0668083,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0643800","Transcript","very weakly similar to (84.0) AT2G45210 | Symbols: | auxin-responsive protein-related | chr2:18641884-18642372 FORWARDAuxin_inducible protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed",-0.9625449,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0247100","Transcript","weakly similar to ( 167) AT3G58120 | Symbols: ATBZIP61, BZIP61 | BZIP61; DNA binding / transcription activator/ transcription factor | chr3:21521289-21523078 REVERSEvery weakly similar to (83.6) RF2B_ORYSA Transcription factor RF2b - Oryza sativa (Rice) protein|bZIP transcription factor family protein, putative, expressed",4.0527945]
[null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os12g0263000","Transcript","highly similar to ( 530) AT5G27380 | Symbols: GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase | chr5:9668211-9670912 REVERSEhighly similar to ( 545) GSHB_BRAJU Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) GSH_synth_ATP eu-GS GSH_synthase protein|glutathione synthetase, chloroplast precursor, putative, expressed",2.1643085,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0158800","Transcript","highly similar to ( 824) AT3G26370 | Symbols: | unknown protein | chr3:9656886-9659741 FORWARDDUF246 protein|growth regulator related protein, putative, expressed",1.3208412,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0132500","Transcript","very weakly similar to (88.6) AT1G75390 | Symbols: AtbZIP44 | AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44); DNA binding / protein heterodimerization/ transcription factor | chr1:28292224-28292665 FORWARD protein|CPuORF1 - conserved peptide uORF-containing transcript, expressed",-1.4448551]
[null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os05g0129000","Transcript","highly similar to ( 792) AT4G23100 | Symbols: RML1, PAD2, GSH1, CAD2 | GSH1 (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase | chr4:12103779-12106751 REVERSEhighly similar to ( 791) GSH1_BRAJU Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard)GshA GCS2 protein|glutamate--cysteine ligase, chloroplast precursor, putative, expressed",1.2048731,{"$nulls":8},"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os10g0531900","Transcript","weakly similar to ( 183) AT4G38900 | Symbols: | bZIP protein | chr4:18139564-18141520 REVERSEweakly similar to ( 120) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|bZIP family transcription factor, putative, expressed",3.415385]
[null,21.3,"redox.heme","Os06g0591600","Transcript","moderately similar to ( 202) AT4G32690 | Symbols: GLB3 | GLB3; oxygen transporter | chr4:15765486-15766862 FORWARDBac_globin Trunc_globin protein|hemoglobin-like protein HbO, putative, expressed",-1.0225843,null,"17.1.1","hormone metabolism.abscisic acid.synthesis-degradation","Os03g0250200","Transcript","moderately similar to ( 220) AT1G75700 | Symbols: HVA22G | HVA22G (HVA22-LIKE PROTEIN G) | chr1:28423956-28424931 FORWARD TB2_DP1_HVA22 protein|HVA22, putative, expressed",3.818896,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os04g0495500","Transcript","weakly similar to ( 186) AT1G06070 | Symbols: | bZIP transcription factor, putative (bZIP69) | chr1:1835201-1837116 REVERSEweakly similar to ( 187) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|transcription factor RF2a, putative, expressed",1.9407967]
[null,21.4,"redox.glutaredoxins","Os06g0224200","Transcript","highly similar to ( 529) AT4G08550 | Symbols: | electron carrier/ protein disulfide oxidoreductase | chr4:5444345-5446825 FORWARDDUF547 GRX_DEP protein|glutaredoxin domain containing protein, putative, expressed",-1.5925931,null,"17.1.1.1.10","hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase","Os02g0704000","Transcript","highly similar to ( 605) AT4G19170 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD RPE65 COG3670 protein|9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed",-2.4485574,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0128200","Transcript","weakly similar to ( 151) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDmoderately similar to ( 328) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR bZIP_1 BRLZ protein|transcription factor, putative, expressed",1.7083406]
[null,21.4,"redox.glutaredoxins","Os04g0244400","Transcript","moderately similar to ( 374) AT5G42150 | Symbols: | electron carrier/ protein disulfide oxidoreductase | chr5:16846247-16847909 FORWARD GST_C_mPGES2 GST_N_mPGES2 protein|glutaredoxin family protein, expressed",-1.2191443,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os11g0498600","Transcript","weakly similar to ( 150) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 160) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 YOP1 protein|HVA22, putative, expressed",2.6062984,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0176900","Transcript","moderately similar to ( 252) AT5G10030 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor | chr5:3137648-3139295 REVERSEmoderately similar to ( 226) TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-1.2607719]
[null,21.4,"redox.glutaredoxins","Os01g0194600","Transcript","very weakly similar to (88.6) AT5G11930 | Symbols: | glutaredoxin family protein | chr5:3845165-3845611 REVERSE protein|OsGrx_A2 - glutaredoxin subgroup III, expressed",-1.6271919,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os04g0527000","Transcript","weakly similar to ( 183) AT5G08350 | Symbols: | GRAM domain-containing protein / ABA-responsive protein-related | chr5:2686417-2687175 REVERSE protein|GEM, putative, expressed",1.1323467,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0203000","Transcript","weakly similar to ( 113) AT5G11260 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5); DNA binding / double-stranded DNA binding / transcription factor | chr5:3593583-3594800 REVERSE protein|bZIP transcription factor domain containing protein, expressed",3.6010208]
[null,21.4,"redox.glutaredoxins","Os10g0482900","Transcript","highly similar to ( 553) AT3G11920 | Symbols: | glutaredoxin-related | chr3:3772311-3774887 FORWARDDUF547 GRX_DEP protein|glutaredoxin domain containing protein, putative, expressed",-1.1388675,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os09g0450600","Transcript","weakly similar to ( 102) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 114) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 protein|HVA22, putative, expressed",1.2709488,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0519800","Transcript","highly similar to ( 615) AT3G20250 | Symbols: APUM5 | APUM5 (Arabidopsis Pumilio 5); RNA binding / binding | chr3:7059098-7062660 REVERSE DUF632 COG5099 DUF630 protein|pumilio domain-containing protein PPD1, putative, expressed",-0.9846638]
[null,21.5,"redox.peroxiredoxin","Os06g0196300","Transcript","moderately similar to ( 262) AT3G26060 | Symbols: ATPRX Q | ATPRX Q; antioxidant/ peroxiredoxin | chr3:9524807-9526123 FORWARD PRX_BCP Bcp PRX_family AhpC-TSA bcp PRX_AhpE_like Redoxin AhpC PRX_Typ2cys TlpA_like_family protein|peroxiredoxin, putative, expressed",3.1995986,{"$nulls":8},"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os12g0233800","Transcript","moderately similar to ( 206) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDweakly similar to ( 154) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR BRLZ bZIP_1 protein|transcription factor, putative, expressed",-1.4053911]
[null,21.5,"redox.peroxiredoxin","Os01g0266600","Transcript","moderately similar to ( 276) AT3G06050 | Symbols: PRXIIF, ATPRXIIF | PRXIIF (PEROXIREDOXIN IIF); antioxidant/ peroxidase | chr3:1826311-1827809 REVERSE PRX5_like AHP1 Redoxin PRX_family protein|peroxiredoxin, putative, expressed",1.6453276,null,"17.3.1.1.1","hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2","Os01g0851600","Transcript","weakly similar to ( 163) AT2G38050 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase | chr2:15921303-15922176 REVERSE Steroid_dh protein|3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed",1.7856712,null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os09g0489500","Transcript","moderately similar to ( 338) AT5G06839 | Symbols: | bZIP family transcription factor | chr5:2120911-2126217 FORWARDmoderately similar to ( 300) TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-2.236131]
[null,21.5,"redox.peroxiredoxin","Os02g0192700","Transcript","moderately similar to ( 243) AT3G52960 | Symbols: | peroxiredoxin type 2, putative | chr3:19639699-19640403 FORWARD PRX5_like AHP1 Redoxin PRX_family protein|peroxiredoxin, putative, expressed",7.461029,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os02g0113200","Transcript","moderately similar to ( 455) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 466) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450, putative, expressed",3.5112286,null,"27.3.36","RNA.regulation of transcription.Argonaute","Os01g0275600","Transcript","nearly identical (1214) AT2G27040 | Symbols: AGO4, OCP11 | AGO4 (ARGONAUTE 4); nucleic acid binding | chr2:11536795-11541503 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|argonaute, putative, expressed",1.4471418]
[null,"21.5.1","redox.peroxiredoxin.BAS1","Os04g0416400","Transcript","moderately similar to ( 209) AT5G06290 | Symbols: 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin | chr5:1919380-1921211 FORWARDmoderately similar to ( 202) BAS1_HORVU 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) PRX_Typ2cys AhpC PRK10382 PRX_1cys protein|2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed",2.0173132,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os05g0211100","Transcript","moderately similar to ( 483) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 486) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450 51, putative, expressed",1.6188742,null,"27.3.39","RNA.regulation of transcription.AtSR Transcription Factor family","Os03g0851700","Transcript","moderately similar to ( 347) AT4G35450 | Symbols: AKR2, AFT, AKR2A | AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding | chr4:16839862-16841759 FORWARD ANK protein|ankyrin repeat domain containing protein, expressed",1.7291578]
[null,"21.5.1","redox.peroxiredoxin.BAS1","Os02g0537700","Transcript","moderately similar to ( 380) AT5G06290 | Symbols: 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin | chr5:1919380-1921211 FORWARDmoderately similar to ( 379) BAS1_HORVU 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) PRX_Typ2cys AhpC PRX_1cys PRX_family PRK10382 AhpC-TSA PRX_AhpE_like Bcp PRX_BCP protein|peroxiredoxin, putative, expressed",2.2646053,null,"17.3.1.2.6","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7","Os01g0134500","Transcript","moderately similar to ( 387) AT3G02580 | Symbols: STE1, DWF7, BUL1 | STE1 (STEROL 1); C-5 sterol desaturase | chr3:547048-548615 FORWARDmoderately similar to ( 387) SC5D_TOBAC Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) protein|fatty acid hydroxylase, putative, expressed",2.5228798,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0190300","Transcript","weakly similar to ( 125) AT3G16500 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor | chr3:5612801-5614208 REVERSEweakly similar to ( 197) IAA2_ORYSA Auxin-responsive protein IAA2 (Indoleacetic acid-induced protein 2) - Oryza sativa (Rice)AUX_IAA protein|OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed",1.2362556]
[null,21.6,"redox.dismutases and catalases","Os08g0561700","Transcript","moderately similar to ( 245) AT2G28190 | Symbols: CSD2, CZSOD2 | CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); superoxide dismutase | chr2:12014548-12016303 FORWARDmoderately similar to ( 287) SODCP_ORYSA Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Oryza sativa (Rice) Sod_Cu Cu-Zn_Superoxide_Dismutase SodC protein|copper/zinc superoxide dismutase, putative, expressed",3.2064326,null,"17.3.1.2.7","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5","Os02g0465400","Transcript","highly similar to ( 575) AT1G50430 | Symbols: DWF5, PA, LE, ST7R, 7RED | DWF5 (DWARF 5); sterol delta7 reductase | chr1:18682175-18685555 REVERSE ERG4_ERG24 protein|delta14-sterol reductase, putative, expressed",-1.0864153,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0231000","Transcript","weakly similar to ( 183) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 343) IAA3_ORYSA Auxin-responsive protein IAA3 (Indoleacetic acid-induced protein 3) - Oryza sativa (Rice)AUX_IAA protein|OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed",1.1733681]
[null,21.6,"redox.dismutases and catalases","Os02g0115700","Transcript","highly similar to ( 724) AT1G20630 | Symbols: CAT1 | CAT1 (CATALASE 1); catalase | chr1:7146812-7149609 FORWARDhighly similar to ( 943) CATA1_ORYSA Catalase isozyme A (EC 1.11.1.6) (CAT-A) - Oryza sativa (Rice) catalase Catalase KatE katE protein|catalase isozyme A, putative, expressed",2.5351803,{"$nulls":8},"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os06g0597000","Transcript","weakly similar to ( 112) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 210) IAA23_ORYSA Auxin-responsive protein IAA23 (Indoleacetic acid-induced protein 23) - Oryza sativa (Rice)AUX_IAA protein|OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed",1.4440836]
[{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os02g0280700","Transcript","moderately similar to ( 286) AT5G20400 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:6894871-6896185 FORWARDweakly similar to ( 172) LDOX_MALDO Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",3.7561703,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os05g0230700","Transcript","weakly similar to ( 188) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 348) IAA17_ORYSA Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) - Oryza sativa (Rice)AUX_IAA protein|OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed",1.7808269]
[null,"10.1.5","cell wall.precursor synthesis.UXS","Os07g0674100","Transcript","highly similar to ( 653) AT3G62830 | Symbols: UXS2, ATUXS2 | AUD1; UDP-glucuronate decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase | chr3:23232539-23235353 FORWARDweakly similar to ( 102) GME1_ORYSA GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) WcaG RfbB Epimerase GalE PRK10084 PRK08125 PRK11908 PRK10217 Gmd PRK10675 RfbD protein|NAD dependent epimerase/dehydratase family domain containing protein, expressed",1.4989892,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os08g0390200","Transcript","moderately similar to ( 283) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 240) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",4.8504515,null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os07g0182400","Transcript","weakly similar to ( 140) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 320) IAA24_ORYSA Auxin-responsive protein IAA24 (Indoleacetic acid-induced protein 24) - Oryza sativa (Rice)AUX_IAA protein|OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed",1.0804805]
[null,"10.1.6","cell wall.precursor synthesis.GAE","Os06g0187200","Transcript","highly similar to ( 641) AT4G30440 | Symbols: GAE1 | GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1); UDP-glucuronate 4-epimerase/ catalytic | chr4:14881976-14883265 REVERSE WcaG GalE Epimerase RfbB PRK10675 Gmd PRK10217 PRK10084 protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",-1.344282,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0690500","Transcript","moderately similar to ( 250) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 226) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",-1.3304685,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0511500","Transcript","highly similar to ( 508) AT1G05120 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1471624-1476067 REVERSEvery weakly similar to (89.0) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) HepA HELICc protein|DNA repair protein rhp16, putative, expressed",-1.1601919]
[null,"10.1.12.2","cell wall.precursor synthesis.KDO pathway.KDO-8-Phosphate Synthase","Os12g0210800","Transcript","moderately similar to ( 485) AT1G79500 | Symbols: | 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA) | chr1:29903797-29907730 FORWARDmoderately similar to ( 483) KDSA_PEA 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (GardenPRK05198 KdsA PRK12457 DAHP_synth_1 PRK08673 AroA PRK12595 protein|2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed",1.5727291,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os01g0352100","Transcript","moderately similar to ( 291) AT1G17010 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:5817667-5819183 FORWARDweakly similar to ( 178) FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) PcbC 2OG-FeII_Oxy protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed",3.340451,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0434500","Transcript","highly similar to ( 743) AT2G16390 | Symbols: DRD1, CHR35, DMS1 | DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding | chr2:7097638-7101096 FORWARD HepA SNF2_N protein|DRD1, putative, expressed",1.2663385]
[null,"10.1.20","cell wall.precursor synthesis.phosphomannose isomerase","Os01g0127900","Transcript","moderately similar to ( 469) AT3G02570 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBRYO ARREST 31); mannose-6-phosphate isomerase | chr3:543463-545478 REVERSE PMI_typeI ManA protein|mannose-6-phosphate isomerase, putative, expressed",-1.2574978,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0439500","Transcript","moderately similar to ( 234) AT1G17020 | Symbols: SRG1, ATSRG1 | SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | chr1:5820258-5821741 FORWARDweakly similar to ( 160) FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",1.6984366,null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os05g0150300","Transcript","nearly identical (1538) AT3G06400 | Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | chr3:1941066-1946700 FORWARDnearly identical (1650) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) SNF2_N HepA SLIDE HELICc DEXDc DEXHc HELICc Helicase_C DEXDc protein|chromatin-remodeling complex ATPase chain, putative, expressed",-1.140707]
[null,"10.1.21","cell wall.precursor synthesis.phosphomannomutase","Os04g0682300","Transcript","moderately similar to ( 373) AT2G45790 | Symbols: ATPMM, PMM | PMM (PHOSPHOMANNOMUTASE); phosphomannomutase | chr2:18855876-18857753 FORWARD PMM Cof protein|phosphomannomutase, putative, expressed",1.3813729,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0451000","Transcript","moderately similar to ( 400) AT1G05010 | Symbols: EFE, ACO4, EAT1 | EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | chr1:1431419-1432695 REVERSEhighly similar to ( 568) ACCO1_ORYSA 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed",2.1812222,null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os11g0463600","Transcript","weakly similar to ( 164) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0070429]
[null,"10.1.30.1","cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase","Os04g0608100","Transcript","moderately similar to ( 285) AT3G10700 | Symbols: | GHMP kinase family protein | chr3:3346789-3350863 REVERSE PRK05322 GalK PRK03817 PRK05101 protein|GHMP kinases ATP-binding protein, putative, expressed",1.6692061,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0248900","Transcript","moderately similar to ( 249) AT5G41980 | Symbols: | unknown protein | chr5:16793765-16794889 FORWARD protein|retrotransposon protein, putative, unclassified, expressed",6.0013676,null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os08g0528900","Transcript","moderately similar to ( 378) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0100232]
[null,10.2,"cell wall.cellulose synthesis","Os09g0428000","Transcript","highly similar to ( 842) AT4G31590 | Symbols: ATCSLC05, CSLC05, ATCSLC5 | ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/ transferase, transferring glycosyl groups | chr4:15309889-15312336 REVERSECOG1215 bcsA PRK11204 protein|CSLC2 - cellulose synthase-like family C, expressed",1.706642,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108,null,"27.3.49","RNA.regulation of transcription.GeBP like","Os12g0242800","Transcript","weakly similar to ( 149) AT5G14280 | Symbols: | DNA-binding storekeeper protein-related | chr5:4609123-4611444 FORWARD protein|DNA-binding storekeeper protein-related, putative, expressed",1.9528753]
[null,10.2,"cell wall.cellulose synthesis","Os07g0630900","Transcript","highly similar to ( 572) AT5G22740 | Symbols: ATCSLA02, CSLA02, ATCSLA2 | ATCSLA02; mannan synthase/ transferase, transferring glycosyl groups | chr5:7555379-7559866 REVERSECOG1215 bcsA PRK11204 protein|CSLA7 - cellulose synthase-like family A; mannan synthase, expressed",1.2711644,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os10g0450000","Transcript","weakly similar to ( 114) AT3G50150 | Symbols: | unknown protein | chr3:18595809-18597551 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",4.2582054,null,"27.3.50","RNA.regulation of transcription.General Transcription","Os08g0532500","Transcript","weakly similar to ( 172) AT4G35540 | Symbols: | transcription regulator/ zinc ion binding | chr4:16873939-16875522 FORWARD protein|zinc ion binding protein, putative, expressed",-1.0528625]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os09g0422500","Transcript","nearly identical (1701) AT5G17420 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | IRX3 (IRREGULAR XYLEM 3); cellulose synthase | chr5:5736859-5741407 REVERSECellulose_synt protein|CESA9 - cellulose synthase, expressed",1.567009,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0163200","Transcript","weakly similar to ( 105) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1524832,null,"27.3.54","RNA.regulation of transcription.Histone acetyltransferases","Os04g0484900","Transcript","highly similar to ( 993) AT5G50320 | Symbols: ELO3, HAG3, HAC8 | ELO3 (ELONGATA 3); histone acetyltransferase | chr5:20481200-20484811 REVERSEnearly identical (1061) ELP3_ORYSA Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) ELP3 COG1242 Elp3 protein|elongator complex protein 3, putative, expressed",-0.9539693]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os07g0552800","Transcript","highly similar to ( 761) AT5G16910 | Symbols: ATCSLD2, CSLD2 | CSLD2 (CELLULOSE-SYNTHASE LIKE D2); cellulose synthase/ transferase, transferring glycosyl groups | chr5:5561679-5565290 FORWARDCellulose_synt protein|CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed",2.23083,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057,null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os09g0551600","Transcript","very weakly similar to (93.2) AT1G20696 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181170 FORWARDvery weakly similar to (99.4) HMGL_IPONI HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|HMG1/2, putative, expressed",2.2946422]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os10g0467800","Transcript","highly similar to ( 879) AT5G44030 | Symbols: CESA4, IRX5, NWS2 | CESA4 (CELLULOSE SYNTHASE A4); cellulose synthase/ transferase, transferring glycosyl groups | chr5:17714713-17719564 FORWARDCellulose_synt protein|CESA7 - cellulose synthase, expressed",6.027947,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os09g0304500","Transcript","weakly similar to ( 119) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1891744,null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os08g0108200","Transcript","highly similar to ( 540) AT5G64630 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIATA 2); nucleotide binding / protein binding | chr5:25833298-25836158 FORWARD WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.5532484]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os01g0750300","Transcript","nearly identical (1497) AT4G18780 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | IRX1 (IRREGULAR XYLEM 1); cellulose synthase/ transferase, transferring glycosyl groups | chr4:10312846-10316719 REVERSECellulose_synt protein|CESA4 - cellulose synthase, expressed",5.462513,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0310600","Transcript","weakly similar to ( 150) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.4500562,null,"27.3.64","RNA.regulation of transcription.PHOR1","Os02g0540700","Transcript","weakly similar to ( 123) AT3G18710 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29); ubiquitin-protein ligase | chr3:6434234-6435481 REVERSEUbox U-box protein|U-box domain containing protein, expressed",-1.6222826]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os07g0424400","Transcript","nearly identical (1357) AT5G64740 | Symbols: CESA6, IXR2, E112, PRC1 | CESA6 (CELLULOSE SYNTHASE 6); cellulose synthase/ transferase, transferring glycosyl groups | chr5:25881555-25886333 FORWARDCellulose_synt protein|CESA3 - cellulose synthase, expressed",3.1942482,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0198500","Transcript","moderately similar to ( 298) AT1G47740 | Symbols: | unknown protein | chr1:17567903-17569035 FORWARD DUF862 protein|ethylene-responsive element-binding protein, putative, expressed",1.7501227,null,"27.3.66","RNA.regulation of transcription.Psudo ARR transcription factor family","Os09g0532400","Transcript","moderately similar to ( 259) AT5G24470 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator | chr5:8356204-8358873 REVERSEnearly identical (1099) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)Response_reg REC REC AtoC CheY protein|response regulator receiver domain containing protein, expressed",2.290649]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os07g0553000","Transcript","highly similar to ( 758) AT3G03050 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE SYNTHASE-LIKE D3); cellulose synthase/ transferase, transferring glycosyl groups | chr3:687873-691629 FORWARDCellulose_synt protein|CSLF1 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed",1.7108744,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os11g0543300","Transcript","moderately similar to ( 217) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.0513479,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os10g0501300","Transcript","moderately similar to ( 277) AT2G20710 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8926535-8927722 FORWARD protein|pentatricopeptide, putative, expressed",-1.0453898]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os03g0808100","Transcript","nearly identical (1733) AT5G05170 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/ transferase, transferring glycosyl groups | chr5:1530401-1535090 REVERSECellulose_synt protein|CESA2 - cellulose synthase, expressed",2.2981665,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os02g0469200","Transcript","highly similar to ( 726) AT5G58100 | Symbols: | unknown protein | chr5:23507828-23514863 FORWARD protein|expressed protein",-1.0693129]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os10g0578200","Transcript","nearly identical (1728) AT3G03050 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE SYNTHASE-LIKE D3); cellulose synthase/ transferase, transferring glycosyl groups | chr3:687873-691629 FORWARDCellulose_synt protein|CSLD1 - cellulose synthase-like family D, expressed",-1.2528273,{"$nulls":8},"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os08g0160500","Transcript","highly similar to ( 888) AT3G03050 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE SYNTHASE-LIKE D3); cellulose synthase/ transferase, transferring glycosyl groups | chr3:687873-691629 FORWARDCellulose_synt protein|CSLF6 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed",2.4047902,null,"17.4.1","hormone metabolism.cytokinin.synthesis-degradation","Os03g0810100","Transcript","moderately similar to ( 274) AT3G63110 | Symbols: ATIPT3, IPT3 | ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups | chr3:23318437-23319447 REVERSE miaA MiaA protein|IPP transferase, putative, expressed",-1.1375446,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0198900","Transcript","moderately similar to ( 349) AT1G19340 | Symbols: | methyltransferase MT-A70 family protein | chr1:6684798-6686798 FORWARD MT-A70 protein|MT-A70 domain containing protein, expressed",1.2118767]
[null,"10.2.1","cell wall.cellulose synthesis.cellulose synthase","Os07g0551600","Transcript","highly similar to ( 727) AT3G03050 | Symbols: CSLD3, KJK, ATCSLD3 | CSLD3 (CELLULOSE SYNTHASE-LIKE D3); cellulose synthase/ transferase, transferring glycosyl groups | chr3:687873-691629 FORWARDCellulose_synt protein|CSLF9 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed",1.5876184,null,"17.4.2","hormone metabolism.cytokinin.signal transduction","Os09g0529900","Transcript","moderately similar to ( 284) AT4G10750 | Symbols: | HpcH/HpaI aldolase family protein | chr4:6618724-6619800 FORWARDHpcH HpcH_HpaI PRK10558 PRK10128 protein|4-hydroxy-2-oxovalerate aldolase, putative, expressed",1.2707883,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0270000","Transcript","weakly similar to ( 132) AT2G45430 | Symbols: | DNA-binding protein-related | chr2:18727848-18728801 FORWARDDUF296 protein|DNA binding protein, putative, expressed",-1.075112]
[null,"10.2.2","cell wall.cellulose synthesis.COBRA","Os03g0301200","Transcript","highly similar to ( 665) AT4G16120 | Symbols: ATSEB1, COBL7, SEB1 | COBL7 (COBRA-LIKE 7) | chr4:9116591-9119138 REVERSEweakly similar to ( 150) COBL1_ORYSA COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) - Oryza sativa (Rice)Phytochel_synth protein|COBRA-like protein 7 precursor, putative, expressed",-1.1215805,{"$nulls":8},"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0278000","Transcript","moderately similar to ( 323) AT2G13690 | Symbols: | PRLI-interacting factor, putative | chr2:5706704-5708895 REVERSE protein|H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed",1.0838779]
[null,"10.2.2","cell wall.cellulose synthesis.COBRA","Os07g0690900","Transcript","highly similar to ( 532) AT4G16120 | Symbols: ATSEB1, COBL7, SEB1 | COBL7 (COBRA-LIKE 7) | chr4:9116591-9119138 REVERSEweakly similar to ( 119) COBL2_ORYSA COBRA-like 2 protein precursor (BRITTLE CULM1-like 2 protein) - Oryza sativa (Rice)Phytochel_synth protein|COBRA-like protein 7 precursor, putative, expressed",-1.0373789,null,"17.7.1.3","hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase","Os02g0110200","Transcript","moderately similar to ( 367) AT4G15440 | Symbols: HPL1, CYP74B2 | HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:8835869-8838462 FORWARDmoderately similar to ( 278) C74A4_ORYSA Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) protein|cytochrome P450, putative, expressed",3.3673182,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0528000","Transcript","weakly similar to ( 106) AT3G49410 | Symbols: | unknown protein | chr3:18325015-18328858 FORWARD protein|expressed protein",-0.9678057]
[null,10.3,"cell wall.hemicellulose synthesis","Os02g0763200","Transcript","moderately similar to ( 489) AT2G03220 | Symbols: FT1, ATFUT1, ATFT1, MUR2 | FT1 (FUCOSYLTRANSFERASE 1); fucosyltransferase/ transferase, transferring glycosyl groups | chr2:970401-972353 REVERSEmoderately similar to ( 481) FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea)XG_FTase protein|xyloglucan fucosyltransferase, putative, expressed",-1.2244211,{"$nulls":8},"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os09g0542000","Transcript","weakly similar to ( 186) AT1G76010 | Symbols: | nucleic acid binding | chr1:28528505-28530488 REVERSE Alba protein|protein of unknown function domain containing protein, expressed",-1.0918126]
[null,10.5,"cell wall.cell wall proteins","Os04g0382300","Transcript","moderately similar to ( 499) AT3G48530 | Symbols: KING1 | KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1) | chr3:17987559-17989592 FORWARD CBS_pair_29 protein|CBS domain containing membrane protein, putative, expressed",1.4266669,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os01g0701700","Transcript","moderately similar to ( 308) AT4G36470 | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr4:17215128-17216475 REVERSEmoderately similar to ( 226) BAMT_ANTMA Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon)Methyltransf_7 protein|SAM dependent carboxyl methyltransferase, putative, expressed",-2.0907042,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0735300","Transcript","weakly similar to ( 182) AT3G07030 | Symbols: | nucleic acid binding | chr3:2223001-2225254 REVERSE Alba protein|nucleic acid binding protein, putative, expressed",-1.0198506]
[null,10.5,"cell wall.cell wall proteins","Os01g0748200","Transcript","moderately similar to ( 252) AT3G58800 | Symbols: | unknown protein | chr3:21748562-21749596 FORWARD protein|expressed protein",-1.6646973,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0544400","Transcript","moderately similar to ( 404) AT1G02150 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:408779-410433 FORWARD protein|PPR repeat domain containing protein, putative, expressed",2.26373]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os08g0490600","Transcript","weakly similar to ( 154) AT5G55730 | Symbols: FLA1 | FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1) | chr5:22558375-22560392 REVERSE protein|fasciclin domain containing protein, expressed",1.3993632,{"$nulls":8},"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0953801","Transcript","weakly similar to ( 112) AT5G49700 | Symbols: | DNA-binding protein-related | chr5:20192599-20193429 FORWARDDUF296 protein|DNA binding protein, putative, expressed",4.34181]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os01g0668100","Transcript","weakly similar to ( 127) AT1G03870 | Symbols: FLA9 | FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9) | chr1:982625-983368 REVERSE protein|fasciclin domain containing protein, expressed",3.9767025,null,"17.6.1","hormone metabolism.gibberelin.synthesis-degradation","Os11g0265800","Transcript","very weakly similar to (80.9) AT1G52820 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:19669216-19670321 FORWARD protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.7052648,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os08g0451400","Transcript","highly similar to ( 781) AT3G43240 | Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr3:15210032-15214440 REVERSE protein|ARID/BRIGHT DNA-binding domain containing protein, expressed",-1.0829905]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os05g0563600","Transcript","weakly similar to ( 140) AT5G44130 | Symbols: FLA13 | FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) | chr5:17761128-17761871 FORWARD protein|fasciclin domain containing protein, expressed",4.015551,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os03g0856700","Transcript","moderately similar to ( 434) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 712) GAOX1_ORYSA Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 1, putative, expressed",1.865975,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os12g0579000","Transcript","moderately similar to ( 262) AT5G61150 | Symbols: VIP4 | VIP4 (VERNALIZATION INDEPENDENCE 4); protein binding | chr5:24603846-24607528 REVERSE Leo1 protein|VIP4, putative, expressed",-0.9946081]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os03g0788600","Transcript","highly similar to ( 508) AT2G35860 | Symbols: FLA16 | FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR) | chr2:15059859-15061810 FORWARD Fasciclin protein|fasciclin domain containing protein, expressed",4.788579,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os01g0883800","Transcript","moderately similar to ( 369) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 655) GAOX2_ORYSA Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 2, putative, expressed",1.0044001,null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0472000","Transcript","moderately similar to ( 231) AT1G53670 | Symbols: MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase | chr1:20036687-20038074 FORWARD PRK00222 COG0229 SelR PRK05550 PRK05508 protein|peptide methionine sulfoxide reductase msrB, putative, expressed",1.7438723]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os09g0248100","Transcript","moderately similar to ( 274) AT4G12730 | Symbols: FLA2 | FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2) | chr4:7491598-7492809 REVERSE protein|fasciclin-like arabinogalactan protein 8 precursor, putative, expressed",5.825934,{"$nulls":3},"21 of the RLKs were confirmed with literature (Gao and Xue et al 2012)",{"$nulls":4},"27.3.68","RNA.regulation of transcription.PWWP domain protein","Os03g0358000","Transcript","moderately similar to ( 232) AT3G63070 | Symbols: | PWWP domain-containing protein | chr3:23302667-23309575 FORWARDRPR protein|PWWP domain containing protein, expressed",-1.0836544]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os05g0163300","Transcript","weakly similar to ( 177) AT5G03170 | Symbols: FLA11 | FLA11 | chr5:752898-753638 REVERSE protein|fasciclin domain containing protein, expressed",3.399143,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0480400","Transcript","highly similar to ( 649) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 175) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase PTKc S_TKc Pkinase_Tyr TyrKc S_TKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Fes_like PTKc_Frk_like PTKc_Lck_Blk PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Csk PTKc_Abl PTKc_Lyn PTKc_Chk PTKc_FGFR PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Ror PTKc_EphR PTKc_InsR_like PTKc_Trk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",2.7635052,null,"27.3.69","RNA.regulation of transcription.SET-domain transcriptional regulator family","Os12g0236900","Transcript","highly similar to ( 659) AT5G14260 | Symbols: | SET domain-containing protein | chr5:4601139-4603873 FORWARD Rubis-subs-bind protein|SET domain-containing protein, putative, expressed",1.5258604]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os03g0128000","Transcript","moderately similar to ( 285) AT2G45470 | Symbols: FLA8, AGP8 | FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) | chr2:18742797-18744059 REVERSE protein|fasciclin-like arabinogalactan protein, putative, expressed",7.123228,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0649700","Transcript","moderately similar to ( 327) AT5G43020 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:17255426-17257742 REVERSEweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Src PTKc_Lck_Blk PTKc_Frk_like PTKc_Jak_rpt2 protein|receptor kinase, putative, expressed",2.0595152,null,"27.3.73","RNA.regulation of transcription.Zn-finger(CCHC)","Os02g0523500","Transcript","nearly identical (1254) AT5G07350 | Symbols: | tudor domain-containing protein / nuclease family protein | chr5:2319790-2324892 REVERSE TUDOR SNc SNc protein|TUDOR protein with multiple SNc domains, putative, expressed",-0.9515063]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os08g0321000","Transcript","moderately similar to ( 273) AT5G55730 | Symbols: FLA1 | FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1) | chr5:22558375-22560392 REVERSE protein|fasciclin-like arabinogalactan protein 8 precursor, putative, expressed",3.8236225,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0133900","Transcript","highly similar to ( 522) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 147) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc PTKc Pkinase_Tyr TyrKc SPS1 PTKc_Src_like PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Yes protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.7740196,null,"27.3.80","RNA.regulation of transcription.zf-HD","Os08g0438400","Transcript","very weakly similar to (85.9) AT3G28920 | Symbols: AtHB34 | AtHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor | chr3:10940598-10941536 REVERSEZF-HD_dimer protein|ZF-HD protein dimerisation region containing protein, expressed",-1.6525875]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os02g0308800","Transcript","weakly similar to ( 134) AT5G03170 | Symbols: FLA11 | FLA11 | chr5:752898-753638 REVERSE protein|fasciclin domain containing protein, expressed",6.720511,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0104200","Transcript","moderately similar to ( 205) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDweakly similar to ( 187) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor precursor, putative, expressed",1.015623,null,"27.3.81","RNA.regulation of transcription.S1FA","Os04g0408700","Transcript","weakly similar to ( 102) S1FA2_ORYSA DNA-binding protein S1FA2 - Oryza sativa (Rice)S1FA protein|DNA-binding protein S1FA, putative, expressed",0.9976403]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os09g0482780","Transcript","weakly similar to ( 189) AT2G04780 | Symbols: FLA7 | FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN 7) | chr2:1677488-1678252 FORWARD protein|fasciclin domain containing protein, expressed",3.5369987,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0819100","Transcript","highly similar to ( 610) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 174) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc PTKc_Jak_rpt2 PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Fes_like PTKc_Frk_like PTKc_Trk PTKc_Tie2 PTKc_Lyn PTKc_Lck_Blk PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Tie1 PTKc_Ror PTKc_Fyn_Yrk PTKc_FGFR PTKc_Itk PTKc_Chk PTKc_Srm_Brk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.1429157,null,"27.3.82","RNA.regulation of transcription.plant TF (pbf2)","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958]
[null,"10.5.1.1","cell wall.cell wall proteins.AGPs.AGP","Os04g0574200","Transcript","moderately similar to ( 323) AT2G45470 | Symbols: FLA8, AGP8 | FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) | chr2:18742797-18744059 REVERSE protein|fasciclin-like arabinogalactan protein, putative, expressed",4.2212663,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os10g0492400","Transcript","weakly similar to ( 190) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 103) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc SPS1 protein|receptor kinase like protein, putative, expressed",3.4061668,null,"27.3.99","RNA.regulation of transcription.unclassified","Os11g0246100","Transcript","very weakly similar to (80.1) AT1G21150 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr1:7406406-7407578 REVERSEmTERF protein|mTERF family protein, expressed",-1.2360724]
[null,"10.5.3","cell wall.cell wall proteins.LRR","Os04g0670100","Transcript","moderately similar to ( 317) AT4G06744 | Symbols: | leucine-rich repeat family protein / extensin family protein | chr4:4070870-4072084 REVERSEvery weakly similar to (83.2) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|uncharacterized protein At4g06744 precursor, putative, expressed",2.7095978,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0118700","Transcript","weakly similar to ( 191) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE protein|aspartic protease, putative, expressed",7.5530396]
[null,"10.5.3","cell wall.cell wall proteins.LRR","Os02g0616100","Transcript","moderately similar to ( 245) AT4G06744 | Symbols: | leucine-rich repeat family protein / extensin family protein | chr4:4070870-4072084 REVERSE protein|uncharacterized protein At4g06744 precursor, putative, expressed",4.6906676,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os09g0400500","Transcript","moderately similar to ( 397) AT3G17840 | Symbols: RLK902 | RLK902; ATP binding / kinase/ protein serine/threonine kinase | chr3:6106092-6108430 FORWARDweakly similar to ( 119) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr SPS1 TyrKc PTKc PTKc_Src_like PTKc_Jak_rpt2 PTKc_Csk_like protein|inactive receptor kinase At2g26730 precursor, putative, expressed",-1.3753079,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0534800","Transcript","moderately similar to ( 201) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.4917682]
[null,"10.5.4","cell wall.cell wall proteins.HRGP","Os01g0754500","Transcript","weakly similar to ( 152) AT4G28300 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:14015414-14016823 FORWARD protein|protein of unknown function DUF1421 domain containing protein, expressed",1.0233096,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os07g0568700","Transcript","moderately similar to ( 211) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDhighly similar to ( 610) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor 1 precursor, putative, expressed",1.8588246,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0624900","Transcript","moderately similar to ( 226) AT1G21000 | Symbols: | zinc-binding family protein | chr1:7338013-7339088 FORWARDPLATZ protein|zinc-binding protein, putative, expressed",-1.2052364]
[null,"10.5.5","cell wall.cell wall proteins.RGP","Os03g0599800","Transcript","highly similar to ( 667) AT5G15650 | Symbols: RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups | chr5:5092203-5094093 FORWARDhighly similar to ( 729) UPTG_MAIZE Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) - Zea mays (Maize)RGP protein|alpha-1,4-glucan-protein synthase, putative, expressed",-1.4671631,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0406800","Transcript","moderately similar to ( 476) AT1G03440 | Symbols: | leucine-rich repeat family protein | chr1:852681-853874 FORWARDweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase precursor, putative, expressed",2.1089206,null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0189300","Transcript","moderately similar to ( 397) AT1G77060 | Symbols: | mutase family protein | chr1:28951804-28953449 REVERSEmoderately similar to ( 329) CPPM_DIACA Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) PrpB prpB protein|carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed",3.295161]
[null,"10.6.1","cell wall.degradation.cellulases and beta -1,4-glucanases","Os03g0749500","Transcript","highly similar to ( 885) AT5G20950 | Symbols: | glycosyl hydrolase family 3 protein | chr5:7107609-7110775 REVERSEBglX Glyco_hydro_3 Glyco_hydro_3_C protein|periplasmic beta-glucosidase precursor, putative, expressed",4.551239,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0335500","Transcript","highly similar to ( 906) AT3G56370 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:20899403-20902390 REVERSEmoderately similar to ( 333) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc PTKc Pkinase TyrKc S_TKc PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Syk_like PTKc_EGFR_like PTKc_Ack_like PTK_CCK4 PTKc_Ror PTKc_Srm_Brk PTKc_Frk_like PTKc_Fes_like PTKc_c-ros PTKc_Csk_like PTKc_EphR PTKc_Jak2_Jak3_rpt2 PTKc_Trk PTKc_InsR_like PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Itk PTKc_Src PTKc_Lck_Blk PTKc_Met_Ron PTKc_Aatyk PTKc_Yes PTKc_Hck PTKc_Musk PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkC PTKc_Ror1 PTKc_Ror2 PTK_HER3 PTKc_Lyn PTKc_Abl PTKc_Aatyk1_Aatyk3 PTKc_TrkB PTKc_FAK PTKc_HER4 PTKc_DDR protein|receptor-like protein kinase precursor, putative, expressed",2.4075158,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0637200","Transcript","moderately similar to ( 222) AT5G61190 | Symbols: | zinc finger protein-related | chr5:24615480-24619886 FORWARDDUF537 protein|expressed protein",0.95674485]
[null,"10.6.1","cell wall.degradation.cellulases and beta -1,4-glucanases","Os03g0749300","Transcript","highly similar to ( 922) AT5G20950 | Symbols: | glycosyl hydrolase family 3 protein | chr5:7107609-7110775 REVERSEBglX Glyco_hydro_3 Glyco_hydro_3_C protein|periplasmic beta-glucosidase precursor, putative, expressed",1.8135477,null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0197500","Transcript","moderately similar to ( 400) AT5G23570 | Symbols: SGS3, ATSGS3 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | chr5:7943621-7945874 FORWARD protein|leafbladeless1, putative, expressed",1.5788475]
[null,"10.6.2","cell wall.degradation.mannan-xylose-arabinose-fucose","Os03g0828500","Transcript","moderately similar to ( 395) AT5G66460 | Symbols: | (1-4)-beta-mannan endohydrolase, putative | chr5:26538911-26540837 REVERSECOG3934 protein|OsMan05 - Endo-Beta-Mannanase, expressed",1.0549212,null,"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os05g0261700","Transcript","moderately similar to ( 490) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEvery weakly similar to (95.1) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|SHR5-receptor-like kinase, putative, expressed",2.650769,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0471800","Transcript","weakly similar to ( 181) AT1G45207 | Symbols: | remorin family protein | chr1:17130703-17133548 REVERSE protein|remorin C-terminal domain containing protein, putative, expressed",3.6115944]
[null,"10.6.2","cell wall.degradation.mannan-xylose-arabinose-fucose","Os04g0640700","Transcript","nearly identical (1093) AT5G64570 | Symbols: XYL4, ATBXL4 | XYL4; hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase | chr5:25810227-25813309 REVERSEmoderately similar to ( 469) XYNB_PRUPE Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach)BglX Glyco_hydro_3 Glyco_hydro_3_C protein|beta-D-xylosidase, putative, expressed",4.935722,null,"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0515800","Transcript","moderately similar to ( 398) AT4G38160 | Symbols: pde191 | pde191 (pigment defective 191) | chr4:17902412-17903784 FORWARD mTERF protein|mTERF domain containing protein, expressed",2.3015]
[null,"10.6.2","cell wall.degradation.mannan-xylose-arabinose-fucose","Os03g0243700","Transcript","highly similar to ( 627) AT4G38650 | Symbols: | glycosyl hydrolase family 10 protein | chr4:18063377-18065769 FORWARDGlyco_10 Glyco_hydro_10 XynA protein|glycosyl hydrolase family 10 protein, putative, expressed",2.6563866,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0533000","Transcript","moderately similar to ( 201) AT2G03200 | Symbols: | aspartyl protease family protein | chr2:966506-967891 REVERSE Asp protein|aspartic proteinase nepenthesin precursor, putative, expressed",2.0685098]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os01g0618900","Transcript","highly similar to ( 542) AT4G23820 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr4:12397217-12400050 REVERSEPGU1 Glyco_hydro_28 protein|polygalacturonase, putative, expressed",2.7548828,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0308800","Transcript","moderately similar to ( 468) AT5G14210 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:4578503-4581374 REVERSEweakly similar to ( 107) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|expressed protein",4.467394,null,"27.3.99","RNA.regulation of transcription.unclassified","Os09g0423500","Transcript","moderately similar to ( 367) AT1G79720 | Symbols: | aspartyl protease family protein | chr1:29997259-29998951 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.8926609]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os03g0124900","Transcript","highly similar to ( 568) AT3G48950 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr3:18148017-18149987 FORWARDvery weakly similar to (85.9) PGLR3_MAIZE Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize)PGU1 Glyco_hydro_28 protein|polygalacturonase, putative, expressed",1.557772,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os09g0487600","Transcript","highly similar to ( 547) AT3G57790 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr3:21405387-21407088 REVERSEPGU1 Glyco_hydro_28 protein|polygalacturonase, putative, expressed",1.6109462,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947,null,"27.3.99","RNA.regulation of transcription.unclassified","Os01g0598600","Transcript","moderately similar to ( 384) AT1G01300 | Symbols: | aspartyl protease family protein | chr1:117065-118522 FORWARD Asp protein|aspartic proteinase, putative, expressed",1.9372562]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os02g0781000","Transcript","moderately similar to ( 417) AT1G19170 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr1:6616777-6618875 FORWARDPGU1 Glyco_hydro_28 protein|polygalacturonase, putative, expressed",1.5210515,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0478600","Transcript","moderately similar to ( 212) AT3G17640 | Symbols: | leucine-rich repeat family protein | chr3:6032393-6033583 FORWARD protein|polygalacturonase inhibitor 1 precursor, putative, expressed",4.090776,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0481000","Transcript","moderately similar to ( 369) AT1G70150 | Symbols: | zinc ion binding | chr1:26416898-26419521 FORWARD protein|zinc finger protein, putative, expressed",1.2245995]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os07g0568700","Transcript","moderately similar to ( 211) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDhighly similar to ( 610) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor 1 precursor, putative, expressed",1.8588246,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0773700","Transcript","nearly identical (1300) AT5G65700 | Symbols: BAM1 | BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase | chr5:26281826-26284945 FORWARDmoderately similar to ( 460) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc TyrKc Pkinase S_TKc PTKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Src_like SPS1 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_Tec_like PTKc_Syk_like PTKc_Ack_like PTKc_Itk PTKc_Tec_Rlk PTKc_Trk PTKc_EGFR_like PTKc_EphR_A2 PTKc_Fes_like PTKc_EphR_B PTKc_InsR_like PTKc_Met_Ron PTKc_Lck_Blk PTKc_Src PTK_HER3 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Btk_Bmx PTKc_Lyn PTKc_EphR_A PTKc_Yes PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Ror PTKc_Jak1_rpt2 PTKc_TrkA PTKc_Axl_like PTKc_Csk PTKc_TrkC PTKc_FGFR PTKc_HER4 PTKc_Chk PTKc_FAK PTKc_EphR_A10 PTKc_TrkB PTKc_Hck PTKc_Fer PTKc_Aatyk PTK_CCK4 PTKc_c-ros protein|receptor protein kinase CLAVATA1 precursor, putative, expressed",4.5269656,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0749800","Transcript","weakly similar to ( 151) AT5G07900 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr5:2520188-2521405 FORWARD mTERF protein|mTERF family protein, expressed",1.5840412]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os01g0636500","Transcript","moderately similar to ( 486) AT1G60590 | Symbols: | polygalacturonase, putative / pectinase, putative | chr1:22314426-22316867 REVERSEmoderately similar to ( 213) PGLR_ACTCH Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao)Glyco_hydro_28 PGU1 protein|polygalacturonase, putative, expressed",1.3535758,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0782100","Transcript","highly similar to ( 828) AT2G34357 | Symbols: | binding | chr2:14499236-14505555 FORWARD NUC173 protein|expressed protein",-1.1639978]
[null,"10.6.3","cell wall.degradation.pectate lyases and polygalacturonases","Os08g0380100","Transcript","moderately similar to ( 484) AT1G70370 | Symbols: | BURP domain-containing protein / polygalacturonase, putative | chr1:26513003-26514998 REVERSEBURP protein|BURP domain containing protein, expressed",4.7776775,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398,null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0610800","Transcript","moderately similar to ( 304) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase, putative, expressed",4.0232925]
[null,10.7,"cell wall.modification","Os04g0604900","Transcript","moderately similar to ( 298) AT4G25810 | Symbols: XTR6, XTH23 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | chr4:13128694-13129715 FORWARDmoderately similar to ( 300) XTH8_ORYSA Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) - Oryza sativa (Rice)GH16_XET Glyco_hydro_16 Glyco_hydrolase_16 GH16_GPI_glucanosyltransferase GH16_lichenase protein|glycosyl hydrolases family 16, putative, expressed",1.0033355,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634,null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0209500","Transcript","highly similar to ( 565) AT1G69420 | Symbols: | zinc finger (DHHC type) family protein | chr1:26093690-26096736 FORWARD COG5273 zf-DHHC protein|zinc finger family protein, putative, expressed",1.6984292]
[null,10.7,"cell wall.modification","Os10g0542400","Transcript","moderately similar to ( 255) AT3G45970 | Symbols: ATEXLA1, EXPL1, ATEXPL1, ATHEXP BETA 2.1 | ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) | chr3:16896238-16897189 FORWARDmoderately similar to ( 446) EXLA2_ORYSA Expansin-like A2 precursor (OsEXLA2) (OsEXPL2) (OsaEXPb2.2) - Oryza sativa (Rice) protein|expansin precursor, putative, expressed",2.08093,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os05g0522600","Transcript","highly similar to ( 746) AT5G25930 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr5:9050880-9053978 FORWARDmoderately similar to ( 373) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) S_TKc S_TKc Pkinase_Tyr PTKc Pkinase TyrKc PTKc_EphR SPS1 PTKc_Trk PTKc_Jak_rpt2 PTKc_Musk PTKc_EphR_A2 PTKc_InsR_like PTKc_DDR PTKc_Ror PTKc_Csk_like PTKc_EphR_B PTK_CCK4 PTKc_Srm_Brk PTKc_Src_like PTKc_EphR_A PTKc_EGFR_like PTKc_TrkC PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Abl PTKc_TrkA PTKc_Ack_like PTKc_Syk_like PTKc_FGFR4 PTKc_DDR_like PTKc_Fes_like PTKc_FGFR PTKc_DDR1 PTKc_Src PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_Met_Ron PTKc_Fyn_Yrk PTKc_TrkB PTKc_ALK_LTK PTKc_c-ros protein|receptor-like protein kinase 5 precursor, putative, expressed",-1.2118931,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0521400","Transcript","weakly similar to ( 192) AT1G67325 | Symbols: | binding / zinc ion binding | chr1:25209825-25212412 REVERSE protein|zinc finger family protein, putative, expressed",-1.0846679]
[null,10.7,"cell wall.modification","Os03g0102700","Transcript","weakly similar to ( 117) AT1G65680 | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2) | chr1:24427266-24428399 FORWARDmoderately similar to ( 285) EXPB7_ORYSA Expansin-B7 precursor (OsEXPB7) (Beta-expansin-7) (OsaEXPb1.12) - Oryza sativa (Rice) protein|expansin precursor, putative, expressed",3.442166,null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0720900","Transcript","moderately similar to ( 249) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase nepenthesin-1 precursor, putative, expressed",1.9263893]
[null,10.7,"cell wall.modification","Os04g0631200","Transcript","GH16_XET protein|glycosyl hydrolases family 16 protein, protein, expressed",1.5406297,null,"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0324100","Transcript","weakly similar to ( 121) AT3G56330 | Symbols: | N2,N2-dimethylguanosine tRNA methyltransferase family protein | chr3:20890250-20891933 FORWARD protein|N-dimethylguanosine tRNA methyltransferase, putative, expressed",1.3304576]
[null,10.7,"cell wall.modification","Os06g0621900","Transcript","moderately similar to ( 298) AT4G38210 | Symbols: ATEXPA20, EXP20, ATEXP20, ATHEXP ALPHA 1.23 | ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20) | chr4:17922975-17923821 REVERSEmoderately similar to ( 482) EXP16_ORYSA Expansin-A16 precursor (OsEXPA16) (Alpha-expansin-16) (OsEXP16) (OsaEXPa1.27) - Oryza sativa (Rice)Pollen_allerg_1 protein|expansin precursor, putative, expressed",2.0634649,null,"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0520700","Transcript","moderately similar to ( 290) AT5G63830 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 339 Blast hits to 334 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 84; Plants - 29; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr5:25543585-25544802 REVERSE protein|HIT zinc finger domain containing protein, expressed",-0.9866403]
[null,10.7,"cell wall.modification","Os03g0132200","Transcript","moderately similar to ( 228) AT3G45970 | Symbols: ATEXLA1, EXPL1, ATEXPL1, ATHEXP BETA 2.1 | ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) | chr3:16896238-16897189 FORWARDmoderately similar to ( 370) EXLA1_ORYSA Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) protein|expansin precursor, putative, expressed",2.0098898,null,"30.2.16","signalling.receptor kinases.Catharanthus roseus-like RLK1","Os03g0281500","Transcript","highly similar to ( 748) AT3G46290 | Symbols: | protein kinase, putative | chr3:17013009-17015501 FORWARDmoderately similar to ( 264) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Src_like PTK_CCK4 PTKc_Met_Ron PTKc_Itk PTKc_EphR PTKc_Tec_like PTKc_FGFR PTKc_Csk PTKc_Frk_like PTKc_Ror PTKc_Fer PTKc_TrkA PTKc_InsR_like PTKc_TrkB PTKc_Syk_like PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_FGFR1 PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Tie1 PTKc_FGFR4 PTKc_FGFR2 PTKc_TrkC PTKc_Chk PTKc_Fyn_Yrk PTKc_RET PTKc_Src PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Lyn PTKc_EGFR_like PTKc_FGFR3 PTKc_Axl_like PTKc_Lck_Blk PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_Abl PTKc_Tec_Rlk PTKc_Fes PTKc_FAK PTKc_Yes PTKc_Tie PTKc_IGF-1R PTKc_EphR_B PTKc_InsR PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Hck PTK_Ryk PTK_HER3 PTKc_EphR_A PTKc_Ror1 protein|TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed",-1.0393327,null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0404000","Transcript","highly similar to ( 545) AT4G02990 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr4:1322158-1323783 FORWARD mTERF protein|mTERF domain containing protein, expressed",1.3906912]
[null,10.7,"cell wall.modification","Os10g0555700","Transcript","moderately similar to ( 213) AT1G65680 | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2) | chr1:24427266-24428399 FORWARDhighly similar to ( 545) EXPB2_ORYSA Expansin-B2 precursor (OsEXPB2) (Beta-expansin-2) (OsaEXPb1.9) - Oryza sativa (Rice)Pollen_allerg_1 protein|expansin precursor, putative, expressed",2.6665137,null,"30.2.17","signalling.receptor kinases.DUF 26","Os05g0442550","Transcript","moderately similar to ( 328) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDhighly similar to ( 697) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 rve protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.3304685,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0488100","Transcript","weakly similar to ( 186) AT5G23290 | Symbols: PDF5 | PDF5 (PREFOLDIN 5); unfolded protein binding | chr5:7846144-7847428 FORWARD Prefoldin_alpha Prefoldin protein|prefoldin, putative, expressed",-1.0586424]
[null,10.7,"cell wall.modification","Os06g0725300","Transcript","weakly similar to ( 171) AT4G38400 | Symbols: ATEXLA2, EXPL2, ATEXPL2, ATHEXP BETA 2.2 | ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2) | chr4:17978675-17979665 REVERSEhighly similar to ( 553) EXLA4_ORYSA Expansin-like A4 precursor (OsEXLA4) (OsEXPL4) - Oryza sativa (Rice) protein|expansin precursor, putative, expressed",2.522997,null,"30.2.17","signalling.receptor kinases.DUF 26","Os12g0456000","Transcript","moderately similar to ( 230) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDmoderately similar to ( 285) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.9853998,null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0120200","Transcript","weakly similar to ( 143) AT2G02170 | Symbols: | remorin family protein | chr2:556595-558610 REVERSERemorin_C protein|remorin family protein, putative, expressed",2.2569926]
[null,10.7,"cell wall.modification","Os02g0744200","Transcript","moderately similar to ( 296) AT2G03090 | Symbols: ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3 | ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) | chr2:917361-918554 REVERSEmoderately similar to ( 374) EXPA5_ORYSA Expansin-A5 precursor (OsEXPA5) (Alpha-expansin-5) (OsEXP5) (OsaEXPa1.20) - Oryza sativa (Rice)Pollen_allerg_1 DPBB_1 protein|expansin precursor, putative, expressed",2.7205048,null,"30.2.17","signalling.receptor kinases.DUF 26","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613,null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0208900","Transcript","moderately similar to ( 211) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.0023584]
[null,10.7,"cell wall.modification","Os08g0237000","Transcript","moderately similar to ( 273) AT5G57550 | Symbols: XTR3 | XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | chr5:23305055-23306384 REVERSEhighly similar to ( 532) XTH8_ORYSA Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5) - Oryza sativa (Rice)GH16_XET Glyco_hydro_16 Glyco_hydrolase_16 GH16_GPI_glucanosyltransferase protein|glycosyl hydrolases family 16, putative, expressed",2.0468712,null,"30.2.19","signalling.receptor kinases.legume-lectin","Os02g0640500","Transcript","highly similar to ( 582) AT2G37710 | Symbols: RLK | RLK (receptor lectin kinase); kinase | chr2:15814934-15816961 REVERSEweakly similar to ( 196) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Lectin_legB Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_EphR PTKc_Jak_rpt2 SPS1 PTKc_EphR_A2 PTKc_Tec_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Src_like PTKc_EGFR_like PTKc_EphR_B PTKc_Csk_like PTKc_EphR_A PTKc_Syk_like PTKc_Trk PTKc_Abl PTKc_Itk PTKc_FAK PTKc_Btk_Bmx PTKc_Fes_like PTKc_Tec_Rlk PTKc_Ack_like PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_InsR_like PTKc_DDR PTKc_Chk PTKc_Aatyk PTKc_Ror PTKc_Csk PTKc_c-ros PTKc_Axl_like PTK_HER3 PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Fes PTK_CCK4 PTKc_Yes PTKc_Musk PTKc_Lyn PTKc_FGFR PTKc_Met_Ron PTKc_HER4 protein|lectin receptor-type protein kinase, putative, expressed",1.3651978,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0208200","Transcript","very weakly similar to (87.0) AT4G30030 | Symbols: | aspartyl protease family protein | chr4:14682210-14683484 REVERSE protein|expressed protein",2.2369096]
[null,10.7,"cell wall.modification","Os06g0696566","Transcript","moderately similar to ( 295) AT4G25810 | Symbols: XTR6, XTH23 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | chr4:13128694-13129715 FORWARDmoderately similar to ( 289) BRU1_SOYBN Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean)GH16_XET Glyco_hydro_16 Glyco_hydrolase_16 GH16_GPI_glucanosyltransferase GH16_lichenase protein|glycosyl hydrolases family 16, putative, expressed",2.2583885,null,"30.2.22","signalling.receptor kinases.proline extensin like","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078,null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0396300","Transcript","moderately similar to ( 395) AT5G45550 | Symbols: | mob1/phocein family protein | chr5:18462284-18464840 FORWARD Mob1_phocein protein|mps one binder kinase activator-like 1A, putative, expressed",0.97349644]
[null,10.7,"cell wall.modification","Os10g0577500","Transcript","moderately similar to ( 294) AT1G32170 | Symbols: XTR4, XTH30 | XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | chr1:11575434-11577776 FORWARDweakly similar to ( 157) XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis)GH16_XET Glyco_hydro_16 Glyco_hydrolase_16 protein|glycosyl hydrolases family 16, putative, expressed",1.7995996,null,"30.2.22","signalling.receptor kinases.proline extensin like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613,null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0212200","Transcript","moderately similar to ( 476) AT3G63140 | Symbols: CSP41A | CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | chr3:23327006-23328620 REVERSEWcaG protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",2.8568566]
[null,10.7,"cell wall.modification","Os03g0239000","Transcript","moderately similar to ( 386) AT1G14720 | Symbols: XTR2, EXGT-A2, ATXTH28 | XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | chr1:5066806-5068466 REVERSEweakly similar to ( 185) XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat)GH16_XET Glyco_hydro_16 Glyco_hydrolase_16 GH16_GPI_glucanosyltransferase GH16_lichenase protein|glycosyl hydrolases family 16, putative, expressed",2.0355434,null,"30.2.22","signalling.receptor kinases.proline extensin like","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0504700","Transcript","weakly similar to ( 108) AT3G12630 | Symbols: | zinc finger (AN1-like) family protein | chr3:4012707-4013189 FORWARDweakly similar to ( 156) ISAP1_ORYSA Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) protein|AN1-like zinc finger domain containing protein, expressed",-1.1219383]
[null,"10.8.2","cell wall.pectin*esterases.acetyl esterase","Os01g0319000","Transcript","moderately similar to ( 494) AT2G46930 | Symbols: | pectinacetylesterase, putative | chr2:19283625-19286090 FORWARD PAE protein|pectinacetylesterase domain containing protein, expressed",1.2012981,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0127700","Transcript","weakly similar to ( 119) AT4G00960 | Symbols: | protein kinase family protein | chr4:414361-416180 FORWARD protein|TKL_IRAK_DUF26-lg.1 - DUF26 kinases have homology to DUF26 containing loci, expressed",-0.977979]
[{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126,null,27.1,"RNA.processing","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927]
[null,26.1,"misc.misc2","Os08g0238200","Transcript","moderately similar to ( 213) AT3G23570 | Symbols: | dienelactone hydrolase family protein | chr3:8458052-8459608 REVERSEmoderately similar to ( 247) E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) DLH COG0412 protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",5.3119807,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0117200","Transcript","moderately similar to ( 304) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 180) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Tec_like PTKc_Itk SPS1 PTKc_EGFR_like PTKc_Axl_like PTKc_Csk_like PTKc_EphR_A2 PTKc_Btk_Bmx PTKc_Frk_like PTKc_EphR_B PTKc_EphR_A PTKc_InsR_like PTKc_Ack_like PTKc_Fyn_Yrk PTKc_Src PTKc_FGFR PTKc_Fes_like PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Trk PTKc_Ror PTKc_Yes PTKc_Chk PTKc_ALK_LTK PTKc_Tec_Rlk PTKc_Lck_Blk PTKc_EphR_A10 PTKc_DDR PTK_HER3 PTKc_Tie1 PTKc_c-ros PTKc_Tie2 PTKc_Aatyk PTKc_DDR_like PTKc_Csk PTKc_Axl PTKc_Zap-70 PTKc_DDR1 PTKc_DDR2 PTKc_FAK PTKc_Tie PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Lyn PTKc_Ror1 PTKc_Fer PTKc_Syk PTKc_TrkA protein|TAK33, putative, expressed",-2.0088966,null,27.1,"RNA.processing","Os01g0184000","Transcript","moderately similar to ( 354) AT5G11010 | Symbols: | pre-mRNA cleavage complex-related | chr5:3484176-3486067 FORWARD NUC156 COG1341 protein|expressed protein",-0.98764485]
[null,26.1,"misc.misc2","Os11g0275200","Transcript","weakly similar to ( 196) AT3G23570 | Symbols: | dienelactone hydrolase family protein | chr3:8458052-8459608 REVERSEmoderately similar to ( 264) E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) COG0412 DLH protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",1.7750632,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0541500","Transcript","moderately similar to ( 307) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 142) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR PTKc_Syk_like PTKc_Csk_like PTKc_Src_like PTKc_Ror SPS1 PTKc_EphR_A2 PTKc_Trk PTKc_Srm_Brk PTKc_HER4 PTKc_Met_Ron PTKc_EGFR PTKc_Axl_like PTKc_Itk PTKc_ALK_LTK PTKc_Tec_like PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EphR_A PTKc_Lck_Blk PTKc_EphR_B PTKc_Jak1_rpt2 protein|TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.3138751,null,27.1,"RNA.processing","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584]
[null,26.1,"misc.misc2","Os01g0555800","Transcript","moderately similar to ( 275) AT1G15390 | Symbols: PDF1A, ATDEF1 | PDF1A (PEPTIDE DEFORMYLASE 1A); peptide deformylase | chr1:5294653-5295625 FORWARD Pep_deformylase def Def PRK12846 Pep_deformylase protein|peptide deformylase, putative, expressed",2.7440684,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os12g0527700","Transcript","moderately similar to ( 373) AT1G34300 | Symbols: | lectin protein kinase family protein | chr1:12503450-12505939 FORWARDhighly similar to ( 638) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase S_TKc S_TKc TyrKc Pkinase_Tyr PTKc PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Itk PTKc_EphR B_lectin B_lectin PTKc_EphR_A2 PTKc_Trk PTKc_Tec_like PTKc_Ror PTKc_Lck_Blk B_lectin PTKc_Chk PTKc_Src PTKc_Tie2 PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_InsR_like PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Fes_like PTKc_Tie1 PTKc_Ror1 PTKc_TrkA PTKc_Abl PTKc_Yes PTKc_Fes protein|S-locus-like receptor protein kinase, putative, expressed",-1.533811,null,27.1,"RNA.processing","Os12g0102600","Transcript","highly similar to ( 560) AT3G09650 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040 FORWARDweakly similar to ( 134) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|HCF152, putative, expressed",2.2363338]
[null,26.1,"misc.misc2","Os01g0764900","Transcript","highly similar to ( 719) AT4G37560 | Symbols: | formamidase, putative / formamide amidohydrolase, putative | chr4:17646489-17648457 FORWARDFmdA_AmdA COG2421 protein|acetamidase, putative, expressed",-1.3786181,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0470500","Transcript","moderately similar to ( 339) AT1G70530 | Symbols: | protein kinase family protein | chr1:26588750-26591379 REVERSEweakly similar to ( 199) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Src_like PTKc_Srm_Brk PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_EphR_A2 PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Lck_Blk PTKc_Lyn PTKc_Tec_like PTKc_Itk PTKc_Fes_like PTKc_DDR PTKc_Abl PTKc_Src PTKc_EphR_B PTKc_EphR_A PTKc_FGFR PTKc_Fyn_Yrk PTKc_Ror PTKc_Tyk2_rpt2 PTK_CCK4 PTKc_InsR_like PTKc_Musk PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Ror1 PTKc_EGFR_like PTKc_Syk_like PTKc_Yes PTKc_TrkB PTKc_Hck PTKc_TrkC PTKc_Jak1_rpt2 PTKc_Ack_like PTKc_Fer PTKc_TrkA PTKc_DDR_like PTKc_FGFR2 PTK_Ryk PTKc_FGFR4 PTKc_ALK_LTK PTKc_RET PTKc_DDR2 PTKc_DDR1 PTKc_Tec_Rlk PTKc_InsR PTKc_HER4 PTKc_Csk PTKc_FGFR3 PTKc_Ror2 PTKc_c-ros PTKc_EphR_A10 PTKc_PDGFR PTKc_Axl_like PTKc_FAK PTKc_FGFR1 PTKc_Fes PTKc_Syk PTK_HER3 PTKc_Zap-70 PTKc_Tie2 PTKc_Met_Ron protein|TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-2.5822263,null,27.1,"RNA.processing","Os03g0314400","Transcript","moderately similar to ( 349) AT2G13600 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:5671493-5673586 FORWARDvery weakly similar to (95.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.3869253]
[null,26.1,"misc.misc2","Os11g0275500","Transcript","weakly similar to ( 184) AT3G23600 | Symbols: | dienelactone hydrolase family protein | chr3:8473833-8475655 FORWARDmoderately similar to ( 207) E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-) - Zea mays (Maize) DLH COG0412 protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",5.0073223,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606,null,27.1,"RNA.processing","Os01g0354700","Transcript","moderately similar to ( 296) AT5G11010 | Symbols: | pre-mRNA cleavage complex-related | chr5:3484176-3486067 FORWARD NUC156 COG1341 protein|expressed protein",2.0876644]
[null,26.1,"misc.misc2","Os10g0498300","Transcript","weakly similar to ( 151) AT3G51000 | Symbols: | epoxide hydrolase, putative | chr3:18945258-18946499 REVERSE protein|hydrolase, alpha/beta fold family domain containing protein, expressed",2.1591558,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os03g0221700","Transcript","highly similar to ( 657) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 240) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase S_TKc Pkinase_Tyr TyrKc PTKc S_locus_glycop SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk PTKc_EphR PTKc_Frk_like PTKc_Srm_Brk PTKc_Trk B_lectin B_lectin PTKc_FGFR PTKc_EGFR_like B_lectin PTKc_Lyn PTKc_Lck_Blk PTKc_Fes_like PTKc_Ror PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_EphR_A2 PTKc_EphR_A PTKc_TrkB PTKc_Musk PTKc_Fer PTKc_ALK_LTK PTKc_Axl_like PTKc_DDR PTKc_EphR_B PTK_HER3 PTKc_TrkC PTKc_Abl PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Syk_like PTKc_EphR_A10 PTKc_Fes PTKc_Btk_Bmx PTK_CCK4 PTKc_Src PTKc_Tec_Rlk PTKc_RET PTKc_c-ros PTKc_Chk PTKc_Yes PTKc_Csk PTKc_FGFR3 PTKc_Hck PTKc_Jak1_rpt2 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",2.5693429,null,27.1,"RNA.processing","Os07g0688500","Transcript","moderately similar to ( 403) AT3G06560 | Symbols: | polynucleotide adenylyltransferase/ protein binding | chr3:2044443-2047034 FORWARD PAP_central PAP1 protein|expressed protein",-1.3581719]
[null,26.1,"misc.misc2","Os03g0829200","Transcript","moderately similar to ( 312) AT4G02340 | Symbols: | epoxide hydrolase, putative | chr4:1035722-1037403 FORWARD PRK03592 MhpC protein|hydrolase, alpha/beta fold family domain containing protein, expressed",-1.7933804,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0103700","Transcript","highly similar to ( 592) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 306) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase TyrKc Pkinase_Tyr PTKc S_TKc PTKc_EphR PTKc_Itk PTKc_Trk PTKc_Csk_like SPS1 PTKc_Frk_like PTKc_Tec_like PTKc_Src_like B_lectin PTKc_DDR PTKc_InsR_like PTKc_Abl B_lectin PTKc_Ror PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_FGFR PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Syk_like PTKc_EphR_A PTKc_Tec_Rlk PTKc_TrkC PTKc_TrkA PTKc_Met_Ron PTKc_ALK_LTK PTK_HER3 PTKc_DDR2 PTKc_Axl_like PTKc_Ack_like PTKc_Musk PTKc_Chk PTKc_c-ros PTKc_TrkB PAN_AP_plant PTKc_Btk_Bmx PTKc_Hck PTKc_Jak2_Jak3_rpt2 B_lectin S_locus_glycop PTKc_RET PTK_CCK4 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",1.1126283,null,27.1,"RNA.processing","Os10g0183900","Transcript","moderately similar to ( 434) AT2G47420 | Symbols: | dimethyladenosine transferase, putative | chr2:19457574-19458777 FORWARD KsgA ksgA rADc RrnaAD protein|dimethyladenosine transferase, putative, expressed",-0.9462512]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0727300","Transcript","highly similar to ( 703) AT4G38270 | Symbols: GAUT3 | GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr4:17938433-17941410 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.0252112,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0672200","Transcript","moderately similar to ( 247) AT4G21390 | Symbols: B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding | chr4:11394458-11397474 REVERSEweakly similar to ( 171) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Chk PTKc_Frk_like PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Axl_like PTKc_EphR_B PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like PTKc_Csk PTKc_Abl PTKc_Ror1 PTKc_Fes_like PTKc_Tec_Rlk PTKc_EphR_A2 PTK_CCK4 protein|cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed",-2.140228,null,27.1,"RNA.processing","Os06g0137600","Transcript","moderately similar to ( 212) AT4G34730 | Symbols: | ribosome-binding factor A family protein | chr4:16570019-16571274 REVERSErbfA RbfA RBFA protein|ribosome-binding factor A, chloroplast precursor, putative, expressed",1.001351]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0712500","Transcript","highly similar to ( 893) AT3G61130 | Symbols: GAUT1, LGT1 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr3:22622399-22625514 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.5540142,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os02g0212900","Transcript","weakly similar to ( 132) AT1G61430 | Symbols: | S-locus protein kinase, putative | chr1:22664669-22667769 REVERSEvery weakly similar to (99.0) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc S_TKc Pkinase_Tyr Pkinase PTKc TyrKc protein|cysteine-rich receptor-like protein kinase 35 precursor, putative, expressed",1.4578999,null,27.1,"RNA.processing","Os12g0156400","Transcript","moderately similar to ( 271) AT1G08370 | Symbols: DCP1, ATDCP1 | DCP1 (decapping 1); m7G(5')pppN diphosphatase/ protein homodimerization | chr1:2638355-2640367 FORWARD DCP1 protein|mRNA-decapping enzyme, putative, expressed",-1.3301319]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0305700","Transcript","moderately similar to ( 270) AT2G16890 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:7316938-7319022 FORWARDweakly similar to ( 139) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|anthocyanin 3-O-beta-glucosyltransferase, putative, expressed",5.75091,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613,null,27.1,"RNA.processing","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os02g0243300","Transcript","moderately similar to ( 337) AT4G01070 | Symbols: GT72B1, UGT72B1 | GT72B1; UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups | chr4:461858-463300 REVERSEweakly similar to ( 143) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",3.875913,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822,null,27.1,"RNA.processing","Os03g0833700","Transcript","moderately similar to ( 417) AT5G22100 | Symbols: | RNA cyclase family protein | chr5:7329015-7330718 FORWARD RNA_Cyclase_Class_I RTC RNA_Cyclase RCL1 RNA_Cyclase_Class_II PRK04204 RTC_insert EPT_RTPC-like protein|RNA 3-terminal phosphate cyclase, putative, expressed",-1.1080414]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0489200","Transcript","moderately similar to ( 274) AT1G22360 | Symbols: AtUGT85A2 | AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups | chr1:7895068-7897527 REVERSEweakly similar to ( 161) UFOG_SOLME Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) - Solanum melongena (Eggplant) (Aubergine) UDPGT protein|cytokinin-O-glucosyltransferase 2, putative, expressed",-2.356139,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0408900","Transcript","moderately similar to ( 373) AT1G70740 | Symbols: | protein kinase family protein | chr1:26673847-26675687 REVERSEmoderately similar to ( 203) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Trk SPS1 PTKc_EphR PTKc_Csk_like PTKc_Ror PTKc_Fes_like PTKc_Srm_Brk PTKc_InsR_like PTKc_Frk_like PTKc_Syk_like PTKc_Src_like PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_TrkA PTKc_Lck_Blk PTKc_EGFR_like PTKc_Abl PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Ror2 PTKc_DDR PTKc_c-ros PTKc_Itk PTKc_FGFR3 PTKc_EphR_B PTKc_RET PTKc_PDGFR PTKc_FGFR4 PTKc_Chk PTKc_Ror1 PTKc_FGFR2 PTKc_EphR_A2 PTKc_EphR_A PTKc_Fer PTKc_Lyn PTKc_Tie2 PTKc_Src PTKc_DDR1 PTKc_Met_Ron PTKc_DDR2 PTKc_FGFR1 PTKc_Axl_like PTKc_Yes PTKc_DDR_like PTKc_FAK PTKc_InsR PTKc_Fes PTKc_Jak1_rpt2 PTKc_Tie1 protein|TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.0385976,null,27.1,"RNA.processing","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os02g0207100","Transcript","weakly similar to ( 126) AT2G36760 | Symbols: UGT73C2 | UGT73C2 (UDP-glucosyl transferase 73C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:15413042-15414532 REVERSEvery weakly similar to (80.9) IAAG_MAIZE Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) protein|glucosyltransferase, putative, expressed",-1.156537,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0550500","Transcript","moderately similar to ( 217) AT1G11350 | Symbols: CBRLK1, SD1-13, RKS2 | SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase | chr1:3817725-3820752 REVERSEweakly similar to ( 184) SLSG3_BRAOL S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage)B_lectin B_lectin B_lectin protein|S-locus-specific glycoprotein S13 precursor, putative, expressed",-1.4175048,null,27.1,"RNA.processing","Os08g0278750","Transcript","protein|expressed protein",1.5307689]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0597800","Transcript","moderately similar to ( 360) AT2G15490 | Symbols: UGT73B4 | UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr2:6761750-6763398 FORWARDweakly similar to ( 165) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed",-2.084027,null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0542400","Transcript","moderately similar to ( 445) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 199) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc PTKc Pkinase_Tyr S_TKc Pkinase S_TKc SPS1 PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like PTKc_Ror PTKc_Src_like PTKc_InsR_like PTKc_Tec_like PTKc_Trk PTKc_EphR PTKc_c-ros PTKc_Frk_like PTKc_Syk_like PTKc_Musk PTKc_RET PTKc_ALK_LTK PTKc_Lck_Blk PTKc_FGFR PTKc_Ack_like PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EGFR_like PTKc_Chk PTKc_Ror2 PTKc_Itk PTKc_Axl_like PTKc_Btk_Bmx PTKc_Ror1 PTKc_TrkB PTKc_Tec_Rlk PTKc_Lyn PTKc_TrkC PTKc_Fes_like PTKc_Axl PTKc_FGFR4 PTKc_PDGFR PTKc_Met_Ron PTK_CCK4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Jak1_rpt2 PTKc_Hck PTKc_TrkA PTKc_Tyk2_rpt2 PTKc_EphR_A2 PTKc_Tie2 PTKc_FGFR1 PTKc_EphR_A PTKc_FGFR3 PTKc_IGF-1R PTKc_DDR_like PTKc_FAK PTKc_Src PTK_HER3 PTK_Ryk PTKc_FGFR2 PTKc_Yes PTKc_InsR PTKc_Csk PTKc_DDR2 PTKc_EGFR PTKc_Tie PTKc_Syk PTKc_Tyro3 PTKc_Zap-70 PTKc_DDR1 PTKc_Tie1 PTKc_Fes PTKc_Fer PTKc_HER4 PTKc_EphR_A10 PTKc_Aatyk PTKc_VEGFR PTKc_HER2 protein|TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.1601444,null,27.1,"RNA.processing","Os02g0757900","Transcript","moderately similar to ( 217) AT5G10350 | Symbols: | polyadenylate-binding protein family protein / PABP family protein | chr5:3255674-3257746 REVERSE protein|RNA recognition motif containing protein, putative, expressed",-1.0344414]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os03g0359600","Transcript","moderately similar to ( 445) AT3G06260 | Symbols: GATL4 | GATL4 (Galacturonosyltransferase-like 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr3:1893804-1894859 REVERSEGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",3.041989,null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os08g0378000","Transcript","very weakly similar to (82.8) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|wall-associated kinase-like 2, putative, expressed",-2.227124,null,27.1,"RNA.processing","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0510400","Transcript","moderately similar to ( 258) AT3G21800 | Symbols: UGT71B8 | UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr3:7680243-7681685 REVERSEweakly similar to ( 143) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|anthocyanidin 5,3-O-glucosyltransferase, putative, expressed",6.042833,null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os01g0364800","Transcript","weakly similar to ( 155) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARD protein|OsWAK7 - OsWAK receptor-like protein kinase, expressed",-1.7365016,null,27.1,"RNA.processing","Os09g0570600","Transcript","weakly similar to ( 192) AT3G45750 | Symbols: | unknown protein | chr3:16793855-16797380 REVERSE protein|expressed protein",-1.0293239]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0187500","Transcript","moderately similar to ( 214) AT2G15480 | Symbols: UGT73B5 | UGT73B5 (UDP-glucosyl transferase 73B5); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | chr2:6758817-6760452 FORWARDweakly similar to ( 132) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed",3.2025073,null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os10g0326100","Transcript","weakly similar to ( 129) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|OsWAK113 - OsWAK receptor-like protein OsWAK-RLP, expressed",3.3258743,null,27.1,"RNA.processing","Os08g0506500","Transcript","moderately similar to ( 285) AT5G26880 | Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr5:9457950-9459190 REVERSECspR PRK10358 SpoU_methylase protein|RNA methyltransferase, TrmH family protein, putative, expressed",1.0707711]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0805500","Transcript","moderately similar to ( 313) AT2G30140 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:12872200-12873691 FORWARDweakly similar to ( 154) IAAG_MAIZE Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) UDPGT protein|indole-3-acetate beta-glucosyltransferase, putative, expressed",1.6564116,null,"30.2.99","signalling.receptor kinases.misc","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029,null,27.1,"RNA.processing","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os06g0289900","Transcript","weakly similar to ( 173) AT3G16520 | Symbols: UGT88A1 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:5618847-5620833 REVERSEweakly similar to ( 111) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|anthocyanidin 3-O-glucosyltransferase, putative, expressed",7.8760147,null,"30.2.99","signalling.receptor kinases.misc","Os02g0193000","Transcript","moderately similar to ( 293) AT2G33580 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr2:14219848-14221842 REVERSEweakly similar to ( 139) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc SPS1 PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Chk PTKc_Src_like PTKc_EphR PTKc_Trk PTKc_Frk_like PTKc_Ack_like PTKc_Lck_Blk PTKc_Fes_like protein|LYK8, putative, expressed",-1.1901093,null,27.1,"RNA.processing","Os11g0103000","Transcript","highly similar to ( 579) AT3G09650 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040 FORWARDweakly similar to ( 139) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|HCF152, putative, expressed",2.168548]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os05g0527000","Transcript","moderately similar to ( 308) AT3G16520 | Symbols: UGT88A1 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:5618847-5620833 REVERSEweakly similar to ( 162) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|anthocyanidin 5,3-O-glucosyltransferase, putative, expressed",-3.971136,null,"30.2.99","signalling.receptor kinases.misc","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078,null,"27.1.1","RNA.processing.splicing","Os01g0956600","Transcript","moderately similar to ( 202) AT2G33440 | Symbols: | splicing factor family protein | chr2:14170790-14173226 FORWARD protein|RNA recognition motif containing protein, putative, expressed",3.3051078]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os09g0531900","Transcript","highly similar to ( 913) AT3G61130 | Symbols: GAUT1, LGT1 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | chr3:22622399-22625514 FORWARDGlyco_transf_8 protein|glycosyl transferase family 8, putative, expressed",1.6780645,null,"30.2.99","signalling.receptor kinases.misc","Os04g0370900","Transcript","moderately similar to ( 391) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 163) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase SPS1 PTKc_Csk_like PTKc_Fes_like PTKc_Trk PTKc_RET PTKc_Ror PTKc_Fer PTKc_EphR PTKc_Jak_rpt2 PTKc_TrkA PTKc_Src_like PTKc_Frk_like PTKc_Chk PTKc_InsR_like PTKc_Fes PTKc_Itk PTKc_EGFR_like PTKc_Abl PTKc_Srm_Brk PTKc_FAK PTKc_EphR_A2 PTKc_Tie1 PTKc_ALK_LTK PTKc_Tec_like PTKc_Tie PTKc_Ack_like PTKc_Csk PTKc_FGFR PTKc_Axl_like PTKc_Btk_Bmx PTKc_IGF-1R PTKc_Tec_Rlk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_Met_Ron PTKc_Musk PTKc_EphR_B PTKc_Yes PTKc_Ror1 protein|OsWAK60 - OsWAK receptor-like protein kinase, expressed",-2.1680458,null,"27.1.1","RNA.processing.splicing","Os11g0704700","Transcript","very weakly similar to (92.0) AT3G55460 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid binding / nucleotide binding | chr3:20561024-20563502 FORWARDRRM_1 RRM protein|RNA recognition motif containing protein, expressed",-1.0936791]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0556500","Transcript","weakly similar to ( 170) AT2G31750 | Symbols: UGT74D1 | UGT74D1 (UDP-glucosyl transferase 74D1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:13497312-13499870 FORWARDhighly similar to ( 628) CZOG1_MAIZE Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1) - Zea mays (Maize) protein|cis-zeatin O-glucosyltransferase, putative, expressed",-1.454739,null,"30.2.99","signalling.receptor kinases.misc","Os04g0288500","Transcript","moderately similar to ( 275) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 153) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase S_TKc Lectin_legB Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Ror PTKc_Srm_Brk PTKc_EphR_B PTKc_Trk PTKc_Syk_like PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_EphR_A2 PTKc_Abl PTKc_Src_like PTKc_Fes_like PTKc_EphR_A PTKc_Tec_like PTKc_InsR_like PTKc_Frk_like PTKc_Itk PTKc_TrkA PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Fes PTKc_Fer PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Ror2 PTKc_TrkC PTKc_Zap-70 PTKc_DDR PTK_Jak2_Jak3_rpt1 PTKc_FAK protein|protein kinase, putative, expressed",-2.1872857,null,"27.1.1","RNA.processing.splicing","Os05g0120100","Transcript","weakly similar to ( 199) AT2G37340 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding | chr2:15670372-15672331 REVERSE protein|splicing factor, arginine/serine-rich 7, putative, expressed",-0.9787833]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0613700","Transcript","highly similar to ( 695) AT1G31070 | Symbols: | UDP-N-acetylglucosamine pyrophosphorylase-related | chr1:11084951-11088361 FORWARD COG4284 UDPGP protein|UTP--glucose-1-phosphate uridylyltransferase, putative, expressed",1.5049185,null,"30.2.99","signalling.receptor kinases.misc","Os02g0154200","Transcript","highly similar to ( 761) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 635) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc Pkinase PTKc S_TKc S_TKc PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EGFR_like PTKc_InsR_like PTKc_Tec_like PTKc_Yes SPS1 PTKc_TrkA PTKc_EphR_A2 PTKc_Syk_like PTKc_Lyn PTKc_Src PTKc_Lck_Blk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_Csk PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Hck PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_Axl_like PTKc_EphR_A PTKc_Ror PTKc_EphR_B PTKc_Tec_Rlk PTK_CCK4 PTKc_Btk_Bmx PTKc_DDR PTKc_Chk PTKc_Ack_like PTKc_c-ros PTKc_IGF-1R PTKc_Met_Ron PTKc_RET PTKc_ALK_LTK PTKc_Tie1 PTKc_Tie2 PTKc_Tie PTKc_InsR protein|phytosulfokine receptor precursor, putative, expressed",1.4195126,null,"27.1.1","RNA.processing.splicing","Os07g0633200","Transcript","weakly similar to ( 118) AT1G55310 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding / protein binding | chr1:20630676-20632567 FORWARD protein|RNA recognition motif containing protein, putative, expressed",-1.363359]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0530900","Transcript","moderately similar to ( 341) AT1G13250 | Symbols: GATL3 | GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr1:4528965-4530002 REVERSEGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",2.4195888,null,"30.2.99","signalling.receptor kinases.misc","Os04g0371200","Transcript","moderately similar to ( 256) AT1G16150 | Symbols: WAKL4 | WAKL4 (WALL ASSOCIATED KINASE-LIKE 4); kinase | chr1:5532415-5534877 FORWARDweakly similar to ( 169) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc S_TKc PTKc S_TKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Csk_like PTKc_Trk PTKc_EphR PTKc_Chk PTKc_Fes_like PTKc_EGFR_like PTKc_Frk_like PTKc_Met_Ron PTKc_TrkB PTKc_Fes PTKc_Src_like PTKc_Syk_like PTKc_Tec_like PTKc_InsR_like PTKc_TrkA PTKc_Srm_Brk PTKc_EphR_A2 PTKc_Fer PTKc_Ack_like PTKc_Itk PTKc_EphR_B PTKc_Ror PTKc_Abl PTKc_FAK PTKc_TrkC PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Musk PTKc_Axl_like protein|protein kinase domain containing protein, expressed",-1.3237983,null,"27.1.2","RNA.processing.RNA helicase","Os09g0520700","Transcript","highly similar to ( 697) AT5G62190 | Symbols: PRH75 | PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding | chr5:24980542-24983879 REVERSEhighly similar to ( 708) RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) SrmB PRK11776 PRK04837 PRK11192 PRK04537 PRK11634 DEADc PRK10590 PRK01297 DEAD DEXDc GUCT DEXDc HELICc COG1205 Lhr Helicase_C COG1202 HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase 7, putative, expressed",-1.5360321]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os05g0500000","Transcript","moderately similar to ( 218) AT4G34131 | Symbols: UGT73B3 | UGT73B3 (UDP-glucosyl transferase 73B3); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring hexosyl groups | chr4:16343268-16344713 REVERSEweakly similar to ( 153) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed",5.281033,null,"30.2.99","signalling.receptor kinases.misc","Os01g0690800","Transcript","moderately similar to ( 405) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 192) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc PTKc_Csk_like PTKc_EphR PTKc_Src_like PTKc_Tec_like PTKc_EGFR_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_Jak_rpt2 PTKc_Itk PTKc_Trk PTKc_Abl PTKc_Frk_like PTKc_FGFR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Syk_like PTKc_Ror PTKc_Ack_like PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Chk PTKc_Lyn PTKc_Axl_like PTKc_Src PTKc_DDR PTKc_EphR_A2 PTKc_Met_Ron PTKc_PDGFR PTKc_Jak2_Jak3_rpt2 PTKc_FGFR4 PTKc_Tie2 PTKc_Yes PTKc_c-ros PTKc_Fer PTKc_EphR_B PTKc_FGFR3 PTKc_InsR PTKc_HER4 PTKc_EphR_A10 PTKc_Hck PTKc_FGFR2 PTKc_DDR_like PTKc_Csk PTKc_EphR_A PTKc_Ror2 PTKc_Tie1 PTKc_EGFR PTKc_HER2 PTKc_RET PTKc_DDR2 PTK_HER3 PTKc_FGFR1 PTKc_FAK PTKc_Jak1_rpt2 PTKc_Fes PTKc_Axl PTKc_Ror1 PTKc_IGF-1R PTKc_DDR1 PTKc_Tie PTKc_Tyro3 PTKc_Tyk2_rpt2 protein|Protein kinase domain containing protein, expressed",-1.2190024,null,"27.1.2","RNA.processing.RNA helicase","Os06g0697200","Transcript","highly similar to ( 789) AT5G51280 | Symbols: | DEAD-box protein abstrakt, putative | chr5:20841456-20843645 FORWARDmoderately similar to ( 239) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 DEADc PRK11192 PRK04837 PRK01297 PRK11634 PRK04537 DEAD DEXDc HELICc DEXDc Lhr Helicase_C HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-2.5212672]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0926600","Transcript","highly similar to ( 709) AT5G61840 | Symbols: GUT1 | GUT1; catalytic/ glucuronoxylan glucuronosyltransferase | chr5:24839365-24841703 REVERSE Exostosin protein|exostosin family domain containing protein, expressed",2.0889995,null,"30.2.99","signalling.receptor kinases.misc","Os04g0599000","Transcript","moderately similar to ( 490) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 208) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk SPS1 PTKc_Tec_like PTKc_Fes_like PTKc_Src_like PTKc_EGFR_like PTKc_Frk_like PTKc_EphR PTKc_Srm_Brk PTKc_Fer PTKc_InsR_like PTKc_Axl_like PTKc_Trk PTKc_DDR PTKc_Tec_Rlk PTKc_Syk_like PTKc_Abl PTKc_Ack_like PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Src PTK_CCK4 PTKc_c-ros PTKc_EphR_A2 PTKc_Lck_Blk PTKc_Fes PTKc_EphR_B PTKc_Tie1 PTKc_IGF-1R PTKc_ALK_LTK PTKc_TrkA PTKc_Axl PTKc_Chk PTKc_PDGFR PTKc_Ror PTKc_RET PTKc_Lyn PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Tie PTKc_Csk PTKc_FGFR PTKc_TrkB PTKc_Musk PTK_HER3 PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_HER4 PTKc_DDR_like PTKc_InsR PTKc_Tyro3 PTKc_TrkC PTKc_Yes PTK_Ryk PTKc_Aatyk PTKc_Ror1 PTKc_Zap-70 PTKc_HER2 PTKc_EGFR PTKc_DDR1 PTKc_Hck PTKc_Syk PTKc_FGFR1 protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed",-1.2069334,null,"27.1.2","RNA.processing.RNA helicase","Os06g0343100","Transcript","nearly identical (1471) AT3G26560 | Symbols: | ATP-dependent RNA helicase, putative | chr3:9750122-9753719 REVERSE HrpA PRK11131 PRK11664 DEXHc DUF1605 HA2 DEXDc DEXDc protein|pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed",-1.0580597]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os11g0461200","Transcript","moderately similar to ( 253) AT5G54010 | Symbols: | glycosyltransferase family protein | chr5:21919819-21921180 REVERSEmoderately similar to ( 421) UFOG_PETHY Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",2.7140121,null,"30.2.99","signalling.receptor kinases.misc","Os04g0127500","Transcript","moderately similar to ( 381) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDweakly similar to ( 174) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc TyrKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Trk SPS1 PTKc_Csk_like PTKc_Frk_like PTKc_Itk PTKc_Fes_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Syk_like PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Axl_like PTKc_InsR_like PTKc_Lck_Blk PTKc_Fer PTKc_Ack_like PTKc_Tec_Rlk PTKc_Abl PTKc_Ror PTKc_DDR PTKc_Src PTKc_EGFR_like PTKc_FAK PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Lyn PTKc_TrkA PTKc_FGFR PTKc_Tyro3 PTKc_c-ros PTKc_PDGFR PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkB PTKc_EphR_A PTKc_Zap-70 PTKc_DDR_like PTKc_Syk PTKc_Yes PTKc_Hck PTKc_Fes PTKc_Ror1 PTKc_RET PTKc_DDR2 PTKc_Axl PTKc_TrkC PTKc_Csk PTKc_Musk PTKc_EphR_B PTKc_Tyk2_rpt2 protein|OsWAK29 - OsWAK receptor-like protein kinase, expressed",-2.4608722,null,"27.1.2","RNA.processing.RNA helicase","Os03g0827700","Transcript","highly similar to ( 827) AT5G26742 | Symbols: emb1138 | emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSEmoderately similar to ( 333) RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) SrmB PRK11776 PRK11192 PRK11634 PRK10590 PRK04837 PRK01297 DEADc PRK04537 DEAD DEXDc DEXDc HELICc GUCT Lhr COG1205 Helicase_C SSL2 HELICc RecQ COG1202 COG1204 protein|DEAD-box ATP-dependent RNA helicase 3, putative, expressed",2.5551713]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os07g0510500","Transcript","moderately similar to ( 249) AT3G21790 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr3:7676927-7678414 REVERSEweakly similar to ( 145) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed",5.8879046,null,"30.2.99","signalling.receptor kinases.misc","Os01g0694000","Transcript","moderately similar to ( 305) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 211) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Srm_Brk PTKc_Src_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Csk_like PTKc_Frk_like PTKc_Fes_like PTKc_Fer PTKc_EGFR_like SPS1 PTKc_TrkA PTKc_Lck_Blk PTKc_Src PTKc_Chk PTKc_Tec_like PTKc_InsR_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_Abl PTKc_Syk_like PTKc_TrkC PTKc_EphR PTKc_Ror PTKc_DDR PTKc_Fyn_Yrk PTKc_Hck PTKc_EphR_A2 PTKc_Itk PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_Yes PTKc_c-ros PTKc_EphR_B PTK_CCK4 PTKc_Tie1 PTKc_EphR_A PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_FGFR PTK_HER3 PTKc_Csk PTKc_Zap-70 PTKc_Tec_Rlk PTKc_Axl PTKc_Fes PTKc_Tie PTKc_HER4 PTKc_Ror2 PTKc_Syk PTKc_Tie2 protein|expressed protein",-1.5088626,null,"27.1.19","RNA.processing.ribonucleases","Os11g0237700","Transcript","weakly similar to ( 175) AT1G55140 | Symbols: | RNA binding / ribonuclease III | chr1:20572788-20574332 REVERSECOG1939 protein|RNA binding protein, putative, expressed",1.082571]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os03g0300900","Transcript","moderately similar to ( 499) AT3G62660 | Symbols: GATL7 | GATL7 (Galacturonosyltransferase-like 7); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr3:23173419-23174504 FORWARDGlyco_transf_8 RfaJ protein|glycosyl transferase 8 domain containing protein, putative, expressed",1.697187,null,"30.2.99","signalling.receptor kinases.misc","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118,null,"27.1.19","RNA.processing.ribonucleases","Os01g0551100","Transcript","RIBOc rnc Rnc RIBOc Ribonuclease_3 protein|ribonuclease III domain protein, putative, expressed",-1.6171036]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0176000","Transcript","moderately similar to ( 429) AT2G36770 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:15415227-15416717 REVERSEweakly similar to ( 186) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed",-2.8266761,null,"30.2.99","signalling.receptor kinases.misc","Os12g0210400","Transcript","highly similar to ( 818) AT1G79620 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:29957633-29962174 REVERSEmoderately similar to ( 233) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Itk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Src_like PTKc_Ror PTKc_EphR PTKc_Srm_Brk PTKc_Trk PTKc_Tec_like PTKc_Frk_like PTKc_Btk_Bmx PTKc_Ack_like SPS1 PTKc_EGFR_like PTKc_Syk_like PTKc_EphR_A2 PTKc_Chk PTKc_Jak1_rpt2 PTKc_Src PTKc_c-ros PTKc_Met_Ron PTKc_TrkB PTKc_Lck_Blk PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_RET PTKc_Tec_Rlk PTKc_Tie PTKc_Tie2 PTKc_Tie1 PTKc_TrkC PTK_CCK4 PTKc_Fyn_Yrk PTKc_Fer PTKc_Yes PTKc_EphR_A PTKc_TrkA PTKc_Abl PTKc_Ror1 PTKc_InsR_like PTKc_EphR_B PTKc_Lyn PTKc_Musk PTKc_ALK_LTK PTKc_Csk PTKc_Fes PTKc_HER2 PTK_HER3 PTKc_DDR PTKc_Zap-70 PTKc_EGFR PTKc_Axl_like PTKc_Syk PTKc_Hck PTKc_FGFR2 PTKc_HER4 PTKc_FGFR1 PTKc_FAK PTKc_FGFR3 PTKc_FGFR4 PTKc_Ror2 protein|leucine-rich repeat family protein, putative, expressed",-1.025217,null,"27.1.19","RNA.processing.ribonucleases","Os09g0537700","Transcript","weakly similar to ( 167) AT1G26820 | Symbols: RNS3 | RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 | chr1:9292760-9293722 REVERSEvery weakly similar to (84.0) RN28_PANGI Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) RNase_T2_euk RNase_T2 Ribonuclease_T2 protein|ribonuclease T2 family domain containing protein, expressed",3.1804707]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0201100","Transcript","moderately similar to ( 441) AT3G15350 | Symbols: | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein | chr3:5167250-5168882 FORWARD Branch protein|xylosyltransferase, putative, expressed",-1.3511261,null,"30.2.99","signalling.receptor kinases.misc","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606,null,"27.1.19","RNA.processing.ribonucleases","Os08g0440300","Transcript","moderately similar to ( 369) AT2G32070 | Symbols: | CCR4-NOT transcription complex protein, putative | chr2:13640829-13641656 REVERSE CAF1 POP2 protein|CAF1 family ribonuclease containing protein, putative, expressed",-1.3003114]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os04g0636100","Transcript","highly similar to ( 645) AT2G20810 | Symbols: GAUT10, LGT4 | GAUT10 (GALACTURONOSYLTRANSFERASE 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr2:8957927-8959610 FORWARDGlyco_transf_8 protein|glycosyl transferase 8 domain containing protein, putative, expressed",-1.0413266,null,"30.2.99","signalling.receptor kinases.misc","Os01g0171000","Transcript","highly similar to ( 848) AT1G60800 | Symbols: NIK3 | NIK3 (NSP-INTERACTING KINASE 3); kinase | chr1:22383601-22386931 REVERSEmoderately similar to ( 270) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc PTKc Pkinase_Tyr S_TKc S_TKc Pkinase PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EphR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_EGFR_like PTKc_Abl PTKc_Src_like PTKc_Tec_like PTKc_Syk_like PTKc_Fer PTKc_Met_Ron PTKc_Frk_like PTKc_Trk PTKc_InsR PTKc_Tie2 PTKc_FGFR PTKc_Itk PTKc_Lyn PTKc_EphR_A2 PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_Ror PTKc_Fes PTKc_Axl_like PTKc_DDR PTKc_c-ros PTKc_RET PTKc_Chk PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_Tie PTKc_Btk_Bmx PTKc_ALK_LTK PTKc_TrkC PTKc_IGF-1R PTKc_Csk PTKc_Ror1 PTKc_EGFR PTKc_Musk protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",1.0357467,null,"27.1.19","RNA.processing.ribonucleases","Os01g0897300","Transcript","moderately similar to ( 238) AT2G39780 | Symbols: RNS2 | RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | chr2:16591256-16593515 FORWARD RNase_T2_euk Ribonuclease_T2 RNase_T2 RNase_T2_prok Rna protein|ribonuclease T2 family domain containing protein, expressed",3.5020783]
[null,26.2,"misc.UDP glucosyl and glucoronyl transferases","Os01g0176200","Transcript","moderately similar to ( 444) AT2G36780 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:15417618-15419108 REVERSEweakly similar to ( 181) ZOX_PHAVU Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) UDPGT protein|flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed",-1.3799456,null,"30.2.99","signalling.receptor kinases.misc","Os07g0494300","Transcript","moderately similar to ( 220) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 159) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase_Tyr S_TKc Pkinase PTKc TyrKc PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Itk PTKc_Src_like PTKc_Csk_like PTKc_Tec_like SPS1 PTKc_Trk PTKc_Srm_Brk PTKc_Syk_like PTKc_Frk_like PTKc_Abl PTKc_Chk PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Fer PTKc_Ror PTKc_Fes PTKc_EGFR_like PTKc_Ack_like PTKc_Csk PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_InsR_like PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Musk protein|OsWAK70 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed",2.8939917,null,"27.1.19","RNA.processing.ribonucleases","Os01g0810100","Transcript","highly similar to ( 758) AT4G37510 | Symbols: | ribonuclease III family protein | chr4:17626259-17628854 REVERSERIBOc RIBOc protein|chloroplast ribonuclease III domain protein, putative, expressed",1.515437]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0513900","Transcript","highly similar to ( 557) AT4G21760 | Symbols: BGLU47 | BGLU47 (Beta-glucosidase 47); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:11561229-11563871 FORWARDmoderately similar to ( 367) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os4bglu18 - monolignol beta-glucoside homologue, expressed",3.3421793,null,"30.2.99","signalling.receptor kinases.misc","Os09g0355400","Transcript","moderately similar to ( 323) AT4G29990 | Symbols: | light repressible receptor protein kinase | chr4:14665802-14669438 REVERSEmoderately similar to ( 249) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Fes_like PTKc_EphR PTKc_Src PTKc_InsR_like PTKc_Jak_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_Itk PTKc_Lck_Blk PTKc_Syk_like PTKc_Lyn PTKc_Ror PTKc_Yes PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Btk_Bmx SPS1 PTKc_Ack_like PTKc_FGFR PTKc_TrkB PTKc_TrkC PTKc_Fer PTKc_Tie2 PTKc_DDR PTKc_Tie1 PTKc_Fes PTK_CCK4 PTKc_ALK_LTK PTKc_PDGFR PTKc_Hck PTKc_c-ros PTKc_Musk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tie PTKc_Tec_Rlk PTKc_Csk PTKc_Abl PTKc_EphR_A2 PTKc_DDR1 PTKc_DDR_like PTKc_EGFR_like PTKc_Axl_like PTKc_DDR2 PTKc_EphR_A PTKc_FGFR1 PTKc_Jak1_rpt2 PTKc_Tyk2_rpt2 PTKc_Aatyk PTKc_EphR_B PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_RET PTKc_Zap-70 PTKc_Ror1 PTKc_IGF-1R protein|protein kinase domain containing protein, expressed",-1.3259019,null,"27.1.19","RNA.processing.ribonucleases","Os09g0538000","Transcript","weakly similar to ( 133) AT1G14220 | Symbols: | ribonuclease T2 family protein | chr1:4858642-4859601 REVERSE RNase_T2_euk Ribonuclease_T2 RNase_T2 protein|ribonuclease T2 family domain containing protein, expressed",8.038064]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os08g0509400","Transcript","moderately similar to ( 457) AT2G44480 | Symbols: BGLU17 | BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr2:18360476-18363001 FORWARDmoderately similar to ( 364) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os8bglu28 - beta-glucosidase homologue, similar to Os4bglu12 exoglucanase, expressed",3.9423048,null,"30.2.99","signalling.receptor kinases.misc","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0511900","Transcript","moderately similar to ( 485) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 321) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu33 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed",3.6288593,null,"30.2.99","signalling.receptor kinases.misc","Os07g0501800","Transcript","highly similar to ( 779) AT1G28340 | Symbols: AtRLP4 | AtRLP4 (Receptor Like Protein 4); protein binding | chr1:9940175-9943252 FORWARDvery weakly similar to (94.0) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) protein|leucine-rich repeat family protein, putative, expressed",3.2734687,null,"29.2.1.1.1.1.5","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5","Os03g0452300","Transcript","moderately similar to ( 209) AT2G33800 | Symbols: | ribosomal protein S5 family protein | chr2:14300925-14302352 REVERSEmoderately similar to ( 209) RR5_SPIOL 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach)rpsE rps5 RpsE Ribosomal_S5_C protein|ribosomal protein, putative, expressed",1.8105879]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os01g0930800","Transcript","moderately similar to ( 464) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 286) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA arb PRK09852 protein|Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed",1.3126802,null,"30.2.99","signalling.receptor kinases.misc","Os04g0430400","Transcript","moderately similar to ( 332) AT3G19300 | Symbols: | protein kinase family protein | chr3:6690242-6693210 REVERSEweakly similar to ( 166) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_Srm_Brk SPS1 PTKc_Csk_like PTKc_Src_like PTKc_EphR PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Frk_like PTKc_Trk PTKc_Chk protein|receptor-like kinase, putative, expressed",2.069229,null,"29.2.1.1.1.1.9","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9","Os03g0769100","Transcript","moderately similar to ( 207) AT1G74970 | Symbols: RPS9, TWN3 | RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome | chr1:28157761-28159202 REVERSEweakly similar to ( 195) RR9_SPIOL 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) rps9 rpsI RpsI Ribosomal_S9 protein|ribosomal protein, putative, expressed",2.3437655]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0511700","Transcript","moderately similar to ( 494) AT1G02850 | Symbols: BGLU11 | BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr1:630569-633085 FORWARDmoderately similar to ( 331) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed",-1.4125928,null,"30.2.99","signalling.receptor kinases.misc","Os09g0353200","Transcript","moderately similar to ( 498) AT1G51860 | Symbols: | leucine-rich repeat protein kinase, putative | chr1:19257634-19261479 REVERSEmoderately similar to ( 211) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Tec_like PTKc_Csk_like PTKc_Frk_like PTKc_Trk PTKc_Itk PTKc_Srm_Brk PTKc_Btk_Bmx PTKc_Src PTKc_Fer PTKc_Ror SPS1 PTKc_Lck_Blk PTKc_Abl PTKc_Tie1 PTKc_Fyn_Yrk PTKc_Yes PTKc_EphR PTKc_Syk_like PTKc_Lyn PTKc_c-ros PTKc_EGFR_like PTKc_Tie PTKc_InsR_like PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Csk PTKc_Tie2 PTKc_Chk PTKc_Fes PTKc_TrkB PTKc_DDR PTKc_Musk PTKc_Axl_like PTKc_TrkA PTKc_TrkC PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_Ror1 PTKc_DDR_like PTKc_ALK_LTK PTKc_Hck PTKc_Met_Ron PTKc_DDR2 PTKc_DDR1 PTKc_EphR_A2 PTK_Ryk PTK_CCK4 PTKc_RET PTKc_EphR_A PTKc_FAK PTKc_EphR_A10 PTKc_PDGFR PTKc_Aatyk PTKc_Jak1_rpt2 PTKc_FGFR1 PTKc_Tyro3 PTKc_FGFR4 PTKc_FGFR3 PTKc_Ror2 PTKc_IGF-1R PTK_HER3 PTKc_EphR_B PTKc_FGFR2 PTKc_Zap-70 protein|expressed protein",-1.3962272,null,"29.2.1.1.1.1.13","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13","Os03g0704000","Transcript","weakly similar to ( 178) AT5G14320 | Symbols: | 30S ribosomal protein S13, chloroplast (CS13) | chr5:4618189-4618772 REVERSEvery weakly similar to ( 100) RT13_SOYBN Small ribosomal subunit protein S13, mitochondrial precursor - Glycine max (Soybean) rpsM RpsM Ribosomal_S13 rps13 rps13p protein|ribosomal protein S13p/S18e, putative, expressed",1.9734036]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0474800","Transcript","moderately similar to ( 460) AT5G44640 | Symbols: BGLU13 | BGLU13 (BETA GLUCOSIDASE 13); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:18011146-18012669 FORWARDmoderately similar to ( 377) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed",1.4347492,null,"30.2.99","signalling.receptor kinases.misc","Os04g0672100","Transcript","highly similar to ( 923) AT2G02220 | Symbols: ATPSKR1, PSKR1 | PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase | chr2:584098-587124 REVERSEhighly similar to ( 904) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_EGFR_like PTKc_InsR_like PTKc_Frk_like PTKc_Trk PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_TrkC PTKc_TrkA PTKc_Itk PTKc_Musk PTKc_Tec_like PTKc_TrkB PTKc_EphR_A PTKc_Syk_like PTKc_Ror PTKc_Met_Ron PTKc_Csk PTKc_Axl_like PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Fyn_Yrk PTKc_Hck PTKc_Btk_Bmx PTKc_Chk PTKc_Yes PTKc_Fes_like PTKc_FGFR PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_Tec_Rlk PTKc_DDR PTKc_Tie2 PTKc_Ack_like PTKc_c-ros protein|phytosulfokine receptor precursor, putative, expressed",-1.2613779,null,"29.2.1.1.1.1.20","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S20","Os01g0678600","Transcript","weakly similar to ( 111) AT3G15190 | Symbols: | chloroplast 30S ribosomal protein S20, putative | chr3:5116216-5117412 FORWARD protein|ribosomal protein rpS20, putative, expressed",2.1842115]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os06g0683300","Transcript","highly similar to ( 721) AT5G54570 | Symbols: BGLU41 | BGLU41 (BETA GLUCOSIDASE 41); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:22167636-22170235 REVERSEmoderately similar to ( 402) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os6bglu25 - beta-glucosidase homologue, similar to Os3bglu6, expressed",1.6149316,null,"30.2.99","signalling.receptor kinases.misc","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398,null,"29.2.1.1.1.1.83","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3","Os04g0461100","Transcript","weakly similar to ( 144) AT1G68590 | Symbols: | plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative | chr1:25757593-25758169 REVERSEweakly similar to ( 195) RRP3_HORVU Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Hordeum vulgare (Barley)PRK02724 PSRP-3_Ycf65 protein|plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed",2.3429642]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os01g0773600","Transcript","highly similar to ( 803) AT5G43710 | Symbols: | glycoside hydrolase family 47 protein | chr5:17552252-17556523 REVERSE Glyco_hydro_47 protein|glycosyl hydrolase family 47 domain contain protein, expressed",-1.3841864,null,"30.2.99","signalling.receptor kinases.misc","Os01g0113200","Transcript","moderately similar to ( 327) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 196) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr PTKc S_TKc Pkinase S_TKc PTKc_Abl PTKc_Src_like PTKc_Csk_like PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Syk_like PTKc_FGFR PTKc_Tec_like PTKc_Frk_like PTKc_Itk PTKc_InsR_like PTKc_Trk PTKc_Ror PTK_HER3 PTKc_Axl_like PTKc_Fes_like PTKc_Hck PTKc_Lck_Blk PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Lyn PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Csk PTKc_Btk_Bmx PTKc_HER4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Ack_like PTKc_c-ros PTKc_InsR PTKc_ALK_LTK PTKc_Fer PTK_CCK4 PTKc_EphR_A10 PTKc_Src PTKc_EphR_A PTKc_EGFR PTKc_Yes PTKc_Met_Ron PTKc_PDGFR PTKc_IGF-1R PTKc_Axl PTKc_HER2 PTKc_Aatyk PTKc_RET PTKc_Ror2 PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_Tie2 PTKc_Zap-70 PTKc_Tyk2_rpt2 PTKc_Syk PTKc_Tie1 PTKc_DDR_like PTKc_FGFR1 PTKc_FAK PTKc_Aatyk1_Aatyk3 PTKc_DDR PTKc_Tie PTKc_Ror1 PTKc_Jak1_rpt2 PTKc_Fes PTKc_Musk protein|Ser/Thr receptor-like kinase, putative, expressed",1.2218553,null,"29.2.1.1.1.2.3","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3","Os02g0137200","Transcript","moderately similar to ( 301) AT2G43030 | Symbols: | ribosomal protein L3 family protein | chr2:17894898-17895713 FORWARDmoderately similar to ( 310) RK3_TOBAC 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) rplC rpl3 RplC Ribosomal_L3 protein|ribosomal protein L3, putative, expressed",1.9851907]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0474500","Transcript","moderately similar to ( 378) AT3G60130 | Symbols: BGLU16 | BGLU16 (BETA GLUCOSIDASE 16); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr3:22210440-22213650 FORWARDmoderately similar to ( 311) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB PRK09852 celA arb protein|Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed",3.0274389,null,"30.2.99","signalling.receptor kinases.misc","Os06g0588800","Transcript","highly similar to ( 601) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 458) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase_Tyr S_TKc S_TKc Pkinase TyrKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Srm_Brk PTKc_Trk PTKc_InsR_like PTKc_Met_Ron PTKc_Src_like PTKc_Tec_like PTKc_Axl_like PTKc_Fes_like PTKc_Syk_like PTKc_EphR PTKc_Frk_like PTKc_Btk_Bmx PTKc_TrkA PTK_Ryk SPS1 PTKc_Chk PTKc_TrkC PTKc_Abl PTKc_FGFR PTK_CCK4 PTKc_c-ros PTKc_Itk PTKc_Csk PTKc_TrkB PTKc_ALK_LTK PTKc_Ror PTKc_Tie1 protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed",-2.0589373,null,"29.2.1.1.1.2.4","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4","Os03g0265400","Transcript","moderately similar to ( 271) AT1G07320 | Symbols: RPL4 | RPL4; poly(U) binding / structural constituent of ribosome | chr1:2249190-2250173 FORWARDmoderately similar to ( 268) RK4_TOBAC 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) rplD Ribosomal_L4 rpl4 RplD protein|ribosomal protein L4, putative, expressed",2.1165917]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os11g0683500","Transcript","highly similar to ( 768) AT3G06510 | Symbols: SFR2 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | chr3:2016450-2019533 FORWARDweakly similar to ( 114) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) BglB Glyco_hydro_1 PRK09852 celA protein|Os11bglu36 SFR2 homologue, expressed",3.5710804,{"$nulls":8},"29.2.1.1.1.2.5","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5","Os03g0125000","Transcript","moderately similar to ( 283) AT4G01310 | Symbols: | ribosomal protein L5 family protein | chr4:544166-545480 REVERSEmoderately similar to ( 455) RK5_ORYSA 50S ribosomal protein L5, chloroplast precursor - Oryza sativa (Rice) rplE rpl5 RplE rpl5p Ribosomal_L5_C protein|ribosomal protein L5, putative, expressed",2.6563103]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os09g0491100","Transcript","moderately similar to ( 418) AT2G44480 | Symbols: BGLU17 | BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr2:18360476-18363001 FORWARDmoderately similar to ( 332) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed",4.143511,null,30.3,"signalling.calcium","Os01g0279300","Transcript","moderately similar to ( 245) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 243) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam3 - Calmodulin, expressed",-1.3882551,null,"29.2.1.1.1.2.6","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6","Os03g0751400","Transcript","moderately similar to ( 308) AT1G05190 | Symbols: emb2394 | emb2394 (embryo defective 2394); structural constituent of ribosome | chr1:1502515-1503738 REVERSEvery weakly similar to (93.2) RM06_PROWI Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii rplF rpl6 RplF protein|ribosomal protein L6, putative, expressed",2.9028213]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os11g0184300","Transcript","weakly similar to ( 181) AT5G24550 | Symbols: BGLU32 | BGLU32 (BETA GLUCOSIDASE 32); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:8392059-8395302 REVERSEweakly similar to ( 146) BGLC_MAIZE Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) Glyco_hydro_1 BglB celA PRK09852 arb protein|Os11bglu37 - GH1 pseudogene, expressed",2.6101954,null,30.3,"signalling.calcium","Os01g0955500","Transcript","very weakly similar to (85.5) AT3G50770 | Symbols: | calmodulin-related protein, putative | chr3:18873987-18874604 FORWARD protein|OsCML19 - Calmodulin-related calcium sensor protein, expressed",-1.8308636,null,"29.2.1.1.1.2.6","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6","Os03g0356300","Transcript","moderately similar to ( 300) AT1G05190 | Symbols: emb2394 | emb2394 (embryo defective 2394); structural constituent of ribosome | chr1:1502515-1503738 REVERSEvery weakly similar to (92.8) RM06_PROWI Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii rplF rpl6 RplF protein|ribosomal protein L6, putative, expressed",2.9967391]
[null,26.3,"misc.gluco-, galacto- and mannosidases","Os04g0477500","Transcript","highly similar to ( 553) AT3G27540 | Symbols: | glycosyl transferase family 17 protein | chr3:10205489-10206888 FORWARDGlyco_transf_17 protein|glycosyl transferase family 17 protein, putative, expressed",1.3472666,null,30.3,"signalling.calcium","Os01g0896200","Transcript","weakly similar to ( 140) AT3G59690 | Symbols: IQD13 | IQD13 (IQ-domain 13); calmodulin binding | chr3:22049572-22051479 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",3.0610015,null,"29.2.1.1.1.2.9","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9","Os02g0822600","Transcript","weakly similar to ( 191) AT3G44890 | Symbols: RPL9 | RPL9 (RIBOSOMAL PROTEIN L9); structural constituent of ribosome | chr3:16386505-16387963 FORWARDmoderately similar to ( 248) RK9_WHEAT 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) rplI RplI Ribosomal_L9_C protein|ribosomal L9, putative, expressed",1.7699264]
[null,"26.3.1","misc.gluco-, galacto- and mannosidases.alpha-galactosidase","Os01g0130400","Transcript","nearly identical (1269) AT1G68560 | Symbols: ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase | chr1:25734435-25737897 REVERSEhighly similar to ( 802) AGLU_SPIOL Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Spinacia oleracea (Spinach) Glyco_hydro_31 COG1501 PRK10658 PRK10426 protein|glycosyl hydrolase, family 31, putative, expressed",1.744208,null,30.3,"signalling.calcium","Os08g0300200","Transcript","highly similar to ( 598) AT1G05500 | Symbols: SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1 | NTMC2T2.1 | chr1:1625098-1628940 FORWARD COG5038 C2 C2 C2_1 C2 protein|expressed protein",1.4960216,null,"29.2.1.1.1.2.10","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10","Os03g0284400","Transcript","moderately similar to ( 258) AT5G13510 | Symbols: | ribosomal protein L10 family protein | chr5:4341294-4341956 FORWARDmoderately similar to ( 265) RK10_TOBAC 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco)rplJ RplJ protein|ribosomal protein L10, putative, expressed",2.17638]
[null,"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os06g0573600","Transcript","highly similar to ( 949) AT3G13750 | Symbols: BGAL1 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding | chr3:4511192-4515756 FORWARDnearly identical (1036) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 LacA protein|beta-galactosidase precursor, putative, expressed",3.277757,null,30.3,"signalling.calcium","Os03g0130500","Transcript","moderately similar to ( 395) AT1G20760 | Symbols: | calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD EH EH protein|EF hand family protein, putative, expressed",-1.0064472,null,"29.2.1.1.1.2.11","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11","Os03g0122200","Transcript","moderately similar to ( 219) AT1G32990 | Symbols: PRPL11 | PRPL11 (PLASTID RIBOSOMAL PROTEIN L11); structural constituent of ribosome | chr1:11955827-11957139 FORWARDmoderately similar to ( 214) RK11_SPIOL 50S ribosomal protein L11, chloroplast precursor (CL11) - Spinacia oleracea (Spinach) rplK RplK rpl11 RL11 Ribosomal_L11 rpl11p Ribosomal_L11 protein|L11 domain containing ribosomal protein, putative, expressed",2.5056727]
[null,"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os09g0539200","Transcript","highly similar to ( 835) AT2G16730 | Symbols: BGAL13 | BGAL13; beta-galactosidase | chr2:7261986-7266105 REVERSEhighly similar to ( 634) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 Gal_Lectin LacA protein|beta-galactosidase precursor, putative, expressed",-1.1824306,null,30.3,"signalling.calcium","Os02g0158100","Transcript","highly similar to ( 872) AT3G20290 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding | chr3:7075057-7078655 REVERSE Dynamin_N protein|EH domain-containing protein 1, putative, expressed",2.9534626,null,"29.2.1.1.1.2.13","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13","Os01g0749200","Transcript","moderately similar to ( 272) AT1G78630 | Symbols: emb1473 | emb1473 (embryo defective 1473); structural constituent of ribosome | chr1:29575997-29577406 FORWARDmoderately similar to ( 265) RK13_SPIOL 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) rplM Ribosomal_L13 RplM Ribosomal_L13 protein|ribosomal protein L13, putative, expressed",2.2505827]
[null,"26.3.2","misc.gluco-, galacto- and mannosidases.beta-galactosidase","Os01g0875500","Transcript","highly similar to ( 946) AT5G63810 | Symbols: BGAL10 | BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding | chr5:25537242-25541315 FORWARDhighly similar to ( 833) BGAL_ASPOF Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) Glyco_hydro_35 Gal_Lectin LacA protein|beta-galactosidase precursor, putative, expressed",3.2286427,null,30.3,"signalling.calcium","Os01g0194200","Transcript","weakly similar to ( 197) AT2G26180 | Symbols: IQD6 | IQD6 (IQ-domain 6); calmodulin binding | chr2:11143433-11144982 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.2940699,null,"29.2.1.1.1.2.15","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15","Os03g0219900","Transcript","moderately similar to ( 239) AT3G25920 | Symbols: RPL15 | RPL15; structural constituent of ribosome | chr3:9491268-9492558 REVERSEmoderately similar to ( 246) RK15_PEA 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) rplO Ribosomal_L15 RplO protein|50S ribosomal protein L15, chloroplast precursor, putative, expressed",1.8858652]
[null,"26.3.3","misc.gluco-, galacto- and mannosidases.alpha-mannosidase","Os11g0525600","Transcript","nearly identical (1367) AT5G13980 | Symbols: | glycosyl hydrolase family 38 protein | chr5:4508626-4513928 FORWARD Glyco_hydro_38 Glyco_hydro_38C Alpha-mann_mid protein|lysosomal alpha-mannosidase precursor, putative, expressed",2.0368564,null,30.3,"signalling.calcium","Os02g0247800","Transcript","highly similar to ( 508) AT1G53210 | Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD protein|calcium-binding EF hand family protein, putative, expressed",-1.1376272,null,"29.2.1.1.1.2.17","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17","Os03g0815400","Transcript","moderately similar to ( 235) AT3G54210 | Symbols: | ribosomal protein L17 family protein | chr3:20067672-20068385 REVERSEmoderately similar to ( 224) RK17_TOBAC 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) rplQ RplQ Ribosomal_L17 protein|50S ribosomal protein L17, putative, expressed",2.0880232]
[null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os02g0733300","Transcript","highly similar to ( 702) AT1G70710 | Symbols: ATGH9B1, CEL1 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:26659356-26662962 REVERSEhighly similar to ( 925) GUN6_ORYSA Endoglucanase 6 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",1.841709,null,30.3,"signalling.calcium","Os03g0808600","Transcript","highly similar to ( 691) AT5G12480 | Symbols: CPK7 | CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:4047817-4050035 REVERSEmoderately similar to ( 478) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc FRQ1 protein|CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-0.9945205,null,"29.2.1.1.1.2.18","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18","Os03g0828100","Transcript","weakly similar to ( 174) AT1G48350 | Symbols: | ribosomal protein L18 family protein | chr1:17867269-17868215 FORWARDmoderately similar to ( 233) RK18_ORYSA 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice)rplR rpl18 RplR Ribosomal_L18p protein|ribosomal L18p/L5e family protein, putative, expressed",3.0872662]
[null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os05g0129200","Transcript","moderately similar to ( 451) AT2G44540 | Symbols: AtGH9B9 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr2:18386341-18388110 REVERSEhighly similar to ( 936) GUN14_ORYSA Endoglucanase 14 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 14) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.024666,null,30.3,"signalling.calcium","Os10g0539600","Transcript","highly similar to ( 721) AT2G17290 | Symbols: CPK6, ATCDPK3 | CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr2:7517005-7519239 FORWARDnearly identical (1090) CDPK1_ORYSA Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 FRQ1 protein|CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.3820488,null,"29.2.1.1.1.2.19","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19","Os02g0652600","Transcript","weakly similar to ( 138) AT4G17560 | Symbols: | ribosomal protein L19 family protein | chr4:9780343-9781752 FORWARDweakly similar to ( 142) RK19_SPIOL 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) rpl19 rplS RplS Ribosomal_L19 protein|50S ribosomal protein L19, chloroplast precursor, putative, expressed",3.607076]
[null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os03g0329500","Transcript","highly similar to ( 775) AT5G49720 | Symbols: ATGH9A1, DEC, KOR, RSW2, IRX2, KOR1 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:20197765-20200168 REVERSEnearly identical (1057) GUN9_ORYSA Endoglucanase 9 (EC 3.2.1.4) (Endo-1,4-beta glucanase 9) (OsGLU1) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.7066774,null,30.3,"signalling.calcium","Os10g0471400","Transcript","highly similar to ( 655) AT4G28600 | Symbols: NPGR2 | NPGR2 (no pollen germination related 2); calmodulin binding | chr4:14130046-14132599 FORWARD protein|tetratricopeptide repeat domain containing protein, expressed",2.6239593,null,"29.2.1.1.1.2.21","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21","Os02g0259600","Transcript","weakly similar to ( 147) AT1G35680 | Symbols: | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | chr1:13208777-13210246 FORWARDweakly similar to ( 145) RK21_SPIOL 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) Ribosomal_L21p rplU RplU rpl21 protein|50S ribosomal protein L21, chloroplast precursor, putative, expressed",3.1183121]
[null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os03g0736300","Transcript","highly similar to ( 689) AT5G49720 | Symbols: ATGH9A1, DEC, KOR, RSW2, IRX2, KOR1 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:20197765-20200168 REVERSEhighly similar to ( 943) GUN10_ORYSA Endoglucanase 10 (EC 3.2.1.4) (Endo-1,4-beta glucanase 10) (OsGLU2) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",2.595525,null,30.3,"signalling.calcium","Os01g0833800","Transcript","weakly similar to ( 150) AT5G03040 | Symbols: iqd2 | iqd2 (IQ-domain 2); calmodulin binding | chr5:710380-712406 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",-0.994442,null,"29.2.1.1.1.2.24","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24","Os06g0683200","Transcript","weakly similar to ( 199) AT5G54600 | Symbols: | 50S ribosomal protein L24, chloroplast (CL24) | chr5:22183046-22184403 FORWARDmoderately similar to ( 213) RK24_TOBAC 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) rplX RplX rpl24 protein|ribosomal protein L24, putative, expressed",2.028394]
[null,"26.3.4","misc.gluco-, galacto- and mannosidases.endoglucanase","Os09g0533900","Transcript","highly similar to ( 604) AT1G75680 | Symbols: AtGH9B7 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | chr1:28417215-28419231 REVERSEhighly similar to ( 929) GUN24_ORYSA Endoglucanase 24 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 24) - Oryza sativa (Rice)Glyco_hydro_9 protein|endoglucanase, putative, expressed",1.8041593,null,30.3,"signalling.calcium","Os05g0105600","Transcript","moderately similar to ( 249) AT1G79270 | Symbols: ECT8 | ECT8 (evolutionarily conserved C-terminal region 8) | chr1:29816157-29818811 FORWARD YTH protein|ECT protein, putative, expressed",1.3894128,null,"29.2.1.1.1.2.28","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28","Os05g0101400","Transcript","weakly similar to ( 137) AT2G33450 | Symbols: | 50S ribosomal protein L28, chloroplast (CL28) | chr2:14173620-14174380 FORWARDweakly similar to ( 130) RK28_TOBAC 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco)rpmB protein|ribosomal protein L28 protein, putative, expressed",1.7980641]
[null,26.4,"misc.beta 1,3 glucan hydrolases","Os03g0421800","Transcript","very weakly similar to (97.8) AT1G18650 | Symbols: PDCB3 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | chr1:6419036-6420413 REVERSEX8 protein|X8 domain containing protein, expressed",2.3464868,null,30.3,"signalling.calcium","Os01g0716200","Transcript","weakly similar to ( 186) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",3.9512074,null,"29.2.1.1.1.2.29","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29","Os02g0754300","Transcript","weakly similar to ( 109) AT5G65220 | Symbols: | ribosomal protein L29 family protein | chr5:26061301-26062506 FORWARDweakly similar to ( 136) RK29_MAIZE 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) protein|ribosomal protein L29, putative, expressed",1.8062941]
[null,26.4,"misc.beta 1,3 glucan hydrolases","Os06g0537700","Transcript","weakly similar to ( 108) AT3G58100 | Symbols: PDCB5 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding | chr3:21515397-21516329 REVERSEX8 protein|X8 domain containing protein, expressed",1.0249586,null,30.3,"signalling.calcium","Os12g0619000","Transcript","weakly similar to ( 165) AT3G22190 | Symbols: IQD5 | IQD5 (IQ-domain 5); calmodulin binding | chr3:7831280-7833512 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.3225497,null,"29.2.1.1.2.1.27","protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S27","Os05g0148300","Transcript","weakly similar to ( 101) AT5G44710 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 56 Blast hits to 56 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 30; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr5:18041621-18042322 FORWARD Mit_rib_S27 protein|expressed protein",-1.0530885]
[null,26.4,"misc.beta 1,3 glucan hydrolases","Os01g0243700","Transcript","weakly similar to ( 110) AT1G78520 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 17 (TAIR:AT2G43670.1); Has 747 Blast hits to 711 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 747; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:29537976-29538656 REVERSEvery weakly similar to (93.6) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)X8 protein|X8 domain containing protein, expressed",1.2619548,null,30.3,"signalling.calcium","Os07g0170300","Transcript","moderately similar to ( 300) AT5G61020 | Symbols: ECT3 | ECT3 | chr5:24557485-24559780 REVERSE YTH protein|YT521-B, putative, expressed",-1.0645069,null,"29.2.1.1.2.2.37","protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L37","Os12g0244200","Transcript","weakly similar to ( 122) AT3G01740 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14290.1); Has 117 Blast hits to 117 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 22; Plants - 27; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr3:268118-268498 FORWARD Ribosomal_L37 protein|expressed protein",-1.104826]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0739700","Transcript","highly similar to ( 625) AT5G56590 | Symbols: | glycosyl hydrolase family 17 protein | chr5:22907521-22909436 FORWARDmoderately similar to ( 297) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",-1.0579394,null,30.3,"signalling.calcium","Os03g0748000","Transcript","moderately similar to ( 389) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.1706415,null,"29.2.1.1.3.1.1","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1","Os03g0315800","Transcript","moderately similar to ( 492) AT5G30510 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome | chr5:11619262-11621223 REVERSEhighly similar to ( 511) RR1_SPIOL 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach)PRK07400 RpsA rpsA PRK00087 rpsA rpsA S1 protein|S1 RNA binding domain containing protein, expressed",2.555285]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os02g0532900","Transcript","moderately similar to ( 423) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 235) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",2.0345922,null,30.3,"signalling.calcium","Os01g0950700","Transcript","very weakly similar to (97.1) AT2G38800 | Symbols: | calmodulin-binding protein-related | chr2:16216999-16218837 FORWARDCaM_binding protein|expressed protein",-2.1979692,null,"29.2.1.1.3.1.6","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6","Os12g0563200","Transcript","moderately similar to ( 238) AT3G17170 | Symbols: RFC3 | RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome | chr3:5853186-5854853 REVERSErpsF RpsF protein|ribosomal protein S6, putative, expressed",1.1762419]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os07g0539100","Transcript","moderately similar to ( 344) AT5G55180 | Symbols: | glycosyl hydrolase family 17 protein | chr5:22388834-22390561 FORWARDmoderately similar to ( 218) E13D_HORVU Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) - Hordeum vulgare (Barley)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",1.6647385,null,30.3,"signalling.calcium","Os03g0158500","Transcript","moderately similar to ( 359) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.2037576,null,"29.2.1.1.3.2.20","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20","Os05g0528200","Transcript","weakly similar to ( 184) AT1G16740 | Symbols: | ribosomal protein L20 family protein | chr1:5727773-5728950 FORWARDvery weakly similar to (89.0) RK20_CHLVU Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) rplT RplT rpl20 Ribosomal_L20 protein|50S ribosomal protein L20, putative, expressed",-1.2454724]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0860800","Transcript","moderately similar to ( 442) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 240) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",-1.2594973,null,30.3,"signalling.calcium","Os04g0402100","Transcript","highly similar to ( 566) AT5G61790 | Symbols: CNX1, ATCNX1 | calnexin 1 (CNX1) | chr5:24827394-24829642 REVERSEhighly similar to ( 574) CALX_SOYBN Calnexin homolog precursor - Glycine max (Soybean) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.3851147,null,"29.2.1.1.3.2.35","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35","Os06g0647100","Transcript","weakly similar to ( 107) AT2G24090 | Symbols: | ribosomal protein L35 family protein | chr2:10242038-10243416 FORWARDweakly similar to ( 107) RK35_SPIOL 50S ribosomal protein L35, chloroplast precursor (CL35) - Spinacia oleracea (Spinach) protein|ribosomal protein L35, putative, expressed",2.7081072]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os07g0510200","Transcript","moderately similar to ( 426) AT2G01630 | Symbols: | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative | chr2:279564-281955 REVERSEweakly similar to ( 169) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 X8 protein|glucan endo-1,3-beta-glucosidase precursor, putative, expressed",1.8603745,null,30.3,"signalling.calcium","Os12g0556200","Transcript","moderately similar to ( 210) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-1.329944,null,"29.2.1.1.3.2.510","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A","Os02g0321900","Transcript","weakly similar to ( 196) AT1G08360 | Symbols: | 60S ribosomal protein L10A (RPL10aA) | chr1:2636231-2637694 FORWARDweakly similar to ( 154) RL10A_CHLRE 60S ribosomal protein L10a - Chlamydomonas reinhardtii Ribosomal_L1 RplA rpl1P protein|L1P family of ribosomal proteins domain containing protein, expressed",-0.96208924]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os04g0412300","Transcript","moderately similar to ( 438) AT2G27500 | Symbols: | glycosyl hydrolase family 17 protein | chr2:11752364-11753514 REVERSEmoderately similar to ( 253) E13B_WHEAT Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",-1.3519093,null,30.3,"signalling.calcium","Os07g0568600","Transcript","highly similar to ( 805) AT5G19450 | Symbols: CDPK19, CPK8 | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:6558672-6561471 REVERSEhighly similar to ( 516) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc FRQ1 protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.2445259,null,"29.2.1.1.3.2.1185","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18/L5","Os09g0549700","Transcript","weakly similar to ( 147) AT3G45020 | Symbols: | 50S ribosomal protein-related | chr3:16469167-16469568 REVERSE protein|ribosomal L18p/L5e family protein, putative, expressed",-1.0638255]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os01g0946600","Transcript","moderately similar to ( 285) AT4G16260 | Symbols: | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:9200180-9201441 REVERSEmoderately similar to ( 422) E13E_HORVU Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) - Hordeum vulgare (Barley)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",3.953078,null,30.3,"signalling.calcium","Os05g0197300","Transcript","moderately similar to ( 401) AT2G26190 | Symbols: | calmodulin-binding family protein | chr2:11147901-11150082 REVERSE protein|calmodulin-binding protein, putative, expressed",-1.891696,null,"29.2.1.2.1.4","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4","Os02g0105900","Transcript","moderately similar to ( 434) AT5G58420 | Symbols: | 40S ribosomal protein S4 (RPS4D) | chr5:23619599-23620896 FORWARDmoderately similar to ( 467) RS4_ORYSA 40S ribosomal protein S4 (SCAR protein SS620) - Oryza sativa (Rice) RPS4A PRK04313 Ribosomal_S4e protein|40S ribosomal protein S4, putative, expressed",-1.1409374]
[null,"26.4.1","misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase","Os05g0375400","Transcript","moderately similar to ( 264) AT4G16260 | Symbols: | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr4:9200180-9201441 REVERSEmoderately similar to ( 435) GUB2_HORVU Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II) (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) - Hordeum vulgare (Barley)Glyco_hydro_17 protein|glycosyl hydrolases family 17, putative, expressed",3.1620057,null,30.3,"signalling.calcium","Os03g0807400","Transcript","highly similar to ( 612) AT1G19720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:6819926-6822610 REVERSEmoderately similar to ( 325) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin family protein, expressed",1.2865318,null,"29.2.1.2.1.10","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10","Os04g0430100","Transcript","weakly similar to ( 164) AT5G52650 | Symbols: | 40S ribosomal protein S10 (RPS10C) | chr5:21355781-21357003 REVERSEweakly similar to ( 194) RS10_ORYSA 40S ribosomal protein S10 - Oryza sativa (Rice) S10_plectin COG5045 protein|40S ribosomal protein S10, putative, expressed",-1.0569]
[null,26.6,"misc.O-methyl transferases","Os03g0775000","Transcript","moderately similar to ( 313) AT5G42760 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), O-methyltransferase, N-terminal (InterPro:IPR003455); Has 888 Blast hits to 888 proteins in 139 species: Archae - 36; Bacteria - 741; Metazoa - 23; Fungi - 3; Plants - 27; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr5:17148953-17150105 FORWARDCOG3315 protein|methyltransferase, putative, expressed",3.4512665,null,30.3,"signalling.calcium","Os01g0329800","Transcript","moderately similar to ( 250) AT1G48110 | Symbols: ECT7 | ECT7 (evolutionarily conserved C-terminal region 7) | chr1:17770339-17772806 REVERSE YTH protein|ECT protein, putative, expressed",-0.9762449,null,"29.2.1.2.1.11","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11","Os04g0502300","Transcript","moderately similar to ( 264) AT3G48930 | Symbols: EMB1080 | EMB1080 (embryo defective 1080); structural constituent of ribosome | chr3:18141017-18142189 REVERSEmoderately similar to ( 261) RS11_SOYBN 40S ribosomal protein S11 - Glycine max (Soybean) rps17p Ribosomal_S17 RpsQ protein|ribosomal protein S17, putative, expressed",-1.1222967]
[null,26.6,"misc.O-methyl transferases","Os05g0515600","Transcript","weakly similar to ( 182) AT4G35160 | Symbols: | O-methyltransferase family 2 protein | chr4:16730989-16732808 REVERSEmoderately similar to ( 444) ZRP4_MAIZE O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) - Zea mays (Maize) Methyltransf_2 protein|O-methyltransferase, putative, expressed",5.9088807,null,30.3,"signalling.calcium","Os12g0603800","Transcript","weakly similar to ( 160) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDweakly similar to ( 160) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCML5 - Calmodulin-related calcium sensor protein, expressed",-1.6109797,null,"29.2.1.2.1.20","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20","Os06g0134000","Transcript","weakly similar to ( 179) AT5G62300 | Symbols: | 40S ribosomal protein S20 (RPS20C) | chr5:25021388-25022235 REVERSEmoderately similar to ( 230) RS20_ORYSA 40S ribosomal protein S20 - Oryza sativa (Rice) Ribosomal_S10 RpsJ rps10P protein|S10/S20 domain containing ribosomal protein, putative, expressed",-1.0890528]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os06g0286310","Transcript","moderately similar to ( 297) AT2G22260 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr2:9461342-9463053 FORWARD protein|oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed",1.5338697,null,30.3,"signalling.calcium","Os11g0668300","Transcript","weakly similar to ( 133) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-3.3038952,null,"29.2.1.2.1.515","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A","Os07g0208000","Transcript","moderately similar to ( 249) AT5G59850 | Symbols: | 40S ribosomal protein S15A (RPS15aF) | chr5:24112499-24113084 REVERSEmoderately similar to ( 246) RS15A_BRANA 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) rps8p Ribosomal_S8 RpsH protein|40S ribosomal protein S15a, putative, expressed",-0.9711466]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os12g0226700","Transcript","moderately similar to ( 391) AT3G03080 | Symbols: | NADP-dependent oxidoreductase, putative | chr3:698530-700278 REVERSE COG2130 Qor protein|NADP-dependent oxidoreductase, putative, expressed",-1.2686224,null,30.3,"signalling.calcium","Os08g0115200","Transcript","moderately similar to ( 252) AT4G00820 | Symbols: iqd17 | iqd17 (IQ-domain 17); calmodulin binding | chr4:349300-351307 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",1.5523863,null,"29.2.1.2.2.7","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7","Os08g0542100","Transcript","moderately similar to ( 222) AT1G80750 | Symbols: | 60S ribosomal protein L7 (RPL7A) | chr1:30349052-30350434 FORWARD Ribosomal_L7 protein|60S ribosomal protein L7, putative, expressed",-1.265213]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0269600","Transcript","weakly similar to ( 198) AT4G12290 | Symbols: | amine oxidase/ copper ion binding / quinone binding | chr4:7304434-7306973 FORWARDvery weakly similar to (90.9) AMO_PEA Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) tynA Cu_amine_oxidN3 TynA protein|amine oxidase precursor, putative, expressed",2.4455447,null,30.3,"signalling.calcium","Os04g0569900","Transcript","weakly similar to ( 106) AT4G23060 | Symbols: IQD22 | IQD22 (IQ-domain 22); calmodulin binding | chr4:12087283-12090408 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",2.0508223,null,"29.2.1.2.2.10","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10","Os11g0220800","Transcript","moderately similar to ( 369) AT1G66580 | Symbols: | 60S ribosomal protein L10 (RPL10C) | chr1:24839208-24840439 FORWARDmoderately similar to ( 437) RL101_ORYSA 60S ribosomal protein L10-1 (Putative tumor suppressor SC34) (Protein QM) - Oryza sativa (Rice) rpl10e RplP Ribosomal_L16 protein|ribosomal protein, putative, expressed",-0.9831174]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os07g0112000","Transcript","moderately similar to ( 482) AT5G61290 | Symbols: | flavin-containing monooxygenase family protein / FMO family protein | chr5:24648599-24650647 FORWARD FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",1.3904988,null,30.3,"signalling.calcium","Os01g0955100","Transcript","weakly similar to ( 114) AT1G76650 | Symbols: CML38 | calcium-binding EF hand family protein | chr1:28766909-28767442 REVERSE protein|OsCML31 - Calmodulin-related calcium sensor protein, expressed",-1.1783794,null,"29.2.1.2.2.18","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18","Os07g0674700","Transcript","moderately similar to ( 291) AT5G27850 | Symbols: | 60S ribosomal protein L18 (RPL18C) | chr5:9873169-9874297 FORWARDmoderately similar to ( 269) RL18_CICAR 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) Ribosomal_L18e RPL18A protein|60S ribosomal protein L18-3, putative, expressed",-0.951622]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0359700","Transcript","moderately similar to ( 323) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 321) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",-1.7128247,null,30.3,"signalling.calcium","Os01g0267900","Transcript","moderately similar to ( 248) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 246) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam1-3 - Calmodulin, expressed",-0.9781513,null,"29.2.1.2.2.22","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22","Os07g0674200","Transcript","weakly similar to ( 127) AT3G05560 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) | chr3:1614641-1615204 FORWARD Ribosomal_L22e protein|60S ribosomal protein L22-2, putative, expressed",-1.1605240000000001]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os12g0597400","Transcript","moderately similar to ( 485) AT3G04650 | Symbols: | oxidoreductase | chr3:1262017-1264343 FORWARDCOG3380 protein|FAD dependent oxidoreductase, putative, expressed",1.320716,null,30.3,"signalling.calcium","Os03g0161400","Transcript","weakly similar to ( 140) AT4G14750 | Symbols: IQD19 | IQD19 (IQ-domain 19); calmodulin binding | chr4:8470449-8471903 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",3.2118518,null,"29.2.1.2.2.23","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23","Os03g0139100","Transcript","weakly similar to ( 182) AT3G04400 | Symbols: emb2171 | emb2171 (embryo defective 2171); structural constituent of ribosome | chr3:1167339-1168308 FORWARDweakly similar to ( 183) RL23_TOBAC 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) rpl14p RplN protein|ribosomal protein, putative, expressed",-1.0164894]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os03g0784000","Transcript","moderately similar to ( 373) AT1G56000 | Symbols: | amine oxidase-related | chr1:20944149-20946101 FORWARDCOG3380 protein|amine oxidase-related, putative, expressed",1.9066623,null,30.3,"signalling.calcium","Os05g0535900","Transcript","weakly similar to ( 190) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",1.9528507,null,"29.2.1.2.2.26","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26","Os01g0140500","Transcript","weakly similar to ( 143) AT5G67510 | Symbols: | 60S ribosomal protein L26 (RPL26B) | chr5:26937970-26938410 REVERSEweakly similar to ( 129) RL26_BRARA 60S ribosomal protein L26 - Brassica rapa (Turnip) rpl24p protein|ribosomal protein L24, putative, expressed",-1.0917116]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os07g0510900","Transcript","highly similar to ( 747) AT1G76160 | Symbols: sks5 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase | chr1:28578211-28581020 REVERSEhighly similar to ( 545) ASO_BRANA L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 SufI protein|monocopper oxidase, putative, expressed",2.8992894,null,30.3,"signalling.calcium","Os07g0246200","Transcript","highly similar to ( 512) AT1G09210 | Symbols: | calreticulin 2 (CRT2) | chr1:2973217-2976655 REVERSEhighly similar to ( 603) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.0358893,null,"29.2.1.2.2.30","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30","Os05g0490100","Transcript","weakly similar to ( 159) AT1G77940 | Symbols: | 60S ribosomal protein L30 (RPL30B) | chr1:29304116-29305288 REVERSEweakly similar to ( 185) RL30_MAIZE 60S ribosomal protein L30 - Zea mays (Maize) RPL30 Ribosomal_L7Ae PRK01018 protein|ribosomal protein L7Ae, putative, expressed",-0.9632222]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0224700","Transcript","moderately similar to ( 421) AT5G25620 | Symbols: YUC6 | YUC6 (YUCCA6); FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | chr5:8935520-8938224 REVERSE TrkA FMO-like protein|flavin monooxygenase, putative, expressed",-3.0126324,{"$nulls":8},"29.2.1.2.2.32","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32","Os09g0501200","Transcript","weakly similar to ( 196) AT4G18100 | Symbols: | 60S ribosomal protein L32 (RPL32A) | chr4:10035715-10036475 REVERSE Ribosomal_L32e RPL32 rpl32e protein|60S ribosomal protein L32, putative, expressed",-1.2014208]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0100400","Transcript","highly similar to ( 706) AT4G12420 | Symbols: SKU5 | SKU5; copper ion binding / oxidoreductase | chr4:7349941-7352868 REVERSEmoderately similar to ( 438) ASO_BRANA L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) Cu-oxidase_3 Cu-oxidase Cu-oxidase_2 SufI protein|monocopper oxidase, putative, expressed",1.2615339,null,30.5,"signalling.G-proteins","Os06g0195900","Transcript","highly similar to ( 894) AT1G50920 | Symbols: | GTP-binding protein-related | chr1:18870555-18872570 FORWARD COG1084 NOG Obg_like NOGCT NOG1 protein|nucleolar GTP-binding protein 1, putative, expressed",-1.0359007,null,"29.2.1.2.2.57","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A","Os01g0924800","Transcript","moderately similar to ( 306) AT2G47610 | Symbols: | 60S ribosomal protein L7A (RPL7aA) | chr2:19529854-19531401 FORWARDmoderately similar to ( 329) RL7A_ORYSA 60S ribosomal protein L7a - Oryza sativa (Rice) Ribosomal_L7Ae protein|ribosomal protein L7Ae, putative, expressed",-1.0217015]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0372700","Transcript","moderately similar to ( 352) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 334) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",-1.1529967,null,30.5,"signalling.G-proteins","Os04g0620700","Transcript","weakly similar to ( 138) AT1G48920 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid binding / nucleotide binding | chr1:18098186-18101422 FORWARD protein|nucleolin, putative, expressed",-1.1026945,null,"29.2.1.2.2.81","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1","Os08g0116500","Transcript","very weakly similar to (91.3) AT5G24510 | Symbols: | 60s acidic ribosomal protein P1, putative | chr5:8369295-8369866 REVERSEvery weakly similar to (97.4) RLA1_MAIZE 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) protein|60S acidic ribosomal protein, putative, expressed",-1.0052239]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os09g0503100","Transcript","moderately similar to ( 321) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 315) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",2.622944,null,30.5,"signalling.G-proteins","Os05g0564400","Transcript","moderately similar to ( 370) AT5G60860 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding | chr5:24484750-24485565 FORWARDmoderately similar to ( 356) RB11B_TOBAC Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab5_related Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab4 Rab14 Rab19 Rab18 Rab6 Rab39 Rab35 Rab30 Rab26 RabA_like Rab32_Rab38 Rab7 Rab21 Rab3 Rab15 Ras_like_GTPase Rab27A Ras Rab40 Rab33B_Rab33A Rab12 Rab9 COG1100 RAS Rab23_lke RJL Ras2 Rab24 Ran Rab28 M_R_Ras_like RabL2 Rap_like Rho RalA_RalB RheB RHO Rab36_Rab34 H_N_K_Ras_like Rho4_like Rap2 Rap1 RERG_RasL11_like ARHI_like RSR1 RAN RabL4 Wrch_1 Spg1 Rab20 Rho3 Rit_Rin_Ric RGK Rac1_like RhoA_like protein|ras-related protein, putative, expressed",-1.0946509,null,"29.2.1.2.2.510","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A","Os02g0321900","Transcript","weakly similar to ( 196) AT1G08360 | Symbols: | 60S ribosomal protein L10A (RPL10aA) | chr1:2636231-2637694 FORWARDweakly similar to ( 154) RL10A_CHLRE 60S ribosomal protein L10a - Chlamydomonas reinhardtii Ribosomal_L1 RplA rpl1P protein|L1P family of ribosomal proteins domain containing protein, expressed",-0.96208924]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0671200","Transcript","highly similar to ( 600) AT2G43020 | Symbols: ATPAO2 | ATPAO2 (Polyamine oxidase 2); amine oxidase/ electron carrier/ oxidoreductase | chr2:17891945-17894440 FORWARDweakly similar to ( 141) PAO_MAIZE Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) Amino_oxidase COG1231 HemY PRK11883 COG1233 protein|amine oxidase, flavin-containing, domain containing protein, expressed",-1.2848374,null,30.5,"signalling.G-proteins","Os11g0638000","Transcript","moderately similar to ( 463) AT3G12080 | Symbols: emb2738 | emb2738 (embryo defective 2738); GTP binding | chr3:3847851-3851677 FORWARD engA COG1160 EngA2 engA PRK09518 trmE ThdF Era trmE MMR_HSR1 Era_like EngA1 era Era protein|GTP-binding protein, putative, expressed",1.5003601,null,"29.2.1.2.2.518","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A","Os01g0752300","Transcript","moderately similar to ( 310) AT1G29970 | Symbols: | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1) | chr1:10499952-10501311 REVERSEmoderately similar to ( 334) RL18A_ORYSA 60S ribosomal protein L18a - Oryza sativa (Rice) Ribosomal_L18ae protein|60S ribosomal protein L18a, putative, expressed",-0.9993324]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0368000","Transcript","moderately similar to ( 353) AT5G61290 | Symbols: | flavin-containing monooxygenase family protein / FMO family protein | chr5:24648599-24650647 FORWARD FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",2.6936905,null,30.5,"signalling.G-proteins","Os03g0246800","Transcript","nearly identical (2221) AT3G60860 | Symbols: | guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD COG5307 Sec7 Sec7 Sec7 DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.0353475,null,"29.2.1.2.2.523","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A","Os04g0501000","Transcript","weakly similar to ( 144) AT3G55280 | Symbols: RPL23AB | RPL23AB (RIBOSOMAL PROTEIN L23AB); RNA binding / nucleotide binding / structural constituent of ribosome | chr3:20500667-20501519 FORWARDweakly similar to ( 153) RL23A_TOBAC 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) protein|60S ribosomal protein L23A, putative, expressed",-1.032732]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os06g0203200","Transcript","moderately similar to ( 289) AT1G19250 | Symbols: FMO1 | FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); FAD binding / NADP or NADPH binding / electron carrier/ flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | chr1:6650656-6653053 REVERSE FMO-like TrkA protein|flavin-containing monooxygenase family protein, putative, expressed",2.4872782,null,30.5,"signalling.G-proteins","Os01g0229400","Transcript","weakly similar to ( 144) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 223) RAC1_ORYSA Rac-like GTP-binding protein 1 (OsRac1) - Oryza sativa (Rice) Rop_like RHO Rho Rho4_like Rac1_like protein|ras-related protein, putative, expressed",2.7913215,null,"29.2.1.2.2.535","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A","Os05g0556900","Transcript","weakly similar to ( 171) AT1G41880 | Symbols: | 60S ribosomal protein L35a (RPL35aB) | chr1:15651585-15652427 REVERSE Ribosomal_L35Ae COG2451 protein|60S ribosomal protein L35a-3, putative, expressed",-1.0675901]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os01g0687800","Transcript","highly similar to ( 588) AT5G11540 | Symbols: | FAD-binding domain-containing protein | chr5:3703002-3704981 REVERSE GlcD protein|FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed",1.5865997,null,30.5,"signalling.G-proteins","Os07g0408500","Transcript","moderately similar to ( 375) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_ARHGAP22_24_25 RhoGAP_fBEM3 RhoGAP_ARHGAP20 RhoGap_RalBP1 protein|rhoGAP domain containing protein, expressed",1.7848724,null,"29.2.1.2.2.537","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A","Os01g0679700","Transcript","weakly similar to ( 114) AT3G10950 | Symbols: | 60S ribosomal protein L37a (RPL37aB) | chr3:3423893-3424566 FORWARDweakly similar to ( 119) RL37A_ORYSA 60S ribosomal protein L37a - Oryza sativa (Rice) Ribosomal_L37ae protein|60S ribosomal protein L37a, putative, expressed",-0.95343685]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os10g0413500","Transcript","moderately similar to ( 408) AT3G28480 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr3:10676266-10678262 REVERSE P4Hc protein|oxidoreductase, putative, expressed",-1.124023,null,30.5,"signalling.G-proteins","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623,null,"29.2.1.2.2.537","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A","Os05g0557000","Transcript","very weakly similar to (83.2) RL37A_ORYSA 60S ribosomal protein L37a - Oryza sativa (Rice) protein|60S ribosomal protein L37a, putative, expressed",-0.94864494]
[null,26.7,"misc.oxidases - copper, flavone etc.","Os04g0359100","Transcript","moderately similar to ( 317) AT4G13010 | Symbols: | oxidoreductase, zinc-binding dehydrogenase family protein | chr4:7600682-7602567 FORWARDmoderately similar to ( 308) QORH_SPIOL Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) Qor AdhP COG2130 protein|dehydrogenase, putative, expressed",4.969017,null,30.5,"signalling.G-proteins","Os07g0408100","Transcript","moderately similar to ( 326) AT3G49180 | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3); nucleotide binding | chr3:18229810-18231874 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.52917,null,"29.2.1.99.1.4","protein.synthesis.ribosomal protein.unknown.small subunit.S4","Os04g0662100","Transcript","weakly similar to ( 137) AT5G15750 | Symbols: | RNA-binding S4 domain-containing protein | chr5:5141449-5142701 FORWARD protein|S4 domain containing protein, putative, expressed",-1.0731497]
[null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os02g0635000","Transcript","moderately similar to ( 362) AT5G22300 | Symbols: NIT4 | NIT4 (NITRILASE 4); 3-cyanoalanine hydratase/ cyanoalanine nitrilase/ indole-3-acetonitrile nitrilase/ nitrilase/ nitrile hydratase | chr5:7379401-7381764 FORWARDmoderately similar to ( 379) NRL4_TOBAC Nitrilase 4 (EC 3.5.5.1) - Nicotiana tabacum (Common tobacco) CN_hydrolase COG0388 protein|nitrilase, putative, expressed",1.2736211,null,30.5,"signalling.G-proteins","Os01g0540300","Transcript","weakly similar to ( 146) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDweakly similar to ( 167) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Tc10 Rho4_like protein|Ras family domain containing protein, expressed",2.1408327,null,"29.2.1.99.1.21","protein.synthesis.ribosomal protein.unknown.small subunit.S21","Os02g0189000","Transcript","protein|ribosome, putative, expressed",1.8019034]
[null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os03g0175600","Transcript","moderately similar to ( 472) AT5G12040 | Symbols: | carbon-nitrogen hydrolase family protein | chr5:3885162-3887772 FORWARD COG0388 CN_hydrolase protein|nitrilase, putative, expressed",1.0514646,null,30.5,"signalling.G-proteins","Os02g0632500","Transcript","highly similar to ( 781) AT1G60860 | Symbols: AGD2 | AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding | chr1:22401244-22407639 REVERSE ArfGap ArfGap BAR COG5347 PH_centaurin protein|ARF GTPase-activating domain-containing protein, putative, expressed",-1.0146769,null,"29.2.1.99.2.34","protein.synthesis.ribosomal protein.unknown.large subunit.L34","Os01g0805000","Transcript","protein|50S ribosomal protein, putative, expressed",2.2659514]
[null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os11g0438700","Transcript","moderately similar to ( 265) AT5G06060 | Symbols: | tropinone reductase, putative / tropine dehydrogenase, putative | chr5:1824066-1825833 REVERSEweakly similar to ( 106) FABG4_BRANA 3-oxoacyl-[acyl-carrier-protein] reductase 4 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 4) (Fragment) - Brassica napus (Rape) fabG PRK09242 fabG PRK12826 fabG PRK12829 PRK08213 FabG fabG PRK07479 PRK12939 PRK06124 PRK12827 PRK12429 PRK06484 PRK06935 fabG PRK07814 PRK08936 PRK06138 PRK12824 PRK07523 PRK06500 PRK07856 fabG PRK08643 PRK07576 PRK09135 fabG PRK06841 PRK07063 PRK08324 PRK08265 PRK07097 PRK06113 PRK08277 fabG PRK07677 fabG PRK06346 PRK08220 PRK06114 PRK12828 COG4221 PRK07060 PRK06172 PRK06523 PRK07069 fabG PRK08589 DltE PRK08063 PRK08993 PRK07035 PRK07633 PRK07062 PRK12745 PRK06057 PRK07326 PRK12481 PRK06122 PRK06949 PRK07067 PRK06198 PRK05867 PRK08226 PRK07478 PRK12743 fabG fabG PRK12937 PRK12747 PRK06398 PRK06171 PRK07774 PRK08085 PRK12935 PRK06701 fabG PRK07577 PRK07454 fabG PRK07074 PRK12748 PRK07890 PRK08628 PRK06200 PRK12746 fabG PRK12936 benD PRK06125 PRK05875 PRK09186 PRK06128 PRK08339 PRK07831 PRK08267 PRK07201 PRK09072 PRK12428 PRK07109 DltE PRK06123 adh_short PRK08945 PRK07825 PRK06181 PRK09134 PRK08278 FabI PRK05866 PRK12742 PRK09730 PRK05855 PRK08263 PRK07985 PRK05872 PRK08219 PRK12744 PRK06947 PRK06179 PRK06940 PRK08264 PRK12938 fabG PRK05650 PRK07041 PRK06483 PRK08416 fabG PRK07791 PRK12384 protein|tropinone reductase 2, putative, expressed",-1.3608128,null,30.5,"signalling.G-proteins","Os05g0390100","Transcript","highly similar to ( 691) AT1G03160 | Symbols: FZL | FZL (FZO-LIKE); GTP binding / GTPase/ thiamin-phosphate diphosphorylase | chr1:761321-765091 FORWARD Dynamin_N Era_like protein|FZL, putative, expressed",2.6471267,null,"29.2.1.99.99","protein.synthesis.ribosomal protein.unknown.unknown","Os03g0739700","Transcript","weakly similar to ( 121) AT4G19390 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553 proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). | chr4:10574903-10576355 REVERSEUPF0114 protein|uncharacterized UPF0114 domain containing protein, expressed",-2.0760953]
[null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os11g0438000","Transcript","weakly similar to ( 107) AT1G07440 | Symbols: | tropinone reductase, putative / tropine dehydrogenase, putative | chr1:2286700-2287665 REVERSE protein|tropinone reductase, putative, expressed",2.4885027,null,30.5,"signalling.G-proteins","Os03g0796800","Transcript","highly similar to ( 561) AT2G38840 | Symbols: | guanylate-binding family protein | chr2:16227329-16232115 FORWARD protein|GTP binding protein, putative, expressed",-0.97959137,null,"29.2.1.99.99","protein.synthesis.ribosomal protein.unknown.unknown","Os07g0656600","Transcript","moderately similar to ( 288) AT5G13720 | Symbols: | LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19390.1); Has 294 Blast hits to 294 proteins in 98 species: Archae - 18; Bacteria - 168; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | chr5:4427960-4429029 FORWARDUPF0114 protein|uncharacterized UPF0114 domain containing protein, expressed",3.8357258]
[null,26.8,"misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases","Os06g0549300","Transcript","moderately similar to ( 406) AT4G20860 | Symbols: | FAD-binding domain-containing protein | chr4:11172726-11174318 FORWARDGlcD FAD_binding_4 protein|reticuline oxidase-like protein precursor, putative, expressed",3.1276186,null,30.5,"signalling.G-proteins","Os03g0277000","Transcript","highly similar to ( 748) AT5G09550 | Symbols: | RAB GDP-dissociation inhibitor | chr5:2963850-2966465 FORWARD GDI MRS6 protein|rab GDP dissociation inhibitor alpha, putative, expressed",2.2104716,null,"29.2.2","protein.synthesis.misc ribosomal protein","Os05g0497675","Transcript","moderately similar to ( 272) AT5G53920 | Symbols: | ribosomal protein L11 methyltransferase-related | chr5:21892124-21894087 FORWARDPrmA prmA PrmA protein|ribosomal protein L11 methyltransferase-related, putative, expressed",2.5479977]
[null,26.9,"misc.glutathione S transferases","Os03g0785900","Transcript","weakly similar to ( 180) AT1G78380 | Symbols: ATGSTU19, GST8 | ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase | chr1:29486659-29487819 REVERSEmoderately similar to ( 367) GSTU1_ORYSA Probable glutathione S-transferase GSTU1 (EC 2.5.1.18) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-4.12553,null,30.5,"signalling.G-proteins","Os07g0239400","Transcript","moderately similar to ( 242) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 244) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab11_like Rab15 Rab18 Rab3 Rab27A Rab2 Rab26 Rab4 Rab19 Rab30 RabA_like Rab5_related Rab39 Rab33B_Rab33A Rab40 Rab14 Rab6 Rab21 Rab7 Rab12 Ras_like_GTPase RJL Ras Rab32_Rab38 Rab9 COG1100 RAS Rho Rab23_lke Rap_like Rab28 Rab36_Rab34 Rab24 RHO RabL4 M_R_Ras_like Rap2 RERG_RasL11_like RalA_RalB H_N_K_Ras_like Rap1 RheB RSR1 Ras2 Ran Rit_Rin_Ric Rho4_like RabL2 Wrch_1 RhoA_like Spg1 Rac1_like ARHI_like Tc10 Rho2 RhoG RAN Miro Rop_like RGK protein|ras-related protein, putative, expressed",-1.0277327,null,"29.2.3","protein.synthesis.initiation","Os03g0758800","Transcript","moderately similar to ( 264) AT1G69410 | Symbols: ATELF5A-3, ELF5A-3 | ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3); translation initiation factor | chr1:26089301-26090194 FORWARDmoderately similar to ( 287) IF5A2_NICPL Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) Efp eIF-5a protein|eukaryotic translation initiation factor 5A, putative, expressed",-1.1058044]
[null,26.9,"misc.glutathione S transferases","Os01g0949700","Transcript","weakly similar to ( 174) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEweakly similar to ( 172) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.6883936,null,30.5,"signalling.G-proteins","Os02g0312600","Transcript","moderately similar to ( 342) AT4G35020 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase | chr4:16673176-16674540 FORWARDmoderately similar to ( 398) RAC7_ORYSA Rac-like GTP-binding protein 7 (OsRac7) (GTPase protein ROP5) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Rnd2_Rho7 Rnd1_Rho6 Rnd3_RhoE_Rho8 Ras_like_GTPase RAS COG1100 Rab21 Rab5_related H_N_K_Ras_like Rab6 M_R_Ras_like Rab8_Rab10_Rab13_like RhoBTB Rab18 Ras2 Rab11_like Rab7 RalA_RalB Rab1_Ypt1 Rap_like RheB Rab23_lke Rab19 RSR1 Rab9 Rab2 Rab27A Rab26 Rab4 RERG_RasL11_like Rap2 Rit_Rin_Ric Rap1 Rab24 Rab39 Rab3 Miro1 Rab15 Ran Rab36_Rab34 Rab14 Rab30 RabA_like Rab35 RabL2 Rab33B_Rab33A RabL4 protein|ras-related protein, putative, expressed",2.2597425,null,"29.2.3","protein.synthesis.initiation","Os03g0182700","Transcript","moderately similar to ( 319) AT4G33250 | Symbols: EIF3K, TIF3K1, ATTIF3K1 | EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K); translation initiation factor | chr4:16039066-16040617 REVERSEmoderately similar to ( 434) IF3C_ORYSA Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) SAC3_GANP protein|eukaryotic translation initiation factor 3 subunit K, putative, expressed",-0.9565379]
[null,26.9,"misc.glutathione S transferases","Os10g0527800","Transcript","weakly similar to ( 180) AT1G10360 | Symbols: ATGSTU18, GST29 | ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase | chr1:3395738-3396806 REVERSEweakly similar to ( 191) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.9627552,null,30.5,"signalling.G-proteins","Os08g0364900","Transcript","moderately similar to ( 282) AT2G43120 | Symbols: | pirin, putative | chr2:17927339-17928871 FORWARDCOG1741 Pirin Pirin_C protein|pirin, putative, expressed",-1.9497353,null,"29.2.3","protein.synthesis.initiation","Os02g0794400","Transcript","weakly similar to ( 177) AT2G24060 | Symbols: | translation initiation factor 3 (IF-3) family protein | chr2:10229453-10231390 FORWARDinfC InfC IF3_C protein|translation initiation factor IF-3, putative, expressed",1.6035123]
[null,26.9,"misc.glutathione S transferases","Os01g0949750","Transcript","moderately similar to ( 204) AT2G29420 | Symbols: ATGSTU7, GST25 | ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase | chr2:12618111-12618871 REVERSEmoderately similar to ( 222) GSTX1_TOBAC Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PGNT1/PCNT110) - Nicotiana tabacum (Common tobacco) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-2.3416748,null,30.5,"signalling.G-proteins","Os02g0668500","Transcript","weakly similar to ( 182) AT4G35750 | Symbols: | Rho-GTPase-activating protein-related | chr4:16940865-16941674 REVERSE protein|rho-GTPase-activating protein-related, putative, expressed",1.8131456,null,"29.2.3","protein.synthesis.initiation","Os02g0122300","Transcript","very weakly similar to (95.1) AT1G66070 | Symbols: | translation initiation factor-related | chr1:24596194-24597520 REVERSE eIF3_subunit protein|translation initiation factor eIF3 subunit, putative, expressed",-1.0302063]
[null,26.9,"misc.glutathione S transferases","Os10g0530500","Transcript","weakly similar to ( 191) AT1G10370 | Symbols: GST30, ATGSTU17, GST30B, ERD9 | ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase | chr1:3397274-3398273 REVERSEmoderately similar to ( 210) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",5.0363126,null,30.5,"signalling.G-proteins","Os12g0155200","Transcript","moderately similar to ( 388) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_fBEM3 protein|rhoGAP domain containing protein, expressed",1.116347,null,"29.2.3","protein.synthesis.initiation","Os01g0120800","Transcript","highly similar to ( 913) AT4G11420 | Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor | chr4:6947834-6952053 REVERSEnearly identical (1079) IF3A_MAIZE Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) - Zea mays (Maize) protein|transposon protein, putative, unclassified, expressed",-1.1516262]
[null,26.9,"misc.glutathione S transferases","Os12g0210200","Transcript","moderately similar to ( 238) AT2G02390 | Symbols: ATGSTZ1, GST18 | ATGSTZ1 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE ZETA 1); catalytic/ glutathione transferase | chr2:629015-630955 FORWARDmoderately similar to ( 324) GSTZ_WHEAT Glutathione S-transferase (EC 2.5.1.18) (GST class-zeta) - Triticum aestivum (Wheat) GST_C_Zeta Gst GST_N_Zeta protein|glutathione S-transferase, putative, expressed",1.0485562,null,30.5,"signalling.G-proteins","Os03g0843100","Transcript","moderately similar to ( 309) AT1G09630 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding | chr1:3118350-3119571 REVERSEmoderately similar to ( 291) YPTC6_CHLRE Ras-related protein YPTC6 - Chlamydomonas reinhardtii Rab11_like RAB Ras Rab Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab5_related Rab4 Rab19 Rab14 Rab18 Rab39 Rab35 Rab30 Rab6 RabA_like Rab21 Rab7 Rab32_Rab38 Rab26 Rab3 Rab12 Rab27A Ras_like_GTPase Rab33B_Rab33A Rab15 Rab40 Rab9 COG1100 Ras RJL Rab24 RAS Rab28 RabL2 Rab23_lke M_R_Ras_like Rab36_Rab34 RalA_RalB RheB Rho Ran Rap_like Ras2 RHO H_N_K_Ras_like Rho4_like RSR1 RabL4 RERG_RasL11_like Rap2 Rit_Rin_Ric Spg1 Wrch_1 Rap1 Rab20 ARHI_like RAN Rop_like Rac1_like RGK Ras_dva protein|ras-related protein, putative, expressed",-1.0404965,null,"29.2.4","protein.synthesis.elongation","Os03g0806400","Transcript","moderately similar to ( 242) AT4G26310 | Symbols: | elongation factor P (EF-P) family protein | chr4:13314006-13316066 REVERSEPRK00529 Efp PRK04542 protein|elongation factor P, putative, expressed",-1.0552033]
[null,26.9,"misc.glutathione S transferases","Os09g0467200","Transcript","moderately similar to ( 201) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEmoderately similar to ( 206) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",-1.392368,null,30.5,"signalling.G-proteins","Os02g0702600","Transcript","moderately similar to ( 463) AT1G31650 | Symbols: ATROPGEF14, ROPGEF14 | ROPGEF14; Rho guanyl-nucleotide exchange factor | chr1:11326474-11329767 REVERSEPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",4.0011487,null,"29.2.4","protein.synthesis.elongation","Os01g0698900","Transcript","weakly similar to ( 112) AT3G12390 | Symbols: | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | chr3:3942344-3943595 FORWARD protein|NAC domain containing protein, putative, expressed",3.1615646]
[null,26.9,"misc.glutathione S transferases","Os12g0123200","Transcript","weakly similar to ( 150) AT3G09270 | Symbols: ATGSTU8 | ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | chr3:2848407-2849226 REVERSEweakly similar to ( 166) GSTX6_SOYBN Probable glutathione S-transferase (EC 2.5.1.18) (Heat shock protein 26A) (G2-4) - Glycine max (Soybean) GST_C_Tau GST_N_Tau protein|glutathione S-transferase, putative, expressed",-0.99257296,null,30.5,"signalling.G-proteins","Os10g0377400","Transcript","moderately similar to ( 332) AT5G65270 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding | chr5:26083437-26084550 FORWARDmoderately similar to ( 343) RB11D_TOBAC Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab2 Rab4 Rab5_related Rab1_Ypt1 Rab8_Rab10_Rab13_like Rab14 Rab19 Rab18 Rab6 Rab39 Rab30 Rab35 RabA_like Rab26 Rab7 Rab21 Rab3 Rab32_Rab38 Rab27A Rab33B_Rab33A Ras Ras_like_GTPase Rab15 Rab40 Rab12 RAS Rab9 COG1100 RJL Rab23_lke Rab28 RheB Rab24 Rab36_Rab34 RalA_RalB M_R_Ras_like Rap_like RabL2 Rho Ran Ras2 H_N_K_Ras_like RSR1 Rap1 RERG_RasL11_like Rit_Rin_Ric RabL4 RHO Spg1 ARHI_like Rap2 Rho4_like Rab20 RAN Wrch_1 RGK RhoA_like protein|ras-related protein, putative, expressed",-1.4349331,null,"29.2.4","protein.synthesis.elongation","Os07g0229700","Transcript","moderately similar to ( 261) AT2G38560 | Symbols: TFIIS | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS); DNA binding / RNA polymerase II transcription elongation factor/ transcription factor | chr2:16134802-16136319 FORWARD TFIIS_M TFS2M protein|transcription elongation factor protein, putative, expressed",3.2081091]
[null,26.9,"misc.glutathione S transferases","Os10g0529300","Transcript","moderately similar to ( 213) AT1G10360 | Symbols: ATGSTU18, GST29 | ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase | chr1:3395738-3396806 REVERSEmoderately similar to ( 228) GSTU6_ORYSA Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",5.40127,null,30.5,"signalling.G-proteins","Os05g0513800","Transcript","moderately similar to ( 358) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 438) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Ras_like_GTPase Rnd3_RhoE_Rho8 Rnd2_Rho7 COG1100 Rnd1_Rho6 RAS Rab21 Rab5_related H_N_K_Ras_like Rab6 Rab8_Rab10_Rab13_like Rab7 Rab18 Rab1_Ypt1 M_R_Ras_like Rab9 Rab11_like Rap_like RheB Rab23_lke RhoBTB RalA_RalB Ras2 RSR1 Rab27A Rab2 Rab19 Ran Rap1 Rab4 Rab26 Rap2 Rab39 RERG_RasL11_like Rit_Rin_Ric Rab14 Rab24 Rab3 Miro1 Rab15 RabA_like Rab35 Rab36_Rab34 Rab30 Rab32_Rab38 RJL RabL2 protein|ras-related protein, putative, expressed",3.4570682,null,"29.2.4","protein.synthesis.elongation","Os12g0115900","Transcript","moderately similar to ( 301) AT3G08740 | Symbols: | elongation factor P (EF-P) family protein | chr3:2654788-2656154 REVERSEPRK00529 Efp PRK04542 PRK12426 EFP_N Elong-fact-P_C protein|elongation factor P, putative, expressed",2.7061088]
[null,26.9,"misc.glutathione S transferases","Os03g0135100","Transcript","weakly similar to ( 161) AT3G03190 | Symbols: ATGSTF11, ATGSTF6 | ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11); glutathione transferase | chr3:735071-735877 FORWARDweakly similar to ( 146) GSTF1_TOBAC Glutathione S-transferase PARB (EC 2.5.1.18) (GST class-phi) - Nicotiana tabacum (Common tobacco) GST_C_Phi Gst GST_N_Phi protein|glutathione S-transferase, putative, expressed",3.5501435,null,30.5,"signalling.G-proteins","Os02g0638900","Transcript","moderately similar to ( 402) AT3G15470 | Symbols: | WD-40 repeat family protein | chr3:5216630-5219868 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.129971,null,"29.2.4","protein.synthesis.elongation","Os02g0519900","Transcript","nearly identical (1622) AT1G56070 | Symbols: LOS1 | LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding | chr1:20968245-20971077 REVERSEnearly identical (1611) EF2_BETVU Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) PRK07560 FusA EF2 aeEF2_snRNP_like_IV EF2_IV_snRNP Snu114p GTP_EFTU PRK12740 GTP_translation_factor eEF2_snRNP_like_C PRK12739 EFG_IV TypA_BipA LepA PRK05433 eEF2_snRNP_like_II LepA TypA EF-G eEF2_C_snRNP TetM_like PRK00007 PRK10218 EFG_C Elongation_Factor_C EF-G_bact RF3 eEF2_II_snRNP PrfC protein|elongation factor, putative, expressed",-0.99648]
[null,26.9,"misc.glutathione S transferases","Os07g0152700","Transcript","weakly similar to ( 168) AT1G78370 | Symbols: ATGSTU20 | ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20); glutathione transferase | chr1:29484428-29485204 REVERSEweakly similar to ( 174) GSTXA_TOBAC Probable glutathione S-transferase parA (EC 2.5.1.18) (Auxin-regulated protein parA) (STR246C protein) - Nicotiana tabacum (Common tobacco) GST_C_Tau GST_N_Tau protein|glutathione S-transferase, N-terminal domain containing protein, expressed",-1.935855,null,30.5,"signalling.G-proteins","Os03g0819900","Transcript","moderately similar to ( 288) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 286) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab26 Rab11_like Rab18 Rab3 Rab2 RabA_like Rab4 Rab15 Rab27A Rab5_related Rab19 Rab30 Rab39 Rab14 Rab21 Rab7 Rab33B_Rab33A Rab6 Rab40 Rab12 Ras_like_GTPase Ras Rab32_Rab38 RJL RAS Rho Rap_like Rab9 COG1100 RalA_RalB Rab23_lke RHO H_N_K_Ras_like Rab36_Rab34 M_R_Ras_like Rab28 Rap1 Rab24 Ras2 Rap2 RSR1 RabL4 Ran RheB RERG_RasL11_like Rho4_like Rit_Rin_Ric Wrch_1 RhoA_like RabL2 ARHI_like Rac1_like Spg1 RAN RGK Rho2 Tc10 Rop_like RhoG Rab20 Miro protein|ras-related protein, putative, expressed",-1.2907563,null,"29.2.4","protein.synthesis.elongation","Os01g0752700","Transcript","highly similar to ( 906) AT2G31060 | Symbols: | elongation factor family protein | chr2:13213496-13218544 REVERSEvery weakly similar to (81.6) EF2_BETVU Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) TypA PRK10218 TypA_BipA LepA PRK05433 GTP_EFTU PRK07560 GTP_translation_factor LepA EF2 FusA EF-G Snu114p TetM_like PRK12739 TEF1 PRK00007 PRK12317 BipA_TypA_C PRK12740 TufB PRK00049 PRK12735 PRK12736 BipA_TypA_II tufA EF-G_bact RF3 PrfC EF1_alpha prfC CysN protein|GTP-binding protein typA/bipA, putative, expressed",-0.9452321]
[null,26.9,"misc.glutathione S transferases","Os01g0371500","Transcript","moderately similar to ( 201) AT3G62760 | Symbols: ATGSTF13 | ATGSTF13; glutathione transferase | chr3:23217425-23218246 REVERSEmoderately similar to ( 272) GSTH1_ORYSA Probable glutathione S-transferase GSTF1 (EC 2.5.1.18) (GST-I) - Oryza sativa (Rice) GST_C_Phi GST_N_Phi Gst GST_N_GTT1_like protein|glutathione S-transferase, putative, expressed",1.7612106,null,30.5,"signalling.G-proteins","Os06g0551400","Transcript","moderately similar to ( 362) AT4G18800 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding | chr4:10320156-10321339 REVERSEmoderately similar to ( 414) RIC2_ORYSA Ras-related protein RIC2 - Oryza sativa (Rice) Rab11_like RAB Ras Rab Rab2 Rab5_related Rab4 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab14 Rab18 Rab19 Rab39 RabA_like Rab6 Rab30 Rab35 Rab26 Rab7 Rab21 Rab32_Rab38 Rab33B_Rab33A Rab3 Rab27A Rab15 Ras_like_GTPase Rab40 Rab9 Ras Rab12 COG1100 RAS Rab23_lke RJL RabL2 Rho Rab24 RHO Rab36_Rab34 Ras2 Rap_like RalA_RalB M_R_Ras_like Ran Rab28 RheB Rho4_like RERG_RasL11_like Wrch_1 RabL4 Rap2 H_N_K_Ras_like Rap1 RSR1 ARHI_like Spg1 RhoG Rac1_like Rho3 RhoA_like RGK Rab20 Rho2 Rit_Rin_Ric RAN Miro Rop_like protein|ras-related protein, putative, expressed",-1.1777105,null,"29.2.4","protein.synthesis.elongation","Os02g0729500","Transcript","very weakly similar to (96.3) AT4G22780 | Symbols: ACR7 | ACR7; amino acid binding | chr4:11968696-11970956 REVERSEACT_ACR_2 protein|ACT domain-containing protein, putative, expressed",1.2128259]
[null,26.9,"misc.glutathione S transferases","Os07g0468100","Transcript","weakly similar to ( 172) AT1G17170 | Symbols: ATGSTU24, GST | ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24); glutathione binding / glutathione transferase | chr1:5869895-5870691 FORWARDmoderately similar to ( 217) GSTU1_ORYSA Probable glutathione S-transferase GSTU1 (EC 2.5.1.18) - Oryza sativa (Rice) GST_C_Tau GST_N_Tau Gst protein|glutathione S-transferase, putative, expressed",2.6875527,null,30.5,"signalling.G-proteins","Os06g0622800","Transcript","highly similar to ( 675) AT4G38200 | Symbols: | guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.1607436,null,"29.2.4","protein.synthesis.elongation","Os02g0220500","Transcript","moderately similar to ( 360) AT1G09640 | Symbols: | elongation factor 1B-gamma, putative / eEF-1B gamma, putative | chr1:3120162-3122152 FORWARDmoderately similar to ( 320) EF1G2_ORYSA Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) EF1G protein|elongation factor 1-gamma, putative, expressed",-1.0122665]
[null,26.1,"misc.cytochrome P450","Os06g0641500","Transcript","moderately similar to ( 264) AT5G24950 | Symbols: CYP71A15 | CYP71A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8595209-8597761 REVERSEmoderately similar to ( 333) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",3.102296,null,30.5,"signalling.G-proteins","Os03g0823700","Transcript","moderately similar to ( 359) AT1G07410 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding | chr1:2276270-2277154 FORWARDmoderately similar to ( 365) RB11C_LOTJA Ras-related protein Rab11C - Lotus japonicus Rab11_like RAB Ras Rab Rab8_Rab10_Rab13_like Rab2 Rab5_related Rab4 Rab1_Ypt1 Rab14 Rab19 Rab18 Rab39 Rab6 Rab35 Rab30 Rab26 RabA_like Rab21 Rab15 Rab3 Rab27A Rab7 Rab32_Rab38 Rab12 Ras_like_GTPase Ras Rab33B_Rab33A RJL Rab40 RAS Rab9 COG1100 Rab23_lke RalA_RalB Rab24 Ras2 RheB RabL2 M_R_Ras_like Rap_like Rab28 RERG_RasL11_like Rab36_Rab34 H_N_K_Ras_like Rho Ran RSR1 RabL4 Rap1 RHO Rap2 Rho4_like Spg1 ARHI_like Rit_Rin_Ric Wrch_1 Rab20 RAN Miro RGK RhoA_like protein|ras-related protein, putative, expressed",-1.1662737,null,"29.2.4","protein.synthesis.elongation","Os03g0121700","Transcript","weakly similar to ( 134) AT3G49470 | Symbols: NACA2 | NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | chr3:18341072-18342273 FORWARD protein|nascent polypeptide-associated complex subunit alpha, putative, expressed",3.0898573]
[null,26.1,"misc.cytochrome P450","Os10g0378100","Transcript","weakly similar to ( 152) AT2G32440 | Symbols: KAO2, CYP88A4 | KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding | chr2:13775668-13777783 FORWARDweakly similar to ( 147) KAO1_HORVU Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) CypX p450 protein|cytochrome P450, putative, expressed",2.1656606,null,30.5,"signalling.G-proteins","Os11g0153400","Transcript","moderately similar to ( 376) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",2.5257094,null,"29.2.4","protein.synthesis.elongation","Os02g0595700","Transcript","highly similar to ( 647) AT4G20360 | Symbols: ATRAB8D, ATRABE1B | ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | chr4:10990036-10991466 FORWARDhighly similar to ( 650) EFTU2_SOYBN Elongation factor Tu, chloroplast precursor (EF-Tu) - Glycine max (Soybean) tufA PRK00049 PRK12735 PRK12736 TufB EF_Tu PRK12317 TEF1 GTP_EFTU SelB GTP_translation_factor EF1_alpha EFTU_III GTPBP1 PRK04000 EFTU_II GCD11 CysN GTP_EFTU_D3 PRK10512 SelB CysN_ATPS TypA eIF2_gamma SelB_euk PRK05506 cysN infB TetM_like FusA PRK07560 mtEFTU_III PRK10218 InfB EF2 TypA_BipA EF-G_bact PRK12740 LepA selB_II protein|elongation factor Tu, putative, expressed",2.9809444]
[null,26.1,"misc.cytochrome P450","Os09g0264400","Transcript","moderately similar to ( 402) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 395) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",4.044229,null,30.5,"signalling.G-proteins","Os05g0567300","Transcript","moderately similar to ( 326) AT5G66470 | Symbols: | GTP binding / RNA binding | chr5:26541986-26544302 REVERSE era Era Era engA COG1160 MMR_HSR1 EngA1 Era_like ThdF trmE EngA2 trmE Obg_like YihA_EngB Obg protein|GTP-binding protein, putative, expressed",1.4644338,null,"29.2.4","protein.synthesis.elongation","Os04g0270100","Transcript","highly similar to ( 694) AT1G18070 | Symbols: | EF-1-alpha-related GTP-binding protein, putative | chr1:6214236-6218211 REVERSEmoderately similar to ( 278) EF1A_MAIZE Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) TEF1 PRK12317 EF1_alpha CysN PRK05506 CysN_ATPS GTP_EFTU cysN eRF3c_III tufA TufB PRK12736 PRK12735 PRK00049 eRF3_II eRF3_II_like GTPBP1 SelB GTP_translation_factor EF_Tu PRK04000 SelB GCD11 HBS1_C protein|elongation factor Tu, putative, expressed",-0.9735505]
[null,26.1,"misc.cytochrome P450","Os02g0173100","Transcript","highly similar to ( 803) AT4G15110 | Symbols: CYP97B3 | CYP97B3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:8629922-8632993 REVERSEhighly similar to ( 825) C97B2_SOYBN Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.1731826,null,30.5,"signalling.G-proteins","Os05g0454200","Transcript","very weakly similar to (95.9) AT5G05940 | Symbols: ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide exchange factor | chr5:1786028-1788363 FORWARDPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",3.3420017,null,"29.2.4","protein.synthesis.elongation","Os12g0541500","Transcript","moderately similar to ( 207) AT4G29060 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARDRpsA Tex rpsA protein|elongation factor TS family protein, expressed",3.6308708]
[null,26.1,"misc.cytochrome P450","Os12g0582000","Transcript","moderately similar to ( 320) AT4G37310 | Symbols: CYP81H1 | CYP81H1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17556152-17558833 REVERSEmoderately similar to ( 219) C82A4_SOYBN Cytochrome P450 82A4 (EC 1.14.-.-) (P450 CP9) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.2817377,null,30.5,"signalling.G-proteins","Os01g0621300","Transcript","moderately similar to ( 218) AT2G46380 | Symbols: | unknown protein | chr2:19039377-19042171 FORWARD protein|extra-large G-protein-related, putative, expressed",0.98546124,null,"29.2.5","protein.synthesis.release","Os05g0375600","Transcript","moderately similar to ( 305) AT3G57190 | Symbols: | peptide chain release factor, putative | chr3:21166468-21168198 FORWARD prfB PRK05589 PRK06746 PRK07245 PrfB PRK07342 PRK08787 PrfA prfA protein|peptide chain release factor 2, putative, expressed",3.9005356]
[null,26.1,"misc.cytochrome P450","Os05g0424300","Transcript","moderately similar to ( 246) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 278) C71A2_SOLME Cytochrome P450 71A2 (EC 1.14.-.-) (CYPLXXIA2) (P-450EG4) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",-1.4884156,null,30.5,"signalling.G-proteins","Os12g0533400","Transcript","moderately similar to ( 404) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP_fBEM3 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",1.8788124,null,"29.2.6","protein.synthesis.ribosomal RNA","Os04g0620700","Transcript","weakly similar to ( 138) AT1G48920 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid binding / nucleotide binding | chr1:18098186-18101422 FORWARD protein|nucleolin, putative, expressed",-1.1026945]
[null,26.1,"misc.cytochrome P450","Os10g0378000","Transcript","weakly similar to ( 144) AT2G32440 | Symbols: KAO2, CYP88A4 | KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding | chr2:13775668-13777783 FORWARDweakly similar to ( 137) KAO1_HORVU Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) CypX protein|ent-kaurenoic acid oxidase 1, putative, expressed",1.8747015,null,30.5,"signalling.G-proteins","Os03g0781000","Transcript","highly similar to ( 540) AT1G56050 | Symbols: | GTP-binding protein-related | chr1:20963793-20966181 FORWARD PRK09601 YchF COG0012 Obg_like DUF933 TGS_YchF_C PRK09602 Ygr210 Obg Obg obgE obgE MMR_HSR1 DRG protein|GTP-binding protein, putative, expressed",1.9863502,null,"29.2.6","protein.synthesis.ribosomal RNA","Os04g0685100","Transcript","moderately similar to ( 282) AT2G37990 | Symbols: | ribosome biogenesis regulatory protein (RRS1) family protein | chr2:15900713-15903028 FORWARD RRS1 protein|ribosome biogenesis regulatory protein, putative, expressed",-1.0797013]
[null,26.1,"misc.cytochrome P450","Os05g0101600","Transcript","moderately similar to ( 310) AT1G19630 | Symbols: CYP722A1 | CYP722A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:6785427-6787967 REVERSEweakly similar to ( 131) C90D2_ORYSA Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) p450 CypX protein|cytochrome P450, putative, expressed",1.2058522]
[null,26.1,"misc.cytochrome P450","Os12g0582700","Transcript","moderately similar to ( 320) AT4G37360 | Symbols: CYP81D2 | CYP81D2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17567124-17568858 REVERSEmoderately similar to ( 223) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",1.8259779,null,21.1,"redox.thioredoxin","Os08g0250700","Transcript","moderately similar to ( 206) AT2G18990 | Symbols: TXND9 | TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG) | chr2:8238851-8239932 REVERSE Phd_like_TxnDC9 Phd_like protein|thioredoxin domain-containing protein 9, putative, expressed",-1.0307056,null,29.1,"protein.aa activation","Os11g0604700","Transcript","moderately similar to ( 272) AT5G66410 | Symbols: PLP3b | PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding | chr5:26519909-26521459 FORWARD Phd_like_TxnDC9 Phd_like protein|thioredoxin domain-containing protein 9, putative, expressed",-1.2840924]
[null,26.1,"misc.cytochrome P450","Os03g0248300","Transcript","moderately similar to ( 409) AT2G45570 | Symbols: CYP76C2 | CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18779935-18781922 REVERSEmoderately similar to ( 315) C76A2_SOLME Cytochrome P450 76A2 (EC 1.14.-.-) (CYPLXXVIA2) (P-450EG7) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",2.731105,null,21.1,"redox.thioredoxin","Os07g0186000","Transcript","very weakly similar to (90.5) AT3G51030 | Symbols: ATTRX1, ATTRX H1 | ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | chr3:18951123-18951955 REVERSEweakly similar to ( 130) TRXH_ORYSA Thioredoxin H-type (TRX-H) (Phloem sap 13 kDa protein 1) - Oryza sativa (Rice) protein|thioredoxin, putative, expressed",-1.968882,null,29.1,"protein.aa activation","Os12g0540900","Transcript","highly similar to ( 599) AT3G04600 | Symbols: | tRNA synthetase class I (W and Y) family protein | chr3:1243152-1245958 FORWARD PRK12285 TrpRS_core TrpS Tyr_Trp_RS_core PRK08560 tRNA-synt_1b protein|tRNA synthetase, putative, expressed",1.3194551]
[null,26.1,"misc.cytochrome P450","Os02g0185300","Transcript","moderately similar to ( 282) AT3G26230 | Symbols: CYP71B24 | CYP71B24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9598200-9599892 REVERSEmoderately similar to ( 357) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450 71D10, putative, expressed",-1.1336023,null,21.1,"redox.thioredoxin","Os11g0528500","Transcript","weakly similar to ( 154) AT5G51010 | Symbols: | rubredoxin family protein | chr5:20744615-20745344 FORWARD protein|rubredoxin family protein, putative, expressed",2.0186002,null,29.1,"protein.aa activation","Os01g0743400","Transcript","moderately similar to ( 498) AT2G25840 | Symbols: OVA4 | OVA4 (ovule abortion 4); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tryptophan-tRNA ligase | chr2:11021924-11025158 FORWARD PRK00927 TrpS TrpRS_core Tyr_Trp_RS_core tRNA-synt_1b PRK12283 PRK12284 PRK12556 PRK12282 protein|tRNA synthetase, putative, expressed",2.165901]
[null,26.1,"misc.cytochrome P450","Os10g0515200","Transcript","moderately similar to ( 460) AT1G64940 | Symbols: CYP89A6 | CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:24123789-24125324 FORWARDmoderately similar to ( 322) C77A3_SOYBN Cytochrome P450 77A3 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|transposon protein, putative, unclassified, expressed",-1.4838794,null,21.1,"redox.thioredoxin","Os05g0156300","Transcript","moderately similar to ( 498) AT2G47470 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | chr2:19481503-19483683 FORWARDmoderately similar to ( 498) PDIA6_MEDSA Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) PDI_a_ERp38 PDI_a_family Thioredoxin PDI_a_PDI_a'_C PDI_a_P5 PDI_a_ERp46 PDI_a_MPD1_like ERp29 PDI_a_PDIR PDI_a_ERdj5_C PDI_a_QSOX ERp29c PDI_a_TMX3 PDI_a_ERp44 TRX_family protein|OsPDIL2-1 protein disulfide isomerase PDIL2-1, expressed",-1.3293839,null,"29.1.4","protein.aa activation.leucine-tRNA ligase","Os01g0120300","Transcript","nearly identical (1067) AT4G04350 | Symbols: EMB2369 | EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | chr4:2128129-2133030 FORWARD leuS LeuS ValS LeuRS_core ileS IleS Ile_Leu_Val_MetRS_core tRNA-synt_1 protein|tRNA synthetase class I, putative, expressed",1.3658978]
[null,26.1,"misc.cytochrome P450","Os03g0140100","Transcript","moderately similar to ( 464) AT4G39490 | Symbols: CYP96A10 | CYP96A10; electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:18365229-18366788 FORWARDweakly similar to ( 114) C82A1_PEA Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment) - Pisum sativum (Garden pea) p450 CypX protein|cytochrome P450 protein, putative, expressed",1.8545698,null,21.1,"redox.thioredoxin","Os09g0559600","Transcript","protein|thioredoxin, putative, expressed",-1.6462044,null,"29.1.6","protein.aa activation.lysine-tRNA ligase","Os02g0623500","Transcript","highly similar to ( 778) AT3G13490 | Symbols: OVA5, ATKRS-2 | OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | chr3:4395984-4399302 REVERSEmoderately similar to ( 335) SYK_ORYSA Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) lysS LysU LysRS_core lysS PRK12445 tRNA-synt_2 Asp_Lys_Asn_RS_core COG2269 aspC PRK09350 AsnS LysRS_N AsxRS_core aspS AspS asnC PRK12820 protein|tRNA synthetases class II domain containing protein, expressed",1.184189]
[null,26.1,"misc.cytochrome P450","Os11g0119700","Transcript","moderately similar to ( 311) AT5G24910 | Symbols: CYP714A1 | CYP714A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8567674-8570260 REVERSEweakly similar to ( 176) C72A1_CATRO Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) p450 CypX protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",2.4014504,null,21.1,"redox.thioredoxin","Os01g0963400","Transcript","weakly similar to ( 173) AT1G76760 | Symbols: ATY1, TRX-Y1 | ATY1 (ARABIDOPSIS THIOREDOXIN Y1); electron carrier/ protein disulfide oxidoreductase | chr1:28811873-28812948 REVERSEvery weakly similar to (94.4) TRXM_CHLRE Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii TRX_family Thioredoxin PRK10996 PDI_a_family protein|thioredoxin, putative, expressed",1.5503508,null,"29.1.11","protein.aa activation.serine-tRNA ligase","Os11g0610900","Transcript","highly similar to ( 698) AT1G11870 | Symbols: ATSRS, OVA7, SRS | SRS (SERYL-TRNA SYNTHETASE); serine-tRNA ligase | chr1:4003895-4006556 FORWARDmoderately similar to ( 238) SYS_HELAN Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) PRK05431 SerS SerRS_core tRNA-synt_2b Seryl_tRNA_N Gly_His_Pro_Ser_Thr_tRS_core protein|seryl-tRNA synthetase, putative, expressed",2.055989]
[null,26.1,"misc.cytochrome P450","Os06g0641800","Transcript","moderately similar to ( 268) AT3G26210 | Symbols: CYP71B23 | CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9593329-9595202 REVERSEmoderately similar to ( 336) C71DB_LOTJA Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment) - Lotus japonicus p450 CypX protein|cytochrome P450, putative, expressed",1.4135418,null,21.1,"redox.thioredoxin","Os06g0220800","Transcript","moderately similar to ( 206) AT1G34780 | Symbols: ATAPRL4 | ATAPRL4 (APR-like 4) | chr1:12748835-12750124 REVERSE PDI_a_ERp44_like protein|OsAPRL2 adenosine 5'-phosphosulfate reductase-like OsAPRL2, expressed",-1.2363266,null,"29.1.22","protein.aa activation.asparagine-tRNA ligase","Os07g0485400","Transcript","highly similar to ( 551) AT4G17300 | Symbols: NS1, OVA8, ATNS1 | NS1; asparagine-tRNA ligase | chr4:9681558-9684833 FORWARD asnC AsnS AsxRS_core aspC tRNA-synt_2 EcAsnRS_like_N PRK06462 protein|tRNA synthetases class II domain containing protein, expressed",1.5241178]
[null,26.1,"misc.cytochrome P450","Os10g0317900","Transcript","moderately similar to ( 493) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDhighly similar to ( 503) F3PH_PETHY Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",6.3679175,null,21.1,"redox.thioredoxin","Os03g0321400","Transcript","highly similar to ( 517) AT1G36050 | Symbols: | unknown protein | chr1:13450467-13453055 FORWARD DUF1692 protein|endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed",-1.113903]
[null,26.1,"misc.cytochrome P450","Os02g0504000","Transcript","moderately similar to ( 308) AT4G37370 | Symbols: CYP81D8 | CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr4:17569971-17571678 REVERSEmoderately similar to ( 226) C82A3_SOYBN Cytochrome P450 82A3 (EC 1.14.-.-) (P450 CP6) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",-1.5094649,null,21.1,"redox.thioredoxin","Os01g0339900","Transcript","highly similar to ( 501) AT2G47470 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | chr2:19481503-19483683 FORWARDhighly similar to ( 504) PDIA6_MEDSA Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) PDI_a_ERp38 PDI_a_family Thioredoxin PDI_a_PDI_a'_C PDI_a_P5 ERp29 PDI_a_ERp46 PDI_a_MPD1_like ERp29c PDI_a_PDIR PDI_a_ERdj5_C PDI_a_QSOX PDI_a_ERp44 PDI_a_TMX3 TRX_family protein|OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed",-1.0687809,null,33.99,"development.unspecified","Os01g0117900","Transcript","moderately similar to ( 381) AT3G18200 | Symbols: | nodulin MtN21 family protein | chr3:6234509-6235531 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3783941]
[null,26.1,"misc.cytochrome P450","Os02g0601500","Transcript","moderately similar to ( 262) AT3G26310 | Symbols: CYP71B35 | CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9641089-9642779 REVERSEmoderately similar to ( 343) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",-3.1112576,null,21.1,"redox.thioredoxin","Os05g0200100","Transcript","moderately similar to ( 214) AT4G29670 | Symbols: ACHT2 | thioredoxin family protein | chr4:14535983-14537108 REVERSE protein|thioredoxin, putative, expressed",1.0343539,null,33.99,"development.unspecified","Os01g0208000","Transcript","moderately similar to ( 247) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.9492868]
[null,26.1,"misc.cytochrome P450","Os08g0105800","Transcript","moderately similar to ( 302) AT3G48310 | Symbols: CYP71A22 | CYP71A22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17888192-17889749 FORWARDmoderately similar to ( 476) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",1.3801135,null,21.1,"redox.thioredoxin","Os05g0587300","Transcript","moderately similar to ( 311) AT2G42580 | Symbols: TTL3, VIT | TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3); binding / protein binding | chr2:17728855-17731461 FORWARD protein|TTL3, putative, expressed",3.1235893,null,33.99,"development.unspecified","Os01g0217000","Transcript","moderately similar to ( 385) AT1G29050 | Symbols: | unknown protein | chr1:10136376-10139082 REVERSEDUF231 protein|powdery mildew resistant protein 5, putative, expressed",1.8833987]
[null,26.1,"misc.cytochrome P450","Os08g0106300","Transcript","moderately similar to ( 337) AT3G48280 | Symbols: CYP71A25 | CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17879594-17881164 FORWARDhighly similar to ( 541) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",4.8711514,null,21.1,"redox.thioredoxin","Os07g0684100","Transcript","weakly similar to ( 199) AT1G08570 | Symbols: ACHT4 | ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | chr1:2713604-2714312 FORWARD protein|thioredoxin, putative, expressed",2.8107865,null,33.2,"development.late embryogenesis abundant","Os01g0225600","Transcript","weakly similar to ( 183) AT1G01470 | Symbols: LEA14, LSR3 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | chr1:172295-172826 REVERSEmoderately similar to ( 206) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",1.7882758]
[null,26.1,"misc.cytochrome P450","Os08g0106000","Transcript","moderately similar to ( 347) AT3G48280 | Symbols: CYP71A25 | CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17879594-17881164 FORWARDhighly similar to ( 559) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) p450 CypX protein|cytochrome P450, putative, expressed",5.1527634,null,21.1,"redox.thioredoxin","Os07g0657900","Transcript","highly similar to ( 741) AT2G41680 | Symbols: NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase | chr2:17376349-17379028 REVERSE TrxB PRK10262 AhpF TRX_NTR Pyr_redox_2 Lpd PRK11749 PRK12831 TRX_family gltD GltD protein|bifunctional thioredoxin reductase/thioredoxin, putative, expressed",1.8899571,null,33.99,"development.unspecified","Os01g0254100","Transcript","nearly identical (1576) AT3G16830 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) | chr3:5731709-5737531 FORWARD WD40 COG2319 protein|lissencephaly type-1-like homology motif, putative, expressed",-1.1587647]
[null,26.1,"misc.cytochrome P450","Os08g0152300","Transcript","moderately similar to ( 305) AT1G64940 | Symbols: CYP89A6 | CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr1:24123789-24125324 FORWARDmoderately similar to ( 219) C77A1_SOLME Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1) (P-450EG6) (Fragment) - Solanum melongena (Eggplant) (Aubergine) p450 CypX protein|cytochrome P450, putative, expressed",1.2504189,null,21.1,"redox.thioredoxin","Os05g0480200","Transcript","weakly similar to ( 124) AT3G08710 | Symbols: ATH9 | ATH9 (thioredoxin H-type 9) | chr3:2645590-2646304 FORWARDweakly similar to ( 103) TRXH_BRARA Thioredoxin H-type (TRX-H) - Brassica rapa (Turnip) TRX_family Thioredoxin protein|thioredoxin, putative, expressed",1.7853955,null,33.2,"development.late embryogenesis abundant","Os01g0574800","Transcript","Hin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.6755605]
[null,26.1,"misc.cytochrome P450","Os06g0294600","Transcript","moderately similar to ( 284) AT2G45570 | Symbols: CYP76C2 | CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18779935-18781922 REVERSEmoderately similar to ( 224) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.8447745,null,21.1,"redox.thioredoxin","Os02g0819200","Transcript","weakly similar to ( 149) AT5G04260 | Symbols: WCRKC2 | WCRKC2 (WCRKC THIOREDOXIN 2) | chr5:1178901-1180022 REVERSE protein|thioredoxin, putative, expressed",-0.98071957,null,33.99,"development.unspecified","Os01g0672100","Transcript","moderately similar to ( 351) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.7783573]
[null,26.1,"misc.cytochrome P450","Os04g0573900","Transcript","moderately similar to ( 357) AT2G44890 | Symbols: CYP704A1 | CYP704A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr2:18508392-18510290 REVERSEvery weakly similar to (80.1) C97B1_PEA Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) p450 CypX protein|cytochrome P450, putative, expressed",-1.538496,null,21.1,"redox.thioredoxin","Os10g0500700","Transcript","moderately similar to ( 427) AT4G04950 | Symbols: | thioredoxin family protein | chr4:2517882-2519924 REVERSE GRX_PICOT_like COG0278 TRX_PICOT PRK10824 GRX_family TRX_family protein|OsGrx_S17 - glutaredoxin subgroup II, expressed",-1.1988082,null,33.99,"development.unspecified","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854]
[null,26.1,"misc.cytochrome P450","Os07g0517900","Transcript","weakly similar to ( 189) AT5G36110 | Symbols: CYP716A1 | CYP716A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:14195377-14197613 FORWARDweakly similar to ( 138) C85A_PHAVU Cytochrome P450 85A (EC 1.14.-.-) (C6-oxidase) - Phaseolus vulgaris (Kidney bean) (French bean) CypX p450 protein|hydroxylase, putative, expressed",2.2067585,{"$nulls":8},33.99,"development.unspecified","Os01g0776400","Transcript","highly similar to ( 520) AT2G16405 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:7105915-7108787 REVERSE WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9476285]
[null,26.1,"misc.cytochrome P450","Os12g0119000","Transcript","moderately similar to ( 445) AT5G24910 | Symbols: CYP714A1 | CYP714A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8567674-8570260 REVERSEmoderately similar to ( 255) C72A1_CATRO Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) p450 CypX protein|cytochrome P450 72A1, putative, expressed",2.4901547,null,21.2,"redox.ascorbate and glutathione","Os08g0101700","Transcript","weakly similar to ( 137) AT4G25570 | Symbols: ACYB-2 | ACYB-2; carbon-monoxide oxygenase | chr4:13053887-13055518 REVERSE Cytochrom_B561 B561 protein|cytochrome b561, putative, expressed",1.7257352,null,33.99,"development.unspecified","Os01g0803300","Transcript","moderately similar to ( 417) AT5G07050 | Symbols: | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). | chr5:2191533-2193416 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3495276]
[null,26.1,"misc.cytochrome P450","Os03g0112900","Transcript","moderately similar to ( 473) AT4G36220 | Symbols: FAH1, CYP84A1 | FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase | chr4:17137584-17139619 REVERSEmoderately similar to ( 263) F3PH_PETHY Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",1.2192672,null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os07g0694700","Transcript","moderately similar to ( 269) AT1G07890 | Symbols: APX1, CS1 | APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | chr1:2438005-2439435 FORWARDmoderately similar to ( 327) APX2_ORYSA L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb) (OsAPx02) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG protein|OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed",-1.2588414,null,33.99,"development.unspecified","Os01g0823500","Transcript","weakly similar to ( 102) AT1G06920 | Symbols: ATOFP4, OFP4 | OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4) | chr1:2124854-2125801 REVERSEDUF623 protein|DUF623 domain containing protein, expressed",2.3226073]
[null,26.1,"misc.cytochrome P450","Os02g0817900","Transcript","highly similar to ( 784) AT1G31800 | Symbols: CYP97A3, LUT5 | CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3); carotene beta-ring hydroxylase/ oxygen binding | chr1:11396440-11399470 FORWARDmoderately similar to ( 449) C97B2_SOYBN Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.516514,null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os04g0223300","Transcript","moderately similar to ( 405) AT4G35000 | Symbols: APX3 | APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase | chr4:16665007-16667541 REVERSEhighly similar to ( 542) APX3_ORYSA Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG secretory_peroxidase catalase_peroxidase protein|OsAPx3 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8, expressed",4.304131,null,33.99,"development.unspecified","Os01g0826900","Transcript","highly similar to ( 783) AT3G56140 | Symbols: | unknown protein | chr3:20829407-20832669 FORWARDDUF399 protein|expressed protein",1.6502084]
[null,26.1,"misc.cytochrome P450","Os06g0640800","Transcript","moderately similar to ( 291) AT5G24950 | Symbols: CYP71A15 | CYP71A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:8595209-8597761 REVERSEmoderately similar to ( 348) C71D8_SOYBN Cytochrome P450 71D8 (EC 1.14.-.-) (P450 CP7) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",2.0970457,null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os02g0553200","Transcript","moderately similar to ( 467) AT1G77490 | Symbols: TAPX | TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | chr1:29117688-29120046 FORWARDhighly similar to ( 654) APX8_ORYSA Probable L-ascorbate peroxidase 8, chloroplast precursor (EC 1.11.1.11) (OsAPx08) - Oryza sativa (Rice)ascorbate_peroxidase plant_peroxidase peroxidase KatG secretory_peroxidase catalase_peroxidase protein|OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed",2.374568,null,33.99,"development.unspecified","Os01g0833000","Transcript","highly similar to ( 560) AT5G39980 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16001036-16003072 REVERSEweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.97713]
[null,26.1,"misc.cytochrome P450","Os04g0469800","Transcript","moderately similar to ( 243) AT3G50660 | Symbols: DWF4, CYP90B1, CLM, SNP2, SAV1 | DWF4 (DWARF 4); steroid 22-alpha hydroxylase | chr3:18814262-18817168 REVERSEhighly similar to ( 642) C724B_ORYSA Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) CypX p450 protein|cytochrome P450, putative, expressed",2.068486,null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os06g0232600","Transcript","moderately similar to ( 346) AT5G16710 | Symbols: DHAR3 | DHAR3 (dehydroascorbate reductase 1); glutathione dehydrogenase (ascorbate) | chr5:5483312-5484926 FORWARD GST_C_DHAR GST_C_CLIC protein|glutathione S-transferase, N-terminal domain containing protein, expressed",2.6273959,null,33.99,"development.unspecified","Os01g0852900","Transcript","highly similar to ( 551) AT3G09060 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2766367-2768430 REVERSEmoderately similar to ( 275) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.3285623]
[null,26.1,"misc.cytochrome P450","Os06g0102100","Transcript","moderately similar to ( 321) AT5G06900 | Symbols: CYP93D1 | CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:2136160-2137925 REVERSEmoderately similar to ( 397) C93A1_SOYBN Cytochrome P450 93A1 (EC 1.14.-.-) - Glycine max (Soybean) p450 CypX protein|cytochrome P450, putative, expressed",6.396172,null,"21.2.1","redox.ascorbate and glutathione.ascorbate","Os04g0602100","Transcript","moderately similar to ( 409) AT4G09010 | Symbols: APX4 | APX4 (ASCORBATE PEROXIDASE 4); heme binding / peroxidase | chr4:5777502-5779338 REVERSEvery weakly similar to (81.3) APX3_ORYSA Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice)ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",2.967171,null,33.99,"development.unspecified","Os01g0864500","Transcript","very weakly similar to (94.4) AT2G35980 | Symbols: YLS9, NHL10, ATNHL10 | YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) | chr2:15110635-15111318 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",-1.860396]
[null,26.1,"misc.cytochrome P450","Os01g0544200","Transcript","weakly similar to ( 121) AT3G48270 | Symbols: CYP71A26 | CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:17876571-17878173 FORWARDweakly similar to ( 150) C71C4_MAIZE Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2) - Zea mays (Maize) protein|cytochrome P450, putative, expressed",1.9907635,null,"21.2.1.4","redox.ascorbate and glutathione.ascorbate.L-galactose dehydrogenase","Os12g0482700","Transcript","moderately similar to ( 467) AT4G33670 | Symbols: | L-galactose dehydrogenase (L-GalDH) | chr4:16169670-16171446 REVERSEvery weakly similar to (90.5) KCAB_ORYSA Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) Tas COG1453 Aldo_ket_red PRK09912 ARA1 COG4989 protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",2.2604835,null,33.99,"development.unspecified","Os01g0881300","Transcript","moderately similar to ( 240) AT1G21460 | Symbols: | nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE MtN3_slv protein|nodulin MtN3 family protein, putative, expressed",2.1036482]
[null,26.1,"misc.cytochrome P450","Os02g0503100","Transcript","moderately similar to ( 357) AT5G07990 | Symbols: TT7, CYP75B1, D501 | TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | chr5:2560437-2562859 FORWARDmoderately similar to ( 342) C75A1_PETHY Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) p450 CypX protein|cytochrome P450, putative, expressed",1.8331159,null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os03g0358100","Transcript","moderately similar to ( 264) AT2G48150 | Symbols: ATGPX4 | ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase | chr2:19688109-19689099 REVERSEmoderately similar to ( 225) GPX4_SPIOL Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Spinacia oleracea (Spinach) GSH_Peroxidase BtuE PRK10606 GSHPx protein|glutathione peroxidase domain containing protein, expressed",-1.0668083,null,33.99,"development.unspecified","Os02g0128800","Transcript","moderately similar to ( 452) AT3G58040 | Symbols: SINAT2 | SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:21489612-21491085 FORWARDweakly similar to ( 154) SINAL_DROME Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) Sina Sina protein|seven in absentia protein family domain containing protein, expressed",1.5247623]
[null,"26.11.1","misc.alcohol dehydrogenases","Os11g0210500","Transcript","highly similar to ( 622) AT1G77120 | Symbols: ADH1, ADH, ATADH, ATADH1 | ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | chr1:28975509-28977216 FORWARDhighly similar to ( 753) ADH2_ORYSA Alcohol dehydrogenase 2 (EC 1.1.1.1) - Oryza sativa (Rice) AdhC Tdh AdhP tdh PRK09422 ADH_zinc_N Qor PRK10083 ADH_N PRK10309 protein|dehydrogenase, putative, expressed",-2.2529678,null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os12g0263000","Transcript","highly similar to ( 530) AT5G27380 | Symbols: GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase | chr5:9668211-9670912 REVERSEhighly similar to ( 545) GSHB_BRAJU Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) GSH_synth_ATP eu-GS GSH_synthase protein|glutathione synthetase, chloroplast precursor, putative, expressed",2.1643085,null,33.99,"development.unspecified","Os02g0170000","Transcript","highly similar to ( 699) AT2G35130 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:14807589-14810164 REVERSEweakly similar to ( 168) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide containing protein, putative, expressed",2.769395]
[null,"26.11.1","misc.alcohol dehydrogenases","Os03g0189400","Transcript","moderately similar to ( 318) AT1G22430 | Symbols: | alcohol dehydrogenase, putative | chr1:7919235-7921594 FORWARDmoderately similar to ( 262) ADH1_PETHY Alcohol dehydrogenase 1 (EC 1.1.1.1) - Petunia hybrida (Petunia) AdhC AdhP Tdh protein|dehydrogenase, putative, expressed",-1.8898478,null,"21.2.2","redox.ascorbate and glutathione.glutathione","Os05g0129000","Transcript","highly similar to ( 792) AT4G23100 | Symbols: RML1, PAD2, GSH1, CAD2 | GSH1 (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase | chr4:12103779-12106751 REVERSEhighly similar to ( 791) GSH1_BRAJU Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) - Brassica juncea (Leaf mustard) (Indian mustard)GshA GCS2 protein|glutamate--cysteine ligase, chloroplast precursor, putative, expressed",1.2048731,null,33.3,"development.squamosa promoter binding like (SPL)","Os02g0174100","Transcript","weakly similar to ( 134) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEvery weakly similar to (95.5) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL4 - SBP-box gene family member, expressed",1.9949021]
[null,"26.11.1","misc.alcohol dehydrogenases","Os04g0630100","Transcript","weakly similar to ( 197) AT1G61720 | Symbols: BAN | BAN (BANYULS); oxidoreductase | chr1:22791326-22792757 REVERSEweakly similar to ( 156) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG protein|leucoanthocyanidin reductase, putative, expressed",3.6255887,{"$nulls":8},33.99,"development.unspecified","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613]
[null,"26.11.1","misc.alcohol dehydrogenases","Os06g0623300","Transcript","moderately similar to ( 319) AT2G33590 | Symbols: | cinnamoyl-CoA reductase family | chr2:14224622-14226365 FORWARDweakly similar to ( 189) DFRA_VITVI Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) WcaG Epimerase 3Beta_HSD protein|reductase, putative, expressed",1.040073,null,21.4,"redox.glutaredoxins","Os06g0224200","Transcript","highly similar to ( 529) AT4G08550 | Symbols: | electron carrier/ protein disulfide oxidoreductase | chr4:5444345-5446825 FORWARDDUF547 GRX_DEP protein|glutaredoxin domain containing protein, putative, expressed",-1.5925931,null,33.99,"development.unspecified","Os02g0582300","Transcript","highly similar to ( 503) AT5G65560 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:26201012-26203759 REVERSEmoderately similar to ( 270) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",-1.3830237]
[null,"26.11.1","misc.alcohol dehydrogenases","Os11g0210300","Transcript","highly similar to ( 551) AT1G77120 | Symbols: ADH1, ADH, ATADH, ATADH1 | ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | chr1:28975509-28977216 FORWARDhighly similar to ( 657) ADH1_ORYSA Alcohol dehydrogenase 1 (EC 1.1.1.1) - Oryza sativa (Rice) AdhC Tdh AdhP tdh ADH_zinc_N PRK09422 ADH_N PRK10309 Qor protein|dehydrogenase, putative, expressed",-1.0419011,null,21.4,"redox.glutaredoxins","Os04g0244400","Transcript","moderately similar to ( 374) AT5G42150 | Symbols: | electron carrier/ protein disulfide oxidoreductase | chr5:16846247-16847909 FORWARD GST_C_mPGES2 GST_N_mPGES2 protein|glutaredoxin family protein, expressed",-1.2191443,null,33.99,"development.unspecified","Os02g0594800","Transcript","moderately similar to ( 271) AT3G01600 | Symbols: anac044 | anac044 (Arabidopsis NAC domain containing protein 44); transcription factor | chr3:229365-231105 FORWARDNAM protein|no apical meristem protein, putative, expressed",1.3745664]
[null,26.12,"misc.peroxidases","Os06g0695500","Transcript","moderately similar to ( 318) AT2G18980 | Symbols: | peroxidase, putative | chr2:8233419-8235294 REVERSEweakly similar to ( 178) PER2_ARAHY Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",2.9345798,null,21.4,"redox.glutaredoxins","Os01g0194600","Transcript","very weakly similar to (88.6) AT5G11930 | Symbols: | glutaredoxin family protein | chr5:3845165-3845611 REVERSE protein|OsGrx_A2 - glutaredoxin subgroup III, expressed",-1.6271919,null,33.99,"development.unspecified","Os02g0623300","Transcript","weakly similar to ( 165) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 131) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",3.0280483]
[null,26.12,"misc.peroxidases","Os05g0134400","Transcript","weakly similar to ( 127) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 120) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",3.6408613,null,21.4,"redox.glutaredoxins","Os10g0482900","Transcript","highly similar to ( 553) AT3G11920 | Symbols: | glutaredoxin-related | chr3:3772311-3774887 FORWARDDUF547 GRX_DEP protein|glutaredoxin domain containing protein, putative, expressed",-1.1388675,null,33.99,"development.unspecified","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848]
[null,26.12,"misc.peroxidases","Os03g0368900","Transcript","moderately similar to ( 218) AT5G58390 | Symbols: | peroxidase, putative | chr5:23599755-23601244 REVERSEmoderately similar to ( 211) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",7.180881,{"$nulls":8},33.99,"development.unspecified","Os02g0734500","Transcript","weakly similar to ( 102) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",-1.1643081]
[null,26.12,"misc.peroxidases","Os02g0833900","Transcript","moderately similar to ( 334) AT5G42180 | Symbols: | peroxidase 64 (PER64) (P64) (PRXR4) | chr5:16852702-16854021 FORWARDmoderately similar to ( 228) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",3.2200165,null,21.5,"redox.peroxiredoxin","Os06g0196300","Transcript","moderately similar to ( 262) AT3G26060 | Symbols: ATPRX Q | ATPRX Q; antioxidant/ peroxiredoxin | chr3:9524807-9526123 FORWARD PRX_BCP Bcp PRX_family AhpC-TSA bcp PRX_AhpE_like Redoxin AhpC PRX_Typ2cys TlpA_like_family protein|peroxiredoxin, putative, expressed",3.1995986,null,33.99,"development.unspecified","Os02g0750400","Transcript","highly similar to ( 569) AT4G39620 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) | chr4:18395294-18397578 FORWARDweakly similar to ( 137) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.5473924]
[null,26.12,"misc.peroxidases","Os05g0135500","Transcript","moderately similar to ( 242) AT1G05260 | Symbols: RCI3, RCI3A | RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase | chr1:1529827-1531271 FORWARDmoderately similar to ( 235) PER2_ARAHY Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",9.636413,null,21.5,"redox.peroxiredoxin","Os01g0266600","Transcript","moderately similar to ( 276) AT3G06050 | Symbols: PRXIIF, ATPRXIIF | PRXIIF (PEROXIREDOXIN IIF); antioxidant/ peroxidase | chr3:1826311-1827809 REVERSE PRX5_like AHP1 Redoxin PRX_family protein|peroxiredoxin, putative, expressed",1.6453276,null,33.99,"development.unspecified","Os02g0810900","Transcript","moderately similar to ( 236) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 179) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",2.6135428]
[null,26.12,"misc.peroxidases","Os10g0109300","Transcript","moderately similar to ( 307) AT5G06720 | Symbols: | peroxidase, putative | chr5:2077567-2078857 REVERSEmoderately similar to ( 268) PERX_TOBAC Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",3.37045,null,21.5,"redox.peroxiredoxin","Os02g0192700","Transcript","moderately similar to ( 243) AT3G52960 | Symbols: | peroxiredoxin type 2, putative | chr3:19639699-19640403 FORWARD PRX5_like AHP1 Redoxin PRX_family protein|peroxiredoxin, putative, expressed",7.461029,null,33.99,"development.unspecified","Os03g0115300","Transcript","highly similar to ( 521) AT3G53170 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G48730.1); Has 17188 Blast hits to 5538 proteins in 167 species: Archae - 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants - 16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | chr3:19704729-19706417 REVERSEweakly similar to ( 131) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.1379328]
[null,26.12,"misc.peroxidases","Os07g0156200","Transcript","weakly similar to ( 194) AT4G36430 | Symbols: | peroxidase, putative | chr4:17204648-17205917 REVERSEweakly similar to ( 191) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",4.1536126,null,"21.5.1","redox.peroxiredoxin.BAS1","Os04g0416400","Transcript","moderately similar to ( 209) AT5G06290 | Symbols: 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin | chr5:1919380-1921211 FORWARDmoderately similar to ( 202) BAS1_HORVU 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) PRX_Typ2cys AhpC PRK10382 PRX_1cys protein|2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed",2.0173132,null,33.99,"development.unspecified","Os03g0151700","Transcript","highly similar to ( 990) AT3G21540 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:7586100-7590856 REVERSE Utp12 WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0246056]
[null,26.12,"misc.peroxidases","Os01g0326300","Transcript","moderately similar to ( 233) AT5G64120 | Symbols: | peroxidase, putative | chr5:25659551-25660946 REVERSEmoderately similar to ( 225) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",-1.8977785,null,"21.5.1","redox.peroxiredoxin.BAS1","Os02g0537700","Transcript","moderately similar to ( 380) AT5G06290 | Symbols: 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin | chr5:1919380-1921211 FORWARDmoderately similar to ( 379) BAS1_HORVU 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) PRX_Typ2cys AhpC PRX_1cys PRX_family PRK10382 AhpC-TSA PRX_AhpE_like Bcp PRX_BCP protein|peroxiredoxin, putative, expressed",2.2646053,null,33.99,"development.unspecified","Os03g0162900","Transcript","highly similar to ( 736) AT3G23020 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:8177215-8179743 REVERSEweakly similar to ( 159) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",4.1304536]
[null,26.12,"misc.peroxidases","Os06g0681600","Transcript","moderately similar to ( 351) AT1G05260 | Symbols: RCI3, RCI3A | RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase | chr1:1529827-1531271 FORWARDmoderately similar to ( 308) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",1.6549255,{"$nulls":8},33.99,"development.unspecified","Os03g0201400","Transcript","moderately similar to ( 466) AT2G16880 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7312262-7314493 REVERSEmoderately similar to ( 256) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.2293673]
[null,26.12,"misc.peroxidases","Os01g0962700","Transcript","moderately similar to ( 364) AT1G71695 | Symbols: | peroxidase 12 (PER12) (P12) (PRXR6) | chr1:26964359-26966557 FORWARDmoderately similar to ( 209) PER2_ORYSA Peroxidase 2 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",0.9525461,null,21.6,"redox.dismutases and catalases","Os08g0561700","Transcript","moderately similar to ( 245) AT2G28190 | Symbols: CSD2, CZSOD2 | CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); superoxide dismutase | chr2:12014548-12016303 FORWARDmoderately similar to ( 287) SODCP_ORYSA Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Oryza sativa (Rice) Sod_Cu Cu-Zn_Superoxide_Dismutase SodC protein|copper/zinc superoxide dismutase, putative, expressed",3.2064326,null,33.99,"development.unspecified","Os03g0211600","Transcript","highly similar to ( 509) AT3G29290 | Symbols: emb2076 | emb2076 (embryo defective 2076) | chr3:11238421-11240125 FORWARDweakly similar to ( 106) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.2526853]
[null,26.12,"misc.peroxidases","Os02g0236800","Transcript","moderately similar to ( 249) AT5G58390 | Symbols: | peroxidase, putative | chr5:23599755-23601244 REVERSEmoderately similar to ( 263) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",3.900514,null,21.6,"redox.dismutases and catalases","Os02g0115700","Transcript","highly similar to ( 724) AT1G20630 | Symbols: CAT1 | CAT1 (CATALASE 1); catalase | chr1:7146812-7149609 FORWARDhighly similar to ( 943) CATA1_ORYSA Catalase isozyme A (EC 1.11.1.6) (CAT-A) - Oryza sativa (Rice) catalase Catalase KatE katE protein|catalase isozyme A, putative, expressed",2.5351803,null,33.99,"development.unspecified","Os03g0222600","Transcript","moderately similar to ( 253) AT2G33380 | Symbols: RD20 | RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | chr2:14144984-14146374 REVERSECaleosin protein|caleosin related protein, putative, expressed",3.23753]
[null,26.12,"misc.peroxidases","Os12g0530100","Transcript","moderately similar to ( 248) AT2G39040 | Symbols: | peroxidase, putative | chr2:16299463-16301173 REVERSEmoderately similar to ( 220) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",3.463534,{"$nulls":8},33.99,"development.unspecified","Os03g0309800","Transcript","highly similar to ( 618) AT3G06430 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) | chr3:1956658-1958240 REVERSEweakly similar to ( 123) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR2, putative, expressed",1.8085753]
[null,26.12,"misc.peroxidases","Os07g0157600","Transcript","weakly similar to ( 162) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 157) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",5.6324897,{"$nulls":8},33.99,"development.unspecified","Os03g0327100","Transcript","moderately similar to ( 273) AT5G18270 | Symbols: ANAC087 | ANAC087; transcription factor | chr5:6041241-6042743 REVERSEmoderately similar to ( 223) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.2523727]
[null,26.12,"misc.peroxidases","Os06g0522300","Transcript","moderately similar to ( 243) AT3G50990 | Symbols: | electron carrier/ heme binding / peroxidase | chr3:18943155-18944605 FORWARDmoderately similar to ( 246) PERX_NICSY Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) - Nicotiana sylvestris (Wood tobacco)secretory_peroxidase plant_peroxidase peroxidase ascorbate_peroxidase protein|peroxidase precursor, putative, expressed",-2.3303158,{"$nulls":8},33.99,"development.unspecified","Os03g0597200","Transcript","highly similar to ( 786) AT3G53700 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest 40) | chr3:19900303-19902567 FORWARDmoderately similar to ( 303) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.4445262]
[null,26.12,"misc.peroxidases","Os01g0378100","Transcript","moderately similar to ( 265) AT5G15180 | Symbols: | peroxidase, putative | chr5:4930561-4932211 FORWARDmoderately similar to ( 255) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase plant_peroxidase peroxidase protein|peroxidase precursor, putative, expressed",2.9726746,{"$nulls":8},33.1,"development.storage proteins","Os03g0640000","Transcript","weakly similar to ( 144) AT3G54950 | Symbols: PLP7, PLA IIIA | PLA IIIA (PATATIN-LIKE PROTEIN 6) | chr3:20359076-20360774 REVERSE protein|PLA IIIA/PLP7, putative, expressed",1.5056328]
[null,26.12,"misc.peroxidases","Os01g0293900","Transcript","weakly similar to ( 198) AT4G33420 | Symbols: | peroxidase, putative | chr4:16084856-16086105 FORWARDweakly similar to ( 193) PER1_ARAHY Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",4.1536126,{"$nulls":8},33.99,"development.unspecified","Os03g0640100","Transcript","highly similar to ( 750) AT5G58230 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | chr5:23556112-23557994 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0269638]
[null,26.12,"misc.peroxidases","Os01g0294700","Transcript","weakly similar to ( 182) AT5G14130 | Symbols: | peroxidase, putative | chr5:4558862-4560028 REVERSEweakly similar to ( 174) PER1_ORYSA Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice)secretory_peroxidase peroxidase plant_peroxidase protein|peroxidase precursor, putative, expressed",7.996718,{"$nulls":8},33.99,"development.unspecified","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655]
[null,26.13,"misc.acid and other phosphatases","Os03g0238600","Transcript","moderately similar to ( 397) AT1G14700 | Symbols: PAP3, ATPAP3 | PAP3 (PURPLE ACID PHOSPHATASE 3); acid phosphatase/ protein serine/threonine phosphatase | chr1:5058680-5060988 FORWARD protein|Ser/Thr protein phosphatase family protein, putative, expressed",1.3971219,{"$nulls":8},33.99,"development.unspecified","Os03g0825700","Transcript","nearly identical (1073) AT3G09090 | Symbols: DEX1 | DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | chr3:2783165-2787552 REVERSE protein|FG-GAP repeat-containing protein, putative, expressed",-1.0877773]
[null,26.13,"misc.acid and other phosphatases","Os05g0189900","Transcript","moderately similar to ( 209) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEweakly similar to ( 187) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",7.353548,{"$nulls":8},33.2,"development.late embryogenesis abundant","Os03g0843300","Transcript","moderately similar to ( 408) AT2G44060 | Symbols: | late embryogenesis abundant family protein / LEA family protein | chr2:18226922-18227988 FORWARDvery weakly similar to (85.1) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",-0.989985]
[null,26.13,"misc.acid and other phosphatases","Os08g0531000","Transcript","highly similar to ( 837) AT5G50400 | Symbols: ATPAP27, PAP27 | PAP27 (PURPLE ACID PHOSPHATASE 27); acid phosphatase/ protein serine/threonine phosphatase | chr5:20523575-20526231 REVERSEhighly similar to ( 675) NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) protein|nucleotide pyrophosphatase/phosphodiesterase, putative, expressed",4.5972238,{"$nulls":8},33.99,"development.unspecified","Os03g0843500","Transcript","moderately similar to ( 429) AT5G17440 | Symbols: | LUC7 N_terminus domain-containing protein | chr5:5749849-5753415 FORWARD LUC7 LUC7 protein|RNA-binding protein Luc7-like, putative, expressed",1.9870229]
[null,26.13,"misc.acid and other phosphatases","Os05g0191500","Transcript","very weakly similar to (93.6) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEAcid_phosphat_B protein|acid phosphatase, putative, expressed",3.1318233,{"$nulls":8},33.99,"development.unspecified","Os04g0555000","Transcript","moderately similar to ( 259) AT4G00150 | Symbols: | scarecrow-like transcription factor 6 (SCL6) | chr4:57429-59105 REVERSEvery weakly similar to (88.6) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|scarecrow, putative, expressed",1.7134777]
[null,26.13,"misc.acid and other phosphatases","Os12g0637400","Transcript","very weakly similar to (85.9) AT2G16430 | Symbols: PAP10, ATPAP10 | PAP10 (PURPLE ACID PHOSPHATASE 10); acid phosphatase/ protein serine/threonine phosphatase | chr2:7120502-7122772 REVERSEvery weakly similar to (84.7) PPAF_SOYBN Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) protein|purple acid phosphatase precursor, putative, expressed",2.5791647,{"$nulls":8},33.99,"development.unspecified","Os04g0677700","Transcript","highly similar to ( 595) AT5G23430 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:7894073-7899862 REVERSEweakly similar to ( 110) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii WD40 COG2319 protein|katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed",2.2294672]
[null,26.13,"misc.acid and other phosphatases","Os01g0191200","Transcript","weakly similar to ( 157) AT4G29260 | Symbols: | acid phosphatase class B family protein | chr4:14422310-14423409 REVERSEweakly similar to ( 169) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",3.958133,{"$nulls":8},33.99,"development.unspecified","Os05g0145400","Transcript","moderately similar to ( 405) AT3G24440 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) | chr3:8876207-8878171 REVERSE protein|Fibronectin type III domain containing protein, expressed",-1.1132355]
[null,26.13,"misc.acid and other phosphatases","Os01g0941800","Transcript","moderately similar to ( 457) AT3G10150 | Symbols: ATPAP16, PAP16 | PAP16 (PURPLE ACID PHOSPHATASE 16); acid phosphatase/ protein serine/threonine phosphatase | chr3:3137502-3139056 REVERSE protein|Ser/Thr protein phosphatase family protein, putative, expressed",2.6106322,{"$nulls":8},33.99,"development.unspecified","Os05g0171200","Transcript","weakly similar to ( 108) AT5G62200 | Symbols: | embryo-specific protein-related | chr5:24984463-24985674 REVERSEATS3 protein|embryo-specific 3, putative, expressed",2.1845307]
[null,26.13,"misc.acid and other phosphatases","Os05g0190500","Transcript","moderately similar to ( 219) AT4G25150 | Symbols: | acid phosphatase, putative | chr4:12901736-12902882 REVERSEmoderately similar to ( 201) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",6.838286,{"$nulls":8},33.99,"development.unspecified","Os05g0275000","Transcript","highly similar to ( 819) AT2G18940 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8203873-8206341 REVERSEmoderately similar to ( 224) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.3727248]
[null,26.13,"misc.acid and other phosphatases","Os05g0191700","Transcript","weakly similar to ( 148) AT4G29260 | Symbols: | acid phosphatase class B family protein | chr4:14422310-14423409 REVERSEweakly similar to ( 144) VSPA_SOYBN Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",2.885413,{"$nulls":8},33.99,"development.unspecified","Os05g0356700","Transcript","moderately similar to ( 452) AT2G40320 | Symbols: | unknown protein | chr2:16840330-16842139 FORWARDDUF231 protein|PMR5, putative, expressed",2.0183454]
[null,26.13,"misc.acid and other phosphatases","Os07g0681200","Transcript","moderately similar to ( 203) AT2G38600 | Symbols: | acid phosphatase class B family protein | chr2:16145907-16146857 FORWARDweakly similar to ( 112) VSPB_SOYBN Stem 31 kDa glycoprotein precursor (Vegetative storage protein B) - Glycine max (Soybean)Acid_phosphat_B protein|HAD superfamily phosphatase, putative, expressed",3.1730137,{"$nulls":8},33.99,"development.unspecified","Os05g0442700","Transcript","weakly similar to ( 191) AT5G22380 | Symbols: anac090 | anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | chr5:7408924-7410038 REVERSEweakly similar to ( 116) NAC71_ORYSA NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",-1.5360001]
[null,26.13,"misc.acid and other phosphatases","Os01g0720400","Transcript","moderately similar to ( 309) AT1G73010 | Symbols: | phosphatase | chr1:27464780-27466180 REVERSE Put_Phosphatase protein|phosphoethanolamine/phosphocholine phosphatase, putative, expressed",-1.3515873,{"$nulls":8},33.99,"development.unspecified","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623]
[null,26.17,"misc.dynamin","Os03g0732200","Transcript","very weakly similar to (86.7) AT1G10290 | Symbols: ADL6, DRP2A | ADL6 (DYNAMIN-LIKE PROTEIN 6); GTPase | chr1:3370774-3377120 FORWARD protein|dynamin-2B, putative, expressed",1.28092,{"$nulls":8},33.99,"development.unspecified","Os05g0563000","Transcript","moderately similar to ( 332) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.2179844]
[null,26.19,"misc.plastocyanin-like","Os08g0482700","Transcript","very weakly similar to (82.0) AT2G32300 | Symbols: UCC1 | UCC1 (UCLACYANIN 1); copper ion binding / electron carrier | chr2:13722510-13723464 FORWARDvery weakly similar to (80.1) BCP_PEA Blue copper protein precursor - Pisum sativum (Garden pea)Cu_bind_like protein|plastocyanin-like domain containing protein, putative, expressed",-0.95478374,{"$nulls":8},33.99,"development.unspecified","Os06g0107750","Transcript","moderately similar to ( 208) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|nodulin, putative, expressed",-1.9533561]
[null,26.19,"misc.plastocyanin-like","Os06g0218600","Transcript","weakly similar to ( 106) AT1G72230 | Symbols: | plastocyanin-like domain-containing protein | chr1:27188287-27189093 FORWARDweakly similar to ( 128) BCP_PEA Blue copper protein precursor - Pisum sativum (Garden pea)Cu_bind_like protein|plastocyanin-like domain containing protein, putative, expressed",5.9294724,{"$nulls":8},33.99,"development.unspecified","Os06g0109200","Transcript","moderately similar to ( 245) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|auxin-induced protein 5NG4, putative, expressed",3.9187546]
[null,26.19,"misc.plastocyanin-like","Os12g0454600","Transcript","very weakly similar to (85.9) AT1G08500 | Symbols: | plastocyanin-like domain-containing protein | chr1:2689110-2689881 FORWARD protein|plastocyanin-like domain containing protein, putative, expressed",1.7728724,{"$nulls":8},33.99,"development.unspecified","Os06g0128400","Transcript","highly similar to ( 692) AT3G56990 | Symbols: EDA7 | EDA7 (embryo sac development arrest 7) | chr3:21088358-21091976 REVERSE protein|NUC153 domain containing protein, expressed",-1.4244264]
[null,26.19,"misc.plastocyanin-like","Os07g0112700","Transcript","very weakly similar to (89.4) AT2G27035 | Symbols: | plastocyanin-like domain-containing protein | chr2:11535670-11536251 FORWARD protein|plastocyanin-like domain containing protein, putative, expressed",-2.7452755,{"$nulls":8},33.99,"development.unspecified","Os06g0131700","Transcript","moderately similar to ( 269) AT2G46770 | Symbols: NST1, EMB2301, ANAC043 | EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | chr2:19220917-19222822 REVERSEmoderately similar to ( 224) NAC76_ORYSA NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",4.2799582]
[null,26.21,"misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein","Os10g0554800","Transcript","very weakly similar to (97.1) AT4G12510 | Symbols: | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | chr4:7417414-7417803 REVERSEvery weakly similar to (97.1) 14KD_DAUCA 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot)HPS_like protein|LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed",3.6116307,{"$nulls":8},33.99,"development.unspecified","Os06g0172000","Transcript","highly similar to ( 563) AT5G48730 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19763152-19765136 FORWARDweakly similar to ( 119) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.6701217]
[null,26.21,"misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein","Os04g0554800","Transcript","very weakly similar to (94.7) AT2G45180 | Symbols: | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | chr2:18626377-18626781 FORWARDvery weakly similar to (85.1) 14KD_DAUCA 14 kDa proline-rich protein DC2.15 precursor - Daucus carota (Carrot)HPS_like protein|LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed",6.1735973,{"$nulls":8},33.99,"development.unspecified","Os06g0254700","Transcript","moderately similar to ( 223) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",1.5088993]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os01g0227100","Transcript","highly similar to ( 637) AT4G13250 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:7684417-7686691 REVERSE DltE fabG FabG COG4221 PRK12429 fabG fabG PRK07856 fabG PRK12826 PRK12829 PRK07109 PRK07326 PRK09242 PRK08263 PRK08936 PRK06484 fabG PRK06139 fabG PRK12939 fabG PRK09072 PRK07067 PRK06346 PRK12937 PRK07825 fabG PRK06482 PRK05867 PRK08264 PRK07831 protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed",1.207028,{"$nulls":8},33.99,"development.unspecified","Os06g0273500","Transcript","moderately similar to ( 340) AT5G15890 | Symbols: | unknown protein | chr5:5187687-5189348 REVERSEDUF231 protein|expressed protein",1.3914353]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os07g0665000","Transcript","moderately similar to ( 212) AT3G26770 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr3:9845494-9847079 FORWARDweakly similar to ( 158) TS2_MAIZE Sex determination protein tasselseed-2 - Zea mays (Maize) PRK06057 fabG fabG PRK07479 PRK06172 PRK12826 PRK08324 PRK06138 PRK12429 fabG fabG PRK06346 PRK07063 PRK06841 PRK12829 FabG PRK07067 PRK08589 PRK12939 PRK07774 PRK06484 PRK07478 COG4221 fabG PRK08220 PRK06500 PRK08213 PRK07069 fabG PRK08226 fabG PRK06935 PRK06171 PRK08643 fabG PRK08265 PRK08936 fabG PRK07035 fabG PRK06200 PRK06113 PRK06398 PRK09242 fabG PRK12827 PRK06114 PRK08267 PRK12828 PRK09135 PRK07825 PRK12384 PRK07097 PRK07523 PRK08277 PRK06124 DltE PRK05717 PRK06198 PRK12824 PRK07831 PRK05650 PRK09186 PRK07074 PRK12481 PRK05855 PRK08085 PRK05872 PRK12745 PRK05875 PRK12743 PRK07060 PRK08993 PRK08628 PRK12935 fabG PRK07201 PRK07791 PRK06949 benD PRK07890 PRK07633 PRK12937 fabG PRK05867 PRK06122 PRK06523 PRK06123 PRK07814 PRK07024 fabG PRK07577 PRK12744 PRK07856 FabI PRK06179 PRK08945 PRK07326 fabG PRK06947 PRK08063 PRK12936 PRK06181 PRK06701 PRK06194 PRK06128 PRK09072 PRK05876 adh_short fabG protein|sex determination protein tasselseed-2, putative, expressed",1.6801382,{"$nulls":8},33.99,"development.unspecified","Os06g0275000","Transcript","weakly similar to ( 199) AT3G02380 | Symbols: COL2 | COL2 (constans-like 2); transcription factor/ zinc ion binding | chr3:487438-488624 REVERSECCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.0695515]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os12g0609500","Transcript","moderately similar to ( 382) AT4G20760 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:11129043-11130541 FORWARD PRK09009 PRK06953 FabG PRK08264 fabG protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed",1.5288626,{"$nulls":8},33.99,"development.unspecified","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os07g0663600","Transcript","moderately similar to ( 234) AT3G26770 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr3:9845494-9847079 FORWARDweakly similar to ( 155) TS2_MAIZE Sex determination protein tasselseed-2 - Zea mays (Maize) fabG fabG PRK06172 PRK06057 PRK12429 fabG PRK12826 PRK08324 PRK07063 PRK12829 PRK07479 PRK06138 PRK06841 PRK07067 PRK06346 FabG fabG PRK06484 PRK07478 fabG PRK12939 PRK06935 PRK07069 PRK08936 PRK08220 COG4221 fabG PRK08213 PRK07097 PRK08589 PRK08226 PRK07825 PRK08265 fabG fabG fabG PRK08643 PRK06500 PRK06114 PRK05650 PRK12828 PRK06398 PRK07774 PRK08267 fabG PRK07523 PRK12827 PRK06200 fabG PRK06171 PRK07035 PRK06124 PRK08277 DltE PRK06113 PRK12824 PRK08085 PRK05855 PRK12384 PRK08993 PRK07831 PRK05867 PRK12481 PRK08628 PRK05875 PRK06181 PRK05872 PRK07024 PRK06122 fabG PRK12935 PRK09242 PRK06949 PRK06194 PRK12745 PRK06198 PRK07060 PRK09186 PRK07890 PRK07074 PRK09135 PRK08945 PRK05717 PRK07201 PRK07633 PRK12743 PRK06128 benD PRK06523 PRK08063 PRK07814 PRK12936 PRK12937 PRK07576 PRK07791 adh_short PRK07856 fabG PRK07677 PRK07326 FabI PRK07109 PRK07577 PRK06701 PRK06179 PRK06180 fabG PRK07062 PRK07454 PRK08263 fabG PRK08278 PRK12744 PRK05876 PRK12428 PRK08416 PRK12938 fabG PRK06123 PRK07832 PRK05866 PRK06947 protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed",2.8837898,{"$nulls":8},33.99,"development.unspecified","Os06g0332800","Transcript","weakly similar to ( 112) AT3G47650 | Symbols: | bundle-sheath defective protein 2 family / bsd2 family | chr3:17569576-17570262 FORWARD protein|bundle sheath defective protein 2, putative, expressed",1.6800913]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os02g0640800","Transcript","moderately similar to ( 226) AT1G01800 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr1:293595-294888 FORWARD fabG fabG PRK12826 fabG FabG COG4221 DltE PRK12829 PRK12939 PRK12429 PRK12745 protein|oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed",2.7575276,{"$nulls":8},33.99,"development.unspecified","Os06g0572400","Transcript","moderately similar to ( 228) AT2G19580 | Symbols: TET2 | TET2 (TETRASPANIN2) | chr2:8472393-8475021 REVERSE protein|tetraspanin family protein, putative, expressed",1.5327787]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os07g0664600","Transcript","weakly similar to ( 119) AT3G26760 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr3:9843639-9844899 FORWARDvery weakly similar to (83.2) TS2_MAIZE Sex determination protein tasselseed-2 - Zea mays (Maize) fabG fabG PRK08324 PRK07479 PRK06057 COG4221 PRK12429 PRK12829 PRK12826 PRK06841 PRK06346 PRK06172 PRK06138 PRK07067 fabG PRK07063 fabG FabG PRK07774 PRK12939 PRK05650 PRK06171 PRK08267 fabG PRK06484 fabG PRK05872 PRK07478 PRK07825 PRK05855 PRK08220 PRK07069 PRK08213 PRK08589 PRK12384 PRK08265 PRK06398 PRK06113 protein|ligA, putative, expressed",3.0534332,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os06g0659100","Transcript","weakly similar to ( 151) AT1G02065 | Symbols: SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding | chr1:365625-367149 FORWARDweakly similar to ( 131) LG1_MAIZE LIGULELESS1 protein - Zea mays (Maize)SBP protein|OsSPL10 - SBP-box gene family member, expressed",-1.209332]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os10g0548000","Transcript","moderately similar to ( 310) AT4G11410 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:6945127-6947186 REVERSE PRK06196 PRK06197 PRK05854 PRK07453 FabG DltE PRK12939 COG4221 fabG fabG PRK06949 protein|short chain dehydrogenase/reductase protein, putative, expressed",2.2432687,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os06g0703500","Transcript","weakly similar to ( 169) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEweakly similar to ( 113) SBP1_ANTMA Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL12 - SBP-box gene family member, expressed",2.0117123]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os11g0181700","Transcript","weakly similar to ( 117) AT4G23430 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:12229171-12231493 FORWARD PRK06196 PRK06197 protein|short chain dehydrogenase/reductase protein, putative, expressed",3.2697775,{"$nulls":8},33.99,"development.unspecified","Os06g0708700","Transcript","moderately similar to ( 324) AT3G45870 | Symbols: | integral membrane family protein / nodulin MtN21-related | chr3:16867633-16868838 FORWARD protein|integral membrane protein, putative, expressed",2.1390414]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os07g0664500","Transcript","moderately similar to ( 202) AT3G26760 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr3:9843639-9844899 FORWARDweakly similar to ( 136) TS2_MAIZE Sex determination protein tasselseed-2 - Zea mays (Maize) fabG fabG PRK06057 PRK06172 PRK07479 PRK12429 PRK08324 PRK06138 PRK12826 PRK07063 PRK06841 fabG fabG PRK12829 PRK08589 PRK06346 FabG PRK07067 PRK07774 PRK12939 PRK07069 COG4221 PRK06484 PRK08220 PRK06500 PRK07478 fabG PRK08226 PRK08213 fabG fabG PRK06171 PRK08936 PRK08265 PRK12827 PRK06935 PRK06398 PRK08643 fabG PRK06114 PRK06113 fabG fabG fabG PRK12828 PRK07035 PRK12384 PRK08277 PRK07831 PRK07097 PRK05650 PRK09242 PRK08267 PRK05855 PRK12824 PRK06198 PRK08628 PRK07074 PRK07825 PRK07523 PRK06200 PRK06124 PRK07060 PRK05717 PRK09135 PRK08085 PRK09186 PRK05875 PRK12936 DltE PRK05872 PRK07201 PRK12935 PRK06949 PRK12745 PRK12481 PRK08993 PRK12743 PRK07791 PRK07577 PRK12937 benD fabG PRK05867 PRK06181 PRK08945 fabG PRK07856 PRK07814 PRK07024 PRK09072 PRK07633 FabI PRK06194 PRK07890 PRK07062 PRK05876 PRK06947 PRK06123 fabG PRK08063 PRK06523 PRK07576 PRK07454 PRK06122 PRK07326 PRK07109 fabG PRK12748 protein|sex determination protein tasselseed-2, putative, expressed",3.3321412,{"$nulls":8},33.99,"development.unspecified","Os06g0725000","Transcript","weakly similar to ( 160) AT4G35770 | Symbols: SEN1, ATSEN1, DIN1 | SEN1 (SENESCENCE 1) | chr4:16945073-16945964 FORWARDweakly similar to ( 157) DIN1_RAPSA Senescence-associated protein DIN1 - Raphanus sativus (Radish) RHOD RHOD protein|rhodanese-like domain containing protein, putative, expressed",3.0041504]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os04g0390800","Transcript","moderately similar to ( 209) AT5G50700 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr5:20623259-20624995 REVERSE PRK06181 DltE protein|11-beta-hydroxysteroid dehydrogenase, putative, expressed",3.4390924,{"$nulls":8},33.99,"development.unspecified","Os06g0729300","Transcript","nearly identical (1368) AT1G48410 | Symbols: AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | chr1:17886285-17891892 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|PAZ domain containing protein, putative, expressed",2.4585974]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os07g0663700","Transcript","moderately similar to ( 251) AT4G03140 | Symbols: | binding / catalytic/ oxidoreductase | chr4:1392191-1393662 FORWARDweakly similar to ( 173) TS2_MAIZE Sex determination protein tasselseed-2 - Zea mays (Maize) PRK07479 fabG fabG PRK07067 PRK12429 PRK08324 PRK06172 PRK06057 PRK06841 PRK12826 PRK12829 fabG PRK12939 PRK06138 fabG PRK07478 PRK06484 COG4221 FabG PRK06500 PRK08220 fabG PRK07063 PRK06346 PRK08265 PRK08213 PRK08643 PRK07035 PRK08226 PRK08936 PRK07825 fabG PRK06124 PRK08589 fabG PRK07069 PRK07097 fabG PRK06114 PRK06171 PRK07774 PRK06113 PRK07523 PRK06198 PRK12827 PRK05650 PRK12828 PRK08063 PRK08277 fabG fabG PRK07831 PRK12743 PRK07060 PRK07856 PRK06398 PRK05867 PRK06200 PRK12745 PRK06935 DltE PRK06949 PRK08628 PRK09186 PRK12937 PRK08267 PRK08085 PRK06128 PRK07890 fabG PRK09242 PRK05717 PRK06523 PRK06181 PRK07201 fabG PRK05872 PRK06194 fabG PRK05855 PRK07814 PRK07633 PRK07074 PRK12384 PRK08945 PRK05875 PRK12748 PRK07791 PRK07326 PRK12824 PRK12481 PRK06122 PRK12428 PRK08278 PRK09135 PRK07576 PRK08993 PRK06180 benD PRK07062 PRK07109 PRK12744 FabI adh_short PRK07677 PRK07454 PRK06179 fabG PRK06701 fabG PRK12936 PRK09134 PRK07024 PRK05876 PRK07577 protein|sex determination protein tasselseed-2, putative, expressed",2.6424472,{"$nulls":8},33.99,"development.unspecified","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715]
[null,26.22,"misc.short chain dehydrogenase/reductase (SDR)","Os06g0185100","Transcript","moderately similar to ( 223) AT4G13180 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:7657373-7658164 REVERSEweakly similar to ( 183) SDR1_PICAB Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) fabG PRK12939 PRK12937 fabG fabG FabG PRK12826 PRK12829 PRK12748 PRK12744 PRK08324 PRK06123 PRK06841 PRK08063 PRK06484 PRK07479 PRK12824 fabG fabG PRK06138 PRK12429 PRK12827 PRK08643 PRK08220 PRK07067 PRK06057 PRK07774 fabG PRK08936 PRK06172 PRK06947 PRK09135 PRK07063 PRK12743 fabG PRK08265 PRK08589 PRK07069 PRK12745 fabG PRK05875 PRK06198 PRK08277 PRK07035 PRK12828 PRK07478 PRK06128 PRK07633 fabG PRK09242 PRK06346 PRK08213 PRK06398 fabG PRK06122 PRK06701 PRK06500 PRK09134 fabG PRK06113 PRK06114 PRK06124 PRK12935 PRK07985 DltE PRK12936 PRK12384 PRK07074 PRK07060 PRK07831 PRK07890 fabG PRK09730 COG4221 PRK07677 PRK12747 PRK06935 fabG PRK07523 PRK12481 PRK06949 PRK12859 PRK08993 PRK08226 PRK07791 PRK08085 PRK08416 adh_short PRK07814 PRK07326 PRK07576 PRK07856 PRK06523 PRK09072 PRK12938 PRK09186 fabG PRK06200 PRK12746 PRK05855 PRK08628 PRK06171 PRK05872 PRK05717 benD fabG PRK08264 PRK07825 PRK07533 PRK05650 PRK07062 PRK08945 PRK07577 PRK12742 PRK07097 PRK07370 PRK07109 PRK07454 FabI fabG protein|versicolorin reductase, putative, expressed",1.2009751,{"$nulls":8},33.99,"development.unspecified","Os07g0525100","Transcript","moderately similar to ( 236) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.456244]
[null,26.23,"misc.rhodanese","Os09g0530000","Transcript","moderately similar to ( 262) AT4G27700 | Symbols: | rhodanese-like domain-containing protein | chr4:13826541-13827673 REVERSE protein|rhodanese-like domain containing protein, putative, expressed",4.1350513,{"$nulls":8},33.99,"development.unspecified","Os07g0548300","Transcript","moderately similar to ( 494) AT5G42310 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16915860-16918238 FORWARDweakly similar to ( 189) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",2.0732763]
[null,26.23,"misc.rhodanese","Os02g0596000","Transcript","moderately similar to ( 291) AT4G24750 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: rhodanese-like domain-containing protein (TAIR:AT3G08920.1); Has 222 Blast hits to 222 proteins in 59 species: Archae - 8; Bacteria - 82; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr4:12758422-12760749 REVERSE protein|rhodanese family protein, putative, expressed",2.685313,{"$nulls":8},33.99,"development.unspecified","Os07g0604700","Transcript","weakly similar to ( 117) AT3G29970 | Symbols: | germination protein-related | chr3:11745299-11746481 FORWARDB12D protein|B12D protein, putative, expressed",-1.6997224]
[null,26.23,"misc.rhodanese","Os02g0257400","Transcript","moderately similar to ( 239) AT4G01050 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:455874-458175 FORWARD protein|expressed protein",4.6157756,{"$nulls":8},33.99,"development.unspecified","Os07g0671200","Transcript","moderately similar to ( 377) AT2G32630 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13844834-13846708 FORWARDmoderately similar to ( 220) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.2524633]
[null,26.23,"misc.rhodanese","Os01g0889800","Transcript","weakly similar to ( 184) AT3G25480 | Symbols: | rhodanese-like domain-containing protein | chr3:9235591-9236598 REVERSE protein|rhodanese-like, putative, expressed",1.9734086,{"$nulls":8},33.99,"development.unspecified","Os08g0191900","Transcript","highly similar to ( 670) AT3G59040 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:21821495-21824233 REVERSEweakly similar to ( 138) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.335797]
[null,26.23,"misc.rhodanese","Os02g0729400","Transcript","moderately similar to ( 280) AT5G23060 | Symbols: CaS | CaS (Calcium sensing receptor) | chr5:7736760-7738412 REVERSE protein|arsenate reductase, putative, expressed",2.62098,{"$nulls":8},33.99,"development.unspecified","Os08g0535800","Transcript","weakly similar to ( 102) AT5G13180 | Symbols: ANAC083 | ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | chr5:4196643-4197577 FORWARDvery weakly similar to (89.0) NAC68_ORYSA NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.5443617]
[null,26.23,"misc.rhodanese","Os01g0896500","Transcript","moderately similar to ( 360) AT3G59780 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; BEST Arabidopsis thaliana protein match is: CaS (Calcium sensing receptor) (TAIR:AT5G23060.1); Has 1338 Blast hits to 316 proteins in 95 species: Archae - 0; Bacteria - 274; Metazoa - 264; Fungi - 88; Plants - 42; Viruses - 4; Other Eukaryotes - 666 (source: NCBI BLink). | chr3:22087345-22090324 FORWARD protein|rhodanese-like domain containing protein, putative, expressed",1.7604771,{"$nulls":8},33.99,"development.unspecified","Os08g0562200","Transcript","moderately similar to ( 229) AT3G10500 | Symbols: anac053 | anac053 (Arabidopsis NAC domain containing protein 53); transcription factor | chr3:3271718-3273887 FORWARDweakly similar to ( 160) NAC74_ORYSA NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-0.9606611]
[null,26.23,"misc.rhodanese","Os09g0279400","Transcript","moderately similar to ( 281) AT2G42220 | Symbols: | rhodanese-like domain-containing protein | chr2:17592105-17593305 FORWARD protein|rhodanese-like, putative, expressed",1.9373388,{"$nulls":8},33.99,"development.unspecified","Os09g0423300","Transcript","highly similar to ( 878) AT4G30825 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:15009605-15012319 FORWARDweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",3.2283523]
[null,26.23,"misc.rhodanese","Os03g0861700","Transcript","moderately similar to ( 360) AT1G17850 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: rhodanese-like domain-containing protein (TAIR:AT2G40760.1); Has 3833 Blast hits to 3832 proteins in 847 species: Archae - 0; Bacteria - 1695; Metazoa - 46; Fungi - 2; Plants - 52; Viruses - 0; Other Eukaryotes - 2038 (source: NCBI BLink). | chr1:6146470-6148820 REVERSEPRK00142 COG1054 RHOD_YceA PRK05320 PRK01415 protein|rhodanese-like domain containing protein, putative, expressed",1.8775845,{"$nulls":8},33.99,"development.unspecified","Os09g0536700","Transcript","moderately similar to ( 287) AT4G34950 | Symbols: | nodulin family protein | chr4:16642544-16644759 REVERSENodulin-like protein|nodulin, putative, expressed",-1.097448]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os02g0717700","Transcript","very weakly similar to (95.9) AT5G15770 | Symbols: AtGNA1 | AtGNA1 (Arabidopsis thaliana glucose-6-phosphate acetyltransferase 1); N-acetyltransferase/ glucosamine 6-phosphate N-acetyltransferase | chr5:5144093-5144542 REVERSE protein|acetyltransferase, GNAT family, putative, expressed",-1.3834342,{"$nulls":8},33.99,"development.unspecified","Os10g0181200","Transcript","highly similar to ( 808) AT4G34830 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2745 (EMBRYO DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 19818 Blast hits to 5849 proteins in 171 species: Archae - 3; Bacteria - 16; Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0; Other Eukaryotes - 1100 (source: NCBI BLink). | chr4:16599976-16605994 REVERSEweakly similar to ( 126) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.3580487]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os08g0102000","Transcript","weakly similar to ( 164) AT1G26220 | Symbols: | GCN5-related N-acetyltransferase (GNAT) family protein | chr1:9071157-9071750 FORWARD protein|acetyltransferase, GNAT family, putative, expressed",2.6119964,{"$nulls":8},33.99,"development.unspecified","Os10g0421800","Transcript","nearly identical (1080) AT4G31850 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) | chr4:15403020-15406358 FORWARDmoderately similar to ( 251) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.4434547]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os05g0481000","Transcript","moderately similar to ( 268) AT1G32070 | Symbols: ATNSI | ATNSI (NUCLEAR SHUTTLE INTERACTING); N-acetyltransferase | chr1:11534851-11536289 REVERSE protein|acetyltransferase, GNAT family, putative, expressed",1.9932986,{"$nulls":8},33.99,"development.unspecified","Os10g0422600","Transcript","very weakly similar to (81.3) AT2G25690 | Symbols: | senescence-associated protein-related | chr2:10940530-10941649 REVERSE protein|DUF581 domain containing protein, expressed",2.5280125]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os04g0465500","Transcript","weakly similar to ( 167) AT1G24040 | Symbols: | GCN5-related N-acetyltransferase (GNAT) family protein | chr1:8505794-8506753 REVERSE protein|acetyltransferase, GNAT family, putative, expressed",2.743817,{"$nulls":8},33.99,"development.unspecified","Os10g0465000","Transcript","moderately similar to ( 229) AT5G43920 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17673397-17675630 FORWARD WD40 protein|WD repeat-containing protein, putative, expressed",1.2224302]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os03g0205800","Transcript","weakly similar to ( 191) AT2G23060 | Symbols: | GCN5-related N-acetyltransferase (GNAT) family protein | chr2:9812839-9814199 REVERSE protein|HLS, putative, expressed",2.130954,{"$nulls":8},33.99,"development.unspecified","Os10g0477600","Transcript","moderately similar to ( 237) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 177) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",1.9038072]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os08g0260000","Transcript","weakly similar to ( 128) AT4G28030 | Symbols: | GCN5-related N-acetyltransferase (GNAT) family protein | chr4:13937748-13939131 REVERSE protein|acetyltransferase, GNAT family, putative, expressed",1.1621246,{"$nulls":8},33.99,"development.unspecified","Os11g0149400","Transcript","very weakly similar to (98.6) PSK2_ORYSA Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] - Oryza sativa (Rice) protein|phytosulfokines precursor, putative, expressed",2.3102272]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os12g0111900","Transcript","weakly similar to ( 128) AT2G30330 | Symbols: | GCN5L1 family protein | chr2:12929045-12929688 REVERSE protein|expressed protein",2.7431157,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os11g0496600","Transcript","weakly similar to ( 135) AT5G50570 | Symbols: | squamosa promoter-binding protein, putative | chr5:20582555-20583791 REVERSEweakly similar to ( 112) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL19 - SBP-box gene family member, expressed",1.261798]
[null,26.24,"misc.GCN5-related N-acetyltransferase","Os03g0794200","Transcript","weakly similar to ( 165) AT2G32030 | Symbols: | GCN5-related N-acetyltransferase (GNAT) family protein | chr2:13632675-13633241 REVERSERimL protein|acetyltransferase, GNAT family, putative, expressed",-1.0171695,{"$nulls":8},33.99,"development.unspecified","Os11g0705200","Transcript","moderately similar to ( 419) AT2G37650 | Symbols: | scarecrow-like transcription factor 9 (SCL9) | chr2:15792623-15794779 FORWARDweakly similar to ( 187) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|GRAS family transcription factor domain containing protein, expressed",-1.414639]
[null,"26.26.1","misc.aminotransferases.aminotransferase class IV family protein","Os02g0273100","Transcript","moderately similar to ( 417) AT5G57850 | Symbols: | aminotransferase class IV family protein | chr5:23435548-23437287 REVERSE PLPDE_IV ADCL_like D-AAT_like PRK06680 IlvE PRK08320 Aminotran_4 PRK12479 BCAT_beta_family PRK06606 protein|aminotransferase domain containing protein, putative, expressed",1.4167501,{"$nulls":8},33.99,"development.unspecified","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023]
[null,"26.26.1","misc.aminotransferases.aminotransferase class IV family protein","Os01g0238500","Transcript","moderately similar to ( 329) AT5G57850 | Symbols: | aminotransferase class IV family protein | chr5:23435548-23437287 REVERSE ADCL_like PLPDE_IV D-AAT_like IlvE PRK06680 PRK08320 Aminotran_4 PRK07849 protein|ligA, putative, expressed",2.4488654,{"$nulls":8},33.99,"development.unspecified","Os12g0178633","Transcript","moderately similar to ( 423) AT5G54200 | Symbols: | WD-40 repeat family protein | chr5:21993565-21997076 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.3121089]
[null,26.28,"misc.GDSL-motif lipase","Os06g0351500","Transcript","weakly similar to ( 181) AT1G75880 | Symbols: | family II extracellular lipase 1 (EXL1) | chr1:28490564-28492298 FORWARDweakly similar to ( 149) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.257059,{"$nulls":8},33.99,"development.unspecified","Os12g0510900","Transcript","moderately similar to ( 293) AT1G10200 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc ion binding | chr1:3346677-3347763 REVERSEmoderately similar to ( 248) SF3_HELAN Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed",3.5731878]
[null,26.28,"misc.GDSL-motif lipase","Os04g0507700","Transcript","moderately similar to ( 480) AT3G04290 | Symbols: ATLTL1, LTL1 | LTL1 (LI-TOLERANT LIPASE 1); carboxylesterase/ hydrolase, acting on ester bonds | chr3:1133620-1136223 REVERSEweakly similar to ( 154) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.9769448]
[null,26.28,"misc.GDSL-motif lipase","Os01g0649900","Transcript","weakly similar to ( 174) AT1G28590 | Symbols: | lipase, putative | chr1:10047509-10049300 REVERSEvery weakly similar to (96.3) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.853714,{"$nulls":8},33.99,"development.unspecified","Os01g0117900","Transcript","moderately similar to ( 381) AT3G18200 | Symbols: | nodulin MtN21 family protein | chr3:6234509-6235531 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3783941]
[null,26.28,"misc.GDSL-motif lipase","Os06g0156600","Transcript","moderately similar to ( 292) AT5G45910 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:18620420-18622264 REVERSEweakly similar to ( 162) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.786473,{"$nulls":8},33.99,"development.unspecified","Os01g0208000","Transcript","moderately similar to ( 247) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.9492868]
[null,26.28,"misc.GDSL-motif lipase","Os07g0642200","Transcript","moderately similar to ( 270) AT1G28600 | Symbols: | lipase, putative | chr1:10051604-10053073 REVERSEweakly similar to ( 152) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.014493,{"$nulls":8},33.99,"development.unspecified","Os01g0217000","Transcript","moderately similar to ( 385) AT1G29050 | Symbols: | unknown protein | chr1:10136376-10139082 REVERSEDUF231 protein|powdery mildew resistant protein 5, putative, expressed",1.8833987]
[null,26.28,"misc.GDSL-motif lipase","Os02g0101400","Transcript","moderately similar to ( 298) AT1G75900 | Symbols: | family II extracellular lipase 3 (EXL3) | chr1:28499179-28500943 FORWARDweakly similar to ( 186) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.2243428,{"$nulls":8},33.2,"development.late embryogenesis abundant","Os01g0225600","Transcript","weakly similar to ( 183) AT1G01470 | Symbols: LEA14, LSR3 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | chr1:172295-172826 REVERSEmoderately similar to ( 206) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",1.7882758]
[null,26.28,"misc.GDSL-motif lipase","Os01g0827700","Transcript","moderately similar to ( 324) AT1G58430 | Symbols: RXF26 | RXF26; carboxylesterase/ hydrolase, acting on ester bonds | chr1:21711684-21712992 REVERSEmoderately similar to ( 204) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 Triacylglycerol_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.7648027,{"$nulls":8},33.99,"development.unspecified","Os01g0254100","Transcript","nearly identical (1576) AT3G16830 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) | chr3:5731709-5737531 FORWARD WD40 COG2319 protein|lissencephaly type-1-like homology motif, putative, expressed",-1.1587647]
[null,26.28,"misc.GDSL-motif lipase","Os03g0683800","Transcript","moderately similar to ( 367) AT5G03810 | Symbols: | carboxylesterase/ hydrolase, acting on ester bonds / lipase | chr5:1013939-1015345 REVERSEweakly similar to ( 194) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.9708408,{"$nulls":8},33.2,"development.late embryogenesis abundant","Os01g0574800","Transcript","Hin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.6755605]
[null,26.28,"misc.GDSL-motif lipase","Os06g0725200","Transcript","weakly similar to ( 154) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 103) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.7445822,{"$nulls":8},33.99,"development.unspecified","Os01g0672100","Transcript","moderately similar to ( 351) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.7783573,{"$nulls":3},"LOC_Os06g03682.2"]
[null,26.28,"misc.GDSL-motif lipase","Os01g0215500","Transcript","moderately similar to ( 220) AT2G27360 | Symbols: | lipase, putative | chr2:11706233-11707905 FORWARDweakly similar to ( 124) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",-1.176582,{"$nulls":8},33.99,"development.unspecified","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854,{"$nulls":3},"LOC_Os06g07560.1","Os06g0172200"]
[null,26.28,"misc.GDSL-motif lipase","Os03g0581400","Transcript","moderately similar to ( 202) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 120) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",5.1556945,{"$nulls":8},33.99,"development.unspecified","Os01g0776400","Transcript","highly similar to ( 520) AT2G16405 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:7105915-7108787 REVERSE WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9476285,{"$nulls":3},"LOC_Os06g35160.1","Os06g0543400"]
[null,26.28,"misc.GDSL-motif lipase","Os05g0419800","Transcript","moderately similar to ( 428) AT1G71691 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:26949395-26951173 REVERSEweakly similar to ( 148) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 Triacylglycerol_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.8321915,{"$nulls":8},33.99,"development.unspecified","Os01g0803300","Transcript","moderately similar to ( 417) AT5G07050 | Symbols: | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). | chr5:2191533-2193416 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3495276,{"$nulls":3},"LOC_Os06g40200.1","Os06g0604500"]
[null,26.28,"misc.GDSL-motif lipase","Os04g0577300","Transcript","moderately similar to ( 208) AT5G41890 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:16764292-16766900 REVERSESGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.2343721,{"$nulls":8},33.99,"development.unspecified","Os01g0823500","Transcript","weakly similar to ( 102) AT1G06920 | Symbols: ATOFP4, OFP4 | OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4) | chr1:2124854-2125801 REVERSEDUF623 protein|DUF623 domain containing protein, expressed",2.3226073,{"$nulls":3},"LOC_Os06g40200.2"]
[null,26.28,"misc.GDSL-motif lipase","Os06g0148200","Transcript","moderately similar to ( 429) AT3G16370 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:5556928-5558351 FORWARDweakly similar to ( 185) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.028175,{"$nulls":8},33.99,"development.unspecified","Os01g0826900","Transcript","highly similar to ( 783) AT3G56140 | Symbols: | unknown protein | chr3:20829407-20832669 FORWARDDUF399 protein|expressed protein",1.6502084,{"$nulls":3},"LOC_Os06g40370.1","Os06g0606000"]
[null,26.28,"misc.GDSL-motif lipase","Os02g0740400","Transcript","weakly similar to ( 116) AT1G71250 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:26860125-26861582 FORWARDSGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.21175,{"$nulls":8},33.99,"development.unspecified","Os01g0833000","Transcript","highly similar to ( 560) AT5G39980 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16001036-16003072 REVERSEweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.97713,{"$nulls":3},"LOC_Os06g47640.1","Os06g0691600"]
[null,26.28,"misc.GDSL-motif lipase","Os01g0214600","Transcript","moderately similar to ( 298) AT5G45910 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:18620420-18622264 REVERSEweakly similar to ( 150) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",2.436472,{"$nulls":8},33.99,"development.unspecified","Os01g0852900","Transcript","highly similar to ( 551) AT3G09060 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2766367-2768430 REVERSEmoderately similar to ( 275) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.3285623,{"$nulls":3},"LOC_Os06g50030.1","Os06g0714200"]
[null,26.28,"misc.GDSL-motif lipase","Os01g0650200","Transcript","moderately similar to ( 218) AT1G28600 | Symbols: | lipase, putative | chr1:10051604-10053073 REVERSEweakly similar to ( 108) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",-1.3373656,{"$nulls":8},33.99,"development.unspecified","Os01g0864500","Transcript","very weakly similar to (94.4) AT2G35980 | Symbols: YLS9, NHL10, ATNHL10 | YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) | chr2:15110635-15111318 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",-1.860396,{"$nulls":3},"LOC_Os06g50146.1","Os06g0715400"]
[null,26.28,"misc.GDSL-motif lipase","Os02g0669000","Transcript","weakly similar to ( 191) AT5G55050 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr5:22337745-22339741 FORWARDweakly similar to ( 135) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like COG3240 protein|GDSL-like lipase/acylhydrolase, putative, expressed",1.3259596,{"$nulls":8},33.99,"development.unspecified","Os01g0881300","Transcript","moderately similar to ( 240) AT1G21460 | Symbols: | nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE MtN3_slv protein|nodulin MtN3 family protein, putative, expressed",2.1036482,{"$nulls":3},"LOC_Os07g05620.1","Os07g0150700"]
[null,26.28,"misc.GDSL-motif lipase","Os07g0586200","Transcript","moderately similar to ( 258) AT3G26430 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:9674419-9675889 FORWARDmoderately similar to ( 202) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.156663,{"$nulls":8},33.99,"development.unspecified","Os02g0128800","Transcript","moderately similar to ( 452) AT3G58040 | Symbols: SINAT2 | SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:21489612-21491085 FORWARDweakly similar to ( 154) SINAL_DROME Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) Sina Sina protein|seven in absentia protein family domain containing protein, expressed",1.5247623,{"$nulls":3},"LOC_Os07g05620.2"]
[null,26.28,"misc.GDSL-motif lipase","Os06g0149100","Transcript","weakly similar to ( 168) AT3G16370 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr3:5556928-5558351 FORWARDvery weakly similar to (95.5) APG_BRANA Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",4.7206635,{"$nulls":8},33.99,"development.unspecified","Os02g0170000","Transcript","highly similar to ( 699) AT2G35130 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:14807589-14810164 REVERSEweakly similar to ( 168) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide containing protein, putative, expressed",2.769395,{"$nulls":3},"LOC_Os07g06740.1","Os07g0161600"]
[null,26.28,"misc.GDSL-motif lipase","Os01g0329900","Transcript","moderately similar to ( 378) AT1G09390 | Symbols: | GDSL-motif lipase/hydrolase family protein | chr1:3031264-3033415 FORWARDmoderately similar to ( 243) EST_HEVBR Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree)SGNH_plant_lipase_like fatty_acyltransferase_like protein|GDSL-like lipase/acylhydrolase, putative, expressed",3.9643126,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os02g0174100","Transcript","weakly similar to ( 134) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEvery weakly similar to (95.5) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL4 - SBP-box gene family member, expressed",1.9949021,{"$nulls":3},"LOC_Os07g06740.2"]
[null,26.3,"misc. other Ferredoxins and Rieske domain","Os03g0685000","Transcript","moderately similar to ( 208) AT1G32550 | Symbols: | ferredoxin family protein | chr1:11771969-11774117 REVERSE protein|2Fe-2S iron-sulfur cluster binding domain containing protein, expressed",1.8466314,{"$nulls":8},33.99,"development.unspecified","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613,{"$nulls":3},"LOC_Os07g06740.3"]
[{"$nulls":15},33.99,"development.unspecified","Os02g0582300","Transcript","highly similar to ( 503) AT5G65560 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:26201012-26203759 REVERSEmoderately similar to ( 270) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",-1.3830237,{"$nulls":3},"LOC_Os07g09610.1","Os07g0194100"]
[null,27.1,"RNA.processing","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927,{"$nulls":8},33.99,"development.unspecified","Os02g0594800","Transcript","moderately similar to ( 271) AT3G01600 | Symbols: anac044 | anac044 (Arabidopsis NAC domain containing protein 44); transcription factor | chr3:229365-231105 FORWARDNAM protein|no apical meristem protein, putative, expressed",1.3745664,{"$nulls":3},"LOC_Os07g22710.1","Os07g0409900"]
[null,27.1,"RNA.processing","Os01g0184000","Transcript","moderately similar to ( 354) AT5G11010 | Symbols: | pre-mRNA cleavage complex-related | chr5:3484176-3486067 FORWARD NUC156 COG1341 protein|expressed protein",-0.98764485,{"$nulls":8},33.99,"development.unspecified","Os02g0623300","Transcript","weakly similar to ( 165) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 131) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",3.0280483,{"$nulls":3},"LOC_Os07g22710.2"]
[null,27.1,"RNA.processing","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584,{"$nulls":8},33.99,"development.unspecified","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848,{"$nulls":3},"LOC_Os07g22710.3"]
[null,27.1,"RNA.processing","Os12g0102600","Transcript","highly similar to ( 560) AT3G09650 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040 FORWARDweakly similar to ( 134) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|HCF152, putative, expressed",2.2363338,{"$nulls":8},33.99,"development.unspecified","Os02g0734500","Transcript","weakly similar to ( 102) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",-1.1643081,{"$nulls":3},"LOC_Os07g22710.4"]
[null,27.1,"RNA.processing","Os03g0314400","Transcript","moderately similar to ( 349) AT2G13600 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:5671493-5673586 FORWARDvery weakly similar to (95.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.3869253,{"$nulls":8},33.99,"development.unspecified","Os02g0750400","Transcript","highly similar to ( 569) AT4G39620 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) | chr4:18395294-18397578 FORWARDweakly similar to ( 137) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.5473924,{"$nulls":3},"LOC_Os07g33110.1","Os07g0515100"]
[null,27.1,"RNA.processing","Os01g0354700","Transcript","moderately similar to ( 296) AT5G11010 | Symbols: | pre-mRNA cleavage complex-related | chr5:3484176-3486067 FORWARD NUC156 COG1341 protein|expressed protein",2.0876644,{"$nulls":8},33.99,"development.unspecified","Os02g0810900","Transcript","moderately similar to ( 236) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 179) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",2.6135428,{"$nulls":3},"LOC_Os07g33110.2"]
[null,27.1,"RNA.processing","Os07g0688500","Transcript","moderately similar to ( 403) AT3G06560 | Symbols: | polynucleotide adenylyltransferase/ protein binding | chr3:2044443-2047034 FORWARD PAP_central PAP1 protein|expressed protein",-1.3581719,{"$nulls":8},33.99,"development.unspecified","Os03g0115300","Transcript","highly similar to ( 521) AT3G53170 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G48730.1); Has 17188 Blast hits to 5538 proteins in 167 species: Archae - 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants - 16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | chr3:19704729-19706417 REVERSEweakly similar to ( 131) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.1379328,{"$nulls":3},"LOC_Os07g33110.3"]
[null,27.1,"RNA.processing","Os10g0183900","Transcript","moderately similar to ( 434) AT2G47420 | Symbols: | dimethyladenosine transferase, putative | chr2:19457574-19458777 FORWARD KsgA ksgA rADc RrnaAD protein|dimethyladenosine transferase, putative, expressed",-0.9462512,{"$nulls":8},33.99,"development.unspecified","Os03g0151700","Transcript","highly similar to ( 990) AT3G21540 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:7586100-7590856 REVERSE Utp12 WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0246056,{"$nulls":3},"LOC_Os07g33110.4"]
[null,27.1,"RNA.processing","Os06g0137600","Transcript","moderately similar to ( 212) AT4G34730 | Symbols: | ribosome-binding factor A family protein | chr4:16570019-16571274 REVERSErbfA RbfA RBFA protein|ribosome-binding factor A, chloroplast precursor, putative, expressed",1.001351,{"$nulls":8},33.99,"development.unspecified","Os03g0162900","Transcript","highly similar to ( 736) AT3G23020 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:8177215-8179743 REVERSEweakly similar to ( 159) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",4.1304536,{"$nulls":3},"LOC_Os07g33110.5"]
[null,27.1,"RNA.processing","Os12g0156400","Transcript","moderately similar to ( 271) AT1G08370 | Symbols: DCP1, ATDCP1 | DCP1 (decapping 1); m7G(5')pppN diphosphatase/ protein homodimerization | chr1:2638355-2640367 FORWARD DCP1 protein|mRNA-decapping enzyme, putative, expressed",-1.3301319,{"$nulls":8},33.99,"development.unspecified","Os03g0201400","Transcript","moderately similar to ( 466) AT2G16880 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7312262-7314493 REVERSEmoderately similar to ( 256) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.2293673,{"$nulls":3},"LOC_Os07g38120.1","Os07g0568600"]
[null,27.1,"RNA.processing","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677,{"$nulls":8},33.99,"development.unspecified","Os03g0211600","Transcript","highly similar to ( 509) AT3G29290 | Symbols: emb2076 | emb2076 (embryo defective 2076) | chr3:11238421-11240125 FORWARDweakly similar to ( 106) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.2526853,{"$nulls":3},"LOC_Os07g39630.1","Os07g0585100"]
[null,27.1,"RNA.processing","Os03g0833700","Transcript","moderately similar to ( 417) AT5G22100 | Symbols: | RNA cyclase family protein | chr5:7329015-7330718 FORWARD RNA_Cyclase_Class_I RTC RNA_Cyclase RCL1 RNA_Cyclase_Class_II PRK04204 RTC_insert EPT_RTPC-like protein|RNA 3-terminal phosphate cyclase, putative, expressed",-1.1080414,{"$nulls":8},33.99,"development.unspecified","Os03g0222600","Transcript","moderately similar to ( 253) AT2G33380 | Symbols: RD20 | RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | chr2:14144984-14146374 REVERSECaleosin protein|caleosin related protein, putative, expressed",3.23753,{"$nulls":3},"LOC_Os07g42770.1","Os07g0619800"]
[null,27.1,"RNA.processing","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848,{"$nulls":8},33.99,"development.unspecified","Os03g0309800","Transcript","highly similar to ( 618) AT3G06430 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) | chr3:1956658-1958240 REVERSEweakly similar to ( 123) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR2, putative, expressed",1.8085753,{"$nulls":3},"LOC_Os07g42940.1","Os07g0622000"]
[null,27.1,"RNA.processing","Os08g0278750","Transcript","protein|expressed protein",1.5307689,{"$nulls":8},33.99,"development.unspecified","Os03g0327100","Transcript","moderately similar to ( 273) AT5G18270 | Symbols: ANAC087 | ANAC087; transcription factor | chr5:6041241-6042743 REVERSEmoderately similar to ( 223) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.2523727,{"$nulls":3},"LOC_Os07g42940.2"]
[null,27.1,"RNA.processing","Os02g0757900","Transcript","moderately similar to ( 217) AT5G10350 | Symbols: | polyadenylate-binding protein family protein / PABP family protein | chr5:3255674-3257746 REVERSE protein|RNA recognition motif containing protein, putative, expressed",-1.0344414,{"$nulls":8},33.99,"development.unspecified","Os03g0597200","Transcript","highly similar to ( 786) AT3G53700 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest 40) | chr3:19900303-19902567 FORWARDmoderately similar to ( 303) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.4445262,{"$nulls":3},"LOC_Os07g42940.3"]
[null,27.1,"RNA.processing","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579,{"$nulls":8},33.1,"development.storage proteins","Os03g0640000","Transcript","weakly similar to ( 144) AT3G54950 | Symbols: PLP7, PLA IIIA | PLA IIIA (PATATIN-LIKE PROTEIN 6) | chr3:20359076-20360774 REVERSE protein|PLA IIIA/PLP7, putative, expressed",1.5056328,{"$nulls":3},"LOC_Os07g42940.4"]
[null,27.1,"RNA.processing","Os09g0570600","Transcript","weakly similar to ( 192) AT3G45750 | Symbols: | unknown protein | chr3:16793855-16797380 REVERSE protein|expressed protein",-1.0293239,{"$nulls":8},33.99,"development.unspecified","Os03g0640100","Transcript","highly similar to ( 750) AT5G58230 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | chr5:23556112-23557994 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0269638,{"$nulls":3},"LOC_Os07g42940.5"]
[null,27.1,"RNA.processing","Os08g0506500","Transcript","moderately similar to ( 285) AT5G26880 | Symbols: | tRNA/rRNA methyltransferase (SpoU) family protein | chr5:9457950-9459190 REVERSECspR PRK10358 SpoU_methylase protein|RNA methyltransferase, TrmH family protein, putative, expressed",1.0707711,{"$nulls":8},33.99,"development.unspecified","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655,{"$nulls":3},"LOC_Os07g42940.6"]
[null,27.1,"RNA.processing","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292,{"$nulls":8},33.99,"development.unspecified","Os03g0825700","Transcript","nearly identical (1073) AT3G09090 | Symbols: DEX1 | DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | chr3:2783165-2787552 REVERSE protein|FG-GAP repeat-containing protein, putative, expressed",-1.0877773,{"$nulls":3},"LOC_Os07g42940.7"]
[null,27.1,"RNA.processing","Os11g0103000","Transcript","highly similar to ( 579) AT3G09650 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040 FORWARDweakly similar to ( 139) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|HCF152, putative, expressed",2.168548,{"$nulls":8},33.2,"development.late embryogenesis abundant","Os03g0843300","Transcript","moderately similar to ( 408) AT2G44060 | Symbols: | late embryogenesis abundant family protein / LEA family protein | chr2:18226922-18227988 FORWARDvery weakly similar to (85.1) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",-0.989985,{"$nulls":3},"LOC_Os07g42940.8"]
[null,"27.1.1","RNA.processing.splicing","Os01g0956600","Transcript","moderately similar to ( 202) AT2G33440 | Symbols: | splicing factor family protein | chr2:14170790-14173226 FORWARD protein|RNA recognition motif containing protein, putative, expressed",3.3051078,{"$nulls":8},33.99,"development.unspecified","Os03g0843500","Transcript","moderately similar to ( 429) AT5G17440 | Symbols: | LUC7 N_terminus domain-containing protein | chr5:5749849-5753415 FORWARD LUC7 LUC7 protein|RNA-binding protein Luc7-like, putative, expressed",1.9870229,{"$nulls":3},"LOC_Os07g42940.9"]
[null,"27.1.1","RNA.processing.splicing","Os11g0704700","Transcript","very weakly similar to (92.0) AT3G55460 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid binding / nucleotide binding | chr3:20561024-20563502 FORWARDRRM_1 RRM protein|RNA recognition motif containing protein, expressed",-1.0936791,{"$nulls":8},33.99,"development.unspecified","Os04g0555000","Transcript","moderately similar to ( 259) AT4G00150 | Symbols: | scarecrow-like transcription factor 6 (SCL6) | chr4:57429-59105 REVERSEvery weakly similar to (88.6) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|scarecrow, putative, expressed",1.7134777,{"$nulls":3},"LOC_Os07g44290.1","Os07g0637000"]
[null,"27.1.1","RNA.processing.splicing","Os05g0120100","Transcript","weakly similar to ( 199) AT2G37340 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding | chr2:15670372-15672331 REVERSE protein|splicing factor, arginine/serine-rich 7, putative, expressed",-0.9787833,{"$nulls":8},33.99,"development.unspecified","Os04g0677700","Transcript","highly similar to ( 595) AT5G23430 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:7894073-7899862 REVERSEweakly similar to ( 110) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii WD40 COG2319 protein|katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed",2.2294672,{"$nulls":3},"LOC_Os07g44710.1","Os07g0641200"]
[null,"27.1.1","RNA.processing.splicing","Os07g0633200","Transcript","weakly similar to ( 118) AT1G55310 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding / protein binding | chr1:20630676-20632567 FORWARD protein|RNA recognition motif containing protein, putative, expressed",-1.363359,{"$nulls":8},33.99,"development.unspecified","Os05g0145400","Transcript","moderately similar to ( 405) AT3G24440 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) | chr3:8876207-8878171 REVERSE protein|Fibronectin type III domain containing protein, expressed",-1.1132355,{"$nulls":3},"LOC_Os07g48090.1","Os07g0678300"]
[null,"27.1.2","RNA.processing.RNA helicase","Os09g0520700","Transcript","highly similar to ( 697) AT5G62190 | Symbols: PRH75 | PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding | chr5:24980542-24983879 REVERSEhighly similar to ( 708) RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) SrmB PRK11776 PRK04837 PRK11192 PRK04537 PRK11634 DEADc PRK10590 PRK01297 DEAD DEXDc GUCT DEXDc HELICc COG1205 Lhr Helicase_C COG1202 HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase 7, putative, expressed",-1.5360321,{"$nulls":8},33.99,"development.unspecified","Os05g0171200","Transcript","weakly similar to ( 108) AT5G62200 | Symbols: | embryo-specific protein-related | chr5:24984463-24985674 REVERSEATS3 protein|embryo-specific 3, putative, expressed",2.1845307,{"$nulls":3},"LOC_Os07g48100.1","Os07g0678600"]
[null,"27.1.2","RNA.processing.RNA helicase","Os06g0697200","Transcript","highly similar to ( 789) AT5G51280 | Symbols: | DEAD-box protein abstrakt, putative | chr5:20841456-20843645 FORWARDmoderately similar to ( 239) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 DEADc PRK11192 PRK04837 PRK01297 PRK11634 PRK04537 DEAD DEXDc HELICc DEXDc Lhr Helicase_C HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-2.5212672,{"$nulls":8},33.99,"development.unspecified","Os05g0275000","Transcript","highly similar to ( 819) AT2G18940 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8203873-8206341 REVERSEmoderately similar to ( 224) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.3727248,{"$nulls":3},"LOC_Os07g48340.1","Os07g0681400"]
[null,"27.1.2","RNA.processing.RNA helicase","Os06g0343100","Transcript","nearly identical (1471) AT3G26560 | Symbols: | ATP-dependent RNA helicase, putative | chr3:9750122-9753719 REVERSE HrpA PRK11131 PRK11664 DEXHc DUF1605 HA2 DEXDc DEXDc protein|pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed",-1.0580597,{"$nulls":8},33.99,"development.unspecified","Os05g0356700","Transcript","moderately similar to ( 452) AT2G40320 | Symbols: | unknown protein | chr2:16840330-16842139 FORWARDDUF231 protein|PMR5, putative, expressed",2.0183454,{"$nulls":3},"LOC_Os07g48340.2"]
[null,"27.1.2","RNA.processing.RNA helicase","Os03g0827700","Transcript","highly similar to ( 827) AT5G26742 | Symbols: emb1138 | emb1138 (embryo defective 1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/ nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSEmoderately similar to ( 333) RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) SrmB PRK11776 PRK11192 PRK11634 PRK10590 PRK04837 PRK01297 DEADc PRK04537 DEAD DEXDc DEXDc HELICc GUCT Lhr COG1205 Helicase_C SSL2 HELICc RecQ COG1202 COG1204 protein|DEAD-box ATP-dependent RNA helicase 3, putative, expressed",2.5551713,{"$nulls":8},33.99,"development.unspecified","Os05g0442700","Transcript","weakly similar to ( 191) AT5G22380 | Symbols: anac090 | anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | chr5:7408924-7410038 REVERSEweakly similar to ( 116) NAC71_ORYSA NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",-1.5360001,{"$nulls":3},"LOC_Os07g48760.1","Os07g0687000"]
[null,"27.1.19","RNA.processing.ribonucleases","Os11g0237700","Transcript","weakly similar to ( 175) AT1G55140 | Symbols: | RNA binding / ribonuclease III | chr1:20572788-20574332 REVERSECOG1939 protein|RNA binding protein, putative, expressed",1.082571,{"$nulls":8},33.99,"development.unspecified","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623,{"$nulls":3},"LOC_Os08g02420.1","Os08g0117400"]
[null,"27.1.19","RNA.processing.ribonucleases","Os01g0551100","Transcript","RIBOc rnc Rnc RIBOc Ribonuclease_3 protein|ribonuclease III domain protein, putative, expressed",-1.6171036,{"$nulls":8},33.99,"development.unspecified","Os05g0563000","Transcript","moderately similar to ( 332) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.2179844,{"$nulls":3},"LOC_Os08g04890.1","Os08g0144100"]
[null,"27.1.19","RNA.processing.ribonucleases","Os09g0537700","Transcript","weakly similar to ( 167) AT1G26820 | Symbols: RNS3 | RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 | chr1:9292760-9293722 REVERSEvery weakly similar to (84.0) RN28_PANGI Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) RNase_T2_euk RNase_T2 Ribonuclease_T2 protein|ribonuclease T2 family domain containing protein, expressed",3.1804707,{"$nulls":8},33.99,"development.unspecified","Os06g0107750","Transcript","moderately similar to ( 208) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|nodulin, putative, expressed",-1.9533561,{"$nulls":3},"LOC_Os08g34240.1","Os08g0441100"]
[null,"27.1.19","RNA.processing.ribonucleases","Os08g0440300","Transcript","moderately similar to ( 369) AT2G32070 | Symbols: | CCR4-NOT transcription complex protein, putative | chr2:13640829-13641656 REVERSE CAF1 POP2 protein|CAF1 family ribonuclease containing protein, putative, expressed",-1.3003114,{"$nulls":8},33.99,"development.unspecified","Os06g0109200","Transcript","moderately similar to ( 245) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|auxin-induced protein 5NG4, putative, expressed",3.9187546,{"$nulls":3},"LOC_Os08g37800.1","Os08g0484600"]
[null,"27.1.19","RNA.processing.ribonucleases","Os01g0897300","Transcript","moderately similar to ( 238) AT2G39780 | Symbols: RNS2 | RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | chr2:16591256-16593515 FORWARD RNase_T2_euk Ribonuclease_T2 RNase_T2 RNase_T2_prok Rna protein|ribonuclease T2 family domain containing protein, expressed",3.5020783,{"$nulls":8},33.99,"development.unspecified","Os06g0128400","Transcript","highly similar to ( 692) AT3G56990 | Symbols: EDA7 | EDA7 (embryo sac development arrest 7) | chr3:21088358-21091976 REVERSE protein|NUC153 domain containing protein, expressed",-1.4244264,{"$nulls":3},"LOC_Os08g40530.1","Os08g0517200"]
[null,"27.1.19","RNA.processing.ribonucleases","Os01g0810100","Transcript","highly similar to ( 758) AT4G37510 | Symbols: | ribonuclease III family protein | chr4:17626259-17628854 REVERSERIBOc RIBOc protein|chloroplast ribonuclease III domain protein, putative, expressed",1.515437,{"$nulls":8},33.99,"development.unspecified","Os06g0131700","Transcript","moderately similar to ( 269) AT2G46770 | Symbols: NST1, EMB2301, ANAC043 | EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | chr2:19220917-19222822 REVERSEmoderately similar to ( 224) NAC76_ORYSA NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",4.2799582,{"$nulls":3},"LOC_Os08g40530.2"]
[null,"27.1.19","RNA.processing.ribonucleases","Os09g0538000","Transcript","weakly similar to ( 133) AT1G14220 | Symbols: | ribonuclease T2 family protein | chr1:4858642-4859601 REVERSE RNase_T2_euk Ribonuclease_T2 RNase_T2 protein|ribonuclease T2 family domain containing protein, expressed",8.038064,{"$nulls":8},33.99,"development.unspecified","Os06g0172000","Transcript","highly similar to ( 563) AT5G48730 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19763152-19765136 FORWARDweakly similar to ( 119) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.6701217,{"$nulls":3},"LOC_Os08g42750.1","Os08g0540400"]
[null,27.2,"RNA.transcription","Os12g0134300","Transcript","weakly similar to ( 135) AT1G03280 | Symbols: | transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein | chr1:803635-806758 FORWARD protein|transcription initiation factor, putative, expressed",-1.8095843,{"$nulls":8},33.99,"development.unspecified","Os06g0254700","Transcript","moderately similar to ( 223) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",1.5088993,{"$nulls":3},"LOC_Os09g25090.1","Os09g0418000"]
[null,27.2,"RNA.transcription","Os08g0202300","Transcript","weakly similar to ( 137) ATMG00860 | Symbols: ORF158 | hypothetical protein | chrM:235916-236392 FORWARDweakly similar to ( 126) RRPO_OENBE RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Bertero's evening primrose)RT_LTR RVT_1 RT_ZFREV_like RT_Rtv protein|retrotransposon protein, putative, unclassified, expressed",-1.620855,{"$nulls":8},33.99,"development.unspecified","Os06g0273500","Transcript","moderately similar to ( 340) AT5G15890 | Symbols: | unknown protein | chr5:5187687-5189348 REVERSEDUF231 protein|expressed protein",1.3914353,{"$nulls":3},"LOC_Os09g25100.1","Os09g0418500"]
[null,27.2,"RNA.transcription","Os11g0448400","Transcript","moderately similar to ( 356) AT1G08540 | Symbols: SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2 | SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr1:2703461-2706696 FORWARDPRK07406 PRK05901 RpoD PRK09210 PRK07598 PRK07405 PRK07921 PRK05949 PRK05658 PRK05657 rpoH2 FliA PRK06596 fliA PRK06288 PRK05803 PRK07670 PRK08215 PRK05572 PRK08301 protein|RNA polymerase sigma factor, putative, expressed",1.1997461,{"$nulls":8},33.99,"development.unspecified","Os06g0275000","Transcript","weakly similar to ( 199) AT3G02380 | Symbols: COL2 | COL2 (constans-like 2); transcription factor/ zinc ion binding | chr3:487438-488624 REVERSECCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.0695515,{"$nulls":3},"LOC_Os09g25110.1"]
[null,27.2,"RNA.transcription","Os05g0586600","Transcript","moderately similar to ( 308) AT5G24120 | Symbols: SIGE, SIG5, ATSIG5 | SIGE (SIGMA FACTOR E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr5:8157794-8159746 REVERSEPRK05949 PRK07405 PRK07406 RpoD PRK05901 PRK07598 PRK05657 PRK09210 PRK05658 protein|RNA polymerase sigma factor, putative, expressed",1.5925454,{"$nulls":8},33.99,"development.unspecified","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677,{"$nulls":3},"LOC_Os09g29170.1","Os09g0466900"]
[null,27.2,"RNA.transcription","Os03g0646800","Transcript","highly similar to ( 759) AT4G21710 | Symbols: NRPB2, EMB1989, RPB2 | NRPB2; DNA binding / DNA-directed RNA polymerase | chr4:11535684-11542200 REVERSEweakly similar to ( 161) RPOB_MESVI DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride RNA_pol_B_RPB2 PRK08565 PRK07225 RpoB RNA_pol_Rpb2_6 rpoB rpoB RNA_pol_Rpb2_7 PRK09603 protein|DNA-directed RNA polymerase II subunit RPB2, putative, expressed",-1.8766861,{"$nulls":8},33.99,"development.unspecified","Os06g0332800","Transcript","weakly similar to ( 112) AT3G47650 | Symbols: | bundle-sheath defective protein 2 family / bsd2 family | chr3:17569576-17570262 FORWARD protein|bundle sheath defective protein 2, putative, expressed",1.6800913,{"$nulls":3},"LOC_Os09g29170.2"]
[null,27.2,"RNA.transcription","Os02g0639700","Transcript","weakly similar to ( 180) AT3G15390 | Symbols: SDE5 | SDE5 (silencing defective 5) | chr3:5196689-5199531 REVERSE protein|DUF1771 domain containing protein, putative, expressed",-0.997987,{"$nulls":8},33.99,"development.unspecified","Os06g0572400","Transcript","moderately similar to ( 228) AT2G19580 | Symbols: TET2 | TET2 (TETRASPANIN2) | chr2:8472393-8475021 REVERSE protein|tetraspanin family protein, putative, expressed",1.5327787,{"$nulls":3},"LOC_Os09g29170.3"]
[null,27.2,"RNA.transcription","Os05g0589200","Transcript","very weakly similar to (84.0) AT3G53920 | Symbols: SIGC, SIG3 | SIGC (RNA POLYMERASE SIGMA-SUBUNIT C); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr3:19961041-19963820 REVERSE protein|RNA polymerase sigma factor, putative, expressed",3.289567,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os06g0659100","Transcript","weakly similar to ( 151) AT1G02065 | Symbols: SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding | chr1:365625-367149 FORWARDweakly similar to ( 131) LG1_MAIZE LIGULELESS1 protein - Zea mays (Maize)SBP protein|OsSPL10 - SBP-box gene family member, expressed",-1.209332,{"$nulls":3},"LOC_Os09g29170.4"]
[null,27.2,"RNA.transcription","Os04g0487300","Transcript","weakly similar to ( 189) AT3G22320 | Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | NRPB5; DNA binding / DNA-directed RNA polymerase | chr3:7891045-7892094 REVERSE RNA_pol_Rpb5_N protein|DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed",-1.2585107,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os06g0703500","Transcript","weakly similar to ( 169) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEweakly similar to ( 113) SBP1_ANTMA Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL12 - SBP-box gene family member, expressed",2.0117123,{"$nulls":3},"LOC_Os09g33910.1","Os09g0514200"]
[null,27.2,"RNA.transcription","Os02g0654400","Transcript","moderately similar to ( 238) AT5G43130 | Symbols: TAF4, TAF4B | TAF4 (TBP-ASSOCIATED FACTOR 4); transcription initiation factor | chr5:17315608-17321144 REVERSETAF4 protein|transcription initiation factor, putative, expressed",-0.97860146,{"$nulls":8},33.99,"development.unspecified","Os06g0708700","Transcript","moderately similar to ( 324) AT3G45870 | Symbols: | integral membrane family protein / nodulin MtN21-related | chr3:16867633-16868838 FORWARD protein|integral membrane protein, putative, expressed",2.1390414,{"$nulls":3},"LOC_Os10g06950.1","Os10g0157400"]
[null,27.3,"RNA.regulation of transcription","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584,{"$nulls":8},33.99,"development.unspecified","Os06g0725000","Transcript","weakly similar to ( 160) AT4G35770 | Symbols: SEN1, ATSEN1, DIN1 | SEN1 (SENESCENCE 1) | chr4:16945073-16945964 FORWARDweakly similar to ( 157) DIN1_RAPSA Senescence-associated protein DIN1 - Raphanus sativus (Radish) RHOD RHOD protein|rhodanese-like domain containing protein, putative, expressed",3.0041504,{"$nulls":3},"LOC_Os10g25010.1","Os10g0389000"]
[null,27.3,"RNA.regulation of transcription","Os08g0107800","Transcript","moderately similar to ( 286) AT1G62910 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:23299060-23303162 FORWARDhighly similar to ( 786) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|Rf1, mitochondrial precursor, putative, expressed",-1.7094434,{"$nulls":8},33.99,"development.unspecified","Os06g0729300","Transcript","nearly identical (1368) AT1G48410 | Symbols: AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | chr1:17886285-17891892 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|PAZ domain containing protein, putative, expressed",2.4585974,{"$nulls":3},"LOC_Os10g28240.1","Os10g0418100"]
[null,"27.3.1","RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family","Os02g0683500","Transcript","moderately similar to ( 202) AT1G01030 | Symbols: NGA3 | NGA3 (NGATHA3); transcription factor | chr1:11864-12940 REVERSEB3 protein|B3 DNA binding domain containing protein, expressed",-1.3406903,{"$nulls":8},33.99,"development.unspecified","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715,{"$nulls":3},"LOC_Os10g30070.1","Os10g0436900"]
[null,"27.3.2","RNA.regulation of transcription.Alfin-like","Os07g0233300","Transcript","moderately similar to ( 295) AT5G05610 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding | chr5:1677331-1678942 REVERSE protein|PHD finger protein, putative, expressed",-1.0386173,{"$nulls":8},33.99,"development.unspecified","Os07g0525100","Transcript","moderately similar to ( 236) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.456244,{"$nulls":3},"LOC_Os10g36710.1","Os10g0510700"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os10g0371100","Transcript","weakly similar to ( 109) AT1G78080 | Symbols: RAP2.4 | RAP2.4 (related to AP2 4); DNA binding / transcription factor | chr1:29364790-29365794 FORWARDAP2 AP2 protein|ethylene-responsive transcription factor, putative, expressed",1.6778313,{"$nulls":8},33.99,"development.unspecified","Os07g0548300","Transcript","moderately similar to ( 494) AT5G42310 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16915860-16918238 FORWARDweakly similar to ( 189) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",2.0732763,{"$nulls":3},"LOC_Os10g39420.1","Os10g0539600"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108,{"$nulls":8},33.99,"development.unspecified","Os07g0604700","Transcript","weakly similar to ( 117) AT3G29970 | Symbols: | germination protein-related | chr3:11745299-11746481 FORWARDB12D protein|B12D protein, putative, expressed",-1.6997224,{"$nulls":3},"LOC_Os10g41490.1","Os10g0564500"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0341000","Transcript","very weakly similar to (80.1) AT1G72360 | Symbols: | ethylene-responsive element-binding protein, putative | chr1:27241904-27242777 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.8170595,{"$nulls":8},33.99,"development.unspecified","Os07g0671200","Transcript","moderately similar to ( 377) AT2G32630 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13844834-13846708 FORWARDmoderately similar to ( 220) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.2524633,{"$nulls":3},"LOC_Os10g41490.2"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os01g0165000","Transcript","weakly similar to ( 124) AT2G40340 | Symbols: | AP2 domain-containing transcription factor, putative (DRE2B) | chr2:16848665-16850357 REVERSEAP2 AP2 protein|AP2 domain containing protein, expressed",-0.9488856,{"$nulls":8},33.99,"development.unspecified","Os08g0191900","Transcript","highly similar to ( 670) AT3G59040 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:21821495-21824233 REVERSEweakly similar to ( 138) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.335797,{"$nulls":3},"LOC_Os10g41490.3"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057,{"$nulls":8},33.99,"development.unspecified","Os08g0535800","Transcript","weakly similar to ( 102) AT5G13180 | Symbols: ANAC083 | ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | chr5:4196643-4197577 FORWARDvery weakly similar to (89.0) NAC68_ORYSA NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.5443617,{"$nulls":3},"LOC_Os11g01390.1","Os11g0105000"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0657000","Transcript","weakly similar to ( 132) AT2G44940 | Symbols: | AP2 domain-containing transcription factor TINY, putative | chr2:18537294-18538181 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",4.613399,{"$nulls":8},33.99,"development.unspecified","Os08g0562200","Transcript","moderately similar to ( 229) AT3G10500 | Symbols: anac053 | anac053 (Arabidopsis NAC domain containing protein 53); transcription factor | chr3:3271718-3273887 FORWARDweakly similar to ( 160) NAC74_ORYSA NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-0.9606611,{"$nulls":3},"LOC_Os11g01580.1","Os11g0107266"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os09g0518900","Transcript","moderately similar to ( 245) AT1G01180 | Symbols: | unknown protein | chr1:75633-77446 FORWARD protein|expressed protein",2.819342,{"$nulls":8},33.99,"development.unspecified","Os09g0423300","Transcript","highly similar to ( 878) AT4G30825 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:15009605-15012319 FORWARDweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",3.2283523,{"$nulls":3},"LOC_Os11g02240.1","Os11g0113700"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0346200","Transcript","very weakly similar to (92.8) AT5G05410 | Symbols: DREB2A, DREB2 | DREB2A; DNA binding / transcription activator/ transcription factor | chr5:1602650-1603657 FORWARDAP2 AP2 protein|AP2 domain containing protein, expressed",-1.1557907,{"$nulls":8},33.99,"development.unspecified","Os09g0536700","Transcript","moderately similar to ( 287) AT4G34950 | Symbols: | nodulin family protein | chr4:16642544-16644759 REVERSENodulin-like protein|nodulin, putative, expressed",-1.097448,{"$nulls":3},"LOC_Os11g03970.1","Os11g0134232"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os03g0818800","Transcript","moderately similar to ( 256) AT4G36920 | Symbols: AP2, FLO2, FL1 | AP2 (APETALA 2); transcription factor | chr4:17400998-17403140 FORWARDweakly similar to ( 151) BBM1_BRANA Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape)AP2 protein|AP2 domain containing protein, expressed",-1.0689335,{"$nulls":8},33.99,"development.unspecified","Os10g0181200","Transcript","highly similar to ( 808) AT4G34830 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2745 (EMBRYO DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 19818 Blast hits to 5849 proteins in 171 species: Archae - 3; Bacteria - 16; Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0; Other Eukaryotes - 1100 (source: NCBI BLink). | chr4:16599976-16605994 REVERSEweakly similar to ( 126) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.3580487,{"$nulls":3},"LOC_Os11g03970.2"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os05g0389000","Transcript","weakly similar to ( 137) AT2G41710 | Symbols: | ovule development protein, putative | chr2:17400274-17402903 REVERSE protein|AP2 domain containing protein, expressed",2.0078347,{"$nulls":8},33.99,"development.unspecified","Os10g0421800","Transcript","nearly identical (1080) AT4G31850 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) | chr4:15403020-15406358 FORWARDmoderately similar to ( 251) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.4434547,{"$nulls":3},"LOC_Os11g03970.1","Os11g0134300"]
[null,"27.3.3","RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696,{"$nulls":8},33.99,"development.unspecified","Os10g0422600","Transcript","very weakly similar to (81.3) AT2G25690 | Symbols: | senescence-associated protein-related | chr2:10940530-10941649 REVERSE protein|DUF581 domain containing protein, expressed",2.5280125,{"$nulls":3},"LOC_Os11g03970.2"]
[null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0753500","Transcript","moderately similar to ( 450) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.6797137,{"$nulls":8},33.99,"development.unspecified","Os10g0465000","Transcript","moderately similar to ( 229) AT5G43920 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17673397-17675630 FORWARD WD40 protein|WD repeat-containing protein, putative, expressed",1.2224302,{"$nulls":3},"LOC_Os11g03980.1","Os11g0134400"]
[null,"27.3.4","RNA.regulation of transcription.ARF, Auxin Response Factor family","Os01g0670800","Transcript","moderately similar to ( 480) AT2G33860 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / transcription factor | chr2:14325444-14328613 REVERSEAuxin_resp B3 protein|auxin response factor, putative, expressed",1.0322542,{"$nulls":8},33.99,"development.unspecified","Os10g0477600","Transcript","moderately similar to ( 237) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 177) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",1.9038072,{"$nulls":3},"LOC_Os11g04170.1","Os11g0136600"]
[null,"27.3.5","RNA.regulation of transcription.ARR","Os02g0182100","Transcript","moderately similar to ( 321) AT2G25180 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/ two-component response regulator | chr2:10724490-10726961 REVERSEvery weakly similar to (84.3) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)AtoC REC REC Response_reg OmpR CheY COG4753 protein|two-component response regulator, putative, expressed",-1.0548993,{"$nulls":8},33.99,"development.unspecified","Os11g0149400","Transcript","very weakly similar to (98.6) PSK2_ORYSA Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] - Oryza sativa (Rice) protein|phytosulfokines precursor, putative, expressed",2.3102272,{"$nulls":3},"LOC_Os11g04460.1","Os11g0140400"]
[null,"27.3.5","RNA.regulation of transcription.ARR","Os11g0143300","Transcript","moderately similar to ( 201) AT3G57040 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator | chr3:21110059-21111228 FORWARDREC REC protein|OsRR10 type-A response regulator, expressed",-1.0985559,{"$nulls":8},33.3,"development.squamosa promoter binding like (SPL)","Os11g0496600","Transcript","weakly similar to ( 135) AT5G50570 | Symbols: | squamosa promoter-binding protein, putative | chr5:20582555-20583791 REVERSEweakly similar to ( 112) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL19 - SBP-box gene family member, expressed",1.261798,{"$nulls":3},"LOC_Os11g05070.1","Os11g0148000"]
[null,"27.3.5","RNA.regulation of transcription.ARR","Os04g0442300","Transcript","weakly similar to ( 125) AT1G59940 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator | chr1:22065894-22066895 REVERSEREC REC AtoC Response_reg CheY PleD protein|OsRR1 type-A response regulator, expressed",1.9674207,{"$nulls":8},33.99,"development.unspecified","Os11g0705200","Transcript","moderately similar to ( 419) AT2G37650 | Symbols: | scarecrow-like transcription factor 9 (SCL9) | chr2:15792623-15794779 FORWARDweakly similar to ( 187) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|GRAS family transcription factor domain containing protein, expressed",-1.414639,{"$nulls":3},"LOC_Os11g07040.1","Os11g0171500"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0915600","Transcript","weakly similar to ( 178) AT3G07340 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:2341188-2343288 REVERSE protein|BHLH transcription factor, putative, expressed",1.1191101,{"$nulls":8},33.99,"development.unspecified","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023,{"$nulls":3},"LOC_Os11g37550.1","Os11g0586200"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os08g0524800","Transcript","weakly similar to ( 160) AT5G48560 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:19684160-19686871 FORWARD protein|BHLH transcription factor, putative, expressed",1.7823194,{"$nulls":8},33.99,"development.unspecified","Os12g0178633","Transcript","moderately similar to ( 423) AT5G54200 | Symbols: | WD-40 repeat family protein | chr5:21993565-21997076 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.3121089,{"$nulls":3},"LOC_Os11g43860.1","Os11g0660000"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0135700","Transcript","weakly similar to ( 199) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|BHLH transcription factor, putative, expressed",2.1326425,{"$nulls":8},33.99,"development.unspecified","Os12g0510900","Transcript","moderately similar to ( 293) AT1G10200 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc ion binding | chr1:3346677-3347763 REVERSEmoderately similar to ( 248) SF3_HELAN Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed",3.5731878,{"$nulls":3},"LOC_Os11g43860.2"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0691500","Transcript","weakly similar to ( 182) AT1G72210 | Symbols: | basic helix-loop-helix (bHLH) family protein (bHLH096) | chr1:27180066-27182268 FORWARD protein|helix-loop-helix DNA-binding protein, putative, expressed",3.364888,{"$nulls":17},"LOC_Os12g01400.1","Os12g0104900"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os01g0952800","Transcript","weakly similar to ( 111) AT3G56970 | Symbols: BHLH038, ORG2 | BHLH038; DNA binding / transcription factor | chr3:21084204-21085094 REVERSE protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.7507919,{"$nulls":8},"17.1.1","hormone metabolism.abscisic acid.synthesis-degradation","Os03g0250200","Transcript","moderately similar to ( 220) AT1G75700 | Symbols: HVA22G | HVA22G (HVA22-LIKE PROTEIN G) | chr1:28423956-28424931 FORWARD TB2_DP1_HVA22 protein|HVA22, putative, expressed",3.818896,{"$nulls":3},"LOC_Os12g02200.1","Os12g0113500"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os09g0510500","Transcript","weakly similar to ( 126) AT5G50915 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr5:20710764-20712252 REVERSE protein|BEE 1, putative, expressed",3.5891144,{"$nulls":8},"17.1.1.1.10","hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase","Os02g0704000","Transcript","highly similar to ( 605) AT4G19170 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD RPE65 COG3670 protein|9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed",-2.4485574,{"$nulls":3},"LOC_Os12g02200.2"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os07g0549600","Transcript","very weakly similar to (87.0) AT2G16910 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA binding / transcription factor | chr2:7331721-7334077 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",1.4914767,{"$nulls":8},"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os11g0498600","Transcript","weakly similar to ( 150) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 160) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 YOP1 protein|HVA22, putative, expressed",2.6062984,{"$nulls":3},"LOC_Os12g03810.1","Os12g0132200"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os05g0139100","Transcript","weakly similar to ( 113) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",2.685197,{"$nulls":8},"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os04g0527000","Transcript","weakly similar to ( 183) AT5G08350 | Symbols: | GRAM domain-containing protein / ABA-responsive protein-related | chr5:2686417-2687175 REVERSE protein|GEM, putative, expressed",1.1323467,{"$nulls":3},"LOC_Os12g03810.2"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os02g0603600","Transcript","weakly similar to ( 151) AT1G05805 | Symbols: | basic helix-loop-helix (bHLH) family protein | chr1:1744843-1747427 FORWARD protein|helix-loop-helix DNA-binding domain containing protein, expressed",-1.372179,{"$nulls":8},"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os09g0450600","Transcript","weakly similar to ( 102) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 114) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 protein|HVA22, putative, expressed",1.2709488,{"$nulls":3},"LOC_Os12g03810.3"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os03g0782500","Transcript","weakly similar to ( 104) AT1G09530 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator | chr1:3077216-3079367 FORWARD protein|phytochrome-interacting factor 4, putative, expressed",1.688983,{"$nulls":8},"17.2.2","hormone metabolism.auxin.signal transduction","Os01g0919800","Transcript","moderately similar to ( 351) AT5G16530 | Symbols: PIN5 | PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter | chr5:5400735-5402626 FORWARDhighly similar to ( 506) PIN6_ORYSA Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice)Mem_trans protein|auxin efflux carrier component, putative, expressed",-2.1748767,{"$nulls":3},"LOC_Os12g03816.1","Os12g0132300"]
[null,"27.3.6","RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family","Os10g0544200","Transcript","weakly similar to ( 172) AT5G65640 | Symbols: bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor | chr5:26237137-26238635 FORWARD protein|inducer of CBF expression 2, putative, expressed",3.7744904,{"$nulls":8},"17.2.2","hormone metabolism.auxin.signal transduction","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767,{"$nulls":3},"LOC_Os12g03970.1","Os12g0133500"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0731700","Transcript","weakly similar to ( 173) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.7829956,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os04g0337500","Transcript","moderately similar to ( 484) AT1G60730 | Symbols: | aldo/keto reductase family protein | chr1:22358613-22360082 REVERSEmoderately similar to ( 451) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 PRK10376 PRK09912 COG4989 PRK10625 COG1453 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",6.735754,{"$nulls":3},"LOC_Os12g04220.1","Os12g0136900"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0536300","Transcript","very weakly similar to (94.4) AT2G33500 | Symbols: | zinc finger (B-box type) family protein | chr2:14188159-14190046 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",1.903288,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os09g0546900","Transcript","very weakly similar to (99.4) AT5G27780 | Symbols: | auxin-responsive family protein | chr5:9838885-9839313 REVERSE protein|OsSAUR53 - Auxin-responsive SAUR gene family member, expressed",1.039621,{"$nulls":3},"LOC_Os12g07230.1","Os12g0169800"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0148000","Transcript","weakly similar to ( 115) AT5G57180 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator | chr5:23168393-23169523 FORWARD protein|CCT motif family protein, expressed",6.6167235,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0556400","Transcript","moderately similar to ( 307) AT3G61750 | Symbols: | auxin-responsive protein -related | chr3:22857897-22859254 REVERSE B561 protein|auxin-responsive protein, putative, expressed",5.386839,{"$nulls":3},"LOC_Os12g12730.1","Os12g0228800"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os08g0428400","Transcript","protein|ZIM motif family protein, expressed",1.5630218,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os10g0510500","Transcript","very weakly similar to (85.9) AT2G46690 | Symbols: | auxin-responsive family protein | chr2:19180904-19181269 FORWARD protein|CPuORF40 - conserved peptide uORF-containing transcript, expressed",-1.1871086,{"$nulls":3},"LOC_Os12g12860.1","Os12g0230200"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os06g0499500","Transcript","highly similar to ( 564) AT1G28130 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido synthetase | chr1:9826379-9827883 FORWARDnearly identical (1191) GH37_ORYSA Probable indole-3-acetic acid-amido synthetase GH3.7 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 7) (OsGH3-7) - Oryza sativa (Rice)GH3 protein|OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed",1.0032129,{"$nulls":3},"LOC_Os12g30150.1","Os12g0486600"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0264200","Transcript","weakly similar to ( 191) AT1G25440 | Symbols: | zinc finger (B-box type) family protein | chr1:8933939-8935284 REVERSE protein|CCT/B-box zinc finger protein, putative, expressed",2.6492913,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194900","Transcript","moderately similar to ( 357) AT3G25290 | Symbols: | auxin-responsive family protein | chr3:9208955-9210353 FORWARD B561 DUF568 protein|membrane protein, putative, expressed",-1.1955652,{"$nulls":3},"LOC_Os12g39630.1","Os12g0586100"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os06g0713000","Transcript","weakly similar to ( 137) AT1G75540 | Symbols: STH2 | STH2 (SALT TOLERANCE HOMOLOG2); transcription factor/ zinc ion binding | chr1:28366059-28367398 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7561938,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os01g0618100","Transcript","moderately similar to ( 394) AT1G60690 | Symbols: | aldo/keto reductase family protein | chr1:22349892-22351668 REVERSEmoderately similar to ( 372) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 COG4989 PRK10376 COG1453 PRK09912 PRK10625 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",1.3380041,{"$nulls":3},"LOC_Os12g39660.1","Os12g0586600"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os03g0711100","Transcript","weakly similar to ( 135) AT1G73870 | Symbols: | zinc finger (B-box type) family protein | chr1:27779214-27780522 FORWARD protein|CCT/B-box zinc finger protein, putative, expressed",2.263133,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194600","Transcript","weakly similar to ( 102) AT5G48750 | Symbols: | auxin-responsive protein, putative | chr5:19770052-19770819 REVERSE DUF568 protein|AIR12, putative, expressed",-2.172973,{"$nulls":3},"LOC_Os12g41090.1","Os12g0603700"]
[null,"27.3.7","RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family","Os05g0204600","Transcript","weakly similar to ( 140) AT1G78600 | Symbols: LZF1, STH3 | LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding | chr1:29567370-29568662 FORWARD protein|B-box zinc finger family protein, putative, expressed",1.7392745,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os07g0475700","Transcript","protein|OsSAUR30 - Auxin-responsive SAUR gene family member, expressed",1.9867239,{"$nulls":3},"LOC_Os12g41110.1","Os12g0603800"]
[null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os03g0764900","Transcript","weakly similar to ( 110) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDvery weakly similar to (95.5) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-2.1698039,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0437200","Transcript","moderately similar to ( 260) AT1G43130 | Symbols: LCV2 | LCV2 (LIKE COV 2) | chr1:16228661-16231158 REVERSEDUF502 COG2928 protein|protein of unknown function DUF502 domain containing protein, expressed",-1.0361265,{"$nulls":3},"LOC_Os12g42910.1","Os12g0624200"]
[null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0673700","Transcript","weakly similar to ( 145) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 118) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0643800","Transcript","very weakly similar to (84.0) AT2G45210 | Symbols: | auxin-responsive protein-related | chr2:18641884-18642372 FORWARDAuxin_inducible protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed",-0.9625449,{"$nulls":3},"LOC_Os02g39380.1","None"]
[null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os04g0567800","Transcript","weakly similar to ( 143) AT4G24060 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:12503970-12505417 FORWARDweakly similar to ( 117) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",-1.2354975,{"$nulls":8},"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0158800","Transcript","highly similar to ( 824) AT3G26370 | Symbols: | unknown protein | chr3:9656886-9659741 FORWARDDUF246 protein|growth regulator related protein, putative, expressed",1.3208412,{"$nulls":3},"LOC_Os03g01330.1","None"]
[null,"27.3.8","RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family","Os02g0726300","Transcript","weakly similar to ( 121) AT5G60850 | Symbols: OBP4 | OBP4; DNA binding / transcription factor | chr5:24480578-24481501 FORWARDweakly similar to ( 110) PBF_MAIZE Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize)zf-Dof protein|dof zinc finger domain containing protein, putative, expressed",3.431485,{"$nulls":8},"17.3.1.1.1","hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2","Os01g0851600","Transcript","weakly similar to ( 163) AT2G38050 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase | chr2:15921303-15922176 REVERSE Steroid_dh protein|3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed",1.7856712]
[null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0220400","Transcript","protein|GATA zinc finger domain containing protein, expressed",1.3303136,{"$nulls":8},"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os02g0113200","Transcript","moderately similar to ( 455) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 466) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450, putative, expressed",3.5112286]
[null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0155400","Transcript","protein|GATA zinc finger domain containing protein, expressed",2.987538,{"$nulls":8},"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os05g0211100","Transcript","moderately similar to ( 483) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 486) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450 51, putative, expressed",1.6188742]
[null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os05g0567900","Transcript","very weakly similar to (95.1) AT2G18380 | Symbols: | transcription factor | chr2:7982868-7984017 REVERSE protein|GATA zinc finger domain containing protein, expressed",-1.055427,{"$nulls":8},"17.3.1.2.6","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7","Os01g0134500","Transcript","moderately similar to ( 387) AT3G02580 | Symbols: STE1, DWF7, BUL1 | STE1 (STEROL 1); C-5 sterol desaturase | chr3:547048-548615 FORWARDmoderately similar to ( 387) SC5D_TOBAC Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) protein|fatty acid hydroxylase, putative, expressed",2.5228798]
[null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os06g0571800","Transcript","very weakly similar to (86.7) AT5G56860 | Symbols: GNC | GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor | chr5:22989630-22991351 REVERSE protein|GATA zinc finger domain containing protein, expressed",3.0469806,{"$nulls":8},"17.3.1.2.7","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5","Os02g0465400","Transcript","highly similar to ( 575) AT1G50430 | Symbols: DWF5, PA, LE, ST7R, 7RED | DWF5 (DWARF 5); sterol delta7 reductase | chr1:18682175-18685555 REVERSE ERG4_ERG24 protein|delta14-sterol reductase, putative, expressed",-1.0864153]
[null,"27.3.9","RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family","Os02g0806400","Transcript","weakly similar to ( 131) AT3G54810 | Symbols: BME3-ZF, BME3 | zinc finger (GATA type) family protein | chr3:20296957-20298236 FORWARD protein|GATA zinc finger domain containing protein, expressed",-1.787879,{"$nulls":8},"17.4.1","hormone metabolism.cytokinin.synthesis-degradation","Os03g0810100","Transcript","moderately similar to ( 274) AT3G63110 | Symbols: ATIPT3, IPT3 | ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups | chr3:23318437-23319447 REVERSE miaA MiaA protein|IPP transferase, putative, expressed",-1.1375446]
[null,"27.3.10","RNA.regulation of transcription.C2C2(Zn) YABBY family","Os07g0160100","Transcript","weakly similar to ( 141) AT1G08465 | Symbols: YAB2 | YAB2 (YABBY2); transcription factor | chr1:2676033-2679382 FORWARDmoderately similar to ( 276) YAB1_ORYSA Protein YABBY (OsYAB1) (Filamentous flower protein 1) - Oryza sativa (Rice)YABBY protein|YABBY domain containing protein, putative, expressed",2.8481522,{"$nulls":8},"17.4.2","hormone metabolism.cytokinin.signal transduction","Os09g0529900","Transcript","moderately similar to ( 284) AT4G10750 | Symbols: | HpcH/HpaI aldolase family protein | chr4:6618724-6619800 FORWARDHpcH HpcH_HpaI PRK10558 PRK10128 protein|4-hydroxy-2-oxovalerate aldolase, putative, expressed",1.2707883]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0871200","Transcript","moderately similar to ( 436) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS1-18 - C2H2 zinc finger protein, expressed",-1.065425,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os02g0280700","Transcript","moderately similar to ( 286) AT5G20400 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:6894871-6896185 FORWARDweakly similar to ( 172) LDOX_MALDO Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",3.7561703]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0195000","Transcript","moderately similar to ( 308) AT1G55110 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding | chr1:20560406-20562625 REVERSE protein|ZOS1-04 - C2H2 zinc finger protein, expressed",-0.9494095,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os08g0390200","Transcript","moderately similar to ( 283) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 240) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",4.8504515]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0951100","Transcript","moderately similar to ( 414) AT3G07940 | Symbols: | zinc finger and C2 domain protein, putative | chr3:2529542-2531368 FORWARD ArfGap ArfGap COG5347 C2 C2 protein|stromal membrane-associated protein, putative, expressed",3.5703247,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0690500","Transcript","moderately similar to ( 250) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 226) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",-1.3304685]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0572900","Transcript","moderately similar to ( 220) AT1G34370 | Symbols: STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding | chr1:12551449-12552501 FORWARD protein|ZOS2-11 - C2H2 zinc finger protein, expressed",-1.0505309,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os01g0352100","Transcript","moderately similar to ( 291) AT1G17010 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:5817667-5819183 FORWARDweakly similar to ( 178) FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) PcbC 2OG-FeII_Oxy protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed",3.340451]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os02g0198300","Transcript","moderately similar to ( 416) AT4G21160 | Symbols: ZAC | ZAC; ARF GTPase activator/ phospholipid binding | chr4:11284694-11286532 FORWARD ArfGap ArfGap COG5347 C2 C2 C2 protein|stromal membrane-associated protein, putative, expressed",1.8940853,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0439500","Transcript","moderately similar to ( 234) AT1G17020 | Symbols: SRG1, ATSRG1 | SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | chr1:5820258-5821741 FORWARDweakly similar to ( 160) FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",1.6984366]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os03g0279700","Transcript","very weakly similar to (97.4) AT3G53600 | Symbols: | zinc finger (C2H2 type) family protein | chr3:19875532-19876059 FORWARD protein|ZOS3-09 - C2H2 zinc finger protein, expressed",1.7891141,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0451000","Transcript","moderately similar to ( 400) AT1G05010 | Symbols: EFE, ACO4, EAT1 | EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | chr1:1431419-1432695 REVERSEhighly similar to ( 568) ACCO1_ORYSA 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed",2.1812222]
[null,"27.3.11","RNA.regulation of transcription.C2H2 zinc finger family","Os01g0715000","Transcript","moderately similar to ( 340) AT5G20220 | Symbols: | zinc knuckle (CCHC-type) family protein | chr5:6822208-6825771 FORWARD protein|zinc knuckle domain containing protein, expressed",1.0285195,{"$nulls":8},"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0248900","Transcript","moderately similar to ( 249) AT5G41980 | Symbols: | unknown protein | chr5:16793765-16794889 FORWARD protein|retrotransposon protein, putative, unclassified, expressed",6.0013676]
[null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0917400","Transcript","moderately similar to ( 309) AT3G02830 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARDhighly similar to ( 592) ZFNL2_ORYSA Zinc finger CCCH domain-containing protein ZFN-like 2 - Oryza sativa (Rice) protein|zinc finger C-x8-C-x5-C-x3-H type family protein, expressed",1.7494059,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108]
[null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os07g0568300","Transcript","moderately similar to ( 361) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-0.9563233,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os10g0450000","Transcript","weakly similar to ( 114) AT3G50150 | Symbols: | unknown protein | chr3:18595809-18597551 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",4.2582054]
[null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os12g0515500","Transcript","moderately similar to ( 369) AT2G41900 | Symbols: | zinc finger (CCCH-type) family protein | chr2:17491352-17493502 FORWARD protein|zinc finger family protein, putative, expressed",-1.0432993,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0163200","Transcript","weakly similar to ( 105) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1524832]
[null,"27.3.12","RNA.regulation of transcription.C3H zinc finger family","Os01g0192000","Transcript","moderately similar to ( 241) AT2G19810 | Symbols: | zinc finger (CCCH-type) family protein | chr2:8550419-8551498 FORWARD protein|zinc finger/CCCH transcription factor, putative, expressed",2.8330657,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057]
[null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os08g0174500","Transcript","weakly similar to ( 176) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 164) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os09g0304500","Transcript","weakly similar to ( 119) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1891744]
[null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os05g0463800","Transcript","weakly similar to ( 185) AT2G37060 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | chr2:15576336-15577660 FORWARDweakly similar to ( 190) NFYB_MAIZE Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box DNA-binding protein subunit B) - Zea mays (Maize) CBFD_NFYB_HMF protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.6632209,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0310600","Transcript","weakly similar to ( 150) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.4500562]
[null,"27.3.15","RNA.regulation of transcription.CCAAT box binding factor family, HAP3","Os03g0413000","Transcript","weakly similar to ( 194) AT4G14540 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | chr4:8344663-8345148 FORWARDweakly similar to ( 170) NFYB3_ORYSA Nuclear transcription factor Y subunit B-3 (OsNF-YB-3) (Transcriptional activator HAP3B) - Oryza sativa (Rice) CBFD_NFYB_HMF HHT1 protein|histone-like transcription factor and archaeal histone, putative, expressed",3.2168026,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0198500","Transcript","moderately similar to ( 298) AT1G47740 | Symbols: | unknown protein | chr1:17567903-17569035 FORWARD DUF862 protein|ethylene-responsive element-binding protein, putative, expressed",1.7501227]
[null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os03g0852300","Transcript","very weakly similar to (82.0) AT1G07980 | Symbols: NF-YC10 | NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | chr1:2473523-2474910 REVERSE protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.1165094,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os11g0543300","Transcript","moderately similar to ( 217) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.0513479]
[null,"27.3.16","RNA.regulation of transcription.CCAAT box binding factor family, HAP5","Os06g0667100","Transcript","weakly similar to ( 192) AT1G56170 | Symbols: HAP5B, ATHAP5B, NF-YC2 | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | chr1:21025118-21025717 FORWARD HAP5 protein|core histone H2A/H2B/H3/H4, putative, expressed",-1.2620894,{"$nulls":8},"17.5.2","hormone metabolism.ethylene.signal transduction","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696]
[null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os02g0174000","Transcript","moderately similar to ( 263) AT1G79430 | Symbols: APL, WDY | APL (ALTERED PHLOEM DEVELOPMENT); transcription factor/ transcription regulator | chr1:29877521-29879135 REVERSE protein|Myb transcription factor, putative, expressed",1.1381454,{"$nulls":8},"17.6.1","hormone metabolism.gibberelin.synthesis-degradation","Os11g0265800","Transcript","very weakly similar to (80.9) AT1G52820 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:19669216-19670321 FORWARD protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.7052648]
[null,"27.3.20","RNA.regulation of transcription.G2-like transcription factor family, GARP","Os04g0665600","Transcript","weakly similar to ( 126) AT5G06800 | Symbols: | myb family transcription factor | chr5:2103374-2105680 FORWARD protein|Myb-like DNA-binding domain containing protein, putative, expressed",-1.3667952,{"$nulls":8},"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os03g0856700","Transcript","moderately similar to ( 434) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 712) GAOX1_ORYSA Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 1, putative, expressed",1.865975]
[null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os11g0160600","Transcript","weakly similar to ( 114) AT4G08250 | Symbols: | scarecrow transcription factor family protein | chr4:5196787-5198238 FORWARDweakly similar to ( 120) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|nodulation-signaling pathway 2 protein, putative, expressed",1.1880302,{"$nulls":8},"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os01g0883800","Transcript","moderately similar to ( 369) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 655) GAOX2_ORYSA Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 2, putative, expressed",1.0044001]
[null,"27.3.21","RNA.regulation of transcription.GRAS transcription factor family","Os05g0500600","Transcript","moderately similar to ( 281) AT3G49950 | Symbols: | scarecrow transcription factor family protein | chr3:18522570-18523802 FORWARDweakly similar to ( 126) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|MONOCULM 1, putative, expressed",2.6618528,{"$nulls":8},"17.7.1.3","hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase","Os02g0110200","Transcript","moderately similar to ( 367) AT4G15440 | Symbols: HPL1, CYP74B2 | HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:8835869-8838462 FORWARDmoderately similar to ( 278) C74A4_ORYSA Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) protein|cytochrome P450, putative, expressed",3.3673182]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0198600","Transcript","very weakly similar to (99.0) AT4G36740 | Symbols: HB-5, ATHB40 | ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor | chr4:17314649-17316314 REVERSE protein|homeobox domain containing protein, expressed",1.6825858,{"$nulls":8},"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os01g0701700","Transcript","moderately similar to ( 308) AT4G36470 | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr4:17215128-17216475 REVERSEmoderately similar to ( 226) BAMT_ANTMA Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon)Methyltransf_7 protein|SAM dependent carboxyl methyltransferase, putative, expressed",-2.0907042]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os04g0548700","Transcript","weakly similar to ( 184) AT4G16780 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | chr4:9449291-9450604 FORWARD protein|homeobox associated leucine zipper, putative, expressed",2.2563107,{"$nulls":8},"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os05g0455200","Transcript","moderately similar to ( 216) AT5G02030 | Symbols: LSN, PNY, HB-6, BLR, RPL, BLH9, VAN | RPL (REPLUMLESS); DNA binding / sequence-specific DNA binding / transcription factor | chr5:395754-398872 FORWARD POX POX protein|homeodomain protein, putative, expressed",1.769432]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os10g0480200","Transcript","highly similar to ( 693) AT5G60690 | Symbols: REV, IFL, IFL1 | REV (REVOLUTA); DNA binding / lipid binding / transcription factor | chr5:24397734-24401933 FORWARDSTART START START protein|START domain containing protein, expressed",0.966623,{"$nulls":8},30.1,"signalling.in sugar and nutrient physiology","Os04g0620600","Transcript","protein|nitrate-induced NOI protein, expressed",2.4121397]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os06g0140700","Transcript","weakly similar to ( 155) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE protein|homeobox associated leucine zipper, putative, expressed",1.2395021,{"$nulls":8},"30.1.1","signalling.in sugar and nutrient physiology","Os06g0188400","Transcript","weakly similar to ( 193) AT5G11210 | Symbols: ATGLR2.5, GLR2.5 | ATGLR2.5; intracellular ligand-gated ion channel | chr5:3571214-3574537 REVERSEweakly similar to ( 126) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) ANF_receptor protein|glutamate receptor 2.7 precursor, putative, expressed",1.5466343]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os08g0481400","Transcript","weakly similar to ( 144) AT5G65310 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor | chr5:26102457-26103854 REVERSE protein|homeobox associated leucine zipper, putative, expressed",0.97592384,{"$nulls":8},"30.1.1","signalling.in sugar and nutrient physiology","Os06g0188800","Transcript","weakly similar to ( 151) AT2G29110 | Symbols: ATGLR2.8, GLR2.8 | ATGLR2.8; intracellular ligand-gated ion channel | chr2:12506880-12510552 REVERSEweakly similar to ( 115) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) Lig_chan protein|glutamate receptor 2.8 precursor, putative, expressed",1.8276078]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os09g0447000","Transcript","weakly similar to ( 176) AT5G06710 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA); DNA binding / transcription factor | chr5:2069093-2070284 REVERSE HALZ protein|homeobox associated leucine zipper, putative, expressed",-1.1042371,{"$nulls":8},"30.1.1","signalling.in sugar and nutrient physiology","Os02g0787600","Transcript","highly similar to ( 603) AT2G29100 | Symbols: ATGLR2.9, GLR2.9 | ATGLR2.9; intracellular ligand-gated ion channel | chr2:12501092-12504912 REVERSEmoderately similar to ( 407) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) Lig_chan ANF_receptor LivK PBPe protein|glutamate receptor, putative, expressed",-2.1467886]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0123500","Transcript","moderately similar to ( 368) AT1G62990 | Symbols: KNAT7, IXR11 | KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor | chr1:23337468-23340348 FORWARDmoderately similar to ( 360) HD1_BRANA Homeobox protein HD1 - Brassica napus (Rape) protein|homeobox protein knotted-1, putative, expressed",3.811927,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0480400","Transcript","highly similar to ( 649) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 175) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase PTKc S_TKc Pkinase_Tyr TyrKc S_TKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Fes_like PTKc_Frk_like PTKc_Lck_Blk PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Csk PTKc_Abl PTKc_Lyn PTKc_Chk PTKc_FGFR PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Ror PTKc_EphR PTKc_InsR_like PTKc_Trk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",2.7635052]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os03g0124000","Transcript","moderately similar to ( 241) AT5G41410 | Symbols: BEL1 | BEL1 (BELL 1); DNA binding / protein binding / transcription factor | chr5:16580424-16583770 FORWARD POX POX protein|homeobox domain containing protein, expressed",-1.0684227,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0649700","Transcript","moderately similar to ( 327) AT5G43020 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:17255426-17257742 REVERSEweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Src PTKc_Lck_Blk PTKc_Frk_like PTKc_Jak_rpt2 protein|receptor kinase, putative, expressed",2.0595152]
[null,"27.3.22","RNA.regulation of transcription.HB,Homeobox transcription factor family","Os01g0788800","Transcript","moderately similar to ( 326) AT4G21750 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA binding / sequence-specific DNA binding / transcription factor | chr4:11556965-11560243 FORWARDSTART START protein|Homeobox domain containing protein, expressed",1.2033843,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0133900","Transcript","highly similar to ( 522) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 147) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc PTKc Pkinase_Tyr TyrKc SPS1 PTKc_Src_like PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Yes protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.7740196]
[null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0104200","Transcript","moderately similar to ( 205) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDweakly similar to ( 187) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor precursor, putative, expressed",1.015623]
[null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os05g0530400","Transcript","weakly similar to ( 197) AT4G18880 | Symbols: AT-HSFA4A, HSF A4A | AT-HSFA4A; DNA binding / transcription factor | chr4:10347769-10349051 REVERSE HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.9081851,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0819100","Transcript","highly similar to ( 610) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 174) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc PTKc_Jak_rpt2 PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Fes_like PTKc_Frk_like PTKc_Trk PTKc_Tie2 PTKc_Lyn PTKc_Lck_Blk PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Tie1 PTKc_Ror PTKc_Fyn_Yrk PTKc_FGFR PTKc_Itk PTKc_Chk PTKc_Srm_Brk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.1429157]
[null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0749300","Transcript","moderately similar to ( 237) AT5G45710 | Symbols: AT-HSFA4C, RHA1, HSFA4C | RHA1 (ROOT HANDEDNESS 1); DNA binding / transcription factor | chr5:18541576-18542706 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.2446251,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os10g0492400","Transcript","weakly similar to ( 190) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 103) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc SPS1 protein|receptor kinase like protein, putative, expressed",3.4061668]
[null,"27.3.23","RNA.regulation of transcription.HSF,Heat-shock transcription factor family","Os01g0733200","Transcript","weakly similar to ( 179) AT3G24520 | Symbols: AT-HSFC1, HSFC1 | AT-HSFC1; DNA binding / transcription factor | chr3:8941455-8942531 FORWARD HSF_DNA-bind HSF HSF1 protein|HSF-type DNA-binding domain containing protein, expressed",-1.5364038,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947]
[null,"27.3.24","RNA.regulation of transcription.MADS box transcription factor family","Os06g0712700","Transcript","weakly similar to ( 179) AT3G54340 | Symbols: AP3, ATAP3 | AP3 (APETALA 3); DNA binding / transcription factor | chr3:20119428-20121087 REVERSEmoderately similar to ( 402) MAD16_ORYSA MADS-box transcription factor 16 (OsMADS16) (Protein SUPERWOMAN1) (Protein APETALA3-like) - Oryza sativa (Rice) MADS_MEF2_like MADS MADS K-box MADS_SRF_like SRF-TF protein|OsMADS16 - MADS-box family gene with MIKCc type-box, expressed",1.468964,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os09g0400500","Transcript","moderately similar to ( 397) AT3G17840 | Symbols: RLK902 | RLK902; ATP binding / kinase/ protein serine/threonine kinase | chr3:6106092-6108430 FORWARDweakly similar to ( 119) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr SPS1 TyrKc PTKc PTKc_Src_like PTKc_Jak_rpt2 PTKc_Csk_like protein|inactive receptor kinase At2g26730 precursor, putative, expressed",-1.3753079]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os07g0568700","Transcript","moderately similar to ( 211) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDhighly similar to ( 610) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor 1 precursor, putative, expressed",1.8588246]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0769900","Transcript","moderately similar to ( 437) AT1G05750 | Symbols: PDE247, CLB19 | PDE247 (pigment defective 247) | chr1:1721523-1723025 FORWARDvery weakly similar to (99.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.1371251,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0406800","Transcript","moderately similar to ( 476) AT1G03440 | Symbols: | leucine-rich repeat family protein | chr1:852681-853874 FORWARDweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase precursor, putative, expressed",2.1089206]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0552300","Transcript","highly similar to ( 946) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEweakly similar to ( 128) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.8654522,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0335500","Transcript","highly similar to ( 906) AT3G56370 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:20899403-20902390 REVERSEmoderately similar to ( 333) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc PTKc Pkinase TyrKc S_TKc PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Syk_like PTKc_EGFR_like PTKc_Ack_like PTK_CCK4 PTKc_Ror PTKc_Srm_Brk PTKc_Frk_like PTKc_Fes_like PTKc_c-ros PTKc_Csk_like PTKc_EphR PTKc_Jak2_Jak3_rpt2 PTKc_Trk PTKc_InsR_like PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Itk PTKc_Src PTKc_Lck_Blk PTKc_Met_Ron PTKc_Aatyk PTKc_Yes PTKc_Hck PTKc_Musk PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkC PTKc_Ror1 PTKc_Ror2 PTK_HER3 PTKc_Lyn PTKc_Abl PTKc_Aatyk1_Aatyk3 PTKc_TrkB PTKc_FAK PTKc_HER4 PTKc_DDR protein|receptor-like protein kinase precursor, putative, expressed",2.4075158]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0844000","Transcript","moderately similar to ( 445) AT2G27610 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:11783927-11786533 REVERSEweakly similar to ( 127) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.7728684,{"$nulls":8},"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0241800","Transcript","highly similar to ( 666) AT3G49140 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2758 (embryo defective 2758) (TAIR:AT4G33990.1). | chr3:18213981-18217848 REVERSEvery weakly similar to (95.1) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.5820802,{"$nulls":8},"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os05g0261700","Transcript","moderately similar to ( 490) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEvery weakly similar to (95.1) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|SHR5-receptor-like kinase, putative, expressed",2.650769]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0163600","Transcript","moderately similar to ( 479) AT4G15720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:8949569-8951419 FORWARD protein|tetratricopeptide-like helical, putative, expressed",-1.0337161,{"$nulls":8},"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0191500","Transcript","highly similar to ( 536) AT1G59720 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTION28); endonuclease | chr1:21939868-21941784 REVERSE protein|pentatricopeptide, putative, expressed",4.0154567,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0114150","Transcript","weakly similar to ( 149) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.5206258,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0308800","Transcript","moderately similar to ( 468) AT5G14210 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:4578503-4581374 REVERSEweakly similar to ( 107) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|expressed protein",4.467394]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0172600","Transcript","highly similar to ( 677) AT5G03800 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE protein|pentatricopeptide, putative, expressed",1.0694861,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0636900","Transcript","moderately similar to ( 467) AT2G29760 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12712884-12715100 FORWARDvery weakly similar to (99.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.0778502,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os02g0697500","Transcript","highly similar to ( 546) AT1G31920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:11461864-11463684 REVERSEvery weakly similar to (80.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1643367,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0478600","Transcript","moderately similar to ( 212) AT3G17640 | Symbols: | leucine-rich repeat family protein | chr3:6032393-6033583 FORWARD protein|polygalacturonase inhibitor 1 precursor, putative, expressed",4.090776]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0274800","Transcript","moderately similar to ( 224) AT1G69560 | Symbols: MYB105, AtMYB105 | MYB105 (myb domain protein 105); DNA binding / transcription factor | chr1:26157755-26158906 FORWARDweakly similar to ( 102) GAM1_ORYSA Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) REB1 protein|MYB family transcription factor, putative, expressed",-0.993018,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0773700","Transcript","nearly identical (1300) AT5G65700 | Symbols: BAM1 | BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase | chr5:26281826-26284945 FORWARDmoderately similar to ( 460) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc TyrKc Pkinase S_TKc PTKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Src_like SPS1 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_Tec_like PTKc_Syk_like PTKc_Ack_like PTKc_Itk PTKc_Tec_Rlk PTKc_Trk PTKc_EGFR_like PTKc_EphR_A2 PTKc_Fes_like PTKc_EphR_B PTKc_InsR_like PTKc_Met_Ron PTKc_Lck_Blk PTKc_Src PTK_HER3 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Btk_Bmx PTKc_Lyn PTKc_EphR_A PTKc_Yes PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Ror PTKc_Jak1_rpt2 PTKc_TrkA PTKc_Axl_like PTKc_Csk PTKc_TrkC PTKc_FGFR PTKc_HER4 PTKc_Chk PTKc_FAK PTKc_EphR_A10 PTKc_TrkB PTKc_Hck PTKc_Fer PTKc_Aatyk PTK_CCK4 PTKc_c-ros protein|receptor protein kinase CLAVATA1 precursor, putative, expressed",4.5269656]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0128000","Transcript","moderately similar to ( 238) AT1G68320 | Symbols: MYB62, AtMYB62, BW62B, BW62C | MYB62 (myb domain protein 62); DNA binding / transcription factor | chr1:25603842-25604884 FORWARDweakly similar to ( 155) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.60054,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os11g0482400","Transcript","moderately similar to ( 483) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSEvery weakly similar to (98.6) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide repeat protein PPR986-12, putative, expressed",3.0890915,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0532900","Transcript","moderately similar to ( 254) AT4G12350 | Symbols: MYB42, AtMYB42 | MYB42 (myb domain protein 42); transcription factor | chr4:7324912-7326636 FORWARDmoderately similar to ( 271) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) protein|MYB family transcription factor, putative, expressed",2.1058097,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os05g0522600","Transcript","highly similar to ( 746) AT5G25930 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr5:9050880-9053978 FORWARDmoderately similar to ( 373) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) S_TKc S_TKc Pkinase_Tyr PTKc Pkinase TyrKc PTKc_EphR SPS1 PTKc_Trk PTKc_Jak_rpt2 PTKc_Musk PTKc_EphR_A2 PTKc_InsR_like PTKc_DDR PTKc_Ror PTKc_Csk_like PTKc_EphR_B PTK_CCK4 PTKc_Srm_Brk PTKc_Src_like PTKc_EphR_A PTKc_EGFR_like PTKc_TrkC PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Abl PTKc_TrkA PTKc_Ack_like PTKc_Syk_like PTKc_FGFR4 PTKc_DDR_like PTKc_Fes_like PTKc_FGFR PTKc_DDR1 PTKc_Src PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_Met_Ron PTKc_Fyn_Yrk PTKc_TrkB PTKc_ALK_LTK PTKc_c-ros protein|receptor-like protein kinase 5 precursor, putative, expressed",-1.2118931]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os09g0474051","Transcript","moderately similar to ( 225) AT3G62890 | Symbols: | binding | chr3:23246168-23247973 FORWARD protein|pentatricopeptide, putative, expressed",1.4868604,{"$nulls":8},"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0508500","Transcript","moderately similar to ( 204) AT4G13480 | Symbols: AtMYB79 | AtMYB79 (myb domain protein 79); DNA binding / transcription factor | chr4:7836675-7837653 FORWARDweakly similar to ( 157) MYBA2_ORYSA Myb-related protein MYBAS2 - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.5152645,{"$nulls":8},"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0193900","Transcript","moderately similar to ( 219) AT3G05380 | Symbols: ALY2, ATALY2 | DNA binding / nucleic acid binding / transcription factor | chr3:1540961-1546139 FORWARD DIRP protein|DIRP family protein, putative, expressed",-1.6069416,{"$nulls":8},"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579,{"$nulls":8},"30.2.16","signalling.receptor kinases.Catharanthus roseus-like RLK1","Os03g0281500","Transcript","highly similar to ( 748) AT3G46290 | Symbols: | protein kinase, putative | chr3:17013009-17015501 FORWARDmoderately similar to ( 264) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Src_like PTK_CCK4 PTKc_Met_Ron PTKc_Itk PTKc_EphR PTKc_Tec_like PTKc_FGFR PTKc_Csk PTKc_Frk_like PTKc_Ror PTKc_Fer PTKc_TrkA PTKc_InsR_like PTKc_TrkB PTKc_Syk_like PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_FGFR1 PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Tie1 PTKc_FGFR4 PTKc_FGFR2 PTKc_TrkC PTKc_Chk PTKc_Fyn_Yrk PTKc_RET PTKc_Src PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Lyn PTKc_EGFR_like PTKc_FGFR3 PTKc_Axl_like PTKc_Lck_Blk PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_Abl PTKc_Tec_Rlk PTKc_Fes PTKc_FAK PTKc_Yes PTKc_Tie PTKc_IGF-1R PTKc_EphR_B PTKc_InsR PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Hck PTK_Ryk PTK_HER3 PTKc_EphR_A PTKc_Ror1 protein|TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed",-1.0393327]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0685400","Transcript","moderately similar to ( 224) AT4G37780 | Symbols: MYB87, ATMYB87 | MYB87 (MYB DOMAIN PROTEIN 87); DNA binding / transcription factor | chr4:17758404-17759526 REVERSEweakly similar to ( 164) MYB4_ORYSA Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) protein|MYB family transcription factor, putative, expressed",-1.3034965,{"$nulls":8},"30.2.17","signalling.receptor kinases.DUF 26","Os05g0442550","Transcript","moderately similar to ( 328) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDhighly similar to ( 697) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 rve protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.3304685]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os07g0634900","Transcript","moderately similar to ( 212) AT5G26660 | Symbols: ATMYB4, ATMYB86 | ATMYB86 (MYB DOMAIN PROTEIN 86); specific transcriptional repressor/ transcription repressor | chr5:9331775-9333044 REVERSEmoderately similar to ( 202) MYB3_HORVU Myb-related protein Hv33 - Hordeum vulgare (Barley) REB1 protein|myb-related protein Hv33, putative, expressed",3.0182467,{"$nulls":8},"30.2.17","signalling.receptor kinases.DUF 26","Os12g0456000","Transcript","moderately similar to ( 230) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDmoderately similar to ( 285) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.9853998]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os01g0305900","Transcript","moderately similar to ( 212) AT2G47460 | Symbols: MYB12, ATMYB12, PFG1 | MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor | chr2:19476438-19479242 FORWARDmoderately similar to ( 212) MYBP_MAIZE Myb-related protein P - Zea mays (Maize) protein|MYB family transcription factor, putative, expressed",1.7271547,{"$nulls":8},"30.2.17","signalling.receptor kinases.DUF 26","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0470600","Transcript","moderately similar to ( 327) AT5G56110 | Symbols: ATMYB80, ATMYB103, MYB103, MS188 | ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103); DNA binding / transcription factor | chr5:22719191-22720664 FORWARDweakly similar to ( 193) ODO1_PETHY ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) REB1 protein|MYB family transcription factor, putative, expressed",1.0198911,{"$nulls":8},"30.2.19","signalling.receptor kinases.legume-lectin","Os02g0640500","Transcript","highly similar to ( 582) AT2G37710 | Symbols: RLK | RLK (receptor lectin kinase); kinase | chr2:15814934-15816961 REVERSEweakly similar to ( 196) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Lectin_legB Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_EphR PTKc_Jak_rpt2 SPS1 PTKc_EphR_A2 PTKc_Tec_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Src_like PTKc_EGFR_like PTKc_EphR_B PTKc_Csk_like PTKc_EphR_A PTKc_Syk_like PTKc_Trk PTKc_Abl PTKc_Itk PTKc_FAK PTKc_Btk_Bmx PTKc_Fes_like PTKc_Tec_Rlk PTKc_Ack_like PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_InsR_like PTKc_DDR PTKc_Chk PTKc_Aatyk PTKc_Ror PTKc_Csk PTKc_c-ros PTKc_Axl_like PTK_HER3 PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Fes PTK_CCK4 PTKc_Yes PTKc_Musk PTKc_Lyn PTKc_FGFR PTKc_Met_Ron PTKc_HER4 protein|lectin receptor-type protein kinase, putative, expressed",1.3651978]
[null,"27.3.25","RNA.regulation of transcription.MYB domain transcription factor family","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292,{"$nulls":8},"30.2.22","signalling.receptor kinases.proline extensin like","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078]
[null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os10g0562100","Transcript","weakly similar to ( 108) AT2G38090 | Symbols: | myb family transcription factor | chr2:15945278-15946775 FORWARD protein|MYB family transcription factor, putative, expressed",-1.7148021,{"$nulls":8},"30.2.22","signalling.receptor kinases.proline extensin like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os05g0589400","Transcript","weakly similar to ( 124) AT5G47390 | Symbols: | myb family transcription factor | chr5:19227001-19228546 FORWARD protein|Myb transcription factor, putative, expressed",5.3580303,{"$nulls":8},"30.2.22","signalling.receptor kinases.proline extensin like","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0603300","Transcript","weakly similar to ( 145) AT5G56840 | Symbols: | DNA-binding family protein | chr5:22980789-22982152 FORWARD protein|Myb transcription factor, putative, expressed",1.9925747,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0127700","Transcript","weakly similar to ( 119) AT4G00960 | Symbols: | protein kinase family protein | chr4:414361-416180 FORWARD protein|TKL_IRAK_DUF26-lg.1 - DUF26 kinases have homology to DUF26 containing loci, expressed",-0.977979]
[null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os01g0524500","Transcript","weakly similar to ( 144) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.2737515,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126]
[null,"27.3.26","RNA.regulation of transcription.MYB-related transcription factor family","Os04g0341900","Transcript","weakly similar to ( 118) AT5G08520 | Symbols: | myb family transcription factor | chr5:2755470-2757741 REVERSE protein|MYB family transcription factor, putative, expressed",2.324516,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0117200","Transcript","moderately similar to ( 304) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 180) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Tec_like PTKc_Itk SPS1 PTKc_EGFR_like PTKc_Axl_like PTKc_Csk_like PTKc_EphR_A2 PTKc_Btk_Bmx PTKc_Frk_like PTKc_EphR_B PTKc_EphR_A PTKc_InsR_like PTKc_Ack_like PTKc_Fyn_Yrk PTKc_Src PTKc_FGFR PTKc_Fes_like PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Trk PTKc_Ror PTKc_Yes PTKc_Chk PTKc_ALK_LTK PTKc_Tec_Rlk PTKc_Lck_Blk PTKc_EphR_A10 PTKc_DDR PTK_HER3 PTKc_Tie1 PTKc_c-ros PTKc_Tie2 PTKc_Aatyk PTKc_DDR_like PTKc_Csk PTKc_Axl PTKc_Zap-70 PTKc_DDR1 PTKc_DDR2 PTKc_FAK PTKc_Tie PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Lyn PTKc_Ror1 PTKc_Fer PTKc_Syk PTKc_TrkA protein|TAK33, putative, expressed",-2.0088966]
[null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os03g0859900","Transcript","moderately similar to ( 250) AT5G60720 | Symbols: | unknown protein | chr5:24418436-24422177 REVERSEDUF547 protein|expressed protein",3.5007906,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0541500","Transcript","moderately similar to ( 307) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 142) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR PTKc_Syk_like PTKc_Csk_like PTKc_Src_like PTKc_Ror SPS1 PTKc_EphR_A2 PTKc_Trk PTKc_Srm_Brk PTKc_HER4 PTKc_Met_Ron PTKc_EGFR PTKc_Axl_like PTKc_Itk PTKc_ALK_LTK PTKc_Tec_like PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EphR_A PTKc_Lck_Blk PTKc_EphR_B PTKc_Jak1_rpt2 protein|TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.3138751]
[null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os06g0704100","Transcript","highly similar to ( 547) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",1.9001607,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os12g0527700","Transcript","moderately similar to ( 373) AT1G34300 | Symbols: | lectin protein kinase family protein | chr1:12503450-12505939 FORWARDhighly similar to ( 638) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase S_TKc S_TKc TyrKc Pkinase_Tyr PTKc PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Itk PTKc_EphR B_lectin B_lectin PTKc_EphR_A2 PTKc_Trk PTKc_Tec_like PTKc_Ror PTKc_Lck_Blk B_lectin PTKc_Chk PTKc_Src PTKc_Tie2 PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_InsR_like PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Fes_like PTKc_Tie1 PTKc_Ror1 PTKc_TrkA PTKc_Abl PTKc_Yes PTKc_Fes protein|S-locus-like receptor protein kinase, putative, expressed",-1.533811]
[null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os02g0153000","Transcript","moderately similar to ( 395) AT3G13000 | Symbols: | transcription factor | chr3:4158214-4160818 REVERSEDUF547 protein|ternary complex factor MIP1, putative, expressed",2.51517,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0470500","Transcript","moderately similar to ( 339) AT1G70530 | Symbols: | protein kinase family protein | chr1:26588750-26591379 REVERSEweakly similar to ( 199) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Src_like PTKc_Srm_Brk PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_EphR_A2 PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Lck_Blk PTKc_Lyn PTKc_Tec_like PTKc_Itk PTKc_Fes_like PTKc_DDR PTKc_Abl PTKc_Src PTKc_EphR_B PTKc_EphR_A PTKc_FGFR PTKc_Fyn_Yrk PTKc_Ror PTKc_Tyk2_rpt2 PTK_CCK4 PTKc_InsR_like PTKc_Musk PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Ror1 PTKc_EGFR_like PTKc_Syk_like PTKc_Yes PTKc_TrkB PTKc_Hck PTKc_TrkC PTKc_Jak1_rpt2 PTKc_Ack_like PTKc_Fer PTKc_TrkA PTKc_DDR_like PTKc_FGFR2 PTK_Ryk PTKc_FGFR4 PTKc_ALK_LTK PTKc_RET PTKc_DDR2 PTKc_DDR1 PTKc_Tec_Rlk PTKc_InsR PTKc_HER4 PTKc_Csk PTKc_FGFR3 PTKc_Ror2 PTKc_c-ros PTKc_EphR_A10 PTKc_PDGFR PTKc_Axl_like PTKc_FAK PTKc_FGFR1 PTKc_Fes PTKc_Syk PTK_HER3 PTKc_Zap-70 PTKc_Tie2 PTKc_Met_Ron protein|TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-2.5822263]
[null,"27.3.27","RNA.regulation of transcription.NAC domain transcription factor family","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606]
[null,"27.3.29","RNA.regulation of transcription.TCP transcription factor family","Os02g0747400","Transcript","weakly similar to ( 143) AT1G69690 | Symbols: | TCP family transcription factor, putative | chr1:26216449-26217426 FORWARDTCP protein|TCP-domain protein, putative, expressed",3.0791883,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os03g0221700","Transcript","highly similar to ( 657) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 240) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase S_TKc Pkinase_Tyr TyrKc PTKc S_locus_glycop SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk PTKc_EphR PTKc_Frk_like PTKc_Srm_Brk PTKc_Trk B_lectin B_lectin PTKc_FGFR PTKc_EGFR_like B_lectin PTKc_Lyn PTKc_Lck_Blk PTKc_Fes_like PTKc_Ror PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_EphR_A2 PTKc_EphR_A PTKc_TrkB PTKc_Musk PTKc_Fer PTKc_ALK_LTK PTKc_Axl_like PTKc_DDR PTKc_EphR_B PTK_HER3 PTKc_TrkC PTKc_Abl PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Syk_like PTKc_EphR_A10 PTKc_Fes PTKc_Btk_Bmx PTK_CCK4 PTKc_Src PTKc_Tec_Rlk PTKc_RET PTKc_c-ros PTKc_Chk PTKc_Yes PTKc_Csk PTKc_FGFR3 PTKc_Hck PTKc_Jak1_rpt2 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",2.5693429]
[null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0602300","Transcript","very weakly similar to (94.4) AT2G38250 | Symbols: | DNA-binding protein-related | chr2:16018384-16019500 FORWARD protein|transcription factor TF2, putative, expressed",-1.2535847,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0103700","Transcript","highly similar to ( 592) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 306) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase TyrKc Pkinase_Tyr PTKc S_TKc PTKc_EphR PTKc_Itk PTKc_Trk PTKc_Csk_like SPS1 PTKc_Frk_like PTKc_Tec_like PTKc_Src_like B_lectin PTKc_DDR PTKc_InsR_like PTKc_Abl B_lectin PTKc_Ror PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_FGFR PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Syk_like PTKc_EphR_A PTKc_Tec_Rlk PTKc_TrkC PTKc_TrkA PTKc_Met_Ron PTKc_ALK_LTK PTK_HER3 PTKc_DDR2 PTKc_Axl_like PTKc_Ack_like PTKc_Musk PTKc_Chk PTKc_c-ros PTKc_TrkB PAN_AP_plant PTKc_Btk_Bmx PTKc_Hck PTKc_Jak2_Jak3_rpt2 B_lectin S_locus_glycop PTKc_RET PTK_CCK4 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",1.1126283]
[null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os04g0445600","Transcript","weakly similar to ( 130) AT3G58630 | Symbols: | transcription factor | chr3:21683928-21685771 REVERSE protein|transcription factor like protein, putative, expressed",-1.0994588,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0672200","Transcript","moderately similar to ( 247) AT4G21390 | Symbols: B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding | chr4:11394458-11397474 REVERSEweakly similar to ( 171) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Chk PTKc_Frk_like PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Axl_like PTKc_EphR_B PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like PTKc_Csk PTKc_Abl PTKc_Ror1 PTKc_Fes_like PTKc_Tec_Rlk PTKc_EphR_A2 PTK_CCK4 protein|cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed",-2.140228]
[null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os01g0318400","Transcript","weakly similar to ( 150) AT3G10040 | Symbols: | transcription factor | chr3:3096580-3097875 REVERSE protein|homeodomain, putative, expressed",-1.3575705,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os02g0212900","Transcript","weakly similar to ( 132) AT1G61430 | Symbols: | S-locus protein kinase, putative | chr1:22664669-22667769 REVERSEvery weakly similar to (99.0) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc S_TKc Pkinase_Tyr Pkinase PTKc TyrKc protein|cysteine-rich receptor-like protein kinase 35 precursor, putative, expressed",1.4578999]
[null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os02g0648300","Transcript","weakly similar to ( 157) AT1G76890 | Symbols: GT2, AT-GT2 | GT2; transcription factor | chr1:28873211-28875203 REVERSE protein|expressed protein",3.4605591,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"27.3.30","RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family","Os10g0516500","Transcript","weakly similar to ( 167) AT1G76880 | Symbols: | trihelix DNA-binding protein, putative | chr1:28865594-28867931 FORWARD protein|expressed protein",-1.1469765,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822]
[null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os11g0490900","Transcript","weakly similar to ( 159) AT5G13080 | Symbols: WRKY75, ATWRKY75 | WRKY75; transcription factor | chr5:4149928-4151019 REVERSEWRKY protein|WRKY72, expressed",-2.0225337,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0408900","Transcript","moderately similar to ( 373) AT1G70740 | Symbols: | protein kinase family protein | chr1:26673847-26675687 REVERSEmoderately similar to ( 203) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Trk SPS1 PTKc_EphR PTKc_Csk_like PTKc_Ror PTKc_Fes_like PTKc_Srm_Brk PTKc_InsR_like PTKc_Frk_like PTKc_Syk_like PTKc_Src_like PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_TrkA PTKc_Lck_Blk PTKc_EGFR_like PTKc_Abl PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Ror2 PTKc_DDR PTKc_c-ros PTKc_Itk PTKc_FGFR3 PTKc_EphR_B PTKc_RET PTKc_PDGFR PTKc_FGFR4 PTKc_Chk PTKc_Ror1 PTKc_FGFR2 PTKc_EphR_A2 PTKc_EphR_A PTKc_Fer PTKc_Lyn PTKc_Tie2 PTKc_Src PTKc_DDR1 PTKc_Met_Ron PTKc_DDR2 PTKc_FGFR1 PTKc_Axl_like PTKc_Yes PTKc_DDR_like PTKc_FAK PTKc_InsR PTKc_Fes PTKc_Jak1_rpt2 PTKc_Tie1 protein|TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.0385976]
[null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0734000","Transcript","weakly similar to ( 170) AT5G41570 | Symbols: WRKY24, ATWRKY24 | WRKY24; transcription factor | chr5:16624220-16625689 FORWARDWRKY protein|WRKY23, expressed",-1.2598414,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0550500","Transcript","moderately similar to ( 217) AT1G11350 | Symbols: CBRLK1, SD1-13, RKS2 | SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase | chr1:3817725-3820752 REVERSEweakly similar to ( 184) SLSG3_BRAOL S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage)B_lectin B_lectin B_lectin protein|S-locus-specific glycoprotein S13 precursor, putative, expressed",-1.4175048]
[null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os01g0246700","Transcript","moderately similar to ( 280) AT1G62300 | Symbols: WRKY6, ATWRKY6 | WRKY6; transcription factor | chr1:23016887-23019155 REVERSEWRKY protein|WRKY1, expressed",-1.8576914,{"$nulls":8},"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0542400","Transcript","moderately similar to ( 445) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 199) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc PTKc Pkinase_Tyr S_TKc Pkinase S_TKc SPS1 PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like PTKc_Ror PTKc_Src_like PTKc_InsR_like PTKc_Tec_like PTKc_Trk PTKc_EphR PTKc_c-ros PTKc_Frk_like PTKc_Syk_like PTKc_Musk PTKc_RET PTKc_ALK_LTK PTKc_Lck_Blk PTKc_FGFR PTKc_Ack_like PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EGFR_like PTKc_Chk PTKc_Ror2 PTKc_Itk PTKc_Axl_like PTKc_Btk_Bmx PTKc_Ror1 PTKc_TrkB PTKc_Tec_Rlk PTKc_Lyn PTKc_TrkC PTKc_Fes_like PTKc_Axl PTKc_FGFR4 PTKc_PDGFR PTKc_Met_Ron PTK_CCK4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Jak1_rpt2 PTKc_Hck PTKc_TrkA PTKc_Tyk2_rpt2 PTKc_EphR_A2 PTKc_Tie2 PTKc_FGFR1 PTKc_EphR_A PTKc_FGFR3 PTKc_IGF-1R PTKc_DDR_like PTKc_FAK PTKc_Src PTK_HER3 PTK_Ryk PTKc_FGFR2 PTKc_Yes PTKc_InsR PTKc_Csk PTKc_DDR2 PTKc_EGFR PTKc_Tie PTKc_Syk PTKc_Tyro3 PTKc_Zap-70 PTKc_DDR1 PTKc_Tie1 PTKc_Fes PTKc_Fer PTKc_HER4 PTKc_EphR_A10 PTKc_Aatyk PTKc_VEGFR PTKc_HER2 protein|TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.1601444]
[null,"27.3.32","RNA.regulation of transcription.WRKY domain transcription factor family","Os08g0499300","Transcript","moderately similar to ( 327) AT5G56270 | Symbols: WRKY2, ATWRKY2 | WRKY2; transcription factor | chr5:22780816-22783137 FORWARDWRKY protein|WRKY30, expressed",-1.3271414,{"$nulls":8},"30.2.25","signalling.receptor kinases.wall associated kinase","Os08g0378000","Transcript","very weakly similar to (82.8) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|wall-associated kinase-like 2, putative, expressed",-2.227124]
[null,"27.3.34","RNA.regulation of transcription.Orphan family","Os01g0180300","Transcript","moderately similar to ( 228) AT3G16000 | Symbols: MFP1 | MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1); DNA binding | chr3:5431041-5433613 REVERSEmoderately similar to ( 221) MFP1_TOBAC MAR-binding filament-like protein 1-1 - Nicotiana tabacum (Common tobacco) protein|MAR-binding filament-like protein 1, putative, expressed",3.2926652,{"$nulls":8},"30.2.25","signalling.receptor kinases.wall associated kinase","Os01g0364800","Transcript","weakly similar to ( 155) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARD protein|OsWAK7 - OsWAK receptor-like protein kinase, expressed",-1.7365016]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0247100","Transcript","weakly similar to ( 167) AT3G58120 | Symbols: ATBZIP61, BZIP61 | BZIP61; DNA binding / transcription activator/ transcription factor | chr3:21521289-21523078 REVERSEvery weakly similar to (83.6) RF2B_ORYSA Transcription factor RF2b - Oryza sativa (Rice) protein|bZIP transcription factor family protein, putative, expressed",4.0527945,{"$nulls":8},"30.2.25","signalling.receptor kinases.wall associated kinase","Os10g0326100","Transcript","weakly similar to ( 129) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|OsWAK113 - OsWAK receptor-like protein OsWAK-RLP, expressed",3.3258743]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0132500","Transcript","very weakly similar to (88.6) AT1G75390 | Symbols: AtbZIP44 | AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44); DNA binding / protein heterodimerization/ transcription factor | chr1:28292224-28292665 FORWARD protein|CPuORF1 - conserved peptide uORF-containing transcript, expressed",-1.4448551,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os10g0531900","Transcript","weakly similar to ( 183) AT4G38900 | Symbols: | bZIP protein | chr4:18139564-18141520 REVERSEweakly similar to ( 120) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|bZIP family transcription factor, putative, expressed",3.415385,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os02g0193000","Transcript","moderately similar to ( 293) AT2G33580 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr2:14219848-14221842 REVERSEweakly similar to ( 139) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc SPS1 PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Chk PTKc_Src_like PTKc_EphR PTKc_Trk PTKc_Frk_like PTKc_Ack_like PTKc_Lck_Blk PTKc_Fes_like protein|LYK8, putative, expressed",-1.1901093]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os04g0495500","Transcript","weakly similar to ( 186) AT1G06070 | Symbols: | bZIP transcription factor, putative (bZIP69) | chr1:1835201-1837116 REVERSEweakly similar to ( 187) RF2A_ORYSA Transcription factor RF2a - Oryza sativa (Rice) protein|transcription factor RF2a, putative, expressed",1.9407967,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0128200","Transcript","weakly similar to ( 151) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDmoderately similar to ( 328) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR bZIP_1 BRLZ protein|transcription factor, putative, expressed",1.7083406,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0370900","Transcript","moderately similar to ( 391) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 163) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase SPS1 PTKc_Csk_like PTKc_Fes_like PTKc_Trk PTKc_RET PTKc_Ror PTKc_Fer PTKc_EphR PTKc_Jak_rpt2 PTKc_TrkA PTKc_Src_like PTKc_Frk_like PTKc_Chk PTKc_InsR_like PTKc_Fes PTKc_Itk PTKc_EGFR_like PTKc_Abl PTKc_Srm_Brk PTKc_FAK PTKc_EphR_A2 PTKc_Tie1 PTKc_ALK_LTK PTKc_Tec_like PTKc_Tie PTKc_Ack_like PTKc_Csk PTKc_FGFR PTKc_Axl_like PTKc_Btk_Bmx PTKc_IGF-1R PTKc_Tec_Rlk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_Met_Ron PTKc_Musk PTKc_EphR_B PTKc_Yes PTKc_Ror1 protein|OsWAK60 - OsWAK receptor-like protein kinase, expressed",-2.1680458]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0176900","Transcript","moderately similar to ( 252) AT5G10030 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor | chr5:3137648-3139295 REVERSEmoderately similar to ( 226) TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-1.2607719,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0288500","Transcript","moderately similar to ( 275) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 153) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase S_TKc Lectin_legB Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Ror PTKc_Srm_Brk PTKc_EphR_B PTKc_Trk PTKc_Syk_like PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_EphR_A2 PTKc_Abl PTKc_Src_like PTKc_Fes_like PTKc_EphR_A PTKc_Tec_like PTKc_InsR_like PTKc_Frk_like PTKc_Itk PTKc_TrkA PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Fes PTKc_Fer PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Ror2 PTKc_TrkC PTKc_Zap-70 PTKc_DDR PTK_Jak2_Jak3_rpt1 PTKc_FAK protein|protein kinase, putative, expressed",-2.1872857]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os02g0203000","Transcript","weakly similar to ( 113) AT5G11260 | Symbols: HY5, TED 5 | HY5 (ELONGATED HYPOCOTYL 5); DNA binding / double-stranded DNA binding / transcription factor | chr5:3593583-3594800 REVERSE protein|bZIP transcription factor domain containing protein, expressed",3.6010208,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os02g0154200","Transcript","highly similar to ( 761) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 635) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc Pkinase PTKc S_TKc S_TKc PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EGFR_like PTKc_InsR_like PTKc_Tec_like PTKc_Yes SPS1 PTKc_TrkA PTKc_EphR_A2 PTKc_Syk_like PTKc_Lyn PTKc_Src PTKc_Lck_Blk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_Csk PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Hck PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_Axl_like PTKc_EphR_A PTKc_Ror PTKc_EphR_B PTKc_Tec_Rlk PTK_CCK4 PTKc_Btk_Bmx PTKc_DDR PTKc_Chk PTKc_Ack_like PTKc_c-ros PTKc_IGF-1R PTKc_Met_Ron PTKc_RET PTKc_ALK_LTK PTKc_Tie1 PTKc_Tie2 PTKc_Tie PTKc_InsR protein|phytosulfokine receptor precursor, putative, expressed",1.4195126]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os08g0519800","Transcript","highly similar to ( 615) AT3G20250 | Symbols: APUM5 | APUM5 (Arabidopsis Pumilio 5); RNA binding / binding | chr3:7059098-7062660 REVERSE DUF632 COG5099 DUF630 protein|pumilio domain-containing protein PPD1, putative, expressed",-0.9846638,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0371200","Transcript","moderately similar to ( 256) AT1G16150 | Symbols: WAKL4 | WAKL4 (WALL ASSOCIATED KINASE-LIKE 4); kinase | chr1:5532415-5534877 FORWARDweakly similar to ( 169) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc S_TKc PTKc S_TKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Csk_like PTKc_Trk PTKc_EphR PTKc_Chk PTKc_Fes_like PTKc_EGFR_like PTKc_Frk_like PTKc_Met_Ron PTKc_TrkB PTKc_Fes PTKc_Src_like PTKc_Syk_like PTKc_Tec_like PTKc_InsR_like PTKc_TrkA PTKc_Srm_Brk PTKc_EphR_A2 PTKc_Fer PTKc_Ack_like PTKc_Itk PTKc_EphR_B PTKc_Ror PTKc_Abl PTKc_FAK PTKc_TrkC PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Musk PTKc_Axl_like protein|protein kinase domain containing protein, expressed",-1.3237983]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os12g0233800","Transcript","moderately similar to ( 206) AT1G32150 | Symbols: | bZIP transcription factor family protein | chr1:11566022-11568317 FORWARDweakly similar to ( 154) HBP1A_WHEAT Transcription factor HBP-1a (Histone-specific transcription factor HBP1) - Triticum aestivum (Wheat)MFMR BRLZ bZIP_1 protein|transcription factor, putative, expressed",-1.4053911,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os01g0690800","Transcript","moderately similar to ( 405) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 192) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc PTKc_Csk_like PTKc_EphR PTKc_Src_like PTKc_Tec_like PTKc_EGFR_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_Jak_rpt2 PTKc_Itk PTKc_Trk PTKc_Abl PTKc_Frk_like PTKc_FGFR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Syk_like PTKc_Ror PTKc_Ack_like PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Chk PTKc_Lyn PTKc_Axl_like PTKc_Src PTKc_DDR PTKc_EphR_A2 PTKc_Met_Ron PTKc_PDGFR PTKc_Jak2_Jak3_rpt2 PTKc_FGFR4 PTKc_Tie2 PTKc_Yes PTKc_c-ros PTKc_Fer PTKc_EphR_B PTKc_FGFR3 PTKc_InsR PTKc_HER4 PTKc_EphR_A10 PTKc_Hck PTKc_FGFR2 PTKc_DDR_like PTKc_Csk PTKc_EphR_A PTKc_Ror2 PTKc_Tie1 PTKc_EGFR PTKc_HER2 PTKc_RET PTKc_DDR2 PTK_HER3 PTKc_FGFR1 PTKc_FAK PTKc_Jak1_rpt2 PTKc_Fes PTKc_Axl PTKc_Ror1 PTKc_IGF-1R PTKc_DDR1 PTKc_Tie PTKc_Tyro3 PTKc_Tyk2_rpt2 protein|Protein kinase domain containing protein, expressed",-1.2190024]
[null,"27.3.35","RNA.regulation of transcription.bZIP transcription factor family","Os09g0489500","Transcript","moderately similar to ( 338) AT5G06839 | Symbols: | bZIP family transcription factor | chr5:2120911-2126217 FORWARDmoderately similar to ( 300) TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 (TGA2.1) - Nicotiana tabacum (Common tobacco) protein|transcription factor, putative, expressed",-2.236131,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0599000","Transcript","moderately similar to ( 490) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 208) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk SPS1 PTKc_Tec_like PTKc_Fes_like PTKc_Src_like PTKc_EGFR_like PTKc_Frk_like PTKc_EphR PTKc_Srm_Brk PTKc_Fer PTKc_InsR_like PTKc_Axl_like PTKc_Trk PTKc_DDR PTKc_Tec_Rlk PTKc_Syk_like PTKc_Abl PTKc_Ack_like PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Src PTK_CCK4 PTKc_c-ros PTKc_EphR_A2 PTKc_Lck_Blk PTKc_Fes PTKc_EphR_B PTKc_Tie1 PTKc_IGF-1R PTKc_ALK_LTK PTKc_TrkA PTKc_Axl PTKc_Chk PTKc_PDGFR PTKc_Ror PTKc_RET PTKc_Lyn PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Tie PTKc_Csk PTKc_FGFR PTKc_TrkB PTKc_Musk PTK_HER3 PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_HER4 PTKc_DDR_like PTKc_InsR PTKc_Tyro3 PTKc_TrkC PTKc_Yes PTK_Ryk PTKc_Aatyk PTKc_Ror1 PTKc_Zap-70 PTKc_HER2 PTKc_EGFR PTKc_DDR1 PTKc_Hck PTKc_Syk PTKc_FGFR1 protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed",-1.2069334]
[null,"27.3.36","RNA.regulation of transcription.Argonaute","Os01g0275600","Transcript","nearly identical (1214) AT2G27040 | Symbols: AGO4, OCP11 | AGO4 (ARGONAUTE 4); nucleic acid binding | chr2:11536795-11541503 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|argonaute, putative, expressed",1.4471418,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0127500","Transcript","moderately similar to ( 381) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDweakly similar to ( 174) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc TyrKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Trk SPS1 PTKc_Csk_like PTKc_Frk_like PTKc_Itk PTKc_Fes_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Syk_like PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Axl_like PTKc_InsR_like PTKc_Lck_Blk PTKc_Fer PTKc_Ack_like PTKc_Tec_Rlk PTKc_Abl PTKc_Ror PTKc_DDR PTKc_Src PTKc_EGFR_like PTKc_FAK PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Lyn PTKc_TrkA PTKc_FGFR PTKc_Tyro3 PTKc_c-ros PTKc_PDGFR PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkB PTKc_EphR_A PTKc_Zap-70 PTKc_DDR_like PTKc_Syk PTKc_Yes PTKc_Hck PTKc_Fes PTKc_Ror1 PTKc_RET PTKc_DDR2 PTKc_Axl PTKc_TrkC PTKc_Csk PTKc_Musk PTKc_EphR_B PTKc_Tyk2_rpt2 protein|OsWAK29 - OsWAK receptor-like protein kinase, expressed",-2.4608722]
[null,"27.3.39","RNA.regulation of transcription.AtSR Transcription Factor family","Os03g0851700","Transcript","moderately similar to ( 347) AT4G35450 | Symbols: AKR2, AFT, AKR2A | AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding | chr4:16839862-16841759 FORWARD ANK protein|ankyrin repeat domain containing protein, expressed",1.7291578,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os01g0694000","Transcript","moderately similar to ( 305) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 211) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Srm_Brk PTKc_Src_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Csk_like PTKc_Frk_like PTKc_Fes_like PTKc_Fer PTKc_EGFR_like SPS1 PTKc_TrkA PTKc_Lck_Blk PTKc_Src PTKc_Chk PTKc_Tec_like PTKc_InsR_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_Abl PTKc_Syk_like PTKc_TrkC PTKc_EphR PTKc_Ror PTKc_DDR PTKc_Fyn_Yrk PTKc_Hck PTKc_EphR_A2 PTKc_Itk PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_Yes PTKc_c-ros PTKc_EphR_B PTK_CCK4 PTKc_Tie1 PTKc_EphR_A PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_FGFR PTK_HER3 PTKc_Csk PTKc_Zap-70 PTKc_Tec_Rlk PTKc_Axl PTKc_Fes PTKc_Tie PTKc_HER4 PTKc_Ror2 PTKc_Syk PTKc_Tie2 protein|expressed protein",-1.5088626]
[null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0190300","Transcript","weakly similar to ( 125) AT3G16500 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor | chr3:5612801-5614208 REVERSEweakly similar to ( 197) IAA2_ORYSA Auxin-responsive protein IAA2 (Indoleacetic acid-induced protein 2) - Oryza sativa (Rice)AUX_IAA protein|OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed",1.2362556,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118]
[null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os01g0231000","Transcript","weakly similar to ( 183) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 343) IAA3_ORYSA Auxin-responsive protein IAA3 (Indoleacetic acid-induced protein 3) - Oryza sativa (Rice)AUX_IAA protein|OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed",1.1733681,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os12g0210400","Transcript","highly similar to ( 818) AT1G79620 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:29957633-29962174 REVERSEmoderately similar to ( 233) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Itk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Src_like PTKc_Ror PTKc_EphR PTKc_Srm_Brk PTKc_Trk PTKc_Tec_like PTKc_Frk_like PTKc_Btk_Bmx PTKc_Ack_like SPS1 PTKc_EGFR_like PTKc_Syk_like PTKc_EphR_A2 PTKc_Chk PTKc_Jak1_rpt2 PTKc_Src PTKc_c-ros PTKc_Met_Ron PTKc_TrkB PTKc_Lck_Blk PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_RET PTKc_Tec_Rlk PTKc_Tie PTKc_Tie2 PTKc_Tie1 PTKc_TrkC PTK_CCK4 PTKc_Fyn_Yrk PTKc_Fer PTKc_Yes PTKc_EphR_A PTKc_TrkA PTKc_Abl PTKc_Ror1 PTKc_InsR_like PTKc_EphR_B PTKc_Lyn PTKc_Musk PTKc_ALK_LTK PTKc_Csk PTKc_Fes PTKc_HER2 PTK_HER3 PTKc_DDR PTKc_Zap-70 PTKc_EGFR PTKc_Axl_like PTKc_Syk PTKc_Hck PTKc_FGFR2 PTKc_HER4 PTKc_FGFR1 PTKc_FAK PTKc_FGFR3 PTKc_FGFR4 PTKc_Ror2 protein|leucine-rich repeat family protein, putative, expressed",-1.025217]
[null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os06g0597000","Transcript","weakly similar to ( 112) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 210) IAA23_ORYSA Auxin-responsive protein IAA23 (Indoleacetic acid-induced protein 23) - Oryza sativa (Rice)AUX_IAA protein|OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed",1.4440836,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606]
[null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os05g0230700","Transcript","weakly similar to ( 188) AT4G29080 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | chr4:14323665-14325213 REVERSEmoderately similar to ( 348) IAA17_ORYSA Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) - Oryza sativa (Rice)AUX_IAA protein|OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed",1.7808269,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os01g0171000","Transcript","highly similar to ( 848) AT1G60800 | Symbols: NIK3 | NIK3 (NSP-INTERACTING KINASE 3); kinase | chr1:22383601-22386931 REVERSEmoderately similar to ( 270) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc PTKc Pkinase_Tyr S_TKc S_TKc Pkinase PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EphR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_EGFR_like PTKc_Abl PTKc_Src_like PTKc_Tec_like PTKc_Syk_like PTKc_Fer PTKc_Met_Ron PTKc_Frk_like PTKc_Trk PTKc_InsR PTKc_Tie2 PTKc_FGFR PTKc_Itk PTKc_Lyn PTKc_EphR_A2 PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_Ror PTKc_Fes PTKc_Axl_like PTKc_DDR PTKc_c-ros PTKc_RET PTKc_Chk PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_Tie PTKc_Btk_Bmx PTKc_ALK_LTK PTKc_TrkC PTKc_IGF-1R PTKc_Csk PTKc_Ror1 PTKc_EGFR PTKc_Musk protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",1.0357467]
[null,"27.3.40","RNA.regulation of transcription.Aux/IAA family","Os07g0182400","Transcript","weakly similar to ( 140) AT1G04240 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSEmoderately similar to ( 320) IAA24_ORYSA Auxin-responsive protein IAA24 (Indoleacetic acid-induced protein 24) - Oryza sativa (Rice)AUX_IAA protein|OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed",1.0804805,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os07g0494300","Transcript","moderately similar to ( 220) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 159) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase_Tyr S_TKc Pkinase PTKc TyrKc PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Itk PTKc_Src_like PTKc_Csk_like PTKc_Tec_like SPS1 PTKc_Trk PTKc_Srm_Brk PTKc_Syk_like PTKc_Frk_like PTKc_Abl PTKc_Chk PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Fer PTKc_Ror PTKc_Fes PTKc_EGFR_like PTKc_Ack_like PTKc_Csk PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_InsR_like PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Musk protein|OsWAK70 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed",2.8939917]
[null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0511500","Transcript","highly similar to ( 508) AT1G05120 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1471624-1476067 REVERSEvery weakly similar to (89.0) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) HepA HELICc protein|DNA repair protein rhp16, putative, expressed",-1.1601919,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os09g0355400","Transcript","moderately similar to ( 323) AT4G29990 | Symbols: | light repressible receptor protein kinase | chr4:14665802-14669438 REVERSEmoderately similar to ( 249) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Fes_like PTKc_EphR PTKc_Src PTKc_InsR_like PTKc_Jak_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_Itk PTKc_Lck_Blk PTKc_Syk_like PTKc_Lyn PTKc_Ror PTKc_Yes PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Btk_Bmx SPS1 PTKc_Ack_like PTKc_FGFR PTKc_TrkB PTKc_TrkC PTKc_Fer PTKc_Tie2 PTKc_DDR PTKc_Tie1 PTKc_Fes PTK_CCK4 PTKc_ALK_LTK PTKc_PDGFR PTKc_Hck PTKc_c-ros PTKc_Musk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tie PTKc_Tec_Rlk PTKc_Csk PTKc_Abl PTKc_EphR_A2 PTKc_DDR1 PTKc_DDR_like PTKc_EGFR_like PTKc_Axl_like PTKc_DDR2 PTKc_EphR_A PTKc_FGFR1 PTKc_Jak1_rpt2 PTKc_Tyk2_rpt2 PTKc_Aatyk PTKc_EphR_B PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_RET PTKc_Zap-70 PTKc_Ror1 PTKc_IGF-1R protein|protein kinase domain containing protein, expressed",-1.3259019]
[null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os07g0434500","Transcript","highly similar to ( 743) AT2G16390 | Symbols: DRD1, CHR35, DMS1 | DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding | chr2:7097638-7101096 FORWARD HepA SNF2_N protein|DRD1, putative, expressed",1.2663385,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"27.3.44","RNA.regulation of transcription.Chromatin Remodeling Factors","Os05g0150300","Transcript","nearly identical (1538) AT3G06400 | Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | chr3:1941066-1946700 FORWARDnearly identical (1650) ISW2_ORYSA Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) SNF2_N HepA SLIDE HELICc DEXDc DEXHc HELICc Helicase_C DEXDc protein|chromatin-remodeling complex ATPase chain, putative, expressed",-1.140707,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os07g0501800","Transcript","highly similar to ( 779) AT1G28340 | Symbols: AtRLP4 | AtRLP4 (Receptor Like Protein 4); protein binding | chr1:9940175-9943252 FORWARDvery weakly similar to (94.0) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) protein|leucine-rich repeat family protein, putative, expressed",3.2734687]
[null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os11g0463600","Transcript","weakly similar to ( 164) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0070429,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0430400","Transcript","moderately similar to ( 332) AT3G19300 | Symbols: | protein kinase family protein | chr3:6690242-6693210 REVERSEweakly similar to ( 166) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_Srm_Brk SPS1 PTKc_Csk_like PTKc_Src_like PTKc_EphR PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Frk_like PTKc_Trk PTKc_Chk protein|receptor-like kinase, putative, expressed",2.069229]
[null,"27.3.48","RNA.regulation of transcription.FHA transcription factor","Os08g0528900","Transcript","moderately similar to ( 378) AT3G07220 | Symbols: | transcriptional activator, putative | chr3:2297968-2299407 FORWARD protein|FHA domain containing protein, putative, expressed",-1.0100232,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os09g0353200","Transcript","moderately similar to ( 498) AT1G51860 | Symbols: | leucine-rich repeat protein kinase, putative | chr1:19257634-19261479 REVERSEmoderately similar to ( 211) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Tec_like PTKc_Csk_like PTKc_Frk_like PTKc_Trk PTKc_Itk PTKc_Srm_Brk PTKc_Btk_Bmx PTKc_Src PTKc_Fer PTKc_Ror SPS1 PTKc_Lck_Blk PTKc_Abl PTKc_Tie1 PTKc_Fyn_Yrk PTKc_Yes PTKc_EphR PTKc_Syk_like PTKc_Lyn PTKc_c-ros PTKc_EGFR_like PTKc_Tie PTKc_InsR_like PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Csk PTKc_Tie2 PTKc_Chk PTKc_Fes PTKc_TrkB PTKc_DDR PTKc_Musk PTKc_Axl_like PTKc_TrkA PTKc_TrkC PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_Ror1 PTKc_DDR_like PTKc_ALK_LTK PTKc_Hck PTKc_Met_Ron PTKc_DDR2 PTKc_DDR1 PTKc_EphR_A2 PTK_Ryk PTK_CCK4 PTKc_RET PTKc_EphR_A PTKc_FAK PTKc_EphR_A10 PTKc_PDGFR PTKc_Aatyk PTKc_Jak1_rpt2 PTKc_FGFR1 PTKc_Tyro3 PTKc_FGFR4 PTKc_FGFR3 PTKc_Ror2 PTKc_IGF-1R PTK_HER3 PTKc_EphR_B PTKc_FGFR2 PTKc_Zap-70 protein|expressed protein",-1.3962272]
[null,"27.3.49","RNA.regulation of transcription.GeBP like","Os12g0242800","Transcript","weakly similar to ( 149) AT5G14280 | Symbols: | DNA-binding storekeeper protein-related | chr5:4609123-4611444 FORWARD protein|DNA-binding storekeeper protein-related, putative, expressed",1.9528753,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os04g0672100","Transcript","highly similar to ( 923) AT2G02220 | Symbols: ATPSKR1, PSKR1 | PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase | chr2:584098-587124 REVERSEhighly similar to ( 904) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_EGFR_like PTKc_InsR_like PTKc_Frk_like PTKc_Trk PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_TrkC PTKc_TrkA PTKc_Itk PTKc_Musk PTKc_Tec_like PTKc_TrkB PTKc_EphR_A PTKc_Syk_like PTKc_Ror PTKc_Met_Ron PTKc_Csk PTKc_Axl_like PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Fyn_Yrk PTKc_Hck PTKc_Btk_Bmx PTKc_Chk PTKc_Yes PTKc_Fes_like PTKc_FGFR PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_Tec_Rlk PTKc_DDR PTKc_Tie2 PTKc_Ack_like PTKc_c-ros protein|phytosulfokine receptor precursor, putative, expressed",-1.2613779]
[null,"27.3.50","RNA.regulation of transcription.General Transcription","Os08g0532500","Transcript","weakly similar to ( 172) AT4G35540 | Symbols: | transcription regulator/ zinc ion binding | chr4:16873939-16875522 FORWARD protein|zinc ion binding protein, putative, expressed",-1.0528625,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398]
[null,"27.3.54","RNA.regulation of transcription.Histone acetyltransferases","Os04g0484900","Transcript","highly similar to ( 993) AT5G50320 | Symbols: ELO3, HAG3, HAC8 | ELO3 (ELONGATA 3); histone acetyltransferase | chr5:20481200-20484811 REVERSEnearly identical (1061) ELP3_ORYSA Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) ELP3 COG1242 Elp3 protein|elongator complex protein 3, putative, expressed",-0.9539693,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os01g0113200","Transcript","moderately similar to ( 327) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 196) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr PTKc S_TKc Pkinase S_TKc PTKc_Abl PTKc_Src_like PTKc_Csk_like PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Syk_like PTKc_FGFR PTKc_Tec_like PTKc_Frk_like PTKc_Itk PTKc_InsR_like PTKc_Trk PTKc_Ror PTK_HER3 PTKc_Axl_like PTKc_Fes_like PTKc_Hck PTKc_Lck_Blk PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Lyn PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Csk PTKc_Btk_Bmx PTKc_HER4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Ack_like PTKc_c-ros PTKc_InsR PTKc_ALK_LTK PTKc_Fer PTK_CCK4 PTKc_EphR_A10 PTKc_Src PTKc_EphR_A PTKc_EGFR PTKc_Yes PTKc_Met_Ron PTKc_PDGFR PTKc_IGF-1R PTKc_Axl PTKc_HER2 PTKc_Aatyk PTKc_RET PTKc_Ror2 PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_Tie2 PTKc_Zap-70 PTKc_Tyk2_rpt2 PTKc_Syk PTKc_Tie1 PTKc_DDR_like PTKc_FGFR1 PTKc_FAK PTKc_Aatyk1_Aatyk3 PTKc_DDR PTKc_Tie PTKc_Ror1 PTKc_Jak1_rpt2 PTKc_Fes PTKc_Musk protein|Ser/Thr receptor-like kinase, putative, expressed",1.2218553]
[null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os09g0551600","Transcript","very weakly similar to (93.2) AT1G20696 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181170 FORWARDvery weakly similar to (99.4) HMGL_IPONI HMG1/2-like protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|HMG1/2, putative, expressed",2.2946422,{"$nulls":8},"30.2.99","signalling.receptor kinases.misc","Os06g0588800","Transcript","highly similar to ( 601) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 458) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase_Tyr S_TKc S_TKc Pkinase TyrKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Srm_Brk PTKc_Trk PTKc_InsR_like PTKc_Met_Ron PTKc_Src_like PTKc_Tec_like PTKc_Axl_like PTKc_Fes_like PTKc_Syk_like PTKc_EphR PTKc_Frk_like PTKc_Btk_Bmx PTKc_TrkA PTK_Ryk SPS1 PTKc_Chk PTKc_TrkC PTKc_Abl PTKc_FGFR PTK_CCK4 PTKc_c-ros PTKc_Itk PTKc_Csk PTKc_TrkB PTKc_ALK_LTK PTKc_Ror PTKc_Tie1 protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed",-2.0589373]
[null,"27.3.62","RNA.regulation of transcription.Nucleosome/chromatin assembly factor group","Os08g0108200","Transcript","highly similar to ( 540) AT5G64630 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIATA 2); nucleotide binding / protein binding | chr5:25833298-25836158 FORWARD WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.5532484,{"$nulls":8},30.3,"signalling.calcium","Os01g0279300","Transcript","moderately similar to ( 245) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 243) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam3 - Calmodulin, expressed",-1.3882551]
[null,"27.3.64","RNA.regulation of transcription.PHOR1","Os02g0540700","Transcript","weakly similar to ( 123) AT3G18710 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29); ubiquitin-protein ligase | chr3:6434234-6435481 REVERSEUbox U-box protein|U-box domain containing protein, expressed",-1.6222826,{"$nulls":8},30.3,"signalling.calcium","Os01g0955500","Transcript","very weakly similar to (85.5) AT3G50770 | Symbols: | calmodulin-related protein, putative | chr3:18873987-18874604 FORWARD protein|OsCML19 - Calmodulin-related calcium sensor protein, expressed",-1.8308636]
[null,"27.3.66","RNA.regulation of transcription.Psudo ARR transcription factor family","Os09g0532400","Transcript","moderately similar to ( 259) AT5G24470 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator | chr5:8356204-8358873 REVERSEnearly identical (1099) PRR95_ORYSA Two-component response regulator-like PRR95 (Pseudo-response regulator 95) (OsPRR95) - Oryza sativa (Rice)Response_reg REC REC AtoC CheY protein|response regulator receiver domain containing protein, expressed",2.290649,{"$nulls":8},30.3,"signalling.calcium","Os01g0896200","Transcript","weakly similar to ( 140) AT3G59690 | Symbols: IQD13 | IQD13 (IQ-domain 13); calmodulin binding | chr3:22049572-22051479 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",3.0610015]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os10g0501300","Transcript","moderately similar to ( 277) AT2G20710 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8926535-8927722 FORWARD protein|pentatricopeptide, putative, expressed",-1.0453898,{"$nulls":8},30.3,"signalling.calcium","Os08g0300200","Transcript","highly similar to ( 598) AT1G05500 | Symbols: SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1 | NTMC2T2.1 | chr1:1625098-1628940 FORWARD COG5038 C2 C2 C2_1 C2 protein|expressed protein",1.4960216]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os02g0469200","Transcript","highly similar to ( 726) AT5G58100 | Symbols: | unknown protein | chr5:23507828-23514863 FORWARD protein|expressed protein",-1.0693129,{"$nulls":8},30.3,"signalling.calcium","Os03g0130500","Transcript","moderately similar to ( 395) AT1G20760 | Symbols: | calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD EH EH protein|EF hand family protein, putative, expressed",-1.0064472]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958,{"$nulls":8},30.3,"signalling.calcium","Os02g0158100","Transcript","highly similar to ( 872) AT3G20290 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding | chr3:7075057-7078655 REVERSE Dynamin_N protein|EH domain-containing protein 1, putative, expressed",2.9534626]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0198900","Transcript","moderately similar to ( 349) AT1G19340 | Symbols: | methyltransferase MT-A70 family protein | chr1:6684798-6686798 FORWARD MT-A70 protein|MT-A70 domain containing protein, expressed",1.2118767,{"$nulls":8},30.3,"signalling.calcium","Os01g0194200","Transcript","weakly similar to ( 197) AT2G26180 | Symbols: IQD6 | IQD6 (IQ-domain 6); calmodulin binding | chr2:11143433-11144982 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.2940699]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0270000","Transcript","weakly similar to ( 132) AT2G45430 | Symbols: | DNA-binding protein-related | chr2:18727848-18728801 FORWARDDUF296 protein|DNA binding protein, putative, expressed",-1.075112,{"$nulls":8},30.3,"signalling.calcium","Os02g0247800","Transcript","highly similar to ( 508) AT1G53210 | Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD protein|calcium-binding EF hand family protein, putative, expressed",-1.1376272]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0278000","Transcript","moderately similar to ( 323) AT2G13690 | Symbols: | PRLI-interacting factor, putative | chr2:5706704-5708895 REVERSE protein|H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed",1.0838779,{"$nulls":8},30.3,"signalling.calcium","Os03g0808600","Transcript","highly similar to ( 691) AT5G12480 | Symbols: CPK7 | CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:4047817-4050035 REVERSEmoderately similar to ( 478) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc FRQ1 protein|CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-0.9945205]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0528000","Transcript","weakly similar to ( 106) AT3G49410 | Symbols: | unknown protein | chr3:18325015-18328858 FORWARD protein|expressed protein",-0.9678057,{"$nulls":8},30.3,"signalling.calcium","Os10g0539600","Transcript","highly similar to ( 721) AT2G17290 | Symbols: CPK6, ATCDPK3 | CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr2:7517005-7519239 FORWARDnearly identical (1090) CDPK1_ORYSA Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 FRQ1 protein|CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.3820488]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os09g0542000","Transcript","weakly similar to ( 186) AT1G76010 | Symbols: | nucleic acid binding | chr1:28528505-28530488 REVERSE Alba protein|protein of unknown function domain containing protein, expressed",-1.0918126,{"$nulls":8},30.3,"signalling.calcium","Os10g0471400","Transcript","highly similar to ( 655) AT4G28600 | Symbols: NPGR2 | NPGR2 (no pollen germination related 2); calmodulin binding | chr4:14130046-14132599 FORWARD protein|tetratricopeptide repeat domain containing protein, expressed",2.6239593]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os03g0735300","Transcript","weakly similar to ( 182) AT3G07030 | Symbols: | nucleic acid binding | chr3:2223001-2225254 REVERSE Alba protein|nucleic acid binding protein, putative, expressed",-1.0198506,{"$nulls":8},30.3,"signalling.calcium","Os01g0833800","Transcript","weakly similar to ( 150) AT5G03040 | Symbols: iqd2 | iqd2 (IQ-domain 2); calmodulin binding | chr5:710380-712406 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",-0.994442]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os04g0544400","Transcript","moderately similar to ( 404) AT1G02150 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:408779-410433 FORWARD protein|PPR repeat domain containing protein, putative, expressed",2.26373,{"$nulls":8},30.3,"signalling.calcium","Os05g0105600","Transcript","moderately similar to ( 249) AT1G79270 | Symbols: ECT8 | ECT8 (evolutionarily conserved C-terminal region 8) | chr1:29816157-29818811 FORWARD YTH protein|ECT protein, putative, expressed",1.3894128]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os01g0953801","Transcript","weakly similar to ( 112) AT5G49700 | Symbols: | DNA-binding protein-related | chr5:20192599-20193429 FORWARDDUF296 protein|DNA binding protein, putative, expressed",4.34181,{"$nulls":8},30.3,"signalling.calcium","Os01g0716200","Transcript","weakly similar to ( 186) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",3.9512074]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os08g0451400","Transcript","highly similar to ( 781) AT3G43240 | Symbols: | ARID/BRIGHT DNA-binding domain-containing protein | chr3:15210032-15214440 REVERSE protein|ARID/BRIGHT DNA-binding domain containing protein, expressed",-1.0829905,{"$nulls":8},30.3,"signalling.calcium","Os12g0619000","Transcript","weakly similar to ( 165) AT3G22190 | Symbols: IQD5 | IQD5 (IQ-domain 5); calmodulin binding | chr3:7831280-7833512 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.3225497]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os12g0579000","Transcript","moderately similar to ( 262) AT5G61150 | Symbols: VIP4 | VIP4 (VERNALIZATION INDEPENDENCE 4); protein binding | chr5:24603846-24607528 REVERSE Leo1 protein|VIP4, putative, expressed",-0.9946081,{"$nulls":8},30.3,"signalling.calcium","Os07g0170300","Transcript","moderately similar to ( 300) AT5G61020 | Symbols: ECT3 | ECT3 | chr5:24557485-24559780 REVERSE YTH protein|YT521-B, putative, expressed",-1.0645069]
[null,"27.3.67","RNA.regulation of transcription.putative transcription regulator","Os06g0472000","Transcript","moderately similar to ( 231) AT1G53670 | Symbols: MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase | chr1:20036687-20038074 FORWARD PRK00222 COG0229 SelR PRK05550 PRK05508 protein|peptide methionine sulfoxide reductase msrB, putative, expressed",1.7438723,{"$nulls":8},30.3,"signalling.calcium","Os03g0748000","Transcript","moderately similar to ( 389) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.1706415]
[null,"27.3.68","RNA.regulation of transcription.PWWP domain protein","Os03g0358000","Transcript","moderately similar to ( 232) AT3G63070 | Symbols: | PWWP domain-containing protein | chr3:23302667-23309575 FORWARDRPR protein|PWWP domain containing protein, expressed",-1.0836544,{"$nulls":8},30.3,"signalling.calcium","Os01g0950700","Transcript","very weakly similar to (97.1) AT2G38800 | Symbols: | calmodulin-binding protein-related | chr2:16216999-16218837 FORWARDCaM_binding protein|expressed protein",-2.1979692]
[null,"27.3.69","RNA.regulation of transcription.SET-domain transcriptional regulator family","Os12g0236900","Transcript","highly similar to ( 659) AT5G14260 | Symbols: | SET domain-containing protein | chr5:4601139-4603873 FORWARD Rubis-subs-bind protein|SET domain-containing protein, putative, expressed",1.5258604,{"$nulls":8},30.3,"signalling.calcium","Os03g0158500","Transcript","moderately similar to ( 359) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.2037576]
[null,"27.3.73","RNA.regulation of transcription.Zn-finger(CCHC)","Os02g0523500","Transcript","nearly identical (1254) AT5G07350 | Symbols: | tudor domain-containing protein / nuclease family protein | chr5:2319790-2324892 REVERSE TUDOR SNc SNc protein|TUDOR protein with multiple SNc domains, putative, expressed",-0.9515063,{"$nulls":8},30.3,"signalling.calcium","Os04g0402100","Transcript","highly similar to ( 566) AT5G61790 | Symbols: CNX1, ATCNX1 | calnexin 1 (CNX1) | chr5:24827394-24829642 REVERSEhighly similar to ( 574) CALX_SOYBN Calnexin homolog precursor - Glycine max (Soybean) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.3851147]
[null,"27.3.80","RNA.regulation of transcription.zf-HD","Os08g0438400","Transcript","very weakly similar to (85.9) AT3G28920 | Symbols: AtHB34 | AtHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor | chr3:10940598-10941536 REVERSEZF-HD_dimer protein|ZF-HD protein dimerisation region containing protein, expressed",-1.6525875,{"$nulls":8},30.3,"signalling.calcium","Os12g0556200","Transcript","moderately similar to ( 210) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-1.329944]
[null,"27.3.81","RNA.regulation of transcription.S1FA","Os04g0408700","Transcript","weakly similar to ( 102) S1FA2_ORYSA DNA-binding protein S1FA2 - Oryza sativa (Rice)S1FA protein|DNA-binding protein S1FA, putative, expressed",0.9976403,{"$nulls":8},30.3,"signalling.calcium","Os07g0568600","Transcript","highly similar to ( 805) AT5G19450 | Symbols: CDPK19, CPK8 | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:6558672-6561471 REVERSEhighly similar to ( 516) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc FRQ1 protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.2445259]
[null,"27.3.82","RNA.regulation of transcription.plant TF (pbf2)","Os06g0145800","Transcript","moderately similar to ( 271) AT2G02740 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3); DNA binding | chr2:769389-770993 FORWARDWhirly protein|whirly transcription factor domain containing protein, expressed",1.7282958,{"$nulls":8},30.3,"signalling.calcium","Os05g0197300","Transcript","moderately similar to ( 401) AT2G26190 | Symbols: | calmodulin-binding family protein | chr2:11147901-11150082 REVERSE protein|calmodulin-binding protein, putative, expressed",-1.891696]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os11g0246100","Transcript","very weakly similar to (80.1) AT1G21150 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr1:7406406-7407578 REVERSEmTERF protein|mTERF family protein, expressed",-1.2360724,{"$nulls":8},30.3,"signalling.calcium","Os03g0807400","Transcript","highly similar to ( 612) AT1G19720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:6819926-6822610 REVERSEmoderately similar to ( 325) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin family protein, expressed",1.2865318]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0118700","Transcript","weakly similar to ( 191) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE protein|aspartic protease, putative, expressed",7.5530396,{"$nulls":8},30.3,"signalling.calcium","Os01g0329800","Transcript","moderately similar to ( 250) AT1G48110 | Symbols: ECT7 | ECT7 (evolutionarily conserved C-terminal region 7) | chr1:17770339-17772806 REVERSE YTH protein|ECT protein, putative, expressed",-0.9762449]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0534800","Transcript","moderately similar to ( 201) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.4917682,{"$nulls":8},30.3,"signalling.calcium","Os12g0603800","Transcript","weakly similar to ( 160) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDweakly similar to ( 160) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCML5 - Calmodulin-related calcium sensor protein, expressed",-1.6109797]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0624900","Transcript","moderately similar to ( 226) AT1G21000 | Symbols: | zinc-binding family protein | chr1:7338013-7339088 FORWARDPLATZ protein|zinc-binding protein, putative, expressed",-1.2052364,{"$nulls":8},30.3,"signalling.calcium","Os11g0668300","Transcript","weakly similar to ( 133) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-3.3038952]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0189300","Transcript","moderately similar to ( 397) AT1G77060 | Symbols: | mutase family protein | chr1:28951804-28953449 REVERSEmoderately similar to ( 329) CPPM_DIACA Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) (Carboxyphosphonoenolpyruvate phosphonomutase) (CPEP phosphonomutase) (PSR132) - Dianthus caryophyllus (Carnation) (Clove pink) PrpB prpB protein|carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed",3.295161,{"$nulls":8},30.3,"signalling.calcium","Os08g0115200","Transcript","moderately similar to ( 252) AT4G00820 | Symbols: iqd17 | iqd17 (IQ-domain 17); calmodulin binding | chr4:349300-351307 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",1.5523863]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0637200","Transcript","moderately similar to ( 222) AT5G61190 | Symbols: | zinc finger protein-related | chr5:24615480-24619886 FORWARDDUF537 protein|expressed protein",0.95674485,{"$nulls":8},30.3,"signalling.calcium","Os04g0569900","Transcript","weakly similar to ( 106) AT4G23060 | Symbols: IQD22 | IQD22 (IQ-domain 22); calmodulin binding | chr4:12087283-12090408 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",2.0508223]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os12g0197500","Transcript","moderately similar to ( 400) AT5G23570 | Symbols: SGS3, ATSGS3 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | chr5:7943621-7945874 FORWARD protein|leafbladeless1, putative, expressed",1.5788475,{"$nulls":8},30.3,"signalling.calcium","Os01g0955100","Transcript","weakly similar to ( 114) AT1G76650 | Symbols: CML38 | calcium-binding EF hand family protein | chr1:28766909-28767442 REVERSE protein|OsCML31 - Calmodulin-related calcium sensor protein, expressed",-1.1783794]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0471800","Transcript","weakly similar to ( 181) AT1G45207 | Symbols: | remorin family protein | chr1:17130703-17133548 REVERSE protein|remorin C-terminal domain containing protein, putative, expressed",3.6115944,{"$nulls":8},30.3,"signalling.calcium","Os01g0267900","Transcript","moderately similar to ( 248) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 246) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam1-3 - Calmodulin, expressed",-0.9781513]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0515800","Transcript","moderately similar to ( 398) AT4G38160 | Symbols: pde191 | pde191 (pigment defective 191) | chr4:17902412-17903784 FORWARD mTERF protein|mTERF domain containing protein, expressed",2.3015,{"$nulls":8},30.3,"signalling.calcium","Os03g0161400","Transcript","weakly similar to ( 140) AT4G14750 | Symbols: IQD19 | IQD19 (IQ-domain 19); calmodulin binding | chr4:8470449-8471903 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",3.2118518]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0533000","Transcript","moderately similar to ( 201) AT2G03200 | Symbols: | aspartyl protease family protein | chr2:966506-967891 REVERSE Asp protein|aspartic proteinase nepenthesin precursor, putative, expressed",2.0685098,{"$nulls":8},30.3,"signalling.calcium","Os05g0535900","Transcript","weakly similar to ( 190) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",1.9528507]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os09g0423500","Transcript","moderately similar to ( 367) AT1G79720 | Symbols: | aspartyl protease family protein | chr1:29997259-29998951 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.8926609,{"$nulls":8},30.3,"signalling.calcium","Os07g0246200","Transcript","highly similar to ( 512) AT1G09210 | Symbols: | calreticulin 2 (CRT2) | chr1:2973217-2976655 REVERSEhighly similar to ( 603) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.0358893]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0125700","Transcript","moderately similar to ( 228) AT5G47110 | Symbols: | lil3 protein, putative | chr5:19134218-19135238 REVERSE protein|expressed protein",2.3285046,{"$nulls":8},30.4,"signalling.phosphinositides","Os02g0782600","Transcript","highly similar to ( 627) AT3G43220 | Symbols: | phosphoinositide phosphatase family protein | chr3:15197453-15202653 REVERSE Syja_N COG5329 protein|SAC domain containing protein, putative, expressed",-1.3563666]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os01g0598600","Transcript","moderately similar to ( 384) AT1G01300 | Symbols: | aspartyl protease family protein | chr1:117065-118522 FORWARD Asp protein|aspartic proteinase, putative, expressed",1.9372562,{"$nulls":8},30.4,"signalling.phosphinositides","Os11g0309000","Transcript","highly similar to ( 791) AT3G51460 | Symbols: RHD4 | RHD4 (ROOT HAIR DEFECTIVE4); phosphatidylinositol-4,5-bisphosphate 5-phosphatase/ phosphatidylinositol-4-phosphate phosphatase | chr3:19093007-19097142 FORWARD COG5329 Syja_N protein|SacI homology domain containing protein, expressed",1.7292427]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0481000","Transcript","moderately similar to ( 369) AT1G70150 | Symbols: | zinc ion binding | chr1:26416898-26419521 FORWARD protein|zinc finger protein, putative, expressed",1.2245995,{"$nulls":8},"30.4.1","signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase","Os09g0555600","Transcript","moderately similar to ( 440) AT1G75010 | Symbols: ARC3 | ARC3 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3) | chr1:28164994-28169941 REVERSEvery weakly similar to (82.4) PI5K1_ORYSA Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice)COG4642 protein|MORN repeat domain containing protein, expressed",1.4728194]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0749800","Transcript","weakly similar to ( 151) AT5G07900 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr5:2520188-2521405 FORWARD mTERF protein|mTERF family protein, expressed",1.5840412,{"$nulls":8},30.5,"signalling.G-proteins","Os06g0195900","Transcript","highly similar to ( 894) AT1G50920 | Symbols: | GTP-binding protein-related | chr1:18870555-18872570 FORWARD COG1084 NOG Obg_like NOGCT NOG1 protein|nucleolar GTP-binding protein 1, putative, expressed",-1.0359007]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0782100","Transcript","highly similar to ( 828) AT2G34357 | Symbols: | binding | chr2:14499236-14505555 FORWARD NUC173 protein|expressed protein",-1.1639978,{"$nulls":8},30.5,"signalling.G-proteins","Os04g0620700","Transcript","weakly similar to ( 138) AT1G48920 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid binding / nucleotide binding | chr1:18098186-18101422 FORWARD protein|nucleolin, putative, expressed",-1.1026945]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os06g0610800","Transcript","moderately similar to ( 304) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase, putative, expressed",4.0232925,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0564400","Transcript","moderately similar to ( 370) AT5G60860 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding | chr5:24484750-24485565 FORWARDmoderately similar to ( 356) RB11B_TOBAC Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab5_related Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab4 Rab14 Rab19 Rab18 Rab6 Rab39 Rab35 Rab30 Rab26 RabA_like Rab32_Rab38 Rab7 Rab21 Rab3 Rab15 Ras_like_GTPase Rab27A Ras Rab40 Rab33B_Rab33A Rab12 Rab9 COG1100 RAS Rab23_lke RJL Ras2 Rab24 Ran Rab28 M_R_Ras_like RabL2 Rap_like Rho RalA_RalB RheB RHO Rab36_Rab34 H_N_K_Ras_like Rho4_like Rap2 Rap1 RERG_RasL11_like ARHI_like RSR1 RAN RabL4 Wrch_1 Spg1 Rab20 Rho3 Rit_Rin_Ric RGK Rac1_like RhoA_like protein|ras-related protein, putative, expressed",-1.0946509]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0209500","Transcript","highly similar to ( 565) AT1G69420 | Symbols: | zinc finger (DHHC type) family protein | chr1:26093690-26096736 FORWARD COG5273 zf-DHHC protein|zinc finger family protein, putative, expressed",1.6984292,{"$nulls":8},30.5,"signalling.G-proteins","Os11g0638000","Transcript","moderately similar to ( 463) AT3G12080 | Symbols: emb2738 | emb2738 (embryo defective 2738); GTP binding | chr3:3847851-3851677 FORWARD engA COG1160 EngA2 engA PRK09518 trmE ThdF Era trmE MMR_HSR1 Era_like EngA1 era Era protein|GTP-binding protein, putative, expressed",1.5003601]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0521400","Transcript","weakly similar to ( 192) AT1G67325 | Symbols: | binding / zinc ion binding | chr1:25209825-25212412 REVERSE protein|zinc finger family protein, putative, expressed",-1.0846679,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0246800","Transcript","nearly identical (2221) AT3G60860 | Symbols: | guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD COG5307 Sec7 Sec7 Sec7 DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.0353475]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0720900","Transcript","moderately similar to ( 249) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase nepenthesin-1 precursor, putative, expressed",1.9263893,{"$nulls":8},30.5,"signalling.G-proteins","Os01g0229400","Transcript","weakly similar to ( 144) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 223) RAC1_ORYSA Rac-like GTP-binding protein 1 (OsRac1) - Oryza sativa (Rice) Rop_like RHO Rho Rho4_like Rac1_like protein|ras-related protein, putative, expressed",2.7913215]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0324100","Transcript","weakly similar to ( 121) AT3G56330 | Symbols: | N2,N2-dimethylguanosine tRNA methyltransferase family protein | chr3:20890250-20891933 FORWARD protein|N-dimethylguanosine tRNA methyltransferase, putative, expressed",1.3304576,{"$nulls":8},30.5,"signalling.G-proteins","Os07g0408500","Transcript","moderately similar to ( 375) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_ARHGAP22_24_25 RhoGAP_fBEM3 RhoGAP_ARHGAP20 RhoGap_RalBP1 protein|rhoGAP domain containing protein, expressed",1.7848724]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0520700","Transcript","moderately similar to ( 290) AT5G63830 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 339 Blast hits to 334 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 84; Plants - 29; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr5:25543585-25544802 REVERSE protein|HIT zinc finger domain containing protein, expressed",-0.9866403,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os05g0404000","Transcript","highly similar to ( 545) AT4G02990 | Symbols: | mitochondrial transcription termination factor family protein / mTERF family protein | chr4:1322158-1323783 FORWARD mTERF protein|mTERF domain containing protein, expressed",1.3906912,{"$nulls":8},30.5,"signalling.G-proteins","Os07g0408100","Transcript","moderately similar to ( 326) AT3G49180 | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3); nucleotide binding | chr3:18229810-18231874 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.52917]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0488100","Transcript","weakly similar to ( 186) AT5G23290 | Symbols: PDF5 | PDF5 (PREFOLDIN 5); unfolded protein binding | chr5:7846144-7847428 FORWARD Prefoldin_alpha Prefoldin protein|prefoldin, putative, expressed",-1.0586424,{"$nulls":8},30.5,"signalling.G-proteins","Os01g0540300","Transcript","weakly similar to ( 146) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDweakly similar to ( 167) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Tc10 Rho4_like protein|Ras family domain containing protein, expressed",2.1408327]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os03g0120200","Transcript","weakly similar to ( 143) AT2G02170 | Symbols: | remorin family protein | chr2:556595-558610 REVERSERemorin_C protein|remorin family protein, putative, expressed",2.2569926,{"$nulls":8},30.5,"signalling.G-proteins","Os02g0632500","Transcript","highly similar to ( 781) AT1G60860 | Symbols: AGD2 | AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding | chr1:22401244-22407639 REVERSE ArfGap ArfGap BAR COG5347 PH_centaurin protein|ARF GTPase-activating domain-containing protein, putative, expressed",-1.0146769]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os02g0208900","Transcript","moderately similar to ( 211) AT4G13350 | Symbols: NIG | NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | chr4:7770170-7773321 REVERSE ArfGap ArfGap protein|GTPase-activating protein, putative, expressed",-1.0023584,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0390100","Transcript","highly similar to ( 691) AT1G03160 | Symbols: FZL | FZL (FZO-LIKE); GTP binding / GTPase/ thiamin-phosphate diphosphorylase | chr1:761321-765091 FORWARD Dynamin_N Era_like protein|FZL, putative, expressed",2.6471267]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0208200","Transcript","very weakly similar to (87.0) AT4G30030 | Symbols: | aspartyl protease family protein | chr4:14682210-14683484 REVERSE protein|expressed protein",2.2369096,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0796800","Transcript","highly similar to ( 561) AT2G38840 | Symbols: | guanylate-binding family protein | chr2:16227329-16232115 FORWARD protein|GTP binding protein, putative, expressed",-0.97959137]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os10g0396300","Transcript","moderately similar to ( 395) AT5G45550 | Symbols: | mob1/phocein family protein | chr5:18462284-18464840 FORWARD Mob1_phocein protein|mps one binder kinase activator-like 1A, putative, expressed",0.97349644,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0277000","Transcript","highly similar to ( 748) AT5G09550 | Symbols: | RAB GDP-dissociation inhibitor | chr5:2963850-2966465 FORWARD GDI MRS6 protein|rab GDP dissociation inhibitor alpha, putative, expressed",2.2104716]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os07g0212200","Transcript","moderately similar to ( 476) AT3G63140 | Symbols: CSP41A | CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | chr3:23327006-23328620 REVERSEWcaG protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",2.8568566,{"$nulls":8},30.5,"signalling.G-proteins","Os07g0239400","Transcript","moderately similar to ( 242) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 244) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab11_like Rab15 Rab18 Rab3 Rab27A Rab2 Rab26 Rab4 Rab19 Rab30 RabA_like Rab5_related Rab39 Rab33B_Rab33A Rab40 Rab14 Rab6 Rab21 Rab7 Rab12 Ras_like_GTPase RJL Ras Rab32_Rab38 Rab9 COG1100 RAS Rho Rab23_lke Rap_like Rab28 Rab36_Rab34 Rab24 RHO RabL4 M_R_Ras_like Rap2 RERG_RasL11_like RalA_RalB H_N_K_Ras_like Rap1 RheB RSR1 Ras2 Ran Rit_Rin_Ric Rho4_like RabL2 Wrch_1 RhoA_like Spg1 Rac1_like ARHI_like Tc10 Rho2 RhoG RAN Miro Rop_like RGK protein|ras-related protein, putative, expressed",-1.0277327]
[null,"27.3.99","RNA.regulation of transcription.unclassified","Os08g0504700","Transcript","weakly similar to ( 108) AT3G12630 | Symbols: | zinc finger (AN1-like) family protein | chr3:4012707-4013189 FORWARDweakly similar to ( 156) ISAP1_ORYSA Multiple stress-responsive zinc-finger protein ISAP1 (Stress-associated protein 1) (OsISAP1) - Oryza sativa (Rice) protein|AN1-like zinc finger domain containing protein, expressed",-1.1219383,{"$nulls":8},30.5,"signalling.G-proteins","Os02g0312600","Transcript","moderately similar to ( 342) AT4G35020 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase | chr4:16673176-16674540 FORWARDmoderately similar to ( 398) RAC7_ORYSA Rac-like GTP-binding protein 7 (OsRac7) (GTPase protein ROP5) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Rnd2_Rho7 Rnd1_Rho6 Rnd3_RhoE_Rho8 Ras_like_GTPase RAS COG1100 Rab21 Rab5_related H_N_K_Ras_like Rab6 M_R_Ras_like Rab8_Rab10_Rab13_like RhoBTB Rab18 Ras2 Rab11_like Rab7 RalA_RalB Rab1_Ypt1 Rap_like RheB Rab23_lke Rab19 RSR1 Rab9 Rab2 Rab27A Rab26 Rab4 RERG_RasL11_like Rap2 Rit_Rin_Ric Rap1 Rab24 Rab39 Rab3 Miro1 Rab15 Ran Rab36_Rab34 Rab14 Rab30 RabA_like Rab35 RabL2 Rab33B_Rab33A RabL4 protein|ras-related protein, putative, expressed",2.2597425]
[null,27.4,"RNA.RNA binding","Os08g0139000","Transcript","weakly similar to ( 132) AT5G54580 | Symbols: | RNA recognition motif (RRM)-containing protein | chr5:22171332-22172656 FORWARD protein|RNA recognition motif containing protein, putative, expressed",-1.2559347,{"$nulls":8},30.5,"signalling.G-proteins","Os08g0364900","Transcript","moderately similar to ( 282) AT2G43120 | Symbols: | pirin, putative | chr2:17927339-17928871 FORWARDCOG1741 Pirin Pirin_C protein|pirin, putative, expressed",-1.9497353]
[null,27.4,"RNA.RNA binding","Os05g0102800","Transcript","moderately similar to ( 426) AT5G07290 | Symbols: AML4 | AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA binding / nucleic acid binding / nucleotide binding | chr5:2294248-2298491 FORWARDweakly similar to ( 124) PLA2_ORYSA Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) RRM_2 protein|AML1, putative, expressed",0.9903318,{"$nulls":8},30.5,"signalling.G-proteins","Os02g0668500","Transcript","weakly similar to ( 182) AT4G35750 | Symbols: | Rho-GTPase-activating protein-related | chr4:16940865-16941674 REVERSE protein|rho-GTPase-activating protein-related, putative, expressed",1.8131456]
[null,27.4,"RNA.RNA binding","Os07g0631900","Transcript","moderately similar to ( 233) AT2G37220 | Symbols: | 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15634980-15636331 REVERSEmoderately similar to ( 240) ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) COG0724 RRM protein|RNA recognition motif containing protein, putative, expressed",2.3548837,{"$nulls":8},30.5,"signalling.G-proteins","Os12g0155200","Transcript","moderately similar to ( 388) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_fBEM3 protein|rhoGAP domain containing protein, expressed",1.116347]
[null,27.4,"RNA.RNA binding","Os11g0237700","Transcript","weakly similar to ( 175) AT1G55140 | Symbols: | RNA binding / ribonuclease III | chr1:20572788-20574332 REVERSECOG1939 protein|RNA binding protein, putative, expressed",1.082571,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0843100","Transcript","moderately similar to ( 309) AT1G09630 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding | chr1:3118350-3119571 REVERSEmoderately similar to ( 291) YPTC6_CHLRE Ras-related protein YPTC6 - Chlamydomonas reinhardtii Rab11_like RAB Ras Rab Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab5_related Rab4 Rab19 Rab14 Rab18 Rab39 Rab35 Rab30 Rab6 RabA_like Rab21 Rab7 Rab32_Rab38 Rab26 Rab3 Rab12 Rab27A Ras_like_GTPase Rab33B_Rab33A Rab15 Rab40 Rab9 COG1100 Ras RJL Rab24 RAS Rab28 RabL2 Rab23_lke M_R_Ras_like Rab36_Rab34 RalA_RalB RheB Rho Ran Rap_like Ras2 RHO H_N_K_Ras_like Rho4_like RSR1 RabL4 RERG_RasL11_like Rap2 Rit_Rin_Ric Spg1 Wrch_1 Rap1 Rab20 ARHI_like RAN Rop_like Rac1_like RGK Ras_dva protein|ras-related protein, putative, expressed",-1.0404965]
[null,27.4,"RNA.RNA binding","Os01g0101600","Transcript","moderately similar to ( 315) AT3G23900 | Symbols: | RNA recognition motif (RRM)-containing protein | chr3:8632717-8635852 REVERSEIG_FLMN Filamin protein|RNA recognition motif, putative, expressed",2.462802,{"$nulls":8},30.5,"signalling.G-proteins","Os02g0702600","Transcript","moderately similar to ( 463) AT1G31650 | Symbols: ATROPGEF14, ROPGEF14 | ROPGEF14; Rho guanyl-nucleotide exchange factor | chr1:11326474-11329767 REVERSEPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",4.0011487]
[null,27.4,"RNA.RNA binding","Os12g0109900","Transcript","weakly similar to ( 189) AT1G09700 | Symbols: HYL1, DRB1 | HYL1 (HYPONASTIC LEAVES 1); double-stranded RNA binding / miRNA binding / protein binding | chr1:3137960-3140118 REVERSE protein|double-stranded RNA binding motif containing protein, expressed",-1.1898848,{"$nulls":8},30.5,"signalling.G-proteins","Os10g0377400","Transcript","moderately similar to ( 332) AT5G65270 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding | chr5:26083437-26084550 FORWARDmoderately similar to ( 343) RB11D_TOBAC Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab2 Rab4 Rab5_related Rab1_Ypt1 Rab8_Rab10_Rab13_like Rab14 Rab19 Rab18 Rab6 Rab39 Rab30 Rab35 RabA_like Rab26 Rab7 Rab21 Rab3 Rab32_Rab38 Rab27A Rab33B_Rab33A Ras Ras_like_GTPase Rab15 Rab40 Rab12 RAS Rab9 COG1100 RJL Rab23_lke Rab28 RheB Rab24 Rab36_Rab34 RalA_RalB M_R_Ras_like Rap_like RabL2 Rho Ran Ras2 H_N_K_Ras_like RSR1 Rap1 RERG_RasL11_like Rit_Rin_Ric RabL4 RHO Spg1 ARHI_like Rap2 Rho4_like Rab20 RAN Wrch_1 RGK RhoA_like protein|ras-related protein, putative, expressed",-1.4349331]
[null,27.4,"RNA.RNA binding","Os09g0508500","Transcript","moderately similar to ( 229) AT3G26932 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3); RNA binding / double-stranded RNA binding | chr3:9930460-9931714 REVERSE protein|double-stranded RNA binding motif containing protein, expressed",1.3933849,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0513800","Transcript","moderately similar to ( 358) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 438) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Ras_like_GTPase Rnd3_RhoE_Rho8 Rnd2_Rho7 COG1100 Rnd1_Rho6 RAS Rab21 Rab5_related H_N_K_Ras_like Rab6 Rab8_Rab10_Rab13_like Rab7 Rab18 Rab1_Ypt1 M_R_Ras_like Rab9 Rab11_like Rap_like RheB Rab23_lke RhoBTB RalA_RalB Ras2 RSR1 Rab27A Rab2 Rab19 Ran Rap1 Rab4 Rab26 Rap2 Rab39 RERG_RasL11_like Rit_Rin_Ric Rab14 Rab24 Rab3 Miro1 Rab15 RabA_like Rab35 Rab36_Rab34 Rab30 Rab32_Rab38 RJL RabL2 protein|ras-related protein, putative, expressed",3.4570682]
[null,27.4,"RNA.RNA binding","Os01g0721900","Transcript","very weakly similar to (95.9) AT4G16830 | Symbols: | nuclear RNA-binding protein (RGGA) | chr4:9470652-9472308 FORWARD protein|plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed",-0.9586089,{"$nulls":8},30.5,"signalling.G-proteins","Os02g0638900","Transcript","moderately similar to ( 402) AT3G15470 | Symbols: | WD-40 repeat family protein | chr3:5216630-5219868 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.129971]
[null,27.4,"RNA.RNA binding","Os08g0483200","Transcript","weakly similar to ( 153) AT4G09040 | Symbols: | RNA recognition motif (RRM)-containing protein | chr4:5795075-5797193 REVERSEweakly similar to ( 104) ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) protein|RNA recognition motif containing protein, putative, expressed",1.2590462,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0819900","Transcript","moderately similar to ( 288) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 286) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab26 Rab11_like Rab18 Rab3 Rab2 RabA_like Rab4 Rab15 Rab27A Rab5_related Rab19 Rab30 Rab39 Rab14 Rab21 Rab7 Rab33B_Rab33A Rab6 Rab40 Rab12 Ras_like_GTPase Ras Rab32_Rab38 RJL RAS Rho Rap_like Rab9 COG1100 RalA_RalB Rab23_lke RHO H_N_K_Ras_like Rab36_Rab34 M_R_Ras_like Rab28 Rap1 Rab24 Ras2 Rap2 RSR1 RabL4 Ran RheB RERG_RasL11_like Rho4_like Rit_Rin_Ric Wrch_1 RhoA_like RabL2 ARHI_like Rac1_like Spg1 RAN RGK Rho2 Tc10 Rop_like RhoG Rab20 Miro protein|ras-related protein, putative, expressed",-1.2907563]
[null,27.4,"RNA.RNA binding","Os06g0724600","Transcript","weakly similar to ( 117) AT4G35785 | Symbols: | nucleic acid binding / nucleotide binding | chr4:16953708-16955127 REVERSERRM protein|RNA recognition motif containing protein, expressed",-1.1643081,{"$nulls":8},30.5,"signalling.G-proteins","Os06g0551400","Transcript","moderately similar to ( 362) AT4G18800 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding | chr4:10320156-10321339 REVERSEmoderately similar to ( 414) RIC2_ORYSA Ras-related protein RIC2 - Oryza sativa (Rice) Rab11_like RAB Ras Rab Rab2 Rab5_related Rab4 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab14 Rab18 Rab19 Rab39 RabA_like Rab6 Rab30 Rab35 Rab26 Rab7 Rab21 Rab32_Rab38 Rab33B_Rab33A Rab3 Rab27A Rab15 Ras_like_GTPase Rab40 Rab9 Ras Rab12 COG1100 RAS Rab23_lke RJL RabL2 Rho Rab24 RHO Rab36_Rab34 Ras2 Rap_like RalA_RalB M_R_Ras_like Ran Rab28 RheB Rho4_like RERG_RasL11_like Wrch_1 RabL4 Rap2 H_N_K_Ras_like Rap1 RSR1 ARHI_like Spg1 RhoG Rac1_like Rho3 RhoA_like RGK Rab20 Rho2 Rit_Rin_Ric RAN Miro Rop_like protein|ras-related protein, putative, expressed",-1.1777105]
[null,27.4,"RNA.RNA binding","Os04g0591000","Transcript","weakly similar to ( 125) AT2G35410 | Symbols: | 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative | chr2:14898341-14899590 FORWARD RRM protein|RNA recognition motif containing protein, putative, expressed",2.128839,{"$nulls":8},30.5,"signalling.G-proteins","Os06g0622800","Transcript","highly similar to ( 675) AT4G38200 | Symbols: | guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.1607436]
[null,27.4,"RNA.RNA binding","Os08g0521400","Transcript","weakly similar to ( 192) AT1G67325 | Symbols: | binding / zinc ion binding | chr1:25209825-25212412 REVERSE protein|zinc finger family protein, putative, expressed",-1.0846679,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0823700","Transcript","moderately similar to ( 359) AT1G07410 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding | chr1:2276270-2277154 FORWARDmoderately similar to ( 365) RB11C_LOTJA Ras-related protein Rab11C - Lotus japonicus Rab11_like RAB Ras Rab Rab8_Rab10_Rab13_like Rab2 Rab5_related Rab4 Rab1_Ypt1 Rab14 Rab19 Rab18 Rab39 Rab6 Rab35 Rab30 Rab26 RabA_like Rab21 Rab15 Rab3 Rab27A Rab7 Rab32_Rab38 Rab12 Ras_like_GTPase Ras Rab33B_Rab33A RJL Rab40 RAS Rab9 COG1100 Rab23_lke RalA_RalB Rab24 Ras2 RheB RabL2 M_R_Ras_like Rap_like Rab28 RERG_RasL11_like Rab36_Rab34 H_N_K_Ras_like Rho Ran RSR1 RabL4 Rap1 RHO Rap2 Rho4_like Spg1 ARHI_like Rit_Rin_Ric Wrch_1 Rab20 RAN Miro RGK RhoA_like protein|ras-related protein, putative, expressed",-1.1662737]
[null,27.4,"RNA.RNA binding","Os02g0714000","Transcript","moderately similar to ( 211) AT1G76460 | Symbols: | RNA recognition motif (RRM)-containing protein | chr1:28686932-28688506 REVERSE protein|RNA recognition motif containing protein, putative, expressed",-0.95488614,{"$nulls":8},30.5,"signalling.G-proteins","Os11g0153400","Transcript","moderately similar to ( 376) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",2.5257094]
[null,27.4,"RNA.RNA binding","Os11g0109900","Transcript","weakly similar to ( 185) AT1G09700 | Symbols: HYL1, DRB1 | HYL1 (HYPONASTIC LEAVES 1); double-stranded RNA binding / miRNA binding / protein binding | chr1:3137960-3140118 REVERSE protein|double-stranded RNA binding motif containing protein, expressed",-1.3773346,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0567300","Transcript","moderately similar to ( 326) AT5G66470 | Symbols: | GTP binding / RNA binding | chr5:26541986-26544302 REVERSE era Era Era engA COG1160 MMR_HSR1 EngA1 Era_like ThdF trmE EngA2 trmE Obg_like YihA_EngB Obg protein|GTP-binding protein, putative, expressed",1.4644338]
[null,27.4,"RNA.RNA binding","Os05g0120100","Transcript","weakly similar to ( 199) AT2G37340 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding | chr2:15670372-15672331 REVERSE protein|splicing factor, arginine/serine-rich 7, putative, expressed",-0.9787833,{"$nulls":8},30.5,"signalling.G-proteins","Os05g0454200","Transcript","very weakly similar to (95.9) AT5G05940 | Symbols: ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide exchange factor | chr5:1786028-1788363 FORWARDPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",3.3420017]
[null,27.4,"RNA.RNA binding","Os02g0815200","Transcript","moderately similar to ( 276) AT1G60000 | Symbols: | 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr1:22093704-22094540 REVERSEweakly similar to ( 154) ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) COG0724 RRM RRM_1 protein|RNA recognition motif containing protein, putative, expressed",4.7087307,{"$nulls":8},30.5,"signalling.G-proteins","Os01g0621300","Transcript","moderately similar to ( 218) AT2G46380 | Symbols: | unknown protein | chr2:19039377-19042171 FORWARD protein|extra-large G-protein-related, putative, expressed",0.98546124]
[null,27.4,"RNA.RNA binding","Os01g0886300","Transcript","moderately similar to ( 246) AT1G09660 | Symbols: | KH domain-containing quaking protein, putative | chr1:3128205-3130791 REVERSE SF1_like-KH MSL5 protein|KH domain containing protein, putative, expressed",-0.98212814,{"$nulls":8},30.5,"signalling.G-proteins","Os12g0533400","Transcript","moderately similar to ( 404) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP_fBEM3 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",1.8788124]
[null,27.4,"RNA.RNA binding","Os09g0527500","Transcript","weakly similar to ( 109) AT1G76940 | Symbols: | RNA recognition motif (RRM)-containing protein | chr1:28902707-28904085 REVERSE protein|RNA recognition motif containing protein, putative, expressed",-1.0800165,{"$nulls":8},30.5,"signalling.G-proteins","Os03g0781000","Transcript","highly similar to ( 540) AT1G56050 | Symbols: | GTP-binding protein-related | chr1:20963793-20966181 FORWARD PRK09601 YchF COG0012 Obg_like DUF933 TGS_YchF_C PRK09602 Ygr210 Obg Obg obgE obgE MMR_HSR1 DRG protein|GTP-binding protein, putative, expressed",1.9863502]
[{"$nulls":15},30.6,"signalling.MAP kinases","Os04g0430200","Transcript","moderately similar to ( 474) AT1G49740 | Symbols: | phospholipase C/ phosphoric diester hydrolase | chr1:18407728-18409468 FORWARD protein|phospholipase C, putative, expressed",2.148569]
[null,28.1,"DNA.synthesis/chromatin structure","Os03g0238300","Transcript","moderately similar to ( 370) AT2G01900 | Symbols: | endonuclease/exonuclease/phosphatase family protein | chr2:406136-408933 FORWARD IPPc COG5411 Exo_endo_phos protein|endonuclease/exonuclease/phosphatase family domain containing protein, expressed",-1.3839077,{"$nulls":8},30.7,"signalling.14-3-3 proteins","Os11g0609600","Transcript","moderately similar to ( 221) AT1G22300 | Symbols: GRF10, GF14 EPSILON | GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding | chr1:7879601-7881103 REVERSEmoderately similar to ( 429) 14338_ORYSA Putative 14-3-3-like protein GF14-H (G-box factor 14-3-3 homolog H) - Oryza sativa (Rice) 14-3-3 BMH1 14_3_3 protein|14-3-3 protein, putative, expressed",1.402659]
[null,28.1,"DNA.synthesis/chromatin structure","Os07g0647900","Transcript","highly similar to ( 593) AT3G09720 | Symbols: | DEAD/DEAH box helicase, putative | chr3:2980483-2983268 REVERSEweakly similar to ( 194) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 PRK11192 PRK01297 PRK04837 DEADc PRK11634 PRK04537 DEAD DEXDc HELICc RecQ Lhr DEXDc COG1205 HELICc Helicase_C COG1204 protein|DEAD/DEAH box helicase domain containing protein, expressed",-1.075765,{"$nulls":8},30.9,"signalling.lipids","Os02g0124800","Transcript","moderately similar to ( 426) AT1G64720 | Symbols: CP5 | CP5 | chr1:24046887-24048537 REVERSE START protein|membrane related protein CP5, putative, expressed",1.7873182]
[null,28.1,"DNA.synthesis/chromatin structure","Os01g0256800","Transcript","highly similar to ( 940) AT2G47680 | Symbols: | zinc finger (CCCH type) helicase family protein | chr2:19545828-19550871 REVERSE HrpA PRK11131 PRK11664 DEXHc protein|zinc finger helicase family protein, putative, expressed",1.3073591,{"$nulls":8},30.1,"signalling.phosphorelay","Os05g0521300","Transcript","very weakly similar to (90.1) AT3G16360 | Symbols: AHP4 | AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | chr3:5554484-5555367 FORWARD protein|histidine-containing phosphotransfer protein, putative, expressed",1.5769591]
[null,28.1,"DNA.synthesis/chromatin structure","Os05g0539700","Transcript","moderately similar to ( 375) AT5G56950 | Symbols: NFA03, NFA3, NAP1;3 | NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding | chr5:23032618-23035299 FORWARD NAP protein|NAP domain containing protein, putative, expressed",-0.98944664,{"$nulls":8},30.1,"signalling.phosphorelay","Os01g0743800","Transcript","weakly similar to ( 153) AT3G16360 | Symbols: AHP4 | AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | chr3:5554484-5555367 FORWARDweakly similar to ( 102) HP1_ORYSA Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) protein|histidine-containing phosphotransfer protein, putative, expressed",-1.4168855]
[null,28.1,"DNA.synthesis/chromatin structure","Os03g0669000","Transcript","highly similar to ( 533) AT5G60990 | Symbols: | DEAD/DEAH box helicase, putative (RH10) | chr5:24546601-24549148 REVERSEmoderately similar to ( 208) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK11192 PRK11634 PRK10590 DEADc PRK01297 PRK04537 PRK04837 DEAD DEXDc DEXDc HELICc Lhr Helicase_C COG1205 HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.0285134,{"$nulls":8},30.11,"signalling.light","Os12g0583500","Transcript","highly similar to ( 582) AT2G14820 | Symbols: NPY2 | NPY2 (NAKED PINS IN YUC MUTANTS 2); protein binding / signal transducer | chr2:6358864-6361300 FORWARDmoderately similar to ( 332) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",2.7286224]
[null,28.1,"DNA.synthesis/chromatin structure","Os01g0970600","Transcript","highly similar to ( 543) AT5G19210 | Symbols: | DEAD/DEAH box helicase, putative | chr5:6462100-6463687 FORWARDweakly similar to ( 127) IF4A8_TOBAC Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) SrmB PRK11776 PRK04837 PRK11192 PRK01297 DEADc PRK10590 PRK11634 PRK04537 DEAD DEXDc DEXDc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",1.3733307,{"$nulls":8},30.11,"signalling.light","Os02g0573200","Transcript","highly similar to ( 807) AT4G08920 | Symbols: CRY1, BLU1, HY4, OOP2, ATCRY1 | CRY1 (CRYPTOCHROME 1); ATP binding / blue light photoreceptor/ protein homodimerization/ protein kinase | chr4:5724260-5726905 FORWARDhighly similar to ( 578) PHR1_SINAL Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) PhrB FAD_binding_7 PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",1.6562303]
[null,28.1,"DNA.synthesis/chromatin structure","Os06g0697200","Transcript","highly similar to ( 789) AT5G51280 | Symbols: | DEAD-box protein abstrakt, putative | chr5:20841456-20843645 FORWARDmoderately similar to ( 239) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11776 PRK10590 DEADc PRK11192 PRK04837 PRK01297 PRK11634 PRK04537 DEAD DEXDc HELICc DEXDc Lhr Helicase_C HELICc RecQ protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-2.5212672,{"$nulls":8},30.11,"signalling.light","Os02g0594700","Transcript","moderately similar to ( 438) AT1G67900 | Symbols: | phototropic-responsive NPH3 family protein | chr1:25467737-25469888 FORWARDweakly similar to ( 184) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",4.573135]
[null,28.1,"DNA.synthesis/chromatin structure","Os02g0699700","Transcript","nearly identical (1529) AT3G23890 | Symbols: TOPII, ATTOPII | TOPII (TOPOISOMERASE II); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ DNA topoisomerase/ DNA-dependent ATPase | chr3:8624931-8631106 FORWARDnearly identical (1503) TOP2_PEA DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) TOP2c TOP4c GyrB TOP4c DNA_topoisoIV GyrA TOPRIM_TopoIIA PRK05559 TopoIIA_Trans_ScTopoIIA TOPRIM_TopoIIA_like gyrB DNA_gyraseB PRK09631 TOPRIM_TopoIIA_GyrB PRK09630 PRK05561 PRK05560 protein|DNA topoisomerase 2, putative, expressed",1.558035,{"$nulls":8},30.11,"signalling.light","Os03g0205700","Transcript","highly similar to ( 553) AT2G14820 | Symbols: NPY2 | NPY2 (NAKED PINS IN YUC MUTANTS 2); protein binding / signal transducer | chr2:6358864-6361300 FORWARDmoderately similar to ( 319) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",3.6300719]
[null,28.1,"DNA.synthesis/chromatin structure","Os08g0416100","Transcript","highly similar to ( 835) AT1G77030 | Symbols: | ATP binding / ATP-dependent helicase/ RNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding | chr1:28947492-28951526 REVERSEmoderately similar to ( 213) DB10_NICSY ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) SrmB PRK11192 PRK11776 DEADc PRK04837 PRK10590 PRK04537 PRK01297 PRK11634 DEAD DEXDc DEXDc Lhr COG1205 HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-0.951838,{"$nulls":8},30.11,"signalling.light","Os03g0767600","Transcript","highly similar to ( 523) AT5G66560 | Symbols: | phototropic-responsive NPH3 family protein | chr5:26564368-26566662 FORWARDmoderately similar to ( 228) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed",1.6035231]
[null,28.1,"DNA.synthesis/chromatin structure","Os02g0817800","Transcript","moderately similar to ( 239) AT1G07540 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2); DNA binding | chr1:2318433-2321048 REVERSE protein|MYB family transcription factor, putative, expressed",1.8248959,{"$nulls":8},30.11,"signalling.light","Os10g0381800","Transcript","moderately similar to ( 222) AT4G38180 | Symbols: FRS5 | FRS5 (FAR1-related sequence 5); zinc ion binding | chr4:17906702-17909404 REVERSE protein|transposon protein, putative, unclassified, expressed",-1.0341378]
[null,28.1,"DNA.synthesis/chromatin structure","Os09g0573000","Transcript","moderately similar to ( 330) AT5G40405 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G66520.1); Has 12548 Blast hits to 5076 proteins in 168 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants - 12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). | chr5:16169315-16171153 FORWARD IPPc protein|expressed protein",1.0080684,{"$nulls":8},30.11,"signalling.light","Os06g0475800","Transcript","weakly similar to ( 149) AT4G38180 | Symbols: FRS5 | FRS5 (FAR1-related sequence 5); zinc ion binding | chr4:17906702-17909404 REVERSE protein|transposon protein, putative, unclassified, expressed",1.7737304]
[null,28.1,"DNA.synthesis/chromatin structure","Os12g0289600","Transcript","moderately similar to ( 327) AT4G24790 | Symbols: | ATP binding / DNA binding / DNA-directed DNA polymerase | chr4:12778222-12781345 FORWARD DnaX PRK05563 PRK07133 PRK05896 PRK09111 PRK07270 PRK06674 PRK06305 PRK06645 PRK06647 PRK08451 PRK07994 PRK07003 PRK12323 PRK08853 PRK08691 PRK05648 PRK06872 PRK08770 protein|ATP binding protein, putative, expressed",2.0825467,{"$nulls":8},30.11,"signalling.light","Os07g0546400","Transcript","moderately similar to ( 259) AT3G22104 | Symbols: | phototropic-responsive NPH3 protein-related | chr3:7789814-7792179 FORWARDweakly similar to ( 110) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed",2.5183604]
[null,28.1,"DNA.synthesis/chromatin structure","Os07g0685500","Transcript","moderately similar to ( 377) AT5G17780 | Symbols: | hydrolase, alpha/beta fold family protein | chr5:5867429-5868976 REVERSE Abhydrolase_1 MhpC protein|hydrolase, alpha/beta fold family domain containing protein, expressed",4.135945,{"$nulls":8},30.11,"signalling.light","Os04g0477000","Transcript","moderately similar to ( 438) AT1G67900 | Symbols: | phototropic-responsive NPH3 family protein | chr1:25467737-25469888 FORWARDweakly similar to ( 182) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",2.1908932]
[null,28.1,"DNA.synthesis/chromatin structure","Os03g0214100","Transcript","highly similar to ( 784) AT5G08020 | Symbols: ATRPA70B, RPA70B | RPA70B (RPA70-KDA SUBUNIT B); DNA binding / nucleic acid binding | chr5:2572107-2574879 FORWARDRep_fac-A_C RPA1_DBD_C RPA1_DBD_A RPA1_DBD_B Rep-A_N RPA1N protein|RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed",-1.4651551,{"$nulls":8},"30.11.1","signalling.light.COP9 signalosome","Os03g0861100","Transcript","moderately similar to ( 229) AT5G43310 | Symbols: | COP1-interacting protein-related | chr5:17379735-17385387 REVERSE protein|expressed protein",1.8487477]
[null,28.1,"DNA.synthesis/chromatin structure","Os04g0569000","Transcript","highly similar to ( 588) AT1G63160 | Symbols: | replication factor C 40 kDa, putative | chr1:23422068-23423771 REVERSE rfc PRK04132 PRK12402 HolB PRK04195 DnaX Rep_fac_C PRK07133 PRK05896 MGS1 PRK08451 protein|RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed",-1.3981885,{"$nulls":8},30.99,"signalling.unspecified","Os03g0256800","Transcript","moderately similar to ( 258) AT5G19390 | Symbols: | pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein | chr5:6531906-6537143 FORWARD protein|PH domain containing protein, expressed",-1.7005287]
[null,28.1,"DNA.synthesis/chromatin structure","Os08g0120200","Transcript","moderately similar to ( 385) AT4G24790 | Symbols: | ATP binding / DNA binding / DNA-directed DNA polymerase | chr4:12778222-12781345 FORWARD DnaX PRK07133 PRK08451 PRK05563 PRK06305 PRK05896 PRK07270 PRK06674 PRK08691 PRK06647 PRK06872 PRK07994 PRK08770 PRK07003 PRK12323 PRK08853 PRK05648 PRK07764 PRK06645 PRK09111 HolB rfc PRK12402 protein|ATP binding protein, putative, expressed",1.364872]
[null,28.1,"DNA.synthesis/chromatin structure","Os02g0146600","Transcript","highly similar to ( 766) AT3G13920 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | chr3:4592635-4594094 REVERSEhighly similar to ( 812) IF4A_ORYSA Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) SrmB PRK11776 DEADc PRK11634 PRK11192 PRK10590 PRK01297 PRK04837 PRK04537 DEAD DEXDc HELICc DEXDc Lhr HELICc Helicase_C RecQ COG1205 protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.1400763,{"$nulls":8},34,"transport","Os09g0346400","Transcript","moderately similar to ( 270) AT4G27500 | Symbols: PPI1 | PPI1 (PROTON PUMP INTERACTOR 1); protein binding | chr4:13743614-13745900 FORWARD protein|proton pump interactor, putative, expressed",-1.2646421]
[null,28.1,"DNA.synthesis/chromatin structure","Os12g0414900","Transcript","moderately similar to ( 340) AT1G11800 | Symbols: | endonuclease/exonuclease/phosphatase family protein | chr1:3985520-3987263 REVERSE protein|endonuclease/Exonuclease/phosphatase family protein, expressed",1.0148546,{"$nulls":8},34.1,"transport.p- and v-ATPases","Os03g0100800","Transcript","nearly identical (1389) AT5G62670 | Symbols: AHA11 | AHA11 (Arabidopsis H(+)-ATPase 11); ATPase | chr5:25159495-25164957 FORWARDnearly identical (1397) PMA1_NICPL Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) MgtA PRK10517 ZntA E1-E2_ATPase KdpB PRK01122 zntA PRK10671 protein|E1-E2 ATPase domain containing protein, expressed",3.1755283]
[null,28.1,"DNA.synthesis/chromatin structure","Os04g0408600","Transcript","weakly similar to ( 116) AT2G36410 | Symbols: | unknown protein | chr2:15279041-15280270 FORWARDDUF662 protein|expressed protein",5.978925,{"$nulls":8},34.1,"transport.p- and v-ATPases","Os05g0100600","Transcript","nearly identical (1536) AT3G25610 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr3:9308942-9313353 REVERSE MgtA protein|phospholipid-transporting ATPase, putative, expressed",-1.4096457]
[null,28.1,"DNA.synthesis/chromatin structure","Os01g0801000","Transcript","moderately similar to ( 495) AT2G41460 | Symbols: ARP | ARP; DNA-(apurinic or apyrimidinic site) lyase | chr2:17285731-17288041 FORWARDmoderately similar to ( 230) APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) XthA Exo_endo_phos PRK11756 protein|apurinic endonuclease-redox protein, putative, expressed",1.2658134,{"$nulls":8},"34.1.1.3","transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D","Os04g0643100","Transcript","moderately similar to ( 360) AT3G58730 | Symbols: | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | chr3:21718495-21719280 REVERSE ATP-synt_D NtpD PRK00373 protein|vacuolar ATP synthase subunit D 1, putative, expressed",-1.5294367]
[null,28.1,"DNA.synthesis/chromatin structure","Os09g0487200","Transcript","highly similar to ( 541) AT2G42320 | Symbols: | nucleolar protein gar2-related | chr2:17628102-17630657 FORWARD protein|expressed protein",2.6139994,{"$nulls":8},34.2,"transport.sugars","Os03g0137500","Transcript","moderately similar to ( 268) AT5G57490 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel | chr5:23283895-23285335 REVERSEmoderately similar to ( 236) VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) Porin_3 protein|outer mitochondrial membrane porin, putative, expressed",-1.0140386]
[null,28.1,"DNA.synthesis/chromatin structure","Os03g0169800","Transcript","moderately similar to ( 220) AT3G47490 | Symbols: | HNH endonuclease domain-containing protein | chr3:17498337-17500731 FORWARD protein|HNH endonuclease domain-containing protein, putative, expressed",1.6628205,{"$nulls":8},34.2,"transport.sugars","Os03g0363500","Transcript","moderately similar to ( 493) AT5G18840 | Symbols: | sugar transporter, putative | chr5:6282954-6286399 FORWARDweakly similar to ( 140) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",2.3389091]
[null,28.1,"DNA.synthesis/chromatin structure","Os03g0728800","Transcript","highly similar to ( 541) AT4G34910 | Symbols: | DEAD/DEAH box helicase, putative (RH16) | chr4:16631661-16634834 FORWARDweakly similar to ( 125) IF4A7_TOBAC Eukaryotic initiation factor 4A-7 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) - Nicotiana tabacum (Common tobacco) SrmB PRK11776 PRK11192 PRK04837 PRK10590 DEADc PRK01297 PRK11634 DEAD DEXDc PRK04537 DEXDc HELICc protein|DEAD-box ATP-dependent RNA helicase, putative, expressed",-1.0667939,{"$nulls":8},34.2,"transport.sugars","Os02g0573500","Transcript","moderately similar to ( 458) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 444) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.4872049]
[null,28.1,"DNA.synthesis/chromatin structure","Os08g0101600","Transcript","moderately similar to ( 486) AT3G48900 | Symbols: | DNA binding / catalytic/ chromatin binding / nuclease | chr3:18131854-18136239 FORWARD XPG PRK03980 XPG_I protein|flap endonuclease, putative, expressed",1.1028924,{"$nulls":8},34.2,"transport.sugars","Os04g0452700","Transcript","highly similar to ( 509) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 465) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.9885241]
[null,28.1,"DNA.synthesis/chromatin structure","Os07g0659500","Transcript","nearly identical (1552) AT3G57060 | Symbols: | binding | chr3:21115078-21121051 REVERSE COG5098 protein|condensin complex subunit 1, putative, expressed",3.2362716,{"$nulls":8},34.2,"transport.sugars","Os02g0604300","Transcript","highly similar to ( 571) AT3G59360 | Symbols: UTR6, ATUTR6 | UTR6 (UDP-GALACTOSE TRANSPORTER 6); nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter | chr3:21935826-21939642 REVERSE Nuc_sug_transp protein|nucleotide-sugar transporter family protein, putative, expressed",-0.9878022]
[null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os02g0801700","Transcript","very weakly similar to (81.6) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDweakly similar to ( 124) TRAC9_MAIZE Putative AC9 transposase - Zea mays (Maize) hATC protein|transposon protein, putative, unclassified, expressed",1.7780298,{"$nulls":8},34.2,"transport.sugars","Os04g0454200","Transcript","moderately similar to ( 467) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 435) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",6.1641135]
[null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os01g0105300","Transcript","very weakly similar to (87.0) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDweakly similar to ( 130) TRAC9_MAIZE Putative AC9 transposase - Zea mays (Maize) hATC protein|transposon protein, putative, unclassified, expressed",1.3889304,{"$nulls":8},34.2,"transport.sugars","Os03g0197100","Transcript","highly similar to ( 567) AT3G18830 | Symbols: ATPLT5 | ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ mann | chr3:6489000-6491209 REVERSEweakly similar to ( 158) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",4.3881907]
[null,"28.1.1.4","DNA.synthesis/chromatin structure.retrotransposon/transposase.hat-like transposase","Os03g0822100","Transcript","moderately similar to ( 266) AT3G42170 | Symbols: | DNA binding | chr3:14321838-14323928 FORWARDmoderately similar to ( 254) TRA1_MAIZE Putative AC transposase (ORFA) - Zea mays (Maize) protein|transposon protein, putative, unclassified, expressed",1.5859027,{"$nulls":8},34.2,"transport.sugars","Os09g0361500","Transcript","highly similar to ( 523) AT1G18870 | Symbols: ICS2 | ICS2 (ISOCHORISMATE SYNTHASE 2); isochorismate synthase | chr1:6515746-6519176 FORWARDhighly similar to ( 504) VDAC1_ORYSA Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Oryza sativa (Rice) Porin_3 MenF PRK07054 Chorismate_bind TrpE PRK06923 PRK06404 PRK05940 PRK09070 protein|isochorismate synthase 1, chloroplast precursor, putative, expressed",3.756293]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os08g0427700","Transcript","weakly similar to ( 138) AT4G27230 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding | chr4:13637515-13638325 REVERSEweakly similar to ( 142) H2A3_ORYSA Probable histone H2A.3 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|core histone H2A/H2B/H3/H4, putative, expressed",2.4794953,{"$nulls":8},34.2,"transport.sugars","Os04g0453300","Transcript","moderately similar to ( 454) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 418) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",3.7789395]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os01g0502700","Transcript","weakly similar to ( 143) AT5G02560 | Symbols: HTA12 | HTA12; DNA binding | chr5:575437-576456 FORWARDweakly similar to ( 147) H2A4_ORYSA Probable histone H2A.4 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",1.9363683,{"$nulls":8},34.2,"transport.sugars","Os03g0218400","Transcript","highly similar to ( 757) AT5G26340 | Symbols: MSS1, STP13 | MSS1; carbohydrate transmembrane transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose symporter/ sugar:hydrogen symporter | chr5:9243851-9246994 REVERSEhighly similar to ( 515) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.771308]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0162200","Transcript","weakly similar to ( 182) AT3G54560 | Symbols: HTA11 | HTA11; DNA binding | chr3:20196532-20197466 FORWARDweakly similar to ( 189) H2AV1_ORYSA Probable histone H2A variant 1 - Oryza sativa (Rice) H2A H2A HTA1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",4.3823657,{"$nulls":8},34.2,"transport.sugars","Os05g0567800","Transcript","highly similar to ( 614) AT1G75220 | Symbols: | integral membrane protein, putative | chr1:28229412-28232606 REVERSEweakly similar to ( 145) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",1.4334122]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os08g0490900","Transcript","weakly similar to ( 155) AT5G22880 | Symbols: H2B, HTB2 | HTB2; DNA binding | chr5:7652130-7652567 REVERSEweakly similar to ( 157) H2B1_WHEAT Histone H2B.1 - Triticum aestivum (Wheat) H2B protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.2702293,{"$nulls":8},34.2,"transport.sugars","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0279200","Transcript","weakly similar to ( 143) AT5G02560 | Symbols: HTA12 | HTA12; DNA binding | chr5:575437-576456 FORWARDweakly similar to ( 147) H2A4_ORYSA Probable histone H2A.4 - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.407467,{"$nulls":8},34.2,"transport.sugars","Os02g0574100","Transcript","moderately similar to ( 403) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 382) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-3.042162]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os12g0530000","Transcript","weakly similar to ( 149) AT1G54690 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding | chr1:20414607-20415206 REVERSEweakly similar to ( 166) H2AXB_ORYSA Probable histone H2AXb - Oryza sativa (Rice) H2A H2A HTA1 Histone protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",0.9678197,{"$nulls":8},34.2,"transport.sugars","Os04g0511400","Transcript","highly similar to ( 696) AT1G30220 | Symbols: ATINT2, INT2 | INT2 (INOSITOL TRANSPORTER 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | chr1:10632957-10635439 REVERSEweakly similar to ( 157) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE PRK03893 protein|transporter family protein, putative, expressed",2.9151828]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os09g0433600","Transcript","weakly similar to ( 135) AT5G59970 | Symbols: | histone H4 | chr5:24146352-24146663 REVERSEweakly similar to ( 135) H4_PEA Histone H4 - Pisum sativum (Garden pea) H4 H4 HHT1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",1.1256065,{"$nulls":8},"34.2.1","transport.sugars.sucrose","Os03g0170900","Transcript","moderately similar to ( 491) AT2G02860 | Symbols: SUT2, ATSUC3, SUC3, ATSUT2 | SUT2 (SUCROSE TRANSPORTER 2); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | chr2:828546-832296 REVERSEmoderately similar to ( 308) SUT2_ORYSA Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) protein|sucrose transporter, putativ, expressed",0.96311694]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os04g0583600","Transcript","weakly similar to ( 135) AT5G59970 | Symbols: | histone H4 | chr5:24146352-24146663 REVERSEweakly similar to ( 135) H4_PEA Histone H4 - Pisum sativum (Garden pea) H4 H4 HHT1 protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed",2.759118,{"$nulls":8},34.3,"transport.amino acids","Os02g0802500","Transcript","nearly identical (1208) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDnearly identical (1237) AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",-1.7631084]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os03g0852300","Transcript","very weakly similar to (82.0) AT1G07980 | Symbols: NF-YC10 | NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | chr1:2473523-2474910 REVERSE protein|histone-like transcription factor and archaeal histone, putative, expressed",-1.1165094,{"$nulls":8},34.3,"transport.amino acids","Os01g0337500","Transcript","highly similar to ( 941) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDhighly similar to ( 943) AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",-1.0808805]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os04g0253000","Transcript","protein|histone H1, putative, expressed",1.304377,{"$nulls":8},34.3,"transport.amino acids","Os03g0654400","Transcript","highly similar to ( 732) AT1G58030 | Symbols: CAT2 | CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid transmembrane transporter | chr1:21464185-21468141 REVERSE PotE AA_permease AnsP LysP PRK11357 PRK10836 PRK11387 PRK10238 PRK10580 PRK10249 protein|amino acid permease, putative, expressed",2.8374507]
[null,"28.1.3","DNA.synthesis/chromatin structure.histone","Os06g0160100","Transcript","weakly similar to ( 189) AT4G40030 | Symbols: | histone H3.2 | chr4:18555840-18556417 REVERSEweakly similar to ( 180) H32_WHEAT Histone H3.2 - Triticum aestivum (Wheat) H3 Histone HHT1 protein|histone H3, putative, expressed",2.2025268,{"$nulls":8},34.3,"transport.amino acids","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767]
[null,28.2,"DNA.repair","Os01g0578000","Transcript","moderately similar to ( 325) AT2G45280 | Symbols: ATRAD51C, RAD51C | ATRAD51C; ATP binding / damaged DNA binding / protein binding / recombinase/ single-stranded DNA binding | chr2:18670103-18672041 FORWARDvery weakly similar to (82.4) DMC1_SOYBN Meiotic recombination protein DMC1 homolog - Glycine max (Soybean) Rad51_DMC1_radA recA_like radA Rad51 RecA radB protein|DNA repair protein Rad51, putative, expressed",1.4502782,{"$nulls":8},34.3,"transport.amino acids","Os01g0621200","Transcript","highly similar to ( 560) AT5G41800 | Symbols: | amino acid transporter family protein | chr5:16733842-16735888 FORWARD Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",3.1615722]
[null,28.2,"DNA.repair","Os06g0661800","Transcript","highly similar to ( 697) AT5G24850 | Symbols: CRY3 | CRY3 (cryptochrome 3); DNA binding / DNA photolyase/ FMN binding | chr5:8535399-8538016 REVERSEnearly identical (1083) CRYD_ORYSA Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) PhrB FAD_binding_7 PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",1.7923781,{"$nulls":8},34.3,"transport.amino acids","Os12g0194900","Transcript","moderately similar to ( 318) AT5G49630 | Symbols: AAP6 | AAP6 (AMINO ACID PERMEASE 6); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | chr5:20142681-20146441 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",-2.0046668]
[null,28.2,"DNA.repair","Os01g0757800","Transcript","highly similar to ( 618) AT5G44740 | Symbols: POLH | POLH (Y-FAMILT DNA POLYMERASE H); DNA-directed DNA polymerase | chr5:18047903-18051779 REVERSE Pol_eta IMS Pol_IV_kappa DinP PRK02406 Pol_iota Pol_Y Pol_zeta PRK03348 PRK01810 PRK03858 PRK01216 PRK02794 PRK03352 PRK03103 protein|DNA-directed polymerase, putative, expressed",1.2776455,{"$nulls":8},34.3,"transport.amino acids","Os04g0460300","Transcript","moderately similar to ( 353) AT3G28960 | Symbols: | amino acid transporter family protein | chr3:10984245-10985767 REVERSE Aa_trans SdaC protein|transmembrane amino acid transporter protein, putative, expressed",2.7348843]
[null,28.2,"DNA.repair","Os06g0151800","Transcript","highly similar to ( 569) AT5G50340 | Symbols: | ATP binding / damaged DNA binding / nucleoside-triphosphatase/ nucleotide binding | chr5:20491635-20495830 REVERSEPRK11823 Sms Sms protein|OsLonP2 - Putative Lon protease homologue, expressed",-1.3040417,{"$nulls":8},34.3,"transport.amino acids","Os03g0641200","Transcript","highly similar to ( 536) AT4G21120 | Symbols: AAT1, CAT1 | AAT1 (AMINO ACID TRANSPORTER 1); L-glutamate transmembrane transporter/ L-lysine transmembrane transporter/ arginine transmembrane transporter/ cationic amino acid transmembrane transporter | chr4:11270318-11273775 FORWARD PotE protein|amino acid permease family protein, putative, expressed",1.3785769]
[null,28.2,"DNA.repair","Os05g0498300","Transcript","moderately similar to ( 412) AT3G20475 | Symbols: ATMSH5, MSH5 | MSH5 (MUTS-HOMOLOGUE 5); ATP binding / damaged DNA binding / mismatched DNA binding | chr3:7143546-7150811 FORWARD ABC_MSH5_euk PRK05399 ABC_MutS1 MutS MutS_V MUTSac ABC_MutS_homologs ABC_MSH2_euk ABC_MSH3_euk protein|mutS domain V family protein, expressed",2.3783703,{"$nulls":8},34.3,"transport.amino acids","Os01g0878700","Transcript","moderately similar to ( 466) AT1G44100 | Symbols: AAP5 | AAP5; amino acid transmembrane transporter/ basic amino acid transmembrane transporter | chr1:16764651-16767223 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",2.1816192]
[null,28.2,"DNA.repair","Os01g0858000","Transcript","moderately similar to ( 338) AT1G19485 | Symbols: | AT hook motif-containing protein | chr1:6747167-6751443 FORWARD protein|AT hook motif family protein, expressed",-1.3340768,{"$nulls":8},34.3,"transport.amino acids","Os02g0184200","Transcript","nearly identical (1168) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDnearly identical (1169) AVP_PHAAU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",1.7219385]
[null,28.2,"DNA.repair","Os04g0501200","Transcript","moderately similar to ( 308) AT5G57970 | Symbols: | methyladenine glycosylase family protein | chr5:23467316-23468910 FORWARDAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",1.3783137,{"$nulls":8},34.3,"transport.amino acids","Os05g0447200","Transcript","highly similar to ( 711) AT2G38120 | Symbols: AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter | chr2:15973493-15976792 FORWARDhighly similar to ( 865) LAX2_ORYSA Auxin transporter-like protein 2 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",1.2837814]
[null,28.2,"DNA.repair","Os09g0407200","Transcript","moderately similar to ( 339) AT5G38470 | Symbols: | DNA repair protein RAD23, putative | chr5:15404720-15407251 FORWARDhighly similar to ( 535) RAD23_ORYSA Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) RAD23_N protein|RAD23 DNA repair protein, putative, expressed",-1.1518512,{"$nulls":8},34.3,"transport.amino acids","Os12g0195100","Transcript","highly similar to ( 539) AT1G77380 | Symbols: AAP3, ATAAP3 | AAP3; amino acid transmembrane transporter | chr1:29075201-29077252 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",1.0777216]
[null,28.2,"DNA.repair","Os06g0237900","Transcript","moderately similar to ( 264) AT3G47830 | Symbols: | HhH-GPD base excision DNA repair protein-related | chr3:17647069-17648346 FORWARDNth ENDO3c ENDO3c HhH-GPD protein|hhH-GPD superfamily base excision DNA repair protein, putative, expressed",1.76937,{"$nulls":8},34.4,"transport.nitrate","Os01g0547600","Transcript","moderately similar to ( 271) AT1G12940 | Symbols: ATNRT2.5 | ATNRT2.5 (nitrate transporter2.5); nitrate transmembrane transporter | chr1:4416405-4418337 FORWARDNarK protein|transporter, major facilitator family, putative, expressed",-1.1524473]
[null,28.2,"DNA.repair","Os06g0354700","Transcript","highly similar to ( 535) AT5G13800 | Symbols: | hydrolase, alpha/beta fold family protein | chr5:4452063-4454141 REVERSE MhpC protein|hydrolase, alpha/beta fold family domain containing protein, expressed",-1.1361288,{"$nulls":8},34.5,"transport.ammonium","Os04g0509600","Transcript","highly similar to ( 635) AT4G13510 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | AMT1;1 (AMMONIUM TRANSPORTER 1;1); ammonium transmembrane transporter | chr4:7858220-7859725 FORWARD Ammonium_transp AmtB PRK10666 protein|ammonium transporter protein, putative, expressed",-1.0550585]
[null,28.2,"DNA.repair","Os06g0649800","Transcript","moderately similar to ( 334) AT5G57970 | Symbols: | methyladenine glycosylase family protein | chr5:23467316-23468910 FORWARDAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",2.2182589,{"$nulls":8},34.6,"transport.sulphate","Os04g0652400","Transcript","highly similar to ( 849) AT1G23090 | Symbols: AST91, SULTR3;3 | AST91 (SULFATE TRANSPORTER 91); sulfate transmembrane transporter | chr1:8185238-8188954 REVERSEmoderately similar to ( 341) NO70_SOYBN Early nodulin 70 - Glycine max (Soybean) Sulfate_transp SUL1 PRK11660 STAS protein|sulfate transporter, putative, expressed",-1.3742207]
[null,28.2,"DNA.repair","Os01g0799500","Transcript","moderately similar to ( 298) AT5G44680 | Symbols: | methyladenine glycosylase family protein | chr5:18024461-18025893 REVERSEAdenine_glyco Tag PRK10353 protein|methyladenine glycosylase, putative, expressed",3.920471,{"$nulls":8},34.7,"transport.phosphate","Os01g0852200","Transcript","moderately similar to ( 459) AT3G46980 | Symbols: PHT4;3 | transporter-related | chr3:17307294-17309899 REVERSE protein|transporter, major facilitator family, putative, expressed",1.6583257]
[null,28.2,"DNA.repair","Os09g0104200","Transcript","very weakly similar to (88.6) AT1G07745 | Symbols: ATRAD51D, RAD51D, SSN1 | RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D); ATP binding / DNA binding / DNA-dependent ATPase | chr1:2400797-2402492 REVERSERad51_DMC1_radA recA_like protein|DNA repair protein RAD51 homolog 4, putative, expressed",1.1544582,{"$nulls":8},34.7,"transport.phosphate","Os02g0593500","Transcript","moderately similar to ( 301) AT3G26570 | Symbols: PHT2;1, ORF02 | PHT2;1 (PHOSPHATE TRANSPORTER 2;1); low affinity phosphate transmembrane transporter | chr3:9756416-9758413 FORWARD PHO4 PitA protein|inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed",3.7982666]
[null,28.99,"DNA.unspecified","Os04g0129200","Transcript","moderately similar to ( 216) AT4G13870 | Symbols: WRNEXO | WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE); 3'-5' exonuclease/ nucleic acid binding / protein binding | chr4:8023563-8025542 REVERSE 35EXOc 35EXOc 3_5_exonuc protein|3-5 exonuclease domain-containing protein, putative, expressed",2.6357753,{"$nulls":8},34.8,"transport.metabolite transporters at the envelope membrane","Os01g0239200","Transcript","moderately similar to ( 481) AT5G46110 | Symbols: APE2, TPT | APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2); antiporter/ triose-phosphate transmembrane transporter | chr5:18697606-18700223 FORWARDmoderately similar to ( 491) TPT_MAIZE Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Zea mays (Maize) TPT protein|DUF250 domain containing protein, putative, expressed",4.076439]
[null,28.99,"DNA.unspecified","Os12g0175700","Transcript","highly similar to ( 813) AT1G10950 | Symbols: | endomembrane protein 70, putative | chr1:3659322-3663622 FORWARD EMP70 protein|transmembrane 9 superfamily member, putative, expressed",-1.3407683,{"$nulls":8},34.8,"transport.metabolite transporters at the envelope membrane","Os05g0241200","Transcript","moderately similar to ( 498) AT5G46110 | Symbols: APE2, TPT | APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2); antiporter/ triose-phosphate transmembrane transporter | chr5:18697606-18700223 FORWARDmoderately similar to ( 496) TPT_SPIOL Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) TPT protein|phosphate/phosphate translocator, putative, expressed",3.0902479]
[null,28.99,"DNA.unspecified","Os01g0110800","Transcript","moderately similar to ( 278) AT1G68780 | Symbols: | leucine-rich repeat family protein | chr1:25831881-25833335 REVERSE protein|TOO MANY MOUTHS precursor, putative, expressed",3.7869542,{"$nulls":8},34.8,"transport.metabolite transporters at the envelope membrane","Os04g0602400","Transcript","moderately similar to ( 357) AT5G17520 | Symbols: RCP1, MEX1 | RCP1 (ROOT CAP 1); maltose transmembrane transporter | chr5:5772796-5775231 REVERSEhighly similar to ( 583) MEX1_ORYSA Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) protein|maltose excess protein 1-like, chloroplast precursor, putative, expressed",1.453833]
[null,28.99,"DNA.unspecified","Os09g0130800","Transcript","nearly identical (1156) AT5G35970 | Symbols: | DNA-binding protein, putative | chr5:14119060-14123078 REVERSE COG1112 protein|DNA-binding protein, putative, expressed",1.3053354,{"$nulls":8},34.8,"transport.metabolite transporters at the envelope membrane","Os05g0494500","Transcript","moderately similar to ( 443) AT5G11230 | Symbols: | organic anion transmembrane transporter | chr5:3580562-3581617 FORWARD TPT protein|domain of unknown function, DUF250 domain containing protein, expressed",-0.96053505]
[null,28.99,"DNA.unspecified","Os01g0193900","Transcript","moderately similar to ( 219) AT3G05380 | Symbols: ALY2, ATALY2 | DNA binding / nucleic acid binding / transcription factor | chr3:1540961-1546139 FORWARD DIRP protein|DIRP family protein, putative, expressed",-1.6069416,{"$nulls":8},34.8,"transport.metabolite transporters at the envelope membrane","Os01g0172100","Transcript","moderately similar to ( 326) AT5G33320 | Symbols: CUE1, PPT, ARAPPT | CUE1 (CAB UNDEREXPRESSED 1); antiporter/ triose-phosphate transmembrane transporter | chr5:12588950-12591408 FORWARDweakly similar to ( 173) TPT_PEA Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) TPT protein|phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed",-1.2750273]
[null,28.99,"DNA.unspecified","Os02g0552000","Transcript","highly similar to ( 834) AT1G10950 | Symbols: | endomembrane protein 70, putative | chr1:3659322-3663622 FORWARD EMP70 protein|transmembrane 9 superfamily member, putative, expressed",-1.1779848,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os09g0444700","Transcript","moderately similar to ( 241) AT1G72820 | Symbols: | mitochondrial substrate carrier family protein | chr1:27403457-27404506 FORWARD protein|mitochondrial carrier protein, putative, expressed",-1.3908076]
[null,28.99,"DNA.unspecified","Os11g0181100","Transcript","highly similar to ( 840) AT1G10950 | Symbols: | endomembrane protein 70, putative | chr1:3659322-3663622 FORWARD EMP70 protein|transmembrane 9 superfamily member, putative, expressed",-1.354334,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os08g0481800","Transcript","highly similar to ( 698) AT5G64290 | Symbols: DCT, DIT2.1 | DIT2.1 (DICARBOXYLATE TRANSPORT 2.1); oxoglutarate:malate antiporter | chr5:25714495-25716642 REVERSEmoderately similar to ( 407) SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach)Na_sulph_symp CitT ArsB_NhaD_permease protein|citrate transporter, putative, expressed",1.0410608]
[{"$nulls":15},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os09g0454600","Transcript","moderately similar to ( 404) AT3G48850 | Symbols: | mitochondrial phosphate transporter, putative | chr3:18114759-18116420 REVERSE protein|phosphate carrier protein, mitochondrial precursor, putative, expressed",-2.1220448]
[null,"29.3.1","protein.targeting.nucleus","Os01g0101300","Transcript","moderately similar to ( 478) AT4G24880 | Symbols: | unknown protein | chr4:12808593-12811218 FORWARD protein|snurportin-1, putative, expressed",-0.9844785,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0392700","Transcript","moderately similar to ( 358) AT3G05290 | Symbols: PNC1 | PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1); ADP transmembrane transporter/ ATP transmembrane transporter/ binding | chr3:1506129-1507614 REVERSE protein|mitochondrial carrier protein, putative, expressed",-1.0978266]
[null,29.4,"protein.postranslational modification","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os03g0296800","Transcript","moderately similar to ( 227) AT1G07030 | Symbols: | mitochondrial substrate carrier family protein | chr1:2158631-2160524 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.1860336]
[null,"29.1.4","protein.aa activation.leucine-tRNA ligase","Os01g0120300","Transcript","nearly identical (1067) AT4G04350 | Symbols: EMB2369 | EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | chr4:2128129-2133030 FORWARD leuS LeuS ValS LeuRS_core ileS IleS Ile_Leu_Val_MetRS_core tRNA-synt_1 protein|tRNA synthetase class I, putative, expressed",1.3658978,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0361900","Transcript","moderately similar to ( 366) AT4G39460 | Symbols: SAMC1, SAMT1 | SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding | chr4:18356093-18358596 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",1.9424101]
[null,"29.2.3","protein.synthesis.initiation","Os01g0120800","Transcript","highly similar to ( 913) AT4G11420 | Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor | chr4:6947834-6952053 REVERSEnearly identical (1079) IF3A_MAIZE Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) - Zea mays (Maize) protein|transposon protein, putative, unclassified, expressed",-1.1516262,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os03g0267700","Transcript","moderately similar to ( 410) AT3G53940 | Symbols: | mitochondrial substrate carrier family protein | chr3:19971258-19973564 REVERSEweakly similar to ( 140) BT1_MAIZE Protein brittle-1, chloroplast precursor - Zea mays (Maize) Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.0052853]
[null,"29.3.4.4","protein.targeting.secretory pathway.plasma membrane","Os01g0139000","Transcript","weakly similar to ( 184) AT3G18260 | Symbols: | reticulon family protein (RTNLB9) | chr3:6260328-6261504 REVERSE Reticulon protein|reticulon domain containing protein, putative, expressed",3.424846,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0208000","Transcript","moderately similar to ( 474) AT5G19760 | Symbols: | dicarboxylate/tricarboxylate carrier (DTC) | chr5:6679591-6681845 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-0.95735836]
[null,"29.5.4","protein.degradation.aspartate protease","Os01g0140100","Transcript","moderately similar to ( 422) AT1G25510 | Symbols: | aspartyl protease family protein | chr1:8959372-8960823 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.615424,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os10g0573800","Transcript","moderately similar to ( 361) AT5G46800 | Symbols: BOU | BOU (A BOUT DE SOUFFLE); binding / transporter | chr5:18988779-18989810 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.8643912]
[null,"29.2.1.2.2.26","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26","Os01g0140500","Transcript","weakly similar to ( 143) AT5G67510 | Symbols: | 60S ribosomal protein L26 (RPL26B) | chr5:26937970-26938410 REVERSEweakly similar to ( 129) RL26_BRARA 60S ribosomal protein L26 - Brassica rapa (Turnip) rpl24p protein|ribosomal protein L24, putative, expressed",-1.0917116,{"$nulls":8},34.9,"transport.metabolite transporters at the mitochondrial membrane","Os01g0623200","Transcript","highly similar to ( 538) AT4G27970 | Symbols: SLAH2 | SLAH2 (SLAC1 HOMOLOGUE 2); transporter | chr4:13918290-13920122 REVERSEC4dic_mal_tran TehA PRK10764 protein|C4-dicarboxylate transporter/malic acid transport protein, expressed",-1.4254503]
[null,29.4,"protein.postranslational modification","Os01g0150200","Transcript","moderately similar to ( 225) AT5G10480 | Symbols: PAS2, PEP | PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | chr5:3298047-3299980 REVERSE PTPLA protein|expressed protein",-0.98855084,{"$nulls":8},34.1,"transport.nucleotides","Os04g0587300","Transcript","moderately similar to ( 311) AT1G44750 | Symbols: ATPUP11 | ATPUP11; purine transmembrane transporter | chr1:16894257-16895168 FORWARDTPT protein|purine permease, putative, expressed",-2.0073464]
[null,"29.3.3","protein.targeting.chloroplast","Os01g0151200","Transcript","highly similar to ( 519) AT2G28800 | Symbols: ALB3, ABL3 | ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr2:12357133-12359158 REVERSEmoderately similar to ( 498) PPF1_PEA Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) 60KD_IMP PRK01318 YidC PRK00145 PRK01315 PRK02944 PRK01001 PRK01622 PRK03449 PRK02654 protein|inner membrane protein, putative, expressed",1.532559,{"$nulls":8},34.1,"transport.nucleotides","Os01g0680200","Transcript","weakly similar to ( 167) AT1G30840 | Symbols: ATPUP4 | ATPUP4; purine transmembrane transporter | chr1:10974581-10975729 FORWARD protein|purine permease, putative, expressed",2.1909852]
[null,29.4,"protein.postranslational modification","Os01g0191800","Transcript","moderately similar to ( 498) AT4G32830 | Symbols: AtAUR1 | AtAUR1 (ATAURORA1); histone kinase(H3-S10 specific) / kinase/ protein serine/threonine kinase | chr4:15842557-15844354 FORWARDweakly similar to ( 169) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr PTKc TyrKc PTKc_FAK PTK_CCK4 PTKc_Fes_like PTKc_Tec_like PTKc_Trk PTKc_ALK_LTK PTKc_Abl PTKc_Csk_like PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Syk_like PTKc_FGFR PTKc_Ack_like PTKc_Fes PTKc_Tec_Rlk PTKc_Btk_Bmx PTKc_Ror PTKc_Musk PTKc_Src_like PTKc_Itk PTKc_InsR_like PTKc_TrkC PTKc_TrkA PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Syk PTKc_Frk_like PTKc_c-ros PTKc_TrkB PTKc_Lyn protein|CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.9497192,{"$nulls":8},34.1,"transport.nucleotides","Os02g0689200","Transcript","moderately similar to ( 338) AT1G44750 | Symbols: ATPUP11 | ATPUP11; purine transmembrane transporter | chr1:16894257-16895168 FORWARDTPT protein|purine permease, putative, expressed",-1.1932411]
[null,29.4,"protein.postranslational modification","Os01g0206700","Transcript","highly similar to ( 586) AT5G45820 | Symbols: CIPK20, SnRK3.6, PKS18 | CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase/ protein serine/threonine kinase | chr5:18587081-18588400 REVERSEmoderately similar to ( 479) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Srm_Brk PTKc_Fes_like PTKc_Csk_like PTKc_Fes PTKc_Jak_rpt2 PTKc_Fer PTKc_Tec_Rlk PTKc_Tec_like PTKc_FAK PTKc_Src_like PTKc_Abl PTKc_FGFR PTKc_EphR PTKc_InsR_like PTKc_Chk PTKc_EGFR_like PTKc_Btk_Bmx NAF PTKc_Itk PTKc_Frk_like PTKc_EphR_A PTKc_PDGFR PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_EphR_B PTKc_Ror PTKc_Csk protein|CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",1.3550063,{"$nulls":8},34.11,"transport.NDP-sugars at the ER","Os03g0118200","Transcript","highly similar to ( 506) AT4G23010 | Symbols: ATUTR2, UTR2 | UDP-galactose transporter-related | chr4:12060318-12062486 REVERSE UAA protein|transporter family protein, putative, expressed",4.9018173]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os01g0229900","Transcript","weakly similar to ( 124) AT3G15355 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase | chr3:5183858-5186669 FORWARD protein|ubiquitin-conjugating enzyme, putative, expressed",1.1100749,{"$nulls":8},34.11,"transport.NDP-sugars at the ER","Os12g0154600","Transcript","moderately similar to ( 417) AT4G09810 | Symbols: | transporter-related | chr4:6175415-6176892 REVERSE TPT protein|transporter-related, putative, expressed",-1.0611993]
[null,"29.3.1","protein.targeting.nucleus","Os01g0253300","Transcript","highly similar to ( 776) AT3G06720 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter | chr3:2120559-2123555 FORWARDhighly similar to ( 949) IMA1A_ORYSA Importin alpha-1a subunit - Oryza sativa (Rice) SRP1 ARM IBB protein|importin subunit alpha, putative, expressed",-1.0444578,{"$nulls":8},34.12,"transport.metal","Os01g0972200","Transcript","moderately similar to ( 330) AT5G59520 | Symbols: ZIP2 | ZIP2; copper ion transmembrane transporter/ transferase, transferring glycosyl groups / zinc ion transmembrane transporter | chr5:23991447-23992762 REVERSE Zip protein|metal cation transporter, putative, expressed",1.5007988]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os01g0267200","Transcript","highly similar to ( 535) AT5G23540 | Symbols: | 26S proteasome regulatory subunit, putative | chr5:7938109-7939339 FORWARD JAB_MPN Mov34 COG1310 protein|26S proteasome non-ATPase regulatory subunit 14, putative, expressed",-0.9604581,{"$nulls":8},34.12,"transport.metal","Os12g0616500","Transcript","highly similar to ( 833) AT3G17630 | Symbols: ATCHX19, CHX19 | ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | chr3:6029201-6031773 FORWARD KefB Na_H_Exchanger PRK03562 PRK03659 protein|ATCHX, putative, expressed",-1.3152285]
[null,29.5,"protein.degradation","Os01g0295900","Transcript","weakly similar to ( 191) AT2G45270 | Symbols: | glycoprotease M22 family protein | chr2:18666583-18669332 FORWARD PRK09604 QRI7 Peptidase_M22 protein|O-sialoglycoprotein endopeptidase, putative, expressed",2.4729044,{"$nulls":8},34.12,"transport.metal","Os08g0533900","Transcript","weakly similar to ( 129) AT1G55910 | Symbols: ZIP11 | ZIP11 (ZINC TRANSPORTER 11 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter | chr1:20906161-20907225 FORWARD protein|zinc transporter 2 precursor, putative, expressed",1.1322465]
[null,"29.5.9","protein.degradation.AAA type","Os01g0297200","Transcript","moderately similar to ( 367) AT3G28580 | Symbols: | AAA-type ATPase family protein | chr3:10715736-10717238 FORWARD protein|ATPase, putative, expressed",-1.89193,{"$nulls":8},34.12,"transport.metal","Os03g0667500","Transcript","moderately similar to ( 305) AT1G31260 | Symbols: ZIP10 | ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter | chr1:11175559-11177362 REVERSE Zip protein|metal cation transporter, putative, expressed",1.4625627]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0303600","Transcript","weakly similar to ( 124) AT2G01275 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:142610-143809 REVERSE protein|zinc finger, C3HC4 type, putative, expressed",2.591104,{"$nulls":8},34.12,"transport.metal","Os06g0542300","Transcript","protein|heavy metal-associated domain containing protein, expressed",-2.0765414]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0310800","Transcript","moderately similar to ( 262) AT3G62220 | Symbols: | serine/threonine protein kinase, putative | chr3:23029276-23030864 REVERSEweakly similar to ( 135) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr S_TKc S_TKc Pkinase PTKc PTKc_Jak_rpt2 PTKc_Src_like PTKc_Fyn_Yrk PTKc_Src PTKc_Trk PTKc_Yes PTKc_Frk_like PTKc_Csk_like PTKc_Fes_like PTK_CCK4 PTKc_Srm_Brk PTKc_Ack_like PTKc_Lyn PTKc_Ror SPS1 PTKc_InsR_like PTKc_Syk_like PTKc_TrkB PTKc_Hck PTKc_EGFR_like PTKc_Lck_Blk protein|OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed",-1.0326945,{"$nulls":8},34.12,"transport.metal","Os03g0178100","Transcript","highly similar to ( 882) AT5G21930 | Symbols: PAA2, HMA8 | PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr5:7243129-7248721 FORWARD ZntA PRK10671 zntA E1-E2_ATPase MgtA KdpB PRK01122 PRK10517 protein|copper-transporting ATPase PAA1, putative, expressed",1.0289048]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os01g0511300","Transcript","highly similar to ( 542) AT4G19006 | Symbols: | 26S proteasome regulatory subunit, putative (RPN9) | chr4:10409349-10411347 REVERSE protein|proteasome subunit, putative, expressed",-1.0987902,{"$nulls":8},34.12,"transport.metal","Os05g0472400","Transcript","moderately similar to ( 242) AT1G05300 | Symbols: ZIP5 | ZIP5; cation transmembrane transporter/ metal ion transmembrane transporter | chr1:1546161-1547709 REVERSE Zip protein|metal cation transporter, putative, expressed",2.9450293]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os01g0565900","Transcript","protein|protein transport protein Sec61 subunit beta, putative, expressed",-1.1313366,{"$nulls":8},34.12,"transport.metal","Os07g0258400","Transcript","highly similar to ( 523) AT1G80830 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter | chr1:30373066-30375644 REVERSE Nramp PRK00701 MntH protein|metal transporter Nramp6, putative, expressed",-2.169833]
[null,"29.5.7","protein.degradation.metalloprotease","Os01g0574400","Transcript","highly similar to ( 861) AT2G26140 | Symbols: ftsh4 | ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase | chr2:11131939-11135126 REVERSEmoderately similar to ( 346) FTSH_ORYSA Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) HflB hflB Peptidase_M41 RPT1 PRK03992 AAA SpoVK COG1223 protein|OsFtsH4 FtsH protease, homologue of AtFtsH4, expressed",-1.1571645,{"$nulls":8},34.12,"transport.metal","Os03g0156700","Transcript","moderately similar to ( 296) AT4G35080 | Symbols: | high-affinity nickel-transport family protein | chr4:16698384-16700012 FORWARD protein|high-affinity nickel-transport family protein, putative, expressed",-1.1017166]
[null,"29.5.4","protein.degradation.aspartate protease","Os01g0598600","Transcript","moderately similar to ( 384) AT1G01300 | Symbols: | aspartyl protease family protein | chr1:117065-118522 FORWARD Asp protein|aspartic proteinase, putative, expressed",1.9372562,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os06g0705700","Transcript","highly similar to ( 506) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter, putative, expressed",1.3933941]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0631700","Transcript","highly similar to ( 574) AT3G59110 | Symbols: | protein kinase family protein | chr3:21855673-21857847 FORWARDmoderately similar to ( 221) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Itk PTKc_Tec_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_EGFR_like PTKc_Syk_like PTKc_Fes_like PTKc_InsR_like PTKc_Ror PTKc_Trk PTKc_EphR_A2 PTKc_Chk PTKc_Ack_like PTKc_Tec_Rlk PTKc_EphR_B PTKc_ALK_LTK PTKc_c-ros PTKc_EphR_A PTKc_Csk PTK_CCK4 PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Lck_Blk PTKc_Met_Ron PTKc_Syk PTKc_Src PTKc_Zap-70 PTKc_Ror1 PTKc_Btk_Bmx PTKc_Fes PTKc_TrkC PTKc_TrkA PTKc_TrkB PTKc_Fyn_Yrk PTK_HER3 PTKc_FGFR PTKc_DDR PTKc_Lyn PTK_Ryk PTKc_Yes PTKc_RET PTKc_Tie2 PTKc_HER4 PTKc_PDGFR PTKc_FAK protein|serine/threonine-protein kinase, putative, expressed",1.8202939,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os03g0116000","Transcript","moderately similar to ( 243) AT2G46470 | Symbols: OXA1L | OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) | chr2:19072659-19074948 FORWARD YidC PRK02944 60KD_IMP PRK01622 PRK00145 protein|inner membrane protein, putative, expressed",-1.582964]
[null,29.5,"protein.degradation","Os01g0664000","Transcript","highly similar to ( 528) AT5G46390 | Symbols: | peptidase S41 family protein | chr5:18816612-18819148 FORWARDPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP1 - Putative C-terminal processing peptidase homologue, expressed",1.0055195,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os06g0125500","Transcript","nearly identical (1085) AT4G10770 | Symbols: ATOPT7, OPT7 | OPT7 (OLIGOPEPTIDE TRANSPORTER 7); oligopeptide transporter | chr4:6628646-6632517 REVERSE OPT protein|oligopeptide transporter, putative, expressed",-1.4356852]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0664200","Transcript","highly similar to ( 556) AT2G42960 | Symbols: | protein kinase family protein | chr2:17868597-17870630 REVERSEmoderately similar to ( 247) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc S_TKc Pkinase_Tyr Pkinase S_TKc PTKc PTKc_Srm_Brk PTKc_Csk_like PTKc_Jak_rpt2 SPS1 PTKc_Fes_like PTKc_Src_like PTKc_Syk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Trk PTKc_InsR_like PTKc_EphR PTKc_Ror PTKc_Chk PTKc_Itk PTKc_Tec_like PTKc_EphR_A2 PTK_CCK4 PTKc_ALK_LTK PTKc_Jak2_Jak3_rpt2 PTKc_Fes PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Fer PTKc_c-ros PTKc_Lck_Blk PTKc_EphR_A PTKc_DDR PTKc_TrkA PTKc_FGFR PTKc_Src PTKc_TrkC PTKc_Ack_like PTKc_Csk PTKc_Abl PTKc_Zap-70 PTKc_PDGFR PTKc_Syk PTKc_Axl_like PTKc_Tec_Rlk PTKc_RET PTKc_Lyn PTKc_TrkB PTKc_Fyn_Yrk PTKc_FAK PTKc_DDR_like PTKc_Btk_Bmx PTKc_Musk PTKc_Met_Ron PTKc_Jak1_rpt2 PTKc_FGFR2 PTK_Ryk PTK_HER3 PTKc_HER4 PTKc_Ror1 protein|serine/threonine-protein kinase, putative, expressed",3.8064172,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os01g0902700","Transcript","highly similar to ( 542) AT3G54140 | Symbols: ATPTR1, PTR1 | PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter | chr3:20045885-20048154 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.2975117]
[null,"29.2.1.1.1.1.20","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S20","Os01g0678600","Transcript","weakly similar to ( 111) AT3G15190 | Symbols: | chloroplast 30S ribosomal protein S20, putative | chr3:5116216-5117412 FORWARD protein|ribosomal protein rpS20, putative, expressed",2.1842115,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os07g0603800","Transcript","moderately similar to ( 462) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",-1.1091557]
[null,"29.2.1.2.2.537","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A","Os01g0679700","Transcript","weakly similar to ( 114) AT3G10950 | Symbols: | 60S ribosomal protein L37a (RPL37aB) | chr3:3423893-3424566 FORWARDweakly similar to ( 119) RL37A_ORYSA 60S ribosomal protein L37a - Oryza sativa (Rice) Ribosomal_L37ae protein|60S ribosomal protein L37a, putative, expressed",-0.95343685,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os10g0110600","Transcript","moderately similar to ( 493) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",2.1132662]
[null,"29.2.4","protein.synthesis.elongation","Os01g0698900","Transcript","weakly similar to ( 112) AT3G12390 | Symbols: | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | chr3:3942344-3943595 FORWARD protein|NAC domain containing protein, putative, expressed",3.1615646,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os10g0109900","Transcript","highly similar to ( 510) AT1G62200 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:22982147-22984334 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",3.2013302]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0703300","Transcript","moderately similar to ( 312) AT5G55970 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:22668019-22669312 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.9407415,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os10g0110800","Transcript","moderately similar to ( 357) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",3.2314777]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0741200","Transcript","highly similar to ( 635) AT1G51940 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr1:19296092-19298941 REVERSEweakly similar to ( 185) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc Pkinase S_TKc S_TKc PTKc_Csk_like PTKc_InsR_like PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Csk PTKc_Src_like PTKc_Srm_Brk SPS1 PTKc_Jak_rpt2 PTKc_Tec_like PTKc_ALK_LTK PTKc_Fes_like PTKc_c-ros PTKc_Abl PTKc_Frk_like PTKc_Tie2 PTKc_EGFR_like PTKc_Itk PTK_CCK4 PTKc_Tie1 PTKc_EphR PTKc_Ror PTKc_Btk_Bmx PTKc_Tie PTKc_FGFR PTKc_Lck_Blk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Trk PTKc_Fyn_Yrk PTKc_IGF-1R PTKc_Lyn PTKc_Fes PTKc_Met_Ron PTKc_Ack_like PTKc_Src PTKc_InsR PTKc_Yes PTKc_FAK PTKc_FGFR4 PTKc_Musk PTKc_RET PTKc_DDR PTKc_Fer PTKc_FGFR1 PTKc_Ror1 PTKc_Tyk2_rpt2 PTK_Ryk PTKc_EphR_A2 PTKc_PDGFR PTKc_EphR_A PTKc_TrkB PTKc_Hck PTKc_FGFR3 PTKc_FGFR2 PTKc_TrkA PTKc_EphR_B PTKc_TrkC PTKc_DDR_like PTKc_Axl_like PTKc_Tyro3 protein|protein kinase family protein, putative, expressed",2.9853084,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os03g0235700","Transcript","highly similar to ( 736) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.6259762]
[null,29.1,"protein.aa activation","Os01g0743400","Transcript","moderately similar to ( 498) AT2G25840 | Symbols: OVA4 | OVA4 (ovule abortion 4); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tryptophan-tRNA ligase | chr2:11021924-11025158 FORWARD PRK00927 TrpS TrpRS_core Tyr_Trp_RS_core tRNA-synt_1b PRK12283 PRK12284 PRK12556 PRK12282 protein|tRNA synthetase, putative, expressed",2.165901,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os03g0235900","Transcript","weakly similar to ( 192) AT2G02020 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr2:479117-481131 FORWARD PTR2 protein|peptide transporter PTR2, putative, expressed",1.3953772]
[null,29.5,"protein.degradation","Os01g0743600","Transcript","moderately similar to ( 412) AT2G25740 | Symbols: | ATP-dependent protease La (LON) domain-containing protein | chr2:10980175-10983632 FORWARD protein|ATP-dependent protease La, putative, expressed",1.2579664,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os10g0111700","Transcript","highly similar to ( 535) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",5.1882243]
[null,"29.2.1.1.1.2.13","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13","Os01g0749200","Transcript","moderately similar to ( 272) AT1G78630 | Symbols: emb1473 | emb1473 (embryo defective 1473); structural constituent of ribosome | chr1:29575997-29577406 FORWARDmoderately similar to ( 265) RK13_SPIOL 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) rplM Ribosomal_L13 RplM Ribosomal_L13 protein|ribosomal protein L13, putative, expressed",2.2505827,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os10g0554200","Transcript","highly similar to ( 633) AT1G12110 | Symbols: NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | NRT1.1; nitrate transmembrane transporter/ transporter | chr1:4105341-4109290 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.6377968]
[null,"29.2.1.2.2.518","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A","Os01g0752300","Transcript","moderately similar to ( 310) AT1G29970 | Symbols: | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1) | chr1:10499952-10501311 REVERSEmoderately similar to ( 334) RL18A_ORYSA 60S ribosomal protein L18a - Oryza sativa (Rice) Ribosomal_L18ae protein|60S ribosomal protein L18a, putative, expressed",-0.9993324,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os01g0872600","Transcript","moderately similar to ( 468) AT1G22540 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:7964202-7966222 FORWARD PTR2 PTR2 protein|proton-dependent oligopeptide transport, putative, expressed",5.1984105]
[null,"29.2.4","protein.synthesis.elongation","Os01g0752700","Transcript","highly similar to ( 906) AT2G31060 | Symbols: | elongation factor family protein | chr2:13213496-13218544 REVERSEvery weakly similar to (81.6) EF2_BETVU Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) TypA PRK10218 TypA_BipA LepA PRK05433 GTP_EFTU PRK07560 GTP_translation_factor LepA EF2 FusA EF-G Snu114p TetM_like PRK12739 TEF1 PRK00007 PRK12317 BipA_TypA_C PRK12740 TufB PRK00049 PRK12735 PRK12736 BipA_TypA_II tufA EF-G_bact RF3 PrfC EF1_alpha prfC CysN protein|GTP-binding protein typA/bipA, putative, expressed",-0.9452321,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os01g0142800","Transcript","highly similar to ( 787) AT3G54140 | Symbols: ATPTR1, PTR1 | PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter | chr3:20045885-20048154 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",-1.0931097]
[null,"29.5.1","protein.degradation.subtilases","Os01g0769200","Transcript","highly similar to ( 992) AT4G20430 | Symbols: | subtilase family protein | chr4:11017656-11021105 REVERSEPeptidase_S8 protein|OsSub4 - Putative Subtilisin homologue, expressed",1.6759982,{"$nulls":8},34.13,"transport.peptides and oligopeptides","Os03g0103000","Transcript","highly similar to ( 516) AT1G12110 | Symbols: NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | NRT1.1; nitrate transmembrane transporter/ transporter | chr1:4105341-4109290 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",4.486815]
[null,"29.5.7","protein.degradation.metalloprotease","Os01g0778800","Transcript","nearly identical (1154) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr PqqL Peptidase_M16 Peptidase_M16_C protein|insulin-degrading enzyme, putative, expressed",1.1154661,{"$nulls":8},34.14,"transport.unspecified cations","Os10g0580400","Transcript","highly similar to ( 900) AT5G45380 | Symbols: ATDUR3, DUR3 | sodium:solute symporter family protein | chr5:18391337-18395696 FORWARD PutP SSF protein|urea active transporter, putative, expressed",-2.238878]
[null,"29.5.7","protein.degradation.metalloprotease","Os01g0779100","Transcript","highly similar to ( 701) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr protein|insulin-degrading enzyme, putative, expressed",1.1154661,{"$nulls":8},34.14,"transport.unspecified cations","Os02g0465900","Transcript","moderately similar to ( 201) AT4G31290 | Symbols: | ChaC-like family protein | chr4:15186851-15188278 FORWARD ChaC protein|cation transport regulator-like protein 1, putative, expressed",1.8619734]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0802000","Transcript","moderately similar to ( 202) AT2G40830 | Symbols: RHC1A | RHC1A; protein binding / zinc ion binding | chr2:17043642-17044628 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.3565899,{"$nulls":8},34.14,"transport.unspecified cations","Os09g0484900","Transcript","highly similar to ( 661) AT5G47560 | Symbols: ATTDT, ATSDAT, TDT | TDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transmembrane transporter/ sodium:dicarboxylate symporter | chr5:19287895-19290347 REVERSE SLC13_permease CitT Na_sulph_symp ArsB_NhaD_permease protein|citrate transporter, putative, expressed",-1.9309164]
[null,"29.2.1.99.2.34","protein.synthesis.ribosomal protein.unknown.large subunit.L34","Os01g0805000","Transcript","protein|50S ribosomal protein, putative, expressed",2.2659514,{"$nulls":8},34.14,"transport.unspecified cations","Os01g0869200","Transcript","moderately similar to ( 244) AT3G19640 | Symbols: | magnesium transporter CorA-like family protein (MRS2-3) | chr3:6820969-6823104 FORWARD CorA protein|CorA-like magnesium transporter protein, putative, expressed",-1.547753]
[null,29.4,"protein.postranslational modification","Os01g0864700","Transcript","highly similar to ( 637) AT3G44200 | Symbols: ATNEK6, NEK6, IBO1 | NEK6 (\"NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6\"); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:15906788-15911365 FORWARDweakly similar to ( 129) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_FAK PTKc_Ack_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Src_like PTKc_Syk_like PTKc_Lck_Blk PTKc_Src PTKc_Itk PTKc_InsR_like PTKc_Abl PTKc_Csk PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Frk_like PTKc_EphR PTKc_PDGFR PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_TrkB PTKc_Ror PTKc_Lyn protein|protein kinase domain containing protein, expressed",3.0941658,{"$nulls":8},34.14,"transport.unspecified cations","Os08g0130000","Transcript","moderately similar to ( 379) AT2G04305 | Symbols: | magnesium transporter CorA-like protein-related | chr2:1501679-1503448 REVERSECorA protein|expressed protein",1.0199447]
[null,"29.5.11.4.3.2","protein.degradation.ubiquitin.E3.SCF.FBOX","Os01g0881900","Transcript","moderately similar to ( 392) AT1G21410 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD protein|F-box/LRR-repeat protein 2, putative, expressed",2.5102894,{"$nulls":8},34.14,"transport.unspecified cations","Os01g0645200","Transcript","highly similar to ( 539) AT2G26900 | Symbols: | bile acid:sodium symporter family protein | chr2:11475156-11477870 REVERSE COG0385 SBF protein|bile acid sodium symporter family protein, putative, expressed",3.1301339]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613,{"$nulls":8},34.15,"transport.potassium","Os07g0108800","Transcript","moderately similar to ( 286) AT5G55630 | Symbols: KCO1, TPK1 | ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel | chr5:22531718-22532893 FORWARD protein|potassium channel protein, putative, expressed",-1.329872]
[null,29.4,"protein.postranslational modification","Os01g0892800","Transcript","highly similar to ( 604) AT2G31800 | Symbols: | ankyrin protein kinase, putative | chr2:13520605-13523646 REVERSEvery weakly similar to (91.7) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Ack_like PTKc_InsR_like PTKc_Fes_like PTKc_Ror PTKc_Srm_Brk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Frk_like PTKc_Tec_like PTKc_FGFR PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Csk PTKc_Itk PTKc_DDR PTKc_Abl PTKc_FAK PTKc_Fer PTKc_ALK_LTK SPS1 PTKc_EphR_B PTKc_Jak1_rpt2 PTKc_Lck_Blk PTKc_Btk_Bmx PTKc_RET PTKc_EphR_A2 PTKc_Lyn PTKc_Tyk2_rpt2 PTKc_EphR_A PTKc_Ror1 ANK PTKc_EGFR_like PTKc_PDGFR PTKc_Trk PTKc_Musk PTKc_FGFR1 PTK_CCK4 PTKc_Fyn_Yrk PTKc_EphR_A10 PTKc_Fes protein|serine/threonine protein kinase, putative, expressed",-1.0663403,{"$nulls":8},34.15,"transport.potassium","Os09g0376900","Transcript","nearly identical (1108) AT1G60160 | Symbols: | potassium transporter family protein | chr1:22188330-22191395 REVERSEhighly similar to ( 798) HAK14_ORYSA Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-1.3946184]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0894600","Transcript","weakly similar to ( 118) AT2G02960 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:862346-863980 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",2.6284146,{"$nulls":8},34.15,"transport.potassium","Os01g0930400","Transcript","highly similar to ( 787) AT4G13420 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+ TRANSPORTER 5); potassium ion transmembrane transporter/ potassium:sodium symporter | chr4:7797038-7802174 REVERSEhighly similar to ( 803) HAK1_ORYSA Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-2.081079]
[null,29.6,"protein.folding","Os01g0894700","Transcript","very weakly similar to (87.0) AT2G30695 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 207 Blast hits to 207 proteins in 55 species: Archae - 0; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr2:13079269-13081095 REVERSE protein|expressed protein",1.815704,{"$nulls":8},34.15,"transport.potassium","Os07g0509200","Transcript","nearly identical (1002) AT5G09400 | Symbols: KUP7 | KUP7; potassium ion transmembrane transporter | chr5:2916377-2920604 FORWARDnearly identical (1461) HAK14_ORYSA Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-1.1306559]
[null,"29.5.3","protein.degradation.cysteine protease","Os01g0900900","Transcript","moderately similar to ( 204) AT3G57810 | Symbols: | OTU-like cysteine protease family protein | chr3:21416336-21417809 FORWARD OTU protein|OTU-like cysteine protease family protein, putative, expressed",-1.0183516,{"$nulls":8},34.15,"transport.potassium","Os06g0671000","Transcript","highly similar to ( 748) AT2G30070 | Symbols: ATKT1, ATKT1P, ATKUP1, KUP1 | ATKT1 (POTASSIUM TRANSPORTER 1); potassium ion transmembrane transporter | chr2:12835097-12838466 FORWARDnearly identical (1386) HAK13_ORYSA Probable potassium transporter 13 (OsHAK13) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",3.334135]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0901000","Transcript","highly similar to ( 764) AT1G27910 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45); ubiquitin-protein ligase | chr1:9720962-9723975 REVERSEweakly similar to ( 113) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox U-box protein|armadillo/beta-catenin repeat family protein, putative, expressed",1.5737334,{"$nulls":8},34.15,"transport.potassium","Os03g0574900","Transcript","highly similar to ( 689) AT4G13420 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+ TRANSPORTER 5); potassium ion transmembrane transporter/ potassium:sodium symporter | chr4:7797038-7802174 REVERSEnearly identical (1016) HAK16_ORYSA Probable potassium transporter 16 (OsHAK16) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-2.2830698]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os01g0908700","Transcript","highly similar to ( 534) AT5G14420 | Symbols: RGLG2 | RGLG2 (RING domain Ligase2); ubiquitin-protein ligase | chr5:4648355-4650563 REVERSE vWA_copine_like Copine protein|copine, putative, expressed",-0.9942935,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0190300","Transcript","nearly identical (1597) AT3G28345 | Symbols: | ABC transporter family protein | chr3:10593921-10598775 REVERSEnearly identical (2187) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB SunT ABCC_MsbA PRK11176 ABCC_ATM1_transporter ABCC_Glucan_exporter_like ATM1 ABCC_TAP ABCC_Hemolysin CydD PRK10789 ABCC_MRP_Like ABCC_bacteriocin_exporters PRK11160 CydC PRK11174 ABCC_MRP_domain2 ArpD PRK10790 AbcC ABCC_NFT1 ABCC_Protease_Secretion ABC_PstB_phosphate_transporter ABC_MetN_methionine_transporter ABC_cobalt_CbiO_domain1 ABC_tran ABCC_MRP_domain1 ABCC_SUR2 ABCC_cytochrome_bd ABC_Carb_Solutes_like CcmA ABC_Org_Solvent_Resistant FepC GlnQ PstB SalX ABC_MJ0796_Lo1CDE_FtsE PotA COG1123 CbiO ABC_Pro_Gly_Bertaine OpuBA ABC_membrane TauB ABC_Class3 ABC_OpuCA_Osmoprotection ABC_NrtD_SsuB_transporters Ttg2A ABC_NikE_OppD_transporters MalK DppF COG3638 ABC_HisP_GlnQ_permeases ABC_PotA_N ProV ABC_ModC_molybdenum_transporter ABC_PhnC_transporter ABC_DR_subfamily_A ABC_Iron-Siderophores_B12_Hemin ABC_subfamily_A CysA potA AppF ABC_Mj1267_LivG_branched glnQ MglA metN NatA ABC_FtsE_transporter DppD ABC_CysA_sulfate_importer FtsE ABC_TM1139_LivF_branched ABC_ModC_like ZnuC ThiQ LivG ABC_ATPase dppF ABC_drug_resistance_like ABC_cobalt_CbiO_domain2 PRK10070 COG4619 COG3845 fecE COG4172 ABC_MalK_N TauB ABC_Metallic_Cations ABCG_EPDR HisP PRK11264 LivF ABCC_CFTR2 potG artP ABCC_SUR1_N PRK10744 CeuD ABC_NatA_sodium_exporter PRK10619 ModC fbpC ABCC_CFTR1 COG4181 COG4178 PRK10851 ArtP PhnK PvdE PRK10247 PRK10535 modC ABC_putative_ATPase PRK10522 ABC_YhbG TagH YhbG ABC_BcrA_bacitracin_resist thiQ Uup ABC_ThiQ_thiamine_transporter ABC_DrrA ModF sufC ABC_Carb_Monos_I ABCG_White ABC_KpsT_Wzt PRK10419 COG4559 araG btuD COG4136 PRK10762 PRK11831 PRK11000 PRK10575 ABC_FeS_Assembly tauB PRK10261 ssuB PRK10253 PRK10908 protein|multidrug resistance protein, putative, expressed",-2.1796088]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os01g0918200","Transcript","weakly similar to ( 144) AT5G55160 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | chr5:22383747-22384772 REVERSEweakly similar to ( 148) SMT3_ORYSA Ubiquitin-like protein SMT3 - Oryza sativa (Rice) Sumo SMT3 protein|ubiquitin family domain containing protein, expressed",1.0638914,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0826500","Transcript","nearly identical (1089) AT1G64550 | Symbols: ATGCN3 | ATGCN3; transporter | chr1:23968850-23973369 FORWARD Uup PRK10636 PRK11147 PRK11819 ABCF_EF-3 ABC_tran COG1123 FepC ZnuC CbiO ABCC_MRP_Like ABC_cobalt_CbiO_domain1 ABC_Iron-Siderophores_B12_Hemin ABC_Metallic_Cations ABC_ATPase CydD ABCC_Protease_Secretion ABC_Org_Solvent_Resistant znuC SalX SunT CcmA ABC_DR_subfamily_A Ttg2A ABC_MJ0796_Lo1CDE_FtsE COG3638 ModF ABCC_cytochrome_bd MdlB TauB CcmA ABC_cobalt_CbiO_domain2 ABC_KpsT_Wzt COG1245 DppF ArpD TagH ABCC_bacteriocin_exporters FtsE ABC_Class3 ABC_Carb_Solutes_like ABC_NrtD_SsuB_transporters ABC_PhnC_transporter ABCC_ATM1_transporter COG4586 ABC_Mj1267_LivG_branched ABC_ModC_molybdenum_transporter ABC_subfamily_A ABC_NatA_like ABC_BcrA_bacitracin_resist CysA CydC LivG PRK11160 protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0999418]
[null,"29.2.1.2.2.57","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A","Os01g0924800","Transcript","moderately similar to ( 306) AT2G47610 | Symbols: | 60S ribosomal protein L7A (RPL7aA) | chr2:19529854-19531401 FORWARDmoderately similar to ( 329) RL7A_ORYSA 60S ribosomal protein L7a - Oryza sativa (Rice) Ribosomal_L7Ae protein|ribosomal protein L7Ae, putative, expressed",-1.0217015,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0904200","Transcript","moderately similar to ( 368) AT4G24810 | Symbols: | ABC1 family protein | chr4:12786791-12789598 REVERSE AarF ABC1 ubiB protein|ABC1 family domain containing protein, putative, expressed",1.3979836]
[null,29.4,"protein.postranslational modification","Os01g0925700","Transcript","moderately similar to ( 425) AT5G50860 | Symbols: | protein kinase family protein | chr5:20693778-20696983 REVERSEmoderately similar to ( 211) CDC22_MEDSA Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr PTKc TyrKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Src_like PTKc_Fes_like PTKc_Abl PTKc_Jak1_rpt2 protein|protein kinase domain containing protein, expressed",-1.0012909,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0356400","Transcript","nearly identical (1574) AT2G47800 | Symbols: ATMRP4, EST3 | ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4); ATPase, coupled to transmembrane movement of substances / folic acid transporter | chr2:19574944-19580383 FORWARDweakly similar to ( 142) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABCC_MRP_domain2 ABCC_MRP_domain1 MdlB ABCC_NFT1 SunT ABCC_SUR2 ABCC_Glucan_exporter_like ABCC_CFTR2 ABC_MTABC3_MDL1_MDL2 ABCC_SUR1_N ABCC_MRP_Like ABCC_MsbA ABCC_ATM1_transporter CydD PRK10790 ABCC_CFTR1 ABCC_bacteriocin_exporters CydC ABCC_Hemolysin ATM1 PRK11176 PRK11174 PRK11160 CcmA ABCC_TAP ABC_tran ABC_cobalt_CbiO_domain1 ABCC_Protease_Secretion AbcC ABCC_cytochrome_bd ABC_PstB_phosphate_transporter PRK10789 ABC_Metallic_Cations CbiO ZnuC ArpD ABC_Org_Solvent_Resistant FepC ABC_MetN_methionine_transporter ABC_NikE_OppD_transporters ABC_Carb_Solutes_like ABC_DR_subfamily_A ABC_membrane PotA ABC_MJ0796_Lo1CDE_FtsE ABC_NrtD_SsuB_transporters ABC_ATPase COG1123 ABC_Pro_Gly_Bertaine SalX TauB ABC_PhnC_transporter PstB MalK ABC_subfamily_A COG3638 OpuBA Ttg2A DppF ABC_Class3 MglA ABC_Iron-Siderophores_B12_Hemin ABC_cobalt_CbiO_domain2 GlnQ CysA ABC_TM1139_LivF_branched DppD ABC_OpuCA_Osmoprotection ProV ABC_Mj1267_LivG_branched LivF ABC_HisP_GlnQ_permeases COG4178 Uup ABC_ModC_like YhbG PRK10522 COG3845 metN COG4619 ABC_YhbG FtsE ABC_PotA_N ABC_drug_resistance_like ABC_MalK_N ABC_KpsT_Wzt ABC_CysA_sulfate_importer ABC_putative_ATPase PhnK ABC_BcrA_bacitracin_resist LivG NatA ABCG_White ABC_Carb_Monos_I AppF potA TagH btuD PvdE PRK10851 ABC_NatA_sodium_exporter ABC_Carb_Monos_II protein|multidrug resistance-associated protein, putative, expressed",-1.2572275]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os01g0960400","Transcript","highly similar to ( 944) AT1G06840 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:2097854-2103479 REVERSEmoderately similar to ( 243) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Src_like PTKc_Frk_like PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Srm_Brk PTKc_Tec_like PTKc_Abl PTKc_Fes_like PTKc_Src PTKc_Musk PTKc_EphR PTKc_c-ros PTKc_Ror PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_TrkB PTKc_EphR_A2 PTKc_Itk PTKc_Syk_like PTKc_Fer PTKc_Fyn_Yrk PTKc_RET PTKc_Ack_like SPS1 PTKc_Yes PTKc_Chk PTKc_InsR_like PTKc_Btk_Bmx PTKc_EGFR_like PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_TrkC PTKc_TrkA PTKc_Csk PTKc_Tec_Rlk PTKc_Jak1_rpt2 PTKc_FAK PTKc_Lyn PTKc_FGFR PTKc_EphR_A PTKc_ALK_LTK PTKc_DDR PTKc_Tie2 PTKc_Axl_like PTK_CCK4 PTKc_Hck PTKc_Ror1 PTKc_HER2 PTKc_Fes PTKc_Tie1 PTKc_Zap-70 PTKc_FGFR4 PTKc_Tie PTKc_DDR2 PTKc_HER4 PTK_HER3 PTKc_DDR1 PTKc_InsR PTKc_IGF-1R PTKc_FGFR3 PTKc_Tyro3 protein|expressed protein",-1.4444429,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os04g0459000","Transcript","nearly identical (1540) AT3G28860 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ABCB19; ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter | chr3:10870287-10877286 REVERSEhighly similar to ( 837) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB SunT ABCC_MsbA ABCC_ATM1_transporter ABCC_Glucan_exporter_like PRK11176 ATM1 ABCC_Hemolysin ABCC_TAP CydD ABCC_bacteriocin_exporters ABCC_MRP_Like CydC PRK10790 PRK11160 PRK10789 ArpD PRK11174 ABCC_MRP_domain2 AbcC ABC_PstB_phosphate_transporter PstB ABC_MetN_methionine_transporter PotA ABCC_Protease_Secretion ABC_cobalt_CbiO_domain1 ABC_Carb_Solutes_like ABC_OpuCA_Osmoprotection ABC_tran ABCC_cytochrome_bd OpuBA ABCC_NFT1 ABCC_MRP_domain1 ABC_Org_Solvent_Resistant CbiO ABC_Pro_Gly_Bertaine FepC ABC_NrtD_SsuB_transporters MalK COG1123 ABC_membrane DppF GlnQ TauB ABCC_SUR2 ABC_PotA_N ProV SalX ABC_NikE_OppD_transporters ABC_Class3 metN CcmA Ttg2A ABC_ModC_like FtsE ABC_MJ0796_Lo1CDE_FtsE CysA potA ABC_HisP_GlnQ_permeases COG3638 MglA ABC_PhnC_transporter AppF ThiQ DppD ABC_Iron-Siderophores_B12_Hemin COG4172 ABC_DR_subfamily_A ABC_ATPase ABC_CysA_sulfate_importer ABC_ModC_molybdenum_transporter ABC_MalK_N PRK10070 ABC_TM1139_LivF_branched ABC_FtsE_transporter PRK10744 ABC_Mj1267_LivG_branched glnQ ABC_subfamily_A ABC_drug_resistance_like ZnuC NatA fbpC HisP ABC_Metallic_Cations dppF potG fecE ABC_cobalt_CbiO_domain2 COG3845 LivF LivG TauB ABCC_CFTR1 ABCC_SUR1_N ModF PRK11264 ABC_ThiQ_thiamine_transporter PRK10851 ABCG_EPDR PhnK PRK10619 artP YhbG ModC Uup PRK10908 ArtP ABC_NatA_sodium_exporter COG4619 ssuB PRK11000 ABC_YhbG thiQ COG4181 ABC_Carb_Monos_I PRK10247 CeuD araG ABCC_CFTR2 PRK10575 sufC PRK10418 ABC_BcrA_bacitracin_resist ABC_DrrA tauB modC ABC_KpsT_Wzt PRK09700 COG4178 PRK11831 ABCG_White ABC_putative_ATPase ugpC btuD COG4559 COG4674 PvdE SapF PRK10535 PRK10253 PRK10261 ABC_FeS_Assembly phnK ABC_Carb_Monos_II PRK10419 TagH PhnK protein|multidrug resistance protein, putative, expressed",2.4731069]
[null,"29.5.11","protein.degradation.ubiquitin","Os01g0962400","Transcript","weakly similar to ( 141) AT1G77710 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 170 Blast hits to 170 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). | chr1:29206750-29207895 FORWARDweakly similar to ( 150) UFM1_ORYSA Probable ubiquitin-fold modifier 1 precursor - Oryza sativa (Rice) Ufm1 UPF0185 protein|ubiquitin-fold modifier 1 precursor, putative, expressed",-1.1963295,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0218700","Transcript","highly similar to ( 793) AT1G54350 | Symbols: | ABC transporter family protein | chr1:20286917-20290245 FORWARD COG4178 ABC_membrane_2 SunT ABCD_peroxisomal_ALDP MdlB SbmA CydD CydC SbmA_BacA PRK12369 ABC_cobalt_CbiO_domain1 PRK11160 ABC_tran PRK11098 ArpD PRK11174 ABCC_bacteriocin_exporters ABCC_Glucan_exporter_like CbiO ABC_NikE_OppD_transporters ABCC_MRP_domain2 ABC_MJ0796_Lo1CDE_FtsE protein|ABC transporter, ATP-binding protein, putative, expressed",1.862698]
[null,29.6,"protein.folding","Os02g0102900","Transcript","highly similar to ( 845) AT3G13470 | Symbols: | chaperonin, putative | chr3:4389685-4392624 FORWARDhighly similar to ( 841) RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) GroEL groEL groEL groEL groEL groEL groEL GroL Cpn60_TCP1 chaperonin_type_I_II chaperonin_like cpn60 protein|T-complex protein, putative, expressed",-1.232772,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0770500","Transcript","moderately similar to ( 301) AT4G33460 | Symbols: ATNAP13, EMB2751 | ATNAP13; transporter | chr4:16098325-16100113 REVERSEvery weakly similar to (83.2) CYSA_MESVI Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride ABC_cobalt_CbiO_domain1 CbiO FepC ABC_Carb_Solutes_like CcmA PotA ABC_Iron-Siderophores_B12_Hemin ABC_NrtD_SsuB_transporters ABC_PotA_N TauB ZnuC ABC_tran ABC_cobalt_CbiO_domain2 ABC_MJ0796_Lo1CDE_FtsE MalK ABC_Metallic_Cations CysA potA SalX DppF AbcC ABCC_MRP_Like COG1123 ABC_Org_Solvent_Resistant fecE ABC_ATPase ABC_CysA_sulfate_importer SunT CydD GlnQ ABC_subfamily_A MglA ABC_MetN_methionine_transporter fbpC ABC_ModC_like ABC_ModC_molybdenum_transporter ABC_MalK_N ABC_MTABC3_MDL1_MDL2 ThiQ potG tauB ABC_PstB_phosphate_transporter ABC_PhnC_transporter TauB COG3638 ABC_HisP_GlnQ_permeases ABC_DR_subfamily_A ModF COG4559 ABC_NikE_OppD_transporters ABC_Mj1267_LivG_branched ABCC_ATM1_transporter ABCC_MRP_domain1 ProV ABC_Class3 PRK11174 COG4152 AppF ABC_DrrA metN LivG ABC_Pro_Gly_Bertaine MdlB FtsE OpuBA ABC_ThiQ_thiamine_transporter Ttg2A ABC_Carb_Monos_I ABC_putative_ATPase PhnK ABC_drug_resistance_like CeuD Uup ABCC_MsbA ABC_OpuCA_Osmoprotection PstB ABCC_bacteriocin_exporters TagH artP ArtP ABC_KpsT_Wzt ABCC_Protease_Secretion COG4619 NatA PRK10851 DppD ABC_NatA_sodium_exporter CydC ABCC_cytochrome_bd ABC_BcrA_bacitracin_resist COG3845 thiQ ABC_TM1139_LivF_branched ABCC_TAP PRK10247 ABCC_Glucan_exporter_like btuD COG4586 COG4172 PRK11160 araG ABC_FtsE_transporter PRK10908 ssuB PRK09700 PRK10253 ugpC PRK11819 PRK03695 COG1245 PRK11000 PRK11264 ABC_YhbG LivF COG4181 PRK10575 CcmA ABC_NatA_like ABCG_EPDR ABCC_Hemolysin PRK10070 protein|ABC transporter, ATP-binding protein, putative, expressed",1.1925329]
[null,"29.2.1.2.1.4","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4","Os02g0105900","Transcript","moderately similar to ( 434) AT5G58420 | Symbols: | 40S ribosomal protein S4 (RPS4D) | chr5:23619599-23620896 FORWARDmoderately similar to ( 467) RS4_ORYSA 40S ribosomal protein S4 (SCAR protein SS620) - Oryza sativa (Rice) RPS4A PRK04313 Ribosomal_S4e protein|40S ribosomal protein S4, putative, expressed",-1.1409374,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0528900","Transcript","nearly identical (1677) AT3G53480 | Symbols: PDR9, ATPDR9, ABCG37 | PDR9 (PLEIOTROPIC DRUG RESISTANCE 9); ATPase, coupled to transmembrane movement of substances | chr3:19825366-19831644 FORWARDnearly identical (1747) PDR3_TOBAC Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane ABC_PDR_domain1 CcmA ABC_Metallic_Cations ABC_drug_resistance_like ZnuC ABC_cobalt_CbiO_domain1 FepC ABC_subfamily_A ABC_tran ABC_MJ0796_Lo1CDE_FtsE ABC_Carb_Solutes_like ABC_ATPase PotA CbiO ABC_cobalt_CbiO_domain2 SalX ABC_Mj1267_LivG_branched CydD ABC_NatA_sodium_exporter ABC_Org_Solvent_Resistant ABC_PhnC_transporter ABC_PstB_phosphate_transporter MglA SunT ABC_DR_subfamily_A NatA ABC_Class3 ABCC_MRP_Like ABC_BcrA_bacitracin_resist ABC_Iron-Siderophores_B12_Hemin araG CysA ABC_FtsE_transporter MalK ABC_NrtD_SsuB_transporters ABCC_MsbA ABC_TM1139_LivF_branched ArpD ABC_DrrA ModF Ttg2A CeuD COG3638 ABCC_Glucan_exporter_like COG1123 MdlB protein|pleiotropic drug resistance protein 15, putative, expressed",-1.7046064]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0110600","Transcript","moderately similar to ( 429) AT2G28250 | Symbols: NCRK | NCRK; kinase | chr2:12044004-12046339 FORWARDmoderately similar to ( 207) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Syk_like PTKc_Srm_Brk PTKc_Itk PTKc_Trk PTKc_Fes_like PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_Tec_like PTKc_Ror PTKc_Met_Ron PTKc_EphR PTKc_InsR_like PTKc_EGFR_like PTKc_Jak1_rpt2 PTKc_Yes PTKc_Fyn_Yrk PTKc_DDR PTKc_Tec_Rlk PTKc_Tyk2_rpt2 PTKc_Lck_Blk PTKc_Aatyk PTKc_Abl PTKc_Ack_like PTKc_c-ros PTKc_Fer PTKc_Fes PTKc_Ror1 PTKc_Chk PTKc_Btk_Bmx PTKc_Lyn PTKc_ALK_LTK PTKc_Src PTKc_EphR_A2 PTK_CCK4 PTKc_TrkC PTKc_PDGFR PTKc_FGFR PTKc_EphR_B PTKc_RET protein|protein kinase, putative, expressed",2.8315868,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os05g0137200","Transcript","highly similar to ( 674) AT1G02520 | Symbols: PGP11 | PGP11 (P-GLYCOPROTEIN 11); ATPase, coupled to transmembrane movement of substances | chr1:524134-528745 FORWARDmoderately similar to ( 404) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB PRK11176 SunT ABCC_MsbA ABCC_ATM1_transporter ATM1 ABCC_Glucan_exporter_like ABCC_TAP ABCC_Hemolysin ABCC_MRP_Like CydD CydC ABCC_bacteriocin_exporters PRK10789 PRK11160 ABCC_MRP_domain2 PRK10790 PRK11174 ArpD ABC_PstB_phosphate_transporter AbcC ABCC_MRP_domain1 ABCC_cytochrome_bd ABC_cobalt_CbiO_domain1 ABC_Org_Solvent_Resistant ABC_MetN_methionine_transporter ABCC_NFT1 ABCC_Protease_Secretion ABC_Carb_Solutes_like ABCC_SUR2 PotA ABC_Class3 FepC ABC_tran OpuBA ABC_NikE_OppD_transporters PstB ABC_MJ0796_Lo1CDE_FtsE ABC_NrtD_SsuB_transporters ABC_OpuCA_Osmoprotection GlnQ CcmA ABC_PhnC_transporter SalX Ttg2A MalK COG1123 CbiO COG3638 ABC_membrane ABC_Pro_Gly_Bertaine ABC_DR_subfamily_A TauB ABC_PotA_N ABC_HisP_GlnQ_permeases CysA ABC_CysA_sulfate_importer potA FtsE ABC_Iron-Siderophores_B12_Hemin NatA ProV DppF ABC_ModC_like ABC_drug_resistance_like ABC_FtsE_transporter DppD ABC_MalK_N AppF MglA ABC_ModC_molybdenum_transporter glnQ metN PRK10070 ABC_Metallic_Cations COG4619 ABC_NatA_sodium_exporter ABC_subfamily_A PRK11264 COG4172 PRK10247 ThiQ ZnuC artP potG CeuD PRK10851 ABC_Mj1267_LivG_branched ModF TauB Uup ABC_cobalt_CbiO_domain2 thiQ LivF ABC_TM1139_LivF_branched dppF PRK10744 fbpC tauB ArtP COG3845 YhbG PRK10419 ABCC_CFTR2 ABC_BcrA_bacitracin_resist ABC_ThiQ_thiamine_transporter PhnK HisP LivG ABC_putative_ATPase COG4181 ABCC_SUR1_N ModC ABC_YhbG ABC_Carb_Monos_I fecE ABCG_EPDR COG4559 PRK10535 ABCC_CFTR1 PRK11831 modC COG4178 btuD ssuB PRK10575 PRK10522 PRK10762 PRK10908 PhnK PvdE PRK11000 phnK ABC_KpsT_Wzt protein|ABC transporter, ATP-binding protein, putative, expressed",1.8693342]
[null,"29.5.5","protein.degradation.serine protease","Os02g0114200","Transcript","highly similar to ( 686) AT3G10410 | Symbols: scpl49 | scpl49 (serine carboxypeptidase-like 49); serine-type carboxypeptidase | chr3:3235518-3238063 REVERSEnearly identical (1031) CBP3_ORYSA Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) Peptidase_S10 COG2939 protein|OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed",1.4250225,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os04g0413000","Transcript","moderately similar to ( 429) AT5G03910 | Symbols: ATATH12, ATH12 | ATATH12; ATPase, coupled to transmembrane movement of substances / transporter | chr5:1054313-1057105 REVERSEweakly similar to ( 107) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB SunT ABCC_MsbA PRK11176 ABC_MTABC3_MDL1_MDL2 ABCC_Glucan_exporter_like CydD ATM1 ABCC_ATM1_transporter ABCC_Hemolysin ABCC_MRP_Like ABCC_TAP PRK10789 ABCC_bacteriocin_exporters ABCC_MRP_domain2 CydC PRK11160 PRK11174 ArpD ABCC_MRP_domain1 PRK10790 ABCC_Protease_Secretion ABC_cobalt_CbiO_domain1 SalX AbcC ABC_tran CcmA ABC_PstB_phosphate_transporter CbiO ABCC_cytochrome_bd ABC_NrtD_SsuB_transporters ZnuC ABC_NikE_OppD_transporters FepC ABC_MJ0796_Lo1CDE_FtsE AppF ABC_MetN_methionine_transporter ABC_Carb_Solutes_like PotA ABCC_SUR2 ABC_ATPase COG1123 ABCC_NFT1 ABC_Iron-Siderophores_B12_Hemin ABC_Metallic_Cations TauB ABC_DR_subfamily_A MalK ABC_cobalt_CbiO_domain2 GlnQ OpuBA ABC_Class3 ABC_PotA_N PstB ABC_OpuCA_Osmoprotection ABC_MalK_N ABC_HisP_GlnQ_permeases DppD DppF ABCC_CFTR1 ABC_Org_Solvent_Resistant potA FtsE COG4178 ABC_PhnC_transporter ABC_BcrA_bacitracin_resist ABCC_SUR1_N COG3638 ABC_Carb_Monos_I MglA ABC_ModC_like Uup ABC_CysA_sulfate_importer ABC_subfamily_A COG4172 ABC_Pro_Gly_Bertaine COG3845 ABC_TM1139_LivF_branched Ttg2A CysA ABC_KpsT_Wzt ABCC_CFTR2 TagH PRK10744 ABCG_EPDR ABCF_EF-3 ABCG_White ABC_drug_resistance_like ABC_Mj1267_LivG_branched ProV metN ABC_FtsE_transporter ThiQ NatA ssuB LivF PRK11000 TauB LivG ABC_DrrA ABC_putative_ATPase PRK10851 ugpC PRK10419 PRK11264 protein|ABC transmembrane transporter domain containing protein, expressed",0.99624175]
[null,29.5,"protein.degradation","Os02g0117400","Transcript","moderately similar to ( 488) AT2G03120 | Symbols: ATSPP | ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase | chr2:937554-940083 FORWARD Peptidase_A22B PSN protein|signal peptide peptidase domain containing protein, expressed",-1.1048995,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0177900","Transcript","highly similar to ( 938) AT2G26910 | Symbols: PDR4, ATPDR4 | PDR4 (PLEIOTROPIC DRUG RESISTANCE 4); ATPase, coupled to transmembrane movement of substances | chr2:11481623-11487874 FORWARDnearly identical (1182) PDR6_ORYSA Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White CcmA ABC2_membrane ABC_PDR_domain1 ABC_subfamily_A ABC_tran ABC_cobalt_CbiO_domain1 ABC_drug_resistance_like ZnuC ABC_MJ0796_Lo1CDE_FtsE ABC_Metallic_Cations SalX FepC ABC_PhnC_transporter CbiO ABC_DR_subfamily_A ABC_Carb_Solutes_like ABC_ATPase ABC_Iron-Siderophores_B12_Hemin ABC_Mj1267_LivG_branched SunT ABC_cobalt_CbiO_domain2 CydD ABC_Class3 ABC_BcrA_bacitracin_resist ABC_NatA_sodium_exporter ABCC_MRP_Like PotA COG3638 ABC_FtsE_transporter ABC_NrtD_SsuB_transporters MglA TauB NatA CysA ABC_Org_Solvent_Resistant COG1123 ABCC_Protease_Secretion MalK ABC_putative_ATPase COG4152 ABC_ModC_molybdenum_transporter CeuD protein|pleiotropic drug resistance protein 4, putative, expressed",3.2658243]
[null,"29.2.3","protein.synthesis.initiation","Os02g0122300","Transcript","very weakly similar to (95.1) AT1G66070 | Symbols: | translation initiation factor-related | chr1:24596194-24597520 REVERSE eIF3_subunit protein|translation initiation factor eIF3 subunit, putative, expressed",-1.0302063,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os06g0554800","Transcript","nearly identical (1617) AT3G16340 | Symbols: ATPDR1, PDR1 | PDR1; ATPase, coupled to transmembrane movement of substances | chr3:5539897-5546263 FORWARDnearly identical (2237) PDR12_ORYSA Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane CcmA ABC_PDR_domain1 ABC_subfamily_A ABC_drug_resistance_like ABC_tran ABC_cobalt_CbiO_domain1 ABC_Metallic_Cations ZnuC FepC ABC_Mj1267_LivG_branched CbiO ABC_cobalt_CbiO_domain2 ABC_MJ0796_Lo1CDE_FtsE SalX ABC_Carb_Solutes_like ABC_BcrA_bacitracin_resist SunT ABC_NatA_sodium_exporter PotA ABC_Iron-Siderophores_B12_Hemin PDR_assoc CysA ABC_DR_subfamily_A ABC_Org_Solvent_Resistant NatA CydD ABC_PhnC_transporter ABC_Class3 MglA CeuD ABC_putative_ATPase ABC_TM1139_LivF_branched MalK sufC ABC_PstB_phosphate_transporter ABC_ModC_molybdenum_transporter LivG ABC_DrrA COG4152 COG4559 ABC_NrtD_SsuB_transporters ModF ABC_YhbG ABC_ATPase protein|ABC-2 type transporter, putative, expressed",1.4269619]
[null,29.4,"protein.postranslational modification","Os02g0135300","Transcript","moderately similar to ( 462) AT1G02970 | Symbols: WEE1, ATWEE1 | WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG); kinase/ protein kinase | chr1:673408-676127 FORWARDvery weakly similar to (90.1) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) Pkinase S_TKc S_TKc SPS1 Pkinase_Tyr PTKc TyrKc protein|wee1-like protein kinase, putative, expressed",-1.3554794,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os06g0184766","Transcript","nearly identical (1297) AT2G07680 | Symbols: ATMRP11 | ATMRP11; ATPase, coupled to transmembrane movement of substances | chr2:3515637-3522491 FORWARDweakly similar to ( 167) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABCC_MRP_domain2 ABCC_MRP_domain1 MdlB SunT ABCC_NFT1 ABCC_Glucan_exporter_like ABCC_SUR2 PRK11176 CydC CydD ABCC_MsbA ABCC_MRP_Like ABC_MTABC3_MDL1_MDL2 PRK10790 PRK11160 ABCC_ATM1_transporter ABCC_Hemolysin ABCC_bacteriocin_exporters ABCC_CFTR1 PRK11174 ABCC_CFTR2 ATM1 ABCC_SUR1_N ABCC_Protease_Secretion ABCC_TAP CcmA ABC_tran ABCC_cytochrome_bd PRK10789 FepC ABC_cobalt_CbiO_domain1 ABC_membrane ArpD ABC_PstB_phosphate_transporter ABC_NikE_OppD_transporters AbcC TauB CbiO COG1123 ABC_Metallic_Cations ZnuC ABC_NrtD_SsuB_transporters ABC_ATPase ABC_Org_Solvent_Resistant ABC_PhnC_transporter ABC_TM1139_LivF_branched ABC_Mj1267_LivG_branched SalX COG3638 ABC_Carb_Solutes_like ABC_DR_subfamily_A MalK ABC_BcrA_bacitracin_resist DppF ABC_MJ0796_Lo1CDE_FtsE ABC_Iron-Siderophores_B12_Hemin FtsE ABC_MetN_methionine_transporter ABC_subfamily_A PotA NatA DppD ABC_drug_resistance_like ABC_Class3 LivF COG4178 MglA ABC_MalK_N OpuBA PhnK YhbG GlnQ AppF ABC_NatA_sodium_exporter ABC_FtsE_transporter LivG fecE PstB PvdE ABC_KpsT_Wzt TagH ABC_DrrA ABCD_peroxisomal_ALDP ABC_YhbG ABC_OpuCA_Osmoprotection Ttg2A PRK11000 ABCG_EPDR COG4172 COG3845 Uup ABC_PotA_N ABC_ModC_like metN CysA glnQ PRK10522 protein|multidrug resistance-associated protein 11, putative, expressed",-1.0436883]
[null,"29.2.1.1.1.2.3","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3","Os02g0137200","Transcript","moderately similar to ( 301) AT2G43030 | Symbols: | ribosomal protein L3 family protein | chr2:17894898-17895713 FORWARDmoderately similar to ( 310) RK3_TOBAC 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) rplC rpl3 RplC Ribosomal_L3 protein|ribosomal protein L3, putative, expressed",1.9851907,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os03g0280000","Transcript","nearly identical (2008) AT3G55320 | Symbols: PGP20 | PGP20 (P-GLYCOPROTEIN 20); ATPase, coupled to transmembrane movement of substances | chr3:20507391-20513393 REVERSEmoderately similar to ( 412) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB ABC_MTABC3_MDL1_MDL2 SunT ABCC_MsbA ABCC_Glucan_exporter_like PRK11176 ABCC_ATM1_transporter ATM1 ABCC_Hemolysin ABCC_TAP CydC ABCC_bacteriocin_exporters PRK11160 CydD ABCC_MRP_Like ABCC_MRP_domain2 PRK10790 PRK10789 ArpD PRK11174 ABCC_NFT1 ABCC_MRP_domain1 ABC_cobalt_CbiO_domain1 ABCC_cytochrome_bd AbcC ABC_tran ABC_PstB_phosphate_transporter ABCC_Protease_Secretion SalX ABC_MetN_methionine_transporter ABCC_SUR2 FepC ABC_membrane ABC_NikE_OppD_transporters CcmA GlnQ CbiO OpuBA ABC_Carb_Solutes_like ABC_OpuCA_Osmoprotection ABC_MJ0796_Lo1CDE_FtsE MalK ABC_Org_Solvent_Resistant COG1123 ABC_NrtD_SsuB_transporters PstB PotA ABC_PhnC_transporter ABC_Class3 COG3638 ABC_HisP_GlnQ_permeases ABC_Mj1267_LivG_branched ABC_Pro_Gly_Bertaine MglA metN TauB Ttg2A CysA DppD ProV ABC_TM1139_LivF_branched ABC_DR_subfamily_A ZnuC ABC_Iron-Siderophores_B12_Hemin LivG ABC_FtsE_transporter potA ABC_ATPase LivF ABC_PotA_N glnQ DppF ABC_subfamily_A FtsE ABCC_CFTR1 ABC_ModC_like ABCG_EPDR ThiQ ABCG_White PRK10535 ABC_Metallic_Cations COG3845 COG4619 COG4172 ABC_ThiQ_thiamine_transporter ABC_CysA_sulfate_importer ABC_cobalt_CbiO_domain2 TauB ABCC_CFTR2 ABCC_SUR1_N ABC_MalK_N fecE HisP CeuD NatA ABC_BcrA_bacitracin_resist AppF PRK10744 SapF artP PRK10070 sufC ABC_ModC_molybdenum_transporter ModF PhnK potG TagH ArtP ABC_drug_resistance_like PRK11264 PRK10619 thiQ araG ABC_Carb_Monos_I PRK10247 ABC_KpsT_Wzt PvdE ABC_NatA_sodium_exporter btuD livG ABC_YhbG PRK10522 dppF protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0695858]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os02g0178400","Transcript","very weakly similar to (92.8) AT5G50460 | Symbols: | protein transport protein SEC61 gamma subunit, putative | chr5:20552168-20552509 REVERSEweakly similar to ( 101) SC61G_ORYSA Protein transport protein SEC61 subunit gamma - Oryza sativa (Rice) protein|protein transport protein SEC61 subunit gamma, putative, expressed",-1.1304274,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,29.4,"protein.postranslational modification","Os02g0180000","Transcript","highly similar to ( 571) AT4G31860 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr4:15406685-15408589 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",1.4267823,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0318500","Transcript","highly similar to ( 758) AT1G66950 | Symbols: PDR11, ATPDR11 | PDR11 (PLEIOTROPIC DRUG RESISTANCE 11); ATPase, coupled to transmembrane movement of substances | chr1:24978239-24984461 FORWARDhighly similar to ( 882) PDR5_ORYSA Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane ABC_PDR_domain1 CcmA ABC_subfamily_A ABC_drug_resistance_like ABC_tran ABC_MJ0796_Lo1CDE_FtsE ABC_cobalt_CbiO_domain1 ZnuC FepC CydD ABC_Metallic_Cations MglA SalX PotA COG1123 CbiO ABC_Mj1267_LivG_branched ABC_Carb_Solutes_like SunT ABC_Org_Solvent_Resistant ABC_PstB_phosphate_transporter NatA ABC_BcrA_bacitracin_resist ABC_cobalt_CbiO_domain2 ABC_DR_subfamily_A COG3638 ABC_NikE_OppD_transporters ABC_FtsE_transporter araG ABC_NatA_sodium_exporter CysA protein|ABC-2 type transporter family protein, expressed",1.5206984]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0182500","Transcript","moderately similar to ( 377) AT1G21720 | Symbols: PBC1 | PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase | chr1:7626394-7628070 FORWARDmoderately similar to ( 402) PSB3_ORYSA Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) proteasome_beta_type_3 proteasome_beta proteasome_protease_HslV Proteasome PRE1 proteasome_beta_archeal Ntn_hydrolase proteasome_beta_type_1 protein|peptidase, T1 family, putative, expressed",-0.9764131,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0121700","Transcript","highly similar to ( 932) AT2G01320 | Symbols: | ABC transporter family protein | chr2:154669-158063 REVERSEmoderately similar to ( 248) PDR15_ORYSA Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) ABCG_EPDR ABCG_White CcmA ABC_PDR_domain2 ABC_PDR_domain1 ABC2_membrane SalX ABC_cobalt_CbiO_domain1 ABC_MJ0796_Lo1CDE_FtsE ABC_tran FepC ABC_subfamily_A ABC_Metallic_Cations ZnuC CbiO ABC_Mj1267_LivG_branched ABC_drug_resistance_like TauB ABC_DR_subfamily_A ABC_PhnC_transporter ABC_Org_Solvent_Resistant PotA ABC_NrtD_SsuB_transporters CydD ABC_Iron-Siderophores_B12_Hemin NatA CysA ABC_Carb_Solutes_like LivG ABC_PstB_phosphate_transporter ABC_ATPase MalK ABC_YhbG COG3638 GlnQ ABC_putative_ATPase ABC_Class3 SunT COG1123 Ttg2A ABC_cobalt_CbiO_domain2 ABCC_MRP_Like YhbG ABC_HisP_GlnQ_permeases COG4559 ABC_BcrA_bacitracin_resist ABC_ModC_molybdenum_transporter DppD ABC_NikE_OppD_transporters ABC_NatA_sodium_exporter ABCC_Glucan_exporter_like ABC_TM1139_LivF_branched MglA ABC_FtsE_transporter MdlB CeuD PRK10535 ABC_ModC_like TauB ABC_CysA_sulfate_importer PRK11160 ThiQ COG4152 CydC COG3845 ABC_NatA_like OpuBA PRK11174 ABCC_ATM1_transporter ModF DppF LivF btuD AbcC fecE ABCC_MsbA FtsE PRK09984 COG4181 ABC_MTABC3_MDL1_MDL2 COG4619 ABC_OpuCA_Osmoprotection ABCC_MRP_domain1 ABC_DrrA PRK11264 Uup ABCC_bacteriocin_exporters ABC_ThiQ_thiamine_transporter ABC_PotA_N ABC_MetN_methionine_transporter PRK10895 tauB ABCC_Hemolysin PRK10851 ModC ABCC_Protease_Secretion COG4136 PhnK fbpC protein|white-brown complex homolog protein 7, putative, expressed",1.1929636]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0182600","Transcript","moderately similar to ( 446) AT2G25220 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr2:10742918-10745540 REVERSEweakly similar to ( 195) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc Pkinase_Tyr Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_Tec_like PTKc_Csk_like SPS1 PTKc_Src_like PTKc_c-ros PTKc_Trk PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR PTKc_ALK_LTK PTKc_Ror PTKc_DDR PTKc_Tec_Rlk PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_Itk PTKc_InsR_like PTK_CCK4 PTKc_Chk PTKc_EGFR_like PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_A2 PTKc_Abl PTKc_Lck_Blk PTKc_Fer PTKc_Ack_like PTKc_Fyn_Yrk PTKc_Syk_like PTKc_Lyn PTKc_Src PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Axl_like PTKc_TrkA PTKc_Fes PTKc_TrkB PTKc_Jak1_rpt2 PTKc_FGFR4 PTKc_DDR_like PTKc_TrkC PTKc_Yes PTK_HER3 PTKc_IGF-1R PTKc_Hck PTKc_Tyk2_rpt2 PTKc_DDR1 PTKc_EphR_A PTKc_Tyro3 PTKc_EphR_B PTKc_DDR2 PTKc_Syk PTKc_Tie1 PTKc_Ror1 protein|protein kinase family protein, putative, expressed",2.863436,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os08g0167000","Transcript","highly similar to ( 689) AT1G31770 | Symbols: | ABC transporter family protein | chr1:11375252-11377644 REVERSEweakly similar to ( 132) PDR13_ORYSA Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) ABCG_White ABCG_EPDR CcmA ABC_PDR_domain2 ABC_PDR_domain1 ABC2_membrane ABC_Carb_Solutes_like ABC_MJ0796_Lo1CDE_FtsE ABC_tran PotA SalX ABC_NrtD_SsuB_transporters ABC_subfamily_A ABC_Org_Solvent_Resistant ABC_cobalt_CbiO_domain1 CysA GlnQ FepC ABC_ModC_molybdenum_transporter TauB ZnuC ABC_Metallic_Cations ABC_PhnC_transporter MalK ABC_Class3 ABC_HisP_GlnQ_permeases ABC_Mj1267_LivG_branched COG3638 ABC_drug_resistance_like SunT OpuBA ABC_DR_subfamily_A COG1123 ABC_ModC_like ABC_Iron-Siderophores_B12_Hemin ABC_putative_ATPase LivG ABC_PotA_N Ttg2A ABC_NikE_OppD_transporters ABCC_ATM1_transporter ABCC_MRP_Like ABC_PstB_phosphate_transporter COG4152 DppF CbiO COG4181 ABC_BcrA_bacitracin_resist ABC_CysA_sulfate_importer NatA CydD PRK11264 TauB LivF DppD ABC_TM1139_LivF_branched ABC_cobalt_CbiO_domain2 ABC_DrrA ABC_MalK_N PRK10584 ABCC_MsbA MdlB ModF ABC_OpuCA_Osmoprotection potA MglA COG4559 CydC PRK10851 artP COG3845 ABC_NatA_sodium_exporter FtsE AbcC ABC_Pro_Gly_Bertaine ABC_MetN_methionine_transporter sufC ABC_YhbG tauB COG4172 ArtP ABC_FtsE_transporter COG4136 ABCC_bacteriocin_exporters ATM1 ABCC_Glucan_exporter_like glnQ PRK09984 ModC CeuD ABC_ATPase Uup ThiQ PRK11160 YhbG lolD PRK11000 PRK10535 PRK03695 COG4619 ABC_MTABC3_MDL1_MDL2 ABCC_Hemolysin ArpD fecE COG4674 ABC_NatA_like ABC_ThiQ_thiamine_transporter HisP protein|ABC-2 type transporter domain containing protein, expressed",1.2633623]
[null,"29.2.1.99.1.21","protein.synthesis.ribosomal protein.unknown.small subunit.S21","Os02g0189000","Transcript","protein|ribosome, putative, expressed",1.8019034,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os08g0384500","Transcript","nearly identical (1030) AT1G15520 | Symbols: PDR12, ATPDR12 | PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances | chr1:5331993-5338175 REVERSEnearly identical (1121) PDR3_ORYSA Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane CcmA ABC_PDR_domain1 ABC_drug_resistance_like ABC_subfamily_A ABC_cobalt_CbiO_domain1 ABC_tran FepC ZnuC ABC_MJ0796_Lo1CDE_FtsE SalX ABC_Metallic_Cations PotA PDR_assoc ABC_cobalt_CbiO_domain2 ABC_Carb_Solutes_like CbiO SunT ABC_Iron-Siderophores_B12_Hemin CydD ABC_DR_subfamily_A ABC_Mj1267_LivG_branched ABC_Org_Solvent_Resistant ABC_Class3 ABC_PhnC_transporter MalK CysA ABC_FtsE_transporter MglA ABC_NatA_sodium_exporter COG3638 NatA ABC_NikE_OppD_transporters ABC_DrrA COG1123 ABC_BcrA_bacitracin_resist ABC_PstB_phosphate_transporter ABC_NrtD_SsuB_transporters TauB ABCC_MRP_Like ABC_TM1139_LivF_branched ABCC_bacteriocin_exporters LivG ABC_ModC_molybdenum_transporter FtsE fecE sufC CcmA ABC_YhbG ABCC_Glucan_exporter_like Ttg2A AbcC GlnQ LivF araG COG4181 protein|pleiotropic drug resistance protein 3, putative, expressed",-1.337289]
[null,29.5,"protein.degradation","Os02g0218200","Transcript","nearly identical (1154) AT4G33090 | Symbols: APM1, ATAPM1 | APM1 (AMINOPEPTIDASE M1); aminopeptidase | chr4:15965915-15970418 REVERSE PepN Peptidase_M1 protein|puromycin-sensitive aminopeptidase, putative, expressed",-1.225317,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0695800","Transcript","highly similar to ( 716) AT2G47000 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase | chr2:19310008-19314750 REVERSEmoderately similar to ( 470) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB ABC_MTABC3_MDL1_MDL2 SunT PRK11176 ABCC_MsbA ABCC_ATM1_transporter ATM1 ABCC_Glucan_exporter_like ABCC_Hemolysin ABCC_TAP CydD PRK10789 ABCC_MRP_Like ABCC_bacteriocin_exporters CydC PRK11160 PRK10790 PRK11174 ABCC_MRP_domain2 ArpD ABC_PstB_phosphate_transporter AbcC ABC_cobalt_CbiO_domain1 ABCC_Protease_Secretion COG1123 ABCC_NFT1 GlnQ ABCC_cytochrome_bd ABC_tran ABCC_MRP_domain1 ABC_NikE_OppD_transporters CbiO DppD ABC_MetN_methionine_transporter SalX ABC_MJ0796_Lo1CDE_FtsE DppF OpuBA ABC_membrane ABC_Org_Solvent_Resistant ABCC_SUR2 CcmA ABC_Carb_Solutes_like PotA ABC_NrtD_SsuB_transporters FepC PstB ABC_OpuCA_Osmoprotection MalK Ttg2A TauB ABC_PhnC_transporter ABC_Class3 AppF COG3638 ABC_HisP_GlnQ_permeases ABC_DR_subfamily_A ZnuC ABC_Iron-Siderophores_B12_Hemin CysA dppF ABC_PotA_N ABC_ModC_like ABC_Pro_Gly_Bertaine ABC_Metallic_Cations COG4172 FtsE MglA ProV NatA metN COG3845 PRK11264 ABC_CysA_sulfate_importer fbpC ThiQ ABC_cobalt_CbiO_domain2 ABC_MalK_N COG4619 potA ABC_FtsE_transporter HisP ABC_drug_resistance_like ABC_NatA_sodium_exporter ABC_ModC_molybdenum_transporter ABC_Mj1267_LivG_branched glnQ ABC_TM1139_LivF_branched ModF ABCC_CFTR2 ABCC_CFTR1 ModC ABCC_SUR1_N ABC_subfamily_A LivG ABC_ThiQ_thiamine_transporter PRK10744 PRK10070 PRK10851 PhnK LivF TauB artP Uup COG4178 ABC_putative_ATPase tauB PRK10419 modC thiQ sufC potG PRK10247 PRK10619 ABC_BcrA_bacitracin_resist COG4181 CeuD ArtP PRK10535 ABC_YhbG YhbG fecE ABC_DrrA ABC_Carb_Monos_I araG ssuB phnK PRK10575 ABCG_EPDR ABC_KpsT_Wzt PRK11831 PRK10261 TagH PvdE ugpC COG4136 ABCG_White COG4559 lolD btuD COG4674 PhnK livG SapF ABC_FeS_Assembly ABC_ATPase ABCD_peroxisomal_ALDP PRK10418 PRK11000 PRK10908 protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0602475]
[null,"29.2.4","protein.synthesis.elongation","Os02g0220500","Transcript","moderately similar to ( 360) AT1G09640 | Symbols: | elongation factor 1B-gamma, putative / eEF-1B gamma, putative | chr1:3120162-3122152 FORWARDmoderately similar to ( 320) EF1G2_ORYSA Elongation factor 1-gamma 2 (EF-1-gamma 2) (eEF-1B gamma 2) - Oryza sativa (Rice) EF1G protein|elongation factor 1-gamma, putative, expressed",-1.0122665,{"$nulls":8},34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0805800","Transcript","highly similar to ( 726) AT2G39190 | Symbols: ATATH8 | ATATH8; transporter | chr2:16350140-16355745 FORWARD AarF ubiB ABC1 protein| ELMO/CED-12 family protein, putative, expressed",1.9323982]
[null,29.4,"protein.postranslational modification","Os02g0241600","Transcript","highly similar to ( 917) AT3G58640 | Symbols: | protein kinase family protein | chr3:21687153-21692675 REVERSEweakly similar to ( 109) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase PTKc_Csk_like PTKc_Src_like PTKc_EphR PTKc_Tec_like PTKc_Frk_like PTKc_Abl PTKc_InsR_like PTKc_FAK PTKc_Tec_Rlk PTKc_Chk PTKc_Btk_Bmx PTKc_Itk PTKc_EGFR_like PTKc_Ack_like PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_FGFR PTKc_Lck_Blk PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Yes PTKc_Fyn_Yrk PTKc_Src PTK_CCK4 PTKc_EphR_A PTKc_DDR PTKc_c-ros PTKc_Syk_like PTKc_Musk PTKc_RET PTKc_Csk PTKc_Trk PTKc_EphR_B PTKc_Ror PTKc_FGFR2 PTKc_PDGFR PTKc_HER4 PTKc_DDR2 PTKc_FGFR3 PTKc_DDR_like PTKc_FGFR4 PTKc_TrkA SPS1 PTKc_Axl PTKc_Lyn PTKc_Axl_like PTKc_IGF-1R PTKc_FGFR1 PTKc_Met_Ron PTKc_Fes PTKc_DDR1 PTK_Ryk PTKc_TrkC PTKc_Tie1 PTKc_HER2 PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR PTKc_Aatyk PTKc_EGFR PTKc_TrkB PTKc_Tie PTKc_Tie2 PTKc_Tyro3 PTKc_Fer PTKc_Jak1_rpt2 PTKc_Zap-70 PTKc_Syk PTKc_Aatyk2 PTKc_VEGFR PTKc_VEGFR2 PTKc_Ror1 PTKc_EphR_A10 PTKc_Ror2 PTK_HER3 PTKc_Tyk2_rpt2 PTKc_Aatyk1_Aatyk3 PTKc_PDGFR_alpha PTKc_Kit PTKc_VEGFR3 PTKc_PDGFR_beta protein|protein kinase domain containing protein, expressed",1.3957996,{"$nulls":8},34.18,"transport.unspecified anions","Os08g0300300","Transcript","highly similar to ( 813) AT5G33280 | Symbols: | chloride channel-like (CLC) protein, putative | chr5:12549280-12552305 FORWARD ClC_6_like ClC_euk ClC_3_like Voltage_CLC EriC ClC_1_like EriC Voltage_gated_ClC PRK05277 EriC_like protein|chloride channel protein, putative, expressed",1.2744942]
[null,"29.3.5","protein.targeting.peroxisomes","Os02g0245100","Transcript","moderately similar to ( 424) AT1G29260 | Symbols: PEX7, ATPEX7 | PEX7; peroxisome matrix targeting signal-2 binding / protein binding | chr1:10224923-10225876 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9853433,{"$nulls":8},"34.19.1","transport.Major Intrinsic Proteins.PIP","Os09g0541000","Transcript","moderately similar to ( 344) AT4G35100 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | chr4:16708672-16709958 FORWARDmoderately similar to ( 465) PIP27_ORYSA Probable aquaporin PIP2.7 (Plasma membrane intrinsic protein 2.7) (OsPIP2.7) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",4.4975114]
[null,"29.2.1.1.1.2.21","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21","Os02g0259600","Transcript","weakly similar to ( 147) AT1G35680 | Symbols: | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | chr1:13208777-13210246 FORWARDweakly similar to ( 145) RK21_SPIOL 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) Ribosomal_L21p rplU RplU rpl21 protein|50S ribosomal protein L21, chloroplast precursor, putative, expressed",3.1183121,{"$nulls":8},"34.19.1","transport.Major Intrinsic Proteins.PIP","Os04g0233400","Transcript","moderately similar to ( 370) AT4G35100 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | chr4:16708672-16709958 FORWARDmoderately similar to ( 456) PIP26_ORYSA Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",3.4536438]
[null,"29.2.1.1.3.2.510","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A","Os02g0321900","Transcript","weakly similar to ( 196) AT1G08360 | Symbols: | 60S ribosomal protein L10A (RPL10aA) | chr1:2636231-2637694 FORWARDweakly similar to ( 154) RL10A_CHLRE 60S ribosomal protein L10a - Chlamydomonas reinhardtii Ribosomal_L1 RplA rpl1P protein|L1P family of ribosomal proteins domain containing protein, expressed",-0.96208924,{"$nulls":8},"34.19.2","transport.Major Intrinsic Proteins.TIP","Os06g0336200","Transcript","moderately similar to ( 265) AT3G16240 | Symbols: DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | DELTA-TIP; ammonia transporter/ methylammonium transmembrane transporter/ water channel | chr3:5505534-5506788 FORWARDmoderately similar to ( 357) TIP22_ORYSA Probable aquaporin TIP2.2 (Tonoplast intrinsic protein 2.2) (OsTIP2.2) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",3.6744316]
[null,"29.2.1.2.2.510","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A","Os02g0321900","Transcript","weakly similar to ( 196) AT1G08360 | Symbols: | 60S ribosomal protein L10A (RPL10aA) | chr1:2636231-2637694 FORWARDweakly similar to ( 154) RL10A_CHLRE 60S ribosomal protein L10a - Chlamydomonas reinhardtii Ribosomal_L1 RplA rpl1P protein|L1P family of ribosomal proteins domain containing protein, expressed",-0.96208924,{"$nulls":8},"34.19.2","transport.Major Intrinsic Proteins.TIP","Os02g0658100","Transcript","moderately similar to ( 295) AT5G47450 | Symbols: ATTIP2;3, TIP2;3, DELTA-TIP3 | AtTIP2;3; ammonia transporter/ methylammonium transmembrane transporter/ water channel | chr5:19248509-19249466 REVERSEmoderately similar to ( 362) TIP21_ORYSA Probable aquaporin TIP2.1 (Tonoplast intrinsic protein 2.1) (OsTIP2.1) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",-1.1371179]
[null,"29.3.1","protein.targeting.nucleus","Os02g0497700","Transcript","weakly similar to ( 121) AT3G25150 | Symbols: | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | chr3:9157161-9159362 REVERSE NTF2 NTF2 protein|RNA-binding protein-like, putative, expressed",-1.4602934,{"$nulls":8},"34.19.3","transport.Major Intrinsic Proteins.NIP","Os08g0462700","Transcript","moderately similar to ( 329) AT3G14000 | Symbols: ATBRXL2, BRX-LIKE2 | ATBRXL2 | chr3:4631170-4633353 REVERSE protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed",2.403643]
[null,"29.5.11","protein.degradation.ubiquitin","Os02g0504500","Transcript","moderately similar to ( 314) AT1G04850 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE PUB protein|ZOS2-07 - C2H2 zinc finger protein, expressed",-0.99577045,{"$nulls":8},34.2,"transport.porins","Os03g0137500","Transcript","moderately similar to ( 268) AT5G57490 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel | chr5:23283895-23285335 REVERSEmoderately similar to ( 236) VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) Porin_3 protein|outer mitochondrial membrane porin, putative, expressed",-1.0140386]
[null,"29.5.11.2","protein.degradation.ubiquitin.E1","Os02g0506500","Transcript","highly similar to ( 521) AT1G05350 | Symbols: | thiF family protein | chr1:1560891-1564005 REVERSE ThiF_MoeB_HesA_family ThiF PRK05690 ThiF PRK08762 PRK08644 PRK12475 Uba2_SUMO E1_enzyme_family PRK07688 YgdL_like E1-2_like PRK08328 PRK05600 E1_ThiF_like COG1179 protein|ThiF family domain containing protein, putative, expressed",-1.0128212,{"$nulls":8},34.21,"transport.calcium","Os12g0175500","Transcript","moderately similar to ( 308) AT2G38270 | Symbols: CXIP2, ATGRX2 | CXIP2 (CAX-INTERACTING PROTEIN 2); electron carrier/ protein disulfide oxidoreductase | chr2:16031347-16033054 REVERSE GRX_PICOT_like COG0278 GRX_family PRK10824 protein|OsGrx_S16 - glutaredoxin subgroup II, expressed",1.4510422]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0513000","Transcript","highly similar to ( 612) AT5G13160 | Symbols: PBS1 | PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase | chr5:4176854-4179682 FORWARDmoderately similar to ( 253) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr S_TKc TyrKc S_TKc PTKc Pkinase PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Srm_Brk PTKc_EGFR_like PTKc_Src_like SPS1 PTKc_Ror PTKc_Csk_like PTKc_Trk PTKc_Frk_like PTKc_InsR_like PTKc_TrkA PTKc_Tyk2_rpt2 PTKc_Abl PTKc_Met_Ron PTKc_Fes_like PTKc_EphR PTKc_Ack_like PTKc_Lck_Blk PTKc_TrkC PTKc_Ror1 PTKc_Tec_like PTKc_Fyn_Yrk PTKc_TrkB PTKc_Chk PTKc_Jak1_rpt2 PTKc_DDR1 PTKc_Yes PTKc_Syk_like PTKc_Src PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_PDGFR PTKc_ALK_LTK PTKc_EphR_A2 PTKc_DDR_like PTKc_Itk PTKc_FGFR PTK_HER3 PTKc_Lyn PTKc_Fes PTK_CCK4 PTKc_Ror2 PTKc_HER4 PTKc_Fer PTKc_Axl_like PTKc_Tec_Rlk PTKc_RET PTKc_DDR2 PTKc_Csk PTKc_Tie1 PTKc_EphR_B PTKc_Tie PTKc_IGF-1R PTKc_Btk_Bmx PTKc_EGFR PTKc_EphR_A PTKc_Tie2 PTKc_InsR PTKc_HER2 PTKc_FAK protein|protein kinase domain containing protein, expressed",-1.302646,{"$nulls":8},"34.23.1","transport.hormones.auxin","Os02g0224800","Transcript","moderately similar to ( 435) AT5G56750 | Symbols: | Ndr family protein | chr5:22957986-22960606 FORWARDmoderately similar to ( 363) SF21_HELAN Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) Ndr protein|pollen-specific protein SF21, putative, expressed",2.3342829]
[null,"29.2.4","protein.synthesis.elongation","Os02g0519900","Transcript","nearly identical (1622) AT1G56070 | Symbols: LOS1 | LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding | chr1:20968245-20971077 REVERSEnearly identical (1611) EF2_BETVU Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) PRK07560 FusA EF2 aeEF2_snRNP_like_IV EF2_IV_snRNP Snu114p GTP_EFTU PRK12740 GTP_translation_factor eEF2_snRNP_like_C PRK12739 EFG_IV TypA_BipA LepA PRK05433 eEF2_snRNP_like_II LepA TypA EF-G eEF2_C_snRNP TetM_like PRK00007 PRK10218 EFG_C Elongation_Factor_C EF-G_bact RF3 eEF2_II_snRNP PrfC protein|elongation factor, putative, expressed",-0.99648,{"$nulls":8},"34.23.1","transport.hormones.auxin","Os05g0196200","Transcript","highly similar to ( 514) AT5G56750 | Symbols: | Ndr family protein | chr5:22957986-22960606 FORWARDmoderately similar to ( 444) SF21_HELAN Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) Ndr protein|pollen-specific protein SF21, putative, expressed",1.64965]
[null,29.6,"protein.folding","Os02g0535000","Transcript","moderately similar to ( 314) AT5G06130 | Symbols: | chaperone protein dnaJ-related | chr5:1853754-1855763 REVERSE protein|OR, putative, expressed",1.2108407,{"$nulls":8},34.99,"transport.misc","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927]
[null,29.7,"protein.glycosylation","Os02g0566800","Transcript","highly similar to ( 572) AT1G77810 | Symbols: | galactosyltransferase family protein | chr1:29260899-29263001 REVERSE Galactosyl_T protein|galactosyltransferase, putative, expressed",-1.0808505,{"$nulls":8},34.99,"transport.misc","Os02g0273800","Transcript","moderately similar to ( 417) AT2G32230 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13679608-13681756 REVERSE protein|PPR repeat domain containing protein, putative, expressed",2.1984947]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0580800","Transcript","weakly similar to ( 121) AT3G48070 | Symbols: | protein binding / zinc ion binding | chr3:17750878-17752297 FORWARD protein|protein binding protein, putative, expressed",0.9842709,{"$nulls":8},34.99,"transport.misc","Os12g0552300","Transcript","highly similar to ( 946) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEweakly similar to ( 128) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.8654522]
[null,"29.2.4","protein.synthesis.elongation","Os02g0595700","Transcript","highly similar to ( 647) AT4G20360 | Symbols: ATRAB8D, ATRABE1B | ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | chr4:10990036-10991466 FORWARDhighly similar to ( 650) EFTU2_SOYBN Elongation factor Tu, chloroplast precursor (EF-Tu) - Glycine max (Soybean) tufA PRK00049 PRK12735 PRK12736 TufB EF_Tu PRK12317 TEF1 GTP_EFTU SelB GTP_translation_factor EF1_alpha EFTU_III GTPBP1 PRK04000 EFTU_II GCD11 CysN GTP_EFTU_D3 PRK10512 SelB CysN_ATPS TypA eIF2_gamma SelB_euk PRK05506 cysN infB TetM_like FusA PRK07560 mtEFTU_III PRK10218 InfB EF2 TypA_BipA EF-G_bact PRK12740 LepA selB_II protein|elongation factor Tu, putative, expressed",2.9809444,{"$nulls":8},34.99,"transport.misc","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os02g0597700","Transcript","weakly similar to ( 145) AT5G14360 | Symbols: | ubiquitin family protein | chr5:4631038-4631641 FORWARDBAG1_N protein|ubiquitin family protein, putative, expressed",1.7427479,{"$nulls":8},34.99,"transport.misc","Os10g0190900","Transcript","moderately similar to ( 465) AT5G52450 | Symbols: | MATE efflux protein-related | chr5:21289042-21291749 REVERSE NorM PRK01766 PRK00187 MatE protein|MATE efflux family protein, putative, expressed",-1.6866058]
[null,29.4,"protein.postranslational modification","Os02g0617600","Transcript","weakly similar to ( 121) AT1G17720 | Symbols: ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | chr1:6093949-6098065 REVERSEweakly similar to ( 123) 2ABA_ORYSA Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (PP2A, subunit B, alpha isoform) - Oryza sativa (Rice) CDC55 protein|serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed",2.428065,{"$nulls":8},34.99,"transport.misc","Os03g0216700","Transcript","moderately similar to ( 374) AT1G51340 | Symbols: | MATE efflux family protein | chr1:19032034-19034681 FORWARD NorM protein|MATE efflux protein, putative, expressed",3.1010273]
[null,"29.1.6","protein.aa activation.lysine-tRNA ligase","Os02g0623500","Transcript","highly similar to ( 778) AT3G13490 | Symbols: OVA5, ATKRS-2 | OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | chr3:4395984-4399302 REVERSEmoderately similar to ( 335) SYK_ORYSA Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) lysS LysU LysRS_core lysS PRK12445 tRNA-synt_2 Asp_Lys_Asn_RS_core COG2269 aspC PRK09350 AsnS LysRS_N AsxRS_core aspS AspS asnC PRK12820 protein|tRNA synthetases class II domain containing protein, expressed",1.184189,{"$nulls":8},34.99,"transport.misc","Os03g0638200","Transcript","moderately similar to ( 279) AT3G13050 | Symbols: | transporter-related | chr3:4176866-4178868 FORWARD Sugar_tr protein|transporter family protein, putative, expressed",1.0119572]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0634900","Transcript","moderately similar to ( 411) AT1G16470 | Symbols: PAB1 | PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | chr1:5623122-5625439 FORWARDmoderately similar to ( 446) PSA2_ORYSA Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) proteasome_alpha_type_2 proteasome_alpha PRK03996 PRE1 proteasome_alpha_archeal proteasome_alpha_type_7 Proteasome proteasome_alpha_type_4 proteasome_protease_HslV proteasome_alpha_type_5 proteasome_alpha_type_3 proteasome_alpha_type_6 proteasome_alpha_type_1 Ntn_hydrolase proteasome_beta_archeal proteasome_beta protein|peptidase, T1 family, putative, expressed",-1.1412064,{"$nulls":8},34.99,"transport.misc","Os01g0929000","Transcript","highly similar to ( 671) AT3G19340 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:6701387-6704071 REVERSE protein|expressed protein",1.027943]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0639800","Transcript","very weakly similar to (90.5) AT4G27470 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr4:13735576-13736307 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",2.0388052,{"$nulls":8},34.99,"transport.misc","Os07g0613300","Transcript","highly similar to ( 824) AT1G72560 | Symbols: PSD | PSD (PAUSED); nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter/ tRNA binding | chr1:27325026-27329467 REVERSE Xpo1 protein|exportin 1, putative, expressed",-1.8188405]
[null,29.4,"protein.postranslational modification","Os02g0640500","Transcript","highly similar to ( 582) AT2G37710 | Symbols: RLK | RLK (receptor lectin kinase); kinase | chr2:15814934-15816961 REVERSEweakly similar to ( 196) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Lectin_legB Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_EphR PTKc_Jak_rpt2 SPS1 PTKc_EphR_A2 PTKc_Tec_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Src_like PTKc_EGFR_like PTKc_EphR_B PTKc_Csk_like PTKc_EphR_A PTKc_Syk_like PTKc_Trk PTKc_Abl PTKc_Itk PTKc_FAK PTKc_Btk_Bmx PTKc_Fes_like PTKc_Tec_Rlk PTKc_Ack_like PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_InsR_like PTKc_DDR PTKc_Chk PTKc_Aatyk PTKc_Ror PTKc_Csk PTKc_c-ros PTKc_Axl_like PTK_HER3 PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Fes PTK_CCK4 PTKc_Yes PTKc_Musk PTKc_Lyn PTKc_FGFR PTKc_Met_Ron PTKc_HER4 protein|lectin receptor-type protein kinase, putative, expressed",1.3651978,{"$nulls":8},34.99,"transport.misc","Os01g0701900","Transcript","highly similar to ( 536) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",1.1218387]
[null,29.5,"protein.degradation","Os02g0640700","Transcript","weakly similar to ( 115) AT1G14570 | Symbols: | UBX domain-containing protein | chr1:4983770-4987192 FORWARDUAS protein|expressed protein",4.648108,{"$nulls":8},34.99,"transport.misc","Os12g0163600","Transcript","moderately similar to ( 479) AT4G15720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:8949569-8951419 FORWARD protein|tetratricopeptide-like helical, putative, expressed",-1.0337161]
[null,"29.2.1.1.1.2.19","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19","Os02g0652600","Transcript","weakly similar to ( 138) AT4G17560 | Symbols: | ribosomal protein L19 family protein | chr4:9780343-9781752 FORWARDweakly similar to ( 142) RK19_SPIOL 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) rpl19 rplS RplS Ribosomal_L19 protein|50S ribosomal protein L19, chloroplast precursor, putative, expressed",3.607076,{"$nulls":8},34.99,"transport.misc","Os12g0479900","Transcript","highly similar to ( 713) AT3G19340 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:6701387-6704071 REVERSE protein|expressed protein",1.0086638]
[null,29.4,"protein.postranslational modification","Os02g0654300","Transcript","highly similar to ( 770) AT2G44830 | Symbols: | protein kinase, putative | chr2:18490398-18492779 FORWARDhighly similar to ( 607) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|AGC_PVPK_like_kin82y.6 - ACG kinases include homologs to PKA, PKG and PKC, expressed",2.1567822,{"$nulls":8},34.99,"transport.misc","Os07g0191500","Transcript","highly similar to ( 536) AT1G59720 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTION28); endonuclease | chr1:21939868-21941784 REVERSE protein|pentatricopeptide, putative, expressed",4.0154567]
[null,29.4,"protein.postranslational modification","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927,{"$nulls":8},34.99,"transport.misc","Os07g0642300","Transcript","moderately similar to ( 324) AT5G54750 | Symbols: | transport protein particle (TRAPP) component Bet3, putative | chr5:22242080-22243477 FORWARD TRAPP_Bet3 protein|transport protein particle component, Bet3, domain containing protein, expressed",-1.0046993]
[null,"29.5.5","protein.degradation.serine protease","Os02g0687900","Transcript","moderately similar to ( 288) AT5G09640 | Symbols: SNG2, SCPL19 | SCPL19; serine-type carboxypeptidase/ sinapoyltransferase | chr5:2988373-2990966 FORWARDmoderately similar to ( 224) CBP1_HORVU Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo Peptidase_S10 COG2939 protein|OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed",4.302679,{"$nulls":8},34.99,"transport.misc","Os10g0344500","Transcript","weakly similar to ( 196) AT1G73700 | Symbols: | MATE efflux family protein | chr1:27717554-27719630 REVERSE NorM PRK01766 MatE protein|MATE efflux family protein, putative, expressed",-2.7708168]
[null,"29.5.9","protein.degradation.AAA type","Os02g0706500","Transcript","highly similar to ( 610) AT2G18330 | Symbols: | AAA-type ATPase family protein | chr2:7965829-7968915 FORWARDvery weakly similar to (85.5) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) AAA COG1223 SpoVK RPT1 PRK03992 protein|AAA-type ATPase family protein, putative, expressed",-1.5348808,{"$nulls":8},34.99,"transport.misc","Os04g0488200","Transcript","moderately similar to ( 476) AT4G38010 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:17859582-17861261 REVERSEvery weakly similar to (91.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1440507]
[null,"29.5.4","protein.degradation.aspartate protease","Os02g0720900","Transcript","moderately similar to ( 249) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase nepenthesin-1 precursor, putative, expressed",1.9263893,{"$nulls":8},34.99,"transport.misc","Os05g0267100","Transcript","weakly similar to ( 124) AT1G22180 | Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr1:7828434-7829745 REVERSE protein|SEC14 cytosolic factor family protein, putative, expressed",4.299347]
[null,29.4,"protein.postranslational modification","Os02g0725000","Transcript","highly similar to ( 707) AT5G47750 | Symbols: D6PKL2, PK5 | D6PKL2 (D6 PROTEIN KINASE LIKE 2); kinase | chr5:19339947-19341864 REVERSEhighly similar to ( 816) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr SPS1 TyrKc PTKc protein|AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed",4.56811,{"$nulls":8},34.99,"transport.misc","Os05g0554000","Transcript","moderately similar to ( 370) AT1G71140 | Symbols: | MATE efflux family protein | chr1:26824762-26826748 FORWARD NorM PRK01766 MatE protein|MATE efflux family protein, putative, expressed",2.2158854]
[null,"29.2.4","protein.synthesis.elongation","Os02g0729500","Transcript","very weakly similar to (96.3) AT4G22780 | Symbols: ACR7 | ACR7; amino acid binding | chr4:11968696-11970956 REVERSEACT_ACR_2 protein|ACT domain-containing protein, putative, expressed",1.2128259,{"$nulls":8},34.99,"transport.misc","Os03g0582300","Transcript","moderately similar to ( 257) AT1G03550 | Symbols: | secretory carrier membrane protein (SCAMP) family protein | chr1:885851-887778 REVERSE SCAMP protein|secretory carrier-associated membrane protein, putative, expressed",-2.1764817]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0732200","Transcript","highly similar to ( 523) AT1G23030 | Symbols: | armadillo/beta-catenin repeat family protein / U-box domain-containing protein | chr1:8156745-8158842 FORWARDmoderately similar to ( 402) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) Ubox U-box protein|spotted leaf 11, putative, expressed",2.6973565,{"$nulls":8},34.99,"transport.misc","Os09g0381100","Transcript","highly similar to ( 817) AT5G62890 | Symbols: | permease, putative | chr5:25243723-25246748 FORWARD Xan_ur_permease UraA PRK10720 protein|nucleobase-ascorbate transporter, putative, expressed",1.0136734]
[null,"29.5.9","protein.degradation.AAA type","Os02g0740300","Transcript","highly similar to ( 528) AT4G04180 | Symbols: | AAA-type ATPase family protein | chr4:2020471-2023673 FORWARDweakly similar to ( 120) PRS6B_SOLTU 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) SpoVK AAA RPT1 PRK03992 COG1223 HflB hflB protein|AAA-type ATPase family protein, putative, expressed",-1.6577975,{"$nulls":8},34.99,"transport.misc","Os02g0821600","Transcript","moderately similar to ( 318) AT4G00350 | Symbols: | MATE efflux family protein | chr4:151978-153988 FORWARD NorM MatE protein|MATE efflux family protein, putative, expressed",1.3273071]
[null,29.6,"protein.folding","Os02g0751600","Transcript","weakly similar to ( 187) AT4G39710 | Symbols: | immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative | chr4:18427249-18428325 REVERSE FkpA FKBP_C protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",2.2500784,{"$nulls":8},34.99,"transport.misc","Os07g0172600","Transcript","highly similar to ( 677) AT5G03800 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE protein|pentatricopeptide, putative, expressed",1.0694861]
[null,"29.2.1.1.1.2.29","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L29","Os02g0754300","Transcript","weakly similar to ( 109) AT5G65220 | Symbols: | ribosomal protein L29 family protein | chr5:26061301-26062506 FORWARDweakly similar to ( 136) RK29_MAIZE 50S ribosomal protein L29, chloroplast precursor (CL29) - Zea mays (Maize) protein|ribosomal protein L29, putative, expressed",1.8062941,{"$nulls":8},34.99,"transport.misc","Os07g0636900","Transcript","moderately similar to ( 467) AT2G29760 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12712884-12715100 FORWARDvery weakly similar to (99.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.0778502]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0759400","Transcript","weakly similar to ( 134) AT2G35000 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:14751809-14752945 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",-1.3101403,{"$nulls":8},34.99,"transport.misc","Os03g0570800","Transcript","highly similar to ( 538) AT3G21690 | Symbols: | MATE efflux family protein | chr3:7638750-7641861 FORWARD NorM PRK01766 MatE PRK00187 protein|MATE efflux family protein, putative, expressed",-1.6251078]
[null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os02g0760600","Transcript","very weakly similar to (88.2) AT5G19000 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding | chr5:6342563-6344641 FORWARD protein|BTB/POZ domain containing protein, putative, expressed",2.5056999,{"$nulls":8},34.99,"transport.misc","Os11g0482400","Transcript","moderately similar to ( 483) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSEvery weakly similar to (98.6) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide repeat protein PPR986-12, putative, expressed",3.0890915]
[null,29.4,"protein.postranslational modification","Os02g0769900","Transcript","moderately similar to ( 437) AT1G05750 | Symbols: PDE247, CLB19 | PDE247 (pigment defective 247) | chr1:1721523-1723025 FORWARDvery weakly similar to (99.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.1371251,{"$nulls":8},34.99,"transport.misc","Os02g0735800","Transcript","moderately similar to ( 264) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSE protein|pentatricopeptide, putative, expressed",3.5191174]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0770600","Transcript","moderately similar to ( 234) AT1G68140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 157 Blast hits to 148 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr1:25539410-25540414 REVERSEDUF1644 protein|expressed protein",0.99462175,{"$nulls":8},34.99,"transport.misc","Os01g0857500","Transcript","highly similar to ( 580) AT2G27810 | Symbols: | xanthine/uracil permease family protein | chr2:11852338-11855411 FORWARD Xan_ur_permease UraA protein|nucleobase-ascorbate transporter, putative, expressed",4.437719]
[null,29.6,"protein.folding","Os02g0781400","Transcript","moderately similar to ( 288) AT5G20720 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | CPN20 (CHAPERONIN 20); calmodulin binding | chr5:7015015-7016354 FORWARDmoderately similar to ( 271) CH10C_SPIOL 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) groES cpn10 GroS Cpn10 protein|chaperonin, putative, expressed",8.439939,{"$nulls":8},34.99,"transport.misc","Os04g0499100","Transcript","moderately similar to ( 423) AT5G25050 | Symbols: | integral membrane transporter family protein | chr5:8632022-8633828 FORWARDBT1 protein|integral membrane transporter family protein, putative, expressed",1.4935709]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os02g0784700","Transcript","highly similar to ( 723) AT1G53750 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSEhighly similar to ( 750) PRS7_ORYSA 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) RPT1 PRK03992 SpoVK HflB hflB AAA COG1223 protein|26S protease regulatory subunit 7, putative, expressed",-1.4037241,{"$nulls":8},34.99,"transport.misc","Os06g0104000","Transcript","highly similar to ( 602) AT2G46915 | Symbols: | unknown protein | chr2:19274018-19277707 REVERSE protein|expressed protein",1.0599656]
[null,29.7,"protein.glycosylation","Os02g0785200","Transcript","moderately similar to ( 238) AT5G57500 | Symbols: | transferase, transferring glycosyl groups | chr5:23286406-23287525 REVERSE protein|hypro1, putative, expressed",1.707531,{"$nulls":8},34.99,"transport.misc","Os07g0425000","Transcript","moderately similar to ( 365) AT1G04570 | Symbols: | integral membrane transporter family protein | chr1:1246859-1248600 REVERSEBT1 protein|integral membrane transporter family protein, putative, expressed",1.3912657]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os02g0790600","Transcript","moderately similar to ( 201) AT2G18650 | Symbols: MEE16 | MEE16 (maternal effect embryo arrest 16); protein binding / zinc ion binding | chr2:8086860-8088131 REVERSE protein|RING-H2 finger protein, putative, expressed",1.1699792,{"$nulls":8},34.99,"transport.misc","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,"29.2.3","protein.synthesis.initiation","Os02g0794400","Transcript","weakly similar to ( 177) AT2G24060 | Symbols: | translation initiation factor 3 (IF-3) family protein | chr2:10229453-10231390 FORWARDinfC InfC IF3_C protein|translation initiation factor IF-3, putative, expressed",1.6035123,{"$nulls":8},34.99,"transport.misc","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os02g0808100","Transcript","moderately similar to ( 459) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 203) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Csk_like PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_Syk_like PTKc_Met_Ron PTKc_EGFR_like PTKc_Srm_Brk PTKc_Ror PTKc_Fer PTKc_Tyk2_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Axl_like PTKc_Frk_like PTKc_Abl PTKc_TrkB PTKc_Fes PTKc_TrkA PTKc_InsR_like PTKc_Btk_Bmx PTKc_EphR PTKc_TrkC PTKc_Itk PTKc_EphR_A2 PTKc_Chk PTKc_Tec_like PTKc_FAK PTKc_Lck_Blk PTKc_Tyro3 PTK_CCK4 PTKc_Ror1 PTKc_Zap-70 PTKc_RET PTKc_Musk PTKc_c-ros PTKc_Tec_Rlk PTKc_HER4 PTKc_Ack_like PTKc_EphR_A PTKc_EphR_B PTKc_Yes PTKc_Fyn_Yrk PTKc_Src PTKc_Ror2 PTKc_IGF-1R PTKc_Csk protein|OsWAK22 - OsWAK receptor-like protein kinase, expressed",1.4700646,{"$nulls":8},34.99,"transport.misc","Os01g0708600","Transcript","moderately similar to ( 362) AT5G58030 | Symbols: | transport protein particle (TRAPP) component Bet3 family protein | chr5:23487021-23488483 REVERSE COG5128 TRAPP_Bet3 protein|transport protein particle component, Bet3, domain containing protein, expressed",-1.1999387]
[null,"29.5.5","protein.degradation.serine protease","Os02g0815700","Transcript","moderately similar to ( 374) AT4G17740 | Symbols: | C-terminal processing protease, putative | chr4:9867088-9869719 REVERSEPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP2 - Putative C-terminal processing peptidase homologue, expressed",1.8624986,{"$nulls":8},34.99,"transport.misc","Os08g0497300","Transcript","moderately similar to ( 463) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",1.7594906]
[null,"29.2.1.1.1.2.9","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9","Os02g0822600","Transcript","weakly similar to ( 191) AT3G44890 | Symbols: RPL9 | RPL9 (RIBOSOMAL PROTEIN L9); structural constituent of ribosome | chr3:16386505-16387963 FORWARDmoderately similar to ( 248) RK9_WHEAT 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) rplI RplI Ribosomal_L9_C protein|ribosomal L9, putative, expressed",1.7699264,{"$nulls":8},34.99,"transport.misc","Os03g0188100","Transcript","highly similar to ( 578) AT5G65380 | Symbols: | ripening-responsive protein, putative | chr5:26123241-26126352 REVERSE NorM PRK01766 protein|MATE efflux family protein, putative, expressed",-2.8997297]
[null,"29.3.2","protein.targeting.mitochondria","Os03g0114900","Transcript","weakly similar to ( 166) AT1G17530 | Symbols: ATTIM23-1 | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr1:6027723-6028286 FORWARD Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.1456639,{"$nulls":8},34.99,"transport.misc","Os08g0440100","Transcript","moderately similar to ( 256) AT5G58070 | Symbols: ATTIL, TIL | TIL (TEMPERATURE-INDUCED LIPOCALIN); binding / transporter | chr5:23500512-23501156 REVERSE Lipocalin_2 Blc PRK10477 protein|OsTIL-2 Temperature-induced lipocalin-2, expressed",1.5349528]
[null,29.4,"protein.postranslational modification","Os03g0118400","Transcript","moderately similar to ( 473) AT3G48750 | Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | CDC2 (CELL DIVISION CONTROL 2); cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase | chr3:18072238-18074296 FORWARDhighly similar to ( 549) CDC21_ORYSA Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Ack_like PTKc_Abl PTKc_Fes PTKc_Tyk2_rpt2 PTKc_Src_like PTKc_Ror PTKc_Jak2_Jak3_rpt2 protein|cyclin-dependent kinase A-1, putative, expressed",1.0222226,{"$nulls":8},34.99,"transport.misc","Os09g0481100","Transcript","moderately similar to ( 454) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",2.1477907]
[null,"29.2.4","protein.synthesis.elongation","Os03g0121700","Transcript","weakly similar to ( 134) AT3G49470 | Symbols: NACA2 | NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | chr3:18341072-18342273 FORWARD protein|nascent polypeptide-associated complex subunit alpha, putative, expressed",3.0898573,{"$nulls":8},34.99,"transport.misc","Os12g0106600","Transcript","moderately similar to ( 362) AT2G38330 | Symbols: | MATE efflux family protein | chr2:16064571-16067318 FORWARD NorM PRK10189 protein|MATE efflux protein, putative, expressed",2.0669186]
[null,"29.2.1.1.1.2.11","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11","Os03g0122200","Transcript","moderately similar to ( 219) AT1G32990 | Symbols: PRPL11 | PRPL11 (PLASTID RIBOSOMAL PROTEIN L11); structural constituent of ribosome | chr1:11955827-11957139 FORWARDmoderately similar to ( 214) RK11_SPIOL 50S ribosomal protein L11, chloroplast precursor (CL11) - Spinacia oleracea (Spinach) rplK RplK rpl11 RL11 Ribosomal_L11 rpl11p Ribosomal_L11 protein|L11 domain containing ribosomal protein, putative, expressed",2.5056727,{"$nulls":8},34.99,"transport.misc","Os09g0555100","Transcript","moderately similar to ( 456) AT5G65980 | Symbols: | auxin efflux carrier family protein | chr5:26392444-26394232 FORWARD Mem_trans protein|auxin efflux carrier component, putative, expressed",4.1791673]
[null,"29.2.1.1.1.2.5","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5","Os03g0125000","Transcript","moderately similar to ( 283) AT4G01310 | Symbols: | ribosomal protein L5 family protein | chr4:544166-545480 REVERSEmoderately similar to ( 455) RK5_ORYSA 50S ribosomal protein L5, chloroplast precursor - Oryza sativa (Rice) rplE rpl5 RplE rpl5p Ribosomal_L5_C protein|ribosomal protein L5, putative, expressed",2.6563103,{"$nulls":8},34.99,"transport.misc","Os03g0823800","Transcript","highly similar to ( 666) AT1G60030 | Symbols: ATNAT7, NAT7 | xanthine/uracil permease family protein | chr1:22113993-22116648 REVERSE Xan_ur_permease UraA PRK10720 protein|nucleobase-ascorbate transporter, putative, expressed",1.9040369]
[null,29.4,"protein.postranslational modification","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,{"$nulls":8},34.99,"transport.misc","Os03g0582200","Transcript","moderately similar to ( 312) AT1G61250 | Symbols: SC3 | SC3 (SECRETORY CARRIER 3); transmembrane transporter | chr1:22586035-22588664 FORWARD SCAMP protein|secretory carrier-associated membrane protein 4, putative, expressed",-1.4735543]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396,{"$nulls":8},34.99,"transport.misc","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0130900","Transcript","moderately similar to ( 427) AT1G20650 | Symbols: | ATP binding / protein kinase/ protein serine/threonine kinase | chr1:7158422-7160022 REVERSEmoderately similar to ( 224) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) PTKc Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Ror PTKc_EGFR_like PTKc_InsR_like PTKc_Trk PTKc_Chk PTKc_Frk_like PTKc_TrkA PTKc_EphR PTKc_Fes_like PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Ack_like PTKc_Abl PTKc_c-ros PTKc_Axl_like SPS1 PTKc_DDR PTKc_Csk PTKc_Itk PTKc_RET PTKc_Fyn_Yrk PTKc_TrkB PTKc_DDR_like PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Syk_like PTKc_Musk PTK_CCK4 PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Yes PTKc_Lyn PTKc_Ror1 PTKc_Met_Ron PTKc_EphR_A2 PTK_HER3 PTKc_ALK_LTK PTKc_DDR2 PTKc_Src PTKc_Aatyk PTKc_Jak1_rpt2 PTKc_DDR1 PTKc_IGF-1R PTKc_FGFR PTKc_Axl PTKc_Fer PTKc_Hck PTKc_InsR PTKc_EphR_B PTK_Ryk PTKc_Ror2 PTKc_HER2 PTKc_FAK PTKc_PDGFR PTKc_EphR_A PTKc_Fes PTKc_Tie1 PTKc_Tyro3 protein|protein kinase, putative, expressed",2.371442,{"$nulls":8},34.99,"transport.misc","Os07g0180700","Transcript","moderately similar to ( 216) AT3G43790 | Symbols: ZIFL2 | ZIFL2 (ZINC INDUCED FACILITATOR-like 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | chr3:15655443-15658848 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",-1.4535028]
[null,"29.3.3","protein.targeting.chloroplast","Os03g0131900","Transcript","moderately similar to ( 280) AT2G47450 | Symbols: CAO, CPSRP43 | CAO (CHAOS); chromatin binding | chr2:19472781-19473902 FORWARDhighly similar to ( 614) SR43C_ORYSA Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice)ANK protein|signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed",4.6295643]
[null,"29.2.1.2.2.23","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23","Os03g0139100","Transcript","weakly similar to ( 182) AT3G04400 | Symbols: emb2171 | emb2171 (embryo defective 2171); structural constituent of ribosome | chr3:1167339-1168308 FORWARDweakly similar to ( 183) RL23_TOBAC 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) rpl14p RplN protein|ribosomal protein, putative, expressed",-1.0164894]
[null,29.6,"protein.folding","Os03g0143400","Transcript","highly similar to ( 853) AT3G23990 | Symbols: HSP60, HSP60-3B | HSP60 (HEAT SHOCK PROTEIN 60); ATP binding | chr3:8669013-8672278 FORWARDhighly similar to ( 905) CH61_MAIZE Chaperonin CPN60-1, mitochondrial precursor (HSP60-1) - Zea mays (Maize) GroEL groEL groEL groEL groEL groEL groEL GroL chaperonin_type_I_II Cpn60_TCP1 chaperonin_like cpn60 TCP1_beta TCP1_zeta protein|T-complex protein, putative, expressed",-1.779047]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0149700","Transcript","very weakly similar to (87.8) AT5G43420 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:17451790-17452917 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",2.9515336]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0170400","Transcript","highly similar to ( 562) AT2G02800 | Symbols: APK2B | APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr2:796889-799250 REVERSEmoderately similar to ( 232) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc Pkinase S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Syk_like PTKc_Jak2_Jak3_rpt2 PTKc_Srm_Brk PTKc_Fes_like PTKc_EphR PTKc_Ror PTKc_Src_like PTKc_Trk PTKc_InsR_like PTKc_Abl PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_Tec_like PTKc_TrkC SPS1 PTKc_DDR PTKc_Frk_like PTKc_Chk PTKc_EphR_A2 PTKc_Csk PTKc_RET PTKc_Axl_like PTKc_c-ros PTKc_Btk_Bmx PTKc_TrkA PTKc_TrkB PTKc_Itk PTKc_Musk PTKc_Fer PTK_HER3 PTKc_DDR1 PTKc_EphR_B PTKc_Lck_Blk PTKc_ALK_LTK PTKc_FGFR PTKc_Tec_Rlk PTK_CCK4 PTKc_FAK PTKc_Ror1 PTKc_Met_Ron PTKc_Lyn PTKc_Tie2 PTKc_Tie1 PTKc_PDGFR PTKc_Tyro3 PTKc_DDR2 PTKc_DDR_like PTKc_Src PTKc_Tie PTKc_EphR_A PTKc_Yes PTKc_Fyn_Yrk PTKc_EphR_A10 PTKc_Hck PTKc_Syk PTKc_HER2 PTKc_HER4 PTKc_Fes PTKc_EGFR protein|protein kinase domain containing protein, expressed",0.98200226]
[null,"29.3.1","protein.targeting.nucleus","Os03g0172000","Transcript","nearly identical (1029) AT1G80680 | Symbols: SAR3, MOS3, PRE, NUP96 | SAR3 (SUPPRESSOR OF AUXIN RESISTANCE 3); porin | chr1:30324219-30328489 FORWARDNucleoporin2 protein|OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed",-1.3587781]
[null,"29.2.3","protein.synthesis.initiation","Os03g0182700","Transcript","moderately similar to ( 319) AT4G33250 | Symbols: EIF3K, TIF3K1, ATTIF3K1 | EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K); translation initiation factor | chr4:16039066-16040617 REVERSEmoderately similar to ( 434) IF3C_ORYSA Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) SAC3_GANP protein|eukaryotic translation initiation factor 3 subunit K, putative, expressed",-0.9565379]
[null,"29.3.2","protein.targeting.mitochondria","Os03g0194500","Transcript","weakly similar to ( 179) AT5G55510 | Symbols: | P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr5:22486525-22487916 REVERSE Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.2311996]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os03g0213100","Transcript","highly similar to ( 855) AT2G34250 | Symbols: | protein transport protein sec61, putative | chr2:14462635-14464572 FORWARD PRK08568 SecY SecY protein|protein transport protein Sec61 subunit alpha, putative, expressed",-1.5263834]
[null,"29.3.1","protein.targeting.nucleus","Os03g0214200","Transcript","weakly similar to ( 139) AT1G13740 | Symbols: AFP2 | AFP2 (ABI FIVE BINDING PROTEIN 2) | chr1:4713969-4715158 FORWARDDUF1675 protein|protein of unknown function DUF1675 domain containing protein, expressed",1.0746373]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os03g0214600","Transcript","highly similar to ( 567) AT4G19006 | Symbols: | 26S proteasome regulatory subunit, putative (RPN9) | chr4:10409349-10411347 REVERSE protein|proteasome subunit, putative, expressed",-0.9739596]
[null,"29.2.1.1.1.2.15","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15","Os03g0219900","Transcript","moderately similar to ( 239) AT3G25920 | Symbols: RPL15 | RPL15; structural constituent of ribosome | chr3:9491268-9492558 REVERSEmoderately similar to ( 246) RK15_PEA 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) rplO Ribosomal_L15 RplO protein|50S ribosomal protein L15, chloroplast precursor, putative, expressed",1.8858652]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0232600","Transcript","moderately similar to ( 419) AT5G65920 | Symbols: | U-box domain-containing protein | chr5:26364323-26365657 REVERSEvery weakly similar to (80.5) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox protein|U-box domain containing protein, expressed",1.5340596]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os03g0234200","Transcript","moderately similar to ( 231) AT3G52590 | Symbols: UBQ1, EMB2167, ERD16, HAP4 | UBQ1 (UBIQUITIN EXTENSION PROTEIN 1); protein binding / structural constituent of ribosome | chr3:19505668-19506681 FORWARDweakly similar to ( 143) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin UBQ Nedd8 ubiquitin UBL Ribosomal_L40e protein|ubiquitin fusion protein, putative, expressed",-0.94750816]
[null,29.6,"protein.folding","Os03g0244000","Transcript","weakly similar to ( 127) AT1G75690 | Symbols: | chaperone protein dnaJ-related | chr1:28422273-28423170 REVERSE protein|expressed protein",4.763195]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0251700","Transcript","moderately similar to ( 395) AT2G45590 | Symbols: | protein kinase family protein | chr2:18786725-18788776 FORWARDvery weakly similar to (95.1) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) PTKc Pkinase_Tyr S_TKc Pkinase S_TKc TyrKc protein|protein kinase, putative, expressed",1.2490149]
[null,"29.3.1","protein.targeting.nucleus","Os03g0261900","Transcript","moderately similar to ( 416) AT4G27640 | Symbols: | importin beta-2 subunit family protein | chr4:13798013-13802976 REVERSE protein|HEAT repeat family protein, putative, expressed",-0.986502]
[null,29.4,"protein.postranslational modification","Os03g0262200","Transcript","moderately similar to ( 360) AT4G08500 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MEKK1 (MAP KINASE KINASE KINASE 1); DNA binding / MAP kinase kinase kinase/ kinase/ kinase binding / protein binding | chr4:5404272-5407062 REVERSEweakly similar to ( 123) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_FAK PTKc_Ack_like PTKc_Src_like PTKc_InsR_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_c-ros PTKc_Fes_like PTKc_Syk_like PTKc_Tec_like PTKc_Fer PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Trk PTKc_PDGFR PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Src PTKc_Abl PTKc_Axl_like PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTK_CCK4 PTKc_Yes PTKc_Jak1_rpt2 PTKc_Axl PTKc_Hck PTKc_Tec_Rlk PTKc_Itk PTKc_Tyro3 PTKc_Csk PTKc_Musk PTKc_EphR PTKc_Syk PTKc_Chk PTKc_FGFR PTKc_Fes PTKc_Btk_Bmx PTKc_DDR PTKc_RET PTKc_Tie PTKc_FGFR2 PTKc_Tie1 PTKc_FGFR4 PTKc_TrkB PTKc_FGFR3 PTKc_Tie2 PTKc_IGF-1R PTKc_InsR PTKc_FGFR1 PTKc_EGFR PTK_HER3 PTKc_TrkC PTKc_TrkA PTK_Ryk PTKc_HER4 PTKc_Zap-70 PTKc_VEGFR PTKc_Met_Ron PTKc_VEGFR2 PTKc_PDGFR_alpha PTKc_Ror PTKc_VEGFR3 protein|STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-1.1983789]
[null,"29.2.1.1.1.2.4","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4","Os03g0265400","Transcript","moderately similar to ( 271) AT1G07320 | Symbols: RPL4 | RPL4; poly(U) binding / structural constituent of ribosome | chr1:2249190-2250173 FORWARDmoderately similar to ( 268) RK4_TOBAC 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) rplD Ribosomal_L4 rpl4 RplD protein|ribosomal protein L4, putative, expressed",2.1165917]
[null,"29.5.3","protein.degradation.cysteine protease","Os03g0266000","Transcript","moderately similar to ( 222) AT2G38025 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); BEST Arabidopsis thaliana protein match is: OTU-like cysteine protease family protein (TAIR:AT3G57810.3); Has 100 Blast hits to 100 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr2:15915239-15916692 REVERSE protein|OTU-like cysteine protease family protein, putative, expressed",1.0999006]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0281500","Transcript","highly similar to ( 748) AT3G46290 | Symbols: | protein kinase, putative | chr3:17013009-17015501 FORWARDmoderately similar to ( 264) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Src_like PTK_CCK4 PTKc_Met_Ron PTKc_Itk PTKc_EphR PTKc_Tec_like PTKc_FGFR PTKc_Csk PTKc_Frk_like PTKc_Ror PTKc_Fer PTKc_TrkA PTKc_InsR_like PTKc_TrkB PTKc_Syk_like PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_FGFR1 PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Tie1 PTKc_FGFR4 PTKc_FGFR2 PTKc_TrkC PTKc_Chk PTKc_Fyn_Yrk PTKc_RET PTKc_Src PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Lyn PTKc_EGFR_like PTKc_FGFR3 PTKc_Axl_like PTKc_Lck_Blk PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_Abl PTKc_Tec_Rlk PTKc_Fes PTKc_FAK PTKc_Yes PTKc_Tie PTKc_IGF-1R PTKc_EphR_B PTKc_InsR PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Hck PTK_Ryk PTK_HER3 PTKc_EphR_A PTKc_Ror1 protein|TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed",-1.0393327]
[null,"29.2.1.1.1.2.10","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10","Os03g0284400","Transcript","moderately similar to ( 258) AT5G13510 | Symbols: | ribosomal protein L10 family protein | chr5:4341294-4341956 FORWARDmoderately similar to ( 265) RK10_TOBAC 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco)rplJ RplJ protein|ribosomal protein L10, putative, expressed",2.17638]
[null,"29.3.2","protein.targeting.mitochondria","Os03g0296300","Transcript","weakly similar to ( 167) AT3G10110 | Symbols: MEE67 | MEE67 (maternal effect embryo arrest 67); P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr3:3116225-3117378 FORWARD Tim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",-1.096938]
[null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os03g0297700","Transcript","moderately similar to ( 234) AT1G62350 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT3G46870.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:23056653-23057935 FORWARD protein|PPR repeat domain containing protein, putative, expressed",-1.0641394]
[null,29.4,"protein.postranslational modification","Os03g0314400","Transcript","moderately similar to ( 349) AT2G13600 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:5671493-5673586 FORWARDvery weakly similar to (95.5) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|tetratricopeptide-like helical, putative, expressed",-1.3869253]
[null,29.8,"protein.assembly and cofactor ligation","Os03g0314700","Transcript","weakly similar to ( 139) AT4G01940 | Symbols: NFU1, AtCNFU1 | NFU1; structural molecule | chr4:842265-843388 REVERSEvery weakly similar to (80.1) NIFU1_ORYSA NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) COG0694 protein|nifU, putative, expressed",-1.1953921]
[null,"29.2.1.1.3.1.1","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1","Os03g0315800","Transcript","moderately similar to ( 492) AT5G30510 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome | chr5:11619262-11621223 REVERSEhighly similar to ( 511) RR1_SPIOL 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach)PRK07400 RpsA rpsA PRK00087 rpsA rpsA S1 protein|S1 RNA binding domain containing protein, expressed",2.555285]
[null,"29.2.1.1.1.2.6","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6","Os03g0356300","Transcript","moderately similar to ( 300) AT1G05190 | Symbols: emb2394 | emb2394 (embryo defective 2394); structural constituent of ribosome | chr1:1502515-1503738 REVERSEvery weakly similar to (92.8) RM06_PROWI Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii rplF rpl6 RplF protein|ribosomal protein L6, putative, expressed",2.9967391]
[null,29.6,"protein.folding","Os03g0366000","Transcript","weakly similar to ( 131) AT1G14980 | Symbols: CPN10 | CPN10 (CHAPERONIN 10); chaperone binding | chr1:5165930-5166654 REVERSEweakly similar to ( 130) CH10_BRANA 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) cpn10 GroS groES Cpn10 protein|chaperonin, putative, expressed",-1.4425694]
[null,29.5,"protein.degradation","Os03g0389100","Transcript","moderately similar to ( 249) AT4G25110 | Symbols: AtMC2 | AtMC2 (metacaspase 2); cysteine-type endopeptidase | chr4:12887738-12889953 REVERSE Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",1.4400749]
[null,"29.2.1.1.1.1.5","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5","Os03g0452300","Transcript","moderately similar to ( 209) AT2G33800 | Symbols: | ribosomal protein S5 family protein | chr2:14300925-14302352 REVERSEmoderately similar to ( 209) RR5_SPIOL 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach)rpsE rps5 RpsE Ribosomal_S5_C protein|ribosomal protein, putative, expressed",1.8105879]
[null,29.4,"protein.postranslational modification","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os03g0637800","Transcript","nearly identical (1082) AT3G59420 | Symbols: ACR4 | ACR4 (ARABIDOPSIS CRINKLY4); kinase/ transmembrane receptor protein kinase | chr3:21959871-21962558 REVERSEnearly identical (1561) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc PTKc Pkinase S_TKc Pkinase_Tyr TyrKc PTKc_Jak_rpt2 PTKc_Csk_like SPS1 PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_Srm_Brk PTKc_Frk_like PTK_CCK4 PTKc_EGFR_like PTKc_Syk_like PTKc_Musk PTKc_Ror PTKc_Itk PTKc_TrkB PTKc_Abl PTKc_Tec_like PTKc_InsR_like PTKc_FGFR PTKc_Csk PTKc_EphR PTKc_Chk PTKc_TrkC PTKc_TrkA PTKc_Met_Ron PTK_HER3 PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Tec_Rlk PTKc_Zap-70 PTKc_Axl PTKc_PDGFR PTKc_Axl_like PTKc_HER4 PTKc_Fes PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_IGF-1R PTKc_FAK PTKc_FGFR1 PTKc_Lyn PTKc_Tie PTK_Ryk PTKc_InsR PTKc_Lck_Blk PTKc_FGFR2 PTKc_RET PTKc_FGFR3 PTKc_FGFR4 PTKc_Src PTKc_Jak1_rpt2 PTKc_EGFR PTKc_Btk_Bmx PTKc_Ror1 PTKc_EphR_A2 PTKc_Tyro3 PTKc_Ack_like PTKc_DDR2 PTKc_HER2 protein|TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed",3.504902]
[null,29.4,"protein.postranslational modification","Os03g0638000","Transcript","moderately similar to ( 264) AT3G22790 | Symbols: | kinase interacting family protein | chr3:8052446-8057888 REVERSE KIP1 Smc protein|KIP1, putative, expressed",1.4630132]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os03g0651100","Transcript","moderately similar to ( 394) AT3G58460 | Symbols: ATRBL15 | ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15) | chr3:21623374-21626348 REVERSE Rhomboid protein|OsRhmbd9 - Putative Rhomboid homologue, expressed",-1.0198601]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0657100","Transcript","highly similar to ( 689) AT1G20780 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1 (SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1); ubiquitin-protein ligase | chr1:7217812-7220609 FORWARDvery weakly similar to (80.1) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox protein|armadillo/beta-catenin repeat family protein, putative, expressed",-1.0264767]
[null,"29.2.1.1.1.1.13","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13","Os03g0704000","Transcript","weakly similar to ( 178) AT5G14320 | Symbols: | 30S ribosomal protein S13, chloroplast (CS13) | chr5:4618189-4618772 REVERSEvery weakly similar to ( 100) RT13_SOYBN Small ribosomal subunit protein S13, mitochondrial precursor - Glycine max (Soybean) rpsM RpsM Ribosomal_S13 rps13 rps13p protein|ribosomal protein S13p/S18e, putative, expressed",1.9734036]
[null,29.6,"protein.folding","Os03g0708500","Transcript","moderately similar to ( 251) AT1G18170 | Symbols: | immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr1:6254291-6255507 FORWARD protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",2.4796293]
[null,"29.5.7","protein.degradation.metalloprotease","Os03g0729000","Transcript","highly similar to ( 718) AT1G17870 | Symbols: ATEGY3, EGY3 | EGY3 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3) | chr1:6150036-6152185 REVERSE protein|peptidase, M50 family, putative, expressed",-1.8073081]
[null,"29.5.5","protein.degradation.serine protease","Os03g0730500","Transcript","moderately similar to ( 298) AT1G33540 | Symbols: scpl18 | scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | chr1:12162349-12164700 REVERSEmoderately similar to ( 225) CBP1_ORYSA Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) Peptidase_S10 COG2939 protein|OsSCP20 - Putative Serine Carboxypeptidase homologue, expressed",3.3840637]
[null,"29.2.1.99.99","protein.synthesis.ribosomal protein.unknown.unknown","Os03g0739700","Transcript","weakly similar to ( 121) AT4G19390 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553 proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). | chr4:10574903-10576355 REVERSEUPF0114 protein|uncharacterized UPF0114 domain containing protein, expressed",-2.0760953]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os03g0741700","Transcript","moderately similar to ( 239) AT2G30580 | Symbols: DRIP2 | DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr2:13026444-13030363 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-0.99910975]
[null,"29.2.1.1.1.2.6","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6","Os03g0751400","Transcript","moderately similar to ( 308) AT1G05190 | Symbols: emb2394 | emb2394 (embryo defective 2394); structural constituent of ribosome | chr1:1502515-1503738 REVERSEvery weakly similar to (93.2) RM06_PROWI Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii rplF rpl6 RplF protein|ribosomal protein L6, putative, expressed",2.9028213]
[null,29.4,"protein.postranslational modification","Os03g0755000","Transcript","highly similar to ( 713) AT1G69220 | Symbols: SIK1 | SIK1; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr1:26020298-26026119 REVERSEweakly similar to ( 152) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc SPS1 PTKc PTKc_Jak_rpt2 KIND PTKc_Fes_like PTKc_FAK PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like PTK_CCK4 PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_InsR_like PTKc_Src_like PTKc_Tec_Rlk PTKc_Srm_Brk PTKc_Itk PTKc_FGFR PTKc_Btk_Bmx PTKc_Ror PTKc_Abl PTKc_Jak1_rpt2 PTKc_RET PTKc_EphR PTKc_Syk PTKc_Trk PTKc_Zap-70 PTKc_Musk PTKc_Csk_like PTKc_ALK_LTK PTKc_Ack_like PTKc_Ror1 PTKc_Fer PTKc_Frk_like PTKc_Fes PTKc_DDR PTKc_c-ros PTK_HER3 PTKc_PDGFR PTKc_TrkB PTKc_Lck_Blk PTKc_EphR_B PTKc_FGFR2 PTKc_Tie2 PTKc_Csk PTKc_Src PTKc_TrkA PTKc_EphR_A2 PTKc_Tie protein|STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-0.9904855]
[null,"29.2.3","protein.synthesis.initiation","Os03g0758800","Transcript","moderately similar to ( 264) AT1G69410 | Symbols: ATELF5A-3, ELF5A-3 | ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3); translation initiation factor | chr1:26089301-26090194 FORWARDmoderately similar to ( 287) IF5A2_NICPL Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) Efp eIF-5a protein|eukaryotic translation initiation factor 5A, putative, expressed",-1.1058044]
[null,"29.2.1.1.1.1.9","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9","Os03g0769100","Transcript","moderately similar to ( 207) AT1G74970 | Symbols: RPS9, TWN3 | RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome | chr1:28157761-28159202 REVERSEweakly similar to ( 195) RR9_SPIOL 30S ribosomal protein S9, chloroplast precursor (Fragment) - Spinacia oleracea (Spinach) rps9 rpsI RpsI Ribosomal_S9 protein|ribosomal protein, putative, expressed",2.3437655]
[null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os03g0792500","Transcript","moderately similar to ( 483) AT3G03740 | Symbols: ATBPM4 | ATBPM4 (BTB-POZ and MATH domain 4); protein binding | chr3:937106-939807 REVERSE MATH BTB protein|MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed",-1.0055532]
[null,"29.2.4","protein.synthesis.elongation","Os03g0806400","Transcript","moderately similar to ( 242) AT4G26310 | Symbols: | elongation factor P (EF-P) family protein | chr4:13314006-13316066 REVERSEPRK00529 Efp PRK04542 protein|elongation factor P, putative, expressed",-1.0552033]
[null,29.5,"protein.degradation","Os03g0807100","Transcript","highly similar to ( 612) AT1G55360 | Symbols: | unknown protein | chr1:20666526-20668502 REVERSEDUF239 protein|carboxyl-terminal peptidase, putative, expressed",3.0451024]
[null,29.4,"protein.postranslational modification","Os03g0808600","Transcript","highly similar to ( 691) AT5G12480 | Symbols: CPK7 | CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:4047817-4050035 REVERSEmoderately similar to ( 478) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc FRQ1 protein|CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-0.9945205]
[null,"29.2.1.1.1.2.17","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17","Os03g0815400","Transcript","moderately similar to ( 235) AT3G54210 | Symbols: | ribosomal protein L17 family protein | chr3:20067672-20068385 REVERSEmoderately similar to ( 224) RK17_TOBAC 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) rplQ RplQ Ribosomal_L17 protein|50S ribosomal protein L17, putative, expressed",2.0880232]
[null,"29.2.1.1.1.2.18","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18","Os03g0828100","Transcript","weakly similar to ( 174) AT1G48350 | Symbols: | ribosomal protein L18 family protein | chr1:17867269-17868215 FORWARDmoderately similar to ( 233) RK18_ORYSA 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice)rplR rpl18 RplR Ribosomal_L18p protein|ribosomal L18p/L5e family protein, putative, expressed",3.0872662]
[null,29.4,"protein.postranslational modification","Os03g0841800","Transcript","highly similar to ( 718) AT1G09840 | Symbols: ATSK41 | ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase | chr1:3196114-3199524 REVERSEhighly similar to ( 660) MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 (EC 2.7.11.1) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like protein|CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed",1.6212746]
[null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os03g0842700","Transcript","moderately similar to ( 214) AT3G19770 | Symbols: ATVPS9A, VPS9A | VPS9A; Rho guanyl-nucleotide exchange factor | chr3:6867742-6869114 FORWARD VPS9 VPS9 protein|vacuolar sorting protein, putative, expressed",1.1670836]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os03g0851300","Transcript","highly similar to ( 671) AT5G09900 | Symbols: EMB2107, RPN5A, MSA | EMB2107 (EMBRYO DEFECTIVE 2107) | chr5:3089406-3092434 REVERSE RPN5 protein|proteasome subunit, putative, expressed",-1.0287567]
[null,"29.3.3","protein.targeting.chloroplast","Os04g0117900","Transcript","moderately similar to ( 384) AT1G08980 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | chr1:2884455-2886430 FORWARD PRK08310 GatA Amidase PRK07056 PRK09201 PRK07488 gatA PRK08186 PRK05962 PRK06102 PRK06169 PRK06170 PRK12470 PRK07869 PRK07235 PRK07139 PRK07487 PRK08137 PRK07486 PRK06061 PRK07042 PRK06707 protein|amidase family protein, putative, expressed",-1.5737028]
[null,"29.3.3","protein.targeting.chloroplast","Os04g0118100","Transcript","moderately similar to ( 406) AT1G08980 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | chr1:2884455-2886430 FORWARD PRK08310 GatA Amidase gatA PRK09201 PRK07056 PRK07488 PRK08186 PRK06102 PRK05962 PRK07139 PRK06169 PRK06170 PRK12470 PRK08137 PRK07235 PRK07869 PRK07486 PRK07487 PRK06061 PRK07042 PRK06707 protein|amidase family protein, putative, expressed",1.3241987]
[null,"29.5.1","protein.degradation.subtilases","Os04g0121100","Transcript","highly similar to ( 590) AT4G10540 | Symbols: | subtilase family protein | chr4:6512515-6515743 REVERSE protein|OsSub34 - Putative Subtilisin homologue, expressed",3.5140316]
[null,"29.2.4","protein.synthesis.elongation","Os04g0270100","Transcript","highly similar to ( 694) AT1G18070 | Symbols: | EF-1-alpha-related GTP-binding protein, putative | chr1:6214236-6218211 REVERSEmoderately similar to ( 278) EF1A_MAIZE Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) TEF1 PRK12317 EF1_alpha CysN PRK05506 CysN_ATPS GTP_EFTU cysN eRF3c_III tufA TufB PRK12736 PRK12735 PRK00049 eRF3_II eRF3_II_like GTPBP1 SelB GTP_translation_factor EF_Tu PRK04000 SelB GCD11 HBS1_C protein|elongation factor Tu, putative, expressed",-0.9735505]
[null,29.4,"protein.postranslational modification","Os04g0271200","Transcript","moderately similar to ( 307) AT5G10480 | Symbols: PAS2, PEP | PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase | chr5:3298047-3299980 REVERSE PTPLA Ptpl protein|expressed protein",-1.3546611]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0286300","Transcript","moderately similar to ( 377) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDweakly similar to ( 191) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Ack_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Srm_Brk PTKc_Met_Ron PTKc_Tec_like PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_Fer PTKc_Frk_like PTKc_EphR PTKc_Syk_like PTKc_Itk PTKc_Fes PTKc_Tec_Rlk PTKc_InsR_like PTKc_EGFR_like PTKc_Lck_Blk PTKc_Abl PTKc_Btk_Bmx PTKc_c-ros PTKc_Src PTKc_Ror PTKc_DDR PTKc_FAK PTKc_ALK_LTK PTKc_Chk PTKc_Axl_like PTKc_Fyn_Yrk PTKc_Lyn PTKc_TrkA PTK_CCK4 PTKc_EphR_A2 PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Yes PTKc_DDR_like PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_Musk PTKc_PDGFR protein|OsWAK33 - OsWAK receptor-like protein OsWAK-RLP, expressed",-2.0525486]
[null,29.4,"protein.postranslational modification","Os04g0288500","Transcript","moderately similar to ( 275) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 153) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase S_TKc Lectin_legB Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Ror PTKc_Srm_Brk PTKc_EphR_B PTKc_Trk PTKc_Syk_like PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_EphR_A2 PTKc_Abl PTKc_Src_like PTKc_Fes_like PTKc_EphR_A PTKc_Tec_like PTKc_InsR_like PTKc_Frk_like PTKc_Itk PTKc_TrkA PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Fes PTKc_Fer PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Ror2 PTKc_TrkC PTKc_Zap-70 PTKc_DDR PTK_Jak2_Jak3_rpt1 PTKc_FAK protein|protein kinase, putative, expressed",-2.1872857]
[null,29.4,"protein.postranslational modification","Os04g0304200","Transcript","highly similar to ( 981) AT3G45780 | Symbols: PHOT1, NPH1, JK224, RPT1 | PHOT1 (PHOTOTROPIN 1); FMN binding / blue light photoreceptor/ kinase/ protein binding / protein serine/threonine kinase | chr3:16818557-16823960 FORWARDmoderately similar to ( 355) KPK1_PHAVU Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed",1.779159]
[null,"29.5.3","protein.degradation.cysteine protease","Os04g0311400","Transcript","moderately similar to ( 494) AT4G39090 | Symbols: RD19, RD19A | RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase | chr4:18215826-18217326 REVERSEhighly similar to ( 575) CYSP1_MAIZE Cysteine proteinase 1 precursor (EC 3.4.22.-) - Zea mays (Maize) Peptidase_C1A Peptidase_C1 Pept_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinB Peptidase_C1 Peptidase_C1A_CathepsinX COG4870 protein|cysteine proteinase 1 precursor, putative, expressed",1.1169826]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0365100","Transcript","moderately similar to ( 457) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 189) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc SPS1 PTKc_Met_Ron PTKc_Itk PTKc_Trk PTKc_Jak_rpt2 PTKc_EGFR_like PTKc_Syk_like PTKc_Tec_like PTKc_Srm_Brk PTKc_DDR PTKc_Src_like PTKc_Fes_like PTKc_Btk_Bmx PTKc_InsR_like PTKc_Fer PTKc_Ack_like PTKc_Frk_like PTKc_FAK PTKc_TrkA PTK_CCK4 PTKc_Tec_Rlk PTK_HER3 PTKc_EphR PTKc_c-ros PTKc_DDR_like PTKc_EphR_A2 PTKc_Abl PTKc_TrkC PTKc_Axl_like PTKc_TrkB PTKc_Ror PTKc_HER4 PTKc_ALK_LTK PTKc_Csk_like PTKc_Lck_Blk PTKc_PDGFR PTKc_Src PTKc_Fes PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Lyn PTKc_Chk PTKc_IGF-1R PTK_Ryk PTKc_Syk PTKc_Jak2_Jak3_rpt2 PTKc_Tyk2_rpt2 PTKc_Zap-70 PTKc_DDR1 PTKc_InsR PTKc_RET PTKc_EphR_B PTKc_DDR2 PTKc_Yes PTKc_Ror1 protein|OsWAK37 - OsWAK short gene, expressed",-1.7192389]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0370900","Transcript","moderately similar to ( 391) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 163) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase SPS1 PTKc_Csk_like PTKc_Fes_like PTKc_Trk PTKc_RET PTKc_Ror PTKc_Fer PTKc_EphR PTKc_Jak_rpt2 PTKc_TrkA PTKc_Src_like PTKc_Frk_like PTKc_Chk PTKc_InsR_like PTKc_Fes PTKc_Itk PTKc_EGFR_like PTKc_Abl PTKc_Srm_Brk PTKc_FAK PTKc_EphR_A2 PTKc_Tie1 PTKc_ALK_LTK PTKc_Tec_like PTKc_Tie PTKc_Ack_like PTKc_Csk PTKc_FGFR PTKc_Axl_like PTKc_Btk_Bmx PTKc_IGF-1R PTKc_Tec_Rlk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_Met_Ron PTKc_Musk PTKc_EphR_B PTKc_Yes PTKc_Ror1 protein|OsWAK60 - OsWAK receptor-like protein kinase, expressed",-2.1680458]
[null,"29.2.1.2.1.10","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S10","Os04g0430100","Transcript","weakly similar to ( 164) AT5G52650 | Symbols: | 40S ribosomal protein S10 (RPS10C) | chr5:21355781-21357003 REVERSEweakly similar to ( 194) RS10_ORYSA 40S ribosomal protein S10 - Oryza sativa (Rice) S10_plectin COG5045 protein|40S ribosomal protein S10, putative, expressed",-1.0569]
[null,29.6,"protein.folding","Os04g0431100","Transcript","weakly similar to ( 176) AT5G17710 | Symbols: EMB1241 | EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization | chr5:5839560-5841639 REVERSE GrpE GrpE GrpE protein|co-chaperone GrpE protein, putative, expressed",1.3976799]
[null,"29.5.5","protein.degradation.serine protease","Os04g0459900","Transcript","highly similar to ( 566) AT5G39830 | Symbols: DEGP8, DEG8 | DEG8; peptidase/ serine-type peptidase | chr5:15942883-15945676 FORWARD DegQ PRK10942 PRK10139 PRK10898 protein|OsDegp5 - Putative Deg protease homologue, expressed",2.7586281]
[null,"29.2.1.1.1.1.83","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.PSRP3","Os04g0461100","Transcript","weakly similar to ( 144) AT1G68590 | Symbols: | plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative | chr1:25757593-25758169 REVERSEweakly similar to ( 195) RRP3_HORVU Plastid-specific 30S ribosomal protein 3, chloroplast precursor (PSRP-3) - Hordeum vulgare (Barley)PRK02724 PSRP-3_Ycf65 protein|plastid-specific 30S ribosomal protein 3, chloroplast precursor, putative, expressed",2.3429642]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os04g0485000","Transcript","highly similar to ( 616) AT4G24820 | Symbols: | 26S proteasome regulatory subunit, putative (RPN7) | chr4:12790471-12792599 REVERSEhighly similar to ( 749) PSMD6_ORYSA 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) RPN7 protein|26S proteasome non-ATPase regulatory subunit 6, putative, expressed",-1.0655257]
[null,29.4,"protein.postranslational modification","Os04g0488000","Transcript","highly similar to ( 644) AT1G67580 | Symbols: | protein kinase family protein | chr1:25327727-25330965 REVERSEmoderately similar to ( 283) CDC21_ORYSA Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Jak1_rpt2 PTKc_Itk PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Syk_like PTKc_EphR_A PTKc_Tec_like PTKc_EphR_B PTKc_EphR_A2 PTKc_DDR PTKc_Srm_Brk protein|cyclin-dependent kinase G-2, putative, expressed",1.1843933]
[null,29.4,"protein.postranslational modification","Os04g0488200","Transcript","moderately similar to ( 476) AT4G38010 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:17859582-17861261 REVERSEvery weakly similar to (91.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1440507]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0490500","Transcript","moderately similar to ( 263) AT3G59350 | Symbols: | serine/threonine protein kinase, putative | chr3:21932930-21934883 FORWARDweakly similar to ( 146) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc S_TKc Pkinase S_TKc protein|STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed",-1.5664234]
[null,"29.2.1.2.2.523","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A","Os04g0501000","Transcript","weakly similar to ( 144) AT3G55280 | Symbols: RPL23AB | RPL23AB (RIBOSOMAL PROTEIN L23AB); RNA binding / nucleotide binding / structural constituent of ribosome | chr3:20500667-20501519 FORWARDweakly similar to ( 153) RL23A_TOBAC 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) protein|60S ribosomal protein L23A, putative, expressed",-1.032732]
[null,"29.2.1.2.1.11","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11","Os04g0502300","Transcript","moderately similar to ( 264) AT3G48930 | Symbols: EMB1080 | EMB1080 (embryo defective 1080); structural constituent of ribosome | chr3:18141017-18142189 REVERSEmoderately similar to ( 261) RS11_SOYBN 40S ribosomal protein S11 - Glycine max (Soybean) rps17p Ribosomal_S17 RpsQ protein|ribosomal protein S17, putative, expressed",-1.1222967]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os04g0508800","Transcript","highly similar to ( 576) AT2G38970 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:16274135-16276651 FORWARDvWA_C3HC4_type vWA_subgroup vWA_interalpha_trypsin_inhibitor VWA vWFA VWA protein|zinc finger family protein, putative, expressed",-1.137682]
[null,29.4,"protein.postranslational modification","Os04g0514800","Transcript","highly similar to ( 535) AT4G14340 | Symbols: CKI1, CKL11 | CKI1 (CASEIN KINASE I); kinase/ protein serine/threonine kinase | chr4:8248532-8251668 REVERSE S_TKc Pkinase SPS1 S_TKc protein|CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed",1.7678499]
[null,"29.5.4","protein.degradation.aspartate protease","Os04g0535200","Transcript","moderately similar to ( 306) AT4G16563 | Symbols: | aspartyl protease family protein | chr4:9329933-9331432 REVERSE protein|aspartyl protease family protein, putative, expressed",5.323376]
[null,29.5,"protein.degradation","Os04g0537900","Transcript","highly similar to ( 625) AT1G62710 | Symbols: BETA-VPE, BETAVPE | BETA-VPE (BETA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase | chr1:23224070-23226857 REVERSEhighly similar to ( 628) VPE_RICCO Vacuolar-processing enzyme precursor (EC 3.4.22.-) (VPE) - Ricinus communis (Castor bean) Peptidase_C13 GPI8 protein|vacuolar-processing enzyme precursor, putative, expressed",0.9706742]
[null,"29.5.1","protein.degradation.subtilases","Os04g0543700","Transcript","highly similar to ( 586) AT2G19170 | Symbols: SLP3 | SLP3; serine-type peptidase | chr2:8314154-8317620 REVERSEPeptidase_S8 protein|OsSub42 - Putative Subtilisin homologue, expressed",-1.4760503]
[null,"29.5.11","protein.degradation.ubiquitin","Os04g0577000","Transcript","moderately similar to ( 300) AT2G21270 | Symbols: | ubiquitin fusion degradation UFD1 family protein | chr2:9107841-9110012 FORWARD UFD1 UFD1 protein|ubiquitin fusion degradation protein, putative, expressed",-1.5380398]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os04g0580400","Transcript","moderately similar to ( 230) AT3G57870 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | chr3:21428831-21430110 REVERSEweakly similar to ( 117) UBC2_WHEAT Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",2.8872042]
[null,"29.3.2","protein.targeting.mitochondria","Os04g0581300","Transcript","protein|mitochondrial import inner membrane translocase subunit Tim, putative, expressed",-1.0124408]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os04g0586700","Transcript","very weakly similar to (87.0) AT3G60220 | Symbols: ATL4 | ATL4; protein binding / zinc ion binding | chr3:22254790-22255794 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",1.9383358]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0598900","Transcript","moderately similar to ( 471) AT1G21240 | Symbols: WAK3 | WAK3 (wall associated kinase 3); kinase/ protein serine/threonine kinase | chr1:7434303-7436702 FORWARDweakly similar to ( 200) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc TyrKc S_TKc Pkinase Pkinase_Tyr PTKc PTKc_Met_Ron PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Csk_like PTKc_Frk_like PTKc_Srm_Brk PTKc_Abl PTKc_Trk PTKc_EGFR_like PTKc_Axl_like PTKc_EphR PTKc_Fer PTKc_Fes_like PTKc_EphR_A2 PTKc_Axl PTKc_Itk PTKc_Syk_like PTKc_EphR_B PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Fyn_Yrk PTKc_Lyn PTKc_FAK PTKc_Tec_like PTKc_TrkA PTKc_EphR_A PTK_CCK4 PTKc_Yes PTKc_Tec_Rlk PTKc_Ack_like PTKc_Musk PTKc_Tyro3 PTKc_Btk_Bmx PTKc_Lck_Blk PTKc_RET PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Fes PTKc_Hck PTKc_Ror PTKc_c-ros PTKc_TrkB PTKc_Tie2 PTKc_Csk PTKc_HER4 PTKc_Tyk2_rpt2 PTKc_DDR_like PTK_HER3 PTKc_PDGFR PTKc_IGF-1R PTKc_DDR2 PTKc_EGFR PTKc_TrkC PTKc_FGFR PTKc_Tie1 protein|OsWAK50 - OsWAK receptor-like protein kinase, expressed",-1.7638403]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0599000","Transcript","moderately similar to ( 490) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 208) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk SPS1 PTKc_Tec_like PTKc_Fes_like PTKc_Src_like PTKc_EGFR_like PTKc_Frk_like PTKc_EphR PTKc_Srm_Brk PTKc_Fer PTKc_InsR_like PTKc_Axl_like PTKc_Trk PTKc_DDR PTKc_Tec_Rlk PTKc_Syk_like PTKc_Abl PTKc_Ack_like PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Src PTK_CCK4 PTKc_c-ros PTKc_EphR_A2 PTKc_Lck_Blk PTKc_Fes PTKc_EphR_B PTKc_Tie1 PTKc_IGF-1R PTKc_ALK_LTK PTKc_TrkA PTKc_Axl PTKc_Chk PTKc_PDGFR PTKc_Ror PTKc_RET PTKc_Lyn PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Tie PTKc_Csk PTKc_FGFR PTKc_TrkB PTKc_Musk PTK_HER3 PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_HER4 PTKc_DDR_like PTKc_InsR PTKc_Tyro3 PTKc_TrkC PTKc_Yes PTK_Ryk PTKc_Aatyk PTKc_Ror1 PTKc_Zap-70 PTKc_HER2 PTKc_EGFR PTKc_DDR1 PTKc_Hck PTKc_Syk PTKc_FGFR1 protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed",-1.2069334]
[null,"29.2.6","protein.synthesis.ribosomal RNA","Os04g0620700","Transcript","weakly similar to ( 138) AT1G48920 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid binding / nucleotide binding | chr1:18098186-18101422 FORWARD protein|nucleolin, putative, expressed",-1.1026945]
[null,"29.2.1.99.1.4","protein.synthesis.ribosomal protein.unknown.small subunit.S4","Os04g0662100","Transcript","weakly similar to ( 137) AT5G15750 | Symbols: | RNA-binding S4 domain-containing protein | chr5:5141449-5142701 FORWARD protein|S4 domain containing protein, putative, expressed",-1.0731497]
[null,"29.5.3","protein.degradation.cysteine protease","Os04g0670200","Transcript","highly similar to ( 529) AT5G43060 | Symbols: | cysteine proteinase, putative / thiol protease, putative | chr5:17269784-17272117 REVERSEhighly similar to ( 855) ORYB_ORYSA Oryzain beta chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) Peptidase_C1 Peptidase_C1A Pept_C1 Peptidase_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinB Peptidase_C1A_CathepsinX protein|oryzain beta chain precursor, putative, expressed",1.2948819]
[null,29.5,"protein.degradation","Os04g0682500","Transcript","moderately similar to ( 322) AT4G00590 | Symbols: | asparaginase 2 family protein | chr4:252835-254880 FORWARD Taspase1_like COG1446 Asparaginase_2 Glycosylasparaginase ASRGL1_like Ntn_Asparaginase_2_like Asparaginase_2 PRK10226 protein|L-asparaginase precursor protein, putative, expressed",0.96303064]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os04g0684800","Transcript","moderately similar to ( 252) AT2G36060 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzyme family protein | chr2:15143012-15143998 REVERSE COG5078 UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-1.6265568]
[null,"29.2.6","protein.synthesis.ribosomal RNA","Os04g0685100","Transcript","moderately similar to ( 282) AT2G37990 | Symbols: | ribosome biogenesis regulatory protein (RRS1) family protein | chr2:15900713-15903028 FORWARD RRS1 protein|ribosome biogenesis regulatory protein, putative, expressed",-1.0797013]
[null,"29.5.4","protein.degradation.aspartate protease","Os04g0685200","Transcript","moderately similar to ( 246) AT3G52500 | Symbols: | aspartyl protease family protein | chr3:19465644-19467053 REVERSE Asp protein|Eukaryotic aspartyl protease domain containing protein, expressed",2.512636]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os04g0685900","Transcript","highly similar to ( 766) AT1G66150 | Symbols: TMK1 | TMK1 (TRANSMEMBRANE KINASE 1); transmembrane receptor protein serine/threonine kinase | chr1:24631503-24634415 FORWARDmoderately similar to ( 245) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Csk_like PTKc_Tec_like PTKc_EphR PTKc_Fyn_Yrk PTKc_Fes_like PTKc_Itk PTKc_Srm_Brk PTKc_Frk_like PTKc_Src PTKc_Axl_like PTKc_Yes SPS1 PTKc_TrkA PTKc_Ror PTKc_Csk PTKc_InsR_like PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_DDR PTKc_Abl PTKc_Met_Ron PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_A2 PTKc_Btk_Bmx PTKc_Fer PTKc_DDR_like PTKc_Lyn PTK_CCK4 PTKc_ALK_LTK PTKc_Musk PTKc_Tyro3 PTKc_Syk_like PTKc_Tie2 PTKc_FGFR PTKc_Ror1 PTKc_Jak1_rpt2 PTKc_DDR2 PTKc_Axl PTKc_DDR1 PTKc_IGF-1R PTKc_Fes PTKc_c-ros PTKc_Hck PTKc_EGFR_like PTKc_EphR_A PTKc_EphR_B PTKc_InsR PTKc_FGFR4 PTKc_Tie1 PTKc_RET PTKc_Aatyk PTKc_FGFR3 PTK_Ryk PTKc_FGFR1 PTKc_FGFR2 PTKc_PDGFR PTKc_Tie PTKc_EphR_A10 PTK_HER3 protein|receptor protein kinase TMK1 precursor, putative, expressed",2.0713534]
[null,"29.3.1","protein.targeting.nucleus","Os04g0691600","Transcript","nearly identical (1209) AT2G16950 | Symbols: TRN1, ATTRN1 | TRN1 (TRANSPORTIN 1); protein transporter | chr2:7353939-7360637 FORWARD KAP95 protein|transportin-2, putative, expressed",3.0316124]
[null,"29.2.1.1.1.2.28","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L28","Os05g0101400","Transcript","weakly similar to ( 137) AT2G33450 | Symbols: | 50S ribosomal protein L28, chloroplast (CL28) | chr2:14173620-14174380 FORWARDweakly similar to ( 130) RK28_TOBAC 50S ribosomal protein L28, chloroplast precursor (CL28) - Nicotiana tabacum (Common tobacco)rpmB protein|ribosomal protein L28 protein, putative, expressed",1.7980641]
[null,29.5,"protein.degradation","Os05g0110300","Transcript","moderately similar to ( 419) AT2G37660 | Symbols: | binding / catalytic/ coenzyme binding | chr2:15795481-15796977 REVERSE protein|NAD dependent epimerase/dehydratase family protein, putative, expressed",1.4069256]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0110900","Transcript","highly similar to ( 509) AT1G07570 | Symbols: APK1A, APK1 | APK1A; kinase/ protein serine/threonine kinase | chr1:2331369-2333210 REVERSEmoderately similar to ( 229) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc Pkinase S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Tyk2_rpt2 PTKc_InsR_like PTKc_EphR PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Ror PTKc_DDR PTKc_Syk_like PTKc_DDR1 PTKc_Fes_like PTKc_Srm_Brk PTKc_Musk PTKc_Axl_like PTKc_c-ros PTKc_Ack_like PTKc_DDR_like PTKc_Src_like PTKc_EphR_A SPS1 PTKc_Itk PTK_HER3 PTKc_Jak2_Jak3_rpt2 PTKc_DDR2 PTKc_EphR_B PTKc_EphR_A2 PTKc_TrkC PTKc_RET PTKc_FGFR PTKc_TrkA PTKc_Fer PTKc_TrkB PTKc_Tec_like PTKc_ALK_LTK PTKc_Met_Ron PTKc_Chk PTKc_Abl PTK_CCK4 PTKc_Lck_Blk PTKc_Csk PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Syk PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Tie2 PTKc_Frk_like PTKc_Tec_Rlk PTKc_FAK PTKc_Tie1 PTKc_Hck PTKc_Ror1 PTKc_Axl PTKc_Fes PTKc_HER4 PTKc_Zap-70 PTKc_InsR PTKc_HER2 PTKc_Lyn PTKc_EphR_A10 PTKc_EGFR PTKc_Tie PTKc_Tyro3 protein|protein kinase APK1A, chloroplast precursor, putative, expressed",-1.02154]
[null,"29.3.2","protein.targeting.mitochondria","Os05g0111200","Transcript","weakly similar to ( 171) AT2G28900 | Symbols: OEP16, ATOEP16-L, ATOEP16-1 | ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1); P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | chr2:12414423-12415459 REVERSETim17 protein|mitochondrial import inner membrane translocase subunit Tim17, putative, expressed",2.6894696]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0127300","Transcript","moderately similar to ( 495) AT3G55950 | Symbols: CCR3, ATCRR3 | CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase | chr3:20753903-20756347 REVERSEmoderately similar to ( 249) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) PTKc Pkinase S_TKc Pkinase_Tyr TyrKc S_TKc SPS1 PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like PTKc_Src_like PTKc_Trk PTKc_Itk PTKc_Ror PTKc_Fes_like PTKc_Btk_Bmx PTKc_EphR PTK_CCK4 PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Frk_like PTKc_EphR_A2 PTKc_InsR_like PTKc_Syk_like PTKc_Axl_like PTKc_TrkA PTKc_Tec_Rlk PTKc_Met_Ron PTKc_Chk PTKc_Lck_Blk PTKc_RET PTKc_Tie2 PTKc_Ack_like PTKc_Csk PTKc_EGFR_like PTKc_TrkC PTKc_Src PTKc_EphR_B PTKc_TrkB PTKc_Abl PTKc_EphR_A PTKc_FGFR PTKc_DDR PTKc_c-ros protein|TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed",-1.4382596]
[null,29.4,"protein.postranslational modification","Os05g0134000","Transcript","highly similar to ( 582) AT5G26751 | Symbols: ATSK11, SK 11 | ATSK11; protein kinase/ protein serine/threonine kinase | chr5:9399582-9401839 REVERSEhighly similar to ( 595) MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1) - Medicago sativa (Alfalfa) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_Syk_like PTKc_Tyk2_rpt2 protein|CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed",-1.1218661]
[null,"29.2.1.1.2.1.27","protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S27","Os05g0148300","Transcript","weakly similar to ( 101) AT5G44710 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 56 Blast hits to 56 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 30; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr5:18041621-18042322 FORWARD Mit_rib_S27 protein|expressed protein",-1.0530885]
[null,29.4,"protein.postranslational modification","Os05g0168800","Transcript","very weakly similar to (94.0) AT5G58320 | Symbols: | kinase interacting protein-related | chr5:23578094-23579531 FORWARD protein|KIP1, putative, expressed",3.1746738]
[null,"29.5.5","protein.degradation.serine protease","Os05g0268500","Transcript","moderately similar to ( 222) AT2G35770 | Symbols: scpl28 | scpl28 (serine carboxypeptidase-like 28); serine-type carboxypeptidase | chr2:15034179-15036497 REVERSEmoderately similar to ( 251) CBP2_WHEAT Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca Peptidase_S10 COG2939 protein|OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed",-0.97590154]
[null,29.7,"protein.glycosylation","Os05g0301500","Transcript","highly similar to ( 741) AT1G76400 | Symbols: | ribophorin I family protein | chr1:28658713-28661672 REVERSE Ribophorin_I protein|dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed",-1.0711902]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0319700","Transcript","moderately similar to ( 416) AT2G25220 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr2:10742918-10745540 REVERSEmoderately similar to ( 202) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_c-ros PTKc_Src_like PTKc_Tec_like PTKc_Fes_like PTKc_EphR SPS1 PTKc_Trk PTKc_FGFR PTKc_DDR PTKc_Ror PTKc_Chk PTKc_Tec_Rlk PTKc_Tie2 PTKc_EGFR_like PTKc_InsR_like PTKc_Musk PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_ALK_LTK PTKc_Itk PTKc_Syk_like PTKc_FGFR4 PTKc_Fes PTKc_Btk_Bmx PTKc_Lck_Blk PTKc_Csk PTKc_Tie1 PTKc_EphR_A2 PTK_CCK4 PTKc_FGFR3 PTKc_Jak1_rpt2 PTKc_Fer PTKc_FAK PTKc_Tie PTKc_Ror1 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_PDGFR PTKc_Tyro3 PTKc_Lyn PTKc_FGFR2 PTKc_Ack_like PTKc_EphR_B PTKc_Src PTKc_Hck PTKc_FGFR1 PTKc_DDR_like PTKc_TrkC PTKc_Met_Ron PTKc_Axl_like PTKc_DDR1 PTKc_IGF-1R PTKc_Yes PTKc_Syk PTKc_EphR_A PTKc_RET PTKc_DDR2 PTK_HER3 PTKc_EGFR PTKc_TrkB PTKc_TrkA PTKc_HER4 PTKc_HER2 PTK_Ryk PTKc_InsR PTKc_Zap-70 PTKc_Aatyk protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",2.3925202]
[null,29.4,"protein.postranslational modification","Os05g0332300","Transcript","highly similar to ( 575) AT5G58380 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SIP1 (SOS3-INTERACTING PROTEIN 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:23597092-23598531 REVERSEmoderately similar to ( 439) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Srm_Brk PTKc_Fer PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Ror PTKc_Fes PTKc_Src_like PTKc_Frk_like PTKc_Abl PTKc_Tec_like PTKc_Chk PTKc_Tec_Rlk PTKc_EGFR_like PTKc_FAK PTKc_Ack_like PTKc_Btk_Bmx PTKc_PDGFR PTKc_EphR PTKc_Itk PTKc_InsR_like PTKc_EphR_A PTKc_Lck_Blk PTKc_Csk protein|CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.441363]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0353500","Transcript","moderately similar to ( 334) AT4G18640 | Symbols: MRH1 | MRH1 (morphogenesis of root hair 1); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:10260481-10263577 FORWARDweakly similar to ( 107) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) PTKc Pkinase_Tyr TyrKc protein|MRH1, putative, expressed",3.9484806]
[null,"29.2.5","protein.synthesis.release","Os05g0375600","Transcript","moderately similar to ( 305) AT3G57190 | Symbols: | peptide chain release factor, putative | chr3:21166468-21168198 FORWARD prfB PRK05589 PRK06746 PRK07245 PrfB PRK07342 PRK08787 PrfA prfA protein|peptide chain release factor 2, putative, expressed",3.9005356]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os05g0383100","Transcript","highly similar to ( 633) AT1G56590 | Symbols: | clathrin adaptor complexes medium subunit family protein | chr1:21202250-21204697 REVERSE Adap_comp_sub protein|adaptor complexes medium subunit family domain containing protein, expressed",-0.95944196]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0389600","Transcript","moderately similar to ( 256) AT5G45290 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:18350011-18352092 REVERSE protein|zinc finger, C3HC4 type domain containing protein, expressed",1.657834]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0439000","Transcript","very weakly similar to (80.1) AT3G18773 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:6466304-6466966 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-1.8216048]
[null,29.4,"protein.postranslational modification","Os05g0440800","Transcript","highly similar to ( 607) AT3G44200 | Symbols: ATNEK6, NEK6, IBO1 | NEK6 (\"NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6\"); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:15906788-15911365 FORWARDweakly similar to ( 127) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Jak_rpt2 PTKc_Tec_like PTKc_FAK PTKc_Ack_like PTKc_Srm_Brk PTKc_InsR_like PTKc_Itk PTKc_Src_like PTKc_Lck_Blk PTKc_EphR_B PTKc_EphR PTKc_Src PTKc_Tyk2_rpt2 PTKc_FGFR PTKc_Syk_like PTKc_Tec_Rlk PTKc_EphR_A protein|protein kinase, putative, expressed",1.8811064]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0452800","Transcript","weakly similar to ( 167) AT5G05830 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:1755910-1756825 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",1.3361411]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os05g0460200","Transcript","moderately similar to ( 244) AT3G46460 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase | chr3:17096120-17097315 REVERSEmoderately similar to ( 240) UBC7_WHEAT Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-0.9605363]
[null,29.4,"protein.postranslational modification","Os05g0460800","Transcript","weakly similar to ( 194) AT5G59770 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: PAS2 (PASTICCINO 2); enoyl-CoA hydratase/ protein tyrosine phosphatase (TAIR:AT5G10480.2); Has 525 Blast hits to 525 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 286; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr5:24079521-24081195 REVERSE PTPLA protein|expressed protein",1.4790215]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os05g0461000","Transcript","moderately similar to ( 206) AT1G60970 | Symbols: | clathrin adaptor complex small chain family protein | chr1:22448008-22449387 REVERSE RET3 protein|clathrin adaptor complex small chain domain containing protein, expressed",-0.9751541]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0471000","Transcript","moderately similar to ( 390) AT5G45840 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:18594080-18597221 REVERSEvery weakly similar to (99.0) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc protein|expressed protein",-1.1398734]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0476700","Transcript","moderately similar to ( 378) AT5G01830 | Symbols: | armadillo/beta-catenin repeat family protein / U-box domain-containing protein | chr5:320983-323007 FORWARDweakly similar to ( 161) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)Ubox U-box protein|spotted leaf 11, putative, expressed",-1.4166422]
[null,29.4,"protein.postranslational modification","Os05g0480000","Transcript","highly similar to ( 560) AT5G01920 | Symbols: STN8 | STN8; kinase/ protein kinase | chr5:359154-360867 FORWARDmoderately similar to ( 248) STT7_CHLRE Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii S_TKc Pkinase S_TKc SPS1 protein|serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed",1.9188571]
[null,"29.2.1.2.2.30","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30","Os05g0490100","Transcript","weakly similar to ( 159) AT1G77940 | Symbols: | 60S ribosomal protein L30 (RPL30B) | chr1:29304116-29305288 REVERSEweakly similar to ( 185) RL30_MAIZE 60S ribosomal protein L30 - Zea mays (Maize) RPL30 Ribosomal_L7Ae PRK01018 protein|ribosomal protein L7Ae, putative, expressed",-0.9632222]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os05g0490800","Transcript","moderately similar to ( 434) AT2G27020 | Symbols: PAG1 | PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase | chr2:11528515-11530858 REVERSEmoderately similar to ( 453) PSA3_ORYSA Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) - Oryza sativa (Rice) proteasome_alpha_type_3 proteasome_alpha PRE1 PRK03996 proteasome_alpha_archeal Proteasome proteasome_alpha_type_1 proteasome_alpha_type_5 proteasome_alpha_type_2 proteasome_protease_HslV proteasome_alpha_type_6 proteasome_alpha_type_4 proteasome_alpha_type_7 Ntn_hydrolase proteasome_beta_archeal proteasome_beta protein|peptidase, T1 family, putative, expressed",-1.3196164]
[null,29.5,"protein.degradation","Os05g0496400","Transcript","moderately similar to ( 312) AT1G79340 | Symbols: AtMC4 | AtMC4 (metacaspase 4); cysteine-type peptidase | chr1:29842849-29844368 FORWARD Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",-1.4738307]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0497600","Transcript","moderately similar to ( 242) AT5G44280 | Symbols: ATRING1A, RING1A | RING1A (RING 1A); protein binding / zinc ion binding | chr5:17836115-17839114 REVERSE protein|zinc finger C3HC4 type family protein, putative, expressed",2.5479977]
[null,"29.2.2","protein.synthesis.misc ribosomal protein","Os05g0497675","Transcript","moderately similar to ( 272) AT5G53920 | Symbols: | ribosomal protein L11 methyltransferase-related | chr5:21892124-21894087 FORWARDPrmA prmA PrmA protein|ribosomal protein L11 methyltransferase-related, putative, expressed",2.5479977]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os05g0516400","Transcript","moderately similar to ( 265) AT3G24550 | Symbols: ATPERK1 | ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | chr3:8960411-8963303 FORWARDweakly similar to ( 149) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc S_TKc Pkinase TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 protein|protein kinase, putative, expressed",1.920761]
[null,29.5,"protein.degradation","Os05g0517500","Transcript","moderately similar to ( 388) AT1G78680 | Symbols: ATGGH2 | ATGGH2 (gamma-glutamyl hydrolase 2); omega peptidase | chr1:29593933-29596037 FORWARDmoderately similar to ( 331) GGH_SOYBN Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH) - Glycine max (Soybean) GATase1_Glutamyl_Hydrolase Peptidase_C26 protein|gamma-glutamyl hydrolase precursor, putative, expressed",1.7070465]
[null,"29.5.9","protein.degradation.AAA type","Os05g0519400","Transcript","nearly identical (1055) AT4G04910 | Symbols: NSF | NSF (N-ethylmaleimide sensitive factor); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding | chr4:2489696-2495666 REVERSEweakly similar to ( 173) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) SpoVK RPT1 PRK03992 AAA HflB hflB COG1223 protein|vesicle-fusing ATPase, putative, expressed",-1.0439752]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os05g0526600","Transcript","weakly similar to ( 142) AT3G61550 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:22776444-22777082 FORWARD protein|RING-H2 finger protein ATL2M, putative, expressed",-1.0025091]
[null,"29.2.1.1.3.2.20","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20","Os05g0528200","Transcript","weakly similar to ( 184) AT1G16740 | Symbols: | ribosomal protein L20 family protein | chr1:5727773-5728950 FORWARDvery weakly similar to (89.0) RK20_CHLVU Chloroplast 50S ribosomal protein L20 - Chlorella vulgaris (Green alga) rplT RplT rpl20 Ribosomal_L20 protein|50S ribosomal protein L20, putative, expressed",-1.2454724]
[null,29.4,"protein.postranslational modification","Os05g0555100","Transcript","highly similar to ( 631) AT5G25510 | Symbols: | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | chr5:8882728-8884325 REVERSE B56 protein|transposon protein, putative, unclassified, expressed",4.233563]
[null,"29.2.1.2.2.535","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A","Os05g0556900","Transcript","weakly similar to ( 171) AT1G41880 | Symbols: | 60S ribosomal protein L35a (RPL35aB) | chr1:15651585-15652427 REVERSE Ribosomal_L35Ae COG2451 protein|60S ribosomal protein L35a-3, putative, expressed",-1.0675901]
[null,"29.2.1.2.2.537","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A","Os05g0557000","Transcript","very weakly similar to (83.2) RL37A_ORYSA 60S ribosomal protein L37a - Oryza sativa (Rice) protein|60S ribosomal protein L37a, putative, expressed",-0.94864494]
[null,"29.5.4","protein.degradation.aspartate protease","Os05g0567100","Transcript","highly similar to ( 714) AT1G11910 | Symbols: | aspartyl protease family protein | chr1:4017119-4019874 REVERSEhighly similar to ( 920) ASPR1_ORYSA Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-) - Oryza sativa (Rice) Asp protein|aspartic proteinase oryzasin-1 precursor, putative, expressed",1.4807552]
[null,"29.5.5","protein.degradation.serine protease","Os05g0568900","Transcript","highly similar to ( 599) AT3G27925 | Symbols: DEGP1, Deg1 | DEGP1 (DegP protease 1); serine-type endopeptidase/ serine-type peptidase | chr3:10366659-10368864 REVERSE DegQ PRK10942 PRK10898 PRK10139 protein|OsDegp9 - Putative Deg protease homologue, expressed",1.9017496]
[null,29.4,"protein.postranslational modification","Os05g0593800","Transcript","highly similar to ( 641) AT1G72710 | Symbols: CKL2 | CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr1:27372553-27376178 FORWARD S_TKc Pkinase S_TKc SPS1 Pkinase_Tyr protein|CK1_CaseinKinase_1.8 - CK1 includes the casein kinase 1 kinases, expressed",-0.9744732]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os06g0102700","Transcript","highly similar to ( 607) AT3G54850 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein ligase | chr3:20321524-20323848 FORWARDhighly similar to ( 533) SPL11_ORYSA Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) Ubox U-box protein|spotted leaf 11, putative, expressed",-1.0805988]
[null,"29.5.9","protein.degradation.AAA type","Os06g0109400","Transcript","highly similar to ( 678) AT3G01610 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr3:231787-235057 FORWARDmoderately similar to ( 446) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) SpoVK RPT1 PRK03992 AAA HflB hflB COG1223 protein|AAA family ATPase, putative, expressed",-1.259514]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os06g0114200","Transcript","moderately similar to ( 287) AT5G17060 | Symbols: ATARFB1B | ATARFB1B; GTP binding | chr5:5611056-5612639 FORWARDmoderately similar to ( 211) ARF1_SOLTU ADP-ribosylation factor 1 - Solanum tuberosum (Potato) Arf1_5_like Arf_Arl Arf ARF Arl1 Arf6 Arl5_Arl8 ARLTS1 ARD1 Arl2 Arl4_Arl7 Arl3 Arl6 Arfrp1 Sar1 Arl10_like Arl9_Arfrp2_like Ras_like_GTPase COG1100 SAR Arl2l1_Arl13_like protein|ADP-ribosylation factor 1, putative, expressed",1.5095987]
[null,"29.5.4","protein.degradation.aspartate protease","Os06g0118700","Transcript","weakly similar to ( 191) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE protein|aspartic protease, putative, expressed",7.5530396]
[null,"29.2.1.2.1.20","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20","Os06g0134000","Transcript","weakly similar to ( 179) AT5G62300 | Symbols: | 40S ribosomal protein S20 (RPS20C) | chr5:25021388-25022235 REVERSEmoderately similar to ( 230) RS20_ORYSA 40S ribosomal protein S20 - Oryza sativa (Rice) Ribosomal_S10 RpsJ rps10P protein|S10/S20 domain containing ribosomal protein, putative, expressed",-1.0890528]
[null,29.7,"protein.glycosylation","Os06g0156900","Transcript","moderately similar to ( 429) AT1G53290 | Symbols: | galactosyltransferase family protein | chr1:19871353-19873251 FORWARD Galactosyl_T protein|galactosyltransferase family protein, putative, expressed",-1.0903841]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os06g0176000","Transcript","moderately similar to ( 357) AT3G22110 | Symbols: PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase | chr3:7792819-7793571 REVERSEmoderately similar to ( 422) PSA4A_ORYSA Proteasome subunit alpha type 4-1 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) - Oryza sativa (Rice) proteasome_alpha_type_4 proteasome_alpha PRK03996 proteasome_alpha_archeal PRE1 proteasome_alpha_type_7 proteasome_alpha_type_5 proteasome_protease_HslV proteasome_alpha_type_2 Proteasome proteasome_alpha_type_3 proteasome_alpha_type_6 proteasome_alpha_type_1 Ntn_hydrolase proteasome_beta proteasome_beta_archeal protein|peptidase, T1 family, putative, expressed",-1.3079978]
[null,29.6,"protein.folding","Os06g0196900","Transcript","moderately similar to ( 298) AT5G20720 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 | CPN20 (CHAPERONIN 20); calmodulin binding | chr5:7015015-7016354 FORWARDmoderately similar to ( 263) CH10C_SPIOL 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) groES GroS cpn10 Cpn10 protein|chaperonin, putative, expressed",1.5359535]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os06g0198800","Transcript","moderately similar to ( 390) AT1G11890 | Symbols: SEC22, ATSEC22 | SEC22; transporter | chr1:4011509-4012835 FORWARD SNC1 protein|25.3 kDa vesicle transport protein, putative, expressed",-1.0240699]
[null,29.5,"protein.degradation","Os06g0217700","Transcript","weakly similar to ( 105) AT4G38100 | Symbols: | unknown protein | chr4:17887033-17888177 REVERSE protein|expressed protein",4.255716]
[null,29.4,"protein.postranslational modification","Os06g0232100","Transcript","moderately similar to ( 493) AT1G18160 | Symbols: | protein kinase family protein | chr1:6249126-6253835 FORWARDweakly similar to ( 115) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc S_TKc PTKc Pkinase S_TKc PTKc_Src_like PTKc_Abl PTKc_Csk_like PTKc_InsR_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Fes_like PTKc_FGFR PTKc_Ack_like PTKc_Chk PTKc_Btk_Bmx PTKc_FAK PTKc_EphR PTKc_Frk_like PTKc_Fer PTKc_PDGFR PTKc_EGFR_like PTKc_Tec_Rlk PTKc_Trk PTKc_Csk PTKc_Syk_like PTKc_Itk PTKc_DDR PTKc_Fyn_Yrk PTKc_Ror PTKc_Tie2 PTKc_IGF-1R PTKc_EphR_B PTK_CCK4 PTKc_Met_Ron PTKc_Fes PTKc_Yes PTKc_FGFR3 PTKc_FGFR1 PTKc_FGFR2 PTKc_Lck_Blk PTKc_Axl_like PTKc_Src PTKc_FGFR4 PTKc_EphR_A2 PTKc_Tie1 PTKc_EphR_A PTKc_InsR PTKc_Musk PTKc_ALK_LTK PTKc_TrkA PTKc_Ror1 PTKc_RET PTKc_EGFR PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_HER4 PTKc_DDR_like PTKc_DDR2 PTKc_c-ros PTKc_Hck PTKc_Tyro3 PTKc_HER2 PTKc_TrkB PTKc_TrkC PTKc_Tie PTKc_EphR_A10 PTKc_Ror2 PTK_Ryk PTKc_VEGFR PTKc_Axl PTK_HER3 SPS1 PTKc_Jak1_rpt2 PTKc_Syk PTKc_DDR1 PTKc_Zap-70 PTKc_Tyk2_rpt2 PTKc_Aatyk PTKc_VEGFR3 PTKc_PDGFR_alpha PTKc_PDGFR_beta PTKc_Kit PTKc_VEGFR2 PTKc_CSF-1R PTKc_Aatyk1_Aatyk3 PTK_Jak_rpt1 PTKc_Aatyk2 protein|protein kinase, putative, expressed",-1.0694047]
[null,"29.5.11","protein.degradation.ubiquitin","Os06g0283400","Transcript","highly similar to ( 748) AT2G03890 | Symbols: | phosphatidylinositol 3- and 4-kinase family protein | chr2:1186199-1188151 FORWARD PI3_PI4_kinase protein|phosphatidylinositol 3- and 4-kinase family protein, putative, expressed",0.96081764]
[null,"29.5.4","protein.degradation.aspartate protease","Os06g0304600","Transcript","moderately similar to ( 246) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSEvery weakly similar to (81.3) ASP1_ORYSA Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) Asp protein|aspartic proteinase nepenthesin-2 precursor, putative, expressed",5.0855823000000004]
[null,29.6,"protein.folding","Os06g0308000","Transcript","highly similar to ( 518) AT5G55220 | Symbols: | trigger factor type chaperone family protein | chr5:22397677-22400678 FORWARDtig Tig Trigger_C Trigger_N protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",1.9933592]
[null,29.5,"protein.degradation","Os06g0318600","Transcript","highly similar to ( 578) AT3G57680 | Symbols: | peptidase S41 family protein | chr3:21381054-21383629 FORWARDPrc TSPc Peptidase_S41 PRK11186 protein|OsCttP3 - Putative C-terminal processing peptidase homologue, expressed",-1.1053046]
[null,29.4,"protein.postranslational modification","Os06g0526800","Transcript","moderately similar to ( 336) AT5G53140 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr5:21549228-21552132 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",1.9979123]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0544100","Transcript","moderately similar to ( 266) AT5G45800 | Symbols: MEE62 | MEE62 (maternal effect embryo arrest 62); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr5:18575765-18578972 REVERSEweakly similar to ( 135) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) PTKc Pkinase TyrKc Pkinase_Tyr S_TKc S_TKc PTKc_Ror protein|receptor-like kinase, putative, expressed",1.1184515]
[null,29.4,"protein.postranslational modification","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126]
[null,"29.5.4","protein.degradation.aspartate protease","Os06g0610800","Transcript","moderately similar to ( 304) AT5G10770 | Symbols: | chloroplast nucleoid DNA-binding protein, putative | chr5:3403331-3405331 REVERSE Asp protein|aspartic proteinase, putative, expressed",4.0232925]
[null,29.4,"protein.postranslational modification","Os06g0639500","Transcript","highly similar to ( 712) AT4G32250 | Symbols: | protein kinase family protein | chr4:15570285-15572528 REVERSE S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc SPS1 PTKc protein|protein kinase domain containing protein, expressed",1.2263685]
[null,"29.2.1.1.3.2.35","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35","Os06g0647100","Transcript","weakly similar to ( 107) AT2G24090 | Symbols: | ribosomal protein L35 family protein | chr2:10242038-10243416 FORWARDweakly similar to ( 107) RK35_SPIOL 50S ribosomal protein L35, chloroplast precursor (CL35) - Spinacia oleracea (Spinach) protein|ribosomal protein L35, putative, expressed",2.7081072]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os06g0650100","Transcript","moderately similar to ( 236) AT1G31340 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1 (RELATED TO UBIQUITIN 1); protein binding | chr1:11218076-11219417 REVERSEweakly similar to ( 135) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin Nedd8 UBQ ubiquitin UBL protein|ubiquitin family protein, putative, expressed",-0.9939006]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0654600","Transcript","moderately similar to ( 303) AT1G52540 | Symbols: | protein kinase, putative | chr1:19570298-19571884 REVERSEweakly similar to ( 190) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr PTKc S_TKc TyrKc S_TKc Pkinase PTKc_Srm_Brk PTKc_Src_like PTKc_Jak_rpt2 PTKc_Frk_like PTKc_Trk PTKc_Fes_like SPS1 PTKc_Csk_like PTKc_Src PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_TrkC PTKc_EphR PTKc_Tec_like PTKc_Fyn_Yrk PTKc_Chk PTKc_Btk_Bmx PTKc_Syk_like PTKc_Ack_like PTKc_TrkA PTKc_Yes PTKc_Lck_Blk PTKc_Ror protein|protein kinase, putative, expressed",2.8717299]
[null,29.4,"protein.postranslational modification","Os06g0667500","Transcript","moderately similar to ( 212) AT1G31160 | Symbols: | zinc-binding protein, putative / protein kinase C inhibitor, putative | chr1:11122880-11124106 REVERSEweakly similar to ( 195) ZB14_MAIZE 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) PKCI_related PRK10687 HIT Hit HINT_subgroup protein|histidine triad family protein, putative, expressed",1.6757437]
[null,29.7,"protein.glycosylation","Os06g0679500","Transcript","highly similar to ( 560) AT1G05170 | Symbols: | galactosyltransferase family protein | chr1:1491460-1493931 REVERSE Galactosyl_T protein|galactosyltransferase, putative, expressed",2.9555652]
[null,"29.2.1.1.1.2.24","protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L24","Os06g0683200","Transcript","weakly similar to ( 199) AT5G54600 | Symbols: | 50S ribosomal protein L24, chloroplast (CL24) | chr5:22183046-22184403 FORWARDmoderately similar to ( 213) RK24_TOBAC 50S ribosomal protein L24, chloroplast precursor (CL24) - Nicotiana tabacum (Common tobacco) rplX RplX rpl24 protein|ribosomal protein L24, putative, expressed",2.028394]
[null,29.6,"protein.folding","Os06g0687700","Transcript","highly similar to ( 891) AT3G11830 | Symbols: | chaperonin, putative | chr3:3732734-3736156 FORWARDmoderately similar to ( 243) TCPE2_AVESA T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) TCP1_eta chaperonin_type_I_II cpn60 Cpn60_TCP1 GroL TCP1_alpha TCP1_beta TCP1_gamma TCP1_delta TCP1_epsilon TCP1_theta TCP1_zeta chaperonin_like groEL GroEL Fab1_TCP groEL groEL protein|T-complex protein, putative, expressed",-1.2162161]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os06g0693200","Transcript","moderately similar to ( 408) AT2G18890 | Symbols: | protein kinase family protein | chr2:8184027-8185673 FORWARDmoderately similar to ( 201) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) PTKc Pkinase_Tyr S_TKc TyrKc S_TKc Pkinase SPS1 PTKc_Csk_like PTKc_EGFR_like PTKc_Chk PTKc_Src_like PTKc_FGFR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Ack_like PTKc_Fes_like PTKc_c-ros PTKc_Tec_like PTKc_EphR PTKc_Frk_like PTKc_FAK PTKc_ALK_LTK PTKc_Abl PTKc_Lck_Blk PTKc_EGFR PTKc_Syk_like PTKc_Fer PTKc_Axl_like protein|protein kinase domain containing protein, expressed",2.631947]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os06g0693700","Transcript","moderately similar to ( 231) AT4G31410 | Symbols: | unknown protein | chr4:15244259-15245474 FORWARDDUF1644 protein|expressed protein",-1.0264645]
[null,29.8,"protein.assembly and cofactor ligation","Os06g0694500","Transcript","moderately similar to ( 247) AT4G25910 | Symbols: NFU3, ATCNFU3 | NFU3; structural molecule | chr4:13164128-13165094 FORWARDmoderately similar to ( 201) NIFU1_ORYSA NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) COG0694 NifU protein|nifU, putative, expressed",0.9732111]
[null,29.4,"protein.postranslational modification","Os07g0114000","Transcript","moderately similar to ( 368) AT4G33920 | Symbols: | protein phosphatase 2C family protein / PP2C family protein | chr4:16260876-16262703 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.1291896]
[null,29.6,"protein.folding","Os07g0133700","Transcript","moderately similar to ( 268) AT5G13410 | Symbols: | immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:4299830-4301706 REVERSE protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",2.3460019]
[null,29.4,"protein.postranslational modification","Os07g0150700","Transcript","highly similar to ( 720) AT1G30270 | Symbols: CIPK23, SnRK3.23, ATCIPK23, LKS1 | CIPK23 (CBL-INTERACTING PROTEIN KINASE 23); kinase/ protein binding / protein serine/threonine kinase | chr1:10655270-10658524 FORWARDhighly similar to ( 603) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Srm_Brk PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Fer PTKc_Fes PTKc_FAK PTKc_Ack_like PTKc_Chk PTKc_Syk_like PTKc_Tec_Rlk PTKc_Src_like PTKc_Abl PTKc_Jak1_rpt2 PTKc_Csk PTKc_Tec_like NAF PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_EGFR_like PTKc_Frk_like PTKc_InsR_like PTKc_EphR PTKc_Jak2_Jak3_rpt2 protein|CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.7380567]
[null,29.4,"protein.postranslational modification","Os07g0176600","Transcript","highly similar to ( 583) AT3G04810 | Symbols: ATNEK2 | ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:1318096-1321101 FORWARDweakly similar to ( 122) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr PTKc TyrKc SPS1 PTKc_Jak_rpt2 PTKc_FAK PTKc_Tec_like PTKc_InsR_like PTKc_Ack_like PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 protein|expressed protein",5.1052637]
[null,29.5,"protein.degradation","Os07g0187400","Transcript","highly similar to ( 696) AT3G10420 | Symbols: | sporulation protein-related | chr3:3239307-3241571 FORWARDSpoIIIAA AAA_R3H protein|uncharacterized protein ycf45, putative, expressed",-1.0209169]
[null,"29.2.1.2.1.515","protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A","Os07g0208000","Transcript","moderately similar to ( 249) AT5G59850 | Symbols: | 40S ribosomal protein S15A (RPS15aF) | chr5:24112499-24113084 REVERSEmoderately similar to ( 246) RS15A_BRANA 40S ribosomal protein S15a (PPCB8) - Brassica napus (Rape) rps8p Ribosomal_S8 RpsH protein|40S ribosomal protein S15a, putative, expressed",-0.9711466]
[null,29.7,"protein.glycosylation","Os07g0209000","Transcript","highly similar to ( 638) AT5G66680 | Symbols: DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase | chr5:26617840-26620581 REVERSE DDOST_48kD protein|dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed",-1.5298886]
[null,"29.2.4","protein.synthesis.elongation","Os07g0229700","Transcript","moderately similar to ( 261) AT2G38560 | Symbols: TFIIS | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS); DNA binding / RNA polymerase II transcription elongation factor/ transcription factor | chr2:16134802-16136319 FORWARD TFIIS_M TFS2M protein|transcription elongation factor protein, putative, expressed",3.2081091]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0411200","Transcript","weakly similar to ( 103) AT3G05870 | Symbols: APC11 | APC11; protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:1754463-1754802 FORWARD APC11 protein|anaphase-promoting complex subunit 11, putative, expressed",1.1983309]
[null,29.4,"protein.postranslational modification","Os07g0413700","Transcript","nearly identical (1157) AT2G31320 | Symbols: PARP2, ATPARP2 | PARP2 (POLY(ADP-RIBOSE) POLYMERASE 2); DNA binding / NAD or NADH binding / NAD+ ADP-ribosyltransferase/ zinc ion binding | chr2:13354046-13359578 REVERSEnearly identical (1896) PARP1_ORYSA Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) parp_like PARP PADR1 WGR zf-PARP PARP_reg protein|poly synthetase 1, putative, expressed",1.9944277]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0479100","Transcript","weakly similar to ( 194) AT2G17730 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:7704142-7705312 FORWARD protein|zinc finger, C3HC4 type, domain containing protein, expressed",1.1537548]
[null,"29.1.22","protein.aa activation.asparagine-tRNA ligase","Os07g0485400","Transcript","highly similar to ( 551) AT4G17300 | Symbols: NS1, OVA8, ATNS1 | NS1; asparagine-tRNA ligase | chr4:9681558-9684833 FORWARD asnC AsnS AsxRS_core aspC tRNA-synt_2 EcAsnRS_like_N PRK06462 protein|tRNA synthetases class II domain containing protein, expressed",1.5241178]
[null,29.4,"protein.postranslational modification","Os07g0507500","Transcript","weakly similar to ( 193) AT2G25010 | Symbols: | unknown protein | chr2:10631691-10633547 FORWARD protein|expressed protein",-2.1964633]
[null,"29.5.4","protein.degradation.aspartate protease","Os07g0533000","Transcript","moderately similar to ( 201) AT2G03200 | Symbols: | aspartyl protease family protein | chr2:966506-967891 REVERSE Asp protein|aspartic proteinase nepenthesin precursor, putative, expressed",2.0685098]
[null,29.4,"protein.postranslational modification","Os07g0566200","Transcript","moderately similar to ( 444) AT1G03590 | Symbols: | catalytic/ protein serine/threonine phosphatase | chr1:894480-896257 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.4502363]
[null,29.4,"protein.postranslational modification","Os07g0568600","Transcript","highly similar to ( 805) AT5G19450 | Symbols: CDPK19, CPK8 | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:6558672-6561471 REVERSEhighly similar to ( 516) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc FRQ1 protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.2445259]
[null,"29.5.7","protein.degradation.metalloprotease","Os07g0570100","Transcript","nearly identical (1256) AT2G41790 | Symbols: | peptidase M16 family protein / insulinase family protein | chr2:17429453-17436110 REVERSE Ptr Peptidase_M16 PqqL Peptidase_M16_C protein|insulin-degrading enzyme, putative, expressed",-1.616642]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os07g0618000","Transcript","very weakly similar to (87.4) AT1G53820 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr1:20091491-20092423 FORWARDvery weakly similar to (87.8) EL5_ORYSA E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) protein|RING finger protein, putative, expressed",2.203785]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os07g0618400","Transcript","moderately similar to ( 435) AT1G53730 | Symbols: SRF6 | SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | chr1:20061771-20065475 FORWARDweakly similar to ( 186) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr S_TKc Pkinase S_TKc PTKc TyrKc PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Tec_like PTKc_Tec_Rlk PTKc_Csk_like PTKc_Itk SPS1 PTKc_Fyn_Yrk PTK_Ryk PTKc_Frk_like PTKc_Src PTKc_Lck_Blk PTKc_EphR PTKc_Yes PTKc_Tyk2_rpt2 PTKc_Hck PTKc_FGFR PTKc_Fes_like protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",3.7902634]
[null,29.4,"protein.postranslational modification","Os07g0619800","Transcript","highly similar to ( 780) AT3G50530 | Symbols: CRK | CRK (CDPK-related kinase); ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protein serine/threonine kinase | chr3:18753833-18756487 FORWARDhighly similar to ( 785) CRK_DAUCA CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Tec_like PTKc_Srm_Brk PTKc_Itk PTKc_Src_like PTKc_Tec_Rlk PTKc_Jak_rpt2 PTKc_Btk_Bmx PTKc_Trk PTKc_PDGFR PTKc_Csk_like protein|CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.014764]
[null,29.6,"protein.folding","Os07g0641700","Transcript","weakly similar to ( 129) AT1G14980 | Symbols: CPN10 | CPN10 (CHAPERONIN 10); chaperone binding | chr1:5165930-5166654 REVERSEweakly similar to ( 128) CH10_BRANA 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) cpn10 GroS Cpn10 groES protein|chaperonin, putative, expressed",-2.130233]
[null,"29.2.1.99.99","protein.synthesis.ribosomal protein.unknown.unknown","Os07g0656600","Transcript","moderately similar to ( 288) AT5G13720 | Symbols: | LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19390.1); Has 294 Blast hits to 294 proteins in 98 species: Archae - 18; Bacteria - 168; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | chr5:4427960-4429029 FORWARDUPF0114 protein|uncharacterized UPF0114 domain containing protein, expressed",3.8357258]
[null,"29.2.1.2.2.22","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22","Os07g0674200","Transcript","weakly similar to ( 127) AT3G05560 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) | chr3:1614641-1615204 FORWARD Ribosomal_L22e protein|60S ribosomal protein L22-2, putative, expressed",-1.1605240000000001]
[null,"29.2.1.2.2.18","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18","Os07g0674700","Transcript","moderately similar to ( 291) AT5G27850 | Symbols: | 60S ribosomal protein L18 (RPL18C) | chr5:9873169-9874297 FORWARDmoderately similar to ( 269) RL18_CICAR 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) Ribosomal_L18e RPL18A protein|60S ribosomal protein L18-3, putative, expressed",-0.951622]
[null,29.4,"protein.postranslational modification","Os07g0678600","Transcript","highly similar to ( 550) AT5G58380 | Symbols: CIPK10, PKS2, SIP1, SNRK3.8 | SIP1 (SOS3-INTERACTING PROTEIN 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:23597092-23598531 REVERSEmoderately similar to ( 437) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Fes PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Abl PTKc_Fer PTKc_Tec_like PTKc_Src_like PTKc_Frk_like PTKc_Ack_like PTKc_FAK PTKc_Tec_Rlk PTKc_EphR PTKc_FGFR PTKc_Itk PTKc_EGFR_like PTKc_PDGFR PTKc_Ror PTKc_Btk_Bmx PTKc_Chk PTK_CCK4 protein|CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.0833645]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os07g0686800","Transcript","moderately similar to ( 397) AT1G69790 | Symbols: | protein kinase, putative | chr1:26266838-26268818 FORWARDmoderately similar to ( 202) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_InsR_like PTKc_Trk PTKc_Srm_Brk PTKc_Ror PTKc_EGFR_like PTKc_DDR PTKc_EphR PTKc_Syk_like PTKc_Src_like SPS1 PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Musk PTKc_Tec_like PTKc_Frk_like PTKc_Chk PTKc_Csk PTKc_Fes_like PTKc_Met_Ron PTKc_DDR1 PTKc_RET PTKc_c-ros PTKc_TrkC PTKc_Jak1_rpt2 PTKc_Abl PTKc_TrkA PTKc_DDR_like PTKc_Axl_like PTKc_TrkB PTKc_FGFR PTK_CCK4 PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Itk PTKc_DDR2 PTK_HER3 PTKc_Tyro3 PTKc_IGF-1R PTKc_Fyn_Yrk PTKc_Btk_Bmx PTKc_Yes PTKc_Src PTKc_Fer PTKc_Ror1 PTKc_InsR PTKc_PDGFR PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Lyn PTKc_FAK PTKc_EphR_B PTKc_EGFR protein|tyrosine protein kinase domain containing protein, putative, expressed",2.5641897]
[null,29.4,"protein.postranslational modification","Os07g0687300","Transcript","moderately similar to ( 213) AT5G21170 | Symbols: | 5'-AMP-activated protein kinase beta-2 subunit, putative | chr5:7205718-7208239 FORWARD AMPKbeta_GBD_like protein|SNF1-related protein kinase regulatory subunit beta-1, putative, expressed",-0.95514697]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os07g0691800","Transcript","highly similar to ( 723) AT4G29040 | Symbols: RPT2a | RPT2a (regulatory particle AAA-ATPase 2a); ATPase | chr4:14312369-14314386 FORWARDhighly similar to ( 759) PRS4_ORYSA 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) RPT1 PRK03992 SpoVK HflB AAA hflB COG1223 protein|26S protease regulatory subunit 4, putative, expressed",-1.0429226]
[null,"29.2.1.2.2.81","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1","Os08g0116500","Transcript","very weakly similar to (91.3) AT5G24510 | Symbols: | 60s acidic ribosomal protein P1, putative | chr5:8369295-8369866 REVERSEvery weakly similar to (97.4) RLA1_MAIZE 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize) protein|60S acidic ribosomal protein, putative, expressed",-1.0052239]
[null,29.7,"protein.glycosylation","Os08g0116900","Transcript","moderately similar to ( 453) AT1G32930 | Symbols: | galactosyltransferase family protein | chr1:11931980-11934399 REVERSE Galactosyl_T protein|galactosyltransferase family protein, putative, expressed",1.3238177]
[null,"29.5.4","protein.degradation.aspartate protease","Os08g0208200","Transcript","very weakly similar to (87.0) AT4G30030 | Symbols: | aspartyl protease family protein | chr4:14682210-14683484 REVERSE protein|expressed protein",2.2369096]
[null,"29.3.3","protein.targeting.chloroplast","Os08g0254500","Transcript","moderately similar to ( 453) AT2G18710 | Symbols: SCY1 | SCY1 (SecY Homolog 1); P-P-bond-hydrolysis-driven protein transmembrane transporter | chr2:8112231-8114452 REVERSEhighly similar to ( 511) SECY_ORYSA Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Oryza sativa (Rice)secY SecY SecY secY secY protein|preprotein translocase subunit secY, putative, expressed",2.6227434]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os08g0285600","Transcript","moderately similar to ( 298) AT5G11020 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr5:3486439-3488983 REVERSEweakly similar to ( 182) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase SPS1 PTKc_Jak_rpt2 PTKc_Fes_like PTKc_ALK_LTK PTKc_DDR PTKc_Ror PTKc_c-ros PTKc_Csk_like PTKc_Frk_like PTKc_Trk PTKc_InsR_like PTKc_Srm_Brk PTKc_EphR PTKc_Src_like PTKc_Axl_like PTKc_Chk PTKc_Tyro3 PTKc_Met_Ron PTK_CCK4 PTKc_DDR_like PTKc_Musk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Fer PTKc_FGFR PTKc_EGFR_like PTKc_DDR1 PTKc_Fes PTKc_TrkC PTKc_TrkB PTKc_Ror1 PTKc_TrkA PTKc_Syk_like PTKc_Itk PTKc_Csk PTKc_DDR2 PTKc_Tec_Rlk PTKc_Tie2 PTKc_Axl PTKc_Ack_like PTKc_Btk_Bmx PTKc_EphR_B PTKc_IGF-1R PTKc_RET PTKc_Lck_Blk PTKc_FAK PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Src PTKc_Tie PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_FGFR4 PTKc_EGFR PTKc_Aatyk protein|protein kinase domain containing protein, expressed",1.7579694]
[null,29.8,"protein.assembly and cofactor ligation","Os08g0323400","Transcript","weakly similar to ( 167) AT1G54500 | Symbols: | rubredoxin family protein | chr1:20357084-20357671 REVERSE protein|rubredoxin family protein, putative, expressed",3.436107]
[null,"29.5.11.3","protein.degradation.ubiquitin.E2","Os08g0374100","Transcript","moderately similar to ( 275) AT4G36800 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase | chr4:17341237-17342148 REVERSEvery weakly similar to (86.7) UBC2_MEDSA Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) COG5078 UQ_con UBCc UBCc protein|ubiquitin-conjugating enzyme, putative, expressed",-1.0221735]
[null,29.6,"protein.folding","Os08g0382400","Transcript","highly similar to ( 610) AT3G01480 | Symbols: CYP38 | CYP38 (cyclophilin 38); peptidyl-prolyl cis-trans isomerase | chr3:188569-190252 FORWARDhighly similar to ( 610) TLP40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach)cyclophilin_TLP40_like cyclophilin PpiB protein|peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed",3.748664]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os08g0445000","Transcript","weakly similar to ( 199) AT4G30400 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr4:14867068-14868486 FORWARD protein|RING-H2 finger protein, putative, expressed",4.540898]
[null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os08g0495500","Transcript","moderately similar to ( 381) AT1G55760 | Symbols: | BTB/POZ domain-containing protein | chr1:20847117-20848507 REVERSE BTB protein|C3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C3 subfamily conserved sequence, expressed",-0.97141504]
[null,"29.7.9","protein.glycosylation.beta-1,2-xylosyltransferase(beta-1,2-XylT)","Os08g0503800","Transcript","highly similar to ( 550) AT5G55500 | Symbols: ATXYLT, XYLT | XYLT (ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE); xylosyltransferase | chr5:22482386-22484417 FORWARD protein|beta 1,2-xylosyltransferase, putative, expressed",-0.97760075]
[null,29.4,"protein.postranslational modification","Os08g0512600","Transcript","moderately similar to ( 400) AT1G20930 | Symbols: CDKB2;2 | CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinase | chr1:7292752-7294664 REVERSEmoderately similar to ( 383) CDC2D_ANTMA Cell division control protein 2 homolog D (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) S_TKc S_TKc Pkinase SPS1 protein|cyclin-dependent kinase B2-1, putative, expressed",4.8130536]
[null,"29.5.11","protein.degradation.ubiquitin","Os08g0526700","Transcript","moderately similar to ( 218) AT1G04850 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein | chr1:1365311-1368706 REVERSE PUB protein|ubiquitin-associated protein, putative, expressed",1.2818085]
[null,"29.5.11.20","protein.degradation.ubiquitin.proteasom","Os08g0529100","Transcript","moderately similar to ( 343) AT3G60820 | Symbols: PBF1 | PBF1; peptidase/ threonine-type endopeptidase | chr3:22472038-22473809 REVERSEmoderately similar to ( 392) PSB1_ORYSA Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Oryza sativa (Rice) proteasome_beta_type_1 proteasome_beta proteasome_protease_HslV PRE1 proteasome_beta_archeal Proteasome proteasome_beta_type_3 Ntn_hydrolase protein|peptidase, T1 family, putative, expressed",-2.2647016]
[null,29.6,"protein.folding","Os08g0541400","Transcript","weakly similar to ( 149) AT2G43560 | Symbols: | immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr2:18073995-18075385 REVERSE protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",1.6163689]
[null,"29.2.1.2.2.7","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7","Os08g0542100","Transcript","moderately similar to ( 222) AT1G80750 | Symbols: | 60S ribosomal protein L7 (RPL7A) | chr1:30349052-30350434 FORWARD Ribosomal_L7 protein|60S ribosomal protein L7, putative, expressed",-1.265213]
[null,"29.5.5","protein.degradation.serine protease","Os08g0546700","Transcript","moderately similar to ( 284) AT1G63120 | Symbols: ATRBL2 | ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase | chr1:23409054-23410725 REVERSE Rhomboid COG0705 protein|OsRhmbd14 - Putative Rhomboid homologue, expressed",2.3912983]
[null,"29.5.3","protein.degradation.cysteine protease","Os08g0556900","Transcript","moderately similar to ( 464) AT5G50260 | Symbols: | cysteine proteinase, putative | chr5:20455605-20456862 FORWARDmoderately similar to ( 445) CYSEP_PHAVU Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) Peptidase_C1 Peptidase_C1A Pept_C1 Peptidase_C1A_CathepsinB Peptidase_C1 Peptidase_C1A_CathepsinC Peptidase_C1A_CathepsinX COG4870 protein|vignain precursor, putative, expressed",2.91878]
[null,"29.3.5","protein.targeting.peroxisomes","Os08g0566900","Transcript","moderately similar to ( 254) AT4G14305 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: PMP22 (TAIR:AT4G04470.1); Has 818 Blast hits to 818 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 406; Fungi - 215; Plants - 157; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | chr4:8235335-8236582 REVERSE protein|Mpv17 / PMP22 family domain containing protein, expressed",-1.1461121]
[null,"29.3.1","protein.targeting.nucleus","Os09g0266000","Transcript","moderately similar to ( 202) AT1G71480 | Symbols: | nuclear transport factor 2 (NTF2) family protein | chr1:26932079-26933086 FORWARD protein|nuclear transport factor, putative, expressed",1.5426136]
[null,29.4,"protein.postranslational modification","Os09g0339000","Transcript","moderately similar to ( 314) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 170) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc SPS1 PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Trk PTKc_Fes_like PTKc_Src_like PTKc_EphR_A PTKc_EphR_B PTKc_Frk_like PTKc_FAK PTKc_Ror PTKc_TrkB PTKc_EphR_A2 PTKc_Syk_like PTKc_Csk_like PTKc_Tec_like PTKc_Fer PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Btk_Bmx PTKc_DDR PTKc_TrkC PTKc_Fes PTKc_c-ros PTKc_Lck_Blk PTKc_Itk PTKc_TrkA PTKc_Musk PTKc_Csk PTKc_Tyk2_rpt2 PTKc_DDR_like PTKc_Tec_Rlk PTKc_EGFR_like PTKc_Fyn_Yrk protein|cysteine-rich receptor-like protein kinase 25 precursor, putative, expressed",-1.281829]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os09g0347700","Transcript","highly similar to ( 848) AT2G34250 | Symbols: | protein transport protein sec61, putative | chr2:14462635-14464572 FORWARD PRK08568 SecY SecY protein|protein transport protein Sec61 subunit alpha, putative, expressed",-0.9600374]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os09g0407900","Transcript","highly similar to ( 693) AT4G22285 | Symbols: | ubiquitin thiolesterase/ zinc ion binding | chr4:11779063-11781898 REVERSE Peptidase_C19M UCH Peptidase_C19 Peptidase_C19E Peptidase_C19D Peptidase_C19R protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed",-1.1218462]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0419500","Transcript","moderately similar to ( 226) AT3G53690 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:19898997-19900044 REVERSE protein|protein binding protein, putative, expressed",0.97944754]
[null,"29.5.11.1","protein.degradation.ubiquitin.ubiquitin","Os09g0420800","Transcript","moderately similar to ( 239) AT1G31340 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1 (RELATED TO UBIQUITIN 1); protein binding | chr1:11218076-11219417 REVERSEweakly similar to ( 137) UBIQ_WHEAT Ubiquitin - Triticum aestivum (Wheat) Ubiquitin Nedd8 UBQ ubiquitin UBL protein|ubiquitin family protein, putative, expressed",-1.4746151]
[null,"29.5.4","protein.degradation.aspartate protease","Os09g0423500","Transcript","moderately similar to ( 367) AT1G79720 | Symbols: | aspartyl protease family protein | chr1:29997259-29998951 REVERSE Asp protein|aspartic proteinase, putative, expressed",2.8926609]
[null,29.7,"protein.glycosylation","Os09g0433000","Transcript","weakly similar to ( 175) AT5G57500 | Symbols: | transferase, transferring glycosyl groups | chr5:23286406-23287525 REVERSE protein|hypro1, putative, expressed",2.8307736]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0434900","Transcript","weakly similar to ( 108) AT3G14250 | Symbols: | protein binding / zinc ion binding | chr3:4745963-4746958 REVERSE protein|protein binding protein, putative, expressed",-1.0500418]
[null,"29.5.1","protein.degradation.subtilases","Os09g0441000","Transcript","highly similar to ( 677) AT2G05920 | Symbols: | subtilase family protein | chr2:2269831-2272207 REVERSEPA_subtilisin_like PA protein|OsSub57 - Putative Subtilisin homologue, expressed",2.7460892]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0442100","Transcript","moderately similar to ( 449) AT2G05940 | Symbols: | protein kinase, putative | chr2:2287514-2289270 REVERSEmoderately similar to ( 222) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) PTKc Pkinase_Tyr TyrKc S_TKc Pkinase S_TKc PTKc_EphR PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Fes_like PTKc_Syk_like PTKc_c-ros PTKc_ALK_LTK PTKc_Ror PTKc_EphR_A2 SPS1 PTKc_DDR PTKc_Trk PTKc_EGFR_like PTKc_InsR_like PTKc_Chk PTKc_Src_like PTKc_Tyk2_rpt2 PTKc_Srm_Brk PTKc_Axl_like PTK_CCK4 PTKc_Ack_like PTKc_EphR_B PTKc_DDR_like PTKc_Fer PTKc_Musk PTKc_Frk_like PTKc_EphR_A PTKc_FGFR PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Abl PTKc_Itk PTKc_Tec_like PTKc_Zap-70 PTKc_Csk PTKc_RET PTKc_Ror1 PTKc_TrkC PTKc_FAK PTKc_InsR PTKc_TrkB PTKc_Met_Ron PTKc_Aatyk PTKc_Btk_Bmx PTKc_TrkA PTKc_DDR2 PTKc_Axl protein|tyrosine protein kinase domain containing protein, putative, expressed",1.4673223]
[null,29.7,"protein.glycosylation","Os09g0452900","Transcript","highly similar to ( 510) AT1G77810 | Symbols: | galactosyltransferase family protein | chr1:29260899-29263001 REVERSE Galactosyl_T protein|galactosyltransferase, putative, expressed",-1.1722927]
[null,29.4,"protein.postranslational modification","Os09g0459600","Transcript","highly similar to ( 522) AT1G47380 | Symbols: | protein phosphatase 2C-related / PP2C-related | chr1:17373004-17375305 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphotase protein, putative, expressed",1.6641855]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0468300","Transcript","weakly similar to ( 160) AT3G05200 | Symbols: ATL6 | ATL6; protein binding / zinc ion binding | chr3:1477377-1478573 FORWARD protein|zinc finger, C3HC4 type domain containing protein, expressed",-2.1886747]
[null,"29.5.3","protein.degradation.cysteine protease","Os09g0487700","Transcript","moderately similar to ( 251) AT3G57810 | Symbols: | OTU-like cysteine protease family protein | chr3:21416336-21417809 FORWARD OTU protein|OTU-like cysteine protease family protein, putative, expressed",1.2108345]
[null,"29.2.1.2.2.32","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32","Os09g0501200","Transcript","weakly similar to ( 196) AT4G18100 | Symbols: | 60S ribosomal protein L32 (RPL32A) | chr4:10035715-10036475 REVERSE Ribosomal_L32e RPL32 rpl32e protein|60S ribosomal protein L32, putative, expressed",-1.2014208]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0511000","Transcript","moderately similar to ( 376) AT3G21630 | Symbols: CERK1, LYSM RLK1 | CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1); kinase/ receptor signaling protein/ transmembrane receptor protein kinase | chr3:7615543-7618530 REVERSEweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_Csk_like PTKc_Chk PTKc_Csk PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Tec_like PTKc_Abl PTKc_Fes_like PTKc_Btk_Bmx PTKc_FGFR PTKc_Syk_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_EGFR_like PTKc_Trk PTKc_Lck_Blk PTKc_DDR PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Itk PTKc_ALK_LTK PTKc_Fes PTKc_Yes PTKc_InsR_like PTKc_Srm_Brk PTKc_Tec_Rlk PTKc_Musk PTKc_Ack_like PTKc_FGFR1 PTKc_Hck PTKc_FAK PTK_CCK4 PTKc_Lyn PTKc_Tie2 PTKc_Fer PTKc_FGFR4 PTKc_DDR_like PTKc_EphR_B PTKc_c-ros PTKc_Met_Ron PTKc_TrkA PTKc_FGFR3 PTKc_FGFR2 PTKc_Jak1_rpt2 PTKc_Tie1 PTKc_Syk PTKc_DDR2 PTKc_Ror1 PTKc_Tie PTKc_Axl_like PTKc_TrkC PTKc_DDR1 PTKc_PDGFR PTKc_IGF-1R PTKc_TrkB PTK_HER3 protein|protein kinase domain containing protein, expressed",1.2960294]
[null,"29.5.9","protein.degradation.AAA type","Os09g0515100","Transcript","nearly identical (1078) AT1G05910 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARDmoderately similar to ( 219) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) RPT1 PRK03992 SpoVK AAA HflB hflB COG1223 BROMO protein|bromodomain protein 103, putative, expressed",-1.4211426]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os09g0525400","Transcript","weakly similar to ( 125) AT3G63530 | Symbols: BB, BB2 | BB (BIG BROTHER); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:23456407-23457787 REVERSE protein|zinc RING finger protein, putative, expressed",1.4093543]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os09g0533600","Transcript","moderately similar to ( 393) AT5G47070 | Symbols: | protein kinase, putative | chr5:19118683-19120528 REVERSEmoderately similar to ( 204) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc Pkinase PTKc S_TKc S_TKc PTKc_Jak_rpt2 PTKc_Syk_like PTKc_Csk_like PTKc_Tyk2_rpt2 PTKc_DDR PTKc_EphR SPS1 PTKc_EGFR_like PTKc_Fes_like PTKc_InsR_like PTKc_Ack_like PTKc_Src_like PTKc_Lck_Blk PTKc_Trk PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Tec_like PTKc_Frk_like PTKc_c-ros PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Musk PTKc_DDR2 PTKc_Csk PTKc_Axl_like PTKc_Chk PTKc_Abl PTK_CCK4 PTKc_Jak1_rpt2 PTK_HER3 PTKc_TrkC PTKc_TrkA PTKc_Btk_Bmx PTKc_DDR1 PTKc_DDR_like PTKc_Fer PTKc_Met_Ron PTKc_Fes PTKc_TrkB PTKc_EphR_A2 PTKc_InsR PTKc_FGFR PTKc_ALK_LTK PTKc_Tec_Rlk PTKc_EphR_B PTKc_FAK PTKc_Tie1 PTKc_IGF-1R PTKc_PDGFR PTKc_HER4 PTKc_EphR_A PTKc_EphR_A10 PTKc_Tie2 PTKc_Src PTKc_Fyn_Yrk PTKc_Tie PTKc_RET PTKc_Yes protein|tyrosine protein kinase domain containing protein, putative, expressed",-1.25211]
[null,"29.2.1.1.3.2.1185","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L18/L5","Os09g0549700","Transcript","weakly similar to ( 147) AT3G45020 | Symbols: | 50S ribosomal protein-related | chr3:16469167-16469568 REVERSE protein|ribosomal L18p/L5e family protein, putative, expressed",-1.0638255]
[null,29.4,"protein.postranslational modification","Os10g0157400","Transcript","weakly similar to ( 158) AT1G67580 | Symbols: | protein kinase family protein | chr1:25327727-25330965 REVERSEweakly similar to ( 129) CDC22_ORYSA Cell division control protein 2 homolog 2 (EC 2.7.11.22) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc protein|calcium-dependent protein kinase 12, putative, expressed",-1.0128752]
[null,"29.5.2","protein.degradation.autophagy","Os10g0163100","Transcript","highly similar to ( 788) AT2G31260 | Symbols: APG9, ATAPG9 | APG9 (autophagy 9) | chr2:13322291-13326293 REVERSE APG9 protein|autophagy protein 9, putative, expressed",1.2469201]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os10g0180800","Transcript","moderately similar to ( 388) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDmoderately similar to ( 201) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc S_TKc Pkinase PTKc Pkinase_Tyr SPS1 PTKc_Trk PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Ack_like PTKc_Srm_Brk PTKc_Src_like PTKc_EphR PTKc_Syk_like PTKc_Met_Ron PTKc_Tec_like PTKc_Csk_like PTKc_Frk_like PTKc_DDR PTKc_Itk PTKc_TrkA PTKc_EGFR_like PTKc_Fer PTKc_EphR_A2 PTKc_TrkB PTKc_Btk_Bmx PTKc_Axl_like PTKc_FAK PTKc_Ror PTKc_TrkC PTKc_Fes PTKc_InsR_like PTKc_EphR_A PTKc_c-ros PTKc_Tec_Rlk PTKc_Tyk2_rpt2 PTKc_RET PTKc_Lyn PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_EphR_B PTKc_Syk PTKc_Chk PTKc_Lck_Blk PTKc_FGFR PTK_CCK4 PTKc_DDR_like PTKc_DDR2 PTKc_Csk PTKc_ALK_LTK PTKc_Ror1 PTKc_Src PTKc_PDGFR PTKc_Zap-70 PTKc_DDR1 PTKc_Yes PTKc_HER4 PTKc_Musk protein|OsWAK112d - OsWAK receptor-like protein kinase, expressed",-2.148242]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os10g0389800","Transcript","highly similar to ( 680) AT1G53730 | Symbols: SRF6 | SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | chr1:20061771-20065475 FORWARDmoderately similar to ( 211) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc S_TKc Pkinase TyrKc PTKc PTKc_Tec_like PTKc_Jak_rpt2 PTKc_Src_like PTKc_Srm_Brk PTKc_Tec_Rlk PTKc_Itk PTKc_Ror PTKc_EphR PTKc_Src PTKc_Met_Ron PTKc_Csk_like SPS1 PTKc_Frk_like PTKc_Ack_like PTKc_EGFR_like PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Trk PTKc_FGFR PTKc_Fes_like PTKc_Lck_Blk PTKc_Yes PTKc_Chk PTKc_Tyk2_rpt2 PTKc_Tyro3 PTKc_Axl_like PTKc_ALK_LTK PTKc_Hck PTKc_Abl PTKc_Lyn PTK_Ryk PTKc_Ror1 protein|STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed",3.1345685]
[null,"29.5.11.4.5.2","protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.BTB/POZ","Os10g0435400","Transcript","weakly similar to ( 176) AT5G19000 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding | chr5:6342563-6344641 FORWARDMATH BTB protein|MBTB60 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed",1.9783186]
[null,29.6,"protein.folding","Os10g0462900","Transcript","highly similar to ( 880) AT3G23990 | Symbols: HSP60, HSP60-3B | HSP60 (HEAT SHOCK PROTEIN 60); ATP binding | chr3:8669013-8672278 FORWARDhighly similar to ( 943) CH62_MAIZE Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Zea mays (Maize) GroEL groEL groEL groEL groEL groEL groEL GroL chaperonin_type_I_II Cpn60_TCP1 chaperonin_like cpn60 TCP1_beta TCP1_zeta protein|T-complex protein, putative, expressed",-1.9924326]
[null,"29.3.3","protein.targeting.chloroplast","Os10g0492101","Transcript","highly similar to ( 695) AT1G06950 | Symbols: ATTIC110, TIC110 | TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110) | chr1:2130303-2135563 REVERSE protein|ATTIC110/TIC110, putative, expressed",-1.2841135]
[null,"29.3.3","protein.targeting.chloroplast","Os10g0492300","Transcript","moderately similar to ( 278) AT1G06950 | Symbols: ATTIC110, TIC110 | TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110) | chr1:2130303-2135563 REVERSE protein|IAP100, putative, expressed",2.230601]
[null,"29.3.4.99","protein.targeting.secretory pathway.unspecified","Os10g0504600","Transcript","moderately similar to ( 375) AT5G41140 | Symbols: | unknown protein | chr5:16468726-16472546 FORWARD protein|protein transport protein-related, putative, expressed",3.8581426]
[null,29.4,"protein.postranslational modification","Os10g0539600","Transcript","highly similar to ( 721) AT2G17290 | Symbols: CPK6, ATCDPK3 | CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr2:7517005-7519239 FORWARDnearly identical (1090) CDPK1_ORYSA Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 FRQ1 protein|CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.3820488]
[null,29.4,"protein.postranslational modification","Os10g0564500","Transcript","moderately similar to ( 500) AT4G33950 | Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase | chr4:16272819-16274657 FORWARDhighly similar to ( 615) SAPK3_ORYSA Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Jak1_rpt2 PTKc_Btk_Bmx PTKc_Tec_like PTKc_Syk_like PTKc_Tec_Rlk PTKc_Csk_like PTKc_Ack_like protein|CAMK_CAMK_like.41 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",1.4809216]
[null,"29.3.3","protein.targeting.chloroplast","Os10g0567400","Transcript","highly similar to ( 674) AT1G44446 | Symbols: CH1, ATCAO, CAO | CH1 (CHLORINA 1); chlorophyllide a oxygenase | chr1:16849132-16851152 REVERSEhighly similar to ( 960) CAO_ORYSA Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice)Rieske_RO_Alpha_Cao HcaE Rieske_RO_Alpha_PhDO_like Rieske_RO_Alpha_N Rieske_RO_Alpha_VanA_DdmC Rieske_RO_Alpha_Tic55 PaO Rieske_RO_Alpha_PaO protein|chlorophyllide a oxygenase, chloroplast precursor, putative, expressed",2.1365983]
[null,29.4,"protein.postranslational modification","Os11g0113700","Transcript","moderately similar to ( 490) AT5G07070 | Symbols: CIPK2, SnRK3.2 | CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:2196743-2198113 REVERSEmoderately similar to ( 404) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Abl PTKc_Fes_like PTKc_Fer PTKc_FAK PTKc_Fes PTKc_Tec_like PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_Ack_like PTKc_FGFR PTKc_Chk PTKc_Jak1_rpt2 PTKc_InsR_like PTKc_Trk PTKc_Btk_Bmx PTKc_EphR_A PTKc_Itk PTKc_Tec_Rlk PTKc_Syk_like PTKc_Lck_Blk NAF PTKc_PDGFR PTKc_Csk PTKc_Tyro3 PTKc_Fyn_Yrk PTKc_Axl_like PTKc_FGFR4 PTKc_Hck PTKc_FGFR1 protein|CAMK_KIN1/SNF1/Nim1_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.5787117]
[null,"29.5.11.4.2","protein.degradation.ubiquitin.E3.RING","Os11g0116200","Transcript","weakly similar to ( 111) AT5G01880 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:339017-339496 FORWARD protein|LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed",2.6963356]
[null,"29.3.4.3","protein.targeting.secretory pathway.vacuole","Os11g0116550","Transcript","highly similar to ( 971) AT3G52850 | Symbols: VSR1, BP-80, ATELP, VSR-1, BP80, BP80B, ATELP1, ATVSR1 | VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1); amino-terminal vacuolar sorting propeptide binding | chr3:19587999-19591690 FORWARDhighly similar to ( 906) VSR1_PEA Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea)PA_VSR PA_C_RZF_like protein|vacuolar-sorting receptor precursor, putative, expressed",-2.1221395]
[null,29.5,"protein.degradation","Os11g0134700","Transcript","moderately similar to ( 308) AT5G04200 | Symbols: AtMC9 | AtMC9 (metacaspase 9); cysteine-type peptidase | chr5:1153893-1154870 FORWARD Peptidase_C14 protein|ICE-like protease p20 domain containing protein, putative, expressed",2.1503115]
[null,"29.2.1.2.2.10","protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10","Os11g0220800","Transcript","moderately similar to ( 369) AT1G66580 | Symbols: | 60S ribosomal protein L10 (RPL10C) | chr1:24839208-24840439 FORWARDmoderately similar to ( 437) RL101_ORYSA 60S ribosomal protein L10-1 (Putative tumor suppressor SC34) (Protein QM) - Oryza sativa (Rice) rpl10e RplP Ribosomal_L16 protein|ribosomal protein, putative, expressed",-0.9831174]
[null,29.4,"protein.postranslational modification","Os11g0242200","Transcript","moderately similar to ( 228) AT2G40180 | Symbols: ATHPP2C5 | ATHPP2C5; catalytic/ protein serine/threonine phosphatase | chr2:16782522-16784014 FORWARD PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-1.6713899]
[null,"29.3.4.2","protein.targeting.secretory pathway.golgi","Os11g0433500","Transcript","nearly identical (1067) AT1G05520 | Symbols: | transport protein, putative | chr1:1631126-1635703 REVERSE SEC23 Sec23-like Sec23_trunk trunk_domain COG5028 Sec23_helical Sec23_BS protein|protein transport protein, putative, expressed",-1.0646049]
[null,"29.5.5","protein.degradation.serine protease","Os11g0461000","Transcript","moderately similar to ( 236) AT1G33540 | Symbols: scpl18 | scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | chr1:12162349-12164700 REVERSEweakly similar to ( 198) CBP1_HORVU Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine carbo Peptidase_S10 COG2939 protein|OsSCP62 - Putative Serine Carboxypeptidase homologue, expressed",1.9769455]
[null,"29.5.11.2","protein.degradation.ubiquitin.E1","Os11g0497000","Transcript","moderately similar to ( 397) AT4G24940 | Symbols: SAE1A, AT-SAE1-1, ATSAE1A | SAE1A (SUMO-ACTIVATING ENZYME 1A); SUMO activating enzyme | chr4:12823651-12825971 FORWARDvery weakly similar to (92.0) UBE11_WHEAT Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) Aos1_SUMO Ube1_repeat1 E1-1_like APPBP1_RUB ThiF ThiF_MoeB_HesA_family protein|ThiF family domain containing protein, putative, expressed",-1.0245605]
[null,29.1,"protein.aa activation","Os11g0604700","Transcript","moderately similar to ( 272) AT5G66410 | Symbols: PLP3b | PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding | chr5:26519909-26521459 FORWARD Phd_like_TxnDC9 Phd_like protein|thioredoxin domain-containing protein 9, putative, expressed",-1.2840924]
[null,"29.1.11","protein.aa activation.serine-tRNA ligase","Os11g0610900","Transcript","highly similar to ( 698) AT1G11870 | Symbols: ATSRS, OVA7, SRS | SRS (SERYL-TRNA SYNTHETASE); serine-tRNA ligase | chr1:4003895-4006556 FORWARDmoderately similar to ( 238) SYS_HELAN Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) PRK05431 SerS SerRS_core tRNA-synt_2b Seryl_tRNA_N Gly_His_Pro_Ser_Thr_tRS_core protein|seryl-tRNA synthetase, putative, expressed",2.055989]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os11g0667700","Transcript","moderately similar to ( 242) AT3G55950 | Symbols: CCR3, ATCRR3 | CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase | chr3:20753903-20756347 REVERSEmoderately similar to ( 201) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc S_TKc Pkinase_Tyr Pkinase PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Trk PTKc_Fes_like PTKc_Csk_like PTKc_EphR_A2 PTKc_FAK protein|protein kinase domain containing protein, expressed",-1.307413]
[null,"29.4.1.57","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII","Os11g0672200","Transcript","moderately similar to ( 247) AT4G21390 | Symbols: B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding | chr4:11394458-11397474 REVERSEweakly similar to ( 171) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Chk PTKc_Frk_like PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Axl_like PTKc_EphR_B PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like PTKc_Csk PTKc_Abl PTKc_Ror1 PTKc_Fes_like PTKc_Tec_Rlk PTKc_EphR_A2 PTK_CCK4 protein|cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed",-2.140228]
[null,29.4,"protein.postranslational modification","Os12g0101800","Transcript","highly similar to ( 873) AT3G45780 | Symbols: PHOT1, NPH1, JK224, RPT1 | PHOT1 (PHOTOTROPIN 1); FMN binding / blue light photoreceptor/ kinase/ protein binding / protein serine/threonine kinase | chr3:16818557-16823960 FORWARDmoderately similar to ( 330) G11A_ORYSA Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 PTKc_Jak2_Jak3_rpt2 protein|AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed",-1.3193709]
[null,"29.4.1.55","protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V","Os12g0109850","Transcript","moderately similar to ( 389) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEvery weakly similar to (87.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.697567]
[null,29.4,"protein.postranslational modification","Os12g0113500","Transcript","moderately similar to ( 495) AT5G07070 | Symbols: CIPK2, SnRK3.2 | CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr5:2196743-2198113 REVERSEmoderately similar to ( 405) CIPK1_ORYSA CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Abl PTKc_Fes_like PTKc_Fer PTKc_FAK PTKc_Fes PTKc_Tec_like PTKc_Src_like PTKc_EphR PTKc_Frk_like PTKc_Ror PTKc_FGFR PTKc_Ack_like PTKc_Jak1_rpt2 PTKc_Trk PTKc_Chk PTKc_EphR_A PTKc_InsR_like PTKc_Btk_Bmx PTKc_Itk PTKc_Tec_Rlk PTKc_Lck_Blk NAF PTKc_Syk_like PTKc_Csk PTKc_PDGFR PTKc_Fyn_Yrk PTKc_Tyro3 PTKc_FGFR4 PTKc_FGFR1 PTKc_Hck PTKc_Axl_like protein|CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",2.4671364]
[null,"29.2.4","protein.synthesis.elongation","Os12g0115900","Transcript","moderately similar to ( 301) AT3G08740 | Symbols: | elongation factor P (EF-P) family protein | chr3:2654788-2656154 REVERSEPRK00529 Efp PRK04542 PRK12426 EFP_N Elong-fact-P_C protein|elongation factor P, putative, expressed",2.7061088]
[null,29.4,"protein.postranslational modification","Os12g0162100","Transcript","moderately similar to ( 400) AT1G49160 | Symbols: WNK7 | WNK7; kinase/ protein kinase | chr1:18179473-18181867 REVERSEvery weakly similar to (89.7) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase TyrKc Pkinase_Tyr PTKc SPS1 PTKc_Jak_rpt2 PTKc_Jak1_rpt2 PTKc_Srm_Brk PTKc_Ack_like PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_EGFR_like PTKc_Src_like PTKc_InsR_like PTKc_Syk_like PTKc_Tyk2_rpt2 protein|STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed",-1.1642562]
[null,"29.7.13","protein.glycosylation.alpha-1,4-fucosyltransferase(alpha-1,4-FucT)","Os12g0170600","Transcript","moderately similar to ( 485) AT1G71990 | Symbols: FUT13, ATFUT13, FUCTC, FT4-M | FUT13 (FUCOSYLTRANSFERASE 13); fucosyltransferase/ transferase, transferring glycosyl groups | chr1:27100345-27102097 FORWARD Glyco_transf_10 protein|alpha-1,4-fucosyltransferase, putative, expressed",-0.9481948]
[null,29.4,"protein.postranslational modification","Os12g0198200","Transcript","moderately similar to ( 217) AT1G07160 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr1:2198155-2199678 REVERSE PP2Cc PP2Cc PP2C PTC1 protein|protein phosphatase 2C, putative, expressed",-2.2590168]
[null,29.5,"protein.degradation","Os12g0209000","Transcript","highly similar to ( 538) AT1G33290 | Symbols: | sporulation protein-related | chr1:12074125-12075989 FORWARDSpoIIIAA protein|uncharacterized protein ycf45, putative, expressed",1.7735147]
[null,"29.2.1.1.2.2.37","protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.50S subunit.L37","Os12g0244200","Transcript","weakly similar to ( 122) AT3G01740 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37, mitochondrial (InterPro:IPR013870); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14290.1); Has 117 Blast hits to 117 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 56; Fungi - 22; Plants - 27; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr3:268118-268498 FORWARD Ribosomal_L37 protein|expressed protein",-1.104826]
[null,29.6,"protein.folding","Os12g0277500","Transcript","highly similar to ( 766) AT2G28000 | Symbols: CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding | chr2:11926603-11929184 FORWARDhighly similar to ( 821) RUBA_WHEAT RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) - Triticum aestivum (Wheat) GroEL groEL groEL groEL groEL groEL groEL GroL Cpn60_TCP1 chaperonin_type_I_II chaperonin_like cpn60 protein|T-complex protein, putative, expressed",2.0210934]
[null,"29.5.9","protein.degradation.AAA type","Os12g0431100","Transcript","highly similar to ( 508) AT5G40010 | Symbols: AATP1 | AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr5:16020218-16021762 REVERSE AAA protein|ATPase 3, putative, expressed",-2.2190163]
[null,"29.5.11.4.3.2","protein.degradation.ubiquitin.E3.SCF.FBOX","Os12g0517100","Transcript","moderately similar to ( 312) AT1G80570 | Symbols: | F-box family protein (FBL14) | chr1:30290828-30292231 FORWARD protein|OsFBL60 - F-box domain and LRR containing protein, expressed",1.7258983]
[null,29.1,"protein.aa activation","Os12g0540900","Transcript","highly similar to ( 599) AT3G04600 | Symbols: | tRNA synthetase class I (W and Y) family protein | chr3:1243152-1245958 FORWARD PRK12285 TrpRS_core TrpS Tyr_Trp_RS_core PRK08560 tRNA-synt_1b protein|tRNA synthetase, putative, expressed",1.3194551]
[null,"29.2.4","protein.synthesis.elongation","Os12g0541500","Transcript","moderately similar to ( 207) AT4G29060 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARDRpsA Tex rpsA protein|elongation factor TS family protein, expressed",3.6308708]
[null,29.6,"protein.folding","Os12g0562900","Transcript","moderately similar to ( 275) AT5G49510 | Symbols: PDF3 | PDF3 (PREFOLDIN 3); unfolded protein binding | chr5:20080729-20082456 FORWARD Prefoldin protein|prefoldin, putative, expressed",-1.0359453]
[null,"29.2.1.1.3.1.6","protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6","Os12g0563200","Transcript","moderately similar to ( 238) AT3G17170 | Symbols: RFC3 | RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome | chr3:5853186-5854853 REVERSErpsF RpsF protein|ribosomal protein S6, putative, expressed",1.1762419]
[null,29.4,"protein.postranslational modification","Os12g0604700","Transcript","highly similar to ( 585) AT3G04810 | Symbols: ATNEK2 | ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | chr3:1318096-1321101 FORWARDweakly similar to ( 110) M2K1_ORYSA Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Jak_rpt2 PTKc_FAK PTKc_Csk PTKc_Srm_Brk PTKc_InsR_like PTKc_Itk PTKc_Ack_like PTKc_EphR_B PTKc_Ror protein|LSTK-1-like kinase, putative, expressed",2.9530475]
[]
[]
[null,30.1,"signalling.in sugar and nutrient physiology","Os04g0620600","Transcript","protein|nitrate-induced NOI protein, expressed",2.4121397]
[null,"30.1.1","signalling.in sugar and nutrient physiology","Os06g0188400","Transcript","weakly similar to ( 193) AT5G11210 | Symbols: ATGLR2.5, GLR2.5 | ATGLR2.5; intracellular ligand-gated ion channel | chr5:3571214-3574537 REVERSEweakly similar to ( 126) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) ANF_receptor protein|glutamate receptor 2.7 precursor, putative, expressed",1.5466343]
[null,"30.1.1","signalling.in sugar and nutrient physiology","Os06g0188800","Transcript","weakly similar to ( 151) AT2G29110 | Symbols: ATGLR2.8, GLR2.8 | ATGLR2.8; intracellular ligand-gated ion channel | chr2:12506880-12510552 REVERSEweakly similar to ( 115) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) Lig_chan protein|glutamate receptor 2.8 precursor, putative, expressed",1.8276078]
[null,"30.1.1","signalling.in sugar and nutrient physiology","Os02g0787600","Transcript","highly similar to ( 603) AT2G29100 | Symbols: ATGLR2.9, GLR2.9 | ATGLR2.9; intracellular ligand-gated ion channel | chr2:12501092-12504912 REVERSEmoderately similar to ( 407) GLR31_ORYSA Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) Lig_chan ANF_receptor LivK PBPe protein|glutamate receptor, putative, expressed",-2.1467886]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0480400","Transcript","highly similar to ( 649) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 175) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase PTKc S_TKc Pkinase_Tyr TyrKc S_TKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_Fes_like PTKc_Frk_like PTKc_Lck_Blk PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Csk PTKc_Abl PTKc_Lyn PTKc_Chk PTKc_FGFR PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Ror PTKc_EphR PTKc_InsR_like PTKc_Trk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",2.7635052]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0649700","Transcript","moderately similar to ( 327) AT5G43020 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:17255426-17257742 REVERSEweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Src PTKc_Lck_Blk PTKc_Frk_like PTKc_Jak_rpt2 protein|receptor kinase, putative, expressed",2.0595152]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0133900","Transcript","highly similar to ( 522) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 147) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc PTKc Pkinase_Tyr TyrKc SPS1 PTKc_Src_like PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Yes protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.7740196]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0104200","Transcript","moderately similar to ( 205) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDweakly similar to ( 187) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor precursor, putative, expressed",1.015623]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os01g0819100","Transcript","highly similar to ( 610) AT5G58300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:23572821-23574871 FORWARDweakly similar to ( 174) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc PTKc_Jak_rpt2 PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Fes_like PTKc_Frk_like PTKc_Trk PTKc_Tie2 PTKc_Lyn PTKc_Lck_Blk PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_EphR PTKc_Tie1 PTKc_Ror PTKc_Fyn_Yrk PTKc_FGFR PTKc_Itk PTKc_Chk PTKc_Srm_Brk protein|inactive receptor kinase At2g26730 precursor, putative, expressed",1.1429157]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os10g0492400","Transcript","weakly similar to ( 190) AT1G68400 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:25646401-25648916 REVERSEweakly similar to ( 103) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr PTKc TyrKc SPS1 protein|receptor kinase like protein, putative, expressed",3.4061668]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os09g0400500","Transcript","moderately similar to ( 397) AT3G17840 | Symbols: RLK902 | RLK902; ATP binding / kinase/ protein serine/threonine kinase | chr3:6106092-6108430 FORWARDweakly similar to ( 119) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc S_TKc Pkinase_Tyr SPS1 TyrKc PTKc PTKc_Src_like PTKc_Jak_rpt2 PTKc_Csk_like protein|inactive receptor kinase At2g26730 precursor, putative, expressed",-1.3753079]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os07g0568700","Transcript","moderately similar to ( 211) AT5G06860 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARDhighly similar to ( 610) PGIP1_ORYSA Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) - Oryza sativa (Rice) protein|polygalacturonase inhibitor 1 precursor, putative, expressed",1.8588246]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os05g0406800","Transcript","moderately similar to ( 476) AT1G03440 | Symbols: | leucine-rich repeat family protein | chr1:852681-853874 FORWARDweakly similar to ( 119) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase precursor, putative, expressed",2.1089206]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0335500","Transcript","highly similar to ( 906) AT3G56370 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:20899403-20902390 REVERSEmoderately similar to ( 333) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc PTKc Pkinase TyrKc S_TKc PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Syk_like PTKc_EGFR_like PTKc_Ack_like PTK_CCK4 PTKc_Ror PTKc_Srm_Brk PTKc_Frk_like PTKc_Fes_like PTKc_c-ros PTKc_Csk_like PTKc_EphR PTKc_Jak2_Jak3_rpt2 PTKc_Trk PTKc_InsR_like PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_Itk PTKc_Src PTKc_Lck_Blk PTKc_Met_Ron PTKc_Aatyk PTKc_Yes PTKc_Hck PTKc_Musk PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkC PTKc_Ror1 PTKc_Ror2 PTK_HER3 PTKc_Lyn PTKc_Abl PTKc_Aatyk1_Aatyk3 PTKc_TrkB PTKc_FAK PTKc_HER4 PTKc_DDR protein|receptor-like protein kinase precursor, putative, expressed",2.4075158]
[null,"30.2.3","signalling.receptor kinases.leucine rich repeat III","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os05g0261700","Transcript","moderately similar to ( 490) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEvery weakly similar to (95.1) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|SHR5-receptor-like kinase, putative, expressed",2.650769]
[null,"30.2.8.2","signalling.receptor kinases.leucine rich repeat VIII-2","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0308800","Transcript","moderately similar to ( 468) AT5G14210 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:4578503-4581374 REVERSEweakly similar to ( 107) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|expressed protein",4.467394]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os04g0683600","Transcript","highly similar to ( 645) AT1G63430 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:23522896-23526451 FORWARDweakly similar to ( 167) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc protein|expressed protein",2.266947]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0478600","Transcript","moderately similar to ( 212) AT3G17640 | Symbols: | leucine-rich repeat family protein | chr3:6032393-6033583 FORWARD protein|polygalacturonase inhibitor 1 precursor, putative, expressed",4.090776]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0773700","Transcript","nearly identical (1300) AT5G65700 | Symbols: BAM1 | BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase | chr5:26281826-26284945 FORWARDmoderately similar to ( 460) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase_Tyr S_TKc TyrKc Pkinase S_TKc PTKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Src_like SPS1 PTKc_Srm_Brk PTKc_Frk_like PTKc_Csk_like PTKc_Tec_like PTKc_Syk_like PTKc_Ack_like PTKc_Itk PTKc_Tec_Rlk PTKc_Trk PTKc_EGFR_like PTKc_EphR_A2 PTKc_Fes_like PTKc_EphR_B PTKc_InsR_like PTKc_Met_Ron PTKc_Lck_Blk PTKc_Src PTK_HER3 PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Btk_Bmx PTKc_Lyn PTKc_EphR_A PTKc_Yes PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_Ror PTKc_Jak1_rpt2 PTKc_TrkA PTKc_Axl_like PTKc_Csk PTKc_TrkC PTKc_FGFR PTKc_HER4 PTKc_Chk PTKc_FAK PTKc_EphR_A10 PTKc_TrkB PTKc_Hck PTKc_Fer PTKc_Aatyk PTK_CCK4 PTKc_c-ros protein|receptor protein kinase CLAVATA1 precursor, putative, expressed",4.5269656]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os06g0179800","Transcript","moderately similar to ( 271) AT1G58190 | Symbols: AtRLP9 | AtRLP9 (Receptor Like Protein 9); protein binding | chr1:21540720-21547996 FORWARDweakly similar to ( 151) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) protein|receptor-like protein kinase 5 precursor, putative, expressed",2.0126634]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os05g0522600","Transcript","highly similar to ( 746) AT5G25930 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr5:9050880-9053978 FORWARDmoderately similar to ( 373) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) S_TKc S_TKc Pkinase_Tyr PTKc Pkinase TyrKc PTKc_EphR SPS1 PTKc_Trk PTKc_Jak_rpt2 PTKc_Musk PTKc_EphR_A2 PTKc_InsR_like PTKc_DDR PTKc_Ror PTKc_Csk_like PTKc_EphR_B PTK_CCK4 PTKc_Srm_Brk PTKc_Src_like PTKc_EphR_A PTKc_EGFR_like PTKc_TrkC PTKc_Frk_like PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Abl PTKc_TrkA PTKc_Ack_like PTKc_Syk_like PTKc_FGFR4 PTKc_DDR_like PTKc_Fes_like PTKc_FGFR PTKc_DDR1 PTKc_Src PTKc_Lck_Blk PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_Met_Ron PTKc_Fyn_Yrk PTKc_TrkB PTKc_ALK_LTK PTKc_c-ros protein|receptor-like protein kinase 5 precursor, putative, expressed",-1.2118931]
[null,"30.2.11","signalling.receptor kinases.leucine rich repeat XI","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"30.2.12","signalling.receptor kinases.leucine rich repeat XII","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"30.2.16","signalling.receptor kinases.Catharanthus roseus-like RLK1","Os03g0281500","Transcript","highly similar to ( 748) AT3G46290 | Symbols: | protein kinase, putative | chr3:17013009-17015501 FORWARDmoderately similar to ( 264) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like SPS1 PTKc_Fes_like PTKc_Trk PTKc_Src_like PTK_CCK4 PTKc_Met_Ron PTKc_Itk PTKc_EphR PTKc_Tec_like PTKc_FGFR PTKc_Csk PTKc_Frk_like PTKc_Ror PTKc_Fer PTKc_TrkA PTKc_InsR_like PTKc_TrkB PTKc_Syk_like PTKc_Ack_like PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_FGFR1 PTKc_Jak2_Jak3_rpt2 PTKc_Tie2 PTKc_Tie1 PTKc_FGFR4 PTKc_FGFR2 PTKc_TrkC PTKc_Chk PTKc_Fyn_Yrk PTKc_RET PTKc_Src PTKc_EphR_A2 PTKc_ALK_LTK PTKc_Lyn PTKc_EGFR_like PTKc_FGFR3 PTKc_Axl_like PTKc_Lck_Blk PTKc_Musk PTKc_c-ros PTKc_DDR PTKc_Abl PTKc_Tec_Rlk PTKc_Fes PTKc_FAK PTKc_Yes PTKc_Tie PTKc_IGF-1R PTKc_EphR_B PTKc_InsR PTKc_Jak1_rpt2 PTKc_PDGFR PTKc_Hck PTK_Ryk PTK_HER3 PTKc_EphR_A PTKc_Ror1 protein|TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed",-1.0393327]
[null,"30.2.17","signalling.receptor kinases.DUF 26","Os05g0442550","Transcript","moderately similar to ( 328) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDhighly similar to ( 697) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 rve protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.3304685]
[null,"30.2.17","signalling.receptor kinases.DUF 26","Os12g0456000","Transcript","moderately similar to ( 230) AT4G23160 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARDmoderately similar to ( 285) POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco)RVT_2 protein|retrotransposon protein, putative, Ty1-copia subclass, expressed",-1.9853998]
[null,"30.2.17","signalling.receptor kinases.DUF 26","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"30.2.19","signalling.receptor kinases.legume-lectin","Os02g0640500","Transcript","highly similar to ( 582) AT2G37710 | Symbols: RLK | RLK (receptor lectin kinase); kinase | chr2:15814934-15816961 REVERSEweakly similar to ( 196) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Lectin_legB Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_EphR PTKc_Jak_rpt2 SPS1 PTKc_EphR_A2 PTKc_Tec_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Src_like PTKc_EGFR_like PTKc_EphR_B PTKc_Csk_like PTKc_EphR_A PTKc_Syk_like PTKc_Trk PTKc_Abl PTKc_Itk PTKc_FAK PTKc_Btk_Bmx PTKc_Fes_like PTKc_Tec_Rlk PTKc_Ack_like PTKc_EphR_A10 PTKc_Lck_Blk PTKc_Fer PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_TrkB PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_InsR_like PTKc_DDR PTKc_Chk PTKc_Aatyk PTKc_Ror PTKc_Csk PTKc_c-ros PTKc_Axl_like PTK_HER3 PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Fes PTK_CCK4 PTKc_Yes PTKc_Musk PTKc_Lyn PTKc_FGFR PTKc_Met_Ron PTKc_HER4 protein|lectin receptor-type protein kinase, putative, expressed",1.3651978]
[null,"30.2.22","signalling.receptor kinases.proline extensin like","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078]
[null,"30.2.22","signalling.receptor kinases.proline extensin like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"30.2.22","signalling.receptor kinases.proline extensin like","Os03g0127700","Transcript","highly similar to ( 826) AT1G12460 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:4247703-4250444 FORWARDweakly similar to ( 196) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase Pkinase_Tyr S_TKc TyrKc S_TKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_EphR PTKc_Src_like SPS1 PTKc_Frk_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_EGFR_like PTKc_Fes_like PTKc_Musk PTKc_Tec_like PTKc_Abl PTKc_Itk PTKc_Ack_like PTKc_Ror PTKc_Hck PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like protein|leucine-rich repeat transmembrane protein kinase, putative, expressed",2.3438396]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0127700","Transcript","weakly similar to ( 119) AT4G00960 | Symbols: | protein kinase family protein | chr4:414361-416180 FORWARD protein|TKL_IRAK_DUF26-lg.1 - DUF26 kinases have homology to DUF26 containing loci, expressed",-0.977979]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os06g0551800","Transcript","moderately similar to ( 320) AT4G32300 | Symbols: SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | chr4:15599970-15602435 FORWARDmoderately similar to ( 214) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Src_like SPS1 PTKc_EGFR_like PTKc_Frk_like PTKc_Fes_like PTKc_EphR PTKc_InsR_like PTKc_Lck_Blk PTKc_ALK_LTK PTKc_Syk_like PTKc_c-ros PTKc_Itk PTKc_Srm_Brk PTKc_Tec_like PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Abl PTKc_Axl_like PTKc_Trk PTKc_Met_Ron PTKc_Csk PTKc_EphR_A2 PTKc_Lyn PTKc_Btk_Bmx PTKc_Ror PTKc_Ack_like PTKc_Aatyk PTKc_DDR PTKc_EphR_B PTKc_EphR_A PTKc_Aatyk1_Aatyk3 PTKc_Fes PTKc_Axl PTKc_Fyn_Yrk PTKc_Src PTKc_Chk PTKc_Tec_Rlk PTKc_RET PTKc_Fer PTKc_TrkB PTKc_Syk PTKc_Hck PTKc_FGFR PTKc_IGF-1R PTKc_Tie2 PTKc_TrkC PTKc_TrkA PTK_CCK4 protein|lectin protein kinase family protein, putative, expressed",-1.8291126]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0117200","Transcript","moderately similar to ( 304) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 180) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr Pkinase PTKc S_TKc S_TKc PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Tec_like PTKc_Itk SPS1 PTKc_EGFR_like PTKc_Axl_like PTKc_Csk_like PTKc_EphR_A2 PTKc_Btk_Bmx PTKc_Frk_like PTKc_EphR_B PTKc_EphR_A PTKc_InsR_like PTKc_Ack_like PTKc_Fyn_Yrk PTKc_Src PTKc_FGFR PTKc_Fes_like PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_RET PTKc_Trk PTKc_Ror PTKc_Yes PTKc_Chk PTKc_ALK_LTK PTKc_Tec_Rlk PTKc_Lck_Blk PTKc_EphR_A10 PTKc_DDR PTK_HER3 PTKc_Tie1 PTKc_c-ros PTKc_Tie2 PTKc_Aatyk PTKc_DDR_like PTKc_Csk PTKc_Axl PTKc_Zap-70 PTKc_DDR1 PTKc_DDR2 PTKc_FAK PTKc_Tie PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Lyn PTKc_Ror1 PTKc_Fer PTKc_Syk PTKc_TrkA protein|TAK33, putative, expressed",-2.0088966]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0541500","Transcript","moderately similar to ( 307) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 142) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR PTKc_Syk_like PTKc_Csk_like PTKc_Src_like PTKc_Ror SPS1 PTKc_EphR_A2 PTKc_Trk PTKc_Srm_Brk PTKc_HER4 PTKc_Met_Ron PTKc_EGFR PTKc_Axl_like PTKc_Itk PTKc_ALK_LTK PTKc_Tec_like PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EphR_A PTKc_Lck_Blk PTKc_EphR_B PTKc_Jak1_rpt2 protein|TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.3138751]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os12g0527700","Transcript","moderately similar to ( 373) AT1G34300 | Symbols: | lectin protein kinase family protein | chr1:12503450-12505939 FORWARDhighly similar to ( 638) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase S_TKc S_TKc TyrKc Pkinase_Tyr PTKc PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_Itk PTKc_EphR B_lectin B_lectin PTKc_EphR_A2 PTKc_Trk PTKc_Tec_like PTKc_Ror PTKc_Lck_Blk B_lectin PTKc_Chk PTKc_Src PTKc_Tie2 PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_InsR_like PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Fes_like PTKc_Tie1 PTKc_Ror1 PTKc_TrkA PTKc_Abl PTKc_Yes PTKc_Fes protein|S-locus-like receptor protein kinase, putative, expressed",-1.533811]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0470500","Transcript","moderately similar to ( 339) AT1G70530 | Symbols: | protein kinase family protein | chr1:26588750-26591379 REVERSEweakly similar to ( 199) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Src_like PTKc_Srm_Brk PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_EphR_A2 PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Lck_Blk PTKc_Lyn PTKc_Tec_like PTKc_Itk PTKc_Fes_like PTKc_DDR PTKc_Abl PTKc_Src PTKc_EphR_B PTKc_EphR_A PTKc_FGFR PTKc_Fyn_Yrk PTKc_Ror PTKc_Tyk2_rpt2 PTK_CCK4 PTKc_InsR_like PTKc_Musk PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Ror1 PTKc_EGFR_like PTKc_Syk_like PTKc_Yes PTKc_TrkB PTKc_Hck PTKc_TrkC PTKc_Jak1_rpt2 PTKc_Ack_like PTKc_Fer PTKc_TrkA PTKc_DDR_like PTKc_FGFR2 PTK_Ryk PTKc_FGFR4 PTKc_ALK_LTK PTKc_RET PTKc_DDR2 PTKc_DDR1 PTKc_Tec_Rlk PTKc_InsR PTKc_HER4 PTKc_Csk PTKc_FGFR3 PTKc_Ror2 PTKc_c-ros PTKc_EphR_A10 PTKc_PDGFR PTKc_Axl_like PTKc_FAK PTKc_FGFR1 PTKc_Fes PTKc_Syk PTK_HER3 PTKc_Zap-70 PTKc_Tie2 PTKc_Met_Ron protein|TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed",-2.5822263]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os03g0221700","Transcript","highly similar to ( 657) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 240) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase S_TKc Pkinase_Tyr TyrKc PTKc S_locus_glycop SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk PTKc_EphR PTKc_Frk_like PTKc_Srm_Brk PTKc_Trk B_lectin B_lectin PTKc_FGFR PTKc_EGFR_like B_lectin PTKc_Lyn PTKc_Lck_Blk PTKc_Fes_like PTKc_Ror PTKc_InsR_like PTKc_Jak2_Jak3_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_EphR_A2 PTKc_EphR_A PTKc_TrkB PTKc_Musk PTKc_Fer PTKc_ALK_LTK PTKc_Axl_like PTKc_DDR PTKc_EphR_B PTK_HER3 PTKc_TrkC PTKc_Abl PTKc_Tyk2_rpt2 PTKc_Fyn_Yrk PTKc_Syk_like PTKc_EphR_A10 PTKc_Fes PTKc_Btk_Bmx PTK_CCK4 PTKc_Src PTKc_Tec_Rlk PTKc_RET PTKc_c-ros PTKc_Chk PTKc_Yes PTKc_Csk PTKc_FGFR3 PTKc_Hck PTKc_Jak1_rpt2 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",2.5693429]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0103700","Transcript","highly similar to ( 592) AT2G19130 | Symbols: | S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARDmoderately similar to ( 306) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc Pkinase TyrKc Pkinase_Tyr PTKc S_TKc PTKc_EphR PTKc_Itk PTKc_Trk PTKc_Csk_like SPS1 PTKc_Frk_like PTKc_Tec_like PTKc_Src_like B_lectin PTKc_DDR PTKc_InsR_like PTKc_Abl B_lectin PTKc_Ror PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_FGFR PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Syk_like PTKc_EphR_A PTKc_Tec_Rlk PTKc_TrkC PTKc_TrkA PTKc_Met_Ron PTKc_ALK_LTK PTK_HER3 PTKc_DDR2 PTKc_Axl_like PTKc_Ack_like PTKc_Musk PTKc_Chk PTKc_c-ros PTKc_TrkB PAN_AP_plant PTKc_Btk_Bmx PTKc_Hck PTKc_Jak2_Jak3_rpt2 B_lectin S_locus_glycop PTKc_RET PTK_CCK4 protein|serine/threonine-protein kinase receptor precursor, putative, expressed",1.1126283]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os11g0672200","Transcript","moderately similar to ( 247) AT4G21390 | Symbols: B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding | chr4:11394458-11397474 REVERSEweakly similar to ( 171) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr S_TKc Pkinase TyrKc PTKc S_TKc PTKc_Jak_rpt2 PTKc_EphR PTKc_Csk_like SPS1 PTKc_Src_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Srm_Brk PTKc_Itk PTKc_Ror PTKc_Chk PTKc_Frk_like PTKc_Lck_Blk PTKc_EGFR_like PTKc_Lyn PTKc_Axl_like PTKc_EphR_B PTKc_Jak2_Jak3_rpt2 PTKc_InsR_like PTKc_Csk PTKc_Abl PTKc_Ror1 PTKc_Fes_like PTKc_Tec_Rlk PTKc_EphR_A2 PTK_CCK4 protein|cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed",-2.140228]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os02g0212900","Transcript","weakly similar to ( 132) AT1G61430 | Symbols: | S-locus protein kinase, putative | chr1:22664669-22667769 REVERSEvery weakly similar to (99.0) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) S_TKc S_TKc Pkinase_Tyr Pkinase PTKc TyrKc protein|cysteine-rich receptor-like protein kinase 35 precursor, putative, expressed",1.4578999]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os01g0883000","Transcript","moderately similar to ( 427) AT1G11050 | Symbols: | protein kinase family protein | chr1:3681892-3683769 FORWARDweakly similar to ( 165) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc PTKc Pkinase Pkinase_Tyr TyrKc PTKc_Trk PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Csk_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Ror PTKc_EphR PTKc_Tec_like PTKc_Fes_like PTKc_EGFR_like PTKc_Itk PTKc_Syk_like PTKc_Btk_Bmx PTKc_Src PTKc_EphR_A2 PTKc_Fyn_Yrk PTKc_Yes PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Abl PTKc_Chk PTK_CCK4 PTKc_c-ros PTKc_TrkA PTKc_Axl_like PTKc_TrkB PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_TrkC PTKc_DDR PTKc_EphR_A PTKc_Ack_like PTKc_Fer PTKc_Lck_Blk PTKc_Lyn PTKc_Musk PTKc_FGFR PTKc_Csk PTKc_EphR_B PTKc_Tie2 PTKc_Hck PTKc_Jak1_rpt2 PTKc_Met_Ron PTKc_DDR_like PTKc_DDR2 PTKc_Ror2 PTKc_Fes PTKc_DDR1 PTKc_FGFR4 PTKc_InsR_like PTK_HER3 PTKc_Tie1 PTKc_EphR_A10 PTKc_FAK protein|protein kinase family protein, putative, expressed",-1.5212613]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os04g0616700","Transcript","highly similar to ( 855) AT1G56145 | Symbols: | leucine-rich repeat family protein / protein kinase family protein | chr1:21008225-21013934 REVERSEmoderately similar to ( 209) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc PTKc S_TKc Pkinase_Tyr S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Trk PTKc_Csk_like PTKc_EphR PTKc_Itk PTKc_EGFR_like PTKc_Tec_like PTKc_Frk_like PTKc_TrkB SPS1 PTKc_Ror PTKc_TrkC PTKc_TrkA PTKc_Syk_like PTKc_DDR PTKc_InsR_like PTKc_Src PTKc_Lck_Blk PTKc_Fes_like PTKc_EphR_A2 PTKc_Yes PTKc_c-ros PTKc_Fyn_Yrk PTKc_Btk_Bmx PTK_CCK4 PTKc_Chk PTKc_Musk PTKc_EphR_A PTKc_FGFR PTKc_RET PTKc_EphR_B PTKc_Met_Ron PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Ack_like PTKc_EphR_A10 PTKc_ALK_LTK PTKc_Hck PTKc_Tec_Rlk PTKc_DDR1 PTKc_Abl PTKc_DDR_like PTKc_FAK PTKc_Aatyk PTKc_Tyk2_rpt2 PTKc_Fer PTKc_DDR2 PTKc_Ror1 PTKc_Axl_like PTKc_HER2 PTK_Ryk PTKc_EGFR PTKc_Fes PTKc_HER4 PTKc_Jak1_rpt2 PTKc_Csk PTKc_Axl PTKc_PDGFR protein|SHR5-receptor-like kinase, putative, expressed",-1.218822]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0408900","Transcript","moderately similar to ( 373) AT1G70740 | Symbols: | protein kinase family protein | chr1:26673847-26675687 REVERSEmoderately similar to ( 203) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Trk SPS1 PTKc_EphR PTKc_Csk_like PTKc_Ror PTKc_Fes_like PTKc_Srm_Brk PTKc_InsR_like PTKc_Frk_like PTKc_Syk_like PTKc_Src_like PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_Tec_like PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_TrkA PTKc_Lck_Blk PTKc_EGFR_like PTKc_Abl PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Ror2 PTKc_DDR PTKc_c-ros PTKc_Itk PTKc_FGFR3 PTKc_EphR_B PTKc_RET PTKc_PDGFR PTKc_FGFR4 PTKc_Chk PTKc_Ror1 PTKc_FGFR2 PTKc_EphR_A2 PTKc_EphR_A PTKc_Fer PTKc_Lyn PTKc_Tie2 PTKc_Src PTKc_DDR1 PTKc_Met_Ron PTKc_DDR2 PTKc_FGFR1 PTKc_Axl_like PTKc_Yes PTKc_DDR_like PTKc_FAK PTKc_InsR PTKc_Fes PTKc_Jak1_rpt2 PTKc_Tie1 protein|TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.0385976]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os09g0550500","Transcript","moderately similar to ( 217) AT1G11350 | Symbols: CBRLK1, SD1-13, RKS2 | SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase | chr1:3817725-3820752 REVERSEweakly similar to ( 184) SLSG3_BRAOL S-locus-specific glycoprotein S13 precursor (SLSG-13) (Fragment) - Brassica oleracea (Wild cabbage)B_lectin B_lectin B_lectin protein|S-locus-specific glycoprotein S13 precursor, putative, expressed",-1.4175048]
[null,"30.2.24","signalling.receptor kinases.S-locus glycoprotein like","Os07g0542400","Transcript","moderately similar to ( 445) AT4G23180 | Symbols: CRK10, RLK4 | CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr4:12138171-12140780 FORWARDweakly similar to ( 199) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc PTKc Pkinase_Tyr S_TKc Pkinase S_TKc SPS1 PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Csk_like PTKc_Ror PTKc_Src_like PTKc_InsR_like PTKc_Tec_like PTKc_Trk PTKc_EphR PTKc_c-ros PTKc_Frk_like PTKc_Syk_like PTKc_Musk PTKc_RET PTKc_ALK_LTK PTKc_Lck_Blk PTKc_FGFR PTKc_Ack_like PTKc_Abl PTKc_Jak2_Jak3_rpt2 PTKc_DDR PTKc_EGFR_like PTKc_Chk PTKc_Ror2 PTKc_Itk PTKc_Axl_like PTKc_Btk_Bmx PTKc_Ror1 PTKc_TrkB PTKc_Tec_Rlk PTKc_Lyn PTKc_TrkC PTKc_Fes_like PTKc_Axl PTKc_FGFR4 PTKc_PDGFR PTKc_Met_Ron PTK_CCK4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Jak1_rpt2 PTKc_Hck PTKc_TrkA PTKc_Tyk2_rpt2 PTKc_EphR_A2 PTKc_Tie2 PTKc_FGFR1 PTKc_EphR_A PTKc_FGFR3 PTKc_IGF-1R PTKc_DDR_like PTKc_FAK PTKc_Src PTK_HER3 PTK_Ryk PTKc_FGFR2 PTKc_Yes PTKc_InsR PTKc_Csk PTKc_DDR2 PTKc_EGFR PTKc_Tie PTKc_Syk PTKc_Tyro3 PTKc_Zap-70 PTKc_DDR1 PTKc_Tie1 PTKc_Fes PTKc_Fer PTKc_HER4 PTKc_EphR_A10 PTKc_Aatyk PTKc_VEGFR PTKc_HER2 protein|TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed",-1.1601444]
[null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os08g0378000","Transcript","very weakly similar to (82.8) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|wall-associated kinase-like 2, putative, expressed",-2.227124]
[null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os01g0364800","Transcript","weakly similar to ( 155) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARD protein|OsWAK7 - OsWAK receptor-like protein kinase, expressed",-1.7365016]
[null,"30.2.25","signalling.receptor kinases.wall associated kinase","Os10g0326100","Transcript","weakly similar to ( 129) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARD protein|OsWAK113 - OsWAK receptor-like protein OsWAK-RLP, expressed",3.3258743]
[null,"30.2.99","signalling.receptor kinases.misc","Os06g0667000","Transcript","highly similar to ( 597) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 315) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc PTKc S_TKc Pkinase_Tyr TyrKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Src_like PTKc_Srm_Brk PTKc_Trk PTKc_Csk_like COG4886 PTKc_Ror PTKc_Frk_like PTKc_EGFR_like PTKc_EphR PTKc_Itk PTKc_Abl PTKc_Tec_like PTKc_Ack_like PTKc_c-ros PTKc_Syk_like PTKc_TrkA protein|expressed protein",-1.8280029]
[null,"30.2.99","signalling.receptor kinases.misc","Os02g0193000","Transcript","moderately similar to ( 293) AT2G33580 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr2:14219848-14221842 REVERSEweakly similar to ( 139) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc SPS1 PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Chk PTKc_Src_like PTKc_EphR PTKc_Trk PTKc_Frk_like PTKc_Ack_like PTKc_Lck_Blk PTKc_Fes_like protein|LYK8, putative, expressed",-1.1901093]
[null,"30.2.99","signalling.receptor kinases.misc","Os06g0274500","Transcript","highly similar to ( 822) AT5G16000 | Symbols: NIK1 | NIK1 (NSP-INTERACTING KINASE 1); kinase | chr5:5224264-5227003 FORWARDmoderately similar to ( 273) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) TyrKc S_TKc S_TKc Pkinase_Tyr PTKc Pkinase PTKc_Src_like PTKc_Csk_like PTKc_EphR PTKc_Fes_like PTKc_Srm_Brk PTKc_Frk_like PTKc_Jak_rpt2 PTKc_Lck_Blk PTKc_EGFR_like SPS1 PTKc_Syk_like PTKc_Fer PTKc_Trk PTKc_Tec_like PTKc_Itk PTKc_Ack_like PTKc_Lyn PTKc_Met_Ron PTKc_Axl_like PTKc_Fes PTKc_EphR_A2 PTKc_Src PTKc_InsR_like PTKc_Fyn_Yrk PTKc_c-ros PTKc_Tec_Rlk PTKc_Hck PTKc_Abl PTKc_FGFR PTKc_Yes PTKc_Jak2_Jak3_rpt2 PTKc_TrkC PTKc_Tyk2_rpt2 PTKc_EphR_B PTKc_Musk PTKc_Jak1_rpt2 PTKc_RET PTKc_Ror PTKc_Chk PTKc_TrkA PTKc_Axl protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",-1.1578078]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0370900","Transcript","moderately similar to ( 391) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 163) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr TyrKc PTKc Pkinase SPS1 PTKc_Csk_like PTKc_Fes_like PTKc_Trk PTKc_RET PTKc_Ror PTKc_Fer PTKc_EphR PTKc_Jak_rpt2 PTKc_TrkA PTKc_Src_like PTKc_Frk_like PTKc_Chk PTKc_InsR_like PTKc_Fes PTKc_Itk PTKc_EGFR_like PTKc_Abl PTKc_Srm_Brk PTKc_FAK PTKc_EphR_A2 PTKc_Tie1 PTKc_ALK_LTK PTKc_Tec_like PTKc_Tie PTKc_Ack_like PTKc_Csk PTKc_FGFR PTKc_Axl_like PTKc_Btk_Bmx PTKc_IGF-1R PTKc_Tec_Rlk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Src PTKc_Met_Ron PTKc_Musk PTKc_EphR_B PTKc_Yes PTKc_Ror1 protein|OsWAK60 - OsWAK receptor-like protein kinase, expressed",-2.1680458]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0288500","Transcript","moderately similar to ( 275) AT5G10530 | Symbols: | lectin protein kinase, putative | chr5:3324978-3326933 REVERSEweakly similar to ( 153) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase S_TKc Lectin_legB Pkinase_Tyr TyrKc PTKc PTKc_Jak_rpt2 SPS1 PTKc_EphR PTKc_Ror PTKc_Srm_Brk PTKc_EphR_B PTKc_Trk PTKc_Syk_like PTKc_EGFR_like PTKc_Tyk2_rpt2 PTKc_Csk_like PTKc_EphR_A2 PTKc_Abl PTKc_Src_like PTKc_Fes_like PTKc_EphR_A PTKc_Tec_like PTKc_InsR_like PTKc_Frk_like PTKc_Itk PTKc_TrkA PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Fes PTKc_Fer PTKc_IGF-1R PTKc_Btk_Bmx PTKc_Ror2 PTKc_TrkC PTKc_Zap-70 PTKc_DDR PTK_Jak2_Jak3_rpt1 PTKc_FAK protein|protein kinase, putative, expressed",-2.1872857]
[null,"30.2.99","signalling.receptor kinases.misc","Os02g0154200","Transcript","highly similar to ( 761) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 635) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc Pkinase PTKc S_TKc S_TKc PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_EphR PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EGFR_like PTKc_InsR_like PTKc_Tec_like PTKc_Yes SPS1 PTKc_TrkA PTKc_EphR_A2 PTKc_Syk_like PTKc_Lyn PTKc_Src PTKc_Lck_Blk PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Fyn_Yrk PTKc_Csk PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Hck PTKc_FGFR PTKc_Musk PTKc_TrkB PTKc_Axl_like PTKc_EphR_A PTKc_Ror PTKc_EphR_B PTKc_Tec_Rlk PTK_CCK4 PTKc_Btk_Bmx PTKc_DDR PTKc_Chk PTKc_Ack_like PTKc_c-ros PTKc_IGF-1R PTKc_Met_Ron PTKc_RET PTKc_ALK_LTK PTKc_Tie1 PTKc_Tie2 PTKc_Tie PTKc_InsR protein|phytosulfokine receptor precursor, putative, expressed",1.4195126]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0371200","Transcript","moderately similar to ( 256) AT1G16150 | Symbols: WAKL4 | WAKL4 (WALL ASSOCIATED KINASE-LIKE 4); kinase | chr1:5532415-5534877 FORWARDweakly similar to ( 169) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc S_TKc PTKc S_TKc Pkinase PTKc_Jak_rpt2 SPS1 PTKc_Csk_like PTKc_Trk PTKc_EphR PTKc_Chk PTKc_Fes_like PTKc_EGFR_like PTKc_Frk_like PTKc_Met_Ron PTKc_TrkB PTKc_Fes PTKc_Src_like PTKc_Syk_like PTKc_Tec_like PTKc_InsR_like PTKc_TrkA PTKc_Srm_Brk PTKc_EphR_A2 PTKc_Fer PTKc_Ack_like PTKc_Itk PTKc_EphR_B PTKc_Ror PTKc_Abl PTKc_FAK PTKc_TrkC PTKc_ALK_LTK PTKc_Btk_Bmx PTKc_Musk PTKc_Axl_like protein|protein kinase domain containing protein, expressed",-1.3237983]
[null,"30.2.99","signalling.receptor kinases.misc","Os01g0690800","Transcript","moderately similar to ( 405) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 192) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase Pkinase_Tyr PTKc S_TKc S_TKc PTKc_Csk_like PTKc_EphR PTKc_Src_like PTKc_Tec_like PTKc_EGFR_like PTKc_Srm_Brk PTKc_Lck_Blk PTKc_Jak_rpt2 PTKc_Itk PTKc_Trk PTKc_Abl PTKc_Frk_like PTKc_FGFR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Syk_like PTKc_Ror PTKc_Ack_like PTKc_Fyn_Yrk PTKc_ALK_LTK PTKc_Chk PTKc_Lyn PTKc_Axl_like PTKc_Src PTKc_DDR PTKc_EphR_A2 PTKc_Met_Ron PTKc_PDGFR PTKc_Jak2_Jak3_rpt2 PTKc_FGFR4 PTKc_Tie2 PTKc_Yes PTKc_c-ros PTKc_Fer PTKc_EphR_B PTKc_FGFR3 PTKc_InsR PTKc_HER4 PTKc_EphR_A10 PTKc_Hck PTKc_FGFR2 PTKc_DDR_like PTKc_Csk PTKc_EphR_A PTKc_Ror2 PTKc_Tie1 PTKc_EGFR PTKc_HER2 PTKc_RET PTKc_DDR2 PTK_HER3 PTKc_FGFR1 PTKc_FAK PTKc_Jak1_rpt2 PTKc_Fes PTKc_Axl PTKc_Ror1 PTKc_IGF-1R PTKc_DDR1 PTKc_Tie PTKc_Tyro3 PTKc_Tyk2_rpt2 protein|Protein kinase domain containing protein, expressed",-1.2190024]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0599000","Transcript","moderately similar to ( 490) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDmoderately similar to ( 208) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc S_TKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Itk SPS1 PTKc_Tec_like PTKc_Fes_like PTKc_Src_like PTKc_EGFR_like PTKc_Frk_like PTKc_EphR PTKc_Srm_Brk PTKc_Fer PTKc_InsR_like PTKc_Axl_like PTKc_Trk PTKc_DDR PTKc_Tec_Rlk PTKc_Syk_like PTKc_Abl PTKc_Ack_like PTKc_Btk_Bmx PTKc_Jak2_Jak3_rpt2 PTKc_FAK PTKc_Src PTK_CCK4 PTKc_c-ros PTKc_EphR_A2 PTKc_Lck_Blk PTKc_Fes PTKc_EphR_B PTKc_Tie1 PTKc_IGF-1R PTKc_ALK_LTK PTKc_TrkA PTKc_Axl PTKc_Chk PTKc_PDGFR PTKc_Ror PTKc_RET PTKc_Lyn PTKc_Fyn_Yrk PTKc_EphR_A PTKc_Tie PTKc_Csk PTKc_FGFR PTKc_TrkB PTKc_Musk PTK_HER3 PTKc_Tie2 PTKc_Tyk2_rpt2 PTKc_DDR2 PTKc_HER4 PTKc_DDR_like PTKc_InsR PTKc_Tyro3 PTKc_TrkC PTKc_Yes PTK_Ryk PTKc_Aatyk PTKc_Ror1 PTKc_Zap-70 PTKc_HER2 PTKc_EGFR PTKc_DDR1 PTKc_Hck PTKc_Syk PTKc_FGFR1 protein|OsWAK53b - OsWAK receptor-like protein kinase, expressed",-1.2069334]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0127500","Transcript","moderately similar to ( 381) AT1G21230 | Symbols: WAK5 | WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | chr1:7429980-7432346 FORWARDweakly similar to ( 174) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc TyrKc Pkinase_Tyr S_TKc PTKc Pkinase PTKc_Met_Ron PTKc_Trk SPS1 PTKc_Csk_like PTKc_Frk_like PTKc_Itk PTKc_Fes_like PTKc_Tec_like PTKc_Btk_Bmx PTKc_Syk_like PTKc_Srm_Brk PTKc_Jak_rpt2 PTKc_Src_like PTKc_EphR PTKc_Axl_like PTKc_InsR_like PTKc_Lck_Blk PTKc_Fer PTKc_Ack_like PTKc_Tec_Rlk PTKc_Abl PTKc_Ror PTKc_DDR PTKc_Src PTKc_EGFR_like PTKc_FAK PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Lyn PTKc_TrkA PTKc_FGFR PTKc_Tyro3 PTKc_c-ros PTKc_PDGFR PTKc_Fyn_Yrk PTKc_Chk PTKc_TrkB PTKc_EphR_A PTKc_Zap-70 PTKc_DDR_like PTKc_Syk PTKc_Yes PTKc_Hck PTKc_Fes PTKc_Ror1 PTKc_RET PTKc_DDR2 PTKc_Axl PTKc_TrkC PTKc_Csk PTKc_Musk PTKc_EphR_B PTKc_Tyk2_rpt2 protein|OsWAK29 - OsWAK receptor-like protein kinase, expressed",-2.4608722]
[null,"30.2.99","signalling.receptor kinases.misc","Os01g0694000","Transcript","moderately similar to ( 305) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 211) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_Srm_Brk PTKc_Src_like PTKc_Jak_rpt2 PTKc_Trk PTKc_Csk_like PTKc_Frk_like PTKc_Fes_like PTKc_Fer PTKc_EGFR_like SPS1 PTKc_TrkA PTKc_Lck_Blk PTKc_Src PTKc_Chk PTKc_Tec_like PTKc_InsR_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_Abl PTKc_Syk_like PTKc_TrkC PTKc_EphR PTKc_Ror PTKc_DDR PTKc_Fyn_Yrk PTKc_Hck PTKc_EphR_A2 PTKc_Itk PTKc_Musk PTKc_Tyk2_rpt2 PTKc_Btk_Bmx PTKc_Yes PTKc_c-ros PTKc_EphR_B PTK_CCK4 PTKc_Tie1 PTKc_EphR_A PTKc_TrkB PTKc_Jak2_Jak3_rpt2 PTKc_FGFR PTK_HER3 PTKc_Csk PTKc_Zap-70 PTKc_Tec_Rlk PTKc_Axl PTKc_Fes PTKc_Tie PTKc_HER4 PTKc_Ror2 PTKc_Syk PTKc_Tie2 protein|expressed protein",-1.5088626]
[null,"30.2.99","signalling.receptor kinases.misc","Os06g0130100","Transcript","nearly identical (1240) AT5G62230 | Symbols: ERL1 | ERL1 (ERECTA-LIKE 1); kinase | chr5:24996433-25002130 FORWARDmoderately similar to ( 332) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) S_TKc S_TKc Pkinase_Tyr Pkinase TyrKc PTKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Trk SPS1 PTKc_Src_like PTKc_Itk PTKc_Srm_Brk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Frk_like PTKc_EphR PTKc_EphR_A2 PTKc_Lck_Blk PTK_CCK4 PTKc_Tec_like PTKc_Yes PTKc_Ror PTKc_Src PTKc_Csk PTKc_Abl PTKc_Fyn_Yrk PTKc_TrkB PTKc_Tec_Rlk PTKc_Ack_like PTKc_Chk PTKc_EphR_A PTKc_TrkC PTKc_EGFR_like PTKc_Met_Ron PTKc_Tyk2_rpt2 PTKc_EphR_B protein|receptor-like protein kinase 5 precursor, putative, expressed",2.4381118]
[null,"30.2.99","signalling.receptor kinases.misc","Os12g0210400","Transcript","highly similar to ( 818) AT1G79620 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:29957633-29962174 REVERSEmoderately similar to ( 233) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) TyrKc Pkinase_Tyr PTKc S_TKc S_TKc Pkinase PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Itk PTKc_Jak2_Jak3_rpt2 PTKc_Fes_like PTKc_Src_like PTKc_Ror PTKc_EphR PTKc_Srm_Brk PTKc_Trk PTKc_Tec_like PTKc_Frk_like PTKc_Btk_Bmx PTKc_Ack_like SPS1 PTKc_EGFR_like PTKc_Syk_like PTKc_EphR_A2 PTKc_Chk PTKc_Jak1_rpt2 PTKc_Src PTKc_c-ros PTKc_Met_Ron PTKc_TrkB PTKc_Lck_Blk PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_RET PTKc_Tec_Rlk PTKc_Tie PTKc_Tie2 PTKc_Tie1 PTKc_TrkC PTK_CCK4 PTKc_Fyn_Yrk PTKc_Fer PTKc_Yes PTKc_EphR_A PTKc_TrkA PTKc_Abl PTKc_Ror1 PTKc_InsR_like PTKc_EphR_B PTKc_Lyn PTKc_Musk PTKc_ALK_LTK PTKc_Csk PTKc_Fes PTKc_HER2 PTK_HER3 PTKc_DDR PTKc_Zap-70 PTKc_EGFR PTKc_Axl_like PTKc_Syk PTKc_Hck PTKc_FGFR2 PTKc_HER4 PTKc_FGFR1 PTKc_FAK PTKc_FGFR3 PTKc_FGFR4 PTKc_Ror2 protein|leucine-rich repeat family protein, putative, expressed",-1.025217]
[null,"30.2.99","signalling.receptor kinases.misc","Os01g0114300","Transcript","moderately similar to ( 327) AT5G38280 | Symbols: PR5K | PR5K; kinase/ transmembrane receptor protein serine/threonine kinase | chr5:15293325-15295838 REVERSEweakly similar to ( 200) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) Pkinase_Tyr TyrKc PTKc Pkinase S_TKc S_TKc PTKc_EGFR_like PTKc_Csk_like PTKc_Src_like PTKc_Syk_like PTKc_Abl PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Frk_like PTKc_EphR SPS1 PTK_HER3 PTKc_Tec_like PTKc_Itk PTKc_Trk PTKc_HER4 PTKc_InsR_like PTKc_Ror PTKc_FGFR PTKc_Fes_like PTKc_Axl_like PTKc_Lyn PTKc_Ack_like PTKc_EphR_A2 PTKc_EGFR PTKc_Lck_Blk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_ALK_LTK PTKc_EphR_A10 PTKc_Hck PTKc_c-ros PTKc_Btk_Bmx PTKc_Fyn_Yrk PTKc_EphR_A PTKc_HER2 PTKc_EphR_B PTKc_Yes PTKc_IGF-1R PTKc_Csk PTKc_Axl PTKc_Fer PTK_CCK4 PTKc_RET PTKc_Src PTKc_InsR PTKc_DDR PTKc_Tyk2_rpt2 PTKc_Met_Ron PTKc_Tie2 PTKc_PDGFR PTKc_Ror2 PTKc_Fes PTKc_Aatyk PTKc_FAK PTKc_Jak1_rpt2 PTKc_Musk PTKc_FGFR2 PTKc_Ror1 PTKc_Tie1 PTKc_FGFR1 PTKc_DDR_like PTKc_Syk PTKc_FGFR4 PTKc_TrkC PTKc_Aatyk1_Aatyk3 PTKc_TrkA PTKc_TrkB PTKc_FGFR3 PTKc_Tyro3 protein|protein kinase domain containing protein, expressed",-1.5384606]
[null,"30.2.99","signalling.receptor kinases.misc","Os01g0171000","Transcript","highly similar to ( 848) AT1G60800 | Symbols: NIK3 | NIK3 (NSP-INTERACTING KINASE 3); kinase | chr1:22383601-22386931 REVERSEmoderately similar to ( 270) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) TyrKc PTKc Pkinase_Tyr S_TKc S_TKc Pkinase PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_EphR PTKc_Fes_like PTKc_InsR_like SPS1 PTKc_EGFR_like PTKc_Abl PTKc_Src_like PTKc_Tec_like PTKc_Syk_like PTKc_Fer PTKc_Met_Ron PTKc_Frk_like PTKc_Trk PTKc_InsR PTKc_Tie2 PTKc_FGFR PTKc_Itk PTKc_Lyn PTKc_EphR_A2 PTKc_Ack_like PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_Ror PTKc_Fes PTKc_Axl_like PTKc_DDR PTKc_c-ros PTKc_RET PTKc_Chk PTKc_Tyk2_rpt2 PTKc_Tie1 PTKc_Tie PTKc_Btk_Bmx PTKc_ALK_LTK PTKc_TrkC PTKc_IGF-1R PTKc_Csk PTKc_Ror1 PTKc_EGFR PTKc_Musk protein|BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed",1.0357467]
[null,"30.2.99","signalling.receptor kinases.misc","Os07g0494300","Transcript","moderately similar to ( 220) AT1G21270 | Symbols: WAK2 | WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | chr1:7444997-7447345 FORWARDweakly similar to ( 159) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) S_TKc Pkinase_Tyr S_TKc Pkinase PTKc TyrKc PTKc_Jak_rpt2 PTKc_Fes_like PTKc_Itk PTKc_Src_like PTKc_Csk_like PTKc_Tec_like SPS1 PTKc_Trk PTKc_Srm_Brk PTKc_Syk_like PTKc_Frk_like PTKc_Abl PTKc_Chk PTKc_Btk_Bmx PTKc_Tec_Rlk PTKc_Fer PTKc_Ror PTKc_Fes PTKc_EGFR_like PTKc_Ack_like PTKc_Csk PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lck_Blk PTKc_InsR_like PTKc_ALK_LTK PTKc_Fyn_Yrk PTKc_Musk protein|OsWAK70 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed",2.8939917]
[null,"30.2.99","signalling.receptor kinases.misc","Os09g0355400","Transcript","moderately similar to ( 323) AT4G29990 | Symbols: | light repressible receptor protein kinase | chr4:14665802-14669438 REVERSEmoderately similar to ( 249) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) Pkinase_Tyr TyrKc PTKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Trk PTKc_Frk_like PTKc_Csk_like PTKc_Fes_like PTKc_EphR PTKc_Src PTKc_InsR_like PTKc_Jak_rpt2 PTKc_TrkA PTKc_Tec_like PTKc_Itk PTKc_Lck_Blk PTKc_Syk_like PTKc_Lyn PTKc_Ror PTKc_Yes PTKc_Fyn_Yrk PTKc_Srm_Brk PTKc_Btk_Bmx SPS1 PTKc_Ack_like PTKc_FGFR PTKc_TrkB PTKc_TrkC PTKc_Fer PTKc_Tie2 PTKc_DDR PTKc_Tie1 PTKc_Fes PTK_CCK4 PTKc_ALK_LTK PTKc_PDGFR PTKc_Hck PTKc_c-ros PTKc_Musk PTKc_Chk PTKc_Jak2_Jak3_rpt2 PTKc_Tie PTKc_Tec_Rlk PTKc_Csk PTKc_Abl PTKc_EphR_A2 PTKc_DDR1 PTKc_DDR_like PTKc_EGFR_like PTKc_Axl_like PTKc_DDR2 PTKc_EphR_A PTKc_FGFR1 PTKc_Jak1_rpt2 PTKc_Tyk2_rpt2 PTKc_Aatyk PTKc_EphR_B PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_RET PTKc_Zap-70 PTKc_Ror1 PTKc_IGF-1R protein|protein kinase domain containing protein, expressed",-1.3259019]
[null,"30.2.99","signalling.receptor kinases.misc","Os11g0625900","Transcript","highly similar to ( 520) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 372) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) Pkinase S_TKc S_TKc Pkinase_Tyr TyrKc PTKc PTKc_Csk_like PTKc_Jak_rpt2 PTKc_Srm_Brk PTKc_Src_like PTKc_Axl_like protein|receptor-like protein kinase precursor, putative, expressed",-3.2918835]
[null,"30.2.99","signalling.receptor kinases.misc","Os07g0501800","Transcript","highly similar to ( 779) AT1G28340 | Symbols: AtRLP4 | AtRLP4 (Receptor Like Protein 4); protein binding | chr1:9940175-9943252 FORWARDvery weakly similar to (94.0) NORK_PEA Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) protein|leucine-rich repeat family protein, putative, expressed",3.2734687]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0430400","Transcript","moderately similar to ( 332) AT3G19300 | Symbols: | protein kinase family protein | chr3:6690242-6693210 REVERSEweakly similar to ( 166) CRI4_MAIZE Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase S_TKc PTKc Pkinase_Tyr S_TKc PTKc_Srm_Brk SPS1 PTKc_Csk_like PTKc_Src_like PTKc_EphR PTKc_Fes_like PTKc_Abl PTKc_Itk PTKc_Frk_like PTKc_Trk PTKc_Chk protein|receptor-like kinase, putative, expressed",2.069229]
[null,"30.2.99","signalling.receptor kinases.misc","Os09g0353200","Transcript","moderately similar to ( 498) AT1G51860 | Symbols: | leucine-rich repeat protein kinase, putative | chr1:19257634-19261479 REVERSEmoderately similar to ( 211) NORK_MEDTR Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) Pkinase_Tyr PTKc TyrKc S_TKc S_TKc Pkinase PTKc_Src_like PTKc_Fes_like PTKc_Jak_rpt2 PTKc_Tec_like PTKc_Csk_like PTKc_Frk_like PTKc_Trk PTKc_Itk PTKc_Srm_Brk PTKc_Btk_Bmx PTKc_Src PTKc_Fer PTKc_Ror SPS1 PTKc_Lck_Blk PTKc_Abl PTKc_Tie1 PTKc_Fyn_Yrk PTKc_Yes PTKc_EphR PTKc_Syk_like PTKc_Lyn PTKc_c-ros PTKc_EGFR_like PTKc_Tie PTKc_InsR_like PTKc_Tec_Rlk PTKc_Jak2_Jak3_rpt2 PTKc_Ack_like PTKc_Csk PTKc_Tie2 PTKc_Chk PTKc_Fes PTKc_TrkB PTKc_DDR PTKc_Musk PTKc_Axl_like PTKc_TrkA PTKc_TrkC PTKc_FGFR PTKc_Tyk2_rpt2 PTKc_Ror1 PTKc_DDR_like PTKc_ALK_LTK PTKc_Hck PTKc_Met_Ron PTKc_DDR2 PTKc_DDR1 PTKc_EphR_A2 PTK_Ryk PTK_CCK4 PTKc_RET PTKc_EphR_A PTKc_FAK PTKc_EphR_A10 PTKc_PDGFR PTKc_Aatyk PTKc_Jak1_rpt2 PTKc_FGFR1 PTKc_Tyro3 PTKc_FGFR4 PTKc_FGFR3 PTKc_Ror2 PTKc_IGF-1R PTK_HER3 PTKc_EphR_B PTKc_FGFR2 PTKc_Zap-70 protein|expressed protein",-1.3962272]
[null,"30.2.99","signalling.receptor kinases.misc","Os04g0672100","Transcript","highly similar to ( 923) AT2G02220 | Symbols: ATPSKR1, PSKR1 | PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase | chr2:584098-587124 REVERSEhighly similar to ( 904) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase Pkinase_Tyr TyrKc S_TKc S_TKc PTKc PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Csk_like PTKc_Src_like PTKc_Jak_rpt2 PTKc_EGFR_like PTKc_InsR_like PTKc_Frk_like PTKc_Trk PTKc_EphR_A2 PTKc_EphR_B PTKc_Lck_Blk PTKc_TrkC PTKc_TrkA PTKc_Itk PTKc_Musk PTKc_Tec_like PTKc_TrkB PTKc_EphR_A PTKc_Syk_like PTKc_Ror PTKc_Met_Ron PTKc_Csk PTKc_Axl_like PTKc_Src PTKc_Jak2_Jak3_rpt2 PTKc_Lyn PTKc_Fyn_Yrk PTKc_Hck PTKc_Btk_Bmx PTKc_Chk PTKc_Yes PTKc_Fes_like PTKc_FGFR PTKc_ALK_LTK PTKc_Tyk2_rpt2 PTKc_Tec_Rlk PTKc_DDR PTKc_Tie2 PTKc_Ack_like PTKc_c-ros protein|phytosulfokine receptor precursor, putative, expressed",-1.2613779]
[null,"30.2.99","signalling.receptor kinases.misc","Os06g0692300","Transcript","highly similar to ( 834) AT1G72300 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr1:27217679-27220966 REVERSEhighly similar to ( 694) PSKR_DAUCA Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) Pkinase S_TKc Pkinase_Tyr S_TKc PTKc TyrKc PTKc_Jak_rpt2 SPS1 PTKc_Srm_Brk PTKc_Src_like PTKc_Tec_like PTKc_Trk PTKc_Csk_like PTKc_EGFR_like PTKc_Frk_like PTKc_Musk PTKc_TrkA PTKc_TrkC PTKc_Jak2_Jak3_rpt2 PTKc_Tec_Rlk PTKc_TrkB PTKc_Btk_Bmx PTKc_EphR PTKc_Itk PTKc_Ror PTKc_Lyn PTKc_Lck_Blk PTKc_ALK_LTK PTKc_EphR_A2 PTKc_Chk PTKc_FGFR PTKc_InsR_like PTKc_Abl PTKc_Hck PTKc_PDGFR PTKc_Fes_like PTKc_Aatyk PTKc_Csk PTKc_Met_Ron PTKc_c-ros PTKc_DDR PTKc_Yes protein|serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed",1.567398]
[null,"30.2.99","signalling.receptor kinases.misc","Os01g0113200","Transcript","moderately similar to ( 327) AT5G38260 | Symbols: | serine/threonine protein kinase, putative | chr5:15283692-15285837 REVERSEweakly similar to ( 196) KPRO_MAIZE Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) TyrKc Pkinase_Tyr PTKc S_TKc Pkinase S_TKc PTKc_Abl PTKc_Src_like PTKc_Csk_like PTKc_EGFR_like PTKc_Jak_rpt2 PTKc_EphR SPS1 PTKc_Srm_Brk PTKc_Syk_like PTKc_FGFR PTKc_Tec_like PTKc_Frk_like PTKc_Itk PTKc_InsR_like PTKc_Trk PTKc_Ror PTK_HER3 PTKc_Axl_like PTKc_Fes_like PTKc_Hck PTKc_Lck_Blk PTKc_Jak2_Jak3_rpt2 PTKc_Chk PTKc_Lyn PTKc_Tec_Rlk PTKc_EphR_A2 PTKc_Csk PTKc_Btk_Bmx PTKc_HER4 PTKc_Fyn_Yrk PTKc_EphR_B PTKc_Ack_like PTKc_c-ros PTKc_InsR PTKc_ALK_LTK PTKc_Fer PTK_CCK4 PTKc_EphR_A10 PTKc_Src PTKc_EphR_A PTKc_EGFR PTKc_Yes PTKc_Met_Ron PTKc_PDGFR PTKc_IGF-1R PTKc_Axl PTKc_HER2 PTKc_Aatyk PTKc_RET PTKc_Ror2 PTKc_FGFR3 PTKc_FGFR4 PTKc_FGFR2 PTKc_Tie2 PTKc_Zap-70 PTKc_Tyk2_rpt2 PTKc_Syk PTKc_Tie1 PTKc_DDR_like PTKc_FGFR1 PTKc_FAK PTKc_Aatyk1_Aatyk3 PTKc_DDR PTKc_Tie PTKc_Ror1 PTKc_Jak1_rpt2 PTKc_Fes PTKc_Musk protein|Ser/Thr receptor-like kinase, putative, expressed",1.2218553]
[null,"30.2.99","signalling.receptor kinases.misc","Os06g0588800","Transcript","highly similar to ( 601) AT3G47570 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17527611-17530748 FORWARDmoderately similar to ( 458) RPK1_IPONI Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) PTKc Pkinase_Tyr S_TKc S_TKc Pkinase TyrKc PTKc_Jak_rpt2 PTKc_Csk_like PTKc_Srm_Brk PTKc_Trk PTKc_InsR_like PTKc_Met_Ron PTKc_Src_like PTKc_Tec_like PTKc_Axl_like PTKc_Fes_like PTKc_Syk_like PTKc_EphR PTKc_Frk_like PTKc_Btk_Bmx PTKc_TrkA PTK_Ryk SPS1 PTKc_Chk PTKc_TrkC PTKc_Abl PTKc_FGFR PTK_CCK4 PTKc_c-ros PTKc_Itk PTKc_Csk PTKc_TrkB PTKc_ALK_LTK PTKc_Ror PTKc_Tie1 protein|leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed",-2.0589373]
[null,30.3,"signalling.calcium","Os01g0279300","Transcript","moderately similar to ( 245) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 243) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam3 - Calmodulin, expressed",-1.3882551]
[null,30.3,"signalling.calcium","Os01g0955500","Transcript","very weakly similar to (85.5) AT3G50770 | Symbols: | calmodulin-related protein, putative | chr3:18873987-18874604 FORWARD protein|OsCML19 - Calmodulin-related calcium sensor protein, expressed",-1.8308636]
[null,30.3,"signalling.calcium","Os01g0896200","Transcript","weakly similar to ( 140) AT3G59690 | Symbols: IQD13 | IQD13 (IQ-domain 13); calmodulin binding | chr3:22049572-22051479 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",3.0610015]
[null,30.3,"signalling.calcium","Os08g0300200","Transcript","highly similar to ( 598) AT1G05500 | Symbols: SYTE, ATSYTE, NTMC2TYPE2.1, NTMC2T2.1 | NTMC2T2.1 | chr1:1625098-1628940 FORWARD COG5038 C2 C2 C2_1 C2 protein|expressed protein",1.4960216]
[null,30.3,"signalling.calcium","Os03g0130500","Transcript","moderately similar to ( 395) AT1G20760 | Symbols: | calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD EH EH protein|EF hand family protein, putative, expressed",-1.0064472]
[null,30.3,"signalling.calcium","Os02g0158100","Transcript","highly similar to ( 872) AT3G20290 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding | chr3:7075057-7078655 REVERSE Dynamin_N protein|EH domain-containing protein 1, putative, expressed",2.9534626]
[null,30.3,"signalling.calcium","Os01g0194200","Transcript","weakly similar to ( 197) AT2G26180 | Symbols: IQD6 | IQD6 (IQ-domain 6); calmodulin binding | chr2:11143433-11144982 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.2940699]
[null,30.3,"signalling.calcium","Os02g0247800","Transcript","highly similar to ( 508) AT1G53210 | Symbols: | sodium/calcium exchanger family protein / calcium-binding EF hand family protein | chr1:19844790-19847533 FORWARD protein|calcium-binding EF hand family protein, putative, expressed",-1.1376272]
[null,30.3,"signalling.calcium","Os03g0808600","Transcript","highly similar to ( 691) AT5G12480 | Symbols: CPK7 | CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:4047817-4050035 REVERSEmoderately similar to ( 478) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc FRQ1 protein|CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-0.9945205]
[null,30.3,"signalling.calcium","Os10g0539600","Transcript","highly similar to ( 721) AT2G17290 | Symbols: CPK6, ATCDPK3 | CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr2:7517005-7519239 FORWARDnearly identical (1090) CDPK1_ORYSA Calcium-dependent protein kinase, isoform 1 (EC 2.7.11.1) (CDPK 1) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 TyrKc Pkinase_Tyr PTKc PTKc_Jak_rpt2 FRQ1 protein|CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",3.3820488]
[null,30.3,"signalling.calcium","Os10g0471400","Transcript","highly similar to ( 655) AT4G28600 | Symbols: NPGR2 | NPGR2 (no pollen germination related 2); calmodulin binding | chr4:14130046-14132599 FORWARD protein|tetratricopeptide repeat domain containing protein, expressed",2.6239593]
[null,30.3,"signalling.calcium","Os01g0833800","Transcript","weakly similar to ( 150) AT5G03040 | Symbols: iqd2 | iqd2 (IQ-domain 2); calmodulin binding | chr5:710380-712406 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",-0.994442]
[null,30.3,"signalling.calcium","Os05g0105600","Transcript","moderately similar to ( 249) AT1G79270 | Symbols: ECT8 | ECT8 (evolutionarily conserved C-terminal region 8) | chr1:29816157-29818811 FORWARD YTH protein|ECT protein, putative, expressed",1.3894128]
[null,30.3,"signalling.calcium","Os01g0716200","Transcript","weakly similar to ( 186) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",3.9512074]
[null,30.3,"signalling.calcium","Os12g0619000","Transcript","weakly similar to ( 165) AT3G22190 | Symbols: IQD5 | IQD5 (IQ-domain 5); calmodulin binding | chr3:7831280-7833512 REVERSE protein|IQ calmodulin-binding motif domain containing protein, expressed",1.3225497]
[null,30.3,"signalling.calcium","Os07g0170300","Transcript","moderately similar to ( 300) AT5G61020 | Symbols: ECT3 | ECT3 | chr5:24557485-24559780 REVERSE YTH protein|YT521-B, putative, expressed",-1.0645069]
[null,30.3,"signalling.calcium","Os03g0748000","Transcript","moderately similar to ( 389) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.1706415]
[null,30.3,"signalling.calcium","Os01g0950700","Transcript","very weakly similar to (97.1) AT2G38800 | Symbols: | calmodulin-binding protein-related | chr2:16216999-16218837 FORWARDCaM_binding protein|expressed protein",-2.1979692]
[null,30.3,"signalling.calcium","Os03g0158500","Transcript","moderately similar to ( 359) AT3G13460 | Symbols: ECT2 | ECT2; protein binding | chr3:4385274-4388220 REVERSE YTH protein|YT521-B-like family domain containing protein, expressed",-1.2037576]
[null,30.3,"signalling.calcium","Os04g0402100","Transcript","highly similar to ( 566) AT5G61790 | Symbols: CNX1, ATCNX1 | calnexin 1 (CNX1) | chr5:24827394-24829642 REVERSEhighly similar to ( 574) CALX_SOYBN Calnexin homolog precursor - Glycine max (Soybean) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.3851147]
[null,30.3,"signalling.calcium","Os12g0556200","Transcript","moderately similar to ( 210) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-1.329944]
[null,30.3,"signalling.calcium","Os07g0568600","Transcript","highly similar to ( 805) AT5G19450 | Symbols: CDPK19, CPK8 | CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | chr5:6558672-6561471 REVERSEhighly similar to ( 516) CDPK2_ORYSA Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) S_TKc S_TKc Pkinase SPS1 Pkinase_Tyr TyrKc PTKc FRQ1 protein|CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed",-1.2445259]
[null,30.3,"signalling.calcium","Os05g0197300","Transcript","moderately similar to ( 401) AT2G26190 | Symbols: | calmodulin-binding family protein | chr2:11147901-11150082 REVERSE protein|calmodulin-binding protein, putative, expressed",-1.891696]
[null,30.3,"signalling.calcium","Os03g0807400","Transcript","highly similar to ( 612) AT1G19720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:6819926-6822610 REVERSEmoderately similar to ( 325) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin family protein, expressed",1.2865318]
[null,30.3,"signalling.calcium","Os01g0329800","Transcript","moderately similar to ( 250) AT1G48110 | Symbols: ECT7 | ECT7 (evolutionarily conserved C-terminal region 7) | chr1:17770339-17772806 REVERSE YTH protein|ECT protein, putative, expressed",-0.9762449]
[null,30.3,"signalling.calcium","Os12g0603800","Transcript","weakly similar to ( 160) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDweakly similar to ( 160) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCML5 - Calmodulin-related calcium sensor protein, expressed",-1.6109797]
[null,30.3,"signalling.calcium","Os11g0668300","Transcript","weakly similar to ( 133) AT5G57580 | Symbols: | calmodulin-binding protein | chr5:23314994-23317683 REVERSECalmodulin_bind protein|calmodulin binding protein, putative, expressed",-3.3038952]
[null,30.3,"signalling.calcium","Os08g0115200","Transcript","moderately similar to ( 252) AT4G00820 | Symbols: iqd17 | iqd17 (IQ-domain 17); calmodulin binding | chr4:349300-351307 FORWARD protein|IQ calmodulin-binding motif domain containing protein, expressed",1.5523863]
[null,30.3,"signalling.calcium","Os04g0569900","Transcript","weakly similar to ( 106) AT4G23060 | Symbols: IQD22 | IQD22 (IQ-domain 22); calmodulin binding | chr4:12087283-12090408 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",2.0508223]
[null,30.3,"signalling.calcium","Os01g0955100","Transcript","weakly similar to ( 114) AT1G76650 | Symbols: CML38 | calcium-binding EF hand family protein | chr1:28766909-28767442 REVERSE protein|OsCML31 - Calmodulin-related calcium sensor protein, expressed",-1.1783794]
[null,30.3,"signalling.calcium","Os01g0267900","Transcript","moderately similar to ( 248) AT2G27030 | Symbols: CAM5 | CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532719-11533060 FORWARDmoderately similar to ( 246) CALM3_PETHY Calmodulin-related protein - Petunia hybrida (Petunia) FRQ1 protein|OsCam1-3 - Calmodulin, expressed",-0.9781513]
[null,30.3,"signalling.calcium","Os03g0161400","Transcript","weakly similar to ( 140) AT4G14750 | Symbols: IQD19 | IQD19 (IQ-domain 19); calmodulin binding | chr4:8470449-8471903 FORWARD protein|IQ calmodulin-binding motif family protein, putative, expressed",3.2118518]
[null,30.3,"signalling.calcium","Os05g0535900","Transcript","weakly similar to ( 190) AT1G74690 | Symbols: IQD31 | IQD31 (IQ-domain 31); calmodulin binding | chr1:28061498-28063924 REVERSE protein|IQ calmodulin-binding motif family protein, putative, expressed",1.9528507]
[null,30.3,"signalling.calcium","Os07g0246200","Transcript","highly similar to ( 512) AT1G09210 | Symbols: | calreticulin 2 (CRT2) | chr1:2973217-2976655 REVERSEhighly similar to ( 603) CALR_ORYSA Calreticulin precursor - Oryza sativa (Rice) Calreticulin protein|calreticulin precursor protein, putative, expressed",-1.0358893]
[null,30.4,"signalling.phosphinositides","Os02g0782600","Transcript","highly similar to ( 627) AT3G43220 | Symbols: | phosphoinositide phosphatase family protein | chr3:15197453-15202653 REVERSE Syja_N COG5329 protein|SAC domain containing protein, putative, expressed",-1.3563666]
[null,30.4,"signalling.phosphinositides","Os11g0309000","Transcript","highly similar to ( 791) AT3G51460 | Symbols: RHD4 | RHD4 (ROOT HAIR DEFECTIVE4); phosphatidylinositol-4,5-bisphosphate 5-phosphatase/ phosphatidylinositol-4-phosphate phosphatase | chr3:19093007-19097142 FORWARD COG5329 Syja_N protein|SacI homology domain containing protein, expressed",1.7292427]
[null,"30.4.1","signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase","Os09g0555600","Transcript","moderately similar to ( 440) AT1G75010 | Symbols: ARC3 | ARC3 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3) | chr1:28164994-28169941 REVERSEvery weakly similar to (82.4) PI5K1_ORYSA Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice)COG4642 protein|MORN repeat domain containing protein, expressed",1.4728194]
[null,30.5,"signalling.G-proteins","Os06g0195900","Transcript","highly similar to ( 894) AT1G50920 | Symbols: | GTP-binding protein-related | chr1:18870555-18872570 FORWARD COG1084 NOG Obg_like NOGCT NOG1 protein|nucleolar GTP-binding protein 1, putative, expressed",-1.0359007]
[null,30.5,"signalling.G-proteins","Os04g0620700","Transcript","weakly similar to ( 138) AT1G48920 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid binding / nucleotide binding | chr1:18098186-18101422 FORWARD protein|nucleolin, putative, expressed",-1.1026945]
[null,30.5,"signalling.G-proteins","Os05g0564400","Transcript","moderately similar to ( 370) AT5G60860 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding | chr5:24484750-24485565 FORWARDmoderately similar to ( 356) RB11B_TOBAC Ras-related protein Rab11B - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab5_related Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab4 Rab14 Rab19 Rab18 Rab6 Rab39 Rab35 Rab30 Rab26 RabA_like Rab32_Rab38 Rab7 Rab21 Rab3 Rab15 Ras_like_GTPase Rab27A Ras Rab40 Rab33B_Rab33A Rab12 Rab9 COG1100 RAS Rab23_lke RJL Ras2 Rab24 Ran Rab28 M_R_Ras_like RabL2 Rap_like Rho RalA_RalB RheB RHO Rab36_Rab34 H_N_K_Ras_like Rho4_like Rap2 Rap1 RERG_RasL11_like ARHI_like RSR1 RAN RabL4 Wrch_1 Spg1 Rab20 Rho3 Rit_Rin_Ric RGK Rac1_like RhoA_like protein|ras-related protein, putative, expressed",-1.0946509]
[null,30.5,"signalling.G-proteins","Os11g0638000","Transcript","moderately similar to ( 463) AT3G12080 | Symbols: emb2738 | emb2738 (embryo defective 2738); GTP binding | chr3:3847851-3851677 FORWARD engA COG1160 EngA2 engA PRK09518 trmE ThdF Era trmE MMR_HSR1 Era_like EngA1 era Era protein|GTP-binding protein, putative, expressed",1.5003601]
[null,30.5,"signalling.G-proteins","Os03g0246800","Transcript","nearly identical (2221) AT3G60860 | Symbols: | guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD COG5307 Sec7 Sec7 Sec7 DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.0353475]
[null,30.5,"signalling.G-proteins","Os01g0229400","Transcript","weakly similar to ( 144) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 223) RAC1_ORYSA Rac-like GTP-binding protein 1 (OsRac1) - Oryza sativa (Rice) Rop_like RHO Rho Rho4_like Rac1_like protein|ras-related protein, putative, expressed",2.7913215]
[null,30.5,"signalling.G-proteins","Os07g0408500","Transcript","moderately similar to ( 375) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_ARHGAP22_24_25 RhoGAP_fBEM3 RhoGAP_ARHGAP20 RhoGap_RalBP1 protein|rhoGAP domain containing protein, expressed",1.7848724]
[null,30.5,"signalling.G-proteins","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623]
[null,30.5,"signalling.G-proteins","Os07g0408100","Transcript","moderately similar to ( 326) AT3G49180 | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3); nucleotide binding | chr3:18229810-18231874 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.52917]
[null,30.5,"signalling.G-proteins","Os01g0540300","Transcript","weakly similar to ( 146) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDweakly similar to ( 167) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Tc10 Rho4_like protein|Ras family domain containing protein, expressed",2.1408327]
[null,30.5,"signalling.G-proteins","Os02g0632500","Transcript","highly similar to ( 781) AT1G60860 | Symbols: AGD2 | AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding | chr1:22401244-22407639 REVERSE ArfGap ArfGap BAR COG5347 PH_centaurin protein|ARF GTPase-activating domain-containing protein, putative, expressed",-1.0146769]
[null,30.5,"signalling.G-proteins","Os05g0390100","Transcript","highly similar to ( 691) AT1G03160 | Symbols: FZL | FZL (FZO-LIKE); GTP binding / GTPase/ thiamin-phosphate diphosphorylase | chr1:761321-765091 FORWARD Dynamin_N Era_like protein|FZL, putative, expressed",2.6471267]
[null,30.5,"signalling.G-proteins","Os03g0796800","Transcript","highly similar to ( 561) AT2G38840 | Symbols: | guanylate-binding family protein | chr2:16227329-16232115 FORWARD protein|GTP binding protein, putative, expressed",-0.97959137]
[null,30.5,"signalling.G-proteins","Os03g0277000","Transcript","highly similar to ( 748) AT5G09550 | Symbols: | RAB GDP-dissociation inhibitor | chr5:2963850-2966465 FORWARD GDI MRS6 protein|rab GDP dissociation inhibitor alpha, putative, expressed",2.2104716]
[null,30.5,"signalling.G-proteins","Os07g0239400","Transcript","moderately similar to ( 242) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 244) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab11_like Rab15 Rab18 Rab3 Rab27A Rab2 Rab26 Rab4 Rab19 Rab30 RabA_like Rab5_related Rab39 Rab33B_Rab33A Rab40 Rab14 Rab6 Rab21 Rab7 Rab12 Ras_like_GTPase RJL Ras Rab32_Rab38 Rab9 COG1100 RAS Rho Rab23_lke Rap_like Rab28 Rab36_Rab34 Rab24 RHO RabL4 M_R_Ras_like Rap2 RERG_RasL11_like RalA_RalB H_N_K_Ras_like Rap1 RheB RSR1 Ras2 Ran Rit_Rin_Ric Rho4_like RabL2 Wrch_1 RhoA_like Spg1 Rac1_like ARHI_like Tc10 Rho2 RhoG RAN Miro Rop_like RGK protein|ras-related protein, putative, expressed",-1.0277327]
[null,30.5,"signalling.G-proteins","Os02g0312600","Transcript","moderately similar to ( 342) AT4G35020 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase | chr4:16673176-16674540 FORWARDmoderately similar to ( 398) RAC7_ORYSA Rac-like GTP-binding protein 7 (OsRac7) (GTPase protein ROP5) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Rnd2_Rho7 Rnd1_Rho6 Rnd3_RhoE_Rho8 Ras_like_GTPase RAS COG1100 Rab21 Rab5_related H_N_K_Ras_like Rab6 M_R_Ras_like Rab8_Rab10_Rab13_like RhoBTB Rab18 Ras2 Rab11_like Rab7 RalA_RalB Rab1_Ypt1 Rap_like RheB Rab23_lke Rab19 RSR1 Rab9 Rab2 Rab27A Rab26 Rab4 RERG_RasL11_like Rap2 Rit_Rin_Ric Rap1 Rab24 Rab39 Rab3 Miro1 Rab15 Ran Rab36_Rab34 Rab14 Rab30 RabA_like Rab35 RabL2 Rab33B_Rab33A RabL4 protein|ras-related protein, putative, expressed",2.2597425]
[null,30.5,"signalling.G-proteins","Os08g0364900","Transcript","moderately similar to ( 282) AT2G43120 | Symbols: | pirin, putative | chr2:17927339-17928871 FORWARDCOG1741 Pirin Pirin_C protein|pirin, putative, expressed",-1.9497353]
[null,30.5,"signalling.G-proteins","Os02g0668500","Transcript","weakly similar to ( 182) AT4G35750 | Symbols: | Rho-GTPase-activating protein-related | chr4:16940865-16941674 REVERSE protein|rho-GTPase-activating protein-related, putative, expressed",1.8131456]
[null,30.5,"signalling.G-proteins","Os12g0155200","Transcript","moderately similar to ( 388) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP RhoGAP_fBEM3 protein|rhoGAP domain containing protein, expressed",1.116347]
[null,30.5,"signalling.G-proteins","Os03g0843100","Transcript","moderately similar to ( 309) AT1G09630 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding | chr1:3118350-3119571 REVERSEmoderately similar to ( 291) YPTC6_CHLRE Ras-related protein YPTC6 - Chlamydomonas reinhardtii Rab11_like RAB Ras Rab Rab2 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab5_related Rab4 Rab19 Rab14 Rab18 Rab39 Rab35 Rab30 Rab6 RabA_like Rab21 Rab7 Rab32_Rab38 Rab26 Rab3 Rab12 Rab27A Ras_like_GTPase Rab33B_Rab33A Rab15 Rab40 Rab9 COG1100 Ras RJL Rab24 RAS Rab28 RabL2 Rab23_lke M_R_Ras_like Rab36_Rab34 RalA_RalB RheB Rho Ran Rap_like Ras2 RHO H_N_K_Ras_like Rho4_like RSR1 RabL4 RERG_RasL11_like Rap2 Rit_Rin_Ric Spg1 Wrch_1 Rap1 Rab20 ARHI_like RAN Rop_like Rac1_like RGK Ras_dva protein|ras-related protein, putative, expressed",-1.0404965]
[null,30.5,"signalling.G-proteins","Os02g0702600","Transcript","moderately similar to ( 463) AT1G31650 | Symbols: ATROPGEF14, ROPGEF14 | ROPGEF14; Rho guanyl-nucleotide exchange factor | chr1:11326474-11329767 REVERSEPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",4.0011487]
[null,30.5,"signalling.G-proteins","Os10g0377400","Transcript","moderately similar to ( 332) AT5G65270 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding | chr5:26083437-26084550 FORWARDmoderately similar to ( 343) RB11D_TOBAC Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco) Rab11_like RAB Ras Rab Rab2 Rab4 Rab5_related Rab1_Ypt1 Rab8_Rab10_Rab13_like Rab14 Rab19 Rab18 Rab6 Rab39 Rab30 Rab35 RabA_like Rab26 Rab7 Rab21 Rab3 Rab32_Rab38 Rab27A Rab33B_Rab33A Ras Ras_like_GTPase Rab15 Rab40 Rab12 RAS Rab9 COG1100 RJL Rab23_lke Rab28 RheB Rab24 Rab36_Rab34 RalA_RalB M_R_Ras_like Rap_like RabL2 Rho Ran Ras2 H_N_K_Ras_like RSR1 Rap1 RERG_RasL11_like Rit_Rin_Ric RabL4 RHO Spg1 ARHI_like Rap2 Rho4_like Rab20 RAN Wrch_1 RGK RhoA_like protein|ras-related protein, putative, expressed",-1.4349331]
[null,30.5,"signalling.G-proteins","Os05g0513800","Transcript","moderately similar to ( 358) AT4G28950 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding | chr4:14278289-14279705 FORWARDmoderately similar to ( 438) RAC2_ORYSA Rac-like GTP-binding protein 2 (OsRac2) - Oryza sativa (Rice) Rop_like RHO Rho Rac1_like Rho4_like RhoG Cdc42 Wrch_1 Tc10 RhoA_like Ras Rho2 Rho3 Rab Ras Rnd RAB Ras_like_GTPase Rnd3_RhoE_Rho8 Rnd2_Rho7 COG1100 Rnd1_Rho6 RAS Rab21 Rab5_related H_N_K_Ras_like Rab6 Rab8_Rab10_Rab13_like Rab7 Rab18 Rab1_Ypt1 M_R_Ras_like Rab9 Rab11_like Rap_like RheB Rab23_lke RhoBTB RalA_RalB Ras2 RSR1 Rab27A Rab2 Rab19 Ran Rap1 Rab4 Rab26 Rap2 Rab39 RERG_RasL11_like Rit_Rin_Ric Rab14 Rab24 Rab3 Miro1 Rab15 RabA_like Rab35 Rab36_Rab34 Rab30 Rab32_Rab38 RJL RabL2 protein|ras-related protein, putative, expressed",3.4570682]
[null,30.5,"signalling.G-proteins","Os02g0638900","Transcript","moderately similar to ( 402) AT3G15470 | Symbols: | WD-40 repeat family protein | chr3:5216630-5219868 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.129971]
[null,30.5,"signalling.G-proteins","Os03g0819900","Transcript","moderately similar to ( 288) AT3G46060 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:16917908-16919740 FORWARDmoderately similar to ( 286) RB1BV_BETVU Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) Rab8_Rab10_Rab13_like Rab1_Ypt1 RAB Ras Rab Rab35 Rab26 Rab11_like Rab18 Rab3 Rab2 RabA_like Rab4 Rab15 Rab27A Rab5_related Rab19 Rab30 Rab39 Rab14 Rab21 Rab7 Rab33B_Rab33A Rab6 Rab40 Rab12 Ras_like_GTPase Ras Rab32_Rab38 RJL RAS Rho Rap_like Rab9 COG1100 RalA_RalB Rab23_lke RHO H_N_K_Ras_like Rab36_Rab34 M_R_Ras_like Rab28 Rap1 Rab24 Ras2 Rap2 RSR1 RabL4 Ran RheB RERG_RasL11_like Rho4_like Rit_Rin_Ric Wrch_1 RhoA_like RabL2 ARHI_like Rac1_like Spg1 RAN RGK Rho2 Tc10 Rop_like RhoG Rab20 Miro protein|ras-related protein, putative, expressed",-1.2907563]
[null,30.5,"signalling.G-proteins","Os06g0551400","Transcript","moderately similar to ( 362) AT4G18800 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding | chr4:10320156-10321339 REVERSEmoderately similar to ( 414) RIC2_ORYSA Ras-related protein RIC2 - Oryza sativa (Rice) Rab11_like RAB Ras Rab Rab2 Rab5_related Rab4 Rab8_Rab10_Rab13_like Rab1_Ypt1 Rab14 Rab18 Rab19 Rab39 RabA_like Rab6 Rab30 Rab35 Rab26 Rab7 Rab21 Rab32_Rab38 Rab33B_Rab33A Rab3 Rab27A Rab15 Ras_like_GTPase Rab40 Rab9 Ras Rab12 COG1100 RAS Rab23_lke RJL RabL2 Rho Rab24 RHO Rab36_Rab34 Ras2 Rap_like RalA_RalB M_R_Ras_like Ran Rab28 RheB Rho4_like RERG_RasL11_like Wrch_1 RabL4 Rap2 H_N_K_Ras_like Rap1 RSR1 ARHI_like Spg1 RhoG Rac1_like Rho3 RhoA_like RGK Rab20 Rho2 Rit_Rin_Ric RAN Miro Rop_like protein|ras-related protein, putative, expressed",-1.1777105]
[null,30.5,"signalling.G-proteins","Os06g0622800","Transcript","highly similar to ( 675) AT4G38200 | Symbols: | guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD DUF1981 protein|guanine nucleotide exchange family protein, putative, expressed",-1.1607436]
[null,30.5,"signalling.G-proteins","Os03g0823700","Transcript","moderately similar to ( 359) AT1G07410 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding | chr1:2276270-2277154 FORWARDmoderately similar to ( 365) RB11C_LOTJA Ras-related protein Rab11C - Lotus japonicus Rab11_like RAB Ras Rab Rab8_Rab10_Rab13_like Rab2 Rab5_related Rab4 Rab1_Ypt1 Rab14 Rab19 Rab18 Rab39 Rab6 Rab35 Rab30 Rab26 RabA_like Rab21 Rab15 Rab3 Rab27A Rab7 Rab32_Rab38 Rab12 Ras_like_GTPase Ras Rab33B_Rab33A RJL Rab40 RAS Rab9 COG1100 Rab23_lke RalA_RalB Rab24 Ras2 RheB RabL2 M_R_Ras_like Rap_like Rab28 RERG_RasL11_like Rab36_Rab34 H_N_K_Ras_like Rho Ran RSR1 RabL4 Rap1 RHO Rap2 Rho4_like Spg1 ARHI_like Rit_Rin_Ric Wrch_1 Rab20 RAN Miro RGK RhoA_like protein|ras-related protein, putative, expressed",-1.1662737]
[null,30.5,"signalling.G-proteins","Os11g0153400","Transcript","moderately similar to ( 376) AT5G22400 | Symbols: | rac GTPase activating protein, putative | chr5:7423050-7425335 REVERSE RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",2.5257094]
[null,30.5,"signalling.G-proteins","Os05g0567300","Transcript","moderately similar to ( 326) AT5G66470 | Symbols: | GTP binding / RNA binding | chr5:26541986-26544302 REVERSE era Era Era engA COG1160 MMR_HSR1 EngA1 Era_like ThdF trmE EngA2 trmE Obg_like YihA_EngB Obg protein|GTP-binding protein, putative, expressed",1.4644338]
[null,30.5,"signalling.G-proteins","Os05g0454200","Transcript","very weakly similar to (95.9) AT5G05940 | Symbols: ATROPGEF5, ROPGEF5 | ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide exchange factor | chr5:1786028-1788363 FORWARDPRONE protein|ATROPGEF7/ROPGEF7, putative, expressed",3.3420017]
[null,30.5,"signalling.G-proteins","Os01g0621300","Transcript","moderately similar to ( 218) AT2G46380 | Symbols: | unknown protein | chr2:19039377-19042171 FORWARD protein|extra-large G-protein-related, putative, expressed",0.98546124]
[null,30.5,"signalling.G-proteins","Os12g0533400","Transcript","moderately similar to ( 404) AT4G03100 | Symbols: | rac GTPase activating protein, putative | chr4:1374361-1375913 FORWARD RhoGAP RhoGAP RhoGAP RhoGAP_KIAA1688 RhoGAP_fBEM3 RhoGAP-p50rhoGAP protein|rhoGAP domain containing protein, expressed",1.8788124]
[null,30.5,"signalling.G-proteins","Os03g0781000","Transcript","highly similar to ( 540) AT1G56050 | Symbols: | GTP-binding protein-related | chr1:20963793-20966181 FORWARD PRK09601 YchF COG0012 Obg_like DUF933 TGS_YchF_C PRK09602 Ygr210 Obg Obg obgE obgE MMR_HSR1 DRG protein|GTP-binding protein, putative, expressed",1.9863502]
[null,30.6,"signalling.MAP kinases","Os04g0430200","Transcript","moderately similar to ( 474) AT1G49740 | Symbols: | phospholipase C/ phosphoric diester hydrolase | chr1:18407728-18409468 FORWARD protein|phospholipase C, putative, expressed",2.148569]
[null,30.7,"signalling.14-3-3 proteins","Os11g0609600","Transcript","moderately similar to ( 221) AT1G22300 | Symbols: GRF10, GF14 EPSILON | GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding | chr1:7879601-7881103 REVERSEmoderately similar to ( 429) 14338_ORYSA Putative 14-3-3-like protein GF14-H (G-box factor 14-3-3 homolog H) - Oryza sativa (Rice) 14-3-3 BMH1 14_3_3 protein|14-3-3 protein, putative, expressed",1.402659]
[null,30.9,"signalling.lipids","Os02g0124800","Transcript","moderately similar to ( 426) AT1G64720 | Symbols: CP5 | CP5 | chr1:24046887-24048537 REVERSE START protein|membrane related protein CP5, putative, expressed",1.7873182]
[null,30.1,"signalling.phosphorelay","Os05g0521300","Transcript","very weakly similar to (90.1) AT3G16360 | Symbols: AHP4 | AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | chr3:5554484-5555367 FORWARD protein|histidine-containing phosphotransfer protein, putative, expressed",1.5769591]
[null,30.1,"signalling.phosphorelay","Os01g0743800","Transcript","weakly similar to ( 153) AT3G16360 | Symbols: AHP4 | AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | chr3:5554484-5555367 FORWARDweakly similar to ( 102) HP1_ORYSA Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) protein|histidine-containing phosphotransfer protein, putative, expressed",-1.4168855]
[null,30.11,"signalling.light","Os12g0583500","Transcript","highly similar to ( 582) AT2G14820 | Symbols: NPY2 | NPY2 (NAKED PINS IN YUC MUTANTS 2); protein binding / signal transducer | chr2:6358864-6361300 FORWARDmoderately similar to ( 332) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",2.7286224]
[null,30.11,"signalling.light","Os02g0573200","Transcript","highly similar to ( 807) AT4G08920 | Symbols: CRY1, BLU1, HY4, OOP2, ATCRY1 | CRY1 (CRYPTOCHROME 1); ATP binding / blue light photoreceptor/ protein homodimerization/ protein kinase | chr4:5724260-5726905 FORWARDhighly similar to ( 578) PHR1_SINAL Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) PhrB FAD_binding_7 PRK10674 DNA_photolyase protein|FAD binding domain of DNA photolyase domain containing protein, expressed",1.6562303]
[null,30.11,"signalling.light","Os02g0594700","Transcript","moderately similar to ( 438) AT1G67900 | Symbols: | phototropic-responsive NPH3 family protein | chr1:25467737-25469888 FORWARDweakly similar to ( 184) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",4.573135]
[null,30.11,"signalling.light","Os03g0205700","Transcript","highly similar to ( 553) AT2G14820 | Symbols: NPY2 | NPY2 (NAKED PINS IN YUC MUTANTS 2); protein binding / signal transducer | chr2:6358864-6361300 FORWARDmoderately similar to ( 319) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",3.6300719]
[null,30.11,"signalling.light","Os03g0767600","Transcript","highly similar to ( 523) AT5G66560 | Symbols: | phototropic-responsive NPH3 family protein | chr5:26564368-26566662 FORWARDmoderately similar to ( 228) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed",1.6035231]
[null,30.11,"signalling.light","Os10g0381800","Transcript","moderately similar to ( 222) AT4G38180 | Symbols: FRS5 | FRS5 (FAR1-related sequence 5); zinc ion binding | chr4:17906702-17909404 REVERSE protein|transposon protein, putative, unclassified, expressed",-1.0341378]
[null,30.11,"signalling.light","Os06g0475800","Transcript","weakly similar to ( 149) AT4G38180 | Symbols: FRS5 | FRS5 (FAR1-related sequence 5); zinc ion binding | chr4:17906702-17909404 REVERSE protein|transposon protein, putative, unclassified, expressed",1.7737304]
[null,30.11,"signalling.light","Os07g0546400","Transcript","moderately similar to ( 259) AT3G22104 | Symbols: | phototropic-responsive NPH3 protein-related | chr3:7789814-7792179 FORWARDweakly similar to ( 110) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed",2.5183604]
[null,30.11,"signalling.light","Os04g0477000","Transcript","moderately similar to ( 438) AT1G67900 | Symbols: | phototropic-responsive NPH3 family protein | chr1:25467737-25469888 FORWARDweakly similar to ( 182) NPH3_ORYSA Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice)NPH3 protein|BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed",2.1908932]
[null,"30.11.1","signalling.light.COP9 signalosome","Os03g0861100","Transcript","moderately similar to ( 229) AT5G43310 | Symbols: | COP1-interacting protein-related | chr5:17379735-17385387 REVERSE protein|expressed protein",1.8487477]
[null,30.99,"signalling.unspecified","Os03g0256800","Transcript","moderately similar to ( 258) AT5G19390 | Symbols: | pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein | chr5:6531906-6537143 FORWARD protein|PH domain containing protein, expressed",-1.7005287]
[]
[null,31.1,"cell.organisation","Os09g0528000","Transcript","highly similar to ( 652) AT2G21300 | Symbols: | kinesin motor family protein | chr2:9114396-9118292 REVERSEmoderately similar to ( 214) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KIP3_like KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_KIF4 KISc_KIF3 KISc_BimC_Eg5 KISc_C_terminal KISc_KIF2_like KISc_KLP2_like KIP1 KISc_KIF9_like KISc_KID_like KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, expressed",1.7737902]
[null,31.1,"cell.organisation","Os12g0639600","Transcript","highly similar to ( 572) AT1G74790 | Symbols: | catalytic | chr1:28098912-28101673 FORWARD protein|expressed protein",0.970218]
[null,31.1,"cell.organisation","Os01g0946100","Transcript","moderately similar to ( 373) AT3G51930 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:19271672-19272919 FORWARD WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",1.87547]
[null,31.1,"cell.organisation","Os07g0506600","Transcript","weakly similar to ( 197) AT3G05270 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink). | chr3:1500803-1502926 REVERSEDUF869 protein|retrotransposon protein, putative, unclassified, expressed",2.7770789]
[null,31.1,"cell.organisation","Os08g0258200","Transcript","moderately similar to ( 467) AT5G57740 | Symbols: XBAT32 | XBAT32; protein binding / zinc ion binding | chr5:23394789-23397145 REVERSE ANK protein|ankyrin repeat-rich protein, putative, expressed",-0.98293716]
[null,31.1,"cell.organisation","Os01g0760000","Transcript","weakly similar to ( 144) AT1G52240 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | chr1:19458844-19459235 REVERSEvery weakly similar to (82.8) DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii Dynein_light protein|dynein light chain type 1 domain containing protein, expressed",3.341468]
[null,31.1,"cell.organisation","Os11g0170200","Transcript","weakly similar to ( 172) AT1G77580 | Symbols: | myosin heavy chain-related | chr1:29144632-29146600 REVERSE DUF869 protein|myosin heavy chain-related, putative, expressed",1.4816203]
[null,31.1,"cell.organisation","Os02g0663800","Transcript","moderately similar to ( 223) AT1G01750 | Symbols: ADF11 | ADF11 (ACTIN DEPOLYMERIZING FACTOR 11); actin binding | chr1:275528-276126 FORWARDmoderately similar to ( 236) ADF_LILLO Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) ADF ADF Cofilin_ADF protein|actin-depolymerizing factor, putative, expressed",-2.0188782]
[null,31.1,"cell.organisation","Os04g0571300","Transcript","weakly similar to ( 159) AT3G61060 | Symbols: AtPP2-A13 | AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13); carbohydrate binding | chr3:22603166-22604336 FORWARD protein|OsFBX148 - F-box domain containing protein, expressed",2.1663525]
[null,31.1,"cell.organisation","Os03g0246500","Transcript","highly similar to ( 567) AT1G19835 | Symbols: | unknown protein | chr1:6856212-6859513 REVERSEDUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",3.7885964]
[null,31.1,"cell.organisation","Os02g0269200","Transcript","weakly similar to ( 125) AT1G52240 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | chr1:19458844-19459235 REVERSE Dynein_light protein|dynein light chain type 1 domain containing protein, expressed",3.0136003]
[null,31.1,"cell.organisation","Os12g0129700","Transcript","moderately similar to ( 201) AT2G02360 | Symbols: AtPP2-B10 | AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding | chr2:619699-620736 REVERSE protein|OsFBX437 - F-box domain containing protein, expressed",-2.2358558]
[null,31.1,"cell.organisation","Os03g0758400","Transcript","moderately similar to ( 264) AT2G03430 | Symbols: | ankyrin repeat family protein | chr2:1036192-1037536 REVERSEvery weakly similar to (89.7) AKT1_ORYSA Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) ANK protein|26S proteasome non-ATPase regulatory subunit 10, putative, expressed",1.0420647]
[null,31.1,"cell.organisation","Os03g0851700","Transcript","moderately similar to ( 347) AT4G35450 | Symbols: AKR2, AFT, AKR2A | AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding | chr4:16839862-16841759 FORWARD ANK protein|ankyrin repeat domain containing protein, expressed",1.7291578]
[null,31.1,"cell.organisation","Os04g0629700","Transcript","highly similar to ( 719) AT4G05190 | Symbols: ATK5 | ATK5 (ARABIDOPSIS THALIANA KINESIN 5); microtubule motor | chr4:2675338-2679482 FORWARDweakly similar to ( 187) KLP1_CHLRE Kinesin-like protein KLP1 - Chlamydomonas reinhardtii KISc_C_terminal KISc Kinesin KISc KISc_KIF3 KISc_KIF4 KISc_KIF1A_KIF1B KISc_KHC_KIF5 KISc_CENP_E KISc_KIF9_like KISc_KIP3_like KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_KIF2_like KIP1 KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",6.459684]
[null,31.1,"cell.organisation","Os03g0215700","Transcript","moderately similar to ( 274) AT2G01750 | Symbols: ATMAP70-3 | ATMAP70-3 (microtubule-associated proteins 70-3); microtubule binding | chr2:328351-331848 FORWARDMyosin_HC-like protein|ATMAP70 protein, putative, expressed",5.5818977]
[null,31.1,"cell.organisation","Os05g0382900","Transcript","moderately similar to ( 245) AT2G38760 | Symbols: ANNAT3 | ANNAT3 (ANNEXIN ARABIDOPSIS 3); calcium ion binding / calcium-dependent phospholipid binding | chr2:16201086-16202490 FORWARDmoderately similar to ( 229) ANX4_FRAAN Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) protein|annexin, putative, expressed",2.4894917]
[null,31.1,"cell.organisation","Os02g0708400","Transcript","highly similar to ( 698) AT3G27960 | Symbols: | kinesin light chain-related | chr3:10380513-10382593 REVERSE protein|tetratricopeptide repeat domain containing protein, expressed",0.9933732]
[null,31.1,"cell.organisation","Os05g0585400","Transcript","moderately similar to ( 218) AT2G46225 | Symbols: ABIL1 | ABIL1 (Abi-1-like 1) | chr2:18982113-18984074 FORWARDhighly similar to ( 522) ABIL4_ORYSA Probable protein ABIL4 (Abl interactor-like protein 4) - Oryza sativa (Rice) protein|expressed protein",3.3436527]
[null,31.1,"cell.organisation","Os07g0532500","Transcript","weakly similar to ( 145) AT4G03500 | Symbols: | ankyrin repeat family protein | chr4:1553453-1556571 FORWARD ANK protein|ankyrin repeat family protein, putative, expressed",3.1190662]
[null,31.1,"cell.organisation","Os05g0382600","Transcript","moderately similar to ( 236) AT2G38750 | Symbols: ANNAT4 | ANNAT4 (ANNEXIN ARABIDOPSIS 4); calcium ion binding / calcium-dependent phospholipid binding | chr2:16196582-16198431 REVERSEweakly similar to ( 125) ANX4_FRAAN Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) protein|annexin, putative, expressed",2.7545216]
[null,31.1,"cell.organisation","Os01g0625200","Transcript","highly similar to ( 679) AT3G16060 | Symbols: | kinesin motor family protein | chr3:5447503-5451196 FORWARDweakly similar to ( 157) K125_TOBAC 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) KISc_KIF2_like Kinesin KISc KISc KISc_KIP3_like KISc_CENP_E KISc_C_terminal KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_BimC_Eg5 KIP1 KISc_KID_like KISc_KIF23_like KISc_KIF9_like KISc_KLP2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",3.2697058]
[null,31.1,"cell.organisation","Os08g0531100","Transcript","moderately similar to ( 333) AT1G27920 | Symbols: MAP65-8 | MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8) | chr1:9726948-9729848 FORWARD MAP65_ASE1 protein|microtubule associated protein, putative, expressed",2.5747535]
[null,31.1,"cell.organisation","Os03g0780400","Transcript","moderately similar to ( 209) AT2G31200 | Symbols: ADF6, ATADF6 | ADF6 (ACTIN DEPOLYMERIZING FACTOR 6); actin binding | chr2:13294171-13294948 FORWARDweakly similar to ( 195) ADF_VITVI Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) ADF ADF Cofilin_ADF protein|actin-depolymerizing factor, putative, expressed",-1.0711025]
[null,31.1,"cell.organisation","Os06g0474200","Transcript","moderately similar to ( 271) AT3G54170 | Symbols: ATFIP37, FIP37 | ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37); protein binding | chr3:20056848-20059396 FORWARD protein|FKBP12-interacting protein of 37 kDa, putative, expressed",-0.9868986]
[null,31.1,"cell.organisation","Os09g0343200","Transcript","weakly similar to ( 160) AT4G03500 | Symbols: | ankyrin repeat family protein | chr4:1553453-1556571 FORWARD protein|expressed protein",-2.1994035]
[null,31.1,"cell.organisation","Os07g0588200","Transcript","moderately similar to ( 392) AT5G67470 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr5:26926835-26930212 FORWARD FH2 FH2 protein|formin, putative, expressed",-0.9774709]
[null,31.1,"cell.organisation","Os11g0648100","Transcript","moderately similar to ( 211) AT5G27950 | Symbols: | kinesin motor protein-related | chr5:9984774-9987493 FORWARDweakly similar to ( 107) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_C_terminal Kinesin KISc KISc KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_KIP3_like KISc_KIF9_like KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_CENP_E Motor_domain KIP1 KISc_KIF2_like KISc_KIF23_like protein|kinesin motor domain containing protein, putative, expressed",3.4664917]
[null,31.1,"cell.organisation","Os03g0268100","Transcript","moderately similar to ( 229) AT5G59210 | Symbols: | myosin heavy chain-related | chr5:23890802-23893619 REVERSE protein|myosin heavy chain-related, putative, expressed",-0.960306]
[null,31.1,"cell.organisation","Os03g0718100","Transcript","highly similar to ( 762) AT3G12110 | Symbols: ACT11 | ACT11 (actin-11); structural constituent of cytoskeleton | chr3:3858116-3859609 FORWARDhighly similar to ( 775) ACT1_ORYSA Actin-1 - Oryza sativa (Rice) Actin ACTIN ACTIN COG5277 protein|actin, putative, expressed",-0.9754984]
[null,31.1,"cell.organisation","Os12g0169100","Transcript","weakly similar to ( 152) AT3G05270 | Symbols: | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G77580.2); Has 97002 Blast hits to 49715 proteins in 2003 species: Archae - 1158; Bacteria - 12418; Metazoa - 49297; Fungi - 7501; Plants - 3801; Viruses - 453; Other Eukaryotes - 22374 (source: NCBI BLink). | chr3:1500803-1502926 REVERSE DUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",1.8719492]
[null,31.1,"cell.organisation","Os04g0422000","Transcript","moderately similar to ( 248) AT5G09820 | Symbols: | plastid-lipid associated protein PAP / fibrillin family protein | chr5:3056090-3057380 REVERSEPAP_fibrillin protein|PAP fibrillin family domain containing protein, expressed",4.3709965]
[null,31.1,"cell.organisation","Os04g0375900","Transcript","weakly similar to ( 137) AT5G23910 | Symbols: | ATP binding / microtubule motor | chr5:8068452-8072723 FORWARD KISc_KID_like KISc Kinesin KISc KISc_C_terminal KISc_KIP3_like KISc_KIF2_like KISc_CENP_E KIP1 KISc_KIF4 KISc_KIF3 KISc_KHC_KIF5 protein|kinesin motor domain containing protein, putative, expressed",2.9517965]
[null,31.1,"cell.organisation","Os02g0775400","Transcript","highly similar to ( 919) AT5G06670 | Symbols: | ATP binding / microtubule motor | chr5:2048243-2055019 REVERSEmoderately similar to ( 228) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KHC_KIF5 KISc_KIF3 KISc_KIF4 KISc_KIP3_like KISc_BimC_Eg5 KISc_KIF1A_KIF1B KISc_C_terminal KISc_KLP2_like KISc_KIF2_like KISc_KIF23_like KIP1 KISc_KID_like KISc_KIF9_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",1.99219]
[null,31.1,"cell.organisation","Os03g0836000","Transcript","highly similar to ( 763) AT5G09810 | Symbols: ACT2, ACT7 | ACT7 (ACTIN 7); structural constituent of cytoskeleton | chr5:3052809-3054220 FORWARDhighly similar to ( 781) ACT3_ORYSA Actin-3 - Oryza sativa (Rice) Actin ACTIN ACTIN COG5277 protein|actin, putative, expressed",-1.1792774]
[null,31.1,"cell.organisation","Os03g0587200","Transcript","highly similar to ( 528) AT3G20150 | Symbols: | kinesin motor family protein | chr3:7031412-7036499 FORWARDweakly similar to ( 150) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii Kinesin-related KISc_KLP2_like Kinesin KISc KISc KISc_KHC_KIF5 KISc_KIF1A_KIF1B KISc_CENP_E KISc_BimC_Eg5 KISc_C_terminal KISc_KIF9_like KISc_KIF4 KISc_KIF3 KISc_KIP3_like KIP1 KISc_KID_like KISc_KIF2_like KISc_KIF23_like protein|Kinesin motor domain domain containing protein, expressed",2.806609]
[null,31.1,"cell.organisation","Os08g0117000","Transcript","moderately similar to ( 468) AT3G63480 | Symbols: | kinesin heavy chain, putative | chr3:23441065-23443809 REVERSEmoderately similar to ( 217) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_KHC_KIF5 Kinesin KISc KISc KISc_C_terminal KISc_KIF4 KISc_KIF3 KISc_BimC_Eg5 KISc_CENP_E KISc_KLP2_like KISc_KIF1A_KIF1B KISc_KIP3_like KISc_KIF9_like KIP1 KISc_KID_like KISc_KIF23_like KISc_KIF2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",4.2982936]
[null,31.1,"cell.organisation","Os03g0364500","Transcript","moderately similar to ( 489) AT2G26770 | Symbols: | plectin-related | chr2:11404257-11407743 REVERSE protein|proline-rich family protein, putative, expressed",1.6804456]
[null,31.1,"cell.organisation","Os03g0237600","Transcript","highly similar to ( 535) AT1G14690 | Symbols: MAP65-7 | MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7) | chr1:5052090-5054936 REVERSE MAP65_ASE1 protein|microtubule associated protein, putative, expressed",1.5514545]
[null,31.1,"cell.organisation","Os12g0547500","Transcript","highly similar to ( 787) AT2G47500 | Symbols: | ATP binding / microtubule motor | chr2:19493247-19497882 FORWARDweakly similar to ( 197) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_C_terminal KISc Kinesin KISc KISc_KHC_KIF5 KISc_KIF4 KISc_KIF3 KISc_KIP3_like KISc_KIF1A_KIF1B KISc_CENP_E KISc_BimC_Eg5 KISc_KLP2_like KISc_KID_like KISc_KIF2_like KISc_KIF9_like KIP1 KISc_KIF23_like Motor_domain protein|kinesin-4, putative, expressed",1.9185442]
[null,31.1,"cell.organisation","Os09g0450300","Transcript","highly similar to ( 561) AT2G01910 | Symbols: ATMAP65-6, MAP65-6 | ATMAP65-6; microtubule binding | chr2:417698-420182 FORWARD MAP65_ASE1 protein|microtubule associated protein, putative, expressed",3.8937235]
[null,31.1,"cell.organisation","Os08g0547500","Transcript","highly similar to ( 513) AT5G66310 | Symbols: | kinesin motor family protein | chr5:26485786-26490304 REVERSEweakly similar to ( 165) FLA10_CHLRE Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii KISc_CENP_E Kinesin KISc KISc KISc_KIP3_like KISc_KIF4 KISc_KIF1A_KIF1B KISc_KIF3 KISc_C_terminal KISc_KHC_KIF5 KISc_BimC_Eg5 KIP1 KISc_KLP2_like KISc_KIF9_like KISc_KIF2_like KISc_KID_like KISc_KIF23_like Motor_domain protein|kinesin motor domain containing protein, expressed",4.565473]
[null,31.1,"cell.organisation","Os08g0280200","Transcript","highly similar to ( 503) AT2G25050 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr2:10654108-10659383 REVERSE FH2 FH2 protein|retrotransposon protein, putative, unclassified, expressed",-1.12704]
[null,31.1,"cell.organisation","Os02g0817200","Transcript","highly similar to ( 543) AT2G31300 | Symbols: ARPC1B, ARPC1 | ARPC1B (ACTIN-RELATED PROTEIN C1B); actin binding / nucleotide binding | chr2:13346313-13349787 REVERSE protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2237717]
[null,31.1,"cell.organisation","Os02g0810200","Transcript","highly similar to ( 503) AT4G14330 | Symbols: | phragmoplast-associated kinesin-related protein 2 (PAKRP2) | chr4:8244228-8247286 FORWARDweakly similar to ( 101) K125_TOBAC 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) KISc KISc Kinesin KISc_C_terminal KISc_BimC_Eg5 KISc_KHC_KIF5 KISc_KIF2_like KIP1 KISc_KID_like KISc_KIF3 KISc_KIP3_like KISc_CENP_E KISc_KIF4 KISc_KIF1A_KIF1B KISc_KIF9_like KISc_KIF23_like KISc_KLP2_like Motor_domain protein|kinesin motor domain containing protein, putative, expressed",3.3432457]
[null,31.1,"cell.organisation","Os02g0588300","Transcript","highly similar to ( 842) AT5G35700 | Symbols: FIM2 | FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding | chr5:13872833-13876432 REVERSE SAC6 protein|fimbrin-like protein 2, putative, expressed",2.2123897]
[null,31.1,"cell.organisation","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655]
[null,31.1,"cell.organisation","Os04g0649200","Transcript","moderately similar to ( 205) AT1G19835 | Symbols: | unknown protein | chr1:6856212-6859513 REVERSEDUF869 protein|plant protein of unknown function DUF869 domain containing protein, expressed",3.0476112]
[null,31.1,"cell.organisation","Os03g0761200","Transcript","moderately similar to ( 476) AT5G65860 | Symbols: | ankyrin repeat family protein | chr5:26347706-26348686 REVERSE protein|ankyrin repeat domain containing protein, putative, expressed",-1.309445]
[null,31.1,"cell.organisation","Os02g0601700","Transcript","moderately similar to ( 482) AT3G01750 | Symbols: | ankyrin repeat family protein | chr3:270615-272691 FORWARD ANK protein|expressed protein",2.82453]
[null,31.1,"cell.organisation","Os04g0692100","Transcript","moderately similar to ( 326) AT3G10220 | Symbols: | tubulin folding cofactor B | chr3:3161977-3164037 FORWARD CAP_GLY Alp11_N protein|tubulin folding cofactor B, putative, expressed",-1.1458529]
[null,31.1,"cell.organisation","Os01g0514600","Transcript","highly similar to ( 806) AT5G48460 | Symbols: | fimbrin-like protein, putative | chr5:19636225-19639365 REVERSE SAC6 CH CH protein|fimbrin-like protein 2, putative, expressed",3.9300988]
[null,31.1,"cell.organisation","Os03g0783000","Transcript","moderately similar to ( 387) AT3G60830 | Symbols: ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton | chr3:22474298-22476000 FORWARDweakly similar to ( 159) ACT12_SOLTU Actin-100 (Fragment) - Solanum tuberosum (Potato) ACTIN ACTIN Actin COG5277 protein|actin, putative, expressed",-0.96566933]
[null,31.1,"cell.organisation","Os02g0457500","Transcript","moderately similar to ( 459) AT5G14230 | Symbols: | protein binding | chr5:4591883-4595775 FORWARD ANK protein|ankyrin repeat family protein, putative, expressed",2.5312507]
[null,31.1,"cell.organisation","Os09g0133600","Transcript","moderately similar to ( 311) AT4G04020 | Symbols: FIB | FIB (FIBRILLIN); structural molecule | chr4:1932161-1933546 FORWARDmoderately similar to ( 474) PAP2_ORYSA Probable plastid-lipid-associated protein 2, chloroplast precursor (Fibrillin-like protein 2) - Oryza sativa (Rice)PAP_fibrillin protein|PAP fibrillin family domain containing protein, expressed",-1.5827652]
[null,31.2,"cell.division","Os09g0515100","Transcript","nearly identical (1078) AT1G05910 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARDmoderately similar to ( 219) CDC48_SOYBN Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) RPT1 PRK03992 SpoVK AAA HflB hflB COG1223 BROMO protein|bromodomain protein 103, putative, expressed",-1.4211426]
[null,31.2,"cell.division","Os01g0846800","Transcript","highly similar to ( 509) AT3G55580 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD ATS1 protein|regulator of chromosome condensation, putative, expressed",-1.3124882]
[null,31.2,"cell.division","Os01g0700200","Transcript","highly similar to ( 984) AT4G14368 | Symbols: | zinc ion binding | chr4:8274313-8278810 REVERSE ATS1 protein|regulator of chromosome condensation, putative, expressed",2.221728]
[null,31.2,"cell.division","Os05g0579800","Transcript","moderately similar to ( 291) AT2G18290 | Symbols: APC10 | anaphase-promoting complex, subunit 10 family / APC10 family | chr2:7948522-7950096 REVERSE APC10 DOC1 protein|anaphase-promoting complex subunit 10, putative, expressed",-0.989391]
[null,31.2,"cell.division","Os07g0570700","Transcript","weakly similar to ( 189) AT3G63190 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSEweakly similar to ( 197) RRFC_SPIOL Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) - Spinacia oleracea (Spinach) frr Frr RRF RRF protein|ribosome recycling factor, putative, expressed",1.8791462]
[null,31.2,"cell.division","Os04g0462900","Transcript","moderately similar to ( 326) AT5G40770 | Symbols: ATPHB3 | ATPHB3 (PROHIBITIN 3) | chr5:16315589-16316621 REVERSE Band_7_prohibitin PHB Band_7 HflC protein|prohibitin, putative, expressed",-1.0250721]
[null,31.2,"cell.division","Os08g0430700","Transcript","highly similar to ( 544) AT5G16040 | Symbols: | regulator of chromosome condensation (RCC1) family protein | chr5:5240860-5243308 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.0921475]
[null,31.2,"cell.division","Os04g0583700","Transcript","highly similar to ( 659) AT1G65920 | Symbols: | regulator of chromosome condensation (RCC1) family protein / zinc finger protein-related | chr1:24525267-24529204 REVERSE ATS1 protein|ZR1 protein, putative, expressed",2.5869057]
[null,31.2,"cell.division","Os02g0554100","Transcript","highly similar to ( 622) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",2.4206684]
[null,31.2,"cell.division","Os04g0676000","Transcript","highly similar to ( 647) AT3G19180 | Symbols: ARC6H, PARC6 | ARC6H | chr3:6632810-6636547 FORWARD protein|OsFBX154 - F-box domain containing protein, expressed",0.97781354]
[null,31.2,"cell.division","Os04g0435700","Transcript","highly similar to ( 586) AT5G63860 | Symbols: UVR8 | UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor | chr5:25554821-25558587 REVERSE ATS1 protein|Regulator of chromosome condensation domain containing protein, expressed",1.2835745]
[null,"31.2.5","cell.division.plastid","Os02g0834700","Transcript","moderately similar to ( 384) AT2G21280 | Symbols: GC1, ATSULA, SULA | SULA; binding / catalytic/ coenzyme binding | chr2:9110502-9112679 REVERSE COG1090 WcaG Epimerase protein|cell division inhibitor, putative, expressed",3.2026384]
[null,31.3,"cell.cycle","Os03g0123300","Transcript","highly similar to ( 608) AT4G22910 | Symbols: FZR2 | FZR2 (FIZZY-RELATED 2); signal transducer | chr4:12012743-12015663 FORWARD WD40 COG2319 protein|WD repeat-containing protein, putative, expressed",1.0072118]
[null,31.3,"cell.cycle","Os01g0805600","Transcript","moderately similar to ( 340) AT5G06150 | Symbols: CYC1BAT, CYCB1;2 | CYC1BAT; cyclin-dependent protein kinase regulator | chr5:1859542-1861570 REVERSEmoderately similar to ( 366) CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) Cyclin_N COG5024 Cyclin_C CYCLIN protein|cyclin, putative, expressed",3.2416708]
[null,31.3,"cell.cycle","Os04g0563700","Transcript","moderately similar to ( 434) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEmoderately similar to ( 468) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C CYCLIN protein|cyclin, putative, expressed",2.7577922]
[null,31.3,"cell.cycle","Os03g0308200","Transcript","highly similar to ( 835) AT5G26850 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cyclin-related (TAIR:AT2G41830.1); Has 199 Blast hits to 197 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 19; Plants - 59; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:9445950-9450584 FORWARD protein|cyclin-related protein, putative, expressed",1.3246378]
[null,31.3,"cell.cycle","Os03g0617500","Transcript","weakly similar to ( 111) AT4G37630 | Symbols: CYCD5;1 | CYCD5;1 (cyclin d5;1); cyclin-dependent protein kinase | chr4:17679497-17680788 FORWARD Cyclin_N protein|cyclin, putative, expressed",2.2747788]
[null,31.3,"cell.cycle","Os09g0466100","Transcript","weakly similar to ( 190) AT5G65420 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | chr5:26141592-26143750 REVERSE Cyclin_N protein|cyclin, putative, expressed",1.4984407]
[null,31.3,"cell.cycle","Os06g0726800","Transcript","moderately similar to ( 422) AT1G76310 | Symbols: CYCB2;4 | CYCB2;4 (CYCLIN B2;4); cyclin-dependent protein kinase regulator | chr1:28628046-28630199 REVERSEhighly similar to ( 808) CCNB2_ORYSA G2/mitotic-specific cyclin-2 (B-like cyclin) (CycOs2) - Oryza sativa (Rice) COG5024 Cyclin_N Cyclin_C protein|cyclin, putative, expressed",2.0030484]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os09g0501850","Transcript","moderately similar to ( 206) AT3G25220 | Symbols: FKBP15-1 | FKBP15-1; FK506 binding / peptidyl-prolyl cis-trans isomerase | chr3:9182691-9184463 FORWARDweakly similar to ( 195) FKB15_VICFA FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) FKBP_C FkpA PRK11570 PRK10902 protein|peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed",-0.9592638]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os04g0352400","Transcript","highly similar to ( 688) AT3G25230 | Symbols: ROF1, ATFKBP62, FKBP62 | ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase | chr3:9188257-9191175 FORWARDhighly similar to ( 661) FKB70_WHEAT 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) FKBP_C FkpA PRK10902 PRK11570 protein|peptidyl-prolyl isomerase, putative, expressed",-1.4278479]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os06g0708500","Transcript","moderately similar to ( 295) AT5G58710 | Symbols: ROC7 | ROC7; peptidyl-prolyl cis-trans isomerase | chr5:23717840-23719495 FORWARDmoderately similar to ( 217) CYPH_CATRO Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_SpCYP2_like cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_CeCYP16-like cyclophilin_RRM protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",-1.2119535]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os01g0111100","Transcript","moderately similar to ( 246) AT1G74070 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr1:27851749-27852861 REVERSE cyclophilin Pro_isomerase cyclophilin_ABH_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",4.180256]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os07g0565600","Transcript","highly similar to ( 521) AT3G15520 | Symbols: | peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase | chr3:5249739-5252432 REVERSEweakly similar to ( 131) TLP40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach)cyclophilin_TLP40_like protein|peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed",1.9124368]
[null,"31.3.1","cell.cycle.peptidylprolyl isomerase","Os05g0103200","Transcript","moderately similar to ( 293) AT5G13120 | Symbols: | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | chr5:4162714-4164720 REVERSEmoderately similar to ( 221) CYPB_VICFA Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) cyclophilin_ABH_like Pro_isomerase cyclophilin PpiB cyclophilin_WD40 cyclophilin_RING Cyclophilin_PPIL3_like cyclophilin_SpCYP2_like cyclophilin_CeCYP16-like cyclophilin_RRM cyclophilin_EcCYP_like protein|peptidyl-prolyl cis-trans isomerase, putative, expressed",2.154865]
[null,31.4,"cell.vesicle transport","Os04g0612600","Transcript","moderately similar to ( 386) AT1G30630 | Symbols: | coatomer protein epsilon subunit family protein / COPE family protein | chr1:10858546-10860173 REVERSE Coatomer_E protein|coatomer subunit epsilon, putative, expressed",-1.1847388]
[null,31.4,"cell.vesicle transport","Os11g0649900","Transcript","weakly similar to ( 113) AT5G59730 | Symbols: ATEXO70H7 | ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7); protein binding | chr5:24064096-24066004 REVERSE Exo70 protein|exo70 exocyst complex subunit, putative, expressed",1.648172]
[null,31.4,"cell.vesicle transport","Os05g0378900","Transcript","highly similar to ( 771) AT1G67930 | Symbols: | Golgi transport complex protein-related | chr1:25474218-25477332 REVERSE protein|golgi transport complex protein-related, putative, expressed",-1.2834529]
[null,31.4,"cell.vesicle transport","Os12g0104800","Transcript","nearly identical (3023) AT3G11130 | Symbols: | clathrin heavy chain, putative | chr3:3482575-3491667 REVERSE CLH Clathrin protein|clathrin heavy chain, putative, expressed",-1.286427]
[null,31.4,"cell.vesicle transport","Os03g0736500","Transcript","moderately similar to ( 268) AT1G08560 | Symbols: SYP111, KN, ATSYP111 | SYP111 (SYNTAXIN OF PLANTS 111); SNAP receptor | chr1:2709778-2710710 REVERSE SynN COG5074 protein|syntaxin-related protein, putative, expressed",4.2236824]
[null,31.4,"cell.vesicle transport","Os06g0143900","Transcript","moderately similar to ( 410) AT3G15980 | Symbols: | coatomer protein complex, subunit beta 2 (beta prime), putative | chr3:5412015-5418313 REVERSE Coatomer_WDAD protein|coatomer subunit beta, putative, expressed",-0.9528351]
[null,31.4,"cell.vesicle transport","Os02g0209000","Transcript","nearly identical (1511) AT1G79990 | Symbols: | protein binding / structural molecule | chr1:30085910-30091949 FORWARDvery weakly similar to (92.8) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii Coatomer_WDAD WD40 COG2319 protein|coatomer subunit beta, putative, expressed",-1.1169]
[null,31.4,"cell.vesicle transport","Os11g0104933","Transcript","nearly identical (3021) AT3G11130 | Symbols: | clathrin heavy chain, putative | chr3:3482575-3491667 REVERSE CLH Clathrin protein|clathrin heavy chain, putative, expressed",-1.0688547]
[null,31.4,"cell.vesicle transport","Os03g0803000","Transcript","moderately similar to ( 345) AT2G32670 | Symbols: ATVAMP725, VAMP725 | ATVAMP725 | chr2:13857941-13859346 FORWARD Synaptobrevin protein|vesicle-associated membrane protein, putative, expressed",-1.0174967]
[null,31.4,"cell.vesicle transport","Os03g0711400","Transcript","nearly identical (1550) AT1G62020 | Symbols: | coatomer protein complex, subunit alpha, putative | chr1:22919814-22923728 FORWARDweakly similar to ( 105) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii COPI_C Coatomer_WDAD WD40 COG2319 protein|coatomer alpha subunit, putative, expressed",-1.3364779]
[null,31.4,"cell.vesicle transport","Os01g0355500","Transcript","moderately similar to ( 267) AT4G12770 | Symbols: | heat shock protein binding | chr4:7506736-7511408 REVERSE TolA tolA TolA PRK05035 protein|auxilin, putative, expressed",-1.2626818]
[null,31.4,"cell.vesicle transport","Os01g0833700","Transcript","highly similar to ( 576) AT5G05010 | Symbols: | clathrin adaptor complexes medium subunit-related | chr5:1477137-1479872 FORWARDhighly similar to ( 873) COPD_ORYSA Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) Adap_comp_sub protein|coatomer subunit delta, putative, expressed",-1.2082494]
[null,31.4,"cell.vesicle transport","Os06g0168500","Transcript","moderately similar to ( 275) AT5G08080 | Symbols: SYP132, ATSYP132 | SYP132 (SYNTAXIN OF PLANTS 132); SNAP receptor | chr5:2588532-2590488 FORWARD SynN protein|syntaxin, putative, expressed",-1.4581944]
[null,31.4,"cell.vesicle transport","Os02g0803600","Transcript","moderately similar to ( 284) AT4G32150 | Symbols: VAMP711, ATVAMP711 | ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) | chr4:15526407-15527651 REVERSE Synaptobrevin protein|vesicle-associated membrane protein, putative, expressed",-1.9311813]
[null,31.4,"cell.vesicle transport","Os02g0126800","Transcript","moderately similar to ( 300) AT2G45200 | Symbols: GOS12, ATGOS12 | GOS12 (GOLGI SNARE 12); SNARE binding | chr2:18637689-18639640 REVERSE V-SNARE protein|vesicle transport v-SNARE protein, putative, expressed",-0.9907568]
[null,31.4,"cell.vesicle transport","Os09g0439600","Transcript","highly similar to ( 561) AT1G72470 | Symbols: ATEXO70D1 | ATEXO70D1 (exocyst subunit EXO70 family protein D1); protein binding | chr1:27283759-27285660 FORWARD Exo70 protein|exo70 exocyst complex subunit, putative, expressed",-1.0782857]
[null,31.4,"cell.vesicle transport","Os03g0787000","Transcript","moderately similar to ( 293) AT3G11820 | Symbols: SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1 | SYP121 (SYNTAXIN OF PLANTS 121); SNAP receptor/ protein anchor | chr3:3729540-3730868 REVERSE SynN COG5074 protein|syntaxin, putative, expressed",-1.30061]
[null,31.4,"cell.vesicle transport","Os03g0227000","Transcript","nearly identical (1310) AT4G34450 | Symbols: | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD SEC21 Adaptin_N Gamma-COP protein|coatomer subunit gamma-1, putative, expressed",-1.2748643]
[null,31.4,"cell.vesicle transport","Os06g0698600","Transcript","highly similar to ( 701) AT4G31540 | Symbols: ATEXO70G1 | ATEXO70G1 (exocyst subunit EXO70 family protein G1); protein binding | chr4:15284739-15286802 REVERSE Exo70 protein|ATEXO70G1, putative, expressed",-1.1868092]
[null,31.4,"cell.vesicle transport","Os11g0174000","Transcript","nearly identical (1415) AT4G31480 | Symbols: | coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | chr4:15264076-15267384 FORWARD Coatamer_beta_C COG5096 Adaptin_N protein|coatomer subunit beta-1, putative, expressed",-1.2452122]
[null,31.5,"cell.cell death","Os01g0165200","Transcript","moderately similar to ( 360) AT5G01660 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11000.2); Has 12390 Blast hits to 5423 proteins in 323 species: Archae - 22; Bacteria - 787; Metazoa - 8729; Fungi - 223; Plants - 966; Viruses - 639; Other Eukaryotes - 1024 (source: NCBI BLink). | chr5:244504-248442 REVERSEweakly similar to ( 121) B2_DAUCA B2 protein - Daucus carota (Carrot) protein|kelch repeat-containing protein, putative, expressed",0.9594617]
[null,31.5,"cell.cell death","Os09g0563700","Transcript","weakly similar to ( 130) AT2G35140 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11000.2). | chr2:14813990-14816808 FORWARD protein|N-rich protein, putative, expressed",2.1630661]
[null,"31.5.1","cell.cell death.plants","Os06g0251100","Transcript","highly similar to ( 508) AT1G14780 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24290.2); Has 119 Blast hits to 118 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5091020-5093873 FORWARDMACPF protein|membrane attack complex component/perforin/complement C9, putative, expressed",-1.2957335]
[null,"31.5.1","cell.cell death.plants","Os03g0146400","Transcript","highly similar to ( 712) AT3G44880 | Symbols: ACD1, LLS1, PAO | ACD1 (ACCELERATED CELL DEATH 1); iron-sulfur cluster binding / pheophorbide a oxygenase | chr3:16383858-16386204 FORWARDvery weakly similar to (83.6) CAO_CHLRE Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtiiRieske_RO_Alpha_PaO HcaE PaO Rieske_RO_Alpha_Tic55 Rieske_RO_Alpha_N Rieske_RO_Alpha_PhDO_like Rieske_RO_Alpha_VanA_DdmC Rieske Rieske_RO_Alpha_Cao protein|pheophorbide a oxygenase, chloroplast precursor, putative, expressed",-1.6110601]
[null,"31.5.1","cell.cell death.plants","Os09g0380200","Transcript","moderately similar to ( 258) AT5G23040 | Symbols: CDF1 | CDF1 (CELL GROWTH DEFECT FACTOR 1) | chr5:7729465-7730930 REVERSE protein|expressed protein",0.96530086]
[null,"31.5.1","cell.cell death.plants","Os05g0557400","Transcript","highly similar to ( 568) AT1G28380 | Symbols: NSL1 | NSL1 (necrotic spotted lesions 1) | chr1:9963696-9966060 FORWARD protein|membrane attack complex component/perforin/complement C9, putative, expressed",-1.911023]
[]
[null,33.1,"development.storage proteins","Os03g0640000","Transcript","weakly similar to ( 144) AT3G54950 | Symbols: PLP7, PLA IIIA | PLA IIIA (PATATIN-LIKE PROTEIN 6) | chr3:20359076-20360774 REVERSE protein|PLA IIIA/PLP7, putative, expressed",1.5056328]
[null,33.2,"development.late embryogenesis abundant","Os01g0225600","Transcript","weakly similar to ( 183) AT1G01470 | Symbols: LEA14, LSR3 | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | chr1:172295-172826 REVERSEmoderately similar to ( 206) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",1.7882758]
[null,33.2,"development.late embryogenesis abundant","Os03g0843300","Transcript","moderately similar to ( 408) AT2G44060 | Symbols: | late embryogenesis abundant family protein / LEA family protein | chr2:18226922-18227988 FORWARDvery weakly similar to (85.1) LEA14_GOSHI Late embryogenesis abundant protein Lea14-A - Gossypium hirsutum (Upland cotton)LEA_2 protein|late embryogenesis abundant protein, putative, expressed",-0.989985]
[null,33.2,"development.late embryogenesis abundant","Os01g0574800","Transcript","Hin1 protein|harpin-induced protein 1 domain containing protein, expressed",1.6755605]
[null,33.3,"development.squamosa promoter binding like (SPL)","Os06g0659100","Transcript","weakly similar to ( 151) AT1G02065 | Symbols: SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding | chr1:365625-367149 FORWARDweakly similar to ( 131) LG1_MAIZE LIGULELESS1 protein - Zea mays (Maize)SBP protein|OsSPL10 - SBP-box gene family member, expressed",-1.209332]
[null,33.3,"development.squamosa promoter binding like (SPL)","Os06g0703500","Transcript","weakly similar to ( 169) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEweakly similar to ( 113) SBP1_ANTMA Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL12 - SBP-box gene family member, expressed",2.0117123]
[null,33.3,"development.squamosa promoter binding like (SPL)","Os11g0496600","Transcript","weakly similar to ( 135) AT5G50570 | Symbols: | squamosa promoter-binding protein, putative | chr5:20582555-20583791 REVERSEweakly similar to ( 112) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL19 - SBP-box gene family member, expressed",1.261798]
[null,33.3,"development.squamosa promoter binding like (SPL)","Os02g0174100","Transcript","weakly similar to ( 134) AT5G43270 | Symbols: SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | chr5:17360527-17362143 REVERSEvery weakly similar to (95.5) SBP2_ANTMA Squamosa promoter-binding protein 2 - Antirrhinum majus (Garden snapdragon)SBP protein|OsSPL4 - SBP-box gene family member, expressed",1.9949021]
[null,33.99,"development.unspecified","Os03g0309800","Transcript","highly similar to ( 618) AT3G06430 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) | chr3:1956658-1958240 REVERSEweakly similar to ( 123) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR2, putative, expressed",1.8085753]
[null,33.99,"development.unspecified","Os01g0881300","Transcript","moderately similar to ( 240) AT1G21460 | Symbols: | nodulin MtN3 family protein | chr1:7512030-7513281 REVERSE MtN3_slv protein|nodulin MtN3 family protein, putative, expressed",2.1036482]
[null,33.99,"development.unspecified","Os04g0677700","Transcript","highly similar to ( 595) AT5G23430 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:7894073-7899862 REVERSEweakly similar to ( 110) PF20_CHLRE Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii WD40 COG2319 protein|katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed",2.2294672]
[null,33.99,"development.unspecified","Os10g0181200","Transcript","highly similar to ( 808) AT4G34830 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: EMB2745 (EMBRYO DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 19818 Blast hits to 5849 proteins in 171 species: Archae - 3; Bacteria - 16; Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0; Other Eukaryotes - 1100 (source: NCBI BLink). | chr4:16599976-16605994 REVERSEweakly similar to ( 126) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.3580487]
[null,33.99,"development.unspecified","Os06g0729300","Transcript","nearly identical (1368) AT1G48410 | Symbols: AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | chr1:17886285-17891892 REVERSE Piwi_ago-like Piwi Piwi_piwi-like_Euk Piwi-like PAZ PAZ_argonaute_like DUF1785 protein|PAZ domain containing protein, putative, expressed",2.4585974]
[null,33.99,"development.unspecified","Os05g0552300","Transcript","moderately similar to ( 452) AT3G18130 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371 REVERSEhighly similar to ( 534) GBLP_ORYSA Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.2935623]
[null,33.99,"development.unspecified","Os01g0864500","Transcript","very weakly similar to (94.4) AT2G35980 | Symbols: YLS9, NHL10, ATNHL10 | YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) | chr2:15110635-15111318 FORWARDHin1 protein|harpin-induced protein 1 domain containing protein, expressed",-1.860396]
[null,33.99,"development.unspecified","Os06g0254700","Transcript","moderately similar to ( 223) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",1.5088993]
[null,33.99,"development.unspecified","Os06g0131700","Transcript","moderately similar to ( 269) AT2G46770 | Symbols: NST1, EMB2301, ANAC043 | EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | chr2:19220917-19222822 REVERSEmoderately similar to ( 224) NAC76_ORYSA NAC domain-containing protein 76 (ONAC076) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",4.2799582]
[null,33.99,"development.unspecified","Os11g0705200","Transcript","moderately similar to ( 419) AT2G37650 | Symbols: | scarecrow-like transcription factor 9 (SCL9) | chr2:15792623-15794779 FORWARDweakly similar to ( 187) CIGR2_ORYSA Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice)GRAS protein|GRAS family transcription factor domain containing protein, expressed",-1.414639]
[null,33.99,"development.unspecified","Os02g0170000","Transcript","highly similar to ( 699) AT2G35130 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:14807589-14810164 REVERSEweakly similar to ( 168) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide containing protein, putative, expressed",2.769395]
[null,33.99,"development.unspecified","Os03g0162900","Transcript","highly similar to ( 736) AT3G23020 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:8177215-8179743 REVERSEweakly similar to ( 159) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",4.1304536]
[null,33.99,"development.unspecified","Os03g0201400","Transcript","moderately similar to ( 466) AT2G16880 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7312262-7314493 REVERSEmoderately similar to ( 256) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.2293673]
[null,33.99,"development.unspecified","Os02g0128800","Transcript","moderately similar to ( 452) AT3G58040 | Symbols: SINAT2 | SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr3:21489612-21491085 FORWARDweakly similar to ( 154) SINAL_DROME Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) Sina Sina protein|seven in absentia protein family domain containing protein, expressed",1.5247623]
[null,33.99,"development.unspecified","Os02g0178100","Transcript","very weakly similar to (84.7) AT5G57660 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARDCCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.4953613]
[null,33.99,"development.unspecified","Os06g0572400","Transcript","moderately similar to ( 228) AT2G19580 | Symbols: TET2 | TET2 (TETRASPANIN2) | chr2:8472393-8475021 REVERSE protein|tetraspanin family protein, putative, expressed",1.5327787]
[null,33.99,"development.unspecified","Os09g0536700","Transcript","moderately similar to ( 287) AT4G34950 | Symbols: | nodulin family protein | chr4:16642544-16644759 REVERSENodulin-like protein|nodulin, putative, expressed",-1.097448]
[null,33.99,"development.unspecified","Os03g0327100","Transcript","moderately similar to ( 273) AT5G18270 | Symbols: ANAC087 | ANAC087; transcription factor | chr5:6041241-6042743 REVERSEmoderately similar to ( 223) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.2523727]
[null,33.99,"development.unspecified","Os03g0211600","Transcript","highly similar to ( 509) AT3G29290 | Symbols: emb2076 | emb2076 (embryo defective 2076) | chr3:11238421-11240125 FORWARDweakly similar to ( 106) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.2526853]
[null,33.99,"development.unspecified","Os05g0145400","Transcript","moderately similar to ( 405) AT3G24440 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) | chr3:8876207-8878171 REVERSE protein|Fibronectin type III domain containing protein, expressed",-1.1132355]
[null,33.99,"development.unspecified","Os08g0535800","Transcript","weakly similar to ( 102) AT5G13180 | Symbols: ANAC083 | ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | chr5:4196643-4197577 FORWARDvery weakly similar to (89.0) NAC68_ORYSA NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-1.5443617]
[null,33.99,"development.unspecified","Os06g0273500","Transcript","moderately similar to ( 340) AT5G15890 | Symbols: | unknown protein | chr5:5187687-5189348 REVERSEDUF231 protein|expressed protein",1.3914353]
[null,33.99,"development.unspecified","Os02g0582300","Transcript","highly similar to ( 503) AT5G65560 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:26201012-26203759 REVERSEmoderately similar to ( 270) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",-1.3830237]
[null,33.99,"development.unspecified","Os07g0548300","Transcript","moderately similar to ( 494) AT5G42310 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16915860-16918238 FORWARDweakly similar to ( 189) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",2.0732763]
[null,33.99,"development.unspecified","Os02g0594800","Transcript","moderately similar to ( 271) AT3G01600 | Symbols: anac044 | anac044 (Arabidopsis NAC domain containing protein 44); transcription factor | chr3:229365-231105 FORWARDNAM protein|no apical meristem protein, putative, expressed",1.3745664]
[null,33.99,"development.unspecified","Os06g0300800","Transcript","nearly identical (1007) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0962677]
[null,33.99,"development.unspecified","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715]
[null,33.99,"development.unspecified","Os01g0208000","Transcript","moderately similar to ( 247) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.9492868]
[null,33.99,"development.unspecified","Os07g0671200","Transcript","moderately similar to ( 377) AT2G32630 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13844834-13846708 FORWARDmoderately similar to ( 220) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.2524633]
[null,33.99,"development.unspecified","Os07g0604700","Transcript","weakly similar to ( 117) AT3G29970 | Symbols: | germination protein-related | chr3:11745299-11746481 FORWARDB12D protein|B12D protein, putative, expressed",-1.6997224]
[null,33.99,"development.unspecified","Os05g0171200","Transcript","weakly similar to ( 108) AT5G62200 | Symbols: | embryo-specific protein-related | chr5:24984463-24985674 REVERSEATS3 protein|embryo-specific 3, putative, expressed",2.1845307]
[null,33.99,"development.unspecified","Os10g0421800","Transcript","nearly identical (1080) AT4G31850 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) | chr4:15403020-15406358 FORWARDmoderately similar to ( 251) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.4434547]
[null,33.99,"development.unspecified","Os08g0562200","Transcript","moderately similar to ( 229) AT3G10500 | Symbols: anac053 | anac053 (Arabidopsis NAC domain containing protein 53); transcription factor | chr3:3271718-3273887 FORWARDweakly similar to ( 160) NAC74_ORYSA NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",-0.9606611]
[null,33.99,"development.unspecified","Os03g0222600","Transcript","moderately similar to ( 253) AT2G33380 | Symbols: RD20 | RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | chr2:14144984-14146374 REVERSECaleosin protein|caleosin related protein, putative, expressed",3.23753]
[null,33.99,"development.unspecified","Os05g0275000","Transcript","highly similar to ( 819) AT2G18940 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:8203873-8206341 REVERSEmoderately similar to ( 224) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.3727248]
[null,33.99,"development.unspecified","Os12g0510900","Transcript","moderately similar to ( 293) AT1G10200 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc ion binding | chr1:3346677-3347763 REVERSEmoderately similar to ( 248) SF3_HELAN Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) protein|OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed",3.5731878]
[null,33.99,"development.unspecified","Os05g0356700","Transcript","moderately similar to ( 452) AT2G40320 | Symbols: | unknown protein | chr2:16840330-16842139 FORWARDDUF231 protein|PMR5, putative, expressed",2.0183454]
[null,33.99,"development.unspecified","Os12g0113900","Transcript","weakly similar to ( 138) AT2G45260 | Symbols: | unknown protein | chr2:18664661-18665938 REVERSE protein|expressed protein",2.575023]
[null,33.99,"development.unspecified","Os01g0672100","Transcript","moderately similar to ( 351) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.7783573]
[null,33.99,"development.unspecified","Os02g0722800","Transcript","highly similar to ( 718) AT3G13300 | Symbols: VCS | VCS (VARICOSE); nucleotide binding / protein homodimerization | chr3:4304085-4309949 FORWARD protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0648848]
[null,33.99,"development.unspecified","Os02g0810900","Transcript","moderately similar to ( 236) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 179) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",2.6135428]
[null,33.99,"development.unspecified","Os10g0465000","Transcript","moderately similar to ( 229) AT5G43920 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17673397-17675630 FORWARD WD40 protein|WD repeat-containing protein, putative, expressed",1.2224302]
[null,33.99,"development.unspecified","Os04g0555000","Transcript","moderately similar to ( 259) AT4G00150 | Symbols: | scarecrow-like transcription factor 6 (SCL6) | chr4:57429-59105 REVERSEvery weakly similar to (88.6) NSP2_MEDTR Nodulation signaling pathway 2 protein - Medicago truncatula (Barrel medic)GRAS protein|scarecrow, putative, expressed",1.7134777]
[null,33.99,"development.unspecified","Os01g0803300","Transcript","moderately similar to ( 417) AT5G07050 | Symbols: | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink). | chr5:2191533-2193416 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3495276]
[null,33.99,"development.unspecified","Os03g0825700","Transcript","nearly identical (1073) AT3G09090 | Symbols: DEX1 | DEX1 (DEFECTIVE IN EXINE FORMATION 1); calcium ion binding | chr3:2783165-2787552 REVERSE protein|FG-GAP repeat-containing protein, putative, expressed",-1.0877773]
[null,33.99,"development.unspecified","Os06g0332800","Transcript","weakly similar to ( 112) AT3G47650 | Symbols: | bundle-sheath defective protein 2 family / bsd2 family | chr3:17569576-17570262 FORWARD protein|bundle sheath defective protein 2, putative, expressed",1.6800913]
[null,33.99,"development.unspecified","Os02g0623300","Transcript","weakly similar to ( 165) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 131) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|no apical meristem protein, putative, expressed",3.0280483]
[null,33.99,"development.unspecified","Os01g0833000","Transcript","highly similar to ( 560) AT5G39980 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:16001036-16003072 REVERSEweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.97713]
[null,33.99,"development.unspecified","Os06g0708700","Transcript","moderately similar to ( 324) AT3G45870 | Symbols: | integral membrane family protein / nodulin MtN21-related | chr3:16867633-16868838 FORWARD protein|integral membrane protein, putative, expressed",2.1390414]
[null,33.99,"development.unspecified","Os01g0826900","Transcript","highly similar to ( 783) AT3G56140 | Symbols: | unknown protein | chr3:20829407-20832669 FORWARDDUF399 protein|expressed protein",1.6502084]
[null,33.99,"development.unspecified","Os03g0597200","Transcript","highly similar to ( 786) AT3G53700 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest 40) | chr3:19900303-19902567 FORWARDmoderately similar to ( 303) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",1.4445262]
[null,33.99,"development.unspecified","Os06g0128400","Transcript","highly similar to ( 692) AT3G56990 | Symbols: EDA7 | EDA7 (embryo sac development arrest 7) | chr3:21088358-21091976 REVERSE protein|NUC153 domain containing protein, expressed",-1.4244264]
[null,33.99,"development.unspecified","Os06g0107750","Transcript","moderately similar to ( 208) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|nodulin, putative, expressed",-1.9533561]
[null,33.99,"development.unspecified","Os01g0217000","Transcript","moderately similar to ( 385) AT1G29050 | Symbols: | unknown protein | chr1:10136376-10139082 REVERSEDUF231 protein|powdery mildew resistant protein 5, putative, expressed",1.8833987]
[null,33.99,"development.unspecified","Os01g0823500","Transcript","weakly similar to ( 102) AT1G06920 | Symbols: ATOFP4, OFP4 | OFP4 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4) | chr1:2124854-2125801 REVERSEDUF623 protein|DUF623 domain containing protein, expressed",2.3226073]
[null,33.99,"development.unspecified","Os06g0725000","Transcript","weakly similar to ( 160) AT4G35770 | Symbols: SEN1, ATSEN1, DIN1 | SEN1 (SENESCENCE 1) | chr4:16945073-16945964 FORWARDweakly similar to ( 157) DIN1_RAPSA Senescence-associated protein DIN1 - Raphanus sativus (Radish) RHOD RHOD protein|rhodanese-like domain containing protein, putative, expressed",3.0041504]
[null,33.99,"development.unspecified","Os03g0843500","Transcript","moderately similar to ( 429) AT5G17440 | Symbols: | LUC7 N_terminus domain-containing protein | chr5:5749849-5753415 FORWARD LUC7 LUC7 protein|RNA-binding protein Luc7-like, putative, expressed",1.9870229]
[null,33.99,"development.unspecified","Os06g0275000","Transcript","weakly similar to ( 199) AT3G02380 | Symbols: COL2 | COL2 (constans-like 2); transcription factor/ zinc ion binding | chr3:487438-488624 REVERSECCT protein|CCT/B-box zinc finger protein, putative, expressed",-1.0695515]
[null,33.99,"development.unspecified","Os10g0422600","Transcript","very weakly similar to (81.3) AT2G25690 | Symbols: | senescence-associated protein-related | chr2:10940530-10941649 REVERSE protein|DUF581 domain containing protein, expressed",2.5280125]
[null,33.99,"development.unspecified","Os03g0115300","Transcript","highly similar to ( 521) AT3G53170 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glutamine biosynthetic process; LOCATED IN: nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G48730.1); Has 17188 Blast hits to 5538 proteins in 167 species: Archae - 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants - 16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI BLink). | chr3:19704729-19706417 REVERSEweakly similar to ( 131) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",2.1379328]
[null,33.99,"development.unspecified","Os02g0750400","Transcript","highly similar to ( 569) AT4G39620 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) | chr4:18395294-18397578 FORWARDweakly similar to ( 137) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.5473924]
[null,33.99,"development.unspecified","Os08g0191900","Transcript","highly similar to ( 670) AT3G59040 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:21821495-21824233 REVERSEweakly similar to ( 138) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.335797]
[null,33.99,"development.unspecified","Os06g0172000","Transcript","highly similar to ( 563) AT5G48730 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:19763152-19765136 FORWARDweakly similar to ( 119) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat domain containing protein, putative, expressed",1.6701217]
[null,33.99,"development.unspecified","Os03g0799100","Transcript","weakly similar to ( 107) AT1G54460 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | chr1:20340907-20342900 REVERSE protein|seed specific protein Bn15D14A, putative, expressed",1.0220655]
[null,33.99,"development.unspecified","Os11g0149400","Transcript","very weakly similar to (98.6) PSK2_ORYSA Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] - Oryza sativa (Rice) protein|phytosulfokines precursor, putative, expressed",2.3102272]
[null,33.99,"development.unspecified","Os05g0563000","Transcript","moderately similar to ( 332) AT4G28500 | Symbols: ANAC073, SND2 | ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73); transcription activator/ transcription factor | chr4:14083014-14084266 FORWARDNAM protein|no apical meristem protein, putative, expressed",3.2179844]
[null,33.99,"development.unspecified","Os01g0852900","Transcript","highly similar to ( 551) AT3G09060 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2766367-2768430 REVERSEmoderately similar to ( 275) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.3285623]
[null,33.99,"development.unspecified","Os06g0109200","Transcript","moderately similar to ( 245) AT3G30340 | Symbols: | nodulin MtN21 family protein | chr3:11956626-11958969 FORWARD protein|auxin-induced protein 5NG4, putative, expressed",3.9187546]
[null,33.99,"development.unspecified","Os01g0117900","Transcript","moderately similar to ( 381) AT3G18200 | Symbols: | nodulin MtN21 family protein | chr3:6234509-6235531 REVERSE protein|auxin-induced protein 5NG4, putative, expressed",2.3783941]
[null,33.99,"development.unspecified","Os10g0477600","Transcript","moderately similar to ( 237) AT4G28530 | Symbols: anac074 | anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | chr4:14090725-14094603 REVERSEweakly similar to ( 177) NAC77_ORYSA NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",1.9038072]
[null,33.99,"development.unspecified","Os05g0442700","Transcript","weakly similar to ( 191) AT5G22380 | Symbols: anac090 | anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | chr5:7408924-7410038 REVERSEweakly similar to ( 116) NAC71_ORYSA NAC domain-containing protein 71 (ONAC071) - Oryza sativa (Rice)NAM protein|No apical meristem protein, putative, expressed",-1.5360001]
[null,33.99,"development.unspecified","Os01g0254100","Transcript","nearly identical (1576) AT3G16830 | Symbols: TPR2 | TPR2 (TOPLESS-RELATED 2) | chr3:5731709-5737531 FORWARD WD40 COG2319 protein|lissencephaly type-1-like homology motif, putative, expressed",-1.1587647]
[null,33.99,"development.unspecified","Os12g0178633","Transcript","moderately similar to ( 423) AT5G54200 | Symbols: | WD-40 repeat family protein | chr5:21993565-21997076 REVERSE WD40 COG2319 protein|WD-40 repeat family protein, putative, expressed",1.3121089]
[null,33.99,"development.unspecified","Os02g0734500","Transcript","weakly similar to ( 102) AT1G70670 | Symbols: | caleosin-related family protein | chr1:26644830-26645970 FORWARDCaleosin protein|caleosin related protein, putative, expressed",-1.1643081]
[null,33.99,"development.unspecified","Os01g0675800","Transcript","protein|no apical meristem protein, putative, expressed",-1.7036854]
[null,33.99,"development.unspecified","Os03g0151700","Transcript","highly similar to ( 990) AT3G21540 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:7586100-7590856 REVERSE Utp12 WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0246056]
[null,33.99,"development.unspecified","Os01g0776400","Transcript","highly similar to ( 520) AT2G16405 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:7105915-7108787 REVERSE WD40 protein|WD domain, G-beta repeat domain containing protein, expressed",-0.9476285]
[null,33.99,"development.unspecified","Os07g0525100","Transcript","moderately similar to ( 236) AT5G64700 | Symbols: | nodulin MtN21 family protein | chr5:25865190-25866845 REVERSE protein|integral membrane protein DUF6 containing protein, expressed",1.456244]
[null,33.99,"development.unspecified","Os03g0640100","Transcript","highly similar to ( 750) AT5G58230 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | chr5:23556112-23557994 FORWARD WD40 COG2319 protein|WD domain, G-beta repeat domain containing protein, expressed",-1.0269638]
[null,33.99,"development.unspecified","Os09g0423300","Transcript","highly similar to ( 878) AT4G30825 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:15009605-15012319 FORWARDweakly similar to ( 154) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",3.2283523]
[]
[null,34,"transport","Os09g0346400","Transcript","moderately similar to ( 270) AT4G27500 | Symbols: PPI1 | PPI1 (PROTON PUMP INTERACTOR 1); protein binding | chr4:13743614-13745900 FORWARD protein|proton pump interactor, putative, expressed",-1.2646421]
[null,34.1,"transport.p- and v-ATPases","Os03g0100800","Transcript","nearly identical (1389) AT5G62670 | Symbols: AHA11 | AHA11 (Arabidopsis H(+)-ATPase 11); ATPase | chr5:25159495-25164957 FORWARDnearly identical (1397) PMA1_NICPL Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) MgtA PRK10517 ZntA E1-E2_ATPase KdpB PRK01122 zntA PRK10671 protein|E1-E2 ATPase domain containing protein, expressed",3.1755283]
[null,34.1,"transport.p- and v-ATPases","Os05g0100600","Transcript","nearly identical (1536) AT3G25610 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr3:9308942-9313353 REVERSE MgtA protein|phospholipid-transporting ATPase, putative, expressed",-1.4096457]
[null,"34.1.1.3","transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D","Os04g0643100","Transcript","moderately similar to ( 360) AT3G58730 | Symbols: | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | chr3:21718495-21719280 REVERSE ATP-synt_D NtpD PRK00373 protein|vacuolar ATP synthase subunit D 1, putative, expressed",-1.5294367]
[null,34.2,"transport.sugars","Os03g0137500","Transcript","moderately similar to ( 268) AT5G57490 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel | chr5:23283895-23285335 REVERSEmoderately similar to ( 236) VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) Porin_3 protein|outer mitochondrial membrane porin, putative, expressed",-1.0140386]
[null,34.2,"transport.sugars","Os03g0363500","Transcript","moderately similar to ( 493) AT5G18840 | Symbols: | sugar transporter, putative | chr5:6282954-6286399 FORWARDweakly similar to ( 140) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",2.3389091]
[null,34.2,"transport.sugars","Os02g0573500","Transcript","moderately similar to ( 458) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 444) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.4872049]
[null,34.2,"transport.sugars","Os04g0452700","Transcript","highly similar to ( 509) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 465) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.9885241]
[null,34.2,"transport.sugars","Os02g0604300","Transcript","highly similar to ( 571) AT3G59360 | Symbols: UTR6, ATUTR6 | UTR6 (UDP-GALACTOSE TRANSPORTER 6); nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter | chr3:21935826-21939642 REVERSE Nuc_sug_transp protein|nucleotide-sugar transporter family protein, putative, expressed",-0.9878022]
[null,34.2,"transport.sugars","Os04g0454200","Transcript","moderately similar to ( 467) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 435) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",6.1641135]
[null,34.2,"transport.sugars","Os03g0197100","Transcript","highly similar to ( 567) AT3G18830 | Symbols: ATPLT5 | ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ mann | chr3:6489000-6491209 REVERSEweakly similar to ( 158) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",4.3881907]
[null,34.2,"transport.sugars","Os09g0361500","Transcript","highly similar to ( 523) AT1G18870 | Symbols: ICS2 | ICS2 (ISOCHORISMATE SYNTHASE 2); isochorismate synthase | chr1:6515746-6519176 FORWARDhighly similar to ( 504) VDAC1_ORYSA Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Oryza sativa (Rice) Porin_3 MenF PRK07054 Chorismate_bind TrpE PRK06923 PRK06404 PRK05940 PRK09070 protein|isochorismate synthase 1, chloroplast precursor, putative, expressed",3.756293]
[null,34.2,"transport.sugars","Os04g0453300","Transcript","moderately similar to ( 454) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 418) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",3.7789395]
[null,34.2,"transport.sugars","Os03g0218400","Transcript","highly similar to ( 757) AT5G26340 | Symbols: MSS1, STP13 | MSS1; carbohydrate transmembrane transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose symporter/ sugar:hydrogen symporter | chr5:9243851-9246994 REVERSEhighly similar to ( 515) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-1.771308]
[null,34.2,"transport.sugars","Os05g0567800","Transcript","highly similar to ( 614) AT1G75220 | Symbols: | integral membrane protein, putative | chr1:28229412-28232606 REVERSEweakly similar to ( 145) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",1.4334122]
[null,34.2,"transport.sugars","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,34.2,"transport.sugars","Os02g0574100","Transcript","moderately similar to ( 403) AT1G34580 | Symbols: | monosaccharide transporter, putative | chr1:12660631-12663553 FORWARDmoderately similar to ( 382) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE protein|transporter family protein, putative, expressed",-3.042162]
[null,34.2,"transport.sugars","Os04g0511400","Transcript","highly similar to ( 696) AT1G30220 | Symbols: ATINT2, INT2 | INT2 (INOSITOL TRANSPORTER 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | chr1:10632957-10635439 REVERSEweakly similar to ( 157) STC_RICCO Sugar carrier protein C - Ricinus communis (Castor bean) Sugar_tr xylE PRK03893 protein|transporter family protein, putative, expressed",2.9151828]
[null,"34.2.1","transport.sugars.sucrose","Os03g0170900","Transcript","moderately similar to ( 491) AT2G02860 | Symbols: SUT2, ATSUC3, SUC3, ATSUT2 | SUT2 (SUCROSE TRANSPORTER 2); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | chr2:828546-832296 REVERSEmoderately similar to ( 308) SUT2_ORYSA Sucrose transport protein 2 (Sucrose permease 2) (Sucrose-proton symporter 2) (Sucrose transporter 2) (SUC4-like protein) - Oryza sativa (Rice) protein|sucrose transporter, putativ, expressed",0.96311694]
[null,34.3,"transport.amino acids","Os02g0802500","Transcript","nearly identical (1208) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDnearly identical (1237) AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",-1.7631084]
[null,34.3,"transport.amino acids","Os01g0337500","Transcript","highly similar to ( 941) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDhighly similar to ( 943) AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",-1.0808805]
[null,34.3,"transport.amino acids","Os03g0654400","Transcript","highly similar to ( 732) AT1G58030 | Symbols: CAT2 | CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid transmembrane transporter | chr1:21464185-21468141 REVERSE PotE AA_permease AnsP LysP PRK11357 PRK10836 PRK11387 PRK10238 PRK10580 PRK10249 protein|amino acid permease, putative, expressed",2.8374507]
[null,34.3,"transport.amino acids","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767]
[null,34.3,"transport.amino acids","Os01g0621200","Transcript","highly similar to ( 560) AT5G41800 | Symbols: | amino acid transporter family protein | chr5:16733842-16735888 FORWARD Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",3.1615722]
[null,34.3,"transport.amino acids","Os12g0194900","Transcript","moderately similar to ( 318) AT5G49630 | Symbols: AAP6 | AAP6 (AMINO ACID PERMEASE 6); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | chr5:20142681-20146441 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",-2.0046668]
[null,34.3,"transport.amino acids","Os04g0460300","Transcript","moderately similar to ( 353) AT3G28960 | Symbols: | amino acid transporter family protein | chr3:10984245-10985767 REVERSE Aa_trans SdaC protein|transmembrane amino acid transporter protein, putative, expressed",2.7348843]
[null,34.3,"transport.amino acids","Os03g0641200","Transcript","highly similar to ( 536) AT4G21120 | Symbols: AAT1, CAT1 | AAT1 (AMINO ACID TRANSPORTER 1); L-glutamate transmembrane transporter/ L-lysine transmembrane transporter/ arginine transmembrane transporter/ cationic amino acid transmembrane transporter | chr4:11270318-11273775 FORWARD PotE protein|amino acid permease family protein, putative, expressed",1.3785769]
[null,34.3,"transport.amino acids","Os01g0878700","Transcript","moderately similar to ( 466) AT1G44100 | Symbols: AAP5 | AAP5; amino acid transmembrane transporter/ basic amino acid transmembrane transporter | chr1:16764651-16767223 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",2.1816192]
[null,34.3,"transport.amino acids","Os02g0184200","Transcript","nearly identical (1168) AT1G15690 | Symbols: AVP1, ATAVP3, AVP-3 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase | chr1:5399115-5402185 FORWARDnearly identical (1169) AVP_PHAAU Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata)H_PPase hppA OVP1 protein|inorganic H+ pyrophosphatase, putative, expressed",1.7219385]
[null,34.3,"transport.amino acids","Os05g0447200","Transcript","highly similar to ( 711) AT2G38120 | Symbols: AUX1, WAV5, PIR1, MAP1 | AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter | chr2:15973493-15976792 FORWARDhighly similar to ( 865) LAX2_ORYSA Auxin transporter-like protein 2 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",1.2837814]
[null,34.3,"transport.amino acids","Os12g0195100","Transcript","highly similar to ( 539) AT1G77380 | Symbols: AAP3, ATAAP3 | AAP3; amino acid transmembrane transporter | chr1:29075201-29077252 REVERSE Aa_trans protein|amino acid transporter, putative, expressed",1.0777216]
[null,34.4,"transport.nitrate","Os01g0547600","Transcript","moderately similar to ( 271) AT1G12940 | Symbols: ATNRT2.5 | ATNRT2.5 (nitrate transporter2.5); nitrate transmembrane transporter | chr1:4416405-4418337 FORWARDNarK protein|transporter, major facilitator family, putative, expressed",-1.1524473]
[null,34.5,"transport.ammonium","Os04g0509600","Transcript","highly similar to ( 635) AT4G13510 | Symbols: AMT1;1, ATAMT1, ATAMT1;1 | AMT1;1 (AMMONIUM TRANSPORTER 1;1); ammonium transmembrane transporter | chr4:7858220-7859725 FORWARD Ammonium_transp AmtB PRK10666 protein|ammonium transporter protein, putative, expressed",-1.0550585]
[null,34.6,"transport.sulphate","Os04g0652400","Transcript","highly similar to ( 849) AT1G23090 | Symbols: AST91, SULTR3;3 | AST91 (SULFATE TRANSPORTER 91); sulfate transmembrane transporter | chr1:8185238-8188954 REVERSEmoderately similar to ( 341) NO70_SOYBN Early nodulin 70 - Glycine max (Soybean) Sulfate_transp SUL1 PRK11660 STAS protein|sulfate transporter, putative, expressed",-1.3742207]
[null,34.7,"transport.phosphate","Os01g0852200","Transcript","moderately similar to ( 459) AT3G46980 | Symbols: PHT4;3 | transporter-related | chr3:17307294-17309899 REVERSE protein|transporter, major facilitator family, putative, expressed",1.6583257]
[null,34.7,"transport.phosphate","Os02g0593500","Transcript","moderately similar to ( 301) AT3G26570 | Symbols: PHT2;1, ORF02 | PHT2;1 (PHOSPHATE TRANSPORTER 2;1); low affinity phosphate transmembrane transporter | chr3:9756416-9758413 FORWARD PHO4 PitA protein|inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed",3.7982666]
[null,34.8,"transport.metabolite transporters at the envelope membrane","Os01g0239200","Transcript","moderately similar to ( 481) AT5G46110 | Symbols: APE2, TPT | APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2); antiporter/ triose-phosphate transmembrane transporter | chr5:18697606-18700223 FORWARDmoderately similar to ( 491) TPT_MAIZE Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Zea mays (Maize) TPT protein|DUF250 domain containing protein, putative, expressed",4.076439]
[null,34.8,"transport.metabolite transporters at the envelope membrane","Os05g0241200","Transcript","moderately similar to ( 498) AT5G46110 | Symbols: APE2, TPT | APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2); antiporter/ triose-phosphate transmembrane transporter | chr5:18697606-18700223 FORWARDmoderately similar to ( 496) TPT_SPIOL Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E29) - Spinacia oleracea (Spinach) TPT protein|phosphate/phosphate translocator, putative, expressed",3.0902479]
[null,34.8,"transport.metabolite transporters at the envelope membrane","Os04g0602400","Transcript","moderately similar to ( 357) AT5G17520 | Symbols: RCP1, MEX1 | RCP1 (ROOT CAP 1); maltose transmembrane transporter | chr5:5772796-5775231 REVERSEhighly similar to ( 583) MEX1_ORYSA Maltose excess protein 1-like, chloroplast precursor - Oryza sativa (Rice) protein|maltose excess protein 1-like, chloroplast precursor, putative, expressed",1.453833]
[null,34.8,"transport.metabolite transporters at the envelope membrane","Os05g0494500","Transcript","moderately similar to ( 443) AT5G11230 | Symbols: | organic anion transmembrane transporter | chr5:3580562-3581617 FORWARD TPT protein|domain of unknown function, DUF250 domain containing protein, expressed",-0.96053505]
[null,34.8,"transport.metabolite transporters at the envelope membrane","Os01g0172100","Transcript","moderately similar to ( 326) AT5G33320 | Symbols: CUE1, PPT, ARAPPT | CUE1 (CAB UNDEREXPRESSED 1); antiporter/ triose-phosphate transmembrane transporter | chr5:12588950-12591408 FORWARDweakly similar to ( 173) TPT_PEA Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) TPT protein|phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed",-1.2750273]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os09g0444700","Transcript","moderately similar to ( 241) AT1G72820 | Symbols: | mitochondrial substrate carrier family protein | chr1:27403457-27404506 FORWARD protein|mitochondrial carrier protein, putative, expressed",-1.3908076]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os08g0481800","Transcript","highly similar to ( 698) AT5G64290 | Symbols: DCT, DIT2.1 | DIT2.1 (DICARBOXYLATE TRANSPORT 2.1); oxoglutarate:malate antiporter | chr5:25714495-25716642 REVERSEmoderately similar to ( 407) SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach)Na_sulph_symp CitT ArsB_NhaD_permease protein|citrate transporter, putative, expressed",1.0410608]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os09g0454600","Transcript","moderately similar to ( 404) AT3G48850 | Symbols: | mitochondrial phosphate transporter, putative | chr3:18114759-18116420 REVERSE protein|phosphate carrier protein, mitochondrial precursor, putative, expressed",-2.1220448]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0392700","Transcript","moderately similar to ( 358) AT3G05290 | Symbols: PNC1 | PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1); ADP transmembrane transporter/ ATP transmembrane transporter/ binding | chr3:1506129-1507614 REVERSE protein|mitochondrial carrier protein, putative, expressed",-1.0978266]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os03g0296800","Transcript","moderately similar to ( 227) AT1G07030 | Symbols: | mitochondrial substrate carrier family protein | chr1:2158631-2160524 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.1860336]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0361900","Transcript","moderately similar to ( 366) AT4G39460 | Symbols: SAMC1, SAMT1 | SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding | chr4:18356093-18358596 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",1.9424101]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os03g0267700","Transcript","moderately similar to ( 410) AT3G53940 | Symbols: | mitochondrial substrate carrier family protein | chr3:19971258-19973564 REVERSEweakly similar to ( 140) BT1_MAIZE Protein brittle-1, chloroplast precursor - Zea mays (Maize) Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.0052853]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os05g0208000","Transcript","moderately similar to ( 474) AT5G19760 | Symbols: | dicarboxylate/tricarboxylate carrier (DTC) | chr5:6679591-6681845 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-0.95735836]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os10g0573800","Transcript","moderately similar to ( 361) AT5G46800 | Symbols: BOU | BOU (A BOUT DE SOUFFLE); binding / transporter | chr5:18988779-18989810 REVERSE Mito_carr protein|mitochondrial carrier protein, putative, expressed",-1.8643912]
[null,34.9,"transport.metabolite transporters at the mitochondrial membrane","Os01g0623200","Transcript","highly similar to ( 538) AT4G27970 | Symbols: SLAH2 | SLAH2 (SLAC1 HOMOLOGUE 2); transporter | chr4:13918290-13920122 REVERSEC4dic_mal_tran TehA PRK10764 protein|C4-dicarboxylate transporter/malic acid transport protein, expressed",-1.4254503]
[null,34.1,"transport.nucleotides","Os04g0587300","Transcript","moderately similar to ( 311) AT1G44750 | Symbols: ATPUP11 | ATPUP11; purine transmembrane transporter | chr1:16894257-16895168 FORWARDTPT protein|purine permease, putative, expressed",-2.0073464]
[null,34.1,"transport.nucleotides","Os01g0680200","Transcript","weakly similar to ( 167) AT1G30840 | Symbols: ATPUP4 | ATPUP4; purine transmembrane transporter | chr1:10974581-10975729 FORWARD protein|purine permease, putative, expressed",2.1909852]
[null,34.1,"transport.nucleotides","Os02g0689200","Transcript","moderately similar to ( 338) AT1G44750 | Symbols: ATPUP11 | ATPUP11; purine transmembrane transporter | chr1:16894257-16895168 FORWARDTPT protein|purine permease, putative, expressed",-1.1932411]
[null,34.11,"transport.NDP-sugars at the ER","Os03g0118200","Transcript","highly similar to ( 506) AT4G23010 | Symbols: ATUTR2, UTR2 | UDP-galactose transporter-related | chr4:12060318-12062486 REVERSE UAA protein|transporter family protein, putative, expressed",4.9018173]
[null,34.11,"transport.NDP-sugars at the ER","Os12g0154600","Transcript","moderately similar to ( 417) AT4G09810 | Symbols: | transporter-related | chr4:6175415-6176892 REVERSE TPT protein|transporter-related, putative, expressed",-1.0611993]
[null,34.12,"transport.metal","Os01g0972200","Transcript","moderately similar to ( 330) AT5G59520 | Symbols: ZIP2 | ZIP2; copper ion transmembrane transporter/ transferase, transferring glycosyl groups / zinc ion transmembrane transporter | chr5:23991447-23992762 REVERSE Zip protein|metal cation transporter, putative, expressed",1.5007988]
[null,34.12,"transport.metal","Os12g0616500","Transcript","highly similar to ( 833) AT3G17630 | Symbols: ATCHX19, CHX19 | ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | chr3:6029201-6031773 FORWARD KefB Na_H_Exchanger PRK03562 PRK03659 protein|ATCHX, putative, expressed",-1.3152285]
[null,34.12,"transport.metal","Os08g0533900","Transcript","weakly similar to ( 129) AT1G55910 | Symbols: ZIP11 | ZIP11 (ZINC TRANSPORTER 11 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter | chr1:20906161-20907225 FORWARD protein|zinc transporter 2 precursor, putative, expressed",1.1322465]
[null,34.12,"transport.metal","Os03g0667500","Transcript","moderately similar to ( 305) AT1G31260 | Symbols: ZIP10 | ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter | chr1:11175559-11177362 REVERSE Zip protein|metal cation transporter, putative, expressed",1.4625627]
[null,34.12,"transport.metal","Os06g0542300","Transcript","protein|heavy metal-associated domain containing protein, expressed",-2.0765414]
[null,34.12,"transport.metal","Os03g0178100","Transcript","highly similar to ( 882) AT5G21930 | Symbols: PAA2, HMA8 | PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr5:7243129-7248721 FORWARD ZntA PRK10671 zntA E1-E2_ATPase MgtA KdpB PRK01122 PRK10517 protein|copper-transporting ATPase PAA1, putative, expressed",1.0289048]
[null,34.12,"transport.metal","Os05g0472400","Transcript","moderately similar to ( 242) AT1G05300 | Symbols: ZIP5 | ZIP5; cation transmembrane transporter/ metal ion transmembrane transporter | chr1:1546161-1547709 REVERSE Zip protein|metal cation transporter, putative, expressed",2.9450293]
[null,34.12,"transport.metal","Os07g0258400","Transcript","highly similar to ( 523) AT1G80830 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter | chr1:30373066-30375644 REVERSE Nramp PRK00701 MntH protein|metal transporter Nramp6, putative, expressed",-2.169833]
[null,34.12,"transport.metal","Os03g0156700","Transcript","moderately similar to ( 296) AT4G35080 | Symbols: | high-affinity nickel-transport family protein | chr4:16698384-16700012 FORWARD protein|high-affinity nickel-transport family protein, putative, expressed",-1.1017166]
[null,34.13,"transport.peptides and oligopeptides","Os06g0705700","Transcript","highly similar to ( 506) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter, putative, expressed",1.3933941]
[null,34.13,"transport.peptides and oligopeptides","Os03g0116000","Transcript","moderately similar to ( 243) AT2G46470 | Symbols: OXA1L | OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) | chr2:19072659-19074948 FORWARD YidC PRK02944 60KD_IMP PRK01622 PRK00145 protein|inner membrane protein, putative, expressed",-1.582964]
[null,34.13,"transport.peptides and oligopeptides","Os06g0125500","Transcript","nearly identical (1085) AT4G10770 | Symbols: ATOPT7, OPT7 | OPT7 (OLIGOPEPTIDE TRANSPORTER 7); oligopeptide transporter | chr4:6628646-6632517 REVERSE OPT protein|oligopeptide transporter, putative, expressed",-1.4356852]
[null,34.13,"transport.peptides and oligopeptides","Os01g0902700","Transcript","highly similar to ( 542) AT3G54140 | Symbols: ATPTR1, PTR1 | PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter | chr3:20045885-20048154 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.2975117]
[null,34.13,"transport.peptides and oligopeptides","Os07g0603800","Transcript","moderately similar to ( 462) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",-1.1091557]
[null,34.13,"transport.peptides and oligopeptides","Os10g0110600","Transcript","moderately similar to ( 493) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",2.1132662]
[null,34.13,"transport.peptides and oligopeptides","Os10g0109900","Transcript","highly similar to ( 510) AT1G62200 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:22982147-22984334 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",3.2013302]
[null,34.13,"transport.peptides and oligopeptides","Os10g0110800","Transcript","moderately similar to ( 357) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",3.2314777]
[null,34.13,"transport.peptides and oligopeptides","Os03g0235700","Transcript","highly similar to ( 736) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.6259762]
[null,34.13,"transport.peptides and oligopeptides","Os03g0235900","Transcript","weakly similar to ( 192) AT2G02020 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr2:479117-481131 FORWARD PTR2 protein|peptide transporter PTR2, putative, expressed",1.3953772]
[null,34.13,"transport.peptides and oligopeptides","Os10g0111700","Transcript","highly similar to ( 535) AT2G02040 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | chr2:487542-489707 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",5.1882243]
[null,34.13,"transport.peptides and oligopeptides","Os10g0554200","Transcript","highly similar to ( 633) AT1G12110 | Symbols: NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | NRT1.1; nitrate transmembrane transporter/ transporter | chr1:4105341-4109290 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",1.6377968]
[null,34.13,"transport.peptides and oligopeptides","Os01g0872600","Transcript","moderately similar to ( 468) AT1G22540 | Symbols: | proton-dependent oligopeptide transport (POT) family protein | chr1:7964202-7966222 FORWARD PTR2 PTR2 protein|proton-dependent oligopeptide transport, putative, expressed",5.1984105]
[null,34.13,"transport.peptides and oligopeptides","Os01g0142800","Transcript","highly similar to ( 787) AT3G54140 | Symbols: ATPTR1, PTR1 | PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter | chr3:20045885-20048154 REVERSE PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",-1.0931097]
[null,34.13,"transport.peptides and oligopeptides","Os03g0103000","Transcript","highly similar to ( 516) AT1G12110 | Symbols: NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1 | NRT1.1; nitrate transmembrane transporter/ transporter | chr1:4105341-4109290 FORWARD PTR2 PTR2 protein|peptide transporter PTR2, putative, expressed",4.486815]
[null,34.14,"transport.unspecified cations","Os10g0580400","Transcript","highly similar to ( 900) AT5G45380 | Symbols: ATDUR3, DUR3 | sodium:solute symporter family protein | chr5:18391337-18395696 FORWARD PutP SSF protein|urea active transporter, putative, expressed",-2.238878]
[null,34.14,"transport.unspecified cations","Os02g0465900","Transcript","moderately similar to ( 201) AT4G31290 | Symbols: | ChaC-like family protein | chr4:15186851-15188278 FORWARD ChaC protein|cation transport regulator-like protein 1, putative, expressed",1.8619734]
[null,34.14,"transport.unspecified cations","Os09g0484900","Transcript","highly similar to ( 661) AT5G47560 | Symbols: ATTDT, ATSDAT, TDT | TDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transmembrane transporter/ sodium:dicarboxylate symporter | chr5:19287895-19290347 REVERSE SLC13_permease CitT Na_sulph_symp ArsB_NhaD_permease protein|citrate transporter, putative, expressed",-1.9309164]
[null,34.14,"transport.unspecified cations","Os01g0869200","Transcript","moderately similar to ( 244) AT3G19640 | Symbols: | magnesium transporter CorA-like family protein (MRS2-3) | chr3:6820969-6823104 FORWARD CorA protein|CorA-like magnesium transporter protein, putative, expressed",-1.547753]
[null,34.14,"transport.unspecified cations","Os08g0130000","Transcript","moderately similar to ( 379) AT2G04305 | Symbols: | magnesium transporter CorA-like protein-related | chr2:1501679-1503448 REVERSECorA protein|expressed protein",1.0199447]
[null,34.14,"transport.unspecified cations","Os01g0645200","Transcript","highly similar to ( 539) AT2G26900 | Symbols: | bile acid:sodium symporter family protein | chr2:11475156-11477870 REVERSE COG0385 SBF protein|bile acid sodium symporter family protein, putative, expressed",3.1301339]
[null,34.15,"transport.potassium","Os07g0108800","Transcript","moderately similar to ( 286) AT5G55630 | Symbols: KCO1, TPK1 | ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel | chr5:22531718-22532893 FORWARD protein|potassium channel protein, putative, expressed",-1.329872]
[null,34.15,"transport.potassium","Os09g0376900","Transcript","nearly identical (1108) AT1G60160 | Symbols: | potassium transporter family protein | chr1:22188330-22191395 REVERSEhighly similar to ( 798) HAK14_ORYSA Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-1.3946184]
[null,34.15,"transport.potassium","Os01g0930400","Transcript","highly similar to ( 787) AT4G13420 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+ TRANSPORTER 5); potassium ion transmembrane transporter/ potassium:sodium symporter | chr4:7797038-7802174 REVERSEhighly similar to ( 803) HAK1_ORYSA Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-2.081079]
[null,34.15,"transport.potassium","Os07g0509200","Transcript","nearly identical (1002) AT5G09400 | Symbols: KUP7 | KUP7; potassium ion transmembrane transporter | chr5:2916377-2920604 FORWARDnearly identical (1461) HAK14_ORYSA Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-1.1306559]
[null,34.15,"transport.potassium","Os06g0671000","Transcript","highly similar to ( 748) AT2G30070 | Symbols: ATKT1, ATKT1P, ATKUP1, KUP1 | ATKT1 (POTASSIUM TRANSPORTER 1); potassium ion transmembrane transporter | chr2:12835097-12838466 FORWARDnearly identical (1386) HAK13_ORYSA Probable potassium transporter 13 (OsHAK13) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",3.334135]
[null,34.15,"transport.potassium","Os03g0574900","Transcript","highly similar to ( 689) AT4G13420 | Symbols: HAK5, ATHAK5 | HAK5 (HIGH AFFINITY K+ TRANSPORTER 5); potassium ion transmembrane transporter/ potassium:sodium symporter | chr4:7797038-7802174 REVERSEnearly identical (1016) HAK16_ORYSA Probable potassium transporter 16 (OsHAK16) - Oryza sativa (Rice)K_trans Kup trkD protein|potassium transporter, putative, expressed",-2.2830698]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0190300","Transcript","nearly identical (1597) AT3G28345 | Symbols: | ABC transporter family protein | chr3:10593921-10598775 REVERSEnearly identical (2187) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB SunT ABCC_MsbA PRK11176 ABCC_ATM1_transporter ABCC_Glucan_exporter_like ATM1 ABCC_TAP ABCC_Hemolysin CydD PRK10789 ABCC_MRP_Like ABCC_bacteriocin_exporters PRK11160 CydC PRK11174 ABCC_MRP_domain2 ArpD PRK10790 AbcC ABCC_NFT1 ABCC_Protease_Secretion ABC_PstB_phosphate_transporter ABC_MetN_methionine_transporter ABC_cobalt_CbiO_domain1 ABC_tran ABCC_MRP_domain1 ABCC_SUR2 ABCC_cytochrome_bd ABC_Carb_Solutes_like CcmA ABC_Org_Solvent_Resistant FepC GlnQ PstB SalX ABC_MJ0796_Lo1CDE_FtsE PotA COG1123 CbiO ABC_Pro_Gly_Bertaine OpuBA ABC_membrane TauB ABC_Class3 ABC_OpuCA_Osmoprotection ABC_NrtD_SsuB_transporters Ttg2A ABC_NikE_OppD_transporters MalK DppF COG3638 ABC_HisP_GlnQ_permeases ABC_PotA_N ProV ABC_ModC_molybdenum_transporter ABC_PhnC_transporter ABC_DR_subfamily_A ABC_Iron-Siderophores_B12_Hemin ABC_subfamily_A CysA potA AppF ABC_Mj1267_LivG_branched glnQ MglA metN NatA ABC_FtsE_transporter DppD ABC_CysA_sulfate_importer FtsE ABC_TM1139_LivF_branched ABC_ModC_like ZnuC ThiQ LivG ABC_ATPase dppF ABC_drug_resistance_like ABC_cobalt_CbiO_domain2 PRK10070 COG4619 COG3845 fecE COG4172 ABC_MalK_N TauB ABC_Metallic_Cations ABCG_EPDR HisP PRK11264 LivF ABCC_CFTR2 potG artP ABCC_SUR1_N PRK10744 CeuD ABC_NatA_sodium_exporter PRK10619 ModC fbpC ABCC_CFTR1 COG4181 COG4178 PRK10851 ArtP PhnK PvdE PRK10247 PRK10535 modC ABC_putative_ATPase PRK10522 ABC_YhbG TagH YhbG ABC_BcrA_bacitracin_resist thiQ Uup ABC_ThiQ_thiamine_transporter ABC_DrrA ModF sufC ABC_Carb_Monos_I ABCG_White ABC_KpsT_Wzt PRK10419 COG4559 araG btuD COG4136 PRK10762 PRK11831 PRK11000 PRK10575 ABC_FeS_Assembly tauB PRK10261 ssuB PRK10253 PRK10908 protein|multidrug resistance protein, putative, expressed",-2.1796088]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0826500","Transcript","nearly identical (1089) AT1G64550 | Symbols: ATGCN3 | ATGCN3; transporter | chr1:23968850-23973369 FORWARD Uup PRK10636 PRK11147 PRK11819 ABCF_EF-3 ABC_tran COG1123 FepC ZnuC CbiO ABCC_MRP_Like ABC_cobalt_CbiO_domain1 ABC_Iron-Siderophores_B12_Hemin ABC_Metallic_Cations ABC_ATPase CydD ABCC_Protease_Secretion ABC_Org_Solvent_Resistant znuC SalX SunT CcmA ABC_DR_subfamily_A Ttg2A ABC_MJ0796_Lo1CDE_FtsE COG3638 ModF ABCC_cytochrome_bd MdlB TauB CcmA ABC_cobalt_CbiO_domain2 ABC_KpsT_Wzt COG1245 DppF ArpD TagH ABCC_bacteriocin_exporters FtsE ABC_Class3 ABC_Carb_Solutes_like ABC_NrtD_SsuB_transporters ABC_PhnC_transporter ABCC_ATM1_transporter COG4586 ABC_Mj1267_LivG_branched ABC_ModC_molybdenum_transporter ABC_subfamily_A ABC_NatA_like ABC_BcrA_bacitracin_resist CysA CydC LivG PRK11160 protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0999418]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0904200","Transcript","moderately similar to ( 368) AT4G24810 | Symbols: | ABC1 family protein | chr4:12786791-12789598 REVERSE AarF ABC1 ubiB protein|ABC1 family domain containing protein, putative, expressed",1.3979836]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0356400","Transcript","nearly identical (1574) AT2G47800 | Symbols: ATMRP4, EST3 | ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4); ATPase, coupled to transmembrane movement of substances / folic acid transporter | chr2:19574944-19580383 FORWARDweakly similar to ( 142) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABCC_MRP_domain2 ABCC_MRP_domain1 MdlB ABCC_NFT1 SunT ABCC_SUR2 ABCC_Glucan_exporter_like ABCC_CFTR2 ABC_MTABC3_MDL1_MDL2 ABCC_SUR1_N ABCC_MRP_Like ABCC_MsbA ABCC_ATM1_transporter CydD PRK10790 ABCC_CFTR1 ABCC_bacteriocin_exporters CydC ABCC_Hemolysin ATM1 PRK11176 PRK11174 PRK11160 CcmA ABCC_TAP ABC_tran ABC_cobalt_CbiO_domain1 ABCC_Protease_Secretion AbcC ABCC_cytochrome_bd ABC_PstB_phosphate_transporter PRK10789 ABC_Metallic_Cations CbiO ZnuC ArpD ABC_Org_Solvent_Resistant FepC ABC_MetN_methionine_transporter ABC_NikE_OppD_transporters ABC_Carb_Solutes_like ABC_DR_subfamily_A ABC_membrane PotA ABC_MJ0796_Lo1CDE_FtsE ABC_NrtD_SsuB_transporters ABC_ATPase COG1123 ABC_Pro_Gly_Bertaine SalX TauB ABC_PhnC_transporter PstB MalK ABC_subfamily_A COG3638 OpuBA Ttg2A DppF ABC_Class3 MglA ABC_Iron-Siderophores_B12_Hemin ABC_cobalt_CbiO_domain2 GlnQ CysA ABC_TM1139_LivF_branched DppD ABC_OpuCA_Osmoprotection ProV ABC_Mj1267_LivG_branched LivF ABC_HisP_GlnQ_permeases COG4178 Uup ABC_ModC_like YhbG PRK10522 COG3845 metN COG4619 ABC_YhbG FtsE ABC_PotA_N ABC_drug_resistance_like ABC_MalK_N ABC_KpsT_Wzt ABC_CysA_sulfate_importer ABC_putative_ATPase PhnK ABC_BcrA_bacitracin_resist LivG NatA ABCG_White ABC_Carb_Monos_I AppF potA TagH btuD PvdE PRK10851 ABC_NatA_sodium_exporter ABC_Carb_Monos_II protein|multidrug resistance-associated protein, putative, expressed",-1.2572275]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os04g0459000","Transcript","nearly identical (1540) AT3G28860 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPGP19, ABCB19, ATABCB19 | ABCB19; ATPase, coupled to transmembrane movement of substances / auxin efflux transmembrane transporter | chr3:10870287-10877286 REVERSEhighly similar to ( 837) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB SunT ABCC_MsbA ABCC_ATM1_transporter ABCC_Glucan_exporter_like PRK11176 ATM1 ABCC_Hemolysin ABCC_TAP CydD ABCC_bacteriocin_exporters ABCC_MRP_Like CydC PRK10790 PRK11160 PRK10789 ArpD PRK11174 ABCC_MRP_domain2 AbcC ABC_PstB_phosphate_transporter PstB ABC_MetN_methionine_transporter PotA ABCC_Protease_Secretion ABC_cobalt_CbiO_domain1 ABC_Carb_Solutes_like ABC_OpuCA_Osmoprotection ABC_tran ABCC_cytochrome_bd OpuBA ABCC_NFT1 ABCC_MRP_domain1 ABC_Org_Solvent_Resistant CbiO ABC_Pro_Gly_Bertaine FepC ABC_NrtD_SsuB_transporters MalK COG1123 ABC_membrane DppF GlnQ TauB ABCC_SUR2 ABC_PotA_N ProV SalX ABC_NikE_OppD_transporters ABC_Class3 metN CcmA Ttg2A ABC_ModC_like FtsE ABC_MJ0796_Lo1CDE_FtsE CysA potA ABC_HisP_GlnQ_permeases COG3638 MglA ABC_PhnC_transporter AppF ThiQ DppD ABC_Iron-Siderophores_B12_Hemin COG4172 ABC_DR_subfamily_A ABC_ATPase ABC_CysA_sulfate_importer ABC_ModC_molybdenum_transporter ABC_MalK_N PRK10070 ABC_TM1139_LivF_branched ABC_FtsE_transporter PRK10744 ABC_Mj1267_LivG_branched glnQ ABC_subfamily_A ABC_drug_resistance_like ZnuC NatA fbpC HisP ABC_Metallic_Cations dppF potG fecE ABC_cobalt_CbiO_domain2 COG3845 LivF LivG TauB ABCC_CFTR1 ABCC_SUR1_N ModF PRK11264 ABC_ThiQ_thiamine_transporter PRK10851 ABCG_EPDR PhnK PRK10619 artP YhbG ModC Uup PRK10908 ArtP ABC_NatA_sodium_exporter COG4619 ssuB PRK11000 ABC_YhbG thiQ COG4181 ABC_Carb_Monos_I PRK10247 CeuD araG ABCC_CFTR2 PRK10575 sufC PRK10418 ABC_BcrA_bacitracin_resist ABC_DrrA tauB modC ABC_KpsT_Wzt PRK09700 COG4178 PRK11831 ABCG_White ABC_putative_ATPase ugpC btuD COG4559 COG4674 PvdE SapF PRK10535 PRK10253 PRK10261 ABC_FeS_Assembly phnK ABC_Carb_Monos_II PRK10419 TagH PhnK protein|multidrug resistance protein, putative, expressed",2.4731069]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0218700","Transcript","highly similar to ( 793) AT1G54350 | Symbols: | ABC transporter family protein | chr1:20286917-20290245 FORWARD COG4178 ABC_membrane_2 SunT ABCD_peroxisomal_ALDP MdlB SbmA CydD CydC SbmA_BacA PRK12369 ABC_cobalt_CbiO_domain1 PRK11160 ABC_tran PRK11098 ArpD PRK11174 ABCC_bacteriocin_exporters ABCC_Glucan_exporter_like CbiO ABC_NikE_OppD_transporters ABCC_MRP_domain2 ABC_MJ0796_Lo1CDE_FtsE protein|ABC transporter, ATP-binding protein, putative, expressed",1.862698]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0770500","Transcript","moderately similar to ( 301) AT4G33460 | Symbols: ATNAP13, EMB2751 | ATNAP13; transporter | chr4:16098325-16100113 REVERSEvery weakly similar to (83.2) CYSA_MESVI Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride ABC_cobalt_CbiO_domain1 CbiO FepC ABC_Carb_Solutes_like CcmA PotA ABC_Iron-Siderophores_B12_Hemin ABC_NrtD_SsuB_transporters ABC_PotA_N TauB ZnuC ABC_tran ABC_cobalt_CbiO_domain2 ABC_MJ0796_Lo1CDE_FtsE MalK ABC_Metallic_Cations CysA potA SalX DppF AbcC ABCC_MRP_Like COG1123 ABC_Org_Solvent_Resistant fecE ABC_ATPase ABC_CysA_sulfate_importer SunT CydD GlnQ ABC_subfamily_A MglA ABC_MetN_methionine_transporter fbpC ABC_ModC_like ABC_ModC_molybdenum_transporter ABC_MalK_N ABC_MTABC3_MDL1_MDL2 ThiQ potG tauB ABC_PstB_phosphate_transporter ABC_PhnC_transporter TauB COG3638 ABC_HisP_GlnQ_permeases ABC_DR_subfamily_A ModF COG4559 ABC_NikE_OppD_transporters ABC_Mj1267_LivG_branched ABCC_ATM1_transporter ABCC_MRP_domain1 ProV ABC_Class3 PRK11174 COG4152 AppF ABC_DrrA metN LivG ABC_Pro_Gly_Bertaine MdlB FtsE OpuBA ABC_ThiQ_thiamine_transporter Ttg2A ABC_Carb_Monos_I ABC_putative_ATPase PhnK ABC_drug_resistance_like CeuD Uup ABCC_MsbA ABC_OpuCA_Osmoprotection PstB ABCC_bacteriocin_exporters TagH artP ArtP ABC_KpsT_Wzt ABCC_Protease_Secretion COG4619 NatA PRK10851 DppD ABC_NatA_sodium_exporter CydC ABCC_cytochrome_bd ABC_BcrA_bacitracin_resist COG3845 thiQ ABC_TM1139_LivF_branched ABCC_TAP PRK10247 ABCC_Glucan_exporter_like btuD COG4586 COG4172 PRK11160 araG ABC_FtsE_transporter PRK10908 ssuB PRK09700 PRK10253 ugpC PRK11819 PRK03695 COG1245 PRK11000 PRK11264 ABC_YhbG LivF COG4181 PRK10575 CcmA ABC_NatA_like ABCG_EPDR ABCC_Hemolysin PRK10070 protein|ABC transporter, ATP-binding protein, putative, expressed",1.1925329]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0528900","Transcript","nearly identical (1677) AT3G53480 | Symbols: PDR9, ATPDR9, ABCG37 | PDR9 (PLEIOTROPIC DRUG RESISTANCE 9); ATPase, coupled to transmembrane movement of substances | chr3:19825366-19831644 FORWARDnearly identical (1747) PDR3_TOBAC Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane ABC_PDR_domain1 CcmA ABC_Metallic_Cations ABC_drug_resistance_like ZnuC ABC_cobalt_CbiO_domain1 FepC ABC_subfamily_A ABC_tran ABC_MJ0796_Lo1CDE_FtsE ABC_Carb_Solutes_like ABC_ATPase PotA CbiO ABC_cobalt_CbiO_domain2 SalX ABC_Mj1267_LivG_branched CydD ABC_NatA_sodium_exporter ABC_Org_Solvent_Resistant ABC_PhnC_transporter ABC_PstB_phosphate_transporter MglA SunT ABC_DR_subfamily_A NatA ABC_Class3 ABCC_MRP_Like ABC_BcrA_bacitracin_resist ABC_Iron-Siderophores_B12_Hemin araG CysA ABC_FtsE_transporter MalK ABC_NrtD_SsuB_transporters ABCC_MsbA ABC_TM1139_LivF_branched ArpD ABC_DrrA ModF Ttg2A CeuD COG3638 ABCC_Glucan_exporter_like COG1123 MdlB protein|pleiotropic drug resistance protein 15, putative, expressed",-1.7046064]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os05g0137200","Transcript","highly similar to ( 674) AT1G02520 | Symbols: PGP11 | PGP11 (P-GLYCOPROTEIN 11); ATPase, coupled to transmembrane movement of substances | chr1:524134-528745 FORWARDmoderately similar to ( 404) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABC_MTABC3_MDL1_MDL2 MdlB PRK11176 SunT ABCC_MsbA ABCC_ATM1_transporter ATM1 ABCC_Glucan_exporter_like ABCC_TAP ABCC_Hemolysin ABCC_MRP_Like CydD CydC ABCC_bacteriocin_exporters PRK10789 PRK11160 ABCC_MRP_domain2 PRK10790 PRK11174 ArpD ABC_PstB_phosphate_transporter AbcC ABCC_MRP_domain1 ABCC_cytochrome_bd ABC_cobalt_CbiO_domain1 ABC_Org_Solvent_Resistant ABC_MetN_methionine_transporter ABCC_NFT1 ABCC_Protease_Secretion ABC_Carb_Solutes_like ABCC_SUR2 PotA ABC_Class3 FepC ABC_tran OpuBA ABC_NikE_OppD_transporters PstB ABC_MJ0796_Lo1CDE_FtsE ABC_NrtD_SsuB_transporters ABC_OpuCA_Osmoprotection GlnQ CcmA ABC_PhnC_transporter SalX Ttg2A MalK COG1123 CbiO COG3638 ABC_membrane ABC_Pro_Gly_Bertaine ABC_DR_subfamily_A TauB ABC_PotA_N ABC_HisP_GlnQ_permeases CysA ABC_CysA_sulfate_importer potA FtsE ABC_Iron-Siderophores_B12_Hemin NatA ProV DppF ABC_ModC_like ABC_drug_resistance_like ABC_FtsE_transporter DppD ABC_MalK_N AppF MglA ABC_ModC_molybdenum_transporter glnQ metN PRK10070 ABC_Metallic_Cations COG4619 ABC_NatA_sodium_exporter ABC_subfamily_A PRK11264 COG4172 PRK10247 ThiQ ZnuC artP potG CeuD PRK10851 ABC_Mj1267_LivG_branched ModF TauB Uup ABC_cobalt_CbiO_domain2 thiQ LivF ABC_TM1139_LivF_branched dppF PRK10744 fbpC tauB ArtP COG3845 YhbG PRK10419 ABCC_CFTR2 ABC_BcrA_bacitracin_resist ABC_ThiQ_thiamine_transporter PhnK HisP LivG ABC_putative_ATPase COG4181 ABCC_SUR1_N ModC ABC_YhbG ABC_Carb_Monos_I fecE ABCG_EPDR COG4559 PRK10535 ABCC_CFTR1 PRK11831 modC COG4178 btuD ssuB PRK10575 PRK10522 PRK10762 PRK10908 PhnK PvdE PRK11000 phnK ABC_KpsT_Wzt protein|ABC transporter, ATP-binding protein, putative, expressed",1.8693342]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os04g0413000","Transcript","moderately similar to ( 429) AT5G03910 | Symbols: ATATH12, ATH12 | ATATH12; ATPase, coupled to transmembrane movement of substances / transporter | chr5:1054313-1057105 REVERSEweakly similar to ( 107) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB SunT ABCC_MsbA PRK11176 ABC_MTABC3_MDL1_MDL2 ABCC_Glucan_exporter_like CydD ATM1 ABCC_ATM1_transporter ABCC_Hemolysin ABCC_MRP_Like ABCC_TAP PRK10789 ABCC_bacteriocin_exporters ABCC_MRP_domain2 CydC PRK11160 PRK11174 ArpD ABCC_MRP_domain1 PRK10790 ABCC_Protease_Secretion ABC_cobalt_CbiO_domain1 SalX AbcC ABC_tran CcmA ABC_PstB_phosphate_transporter CbiO ABCC_cytochrome_bd ABC_NrtD_SsuB_transporters ZnuC ABC_NikE_OppD_transporters FepC ABC_MJ0796_Lo1CDE_FtsE AppF ABC_MetN_methionine_transporter ABC_Carb_Solutes_like PotA ABCC_SUR2 ABC_ATPase COG1123 ABCC_NFT1 ABC_Iron-Siderophores_B12_Hemin ABC_Metallic_Cations TauB ABC_DR_subfamily_A MalK ABC_cobalt_CbiO_domain2 GlnQ OpuBA ABC_Class3 ABC_PotA_N PstB ABC_OpuCA_Osmoprotection ABC_MalK_N ABC_HisP_GlnQ_permeases DppD DppF ABCC_CFTR1 ABC_Org_Solvent_Resistant potA FtsE COG4178 ABC_PhnC_transporter ABC_BcrA_bacitracin_resist ABCC_SUR1_N COG3638 ABC_Carb_Monos_I MglA ABC_ModC_like Uup ABC_CysA_sulfate_importer ABC_subfamily_A COG4172 ABC_Pro_Gly_Bertaine COG3845 ABC_TM1139_LivF_branched Ttg2A CysA ABC_KpsT_Wzt ABCC_CFTR2 TagH PRK10744 ABCG_EPDR ABCF_EF-3 ABCG_White ABC_drug_resistance_like ABC_Mj1267_LivG_branched ProV metN ABC_FtsE_transporter ThiQ NatA ssuB LivF PRK11000 TauB LivG ABC_DrrA ABC_putative_ATPase PRK10851 ugpC PRK10419 PRK11264 protein|ABC transmembrane transporter domain containing protein, expressed",0.99624175]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0177900","Transcript","highly similar to ( 938) AT2G26910 | Symbols: PDR4, ATPDR4 | PDR4 (PLEIOTROPIC DRUG RESISTANCE 4); ATPase, coupled to transmembrane movement of substances | chr2:11481623-11487874 FORWARDnearly identical (1182) PDR6_ORYSA Pleiotropic drug resistance protein 6 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White CcmA ABC2_membrane ABC_PDR_domain1 ABC_subfamily_A ABC_tran ABC_cobalt_CbiO_domain1 ABC_drug_resistance_like ZnuC ABC_MJ0796_Lo1CDE_FtsE ABC_Metallic_Cations SalX FepC ABC_PhnC_transporter CbiO ABC_DR_subfamily_A ABC_Carb_Solutes_like ABC_ATPase ABC_Iron-Siderophores_B12_Hemin ABC_Mj1267_LivG_branched SunT ABC_cobalt_CbiO_domain2 CydD ABC_Class3 ABC_BcrA_bacitracin_resist ABC_NatA_sodium_exporter ABCC_MRP_Like PotA COG3638 ABC_FtsE_transporter ABC_NrtD_SsuB_transporters MglA TauB NatA CysA ABC_Org_Solvent_Resistant COG1123 ABCC_Protease_Secretion MalK ABC_putative_ATPase COG4152 ABC_ModC_molybdenum_transporter CeuD protein|pleiotropic drug resistance protein 4, putative, expressed",3.2658243]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os06g0554800","Transcript","nearly identical (1617) AT3G16340 | Symbols: ATPDR1, PDR1 | PDR1; ATPase, coupled to transmembrane movement of substances | chr3:5539897-5546263 FORWARDnearly identical (2237) PDR12_ORYSA Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane CcmA ABC_PDR_domain1 ABC_subfamily_A ABC_drug_resistance_like ABC_tran ABC_cobalt_CbiO_domain1 ABC_Metallic_Cations ZnuC FepC ABC_Mj1267_LivG_branched CbiO ABC_cobalt_CbiO_domain2 ABC_MJ0796_Lo1CDE_FtsE SalX ABC_Carb_Solutes_like ABC_BcrA_bacitracin_resist SunT ABC_NatA_sodium_exporter PotA ABC_Iron-Siderophores_B12_Hemin PDR_assoc CysA ABC_DR_subfamily_A ABC_Org_Solvent_Resistant NatA CydD ABC_PhnC_transporter ABC_Class3 MglA CeuD ABC_putative_ATPase ABC_TM1139_LivF_branched MalK sufC ABC_PstB_phosphate_transporter ABC_ModC_molybdenum_transporter LivG ABC_DrrA COG4152 COG4559 ABC_NrtD_SsuB_transporters ModF ABC_YhbG ABC_ATPase protein|ABC-2 type transporter, putative, expressed",1.4269619]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os06g0184766","Transcript","nearly identical (1297) AT2G07680 | Symbols: ATMRP11 | ATMRP11; ATPase, coupled to transmembrane movement of substances | chr2:3515637-3522491 FORWARDweakly similar to ( 167) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) ABCC_MRP_domain2 ABCC_MRP_domain1 MdlB SunT ABCC_NFT1 ABCC_Glucan_exporter_like ABCC_SUR2 PRK11176 CydC CydD ABCC_MsbA ABCC_MRP_Like ABC_MTABC3_MDL1_MDL2 PRK10790 PRK11160 ABCC_ATM1_transporter ABCC_Hemolysin ABCC_bacteriocin_exporters ABCC_CFTR1 PRK11174 ABCC_CFTR2 ATM1 ABCC_SUR1_N ABCC_Protease_Secretion ABCC_TAP CcmA ABC_tran ABCC_cytochrome_bd PRK10789 FepC ABC_cobalt_CbiO_domain1 ABC_membrane ArpD ABC_PstB_phosphate_transporter ABC_NikE_OppD_transporters AbcC TauB CbiO COG1123 ABC_Metallic_Cations ZnuC ABC_NrtD_SsuB_transporters ABC_ATPase ABC_Org_Solvent_Resistant ABC_PhnC_transporter ABC_TM1139_LivF_branched ABC_Mj1267_LivG_branched SalX COG3638 ABC_Carb_Solutes_like ABC_DR_subfamily_A MalK ABC_BcrA_bacitracin_resist DppF ABC_MJ0796_Lo1CDE_FtsE ABC_Iron-Siderophores_B12_Hemin FtsE ABC_MetN_methionine_transporter ABC_subfamily_A PotA NatA DppD ABC_drug_resistance_like ABC_Class3 LivF COG4178 MglA ABC_MalK_N OpuBA PhnK YhbG GlnQ AppF ABC_NatA_sodium_exporter ABC_FtsE_transporter LivG fecE PstB PvdE ABC_KpsT_Wzt TagH ABC_DrrA ABCD_peroxisomal_ALDP ABC_YhbG ABC_OpuCA_Osmoprotection Ttg2A PRK11000 ABCG_EPDR COG4172 COG3845 Uup ABC_PotA_N ABC_ModC_like metN CysA glnQ PRK10522 protein|multidrug resistance-associated protein 11, putative, expressed",-1.0436883]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os03g0280000","Transcript","nearly identical (2008) AT3G55320 | Symbols: PGP20 | PGP20 (P-GLYCOPROTEIN 20); ATPase, coupled to transmembrane movement of substances | chr3:20507391-20513393 REVERSEmoderately similar to ( 412) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB ABC_MTABC3_MDL1_MDL2 SunT ABCC_MsbA ABCC_Glucan_exporter_like PRK11176 ABCC_ATM1_transporter ATM1 ABCC_Hemolysin ABCC_TAP CydC ABCC_bacteriocin_exporters PRK11160 CydD ABCC_MRP_Like ABCC_MRP_domain2 PRK10790 PRK10789 ArpD PRK11174 ABCC_NFT1 ABCC_MRP_domain1 ABC_cobalt_CbiO_domain1 ABCC_cytochrome_bd AbcC ABC_tran ABC_PstB_phosphate_transporter ABCC_Protease_Secretion SalX ABC_MetN_methionine_transporter ABCC_SUR2 FepC ABC_membrane ABC_NikE_OppD_transporters CcmA GlnQ CbiO OpuBA ABC_Carb_Solutes_like ABC_OpuCA_Osmoprotection ABC_MJ0796_Lo1CDE_FtsE MalK ABC_Org_Solvent_Resistant COG1123 ABC_NrtD_SsuB_transporters PstB PotA ABC_PhnC_transporter ABC_Class3 COG3638 ABC_HisP_GlnQ_permeases ABC_Mj1267_LivG_branched ABC_Pro_Gly_Bertaine MglA metN TauB Ttg2A CysA DppD ProV ABC_TM1139_LivF_branched ABC_DR_subfamily_A ZnuC ABC_Iron-Siderophores_B12_Hemin LivG ABC_FtsE_transporter potA ABC_ATPase LivF ABC_PotA_N glnQ DppF ABC_subfamily_A FtsE ABCC_CFTR1 ABC_ModC_like ABCG_EPDR ThiQ ABCG_White PRK10535 ABC_Metallic_Cations COG3845 COG4619 COG4172 ABC_ThiQ_thiamine_transporter ABC_CysA_sulfate_importer ABC_cobalt_CbiO_domain2 TauB ABCC_CFTR2 ABCC_SUR1_N ABC_MalK_N fecE HisP CeuD NatA ABC_BcrA_bacitracin_resist AppF PRK10744 SapF artP PRK10070 sufC ABC_ModC_molybdenum_transporter ModF PhnK potG TagH ArtP ABC_drug_resistance_like PRK11264 PRK10619 thiQ araG ABC_Carb_Monos_I PRK10247 ABC_KpsT_Wzt PvdE ABC_NatA_sodium_exporter btuD livG ABC_YhbG PRK10522 dppF protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0695858]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0318500","Transcript","highly similar to ( 758) AT1G66950 | Symbols: PDR11, ATPDR11 | PDR11 (PLEIOTROPIC DRUG RESISTANCE 11); ATPase, coupled to transmembrane movement of substances | chr1:24978239-24984461 FORWARDhighly similar to ( 882) PDR5_ORYSA Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane ABC_PDR_domain1 CcmA ABC_subfamily_A ABC_drug_resistance_like ABC_tran ABC_MJ0796_Lo1CDE_FtsE ABC_cobalt_CbiO_domain1 ZnuC FepC CydD ABC_Metallic_Cations MglA SalX PotA COG1123 CbiO ABC_Mj1267_LivG_branched ABC_Carb_Solutes_like SunT ABC_Org_Solvent_Resistant ABC_PstB_phosphate_transporter NatA ABC_BcrA_bacitracin_resist ABC_cobalt_CbiO_domain2 ABC_DR_subfamily_A COG3638 ABC_NikE_OppD_transporters ABC_FtsE_transporter araG ABC_NatA_sodium_exporter CysA protein|ABC-2 type transporter family protein, expressed",1.5206984]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0121700","Transcript","highly similar to ( 932) AT2G01320 | Symbols: | ABC transporter family protein | chr2:154669-158063 REVERSEmoderately similar to ( 248) PDR15_ORYSA Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) ABCG_EPDR ABCG_White CcmA ABC_PDR_domain2 ABC_PDR_domain1 ABC2_membrane SalX ABC_cobalt_CbiO_domain1 ABC_MJ0796_Lo1CDE_FtsE ABC_tran FepC ABC_subfamily_A ABC_Metallic_Cations ZnuC CbiO ABC_Mj1267_LivG_branched ABC_drug_resistance_like TauB ABC_DR_subfamily_A ABC_PhnC_transporter ABC_Org_Solvent_Resistant PotA ABC_NrtD_SsuB_transporters CydD ABC_Iron-Siderophores_B12_Hemin NatA CysA ABC_Carb_Solutes_like LivG ABC_PstB_phosphate_transporter ABC_ATPase MalK ABC_YhbG COG3638 GlnQ ABC_putative_ATPase ABC_Class3 SunT COG1123 Ttg2A ABC_cobalt_CbiO_domain2 ABCC_MRP_Like YhbG ABC_HisP_GlnQ_permeases COG4559 ABC_BcrA_bacitracin_resist ABC_ModC_molybdenum_transporter DppD ABC_NikE_OppD_transporters ABC_NatA_sodium_exporter ABCC_Glucan_exporter_like ABC_TM1139_LivF_branched MglA ABC_FtsE_transporter MdlB CeuD PRK10535 ABC_ModC_like TauB ABC_CysA_sulfate_importer PRK11160 ThiQ COG4152 CydC COG3845 ABC_NatA_like OpuBA PRK11174 ABCC_ATM1_transporter ModF DppF LivF btuD AbcC fecE ABCC_MsbA FtsE PRK09984 COG4181 ABC_MTABC3_MDL1_MDL2 COG4619 ABC_OpuCA_Osmoprotection ABCC_MRP_domain1 ABC_DrrA PRK11264 Uup ABCC_bacteriocin_exporters ABC_ThiQ_thiamine_transporter ABC_PotA_N ABC_MetN_methionine_transporter PRK10895 tauB ABCC_Hemolysin PRK10851 ModC ABCC_Protease_Secretion COG4136 PhnK fbpC protein|white-brown complex homolog protein 7, putative, expressed",1.1929636]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os08g0167000","Transcript","highly similar to ( 689) AT1G31770 | Symbols: | ABC transporter family protein | chr1:11375252-11377644 REVERSEweakly similar to ( 132) PDR13_ORYSA Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) ABCG_White ABCG_EPDR CcmA ABC_PDR_domain2 ABC_PDR_domain1 ABC2_membrane ABC_Carb_Solutes_like ABC_MJ0796_Lo1CDE_FtsE ABC_tran PotA SalX ABC_NrtD_SsuB_transporters ABC_subfamily_A ABC_Org_Solvent_Resistant ABC_cobalt_CbiO_domain1 CysA GlnQ FepC ABC_ModC_molybdenum_transporter TauB ZnuC ABC_Metallic_Cations ABC_PhnC_transporter MalK ABC_Class3 ABC_HisP_GlnQ_permeases ABC_Mj1267_LivG_branched COG3638 ABC_drug_resistance_like SunT OpuBA ABC_DR_subfamily_A COG1123 ABC_ModC_like ABC_Iron-Siderophores_B12_Hemin ABC_putative_ATPase LivG ABC_PotA_N Ttg2A ABC_NikE_OppD_transporters ABCC_ATM1_transporter ABCC_MRP_Like ABC_PstB_phosphate_transporter COG4152 DppF CbiO COG4181 ABC_BcrA_bacitracin_resist ABC_CysA_sulfate_importer NatA CydD PRK11264 TauB LivF DppD ABC_TM1139_LivF_branched ABC_cobalt_CbiO_domain2 ABC_DrrA ABC_MalK_N PRK10584 ABCC_MsbA MdlB ModF ABC_OpuCA_Osmoprotection potA MglA COG4559 CydC PRK10851 artP COG3845 ABC_NatA_sodium_exporter FtsE AbcC ABC_Pro_Gly_Bertaine ABC_MetN_methionine_transporter sufC ABC_YhbG tauB COG4172 ArtP ABC_FtsE_transporter COG4136 ABCC_bacteriocin_exporters ATM1 ABCC_Glucan_exporter_like glnQ PRK09984 ModC CeuD ABC_ATPase Uup ThiQ PRK11160 YhbG lolD PRK11000 PRK10535 PRK03695 COG4619 ABC_MTABC3_MDL1_MDL2 ABCC_Hemolysin ArpD fecE COG4674 ABC_NatA_like ABC_ThiQ_thiamine_transporter HisP protein|ABC-2 type transporter domain containing protein, expressed",1.2633623]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os08g0384500","Transcript","nearly identical (1030) AT1G15520 | Symbols: PDR12, ATPDR12 | PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances | chr1:5331993-5338175 REVERSEnearly identical (1121) PDR3_ORYSA Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) ABC_PDR_domain2 ABCG_EPDR ABCG_White ABC2_membrane CcmA ABC_PDR_domain1 ABC_drug_resistance_like ABC_subfamily_A ABC_cobalt_CbiO_domain1 ABC_tran FepC ZnuC ABC_MJ0796_Lo1CDE_FtsE SalX ABC_Metallic_Cations PotA PDR_assoc ABC_cobalt_CbiO_domain2 ABC_Carb_Solutes_like CbiO SunT ABC_Iron-Siderophores_B12_Hemin CydD ABC_DR_subfamily_A ABC_Mj1267_LivG_branched ABC_Org_Solvent_Resistant ABC_Class3 ABC_PhnC_transporter MalK CysA ABC_FtsE_transporter MglA ABC_NatA_sodium_exporter COG3638 NatA ABC_NikE_OppD_transporters ABC_DrrA COG1123 ABC_BcrA_bacitracin_resist ABC_PstB_phosphate_transporter ABC_NrtD_SsuB_transporters TauB ABCC_MRP_Like ABC_TM1139_LivF_branched ABCC_bacteriocin_exporters LivG ABC_ModC_molybdenum_transporter FtsE fecE sufC CcmA ABC_YhbG ABCC_Glucan_exporter_like Ttg2A AbcC GlnQ LivF araG COG4181 protein|pleiotropic drug resistance protein 3, putative, expressed",-1.337289]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os01g0695800","Transcript","highly similar to ( 716) AT2G47000 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase | chr2:19310008-19314750 REVERSEmoderately similar to ( 470) MDR_ORYSA Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) MdlB ABC_MTABC3_MDL1_MDL2 SunT PRK11176 ABCC_MsbA ABCC_ATM1_transporter ATM1 ABCC_Glucan_exporter_like ABCC_Hemolysin ABCC_TAP CydD PRK10789 ABCC_MRP_Like ABCC_bacteriocin_exporters CydC PRK11160 PRK10790 PRK11174 ABCC_MRP_domain2 ArpD ABC_PstB_phosphate_transporter AbcC ABC_cobalt_CbiO_domain1 ABCC_Protease_Secretion COG1123 ABCC_NFT1 GlnQ ABCC_cytochrome_bd ABC_tran ABCC_MRP_domain1 ABC_NikE_OppD_transporters CbiO DppD ABC_MetN_methionine_transporter SalX ABC_MJ0796_Lo1CDE_FtsE DppF OpuBA ABC_membrane ABC_Org_Solvent_Resistant ABCC_SUR2 CcmA ABC_Carb_Solutes_like PotA ABC_NrtD_SsuB_transporters FepC PstB ABC_OpuCA_Osmoprotection MalK Ttg2A TauB ABC_PhnC_transporter ABC_Class3 AppF COG3638 ABC_HisP_GlnQ_permeases ABC_DR_subfamily_A ZnuC ABC_Iron-Siderophores_B12_Hemin CysA dppF ABC_PotA_N ABC_ModC_like ABC_Pro_Gly_Bertaine ABC_Metallic_Cations COG4172 FtsE MglA ProV NatA metN COG3845 PRK11264 ABC_CysA_sulfate_importer fbpC ThiQ ABC_cobalt_CbiO_domain2 ABC_MalK_N COG4619 potA ABC_FtsE_transporter HisP ABC_drug_resistance_like ABC_NatA_sodium_exporter ABC_ModC_molybdenum_transporter ABC_Mj1267_LivG_branched glnQ ABC_TM1139_LivF_branched ModF ABCC_CFTR2 ABCC_CFTR1 ModC ABCC_SUR1_N ABC_subfamily_A LivG ABC_ThiQ_thiamine_transporter PRK10744 PRK10070 PRK10851 PhnK LivF TauB artP Uup COG4178 ABC_putative_ATPase tauB PRK10419 modC thiQ sufC potG PRK10247 PRK10619 ABC_BcrA_bacitracin_resist COG4181 CeuD ArtP PRK10535 ABC_YhbG YhbG fecE ABC_DrrA ABC_Carb_Monos_I araG ssuB phnK PRK10575 ABCG_EPDR ABC_KpsT_Wzt PRK11831 PRK10261 TagH PvdE ugpC COG4136 ABCG_White COG4559 lolD btuD COG4674 PhnK livG SapF ABC_FeS_Assembly ABC_ATPase ABCD_peroxisomal_ALDP PRK10418 PRK11000 PRK10908 protein|ABC transporter, ATP-binding protein, putative, expressed",-1.0602475]
[null,34.16,"transport.ABC transporters and multidrug resistance systems","Os02g0805800","Transcript","highly similar to ( 726) AT2G39190 | Symbols: ATATH8 | ATATH8; transporter | chr2:16350140-16355745 FORWARD AarF ubiB ABC1 protein| ELMO/CED-12 family protein, putative, expressed",1.9323982]
[null,34.18,"transport.unspecified anions","Os08g0300300","Transcript","highly similar to ( 813) AT5G33280 | Symbols: | chloride channel-like (CLC) protein, putative | chr5:12549280-12552305 FORWARD ClC_6_like ClC_euk ClC_3_like Voltage_CLC EriC ClC_1_like EriC Voltage_gated_ClC PRK05277 EriC_like protein|chloride channel protein, putative, expressed",1.2744942]
[null,"34.19.1","transport.Major Intrinsic Proteins.PIP","Os09g0541000","Transcript","moderately similar to ( 344) AT4G35100 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | chr4:16708672-16709958 FORWARDmoderately similar to ( 465) PIP27_ORYSA Probable aquaporin PIP2.7 (Plasma membrane intrinsic protein 2.7) (OsPIP2.7) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",4.4975114]
[null,"34.19.1","transport.Major Intrinsic Proteins.PIP","Os04g0233400","Transcript","moderately similar to ( 370) AT4G35100 | Symbols: PIP3, PIP3A, PIP2;7, SIMIP | PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | chr4:16708672-16709958 FORWARDmoderately similar to ( 456) PIP26_ORYSA Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",3.4536438]
[null,"34.19.2","transport.Major Intrinsic Proteins.TIP","Os06g0336200","Transcript","moderately similar to ( 265) AT3G16240 | Symbols: DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | DELTA-TIP; ammonia transporter/ methylammonium transmembrane transporter/ water channel | chr3:5505534-5506788 FORWARDmoderately similar to ( 357) TIP22_ORYSA Probable aquaporin TIP2.2 (Tonoplast intrinsic protein 2.2) (OsTIP2.2) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",3.6744316]
[null,"34.19.2","transport.Major Intrinsic Proteins.TIP","Os02g0658100","Transcript","moderately similar to ( 295) AT5G47450 | Symbols: ATTIP2;3, TIP2;3, DELTA-TIP3 | AtTIP2;3; ammonia transporter/ methylammonium transmembrane transporter/ water channel | chr5:19248509-19249466 REVERSEmoderately similar to ( 362) TIP21_ORYSA Probable aquaporin TIP2.1 (Tonoplast intrinsic protein 2.1) (OsTIP2.1) - Oryza sativa (Rice) MIP MIP GlpF PRK05420 protein|aquaporin protein, putative, expressed",-1.1371179]
[null,"34.19.3","transport.Major Intrinsic Proteins.NIP","Os08g0462700","Transcript","moderately similar to ( 329) AT3G14000 | Symbols: ATBRXL2, BRX-LIKE2 | ATBRXL2 | chr3:4631170-4633353 REVERSE protein|Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed",2.403643]
[null,34.2,"transport.porins","Os03g0137500","Transcript","moderately similar to ( 268) AT5G57490 | Symbols: VDAC4, ATVDAC4 | VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel | chr5:23283895-23285335 REVERSEmoderately similar to ( 236) VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) - Solanum tuberosum (Potato) Porin_3 protein|outer mitochondrial membrane porin, putative, expressed",-1.0140386]
[null,34.21,"transport.calcium","Os12g0175500","Transcript","moderately similar to ( 308) AT2G38270 | Symbols: CXIP2, ATGRX2 | CXIP2 (CAX-INTERACTING PROTEIN 2); electron carrier/ protein disulfide oxidoreductase | chr2:16031347-16033054 REVERSE GRX_PICOT_like COG0278 GRX_family PRK10824 protein|OsGrx_S16 - glutaredoxin subgroup II, expressed",1.4510422]
[null,"34.23.1","transport.hormones.auxin","Os02g0224800","Transcript","moderately similar to ( 435) AT5G56750 | Symbols: | Ndr family protein | chr5:22957986-22960606 FORWARDmoderately similar to ( 363) SF21_HELAN Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) Ndr protein|pollen-specific protein SF21, putative, expressed",2.3342829]
[null,"34.23.1","transport.hormones.auxin","Os05g0196200","Transcript","highly similar to ( 514) AT5G56750 | Symbols: | Ndr family protein | chr5:22957986-22960606 FORWARDmoderately similar to ( 444) SF21_HELAN Pollen-specific protein SF21 - Helianthus annuus (Common sunflower) Ndr protein|pollen-specific protein SF21, putative, expressed",1.64965]
[null,34.99,"transport.misc","Os02g0670700","Transcript","moderately similar to ( 351) AT4G21300 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11336479-11339052 FORWARDvery weakly similar to (92.8) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|expressed protein",1.5658927]
[null,34.99,"transport.misc","Os02g0273800","Transcript","moderately similar to ( 417) AT2G32230 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:13679608-13681756 REVERSE protein|PPR repeat domain containing protein, putative, expressed",2.1984947]
[null,34.99,"transport.misc","Os12g0552300","Transcript","highly similar to ( 946) AT4G13650 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:7939611-7942898 REVERSEweakly similar to ( 128) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.8654522]
[null,34.99,"transport.misc","Os01g0607800","Transcript","moderately similar to ( 464) AT5G55740 | Symbols: CRR21 | CRR21 (chlororespiratory reduction 21) | chr5:22561941-22564433 REVERSEvery weakly similar to (97.4) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",2.9301584]
[null,34.99,"transport.misc","Os10g0190900","Transcript","moderately similar to ( 465) AT5G52450 | Symbols: | MATE efflux protein-related | chr5:21289042-21291749 REVERSE NorM PRK01766 PRK00187 MatE protein|MATE efflux family protein, putative, expressed",-1.6866058]
[null,34.99,"transport.misc","Os03g0216700","Transcript","moderately similar to ( 374) AT1G51340 | Symbols: | MATE efflux family protein | chr1:19032034-19034681 FORWARD NorM protein|MATE efflux protein, putative, expressed",3.1010273]
[null,34.99,"transport.misc","Os03g0638200","Transcript","moderately similar to ( 279) AT3G13050 | Symbols: | transporter-related | chr3:4176866-4178868 FORWARD Sugar_tr protein|transporter family protein, putative, expressed",1.0119572]
[null,34.99,"transport.misc","Os01g0929000","Transcript","highly similar to ( 671) AT3G19340 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:6701387-6704071 REVERSE protein|expressed protein",1.027943]
[null,34.99,"transport.misc","Os07g0613300","Transcript","highly similar to ( 824) AT1G72560 | Symbols: PSD | PSD (PAUSED); nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter/ tRNA binding | chr1:27325026-27329467 REVERSE Xpo1 protein|exportin 1, putative, expressed",-1.8188405]
[null,34.99,"transport.misc","Os01g0701900","Transcript","highly similar to ( 536) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",1.1218387]
[null,34.99,"transport.misc","Os12g0163600","Transcript","moderately similar to ( 479) AT4G15720 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:8949569-8951419 FORWARD protein|tetratricopeptide-like helical, putative, expressed",-1.0337161]
[null,34.99,"transport.misc","Os12g0479900","Transcript","highly similar to ( 713) AT3G19340 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | chr3:6701387-6704071 REVERSE protein|expressed protein",1.0086638]
[null,34.99,"transport.misc","Os07g0191500","Transcript","highly similar to ( 536) AT1G59720 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTION28); endonuclease | chr1:21939868-21941784 REVERSE protein|pentatricopeptide, putative, expressed",4.0154567]
[null,34.99,"transport.misc","Os07g0642300","Transcript","moderately similar to ( 324) AT5G54750 | Symbols: | transport protein particle (TRAPP) component Bet3, putative | chr5:22242080-22243477 FORWARD TRAPP_Bet3 protein|transport protein particle component, Bet3, domain containing protein, expressed",-1.0046993]
[null,34.99,"transport.misc","Os10g0344500","Transcript","weakly similar to ( 196) AT1G73700 | Symbols: | MATE efflux family protein | chr1:27717554-27719630 REVERSE NorM PRK01766 MatE protein|MATE efflux family protein, putative, expressed",-2.7708168]
[null,34.99,"transport.misc","Os04g0488200","Transcript","moderately similar to ( 476) AT4G38010 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:17859582-17861261 REVERSEvery weakly similar to (91.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",1.1440507]
[null,34.99,"transport.misc","Os05g0267100","Transcript","weakly similar to ( 124) AT1G22180 | Symbols: | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | chr1:7828434-7829745 REVERSE protein|SEC14 cytosolic factor family protein, putative, expressed",4.299347]
[null,34.99,"transport.misc","Os05g0554000","Transcript","moderately similar to ( 370) AT1G71140 | Symbols: | MATE efflux family protein | chr1:26824762-26826748 FORWARD NorM PRK01766 MatE protein|MATE efflux family protein, putative, expressed",2.2158854]
[null,34.99,"transport.misc","Os03g0582300","Transcript","moderately similar to ( 257) AT1G03550 | Symbols: | secretory carrier membrane protein (SCAMP) family protein | chr1:885851-887778 REVERSE SCAMP protein|secretory carrier-associated membrane protein, putative, expressed",-2.1764817]
[null,34.99,"transport.misc","Os09g0381100","Transcript","highly similar to ( 817) AT5G62890 | Symbols: | permease, putative | chr5:25243723-25246748 FORWARD Xan_ur_permease UraA PRK10720 protein|nucleobase-ascorbate transporter, putative, expressed",1.0136734]
[null,34.99,"transport.misc","Os02g0821600","Transcript","moderately similar to ( 318) AT4G00350 | Symbols: | MATE efflux family protein | chr4:151978-153988 FORWARD NorM MatE protein|MATE efflux family protein, putative, expressed",1.3273071]
[null,34.99,"transport.misc","Os07g0172600","Transcript","highly similar to ( 677) AT5G03800 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE protein|pentatricopeptide, putative, expressed",1.0694861]
[null,34.99,"transport.misc","Os07g0636900","Transcript","moderately similar to ( 467) AT2G29760 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:12712884-12715100 FORWARDvery weakly similar to (99.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.0778502]
[null,34.99,"transport.misc","Os03g0570800","Transcript","highly similar to ( 538) AT3G21690 | Symbols: | MATE efflux family protein | chr3:7638750-7641861 FORWARD NorM PRK01766 MatE PRK00187 protein|MATE efflux family protein, putative, expressed",-1.6251078]
[null,34.99,"transport.misc","Os11g0482400","Transcript","moderately similar to ( 483) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSEvery weakly similar to (98.6) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide repeat protein PPR986-12, putative, expressed",3.0890915]
[null,34.99,"transport.misc","Os02g0735800","Transcript","moderately similar to ( 264) AT1G11290 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease | chr1:3791454-3793883 REVERSE protein|pentatricopeptide, putative, expressed",3.5191174]
[null,34.99,"transport.misc","Os01g0857500","Transcript","highly similar to ( 580) AT2G27810 | Symbols: | xanthine/uracil permease family protein | chr2:11852338-11855411 FORWARD Xan_ur_permease UraA protein|nucleobase-ascorbate transporter, putative, expressed",4.437719]
[null,34.99,"transport.misc","Os04g0499100","Transcript","moderately similar to ( 423) AT5G25050 | Symbols: | integral membrane transporter family protein | chr5:8632022-8633828 FORWARDBT1 protein|integral membrane transporter family protein, putative, expressed",1.4935709]
[null,34.99,"transport.misc","Os06g0104000","Transcript","highly similar to ( 602) AT2G46915 | Symbols: | unknown protein | chr2:19274018-19277707 REVERSE protein|expressed protein",1.0599656]
[null,34.99,"transport.misc","Os07g0425000","Transcript","moderately similar to ( 365) AT1G04570 | Symbols: | integral membrane transporter family protein | chr1:1246859-1248600 REVERSEBT1 protein|integral membrane transporter family protein, putative, expressed",1.3912657]
[null,34.99,"transport.misc","Os12g0132800","Transcript","moderately similar to ( 235) AT5G13750 | Symbols: ZIFL1 | ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | chr5:4438318-4440829 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",2.1567156]
[null,34.99,"transport.misc","Os03g0635000","Transcript","moderately similar to ( 320) AT2G42920 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:17858705-17860384 FORWARDvery weakly similar to (87.0) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",4.027579]
[null,34.99,"transport.misc","Os01g0708600","Transcript","moderately similar to ( 362) AT5G58030 | Symbols: | transport protein particle (TRAPP) component Bet3 family protein | chr5:23487021-23488483 REVERSE COG5128 TRAPP_Bet3 protein|transport protein particle component, Bet3, domain containing protein, expressed",-1.1999387]
[null,34.99,"transport.misc","Os08g0497300","Transcript","moderately similar to ( 463) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",1.7594906]
[null,34.99,"transport.misc","Os03g0188100","Transcript","highly similar to ( 578) AT5G65380 | Symbols: | ripening-responsive protein, putative | chr5:26123241-26126352 REVERSE NorM PRK01766 protein|MATE efflux family protein, putative, expressed",-2.8997297]
[null,34.99,"transport.misc","Os08g0440100","Transcript","moderately similar to ( 256) AT5G58070 | Symbols: ATTIL, TIL | TIL (TEMPERATURE-INDUCED LIPOCALIN); binding / transporter | chr5:23500512-23501156 REVERSE Lipocalin_2 Blc PRK10477 protein|OsTIL-2 Temperature-induced lipocalin-2, expressed",1.5349528]
[null,34.99,"transport.misc","Os09g0481100","Transcript","moderately similar to ( 454) AT4G39170 | Symbols: | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | chr4:18240887-18243621 FORWARD CRAL_TRIO SEC14 SEC14 protein|phosphatidylinositol transfer, putative, expressed",2.1477907]
[null,34.99,"transport.misc","Os12g0106600","Transcript","moderately similar to ( 362) AT2G38330 | Symbols: | MATE efflux family protein | chr2:16064571-16067318 FORWARD NorM PRK10189 protein|MATE efflux protein, putative, expressed",2.0669186]
[null,34.99,"transport.misc","Os09g0555100","Transcript","moderately similar to ( 456) AT5G65980 | Symbols: | auxin efflux carrier family protein | chr5:26392444-26394232 FORWARD Mem_trans protein|auxin efflux carrier component, putative, expressed",4.1791673]
[null,34.99,"transport.misc","Os03g0823800","Transcript","highly similar to ( 666) AT1G60030 | Symbols: ATNAT7, NAT7 | xanthine/uracil permease family protein | chr1:22113993-22116648 REVERSE Xan_ur_permease UraA PRK10720 protein|nucleobase-ascorbate transporter, putative, expressed",1.9040369]
[null,34.99,"transport.misc","Os03g0582200","Transcript","moderately similar to ( 312) AT1G61250 | Symbols: SC3 | SC3 (SECRETORY CARRIER 3); transmembrane transporter | chr1:22586035-22588664 FORWARD SCAMP protein|secretory carrier-associated membrane protein 4, putative, expressed",-1.4735543]
[null,34.99,"transport.misc","Os04g0436800","Transcript","highly similar to ( 550) AT3G26540 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:9744542-9746644 REVERSEvery weakly similar to (81.3) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|pentatricopeptide, putative, expressed",-1.1202292]
[null,34.99,"transport.misc","Os07g0180700","Transcript","moderately similar to ( 216) AT3G43790 | Symbols: ZIFL2 | ZIFL2 (ZINC INDUCED FACILITATOR-like 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | chr3:15655443-15658848 FORWARD protein|major facilitator superfamily antiporter, putative, expressed",-1.4535028]

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["RLKs matched with MapMan and Literature (Gao & Xue et al 2012)",null,"Calcium binding that matched MapMan, RGAP, RAPdb and literature (https://link.springer.com/article/10.1186/1471-2229-7-4)",null,"G protein that matched MapMan, RGAP, RAPdb",null,"343 TFs from STIFDB2, RGAP, PlantTFDB and MapMan in current dataset",null,null,"Annotation using PlantTFDB",{"$nulls":13},"410 DEGs for photosynthesis/ENZYMES/C AND N metabolism from MapMan and AgriGO","857 DEGs for photosynthesis/ENZYMES/C AND N metabolism/TFs/RLKs/3 MAPKinases/hormones from MapMan, AgriGO and ExPath in RGA1-Nitrate dataset","1934 DEGs for photosynthesis/ENZYMES/C AND N metabolism/TFs/RLKs/3 MAPKinases/hormones from MapMan, AgriGO and ExPath in WT-Nitrate dataset","Total DEGs","GeOmean_FOld_WT_T(Average)","Geomean_Fold_MT_T",null,"WT",null,"RGA1",null,null,"miRNAs","GeOmean_FOld_WT_T(Average)","Geomean_Fold_MT_T",null,"Common elements in \"Leaf and/or Culm\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Common elements in \"Heading date and\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Common elements in \"Seed\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Common elements in \"Tolerance\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Common elements in \"Yield\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Common elements in \"Tiller\" and \"857 Photo/hor/TF\":","GeOmean_FOld_WT_T(Average)","GeOmean_FOld_MT_T(Average)",null,"Leaf and/or Culm and/or Root ",{"$nulls":17},"Heading,inflorescence,panicle",{"$nulls":16},"Seed development",{"$nulls":16},"Tolerance and resistance",{"$nulls":16},"Yield and Productivity",{"$nulls":16},"DEGs related toTiller in the current study"]
["Os05g0480400",null,"Os01g0267900",null,"Os06g0195900",null,"RAP","MSU7","Geomean_Fold_MT_T","RAP","MSU7",null,"Geomean_Fold_MT_T",null,"17.2.2","hormone metabolism.auxin.signal transduction","Os01g0919800","Transcript","moderately similar to ( 351) AT5G16530 | Symbols: PIN5 | PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter | chr5:5400735-5402626 FORWARDhighly similar to ( 506) PIN6_ORYSA Probable auxin efflux carrier component 6 (OsPIN6) - Oryza sativa (Rice)Mem_trans protein|auxin efflux carrier component, putative, expressed",-2.1748767,{"$nulls":3},"Os05g0191500","Os05g0463800","Os01g0127400","Os01g0127400",2.6008065,2.3219495,null,"DEGs (RAP-ID)","GeOmean_FOld_WT_T(Average)","RAP-ID","Geomean_Fold_MT_T",null,"osa-miR439d",0,-3.0436947,null,"Os05g0463800",0,-1.6632209,null,"Os04g0683700",0,-1.505579,null,"Os02g0169300",0,-0.987922,null,"Os08g0174500",0,0,null,"Os08g0174500",0,-1.6632209,null,"Os12g0548300",2.3556337,2.6423004,null,"CGSNL Gene Symbol","Gene symbol synonym(s)","CGSNL Gene Name","Gene name synonym(s)","Chr. No.","Trait Class","Gene Ontology","Trait Ontology","Plant Ontology","RAP ID","MSU ID","MSU ID","147 DEGs in RGA1-Nitrate","271 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T",null,"CGSNL Gene Symbol","Gene symbol synonym(s)","CGSNL Gene Name","Gene name synonym(s)","Chr. No.","Trait Class","Gene Ontology","Trait Ontology","Plant Ontology","RAP ID","MSU ID","64 DEGs in RGA1-Nitrate","133 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T",null,"CGSNL Gene Symbol","Gene symbol synonym(s)","CGSNL Gene Name","Gene name synonym(s)","Chr. No.","Trait Class","Gene Ontology","Trait Ontology","Plant Ontology","RAP ID","MSU ID","100 DEGs in RGA1-Nitrate","168 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T",null,"CGSNL Gene Symbol","Gene symbol synonym(s)","CGSNL Gene Name","Gene name synonym(s)","Chr. No.","Trait Class","Gene Ontology","Trait Ontology","Plant Ontology","RAP ID","MSU ID","581 DEGs in RGA1-Nitrate","1099 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T",null,"CGSNL Gene Symbol","Gene symbol synonym(s)","CGSNL Gene Name","Gene name synonym(s)","Chr. No.","Trait Class","Gene Ontology","Trait Ontology","Plant Ontology","RAP ID","MSU ID","67 DEGs in RGA1-Nitrate","96 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T",null,"17 DEGs in RGA1-Nitrate","31 DEGs in WT-Nitrate","Total DEGs","Geomean_Fold_WT_T(Average)","Geomean_Fold_MT_T"]
["Os04g0649700",null,"Os01g0279300",null,"Os04g0620700",null,"Os05g0527000","LOC_Os05g45100",{"$f":"VLOOKUP(G3,AG:AH, 2,FALSE)","v":-3.971136},"Os03g0818800","LOC_Os03g60430","AP2",{"$f":"VLOOKUP(K3,H:I, 2,FALSE)","v":-1.0689335},null,"17.2.2","hormone metabolism.auxin.signal transduction","Os11g0169200","Transcript","highly similar to ( 630) AT1G77690 | Symbols: LAX3 | LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter | chr1:29201232-29203317 REVERSEhighly similar to ( 742) LAX4_ORYSA Putative auxin transporter-like protein 4 - Oryza sativa (Rice) Aa_trans protein|transmembrane amino acid transporter protein, putative, expressed",2.4397767,{"$nulls":3},"Os08g0531000","Os08g0174500","Os01g0192000","Os01g0192000",4.5031657,2.8330657,null,"Os11g0645400",12.038795,"Os03g0228200",-4.467912,null,"osa-miR439b",0,-2.965744,null,"Os08g0174500",0,-1.6632209,null,"Os03g0818800",0,-1.0689335,null,"Os04g0683700",0,-1.505579,null,"Os01g0127700",0,-0.977979,null,"Os01g0229400",0,2.7913215,null,"Os05g0438600",2.0235195,1.2552519,null,"D17","d17(t), dwf14, d17, htd1, OsCCD7, CCD7, D17/HTD1, HTD1, OsD17","DWARF SLENDER DWARF, TILLERING","slender dwarf, tillering dwarf, dwarf-17, high-tillering dwarf1, high-tillering dwarf 1, High-Tillering Dwarf1, High-Tillering Dwarf 1, catotenoid dioxygenase 7, carotenoid-cleaving dioxygenase 7, carotenoid cleavage dioxygenase 7, MAX3 ortholog",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0042594 - response to starvation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0009507 - chloroplast, GO:0010223 - secondary shoot formation, GO:0007275 - multicellular organismal development, GO:0016121 - carotene catabolic process, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0046685 - response to arsenic, GO:0046872 - metal ion binding, GO:0009733 - response to auxin stimulus","TO:0000370 - leaf width, TO:0000180 - spikelet fertility, TO:0000576 - stem length, TO:0000152 - panicle number, TO:0000136 - relative water content, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending, TO:0000163 - auxin sensitivity, TO:0000492 - leaf shape, TO:0000167 - cytokinin sensitivity, TO:0000011 - nitrogen sensitivity, TO:0001016 - relative chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000089 - panicle type","PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006023 - bundle sheath , PO:0009005 - root , PO:0009047 - stem ","Os04g0550600","LOC_Os04g46470.1",null,"Os10g0467800","Os11g0499600","Os08g0460000",4.8411865,7.935741,null,"FON1","OsFON1, fon1, OsRLCK219, RLCK219","FLORAL ORGAN NUMBER 1","floral organ number1, floral organ number 1, floral organ number-1, CLV1 orthologue, Receptor-like Cytoplasmic Kinase 219",6," Reproductive organ - panicle,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009888 - tissue development, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0004702 - receptor signaling protein serine/threonine kinase activity, GO:0005886 - plasma membrane, GO:0009934 - regulation of meristem structural organization, GO:0016021 - integral to membrane, GO:0030154 - cell differentiation, GO:0010080 - regulation of floral meristem growth, GO:0048316 - seed development, GO:0009887 - organ morphogenesis, GO:0048833 - specification of floral organ number, GO:0016020 - membrane, GO:0032940 - secretion by cell, GO:0004713 - protein tyrosine kinase activity","TO:0000653 - seed development trait, TO:0000145 - internode length, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000184 - seed anatomy and morphology trait, TO:0000346 - tiller number, TO:0000499 - flower anatomy and morphology trait, TO:0000225 - stamen number, TO:0000223 - pistil anatomy and morphology trait, TO:0000052 - primary branching of inflorescence, TO:0000621 - inflorescence development trait, TO:0000249 - leaf senescence","PO:0009049 - inflorescence , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009046 - flower , PO:0009030 - carpel , PO:0009036 - lodicule , PO:0009029 - stamen , PO:0000230 - inflorescence meristem , PO:0000229 - flower meristem , PO:0001083 - inflorescence development stage ","Os06g0717200","LOC_Os06g50340.1","Os07g0176600","Os05g0469600","Os08g0460000",4.8411865,7.935741,null,"AE1","ae1","AMYLOSE EXTENDER 1","amylose extender1, amylose extender 1, amylose extender-1",null," Seed - Physiological traits - Storage substances","GO:0007275 - multicellular organismal development, GO:0000271 - polysaccharide biosynthetic process","TO:0000196 - amylose content, TO:0000587 - endosperm quality, TO:0000098 - glutinous endosperm, TO:0000487 - endosperm color","PO:0009089 - endosperm ",null,null,"Os10g0554800","Os10g0554800","Os08g0460000",4.8411865,7.935741,null,"BC6","Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9, BC88, SDBC1, OsSDBC1","BRITTLE CULM 6","Brittle culm6, Brittle culm 6, Brittle culm-6, Cellulose synthase A catalytic subunit 9 [UDP-forming], Cellulose synthase A catalytic subunit 9, semi-dominant brittle culm 1",9," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005515 - protein binding, GO:0009651 - response to salt stress, GO:0052324 - cell wall cellulose biosynthetic process, GO:0016021 - integral to membrane, GO:0031225 - anchored to membrane, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0010410 - hemicellulose metabolic process, GO:0016020 - membrane, GO:0006950 - response to stress, GO:0007047 - cell wall organization, GO:0009834 - secondary cell wall biogenesis, GO:0009808 - lignin metabolic process, GO:0009610 - response to symbiotic fungus, GO:0008270 - zinc ion binding, GO:0005886 - plasma membrane, GO:0009642 - response to light intensity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009531 - secondary cell wall, GO:0048573 - photoperiodism, flowering, GO:0009409 - response to cold, GO:0030244 - cellulose biosynthetic process, GO:0016760 - cellulose synthase (UDP-forming) activity","TO:0000051 - stem strength, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0000061 - node shattering, TO:0000608 - sodium content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000333 - sugar content, TO:0006001 - salt tolerance, TO:0000227 - root length, TO:0000207 - plant height, TO:0000557 - secondary branch number, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0000168 - abiotic stress trait, TO:0000108 - leaf shattering","PO:0009047 - stem , PO:0025025 - root system , PO:0009049 - inflorescence , PO:0009025 - vascular leaf ","Os09g0422500 ","LOC_Os09g25490.1","Os03g0401300","Os05g0515600","Os04g0678700",6.5093646,12.208504,null,"D17","d17(t), dwf14, d17, htd1, OsCCD7, CCD7, D17/HTD1, HTD1, OsD17","DWARF SLENDER DWARF, TILLERING","slender dwarf, tillering dwarf, dwarf-17, high-tillering dwarf1, high-tillering dwarf 1, High-Tillering Dwarf1, High-Tillering Dwarf 1, catotenoid dioxygenase 7, carotenoid-cleaving dioxygenase 7, carotenoid cleavage dioxygenase 7, MAX3 ortholog",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0042594 - response to starvation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0009507 - chloroplast, GO:0010223 - secondary shoot formation, GO:0007275 - multicellular organismal development, GO:0016121 - carotene catabolic process, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0046685 - response to arsenic, GO:0046872 - metal ion binding, GO:0009733 - response to auxin stimulus","TO:0000370 - leaf width, TO:0000180 - spikelet fertility, TO:0000576 - stem length, TO:0000152 - panicle number, TO:0000136 - relative water content, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending, TO:0000163 - auxin sensitivity, TO:0000492 - leaf shape, TO:0000167 - cytokinin sensitivity, TO:0000011 - nitrogen sensitivity, TO:0001016 - relative chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000089 - panicle type","PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006023 - bundle sheath , PO:0009005 - root , PO:0009047 - stem ","Os04g0550600","LOC_Os04g46470.1","Os03g0401300","Os03g0401300","Os12g0292400",0,6.6509457,null,"Os05g0389000","Os04g0460600","Os11g0490600",6.2186036,3.9044907]
["Os01g0133900",null,"Os01g0360200",null,"Os05g0564400",null,"Os02g0217900","LOC_Os02g12610",-3.372493,"Os01g0670800","LOC_Os01g48060","ARF",{"$f":"VLOOKUP(K4,H:I, 2,FALSE)","v":1.0322542},null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os04g0337500","Transcript","moderately similar to ( 484) AT1G60730 | Symbols: | aldo/keto reductase family protein | chr1:22358613-22360082 REVERSEmoderately similar to ( 451) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 PRK10376 PRK09912 COG4989 PRK10625 COG1453 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",6.735754,{"$nulls":3},"Os12g0637400","Os12g0134300","Os01g0542700","Os01g0542700",-1.5437813,-1.0565652,null,"Os05g0190500",10.144649,"Os03g0785900",-4.12553,null,"osa-miR169f",0,-2.659211,null,"Os04g0665600",0,-1.3667952,null,"Os04g0444100",0,-1.0263926,null,"Os03g0818800",0,-1.0689335,null,"Os01g0117200",0,-2.0088966,null,"Os12g0292400",0,6.6509457,null,"Os01g0866400",-3.1494305,2.356459,null,"GL2","gl2","GLABROUS LEAF AND HULL 2","glabrous leaf and hull2, glabrous leaf and hull 2, glabrous leaf and hull-2",null," Vegetative organ - Leaf","GO:0030154 - cell differentiation"," - palea pubescence, TO:0000417 - lemma and palea pubescence, TO:0000055 - leaf lamina pubescence","PO:0009037 - lemma , PO:0009038 - palea , PO:0020039 - leaf lamina ",{"$nulls":3},"Os01g0750300","Os04g0552300","Os02g0148000",0,6.6167235,null,"PLA1","pla1, OsPLA1, plt1, CYP78A11","PLASTOCHRON 1","plastochron1, plastochron 1, plastochron-1, Cytochrome P450 78A11, Protein PLASTOCHRON1",10," Vegetative organ - Leaf,  Reproductive organ - panicle,  Heterochrony,  Coloration - Anthocyanin","GO:0009055 - electron carrier activity, GO:0051781 - positive regulation of cell division, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0020037 - heme binding, GO:0048366 - leaf development, GO:0009739 - response to gibberellin stimulus, GO:0009740 - gibberellic acid mediated signaling","TO:0000659 - phyllochron, TO:0000730 - mitotic cell cycle trait, TO:0000369 - vegetative growth time, TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching, TO:0002638 - shoot meristem development, TO:0000166 - gibberellic acid sensitivity","PO:0020122 - inflorescence axis , PO:0020148 - shoot apical meristem , PO:0001083 - inflorescence development stage ","Os10g0403000","LOC_Os10g26340.1","Os08g0460000","Os11g0141900","Os02g0148000",0,6.6167235,null,"AE2","ae2(t), ae2","AMYLOSE EXTENDER 2","amylose extender2, amylose extender 2, amylose extender-2",null," Seed - Physiological traits - Storage substances","GO:0007275 - multicellular organismal development, GO:0000271 - polysaccharide biosynthetic process","TO:0000196 - amylose content, TO:0000487 - endosperm color, TO:0000098 - glutinous endosperm, TO:0000587 - endosperm quality","PO:0009089 - endosperm ",null,null,"Os03g0401300","Os03g0401300","Os08g0189200",3.7809398,5.8566914,null,"BL5","bl5","BROWN LEAF SPOT 5","brown leaf spot5, brown leaf spot 5, brown leaf spot-5",null," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000326 - leaf color, TO:0000063 - mimic response, TO:0000069 - variegated leaf","PO:0009025 - vascular leaf ",null,null,"Os05g0455200","Os05g0135500","Os05g0135500",7.861364,9.636413,null,"FON2","fon2, FON4, OsFON4, FON2/FON4, TG1","FLORAL ORGAN NUMBER 2","floral organ number2, floral organ number 2, floral organ number-2, floral organ number4, floral organ number 4, twin-grain1, twin-grain 1",11," Reproductive organ - Heading date,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0030154 - cell differentiation, GO:0019827 - stem cell maintenance, GO:0009887 - organ morphogenesis, GO:0007275 - multicellular organismal development, GO:0005576 - extracellular region, GO:0009888 - tissue development","TO:0000499 - flower anatomy and morphology trait, TO:0002759 - grain number, TO:0000445 - seed number, TO:0006038 - floral organ number","PO:0009046 - flower ","Os11g0595400","LOC_Os11g38270.1","Os05g0455200","Os05g0455200","Os12g0274700",0,4.865291,null,"Os01g0866400","Os02g0743400","Os01g0511600",0,3.882858]
["Os01g0819100",null,"Os01g0955100",null,"Os11g0638000",null,"Os02g0574100","LOC_Os02g36450",-3.042162,"Os01g0753500","LOC_Os01g54990","ARF",1.6797137,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os09g0546900","Transcript","very weakly similar to (99.4) AT5G27780 | Symbols: | auxin-responsive family protein | chr5:9838885-9839313 REVERSE protein|OsSAUR53 - Auxin-responsive SAUR gene family member, expressed",1.039621,{"$nulls":3},"Os01g0941800","Os01g0127700","Os01g0685400","Os01g0685400",1.7438254,-1.3034965,null,"Os09g0483100",9.84637,"Os05g0527000",-3.971136,null,"osa-miR439g",0,-2.5014517,null,"Os02g0134300",0,-1.9522705,null,"Os01g0174000",0,1.4943272,null,"Os07g0568300",0,-0.9563233,null,"Os07g0678600",0,-1.0833645,null,"Os01g0174000",0,1.4943272,null,"Os09g0422500",3.34322,1.567009,null,"HLB","Hlb, Hl2","HAIRY LEAF-B","Hairy leaf-b, Hairy leaf-2",null," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000055 - leaf lamina pubescence","PO:0020039 - leaf lamina ",null,null,"LOC_Os10g26340.1","Os11g0490600","Os11g0141900","Os10g0467800",7.1616282,6.027947,null,"NAL1","nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4","NARROW LEAF 1","narrow leaf1, narrow leaf 1, narrow leaf-1, curl leaf-1, Green for photosysthesis, SPIKELET NUMBER",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003824 - catalytic activity, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0008152 - metabolic process","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0000089 - panicle type, TO:0000262 - panicle shape, TO:0000495 - chlorophyll content, TO:0000370 - leaf width, TO:0000396 - grain yield, TO:0000456 - spikelet number, TO:0000492 - leaf shape, TO:0000346 - tiller number","PO:0009025 - vascular leaf , PO:0020103 - flag leaf ","Os04g0615000","LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","Os03g0725200","Os12g0138500","Os07g0176600",5.045758,5.1052637,null,"AGR1","agr1*, agr1","AGRAVITROPISM 1","agravitropism1, agravitropism 1, agravitropism-1",null," Seed - Morphological traits - Embryo","GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0009630 - gravitropism, GO:0007275 - multicellular organismal development","TO:0000064 - embryo related trait, TO:0000419 - leaf anatomy and morphology trait, TO:0000043 - root anatomy and morphology trait","PO:0009005 - root , PO:0009009 - plant embryo , PO:0009025 - vascular leaf ",null,null,"Os03g0123500","Os03g0123500","Os08g0189300",2.5801365,4.864809,null,"BL6","bl6","BROWN LEAF SPOT 6","brown leaf spot6, brown leaf spot 6, brown leaf spot-6",null," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os08g0473900","Os04g0554800","Os09g0538000",0,8.038064,null,"FZP","fzp*, fzp, OsBD1, BD1, OsERF#078, OsERF078, OsERF78, ERF78, AP2/EREBP#133, AP2/EREBP133, BFL1, SGDP7, OsSGDP7","FRIZZY PANICLE","frizzy panicle, BRANCHED SILKLESS 1 homolog, ethylene response factor 78, APETALA2/ethylene-responsive element binding protein 133, BRANCHED FLORETLESS 1, FRIZZLE PANICLE, Small Grain and Dense Panicle 7",7," Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0010582 - floral meristem determinacy, GO:0003700 - transcription factor activity, GO:0010073 - meristem maintenance, GO:0010074 - maintenance of meristem identity, GO:0006351 - transcription, DNA-dependent, GO:0010093 - specification of floral organ identity, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0048497 - maintenance of floral organ identity, GO:0045449 - regulation of transcription","TO:0000152 - panicle number, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000456 - spikelet number, TO:0000499 - flower anatomy and morphology trait, TO:0000262 - panicle shape, TO:0000089 - panicle type, TO:0002759 - grain number, TO:0000621 - inflorescence development trait","PO:0009046 - flower , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os07g0669500","LOC_Os07g47330.1","Os08g0473900","Os08g0473900","Os03g0131900",2.6137898,4.6295643,null,"Os03g0123300","Os03g0411100","Os01g0118300",4.094637,3.5051796]
["Os10g0492400",null,"Os01g0955500",null,"Os03g0246800",null,"Os05g0555600","LOC_Os05g48200",-2.5385206,"Os02g0182100","LOC_Os02g08500","ARR-B",-1.0548993,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0556400","Transcript","moderately similar to ( 307) AT3G61750 | Symbols: | auxin-responsive protein -related | chr3:22857897-22859254 REVERSE B561 protein|auxin-responsive protein, putative, expressed",5.386839,{"$nulls":3},"Os07g0681200","Os01g0117200","Os01g0915600","Os01g0915600",1.4386014,1.1191101,null,"Os01g0878900",9.735756,"Os03g0724500",-3.4332333,null,"osa-miR439c",0,-1.9445199,null,"Os02g0643800",0,-0.9625449,null,"Os03g0198600",0,1.6825858,null,"Os02g0683500",0,-1.3406903,null,"Os05g0194900",0,-1.7165629,null,"Os03g0841800",0,1.6212746,null,"Os02g0134300",0,-1.9522705,null,"PLA1","pla1, OsPLA1, plt1, CYP78A11","PLASTOCHRON 1","plastochron1, plastochron 1, plastochron-1, Cytochrome P450 78A11, Protein PLASTOCHRON1",10," Vegetative organ - Leaf,  Reproductive organ - panicle,  Heterochrony,  Coloration - Anthocyanin","GO:0009055 - electron carrier activity, GO:0051781 - positive regulation of cell division, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0020037 - heme binding, GO:0048366 - leaf development, GO:0009739 - response to gibberellin stimulus, GO:0009740 - gibberellic acid mediated signaling","TO:0000659 - phyllochron, TO:0000730 - mitotic cell cycle trait, TO:0000369 - vegetative growth time, TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching, TO:0002638 - shoot meristem development, TO:0000166 - gibberellic acid sensitivity","PO:0020122 - inflorescence axis , PO:0020148 - shoot apical meristem , PO:0001083 - inflorescence development stage ","Os10g0403000","LOC_Os10g26340.1",null,"Os12g0541300","Os12g0138500","Os01g0750300",6.3130035,5.462513,null,"EUI1","eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, OsEUI","ELONGATED UPPERMOST INTERNODE 1","elongated uppermost internode, elongated uppermost internode-1, Elongation of Upper most Internode, ELONGATED UPPERMOST INTERNODE1, dwarf Eui1",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0009826 - unidimensional cell growth, GO:0009651 - response to salt stress, GO:0022900 - electron transport chain, GO:0007275 - multicellular organismal development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0004497 - monooxygenase activity, GO:0009685 - gibberellin metabolic process, GO:0010106 - cellular response to iron ion starvation, GO:0010229 - inflorescence development, GO:0045487 - gibberellin catabolic process, GO:0032940 - secretion by cell","TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0002675 - gibberellic acid content, TO:0000576 - stem length, TO:0000224 - iron sensitivity, TO:0000207 - plant height, TO:0001002 - inflorescence exsertion, TO:0000040 - panicle length, TO:0006001 - salt tolerance","PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0007089 - stem elongation stage , PO:0007112 - 1 main shoot growth stage , PO:0001083 - inflorescence development stage ","Os05g0482400","LOC_Os05g40384.1","Os10g0163040","Os02g0753500","Os01g0668100",0,3.9767025,null,"AM","Am(t)*, Am","HIGH AMYLOSE","High amylose",null," Seed - Physiological traits - Storage substances","GO:0016051 - carbohydrate biosynthetic process","TO:0000098 - glutinous endosperm, TO:0000196 - amylose content","PO:0009089 - endosperm ",null,null,"Os08g0460000","Os08g0460000","Os02g0657000",3.3227575,4.613399,null,"BPH5","bph5","BROWN PLANTHOPPER RESISTANCE 5","brown planthopper resistance 5, brown planthopper resistance-5",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os10g0163040","Os08g0380100","Os01g0294700",0,7.996718,null,"D2","d2, dwf2, CYP90D2, D2/CYP90D2, OsD2, SMG11, OsSMG11, D2/SMG11","DWARF EBISU","ebisu dwarf, dwarf-2, cytochrome P450 CYP90D2, Ebisu dwarf/Dwarf2, Dwarf2, SMALL GRAIN 11",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0016132 - brassinosteroid biosynthetic process, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007275 - multicellular organismal development, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009753 - response to jasmonic acid stimulus, GO:0016021 - integral to membrane, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000391 - seed size, TO:0000262 - panicle shape, TO:0000040 - panicle length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000567 - tiller angle, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000299 - leaf lamina color, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000132 - basal internode diameter",null,"Os01g0197100","LOC_Os01g10040.1, LOC_Os01g10040.2","Os10g0163040","Os10g0163040","Os01g0511600",0,3.882858,null,"Os11g0490600","Os04g0431700","Os08g0224300",3.2541883,2.7845814]
["Os04g0683600",null,"Os02g0158100",null,"Os01g0229400",null,"Os10g0580400","LOC_Os10g42960",-2.238878,"Os02g0683500","LOC_Os02g45850","B3",-1.3406903,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os10g0510500","Transcript","very weakly similar to (85.9) AT2G46690 | Symbols: | auxin-responsive family protein | chr2:19180904-19181269 FORWARD protein|CPuORF40 - conserved peptide uORF-containing transcript, expressed",-1.1871086,{"$nulls":3},"Os05g0189900","Os07g0678600","Os02g0128200","Os02g0128200",2.9702263,1.7083406,null,"Os01g0868900",9.720016,"Os02g0217900",-3.372493,null,"osa-miR416",0,-1.8653711,null,"Os02g0683500",0,-1.3406903,null,"Os02g0594800",0,1.3745664,null,"Os01g0229400",0,2.7913215,null,"Os04g0671200",0,-1.2848374,null,"Os02g0831500",0,2.583096,{"$nulls":5},"YSL","ysl","YELLOW LEAF SPOT","yellow leaf spot",null," Vegetative organ - Leaf","GO:0015996 - chlorophyll catabolic process","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"LOC_Os01g10040.1, LOC_Os01g10040.2","Os01g0914400","Os01g0795400","Os11g0267000",0,4.978439,null,"RFS","rfs, cul7, OsRFS, OsCHR729, CHR729, CHR4, OsCHR4, CRL6, OsCRL, OsCHR4/CHR729, PKR1, OsPHD32, PHD32","ROLLED FINE STRIPED LEAF","rolled fine striped leaf, curl leaf-7, Rolled Fine Striped, CHD-related gene 729, Chromatin Remodeling 4, crown rootless6, crown rootless 6, PICKLE RELATED1, Plant homeo-domain finger protein 32, PHD finger protein 32",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0016571 - histone methylation, GO:0048366 - leaf development, GO:0040029 - regulation of gene expression, epigenetic, GO:0009555 - pollen development, GO:0048364 - root development, GO:0016570 - histone modification, GO:0015995 - chlorophyll biosynthetic process, GO:0007275 - multicellular organismal development, GO:0005524 - ATP binding, GO:0044030 - regulation of DNA methylation, GO:0010025 - wax biosynthetic process, GO:0009658 - chloroplast organization, GO:0008270 - zinc ion binding, GO:0004386 - helicase activity, GO:0003677 - DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0007623 - circadian rhythm","TO:0000605 - hydrogen peroxide content, TO:0000069 - variegated leaf, TO:0000085 - leaf rolling, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000590 - grain weight, TO:0000449 - grain yield per plant, TO:0002759 - grain number, TO:0002616 - flowering time, TO:0000547 - primary branch number, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000656 - root development trait, TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000207 - plant height, TO:0000420 - fertility related trait, TO:0000326 - leaf color, TO:0000040 - panicle length, TO:0000370 - leaf width, TO:0000492 - leaf shape","PO:0005020 - vascular bundle , PO:0004006 - mesophyll cell , PO:0009025 - vascular leaf , PO:0001050 - leaf development stage , PO:0001007 - pollen development stage , PO:0007520 - root development stage , PO:0025424 - vascular tissue development stage , PO:0009015 - portion of vascular tissue ","Os07g0497100","LOC_Os07g31450.1","Os09g0442100","Os01g0127200","Os03g0637800",0,3.504902,null,"APD1","apd1, apd1*","APICAL DISPLACEMENT 1","apical displacement1, apical displacement 1, apical displacement-1",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis, GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000370 - leaf width, TO:0000064 - embryo related trait, TO:0000492 - leaf shape","PO:0009009 - plant embryo , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence ",null,null,"Os09g0510500","Os09g0510500","Os08g0531000",2.6291068,4.5972238,null,"BPH6","Bph6, OsBPH6","BROWN PLANTHOPPER RESISTANCE 6","brown planthopper resistance 6, Brown planthopper resistance-6",4," Tolerance and resistance - Insect resistance","GO:0080036 - regulation of cytokinin mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0000145 - exocyst, GO:0045921 - positive regulation of exocytosis, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009625 - response to insect","TO:0000205 - white-backed planthopper resistance, TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os04g0431700","LOC_Os04g35210.1","Os09g0441900","Os10g0552600","Os08g0460000",4.8411865,7.935741,null,"D10","d10(d15,d16), d16, d15, dwf9, d10, OsCCD8b, OsCCD8, CCD8, OsD10","DWARF 'KIKEIBANSHINRIKI OR TOYOHIKARIBUNWAI TILLERING","kikeibanshinriki or toyohikaribunwai tillering dwarf, dwarf-10, carotenoid cleavage dioxygenase 8, DWARF 10, DWARF10, carotenoid cleavage dioxygenase 8b",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009570 - chloroplast stroma, GO:0009507 - chloroplast, GO:0007623 - circadian rhythm, GO:0010223 - secondary shoot formation, GO:0042594 - response to starvation, GO:0046685 - response to arsenic, GO:0009965 - leaf morphogenesis, GO:0009826 - unidimensional cell growth, GO:0009735 - response to cytokinin stimulus, GO:0016121 - carotene catabolic process, GO:0009926 - auxin polar transport, GO:0009733 - response to auxin stimulus, GO:0009691 - cytokinin biosynthetic process, GO:0030154 - cell differentiation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0016124 - xanthophyll catabolic process, GO:0046872 - metal ion binding","TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000145 - internode length, TO:0001016 - relative chlorophyll content, TO:0001013 - lateral root number, TO:0002688 - leaf lamina joint bending, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000476 - growth hormone content, TO:0000167 - cytokinin sensitivity, TO:0000136 - relative water content, TO:0002660 - cytokinin content, TO:0000011 - nitrogen sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000339 - stem thickness, TO:0000326 - leaf color, TO:0000586 - seminal root length","PO:0009006 - shoot system , PO:0020142 - stem internode , PO:0006343 - axillary shoot system , PO:0009047 - stem , PO:0009049 - inflorescence ","Os01g0746400","LOC_Os01g54270.1","Os09g0441900","Os09g0441900","Os02g0593500",0,3.7982666,null,"Os07g0186000","Os09g0114500","Os12g0548300",2.3556337,2.6423004]
["Os03g0335500",null,"Os02g0247800",null,"Os07g0408500",null,"Os09g0489500","LOC_Os09g31390",-2.236131,"Os07g0273700","LOC_Os07g17230","B3",4.3932843,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os06g0499500","Transcript","highly similar to ( 564) AT1G28130 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido synthetase | chr1:9826379-9827883 FORWARDnearly identical (1191) GH37_ORYSA Probable indole-3-acetic acid-amido synthetase GH3.7 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 7) (OsGH3-7) - Oryza sativa (Rice)GH3 protein|OsGH3.7 - Probable indole-3-acetic acid-amido synthetase, expressed",1.0032129,{"$nulls":3},"Os05g0190500","Os01g0650200","Os02g0247100","Os02g0247100",5.8978066,4.0527945,null,"Os04g0644400",9.671291,"Os05g0196100",-3.3338306,null,"osa-miR397a",0,-1.8473768,null,"Os01g0174000",0,1.4943272,null,"Os04g0477500",0,1.3472666,null,"Os05g0533600",0,1.0277737,null,"Os08g0126300",-1.3604058,-1.3236626,null,"Os12g0274700",0,4.865291,{"$nulls":5},"D2","d2, dwf2, CYP90D2, D2/CYP90D2, OsD2, SMG11, OsSMG11, D2/SMG11","DWARF EBISU","ebisu dwarf, dwarf-2, cytochrome P450 CYP90D2, Ebisu dwarf/Dwarf2, Dwarf2, SMALL GRAIN 11",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0016132 - brassinosteroid biosynthetic process, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007275 - multicellular organismal development, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009753 - response to jasmonic acid stimulus, GO:0016021 - integral to membrane, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000391 - seed size, TO:0000262 - panicle shape, TO:0000040 - panicle length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000567 - tiller angle, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000299 - leaf lamina color, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000132 - basal internode diameter",null,"Os01g0197100","LOC_Os01g10040.1, LOC_Os01g10040.2",null,"Os03g0123500","Os08g0473600","Os01g0914400",5.7845006,4.6522336,null,"GE1","ge1, ge, CYP78A13, OsCYP78A13, GE, BG2, GES, OsGE/CYP78B5, CYP78B5, OsCYP78B5","GIANT EMBRYO 1","giant embryo1, giant embryo 1, giant embryo, big grain2, Cytochrome P450 78A13, GIANT EMBRYO, super-giant embryo",7," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity","GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0010229 - inflorescence development, GO:0006521 - regulation of cellular amino acid metabolic process, GO:0043467 - regulation of generation of precursor metabolites and energy, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0080113 - regulation of seed growth, GO:0020037 - heme binding, GO:0019216 - regulation of lipid metabolic process, GO:0009960 - endosperm development","TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000064 - embryo related trait, TO:0000193 - embryo shape, TO:0000113 - giant embryo, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage ","Os07g0603700","LOC_Os07g41240.1","Os08g0130000","Os11g0233800","Os02g0170000",1.3603277,2.769395,null,"CLE1","cle*, cle1","CLUB-SHAPED EMBRYO 1","club-shaped embryo1, club-shaped embryo 1, club-shaped embryo-1",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os05g0455200","Os05g0455200","Os03g0819600",4.391084,4.5862184,null,"BPH7","bph7","BROWN PLANTHOPPER RESISTANCE 7","brown planthopper resistance 7, brown planthopper resistance-7",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os08g0224300","Os10g0467800","Os06g0289900",0,7.8760147,null,"LAX1","lax, lax(lx), LAX1, lx, OsbHLH123, OsLAX1","LAX PANICLE 1","lax panicle, Transcription factor LAX PANICLE, lax panicle1, basic helix-loop-helix protein 123, LAX PANICLE1",1," Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0045449 - regulation of transcription, GO:0030528 - transcription regulator activity, GO:0007275 - multicellular organismal development, GO:0006350 - transcription, GO:0005634 - nucleus","TO:0000089 - panicle type, TO:0000501 - spikelet weight, TO:0000436 - spikelet sterility, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000152 - panicle number, TO:0000456 - spikelet number","PO:0009049 - inflorescence , PO:0009051 - spikelet ","Os01g0831000","LOC_Os01g61480.1","Os08g0224300","Os08g0224300","Os03g0637800",0,3.504902,null,"Os12g0548300","Os09g0529300","Os01g0866400",-3.1494305,2.356459]
["Os03g0127700",null,"Os02g0588300",null,"Os05g0552300",null,"Os12g0129700","LOC_Os12g03594",-2.2358558,"Os01g0566701","LOC_Os01g38610","bHLH",2.377971,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194900","Transcript","moderately similar to ( 357) AT3G25290 | Symbols: | auxin-responsive family protein | chr3:9208955-9210353 FORWARD B561 DUF568 protein|membrane protein, putative, expressed",-1.1955652,{"$nulls":3},"Os01g0191200","Os05g0548900","Os02g0654400","Os02g0654400",-1.1157728,-0.97860146,null,"Os09g0483500",9.076649,"Os11g0668300",-3.3038952,null,"osa-miR169m",0,-1.6987382,null,"Os02g0744900",0,4.0255523,null,"Os01g0668100",0,3.9767025,null,"Os01g0524500",0,2.2737515,null,"Os01g0919800",-4.09928,-2.1748767,null,"Os04g0234600",0,3.3669853,{"$nulls":5},"RL4","rl4(rl2), rl2, rl4, cul11","ROLLED LEAF 4","rolled leaf4, rolled leaf 4, rolled leaf-4, curl leaf-11",1," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000085 - leaf rolling","PO:0009025 - vascular leaf ",{"$nulls":3},"Os08g0460000","Os08g0151300","Os03g0131900",2.6137898,4.6295643,null,"PDC1","pdc1*, pdc1, pdc4, pdc 1, PDC 1, RRJ2, OsPDC1","PYRUVATE DECARBOXYLASE 1","pyruvate decarboxylase-1, Pyruvate decarboxylase isozyme 1, Pyruvate Decarboxylase 1",5," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0004737 - pyruvate decarboxylase activity, GO:0000287 - magnesium ion binding, GO:0009536 - plastid, GO:0010229 - inflorescence development, GO:0030976 - thiamin pyrophosphate binding, GO:0009413 - response to flooding","TO:0000621 - inflorescence development trait, TO:0000114 - flooding related trait","PO:0001083 - inflorescence development stage ","Os05g0469600","LOC_Os05g39310.1","Os02g0663300","Os02g0781900","Os10g0573000",0,2.759031,null,"DU2","du2","DULL ENDOSPERM 2","dull endosperm2, dull endosperm 2, dull endosperm-2",null," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000105 - dull endosperm, TO:0000196 - amylose content","PO:0009089 - endosperm ",null,null,"Os03g0819600","Os03g0819600","Os11g0530600",3.9305646,4.57839,null,"BPH8","bph8","BROWN PLANTHOPPER RESISTANCE 8","brown planthopper resistance 8, brown planthopper resistance-8",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os05g0389000","Os04g0678700","Os03g0368900",4.013238,7.180881,null,"D14","d14(d10), dwf13, d10, d14, D88, HTD2, OsD14, qPPB3, D88/D14, HTD4","DWARF KAMIKAWABUNWAI TILLERING","kamikawabunwai tillering dwarf, dwarf-14, DWARF14, dwarf 14, Dwarf 88, HIGH-TILLERING DWARF 2, Primary panicle branch number 3, high-tillering dwarf 4",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0009755 - hormone-mediated signaling, GO:0007275 - multicellular organismal development, GO:0016787 - hydrolase activity, GO:0042594 - response to starvation, GO:0009610 - response to symbiotic fungus","TO:0000207 - plant height, TO:0000011 - nitrogen sensitivity, TO:0002688 - leaf lamina joint bending, TO:0002639 - shoot branching, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000576 - stem length, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0000544 - mesocotyl length, TO:0000329 - tillering ability, TO:0000339 - stem thickness","PO:0006343 - axillary shoot system , PO:0009047 - stem ","Os03g0203200","LOC_Os03g10620.1, LOC_Os03g10620.3, LOC_Os03g10620.2","Os05g0389000","Os05g0389000","Os04g0234600",0,3.3669853,null,"Os02g0154200","Os05g0530500","Os05g0389000",3.2207673,2.0078347]
["Os04g0616700",null,"Os02g0733500",null,"Os07g0408100",null,"Os03g0725200","LOC_Os03g51530",-2.226667,"Os01g0915600","LOC_Os01g68700","bHLH",1.1191101,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os01g0618100","Transcript","moderately similar to ( 394) AT1G60690 | Symbols: | aldo/keto reductase family protein | chr1:22349892-22351668 REVERSEmoderately similar to ( 372) A115_TOBAC Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) Tas Aldo_ket_red ARA1 COG4989 PRK10376 COG1453 PRK09912 PRK10625 dkgB protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed",1.3380041,{"$nulls":3},"Os01g0720400","Os03g0819900","Os03g0135700","Os03g0135700",5.4800797,2.1326425,null,"Os02g0308800",9.052826,"Os11g0625900",-3.2918835,null,"osa-miR439e",0,-1.6978077,null,"Os02g0635000",0,1.2736211,null,"Os01g0715400",0,1.0224143,null,"Os03g0841800",0,1.6212746,null,"Os01g0165000",0,-0.9488856,null,"Os05g0211100",0,1.6188742,{"$nulls":5},"D10","d10(d15,d16), d16, d15, dwf9, d10, OsCCD8b, OsCCD8, CCD8, OsD10","DWARF 'KIKEIBANSHINRIKI OR TOYOHIKARIBUNWAI TILLERING","kikeibanshinriki or toyohikaribunwai tillering dwarf, dwarf-10, carotenoid cleavage dioxygenase 8, DWARF 10, DWARF10, carotenoid cleavage dioxygenase 8b",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009570 - chloroplast stroma, GO:0009507 - chloroplast, GO:0007623 - circadian rhythm, GO:0010223 - secondary shoot formation, GO:0042594 - response to starvation, GO:0046685 - response to arsenic, GO:0009965 - leaf morphogenesis, GO:0009826 - unidimensional cell growth, GO:0009735 - response to cytokinin stimulus, GO:0016121 - carotene catabolic process, GO:0009926 - auxin polar transport, GO:0009733 - response to auxin stimulus, GO:0009691 - cytokinin biosynthetic process, GO:0030154 - cell differentiation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0016124 - xanthophyll catabolic process, GO:0046872 - metal ion binding","TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000145 - internode length, TO:0001016 - relative chlorophyll content, TO:0001013 - lateral root number, TO:0002688 - leaf lamina joint bending, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000476 - growth hormone content, TO:0000167 - cytokinin sensitivity, TO:0000136 - relative water content, TO:0002660 - cytokinin content, TO:0000011 - nitrogen sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000339 - stem thickness, TO:0000326 - leaf color, TO:0000586 - seminal root length","PO:0009006 - shoot system , PO:0020142 - stem internode , PO:0006343 - axillary shoot system , PO:0009047 - stem , PO:0009049 - inflorescence ","Os01g0746400","LOC_Os01g54270.1",null,"Os09g0510500","Os04g0600900","Os03g0819600",4.391084,4.5862184,null,"PRL5","OsGA20ox4, ga20ox4, GA20ox2, Prl5, Prl5/GA20ox4, OsPrl5","PANICLE RACHIS LENGTH 5","rice GA 20-oxidase4, GA 20-oxidase 4, gibberellin C-20 oxidase 4, Putative gibberellin 20-dioxygenase 4, PANICLE RACHIS LENGTH5",5," Biochemical character,  Reproductive organ - panicle","GO:0016491 - oxidoreductase activity, GO:0016216 - isopenicillin-N synthase activity, GO:0017000 - antibiotic biosynthetic process, GO:0004181 - metallocarboxypeptidase activity, GO:0009685 - gibberellin metabolic process, GO:0005506 - iron ion binding, GO:0006508 - proteolysis","TO:0000599 - enzyme activity, TO:0000040 - panicle length, TO:0000357 - growth and development trait",null,"Os05g0421900","LOC_Os05g34854.2, LOC_Os05g34854.1","Os04g0685900","Os08g0562500","Os06g0693200",0,2.631947,null,"DU3","du3, OsCBP20, OsCBP20/du3, CBP20","DULL ENDOSPERM 3","dull endosperm3, dull endosperm 3, dull endosperm-3, dull 3, cap-binding protein 20",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0045292 - nuclear mRNA cis splicing, via spliceosome, GO:0005737 - cytoplasm, GO:0031053 - primary microRNA processing, GO:0009651 - response to salt stress, GO:0005846 - nuclear cap binding complex, GO:0005976 - polysaccharide metabolic process, GO:0006370 - mRNA capping, GO:0006970 - response to osmotic stress, GO:0000166 - nucleotide binding, GO:0000339 - RNA cap binding, GO:0009568 - amyloplast starch grain, GO:0000394 - RNA splicing, via endonucleolytic cleavage and ligation, GO:0005634 - nucleus","TO:0000432 - temperature response trait, TO:0000615 - abscisic acid sensitivity, TO:0000429 - salt sensitivity, TO:0000196 - amylose content, TO:0000105 - dull endosperm, TO:0000095 - osmotic response sensitivity","PO:0009089 - endosperm ","Os02g0612300","LOC_Os02g39890.1, LOC_Os02g39890.2","Os11g0530600","Os11g0530600","Os01g0322700",0,4.014314,null,"BPH9","Bph9, BPH9/26","BROWN PLANTHOPPER RESISTANCE 9","brown planthopper resistance 9, Brown planthopper resistance-9",12," Tolerance and resistance - Insect resistance","GO:0009863 - salicylic acid mediated signaling pathway, GO:0043531 - ADP binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance, TO:0000172 - jasmonic acid sensitivity","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os07g0505200","Os01g0750300","Os12g0291400",0,7.0811596,null,"FC1","fc1, OsTB1, tb1, OsTB1/FC1, Os TB1, TB1, OsFC1","FINE CULM 1","fine culm1, fine culm 1, fine culm-1, lateral branching-1(t), teosinte-branching 1, Fine culm 1, teosinte branched1 protein, teosinte branched 1 protein, transcription factor OsTB1, teosinte branched1, FINE CULM1",3," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009725 - response to hormone stimulus, GO:0007623 - circadian rhythm, GO:0048831 - regulation of shoot development, GO:0009735 - response to cytokinin stimulus, GO:0007275 - multicellular organismal development, GO:0009733 - response to auxin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0007049 - cell cycle, GO:0030528 - transcription regulator activity, GO:0005634 - nucleus","TO:0000339 - stem thickness, TO:0000163 - auxin sensitivity, TO:0000027 - culm number, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000401 - plant growth hormone sensitivity, TO:0000152 - panicle number, TO:0000661 - tiller bud dormancy, TO:0000396 - grain yield, TO:0000167 - cytokinin sensitivity, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching","PO:0025034 - leaf , PO:0000055 - bud , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0007041 - inflorescence emergence stage , PO:0004709 - axillary bud , PO:0006343 - axillary shoot system ","Os03g0706500 ","LOC_Os03g49880.1","Os07g0505200","Os07g0505200","Os07g0505200",2.836643,3.3461637,null,"Os01g0118300","Os08g0407200","Os02g0152900",0,1.8932557]
["Os11g0308800",null,"Os03g0130500",null,"Os01g0540300",null,"Os12g0431100","LOC_Os12g24320",-2.2190163,"Os01g0952800","LOC_Os01g72370","bHLH",-1.7507919,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os03g0194600","Transcript","weakly similar to ( 102) AT5G48750 | Symbols: | auxin-responsive protein, putative | chr5:19770052-19770819 REVERSE DUF568 protein|AIR12, putative, expressed",-2.172973,{"$nulls":3},"Os03g0238600","Os05g0194900","Os03g0413000","Os03g0413000",1.837555,3.2168026,null,"Os08g0459400",8.579358,"Os02g0601500",-3.1112576,null,"osa-miR169l",0,-1.4804888,null,"Os02g0562700",0,1.3901037,null,"Os04g0470600",0,1.0198911,null,"Os05g0204600",0,1.7392745,null,"Os08g0345700",2.1321049,-1.2344389,null,"Os04g0469800",0,2.068486,{"$nulls":5},"RL1","rl1, cul8","ROLLED LEAF 1","rolled leaf1, rolled leaf 1, rolled leaf-1, curl leaf-8",1," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000180 - spikelet fertility, TO:0000085 - leaf rolling, TO:0000492 - leaf shape, TO:0000370 - leaf width","PO:0009025 - vascular leaf , PO:0009051 - spikelet ",null,null,"LOC_Os03g05390.13, LOC_Os03g05390.12, LOC_Os03g05390.11, LOC_Os03g05390.10, LOC_Os03g05390.9, LOC_Os03g05390.8, LOC_Os03g05390.7, LOC_Os03g05390.6, LOC_Os03g05390.5, LOC_Os03g05390.4, LOC_Os03g05390.3, LOC_Os03g05390.2, LOC_Os03g05390.1","Os03g0819600","Os02g0630300","Os08g0435900",0,4.3340163,null,"SGD2","HOX3, Oshox3, OsHox3","SMALL GRAIN AND DWARF 2","rice homeobox gene 3, Homeobox-leucine zipper protein HOX3, Homeodomain transcription factor HOX3, HD-ZIP protein HOX3, Small Grain and Dwarf 2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0030371 - translation repressor activity, GO:0016049 - cell growth, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0002675 - gibberellic acid content, TO:0002689 - leaf sheath length, TO:0000207 - plant height, TO:0000241 - leaf number, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000346 - tiller number, TO:0006020 - shoot apical meristem development, TO:0000734 - grain length","PO:0009005 - root , PO:0020141 - stem node , PO:0025395 - floral organ ","Os01g0643600","LOC_Os01g45570.1","Os05g0103200","Os06g0232300","Os08g0546300",0,2.626156,null,"DU5","du5","DULL ENDOSPERM 5","dull endosperm5, dull endosperm 5, dull endosperm-5",null," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009089 - endosperm ",null,null,"Os08g0473900","Os08g0473900","Os03g0123500",4.8892865,3.811927,null,"BSV","Bsv(Bs), Bs, Bsv","BLACK STREAKED DWARF RESISTANCE","Black streaked dwarf resistance",null," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000020 - black streak dwarf virus resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os03g0123300","Os11g0490600","Os01g0850700",0,6.7043138,null,"NAL1","nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4","NARROW LEAF 1","narrow leaf1, narrow leaf 1, narrow leaf-1, curl leaf-1, Green for photosysthesis, SPIKELET NUMBER",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003824 - catalytic activity, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0008152 - metabolic process","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0000089 - panicle type, TO:0000262 - panicle shape, TO:0000495 - chlorophyll content, TO:0000370 - leaf width, TO:0000396 - grain yield, TO:0000456 - spikelet number, TO:0000492 - leaf shape, TO:0000346 - tiller number","PO:0009025 - vascular leaf , PO:0020103 - flag leaf ","Os04g0615000","LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","Os03g0123300","Os03g0123300","Os08g0473900",3.8398027,3.305474,null,"Os05g0438600","Os05g0150500","Os10g0554200",0,1.6377968]
["Os03g0773700",null,"Os03g0715600",null,"Os02g0632500",null,"Os07g0258400","LOC_Os07g15460",-2.169833,"Os02g0433600","LOC_Os02g23823","bHLH",-1.2790259,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os07g0475700","Transcript","protein|OsSAUR30 - Auxin-responsive SAUR gene family member, expressed",1.9867239,{"$nulls":3},"Os05g0191700","Os01g0254100","Os03g0852300","Os03g0852300",-2.2671444,-1.1165094,null,"Os11g0241700",8.5280695,"osa-miR439d",-3.0436947,null,"osa-miR393",0,-1.0916387,null,"Os03g0337600",0,2.157176,null,"Os04g0469800",0,2.068486,null,"Os02g0831500",0,2.583096,null,"Os01g0224700",-4.1785526,-3.0126324,null,"Os03g0711100",0,2.263133,{"$nulls":5},"RL5","rl5(rl3), rl5, rl3, cul12","ROLLED LEAF 5","rolled leaf5, rolled leaf 5, rolled leaf-5, curl leaf-12",3," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000370 - leaf width, TO:0000085 - leaf rolling, TO:0000492 - leaf shape","PO:0009025 - vascular leaf ",{"$nulls":3},"Os05g0563000","Os02g0568200","Os02g0744900",0,4.0255523,null,"MADS24","OsMADS24, MADS8, OsMADS8, OsMADS8/24","MADS BOX GENE24","MADS box gene24, MADS-box protein 24, MADS-box transcription factor 8",9," Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006350 - transcription, GO:0030154 - cell differentiation, GO:0010229 - inflorescence development, GO:0010582 - floral meristem determinacy, GO:0005634 - nucleus, GO:0005515 - protein binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0043565 - sequence-specific DNA binding, GO:0009908 - flower development","TO:0000622 - flower development trait, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000245 - pollen free, TO:0000621 - inflorescence development trait, TO:0002616 - flowering time, TO:0006023 - lodicule development trait, TO:0006009 - lodicule anatomy and morphology trait, TO:0006012 - carpel anatomy and morphology trait","PO:0025585 - floral organ formation stage , PO:0001048 - palea development stage , PO:0001047 - lemma development stage , PO:0001049 - lodicule development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage ","Os09g0507200","LOC_Os09g32948.1","Os03g0856700","Os05g0589700","Os01g0140100",0,2.615424,null,"EML1","eml1","EMBRYOLESS 1","embryoless1",null," Seed - Morphological traits - Embryo","GO:0009266 - response to temperature stimulus, GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development",{"$nulls":4},"Os08g0189200","Os08g0189200","Os10g0554800",5.6397414,3.6116307,null,"BZS","bzs, bol","BENTAZON SUSCEPTIBILITY","bentazon susceptibility",null," Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide","TO:0000058 - herbicide sensitivity","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os03g0131900","Os03g0146800","Os12g0292400",0,6.6509457,null,"D11","d11(d8), dwf10, d8, D11/CYP724B1, d11, CYP724B1, GNS4, OsD11, PMM1, OsPMM1, PMM1/D11, NBG4, OsCPB1, CPB1, CPB1/D11","DWARF SHINKANEAIKOKU OR NOHRIN 28","shinkaneaikoku or nohrin 28 dwarf, DWARF SHINKANEAIKOKU OR NOHRIN 28, OsDWARF11, dwarf-11, Cytochrome P450 724B1, Dwarf protein 11, cytochrome P450 CYP724B1, DWARF11, grain number and size on chromosome 4, Panicle Morphology Mutant 1, Notched Belly Grain 4, CLUSTERED PRIMARY BRANCH 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0022900 - electron transport chain, GO:0006879 - cellular iron ion homeostasis, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling, GO:0048573 - photoperiodism, flowering, GO:0010029 - regulation of seed germination, GO:0051512 - positive regulation of unidimensional cell growth, GO:0016020 - membrane, GO:0009055 - electron carrier activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009826 - unidimensional cell growth, GO:0006826 - iron ion transport, GO:0009647 - skotomorphogenesis, GO:0008199 - ferric iron binding, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000206 - leaf angle, TO:0000455 - seed set percent, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000484 - seed shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000592 - 1000-dehulled grain weight, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000371 - yield trait, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0002730 - grain shape, TO:0000052 - primary branching of inflorescence, TO:0000396 - grain yield, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000456 - spikelet number, TO:0000391 - seed size, TO:0000329 - tillering ability, TO:0000397 - grain size, TO:0000139 - grains per panicle, TO:0000641 - primary branch length, TO:0000557 - secondary branch number, TO:0000501 - spikelet weight, TO:0000050 - inflorescence branching, TO:0000576 - stem length, TO:0000207 - plant height","PO:0020142 - stem internode , PO:0020122 - inflorescence axis , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009010 - seed , PO:0006321 - primary inflorescence branch ","Os04g0469800","LOC_Os04g39430.2, LOC_Os04g39430.1","Os03g0131900","Os03g0131900","Os03g0175800",0,2.9263191,null,"Os08g0224300","Os01g0127200","Os09g0422500",3.34322,1.567009]
["Os06g0274500",null,"Os03g0808600",null,"Os05g0390100",null,"Os03g0764900","LOC_Os03g55610",-2.1698039,"Os02g0603600","LOC_Os02g39140","bHLH",-1.372179,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os05g0437200","Transcript","moderately similar to ( 260) AT1G43130 | Symbols: LCV2 | LCV2 (LIKE COV 2) | chr1:16228661-16231158 REVERSEDUF502 COG2928 protein|protein of unknown function DUF502 domain containing protein, expressed",-1.0361265,{"$nulls":3},"Os03g0189400","Os01g0949700","Os04g0397500","Os04g0397500",1.5498586,1.9183289,null,"Os06g0639800",8.474277,"Os01g0540800",-3.0436947,null,"osa-miR166e",0,1.1793008,null,"Os06g0107700",0,2.1411397,null,"Os06g0712700",0,1.468964,null,"Os03g0238600",0,1.3971219,null,"Os05g0460000",-2.195695,-1.8242869,null,"Os02g0174100",0,1.9949021,{"$nulls":5},"Z3","OsZ3, z3, SIET4, OsSIET4","ZEBRA 3","zebra3, zebra 3, zebra-3, silicon efflux transporter 4, Si efflux transporter 4",3," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Coloration - Others,  Seed - Morphological traits","GO:0015995 - chlorophyll biosynthetic process, GO:0055085 - transmembrane transport, GO:0007275 - multicellular organismal development, GO:0016021 - integral to membrane, GO:0048573 - photoperiodism, flowering, GO:0015746 - citrate transport","TO:0000486 - seed color, TO:0000069 - variegated leaf, TO:0000326 - leaf color, TO:0000339 - stem thickness, TO:0000495 - chlorophyll content, TO:0002616 - flowering time","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009051 - spikelet ","Os03g0147400","LOC_Os03g05390.11, LOC_Os03g05390.10, LOC_Os03g05390.9, LOC_Os03g05390.13, LOC_Os03g05390.12, LOC_Os03g05390.8, LOC_Os03g05390.7, LOC_Os03g05390.6, LOC_Os03g05390.5, LOC_Os03g05390.4, LOC_Os03g05390.3, LOC_Os03g05390.2, LOC_Os03g05390.1",null,"Os01g0118300","Os01g0802700","Os11g0490600",6.2186036,3.9044907,null,"SPY","OsSPY","SPINDLY","Spindly, Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY",8," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Reproductive organ - panicle","GO:0005634 - nucleus, GO:0009739 - response to gibberellin stimulus, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0005488 - binding, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0009740 - gibberellic acid mediated signaling","TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000201 - panicle color, TO:0000145 - internode length, TO:0000152 - panicle number, TO:0000166 - gibberellic acid sensitivity, TO:0000547 - primary branch number, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000576 - stem length, TO:0006032 - panicle size","PO:0000230 - inflorescence meristem , PO:0009049 - inflorescence , PO:0020142 - stem internode ","Os08g0559300","LOC_Os08g44510.1","Os12g0178633","Os02g0450000","Os07g0686800",0,2.5641897,null,"EML1","eml1*, eml1","EMBRYOLESS 1","embryoless1, embryoless 1, embryoless-1",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000432 - temperature response trait, TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os02g0762600","Os02g0762600","Os09g0510500",4.8006577,3.5891144,null,"CE","Ce, Ce1, Ce2","CERCOSPORA RESISTANCE","Cercospora resistance, Cercospora resistance-1, Cercospora resistance-2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000422 - narrow brown leaf spot disease resistance","PO:0009025 - vascular leaf ",null,null,"Os04g0645100","Os12g0541300","Os10g0552700",3.6247933,6.5124984,null,"SPR3","Spr3(t), Spr3","SPREADING PANICLE 3","Spreading panicle3, Spreading panicle-3",4," Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development","TO:0000089 - panicle type","PO:0009049 - inflorescence ",null,null,"Os04g0645100","Os04g0645100","Os01g0229400",0,2.7913215,null,"Os09g0422500","Os03g0325600","Os02g0154200",2.3735273,1.4195126]
["Os01g0127700",null,"Os06g0254700",null,"Os03g0796800",null,"Os02g0702100","LOC_Os02g47370",-2.1104476,"Os02g0691500","LOC_Os02g46560","bHLH",3.364888,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0643800","Transcript","very weakly similar to (84.0) AT2G45210 | Symbols: | auxin-responsive protein-related | chr2:18641884-18642372 FORWARDAuxin_inducible protein|OsSAUR11 - Auxin-responsive SAUR gene family member, expressed",-0.9625449,{"$nulls":3},"Os11g0210300","Os04g0606000","Os04g0602300","Os04g0602300",-1.6645269,-1.2535847,null,"Os05g0456300",8.402199,"Os02g0574100",-3.042162,null,"osa-miR166a",0,1.3536214,null,"Os05g0405000",0,1.3920685,null,"Os01g0206700",0,1.3550063,null,"Os05g0405000",0,1.3920685,null,"Os03g0341000",4.300297,-1.8170595,null,"Os02g0220400",0,1.3303136,{"$nulls":5},"DRP3","drp3","DRIPPING-WET LEAF 3","dripping-wet leaf3, dripping-wet leaf 3, dripping-wet leaf-3",3," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",{"$nulls":3},"Os01g0600900","Os12g0106300","Os01g0511600",0,3.882858,null,"SNB","AP2/EREBP#073, AP2/EREBP73, AP2-3, SSH1, OsSSH1, OsSNB, DLN181, DLN181a, DLN181b, OsDLN181, OsDLN181a, OsDLN181b, SUI4, OsSUI4, SUI4/SNB","SUPERNUMERARY BRACT GENE","Supernumerary Bract gene, Supernumerary Bract, SUPERNUMERARY BRACT, supernumerary bract, transcription factor; SNB, APETALA2/ethylene-responsive element binding protein 73, APETALA2-3, suppression of shattering1, DLN repressor 181, DLN motif protein 181, shortened uppermost internode 4",7," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0009736 - cytokinin mediated signaling, GO:0009740 - gibberellic acid mediated signaling, GO:0009908 - flower development, GO:0010077 - maintenance of inflorescence meristem identity, GO:0005634 - nucleus, GO:0045449 - regulation of transcription, GO:0009832 - plant-type cell wall biogenesis, GO:0080006 - internode patterning, GO:0010022 - meristem determinacy, GO:0003700 - transcription factor activity, GO:0048506 - regulation of timing of meristematic phase transition, GO:0010092 - specification of organ identity","TO:0000225 - stamen number, TO:0000207 - plant height, TO:0000209 - palea number, TO:0000671 - pre-flowering flower abortion, TO:0006032 - panicle size, TO:0000436 - spikelet sterility, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000391 - seed size, TO:0006030 - spikelet meristem identity, TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000622 - flower development trait, TO:0000650 - lemma length, TO:0000208 - lemma number, TO:0000499 - flower anatomy and morphology trait, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009034 - flower bract , PO:0009036 - lodicule , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0235800","LOC_Os07g13170.2, LOC_Os07g13170.1","Os01g0670800","Os01g0659900","Os04g0620600",1.1912769,2.4121397,null,"ENL1","enl1","ENDOSPERMLESS 1","endospermless1, endospermless 1, endospermless-1, SNF2 family helicase ENL1",4," Seed - Morphological traits - Endosperm","GO:0005634 - nucleus, GO:0007059 - chromosome segregation, GO:0005737 - cytoplasm, GO:0007067 - mitosis, GO:0009960 - endosperm development, GO:0009790 - embryonic development, GO:0000280 - nuclear division, GO:0009653 - anatomical structure morphogenesis","TO:0000113 - giant embryo, TO:0000231 - endospermless, TO:0000064 - embryo related trait, TO:0000587 - endosperm quality","PO:0009009 - plant embryo , PO:0009089 - endosperm , PO:0007633 - endosperm development stage ","Os04g0692750","LOC_Os04g59624.1, LOC_Os04g59624.2, LOC_Os04g59624.3","Os01g0805600","Os01g0805600","Os03g0637800",0,3.504902,null,"CHT4","Cht4(t)*(Chi4), Chi4, Cht4, OsChia2b, Chi-4, CHIT2, OsCHIT2, PR3, OsPR3","CHITINASE 4","Chitinase4, Chitinase IIb, Chitinase 4, Pathogenesis related (PR)-3 chitinase 4, Chitinase-4, PR-3 CLASS IV CHITINASE, Chitinase-4(novel type)",4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0008061 - chitin binding, GO:0051707 - response to other organism, GO:0016998 - cell wall macromolecule catabolic process, GO:0004568 - chitinase activity, GO:0009738 - abscisic acid mediated signaling, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium, GO:0006032 - chitin catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000175 - bacterial blight disease resistance",null,"Os04g0493400","LOC_Os04g41620.1","Os02g0198300","Os04g0121100","Os03g0251000",0,6.1875587,null,"FLO2","flo2, flo3(t), Osflo2, Osflo3(t), Osflo-2, flo-2","FLOURY ENDOSPERM 2","floury endosperm2, floury endosperm 2, floury endosperm-2, Floury 2",4," Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0005976 - polysaccharide metabolic process, GO:0005829 - cytosol, GO:0009085 - lysine biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009568 - amyloplast starch grain","TO:0000162 - seed quality, TO:0000615 - abscisic acid sensitivity, TO:0000104 - floury endosperm, TO:0000490 - protein composition related trait, TO:0000196 - amylose content, TO:0000266 - chalky endosperm, TO:0000397 - grain size, TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000105 - dull endosperm","PO:0009089 - endosperm ","Os04g0645100","LOC_Os04g55230.1","Os02g0198300","Os02g0198300","Os08g0224300",3.2541883,2.7845814,null,"Os10g0554200","Os05g0140100","Os05g0438600",2.0235195,1.2552519]
["Os03g0221700",null,"Os07g0108800",null,"Os03g0277000",null,"Os01g0667000","LOC_Os01g47670",-2.1051662,"Os03g0135700","LOC_Os03g04310","bHLH",2.1326425,null,"17.2.3","hormone metabolism.auxin.induced-regulated-responsive-activated","Os02g0158800","Transcript","highly similar to ( 824) AT3G26370 | Symbols: | unknown protein | chr3:9656886-9659741 FORWARDDUF246 protein|growth regulator related protein, putative, expressed",1.3208412,{"$nulls":3},"Os11g0210500","Os06g0274500","Os06g0662200","Os06g0662200",2.9997795,1.2566763,null,"Os11g0701000",8.388633,"Os01g0224700",-3.0126324,null,"osa-miR168b",0,1.9713985,null,"Os04g0234600",0,3.3669853,null,"Os07g0549600",0,1.4914767,null,"Os03g0826500",0,1.5269942,null,"Os02g0169300",0,-0.987922,null,"Os03g0778100",0,2.3129609,{"$nulls":5},"DRP4","drp4","DRIPPING-WET LEAF 4","dripping-wet leaf4, dripping-wet leaf 4, dripping-wet leaf-4",3," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",{"$nulls":3},"Os03g0416200","Os04g0271700","Os05g0227600",2.6376226,3.817176,null,"WRKY19","OsWRKY19","WRKY GENE 19","Rice WRKY gene19",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009790 - embryonic development, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0050832 - defense response to fungus","TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os05g0571200","LOC_Os05g49620.1","Os02g0170000","Os01g0726400","Os03g0130900",0,2.371442,null,"ENL1","enl1*","ENDOSPERMLESS 1","endospermless1",null," Seed - Morphological traits - Endosperm","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis",{"$nulls":4},"Os02g0657000","Os02g0657000","Os07g0505200",2.836643,3.3461637,null,"CTB","Ctb*, Ctb, Ctb1","COLD TOLERANCE AT THE BOOTING STAGE","Cold tolerance at the booting stage, Cold tolerance at booting stage-1",null," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os05g0129000","Os06g0131700","Os04g0554800",7.6038456,6.1735973,null,"D3","d3, dwf3, D3/OsMAX2, Os_F0760, SOL1, OsORE9, ORE9, MAX2, OsRFPH2-10, RFPH2-10, OsD3","DWARF BUNKETSUWAITO TILLERING","bunketsuwaito tillering dwarf, dwarf-3, F-box/LRR-repeat MAX2 homolog, F-box and leucine-rich repeat MAX2 homolog, DWARF 3, DWARF-3, suppressor of lazy1, DWARF3, ORESARA 9, MAX2 ortholog",6," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042594 - response to starvation, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0009926 - auxin polar transport, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009755 - hormone-mediated signaling, GO:0009851 - auxin biosynthetic process, GO:0010016 - shoot morphogenesis, GO:0010223 - secondary shoot formation, GO:0009959 - negative gravitropism, GO:0009646 - response to absence of light, GO:0009416 - response to light stimulus, GO:0009934 - regulation of meristem structural organization, GO:0009610 - response to symbiotic fungus","TO:0000586 - seminal root length, TO:0000370 - leaf width, TO:0000460 - light intensity sensitivity, TO:0002672 - auxin content, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000011 - nitrogen sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0001013 - lateral root number, TO:0000152 - panicle number, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0002693 - gravity response trait, TO:0000544 - mesocotyl length, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0006036 - stem elongation, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os06g0154200","LOC_Os06g06050.1","Os05g0129000","Os05g0129000","Os10g0573000",0,2.759031,null,"Os07g0603800","Os01g0856500","Os03g0123300",2.6666102,1.0072118]
["Os02g0193000",null,"Os07g0568600",null,"Os07g0239400",null,"Os01g0701700","LOC_Os01g50610",-2.0907042,"Os03g0782500","LOC_Os03g56950","bHLH",1.688983,null,"17.1.1","hormone metabolism.abscisic acid.synthesis-degradation","Os03g0250200","Transcript","moderately similar to ( 220) AT1G75700 | Symbols: HVA22G | HVA22G (HVA22-LIKE PROTEIN G) | chr1:28423956-28424931 FORWARD TB2_DP1_HVA22 protein|HVA22, putative, expressed",3.818896,{"$nulls":3},"Os04g0630100","Os12g0431100","Os07g0229700","Os07g0229700",3.8663642,3.2081091,null,"Os02g0538700",8.359303,"Os04g0516800",-2.9926445,null,"osa-miR159d",0,3.8974907,null,"Os08g0435900",0,4.3340163,null,"Os01g0224700",-4.1785526,-3.0126324,null,"Os01g0788800",0,1.2033843,null,"Os11g0490900",-1.6612319,-2.0225337,null,"Os06g0264200",0,2.6492913,{"$nulls":5},"NAL6","Nal6, Cul6","NARROW LEAF 6","Narrow leaf6, Narrow leaf 6, Narrow leaf-6, Curl leaf-6",3," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000492 - leaf shape, TO:0000370 - leaf width","PO:0009025 - vascular leaf ",{"$nulls":3},"Os01g0323300","Os11g0107000","Os03g0123500",4.8892865,3.811927,null,"MADS58","OsMADS58","MADS BOX GENE 58","MADS box gene58, MADS box gene 58, MADS-box transcription factor 58",5," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006350 - transcription, GO:0030154 - cell differentiation, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010582 - floral meristem determinacy, GO:0048445 - carpel morphogenesis, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding","TO:0000207 - plant height, TO:0000650 - lemma length, TO:0000622 - flower development trait, TO:0000621 - inflorescence development trait","PO:0000229 - flower meristem , PO:0007615 - flower development stage , PO:0001083 - inflorescence development stage ","Os05g0203800","LOC_Os05g11414.1","Os01g0892800","Os02g0730000","Os10g0163040",3.7016354,2.3213081,null,"ESP4","Esp4, 10/16-H","ENDOSPERM STORAGE PROTEIN 4","Endosperm storage protein4, Endosperm storage protein 4, regulatory gene for PB-I., Endosperm storage protein-4",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009089 - endosperm ",null,null,"Os09g0441900","Os09g0441900","Os03g0129300",2.203059,3.3167012,null,"CTS1","Cts1","COLD TOLERANCE AT SEEDLING STAGE 1","Cold tolerance at seedling stage1, Cold tolerance at seedling stage 1, Cold tolerance at seedling stage-1",null," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os12g0263000","Os10g0554800","Os10g0467800",7.1616282,6.027947,null,"D1","d1, GPA1, GA1, OsGA1, RGA1, dwf1, XA7, RGA, D1/RGA1, D89","DAIKOKU DWARF","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009725 - response to hormone stimulus, GO:0005525 - GTP binding, GO:0004871 - signal transducer activity, GO:0003924 - GTPase activity, GO:0009408 - response to heat, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0006952 - defense response, GO:0006471 - protein amino acid ADP-ribosylation, GO:0005834 - heterotrimeric G-protein complex, GO:0010038 - response to metal ion, GO:0009755 - hormone-mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007275 - multicellular organismal development, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling","TO:0000166 - gibberellic acid sensitivity, TO:0000080 - micronutrient sensitivity, TO:0000207 - plant height, TO:0000132 - basal internode diameter, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000299 - leaf lamina color, TO:0000303 - cold tolerance, TO:0000089 - panicle type, TO:0000734 - grain length, TO:0000326 - leaf color, TO:0002730 - grain shape, TO:0000615 - abscisic acid sensitivity, TO:0000576 - stem length, TO:0000158 - red light sensitivity, TO:0000040 - panicle length, TO:0000391 - seed size, TO:0000135 - leaf length, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000484 - seed shape, TO:0000259 - heat tolerance, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000455 - seed set percent, TO:0000397 - grain size","PO:0009049 - inflorescence , PO:0020039 - leaf lamina , PO:0020142 - stem internode , PO:0000003 - whole plant , PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os05g0333200","LOC_Os05g26890.1","Os12g0263000","Os12g0263000","Os06g0264200",0,2.6492913,null,"Os02g0134300","Os01g0350900","Os04g0460600",4.1927667,0]
["Os04g0370900",null,"Os07g0619200",null,"Os02g0312600",null,"Os02g0782500","LOC_Os02g54140",-2.0676515,"Os05g0139100","LOC_Os05g04740","bHLH",2.685197,null,"17.1.1.1.10","hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase","Os02g0704000","Transcript","highly similar to ( 605) AT4G19170 | Symbols: NCED4 | NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) | chr4:10481835-10483622 FORWARD RPE65 COG3670 protein|9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed",-2.4485574,{"$nulls":3},"Os06g0623300","Os11g0438700","Os08g0176900","Os08g0176900",-1.7066787,-1.2607719,null,"Os06g0142200",8.33086,"osa-miR439b",-2.965744,{"$nulls":5},"Os05g0211100",0,1.6188742,null,"Os04g0573900",-1.9732274,-1.538496,null,"Os08g0424500",0,1.1904254,null,"Os04g0665600",0,-1.3667952,null,"Os10g0580400",-2.7884464,-2.238878,{"$nulls":5},"AUL","aul","AURICLELESS","auricleless",4," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000226 - auricleless, TO:0000335 - ligule shape, TO:0000024 - ligule length","PO:0020106 - leaf sheath auricle ",{"$nulls":3},"Os11g0610900","Os04g0460600","Os01g0323300",3.810583,3.7481315,null,"WAK45","OsWAK45, OsRLCK143, RLCK143","WALL-ASSOCIATED KINASE GENE 45","Receptor-like Cytoplasmic Kinase 143",4," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0030247 - polysaccharide binding, GO:0005524 - ATP binding, GO:0005509 - calcium ion binding, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0368800 ","LOC_Os04g30010.1","Os09g0533600","Os01g0323100","Os01g0700200",0,2.221728,null,"FON1","OsFON1, fon1, OsRLCK219, RLCK219","FLORAL ORGAN NUMBER 1","floral organ number1, floral organ number 1, floral organ number-1, CLV1 orthologue, Receptor-like Cytoplasmic Kinase 219",6," Reproductive organ - panicle,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009888 - tissue development, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0004702 - receptor signaling protein serine/threonine kinase activity, GO:0005886 - plasma membrane, GO:0009934 - regulation of meristem structural organization, GO:0016021 - integral to membrane, GO:0030154 - cell differentiation, GO:0010080 - regulation of floral meristem growth, GO:0048316 - seed development, GO:0009887 - organ morphogenesis, GO:0048833 - specification of floral organ number, GO:0016020 - membrane, GO:0032940 - secretion by cell, GO:0004713 - protein tyrosine kinase activity","TO:0000653 - seed development trait, TO:0000145 - internode length, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000184 - seed anatomy and morphology trait, TO:0000346 - tiller number, TO:0000499 - flower anatomy and morphology trait, TO:0000225 - stamen number, TO:0000223 - pistil anatomy and morphology trait, TO:0000052 - primary branching of inflorescence, TO:0000621 - inflorescence development trait, TO:0000249 - leaf senescence","PO:0009049 - inflorescence , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009046 - flower , PO:0009030 - carpel , PO:0009036 - lodicule , PO:0009029 - stamen , PO:0000230 - inflorescence meristem , PO:0000229 - flower meristem , PO:0001083 - inflorescence development stage ","Os06g0717200","LOC_Os06g50340.1","Os05g0389000","Os05g0389000","Os08g0473900",3.8398027,3.305474,null,"CTS2","Cts2(t), Cts2","COLD TOLERANCE AT SEEDLING STAGE 2","Cold tolerance at seedling stage2, Cold tolerance at seedling stage 2, Cold tolerance at seedling stage-2",null," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0009025 - vascular leaf ",null,null,"Os05g0103200","Os03g0135700","Os05g0550300",4.8264666,6.0061736,null,"SE1","Se1(Lm,Lf,Rs,Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, BBX18, Hd1/OsA, OsCCT21, CCT21","PHOTOSENSITIVITY 1","Photosensitivity1, Photosensitivity 1, Photoperiod sensitivity 1, Heading date, Photoperiod-sensitivity-1, HEADING DATE 1, Arabidopsis CONSTANS(CO) gene ortholog, ortholog of Arabidopsis CONSTANS, B-box-containing protein 18, CCT domain-containing gene 21, CCT (CO, CO-LIKE and TOC1) domain protein 21, CCT domain protein 21",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0030154 - cell differentiation, GO:0009648 - photoperiodism, GO:0008270 - zinc ion binding, GO:0009266 - response to temperature stimulus, GO:0009908 - flower development, GO:0048571 - long-day photoperiodism, GO:0007623 - circadian rhythm, GO:0048572 - short-day photoperiodism, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009909 - regulation of flower development, GO:0010229 - inflorescence development","TO:0002759 - grain number, TO:0002616 - flowering time, TO:0000229 - photoperiod sensitivity, TO:0000075 - light sensitivity, TO:0000050 - inflorescence branching, TO:0000371 - yield trait, TO:0000448 - filled grain percentage, TO:0006032 - panicle size, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000469 - days to maturity, TO:0000432 - temperature response trait","PO:0009013 - portion of meristem tissue , PO:0009082 - spikelet floret , PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0025034 - leaf , PO:0007616 - flowering stage ","Os06g0275000","LOC_Os06g16370.1","Os05g0103200","Os05g0103200","Os01g0140100",0,2.615424,null,"Os04g0668900","Os06g0658900","Os05g0140100",4.1362944,0]
["Os04g0599000",null,"Os07g0619800",null,"Os08g0364900",null,"Os11g0490900","LOC_Os11g29870",-2.0225337,"Os07g0549600","LOC_Os07g36460","bHLH",1.4914767,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os11g0498600","Transcript","weakly similar to ( 150) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 160) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 YOP1 protein|HVA22, putative, expressed",2.6062984,{"$nulls":3},"Os03g0421800","Os04g0636100","Os09g0532900","Os09g0532900",3.715037,2.1058097,null,"Os05g0469600",8.226357,"Os10g0527800",-2.9627552,{"$nulls":5},"Os09g0346500",0,3.3939323,null,"Os03g0725200",3.7773674,-2.226667,null,"Os05g0139100",0,2.685197,null,"Os06g0667100",-1.7911767,-1.2620894,null,"Os01g0675800",-2.1810002,-1.7036854,{"$nulls":5},"DRP1","drp1","DRIPPING-WET LEAF 1","dripping-wet leaf1, dripping-wet leaf 1, dripping-wet leaf-1",4," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",null,null,"LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","Os02g0762600","Os02g0268600","Os09g0510500",4.8006577,3.5891144,null,"WAK77","OsWAK77, OsRLCK252, RLCK252","WALL-ASSOCIATED KINASE GENE 77","Receptor-like Cytoplasmic Kinase 252",8," Biochemical character,  Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000621 - inflorescence development trait","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os08g0365500","LOC_Os08g27780.1","Os04g0620600","Os05g0571200","Os05g0103200",2.04943,2.154865,null,"FZP","fzp*, fzp, OsBD1, BD1, OsERF#078, OsERF078, OsERF78, ERF78, AP2/EREBP#133, AP2/EREBP133, BFL1, SGDP7, OsSGDP7","FRIZZY PANICLE","frizzy panicle, BRANCHED SILKLESS 1 homolog, ethylene response factor 78, APETALA2/ethylene-responsive element binding protein 133, BRANCHED FLORETLESS 1, FRIZZLE PANICLE, Small Grain and Dense Panicle 7",7," Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0010582 - floral meristem determinacy, GO:0003700 - transcription factor activity, GO:0010073 - meristem maintenance, GO:0010074 - maintenance of meristem identity, GO:0006351 - transcription, DNA-dependent, GO:0010093 - specification of floral organ identity, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0048497 - maintenance of floral organ identity, GO:0045449 - regulation of transcription","TO:0000152 - panicle number, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000456 - spikelet number, TO:0000499 - flower anatomy and morphology trait, TO:0000262 - panicle shape, TO:0000089 - panicle type, TO:0002759 - grain number, TO:0000621 - inflorescence development trait","PO:0009046 - flower , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os07g0669500","LOC_Os07g47330.1","Os07g0505200","Os07g0505200","Os01g0805600",3.4144638,3.2416708,null,"D17","d17(t), dwf14, d17, htd1, OsCCD7, CCD7, D17/HTD1, HTD1, OsD17","DWARF SLENDER DWARF, TILLERING","slender dwarf, tillering dwarf, dwarf-17, high-tillering dwarf1, high-tillering dwarf 1, High-Tillering Dwarf1, High-Tillering Dwarf 1, catotenoid dioxygenase 7, carotenoid-cleaving dioxygenase 7, carotenoid cleavage dioxygenase 7, MAX3 ortholog",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0042594 - response to starvation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0009507 - chloroplast, GO:0010223 - secondary shoot formation, GO:0007275 - multicellular organismal development, GO:0016121 - carotene catabolic process, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0046685 - response to arsenic, GO:0046872 - metal ion binding, GO:0009733 - response to auxin stimulus","TO:0000370 - leaf width, TO:0000180 - spikelet fertility, TO:0000576 - stem length, TO:0000152 - panicle number, TO:0000136 - relative water content, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending, TO:0000163 - auxin sensitivity, TO:0000492 - leaf shape, TO:0000167 - cytokinin sensitivity, TO:0000011 - nitrogen sensitivity, TO:0001016 - relative chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000089 - panicle type","PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006023 - bundle sheath , PO:0009005 - root , PO:0009047 - stem ","Os04g0550600","LOC_Os04g46470.1","Os03g0856700","Os01g0897300","Os05g0515600",8.009467,5.9088807,null,"RFS","rfs, cul7, OsRFS, OsCHR729, CHR729, CHR4, OsCHR4, CRL6, OsCRL, OsCHR4/CHR729, PKR1, OsPHD32, PHD32","ROLLED FINE STRIPED LEAF","rolled fine striped leaf, curl leaf-7, Rolled Fine Striped, CHD-related gene 729, Chromatin Remodeling 4, crown rootless6, crown rootless 6, PICKLE RELATED1, Plant homeo-domain finger protein 32, PHD finger protein 32",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0016571 - histone methylation, GO:0048366 - leaf development, GO:0040029 - regulation of gene expression, epigenetic, GO:0009555 - pollen development, GO:0048364 - root development, GO:0016570 - histone modification, GO:0015995 - chlorophyll biosynthetic process, GO:0007275 - multicellular organismal development, GO:0005524 - ATP binding, GO:0044030 - regulation of DNA methylation, GO:0010025 - wax biosynthetic process, GO:0009658 - chloroplast organization, GO:0008270 - zinc ion binding, GO:0004386 - helicase activity, GO:0003677 - DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0007623 - circadian rhythm","TO:0000605 - hydrogen peroxide content, TO:0000069 - variegated leaf, TO:0000085 - leaf rolling, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000590 - grain weight, TO:0000449 - grain yield per plant, TO:0002759 - grain number, TO:0002616 - flowering time, TO:0000547 - primary branch number, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000656 - root development trait, TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000207 - plant height, TO:0000420 - fertility related trait, TO:0000326 - leaf color, TO:0000040 - panicle length, TO:0000370 - leaf width, TO:0000492 - leaf shape","PO:0005020 - vascular bundle , PO:0004006 - mesophyll cell , PO:0009025 - vascular leaf , PO:0001050 - leaf development stage , PO:0001007 - pollen development stage , PO:0007520 - root development stage , PO:0025424 - vascular tissue development stage , PO:0009015 - portion of vascular tissue ","Os07g0497100","LOC_Os07g31450.1","Os03g0856700","Os03g0856700","Os02g0831500",0,2.583096,null,"Os02g0152900","Os02g0819100","Os01g0127200",3.924364,0]
["Os12g0210400",null,"Os10g0539600",null,"Os02g0668500",null,"Os01g0117200","LOC_Os01g02780",-2.0088966,"Os08g0524800","LOC_Os08g41320","bHLH",1.7823194,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os04g0527000","Transcript","weakly similar to ( 183) AT5G08350 | Symbols: | GRAM domain-containing protein / ABA-responsive protein-related | chr5:2686417-2687175 REVERSE protein|GEM, putative, expressed",1.1323467,{"$nulls":3},"Os01g0243700","Os12g0297500","Os10g0531900","Os10g0531900",3.9181435,3.415385,null,"Os02g0814200",8.182705,"Os11g0626700",-2.956356,{"$nulls":5},"Os04g0613700",0,1.5049185,null,"Os08g0460000",4.8411865,7.935741,null,"Os04g0469800",0,2.068486,null,"Os08g0562200",-2.3479915,-0.9606611,null,"Os06g0275000",-1.3490849,-1.0695515,{"$nulls":5},"DRP8","drp8","DRIPPING-WET LEAF 8","dripping-wet leaf8, dripping-wet leaf 8, dripping-wet leaf-8",4," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",{"$nulls":3},"Os10g0163040","Os05g0518800","Os01g0600900",4.0118365,3.538292,null,"CCA1","OsCCA1, OsLHY, LHY, LHY-like_chr.8, COC1, DLN203, OsDLN203, LEM1, OsLEM1, Nhd1, OsNhd1","CIRCADIAN CLOCK ASSOCIATED 1","LATE ELONGATED HYPOCOTYL, DLN repressor 203, DLN motif protein 203, lvp1 enhancer mutant 1, N-mediated heading date1",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Heterochrony,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010228 - vegetative to reproductive phase transition, GO:0009743 - response to carbohydrate stimulus, GO:0050832 - defense response to fungus, GO:0007623 - circadian rhythm, GO:0042752 - regulation of circadian rhythm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0019740 - nitrogen utilization, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009730 - detection of carbohydrate stimulus, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0002616 - flowering time, TO:0000346 - tiller number","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0000055 - bud , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os08g0157600","LOC_Os08g06110.2, LOC_Os08g06110.5, LOC_Os08g06110.4, LOC_Os08g06110.3","Os06g0661400","Os12g0420300","Os03g0673600",0,2.0770724,null,"GLC","glc","GEL CONSISTENCY","gel consistency(hard), gel consistency",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000211 - gel consistency","PO:0009010 - seed ",null,null,"Os03g0123300","Os03g0123300","Os03g0175800",0,2.9263191,null,"DU3","du3, OsCBP20, OsCBP20/du3, CBP20","DULL ENDOSPERM 3","dull endosperm3, dull endosperm 3, dull endosperm-3, dull 3, cap-binding protein 20",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0045292 - nuclear mRNA cis splicing, via spliceosome, GO:0005737 - cytoplasm, GO:0031053 - primary microRNA processing, GO:0009651 - response to salt stress, GO:0005846 - nuclear cap binding complex, GO:0005976 - polysaccharide metabolic process, GO:0006370 - mRNA capping, GO:0006970 - response to osmotic stress, GO:0000166 - nucleotide binding, GO:0000339 - RNA cap binding, GO:0009568 - amyloplast starch grain, GO:0000394 - RNA splicing, via endonucleolytic cleavage and ligation, GO:0005634 - nucleus","TO:0000432 - temperature response trait, TO:0000615 - abscisic acid sensitivity, TO:0000429 - salt sensitivity, TO:0000196 - amylose content, TO:0000105 - dull endosperm, TO:0000095 - osmotic response sensitivity","PO:0009089 - endosperm ","Os02g0612300","LOC_Os02g39890.1, LOC_Os02g39890.2","Os01g0685400","Os07g0273700","Os08g0189200",3.7809398,5.8566914,null,"GE1","ge1, ge, CYP78A13, OsCYP78A13, GE, BG2, GES, OsGE/CYP78B5, CYP78B5, OsCYP78B5","GIANT EMBRYO 1","giant embryo1, giant embryo 1, giant embryo, big grain2, Cytochrome P450 78A13, GIANT EMBRYO, super-giant embryo",7," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity","GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0010229 - inflorescence development, GO:0006521 - regulation of cellular amino acid metabolic process, GO:0043467 - regulation of generation of precursor metabolites and energy, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0080113 - regulation of seed growth, GO:0020037 - heme binding, GO:0019216 - regulation of lipid metabolic process, GO:0009960 - endosperm development","TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000064 - embryo related trait, TO:0000193 - embryo shape, TO:0000113 - giant embryo, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage ","Os07g0603700","LOC_Os07g41240.1","Os01g0685400","Os01g0685400","Os01g0866400",-3.1494305,2.356459,null,"Os01g0511600","Os08g0537800","Os05g0373300",2.2896612,0]
["Os01g0171000",null,"Os12g0541300",null,"Os12g0155200",null,"Os10g0462900","LOC_Os10g32550",-1.9924326,"Os09g0510500","LOC_Os09g33580","bHLH",3.5891144,null,"17.1.3","hormone metabolism.abscisic acid.induced-regulated-responsive-activated","Os09g0450600","Transcript","weakly similar to ( 102) AT4G24960 | Symbols: ATHVA22D | ATHVA22D | chr4:12828401-12828982 FORWARDweakly similar to ( 114) HVA22_HORVU Protein HVA22 - Hordeum vulgare (Barley) TB2_DP1_HVA22 protein|HVA22, putative, expressed",1.2709488,{"$nulls":3},"Os06g0537700","Os04g0671200","Os10g0562100","Os10g0562100",-2.144032,-1.7148021,null,"Os03g0806800",8.163371,"Os03g0188100",-2.8997297,{"$nulls":5},"Os01g0227100",0,1.207028,null,"Os03g0856700",1.9106296,1.865975,null,"Os02g0174100",0,1.9949021,null,"Os10g0180800",0,-2.148242,null,"Os03g0764900",-3.6407013,-2.1698039,{"$nulls":5},"NAL1","nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4","NARROW LEAF 1","narrow leaf1, narrow leaf 1, narrow leaf-1, curl leaf-1, Green for photosysthesis, SPIKELET NUMBER",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003824 - catalytic activity, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0008152 - metabolic process","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0000089 - panicle type, TO:0000262 - panicle shape, TO:0000495 - chlorophyll content, TO:0000370 - leaf width, TO:0000396 - grain yield, TO:0000456 - spikelet number, TO:0000492 - leaf shape, TO:0000346 - tiller number","PO:0009025 - vascular leaf , PO:0020103 - flag leaf ","Os04g0615000","LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","MSU ID","Os05g0555600","Os02g0285300","Os01g0118300",4.094637,3.5051796,null,"FAD8","OsFAD8, Osfad8","OMEGA-3 FATTY ACID DESATURASE 8","w-3 fatty acid desaturase-8, chloroplast omega-3 fatty acid desaturase 8",7," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, GO:0009941 - chloroplast envelope, GO:0009409 - response to cold, GO:0006636 - unsaturated fatty acid biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0042389 - omega-3 fatty acid desaturase activity, GO:0004768 - stearoyl-CoA 9-desaturase activity","TO:0000040 - panicle length",null,"Os07g0693800 ","LOC_Os07g49310.1, LOC_Os07g49310.2","Os03g0640100","Os05g0370600","Os04g0685900",2.1874247,2.0713534,null,"GLE1","gle1*. gle1","GLOBULAR EMBRYO 1","globular embryo1, globular embryo 1, globular embryo-1",null," Seed - Morphological traits - Embryo","GO:0009888 - tissue development, GO:0009887 - organ morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os09g0442100","Os09g0442100","Os01g0229400",0,2.7913215,null,"DW2","dw2(fh2), dw2, fh2, FH2, OsFH2","DEEP WATER TOLERANCE 2","deep water tolerance2, deep water tolerance-2, Formin-like protein 2, formin homology 2, forming family protein 2, FH2 protein 2, FH2 domain protein 2",4," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0030036 - actin cytoskeleton organization, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009413 - response to flooding, GO:0003779 - actin binding","TO:0000103 - deepwater stress, TO:0000170 - elongation ability","PO:0000003 - whole plant ","Os04g0461800","LOC_Os04g38810.1","Os01g0633100","Os09g0482780","Os04g0305700",0,5.75091,null,"SPK","Spk(t), Spk(t)*), Spk, OsTAC1, TAC1, qTAC9","SPREADING STUB","Spreading stub, Tiller angle control 1",9," Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development","TO:0000567 - tiller angle, TO:0000427 - culm angle, TO:0000447 - filled grain number, TO:0000346 - tiller number, TO:0000396 - grain yield","PO:0009047 - stem ","Os09g0529300 ","LOC_Os09g35980.1, LOC_Os09g35980.2","Os01g0633100","Os01g0633100","Os03g0401300",4.925789,2.328625,null,null,"Os06g0706400","Os02g0743400",2.1346276,0]
["Os04g0672100",null,"Os12g0603800",null,"Os03g0843100",null,"Os06g0474800","LOC_Os06g28050",-1.9624877,"Os10g0544200","LOC_Os10g39750","bHLH",3.7744904,null,"17.3.1.1.1","hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2","Os01g0851600","Transcript","weakly similar to ( 163) AT2G38050 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase | chr2:15921303-15922176 REVERSE Steroid_dh protein|3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed",1.7856712,{"$nulls":3},"Os07g0510200","Os06g0195900","Os12g0510900","Os12g0510900",4.4667897,3.5731878,null,"Os05g0515600",8.009467,"Os04g0447700",-2.855882,{"$nulls":5},"Os05g0139100",0,2.685197,null,"Os05g0103200",2.04943,2.154865,null,"Os06g0133000",-1.9926609,-2.2645013,null,"Os04g0683700",0,-1.505579,null,"Os10g0562100",-2.144032,-1.7148021,{"$nulls":5},"NAL5","nal5(nal1), nal5, nal1, cul5","NARROW LEAF 5","narrow leaf5, narrow leaf 5, narrow leaf-5, curl leaf-5",4," Vegetative organ - Leaf","GO:0015995 - chlorophyll biosynthetic process, GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000299 - leaf lamina color, TO:0000370 - leaf width, TO:0000492 - leaf shape","PO:0009025 - vascular leaf , PO:0009047 - stem ",null,null,"LOC_Os04g39430.2, LOC_Os04g39430.1","Os09g0422500","Os01g0127200","Os03g0637800",0,3.504902,null,"GSN1","MKP1, OsMKP1, osmkp1, LARGE8, GLA1, OsGLA1","GRAIN SIZE AND NUMBER1","Oryza sativa Mitogen-Activated Protein Kinase Phosphatase 1, Mitogen-Activated Protein Kinase Phosphatase 1, MAPK phosphatase 1, large grain8, LARGE GRAIN 8, grain size and number1, grain size and number 1, grain length and awn 1",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008285 - negative regulation of cell proliferation, GO:0045595 - regulation of cell differentiation, GO:0006470 - protein amino acid dephosphorylation, GO:0048316 - seed development, GO:0004725 - protein tyrosine phosphatase activity, GO:0008138 - protein tyrosine/serine/threonine phosphatase activity, GO:0009651 - response to salt stress, GO:0016301 - kinase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0010225 - response to UV-C, GO:0033549 - MAP kinase phosphatase activity, GO:0042127 - regulation of cell proliferation, GO:0005737 - cytoplasm","TO:0000653 - seed development trait, TO:0000181 - seed weight, TO:0000547 - primary branch number, TO:0002660 - cytokinin content, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000557 - secondary branch number, TO:0000072 - awn length, TO:0002759 - grain number, TO:0006032 - panicle size","PO:0009066 - anther , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009047 - stem , PO:0009051 - spikelet , PO:0009039 - glume , PO:0025349 - awn ","Os05g0115800","LOC_Os05g02500.3, LOC_Os05g02500.2, LOC_Os05g02500.1","Os03g0172000","Os02g0586900","Os04g0469800",0,2.068486,null,"GLE2","gle2*, gle2","GLOBULAR EMBRYO 2","globular embryo2, globular embryo 2, globular embryo-2",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os08g0531000","Os08g0531000","Os10g0573000",0,2.759031,null,"DW3","dw3","DEEP WATER TOLERANCE 3","deep water tolerance3, deep water tolerance 3, deep water tolerance-3",null," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding","TO:0000170 - elongation ability, TO:0000103 - deepwater stress","PO:0000003 - whole plant ",null,null,"Os05g0481000","Os05g0406800","Os05g0408900",0,5.5856977,null,"EF1","Ef1 (Ef2), Ef2, Ef1, Ehd1, Eh1(t)*, EF1, ef1, qEHD-10-1(t) (qEhd1), OsRR30, OsRR22","EARLINESS 1","Earliness1, Earliness 1, Earliness-1, EARLY HEADING DATE 1, Early heading date1",10," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0009648 - photoperiodism, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0009908 - flower development, GO:0006350 - transcription, GO:0000156 - two-component response regulator activity, GO:2000028 - regulation of photoperiodism, flowering, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0000160 - two-component signal transduction system (phosphorelay), GO:0003677 - DNA binding","TO:0002759 - grain number, TO:0000469 - days to maturity, TO:0006032 - panicle size, TO:0000050 - inflorescence branching, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000229 - photoperiod sensitivity, TO:0000371 - yield trait","PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009013 - portion of meristem tissue , PO:0009049 - inflorescence ","Os10g0463400","LOC_Os10g32600.1","Os05g0481000","Os05g0481000","Os10g0163040",3.7016354,2.3213081,null,null,"Os05g0373300","Os04g0431700",2.0722134,0]
["Os01g0113200",null,"Os01g0191800",null,"Os02g0702600",null,"Os02g0134300","LOC_Os02g04160",-1.9522705,"Os01g0174000","LOC_Os01g07880","bZIP",1.4943272,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os02g0113200","Transcript","moderately similar to ( 455) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 466) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450, putative, expressed",3.5112286,{"$nulls":3},"Os07g0539100","Os11g0668300","Os05g0190500","Os05g0190500",10.144649,6.838286,null,"Os10g0204400",7.923153,"Os01g0176000",-2.8266761,{"$nulls":5},"Os04g0469800",0,2.068486,null,"Os01g0670800",1.4240936,1.0322542,null,"Os03g0764900",-3.6407013,-2.1698039,null,"Os03g0808600",-1.9889625,-0.9945205,null,"Os03g0146400",-2.0158217,-1.6110601,{"$nulls":5},"RL2","rl2, cul9","ROLLED LEAF 2","rolled leaf2, rolled leaf 2, rolled leaf-2, curl leaf-9",4," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000370 - leaf width, TO:0000085 - leaf rolling, TO:0000492 - leaf shape","PO:0009025 - vascular leaf ",{"$nulls":3},"Os09g0441900","Os01g0822900","Os09g0346500",0,3.3939323,null,"SG1","OsSG1, Sg1","SHORT GRAIN 1","SHORT GRAIN1, Short grain 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0008285 - negative regulation of cell proliferation, GO:0048316 - seed development","TO:0000397 - grain size, TO:0000370 - leaf width, TO:0000734 - grain length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000326 - leaf color, TO:0002677 - brassinosteroid sensitivity, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage ","Os09g0459200","LOC_Os09g28520.1","Os01g0114300","Os11g0556400","Os02g0663300",2.4848723,2.0438263,null,"GLE3","gle3*, gle3","GLOBULAR EMBRYO 3","globular embryo3, globular embryo 3, globular embryo-3",null," Seed - Morphological traits - Embryo","GO:0009888 - tissue development, GO:0009887 - organ morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os08g0189300","Os08g0189300","Os05g0139100",0,2.685197,null,"GLH1","Glh1","GREEN LEAFHOPPER RESISTANCE 1","Green leafhopper resistance1, Green leafhopper resistance 1, Green leafhopper resistance-1",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os06g0498400","Os02g0833900","Os01g0750300",6.3130035,5.462513,null,"SP1","sp, SP, OsNPF4.1, NPF4.1, OsSP1","SHORT PANICLE 1","short panicle, SHORT PANICLE, short panicle1, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 4.1",11," Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development","TO:0000089 - panicle type, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000040 - panicle length","PO:0009049 - inflorescence ","Os11g0235200","LOC_Os11g12740.1","Os06g0498400","Os06g0498400","Os03g0778100",0,2.3129609,null,null,"Os10g0562700","Os03g0411100",2.044784,0]
[null,null,"Os01g0206700",null,"Os10g0377400",null,"Os09g0484900","LOC_Os09g31130",-1.9309164,"Os01g0542700","LOC_Os01g36220","bZIP",-1.0565652,null,"17.3.1.2.3","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51","Os05g0211100","Transcript","moderately similar to ( 483) AT1G11680 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYP51G1 (CYTOCHROME P450 51G1); oxygen binding / sterol 14-demethylase | chr1:3938925-3940585 FORWARDmoderately similar to ( 486) CP51_SORBI Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) p450 CypX protein|cytochrome P450 51, putative, expressed",1.6188742,{"$nulls":3},"Os02g0532900","Os05g0450300","Os01g0878900","Os01g0878900",9.735756,9.539226,null,"Os09g0248900",7.9145284,"Os02g0774200",-2.8069408,{"$nulls":5},"Os02g0731700",0,1.7829956,{"$nulls":5},"Os02g0208900",1.2093801,-1.0023584,null,"Os07g0209000",-1.8521515,-1.5298886,null,"Os01g0685400",1.7438254,-1.3034965,{"$nulls":5},"D11","d11(d8), dwf10, d8, D11/CYP724B1, d11, CYP724B1, GNS4, OsD11, PMM1, OsPMM1, PMM1/D11, NBG4, OsCPB1, CPB1, CPB1/D11","DWARF SHINKANEAIKOKU OR NOHRIN 28","shinkaneaikoku or nohrin 28 dwarf, DWARF SHINKANEAIKOKU OR NOHRIN 28, OsDWARF11, dwarf-11, Cytochrome P450 724B1, Dwarf protein 11, cytochrome P450 CYP724B1, DWARF11, grain number and size on chromosome 4, Panicle Morphology Mutant 1, Notched Belly Grain 4, CLUSTERED PRIMARY BRANCH 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0022900 - electron transport chain, GO:0006879 - cellular iron ion homeostasis, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling, GO:0048573 - photoperiodism, flowering, GO:0010029 - regulation of seed germination, GO:0051512 - positive regulation of unidimensional cell growth, GO:0016020 - membrane, GO:0009055 - electron carrier activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009826 - unidimensional cell growth, GO:0006826 - iron ion transport, GO:0009647 - skotomorphogenesis, GO:0008199 - ferric iron binding, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000206 - leaf angle, TO:0000455 - seed set percent, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000484 - seed shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000592 - 1000-dehulled grain weight, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000371 - yield trait, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0002730 - grain shape, TO:0000052 - primary branching of inflorescence, TO:0000396 - grain yield, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000456 - spikelet number, TO:0000391 - seed size, TO:0000329 - tillering ability, TO:0000397 - grain size, TO:0000139 - grains per panicle, TO:0000641 - primary branch length, TO:0000557 - secondary branch number, TO:0000501 - spikelet weight, TO:0000050 - inflorescence branching, TO:0000576 - stem length, TO:0000207 - plant height","PO:0020142 - stem internode , PO:0020122 - inflorescence axis , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009010 - seed , PO:0006321 - primary inflorescence branch ","Os04g0469800","LOC_Os04g39430.2, LOC_Os04g39430.1",null,"Os05g0389000","Os05g0554400","Os04g0234600",0,3.3669853,null,"NRFG2","PFL, OsNRFG2","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 2","Protodermal Factor Like, neo-tetraploid rice fertility related gene 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000040 - panicle length, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait",null,"Os06g0553200","LOC_Os06g35970.1, LOC_Os06g35970.2","Os09g0133600","Os04g0481700","Os03g0856700",1.9106296,1.865975,null,"GLU2","Glu2*(Gt1), Gt1, Glu2","GLUTELIN 2","Rice glutelin2, Rice glutelin 2, Rice glutelin-2",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os03g0735000","Os03g0735000","Os02g0831500",0,2.583096,null,"GLH2","Glh2","GREEN LEAFHOPPER RESISTANCE 2","Green leafhopper resistance2, Green leafhopper resistance 2, Green leafhopper resistance-2",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os08g0115200","Os02g0236800","Os10g0552600",7.2442303,5.268088,null,"D27","d27(d t), dt, dwf23, d27, OsD27","DWARF BUNKETSUTO TILLERING","bunketsuto tillering dwarf, dwarf-27, DWARF27, DWARF 27, iron-binding protein D27, OsDWARF27",11," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0016859 - cis-trans isomerase activity, GO:0007275 - multicellular organismal development, GO:0042594 - response to starvation, GO:0009733 - response to auxin stimulus, GO:0009507 - chloroplast, GO:0005506 - iron ion binding, GO:0009735 - response to cytokinin stimulus","TO:0001013 - lateral root number, TO:0000163 - auxin sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity, TO:0000329 - tillering ability, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity","PO:0009047 - stem , PO:0009025 - vascular leaf , PO:0006343 - axillary shoot system ","Os11g0587000",null,"Os08g0115200","Os08g0115200","Os03g0711100",0,2.263133,null,null,"Os05g0389000","Os09g0529300",1.831159,0]
[null,null,"Os05g0332300",null,"Os05g0513800",null,"Os04g0538000","LOC_Os04g45480",-1.9123079,"Os02g0128200","LOC_Os02g03580","bZIP",1.7083406,null,"17.3.1.2.6","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF7","Os01g0134500","Transcript","moderately similar to ( 387) AT3G02580 | Symbols: STE1, DWF7, BUL1 | STE1 (STEROL 1); C-5 sterol desaturase | chr3:547048-548615 FORWARDmoderately similar to ( 387) SC5D_TOBAC Delta(7)-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta(7)-sterol-C5-desaturase) - Nicotiana tabacum (Common tobacco) protein|fatty acid hydroxylase, putative, expressed",2.5228798,{"$nulls":3},"Os01g0946600","Os10g0578200","Os05g0515600","Os05g0515600",8.009467,5.9088807,null,"Os05g0135500",7.861364,"Os09g0491772",-2.79547,{"$nulls":5},"Os03g0778100",0,2.3129609,{"$nulls":5},"Os10g0562100",-2.144032,-1.7148021,null,"Os04g0538000",0,-1.9123079,null,"Os08g0473900",3.8398027,3.305474,{"$nulls":5},"DRP5","drp5","DRIPPING-WET LEAF 5","dripping-wet leaf5, dripping-wet leaf 5, dripping-wet leaf-5",4," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",{"$nulls":3},"Os03g0315800","Os02g0324400","Os02g0810200",2.7290642,3.3432457,null,"SODCC2","Cu/Zn-SOD, Cu/Zn- SOD, OsSODB, OsSOD3, SodCc2, Os SodCc2, sodB, OsSodB, RSODB, OssodCc1, OsCSD1.1, CSD1.1, OsCDS1, OsSOD3-CU/Zn, SOD3-CU/Zn, CuZnSOD2, Cu/ZnSOD2, OsCu/ZnSOD2, OsCSD1, CSD1, CuZnSOD1","CYTOSOLIC SUPEROXIDASE DISMUTASE 2","Cu/Zn-superoxide dismutase, superoxide dismutase B, copper/zinc-superoxide dismutase, \\Cu, Zn superoxide dismutase\\\", cytosolic copper/zinc-superoxide dismutase 2, \\\"Superoxide dismutase (Cu-Zn) 4, cytosolic\\\", Cu-dependent SOD 1.1\"",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0019430 - removal of superoxide radicals, GO:0006979 - response to oxidative stress, GO:0012501 - programmed cell death, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0005507 - copper ion binding, GO:0004784 - superoxide dismutase activity, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0010039 - response to iron ion, GO:0009845 - seed germination","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0002657 - oxidative stress, TO:0000040 - panicle length, TO:0000447 - filled grain number","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage , PO:0005360 - aleurone layer ","Os07g0665200","LOC_Os07g46990.2, LOC_Os07g46990.1","Os04g0573900","Os09g0241100","Os07g0568700",0,1.8588246,null,"GLU3","Glu3*(Gt3), Gt3, Glu3","GLUTELIN 3","Rice glutelin3, Rice glutelin 3, Rice glutelin-3",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os04g0645100","Os04g0645100","Os08g0345800",2.1964571,2.5752084,null,"GLH4","glh4","GREEN LEAFHOPPER RESISTANCE 4","green leafhopper resistance4, green leafhopper resistance 4, green leafhopper resistance-4",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os04g0436100","Os03g0123500","Os04g0401000",0,5.193791,null,"HD5","Hd5(t)*, Hd5, qHD5, HAP3H, OsHAP3H, NF-YB, CBF-A, DTH8, qHD5(t)*, Ghd8, Ghd8/DTH8, Lhd1, NF-YB11, OsNF-YB11, NFYB11, LH8, DTH8/Ghd8, RH8, DTH8/Ghd8/LHD1, CAR8, DTH8/Ghd8/ OsHAP3H, EF8, OsEF8","Heading date (QTL)-5(t)","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0043565 - sequence-specific DNA binding, GO:0009648 - photoperiodism, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0010119 - regulation of stomatal movement","TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0002616 - flowering time, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000439 - fungal disease resistance, TO:0000522 - stomatal conductance, TO:0000447 - filled grain number",null,"Os08g0174500","LOC_Os08g07740.1","Os04g0436100","Os04g0436100","Os01g0680200",0,2.1909852,null,null,"Os01g0866400","Os01g0856500",1.1745979,0]
[null,null,"Os07g0150700",null,"Os02g0638900",null,"Os05g0530400","LOC_Os05g45410",-1.9081851,"Os02g0132500","LOC_Os02g03960","bZIP",-1.4448551,null,"17.3.1.2.7","hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF5","Os02g0465400","Transcript","highly similar to ( 575) AT1G50430 | Symbols: DWF5, PA, LE, ST7R, 7RED | DWF5 (DWARF 5); sterol delta7 reductase | chr1:18682175-18685555 REVERSE ERG4_ERG24 protein|delta14-sterol reductase, putative, expressed",-1.0864153,{"$nulls":3},"Os01g0739700","Os02g0178100","Os02g0781400","Os02g0781400",7.6499324,8.439939,null,"Os09g0246300",7.772692,"Os10g0344500",-2.7708168,{"$nulls":5},"Os03g0112900",0,1.2192672,{"$nulls":5},"Os02g0673700",1.456047,-1.2354975,null,"Os05g0555600",3.5486362,-2.5385206,null,"Os05g0455200",4.5274816,1.769432,{"$nulls":5},"NAL4","nal4(nal), nal4, nal, cul4","NARROW LEAF 4","narrow leaf4, narrow leaf 4, narrow leaf-4, curl leaf-4",4," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000370 - leaf width, TO:0000492 - leaf shape","PO:0009025 - vascular leaf ",null,null,"LOC_Os05g02730.1","Os06g0572400","Os08g0562500","Os01g0177900",0,3.2658243,null,"TIFY11D","OsTIFY11d, OsJAZ1, JAZ1, OsJAZ 12, OsJAZ12, JAZ12","TIFY GENE 11D","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0042594 - response to starvation, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000011 - nitrogen sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000276 - drought tolerance",null,"Os10g0392400","LOC_Os10g25290.1","Os10g0573900","Os03g0172100","Os03g0198600",0,1.6825858,null,"GLU4","Glu4*, Glu4, OsGLU4","GLUTELIN 4","Rice glutelin4, Rice glutelin-4, glutelin-4",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os03g0129300","Os03g0129300","Os03g0401300",4.925789,2.328625,null,"GLH5","Glh5","GREEN LEAFHOPPER RESISTANCE 5","Green leafhopper resistance5, Green leafhopper resistance 5, Green leafhopper resistance-5",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os06g0275000","Os08g0460000","Os04g0457000",0,5.0769076,null,"MOC1","moc1, OsMOC1, OsGRAS-33, OsGRAS33, GRAS-33, GRAS33","MONOCULM 1","monoculm1, Monoculm 1, Protein MONOCULM 1, GRAS protein 33",6," Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009739 - response to gibberellin stimulus, GO:0045449 - regulation of transcription, GO:0010075 - regulation of meristem growth, GO:0009737 - response to abscisic acid stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0030528 - transcription regulator activity, GO:0010229 - inflorescence development, GO:0010014 - meristem initiation, GO:0006350 - transcription, GO:0048364 - root development","TO:0000166 - gibberellic acid sensitivity, TO:0000547 - primary branch number, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000656 - root development trait, TO:0000501 - spikelet weight, TO:0000207 - plant height","PO:0008039 - stem base , PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0000232 - axillary bud meristem , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006343 - axillary shoot system ","Os06g0610300","LOC_Os06g40780.1","Os06g0275000","Os06g0275000","Os04g0645100",2.4114904,2.1670105,null,null,"Os03g0123300","Os10g0562700",1.1526028,0]
[null,null,"Os07g0678600",null,"Os03g0819900",null,"Os10g0491000","LOC_Os10g34930",-1.8751928,"Os02g0247100","LOC_Os02g14910","bZIP",4.0527945,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os02g0280700","Transcript","moderately similar to ( 286) AT5G20400 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr5:6894871-6896185 FORWARDweakly similar to ( 172) LDOX_MALDO Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",3.7561703,{"$nulls":3},"Os01g0860800","Os08g0126300","Os09g0459900","Os09g0459900",7.307221,6.248041,null,"Os06g0643500",7.729252,"Os07g0112700",-2.7452755,{"$nulls":5},"Os01g0919800",-4.09928,-2.1748767,{"$nulls":5},"Os04g0573900",-1.9732274,-1.538496,null,"Os02g0782500",0,-2.0676515,null,"Os03g0856700",1.9106296,1.865975,{"$nulls":5},"LG","lg","LIGULELESS","liguleless",4," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000024 - ligule length, TO:0000335 - ligule shape","PO:0009025 - vascular leaf , PO:0020105 - ligule ",null,null,"LOC_Os05g26890.1","Os03g0769100","Os03g0633800","Os05g0563000",4.3473687,3.2179844,null,"TIFY11C","OsJAZ2, JAZ2, OsJAZ 11, OsJAZ11, Os-JAZ11, JAZ11, OsTIFY11c. OsJAZ1, JAZ1","TIFY GENE 11C","Jasmonate ZIM-domain protein 2, Jasmonate ZIM-domain protein 11",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0016036 - cellular response to phosphate starvation, GO:0055062 - phosphate ion homeostasis, GO:0010966 - regulation of phosphate transport, GO:0031347 - regulation of defense response, GO:0042594 - response to starvation, GO:0080022 - primary root development, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000148 - viral disease resistance, TO:0000207 - plant height, TO:0000180 - spikelet fertility",null,"Os03g0180900","LOC_Os03g08320.1","Os03g0643300","Os05g0387700","Os03g0786400",0,1.5608987,null,"GLU5","Glu5*, Glu5, OsGLU5","GLUTELIN 5","Rice glutelin5, Rice glutelin 5, Rice glutelin-5, glutelin-5",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os08g0345800","Os08g0345800","Os01g0823500",0,2.3226073,null,"GLH7","Glh7","GREEN LEAFHOPPER RESISTANCE 7","Green leafhopper resistance7, Green leafhopper resistance 7, Green leafhopper resistance-7",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os09g0133600","Os05g0550300","Os04g0640700",0,4.935722,null,"qDTM-4-2(t) (dtm4.1)","qDTM-4-2(t) (dtm4.1)","days to maturity (QTL)-4-2(t)","days to maturity (QTL)-4-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os09g0133600","Os09g0133600","Os12g0263000",2.0778656,2.1643085,null,null,"Os11g0490600","Os05g0530500",1.0487126,0]
[null,null,"Os10g0157400",null,"Os06g0551400",null,"Os01g0246700","LOC_Os01g14440",-1.8576914,"Os04g0495500","LOC_Os04g41820","bZIP",1.9407967,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os08g0390200","Transcript","moderately similar to ( 283) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 240) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",4.8504515,{"$nulls":3},"Os04g0412300","Os02g0558700","Os11g0302800","Os11g0302800",6.3742046,3.6845944,null,"Os10g0437500",7.707684,"Os10g0573900",-2.732528,{"$nulls":5},"Os10g0580400",-2.7884464,-2.238878,{"$nulls":5},"Os01g0685400",1.7438254,-1.3034965,null,"Os12g0210400",0,-1.025217,null,"Os03g0401300",4.925789,2.328625,{"$nulls":5},"GL1","gl1, NUDA/GL-1, NUDA/GL1, NUDA, GL-1, OsWOX3B, OsWOX2, OsWOX3, Os WOX3, WOX3B, WOX2, WOX3, LSY1, OsLSY1, DEP, OsDEP","GLABROUS LEAF AND HULL 1","glabrous leaf and hull1, glabrous leaf and hull 1, glabrous leaf and hull-1, WUSCHEL-related homeobox 3B, leaf lateral symmetry-1, LEAF LATERAL SYMMETRY1, DEPILOUS",5," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009955 - adaxial/abaxial pattern formation, GO:0007275 - multicellular organismal development, GO:0003700 - transcription factor activity, GO:0000079 - regulation of cyclin-dependent protein kinase activity, GO:0048366 - leaf development, GO:0030154 - cell differentiation, GO:0043565 - sequence-specific DNA binding, GO:0010090 - trichome morphogenesis, GO:0006351 - transcription, DNA-dependent","TO:0000417 - lemma and palea pubescence,  - palea pubescence, TO:0000655 - leaf development trait, TO:0000358 - female sterility, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000055 - leaf lamina pubescence","PO:0001050 - leaf development stage , PO:0009025 - vascular leaf , PO:0009062 - gynoecium , PO:0009037 - lemma , PO:0009038 - palea , PO:0020039 - leaf lamina ","Os05g0118700","LOC_Os05g02730.1",null,"Os02g0810200","Os03g0346200","Os03g0563300",2.476731,3.0603971,null,"TIFY11A","OsJAZ3, JAZ3, OsJAZ 9, OsJAZ9, Os-JAZ9, JAZ9, OsTIFY11a, OsJAZ6, JAZ6","TIFY GENE 11A","Jasmonate ZIM-domain protein 3, Jasmonate ZIM-domain protein 9",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000397 - grain size",null,"Os03g0180800","LOC_Os03g08310.1","Os01g0224700","Os07g0605200","Os02g0750400",0,1.5473924,null,"GLU6","Glu6*(GluA4), Glu6, GluA4, GluA-4","GLUTELIN 6","Rice glutelin6, Rice glutelin 6, Rice glutelin-6",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os04g0685900","Os04g0685900","Os01g0524500",0,2.2737515,null,"GLUA3","Glua3*, GLUA-3, GT22, GT3, Glu21, GluA-3, OsEnS-47, EnS-47, GLU3","GLUTELIN SUBFAMILY A3 FROM WILD RICE SPECIES","Glutelin subfamily A3 from wild rice species, Glutelin type-A 3 precursor, Glutelin type-A 3, Glutelin type-A 3 acidic chain, Glutelin type-A 3 basic chain, Rice glutelin-21, glutelin-21, endosperm-specific gene 47, glutelin 3",3," Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0009651 - response to salt stress, GO:0009415 - response to water, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination","TO:0000615 - abscisic acid sensitivity, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000490 - protein composition related trait","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os03g0427300","LOC_Os03g31360.1","Os03g0146400","Os02g0197600","Os12g0274700",0,4.865291,null,"qDTM-7-1(t) (dtm4.1)","qDTM-7-1(t) (dtm4.1)","days to maturity (QTL)-7-1(t)","days to maturity (QTL)-7-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0146400","Os03g0146400","Os05g0103200",2.04943,2.154865,null,null,"Os07g0186000","Os09g0114500",1.0101665,0]
[null,null,"Os10g0564500",null,"Os06g0622800",null,"Os05g0460000","LOC_Os05g38530",-1.8242869,"Os06g0662200","LOC_Os06g45140","bZIP",1.2566763,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0690500","Transcript","moderately similar to ( 250) AT1G06650 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:2035909-2037186 FORWARDmoderately similar to ( 226) DV4H_CATRO Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed",-1.3304685,{"$nulls":3},"Os05g0375400","Os11g0629500","Os03g0304800","Os03g0304800",5.959131,4.6029663,null,"Os05g0189900",7.6789317,"Os03g0580200",-2.73143,{"$nulls":5},"Os11g0490900",-1.6612319,-2.0225337,{"$nulls":5},"Os08g0473900",3.8398027,3.305474,null,"Os07g0239400",-1.6668768,-1.0277327,null,"Os05g0103200",2.04943,2.154865,{"$nulls":5},"D1","d1, GPA1, GA1, OsGA1, RGA1, dwf1, XA7, RGA, D1/RGA1, D89","DAIKOKU DWARF","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009725 - response to hormone stimulus, GO:0005525 - GTP binding, GO:0004871 - signal transducer activity, GO:0003924 - GTPase activity, GO:0009408 - response to heat, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0006952 - defense response, GO:0006471 - protein amino acid ADP-ribosylation, GO:0005834 - heterotrimeric G-protein complex, GO:0010038 - response to metal ion, GO:0009755 - hormone-mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007275 - multicellular organismal development, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling","TO:0000166 - gibberellic acid sensitivity, TO:0000080 - micronutrient sensitivity, TO:0000207 - plant height, TO:0000132 - basal internode diameter, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000299 - leaf lamina color, TO:0000303 - cold tolerance, TO:0000089 - panicle type, TO:0000734 - grain length, TO:0000326 - leaf color, TO:0002730 - grain shape, TO:0000615 - abscisic acid sensitivity, TO:0000576 - stem length, TO:0000158 - red light sensitivity, TO:0000040 - panicle length, TO:0000391 - seed size, TO:0000135 - leaf length, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000484 - seed shape, TO:0000259 - heat tolerance, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000455 - seed set percent, TO:0000397 - grain size","PO:0009049 - inflorescence , PO:0020039 - leaf lamina , PO:0020142 - stem internode , PO:0000003 - whole plant , PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os05g0333200","LOC_Os05g26890.1","LOC_Os06g40080.1","Os03g0123300","Os05g0386800","Os10g0371000",0,3.015258,null,"TIFY11B","OsJAZ4, JAZ4, OsJAZ 10, OsJAZ10, JAZ10, OsTIFY11b","TIFY GENE 11B","Jasmonate ZIM-domain protein 4, Jasmonate ZIM-domain protein 10",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009409 - response to cold, GO:0005634 - nucleus","TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000180 - spikelet fertility, TO:0000303 - cold tolerance, TO:0002757 - flag leaf length, TO:0000172 - jasmonic acid sensitivity",null,"Os03g0181100","LOC_Os03g08330.1","Os01g0174000","Os02g0811000","Os07g0102200",0,1.5238723,null,"GLU7","Glu7*(GluB2), Glu7, GluB2, GLUB2, GLUB-2, GluB-2, GluB-7, GLUB7","GLUTELIN 7","Rice glutelin7, Rice glutelin-7, Glutelin type-B 2 precursor, Glutelin type-B 2, Glutelin type-B 7, Glutelin type-B 2 acidic chain, Glutelin type-B 2 basic chain",2," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ","Os02g0249600","LOC_Os02g15150.1, LOC_Os02g15150.2","Os02g0198300","Os02g0198300","Os03g0735000",2.4854543,2.2307365,null,"GM1","Gm1, Gm-1, GM-1","GALL MIDGE RESISTANCE 1","Gall midge resistance1, Gall midge resistance 1, Gall midge resistance-1",9," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os10g0562100","Os02g0802500","Os08g0189300",2.5801365,4.864809,null,"qDTM-8-1(t) (dtm4.1)","qDTM-8-1(t) (dtm4.1)","days to maturity (QTL)-8-1(t)","days to maturity (QTL)-8-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os10g0562100","Os10g0562100","Os10g0567400",0,2.1365983,null,null,"Os12g0548300","Os08g0407200",-1.1862564,0]
[null,null,"Os11g0113700",null,"Os03g0823700",null,"Os03g0341000","LOC_Os03g22170",-1.8170595,"Os08g0176900","LOC_Os08g07970","bZIP",-1.2607719,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os01g0352100","Transcript","moderately similar to ( 291) AT1G17010 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:5817667-5819183 FORWARDweakly similar to ( 178) FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) PcbC 2OG-FeII_Oxy protein|flavonol synthase/flavanone 3-hydroxylase, putative, expressed",3.340451,{"$nulls":3},"Os10g0515200","Os01g0955500","Os06g0483200","Os06g0483200",5.8922486,4.0655737,null,"Os02g0781400",7.6499324,"Os03g0201000",-2.7257602,{"$nulls":5},"Os07g0209000",-1.8521515,-1.5298886,{"$nulls":5},"Os11g0525600",1.4500412,2.0368564,null,"Os01g0675800",-2.1810002,-1.7036854,null,"Os01g0633100",1.5410696,1.1146822,{"$nulls":5},"DRP6","drp6","DRIPPING-WET LEAF 6","dripping-wet leaf6, dripping-wet leaf 6, dripping-wet leaf-6",6," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",{"$nulls":3},"Os05g0227600","Os06g0232300","Os07g0191600",0,2.9421368,null,"TIFY10A","OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A","TIFY GENE 10A","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0031347 - regulation of defense response, GO:0005634 - nucleus, GO:0051607 - defense response to virus, GO:0009611 - response to wounding","TO:0002736 - flower number, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0002759 - grain number",null,"Os03g0402800","LOC_Os03g28940.2, LOC_Os03g28940.1","Os08g0189900","Os09g0459200","Os01g0174000",0,1.4943272,null,"GLUA1","Glua1*, Glua1, GLUA-1, GluA-1, GluA1, Glu19, OsEnS-16","GLUTELIN SUBFAMILY A1 FROM WILD RICE SPECIES","Glutelin subfamily A1 from wild rice species, Glutelin subfamily A-1 from wild rice species, Glutelin type-A 1 precursor, Glutelin type-A 1, Glutelin type I, Glutelin type-A 1 acidic chain, Glutelin type-A 1 basic chain, Rice glutelin-19, glutelin-19, endosperm-specific gene 16",1," Seed - Physiological traits - Storage substances","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ","Os01g0762500","LOC_Os01g55690.1","Os05g0103200","Os05g0103200","Os01g0680200",0,2.1909852,null,"GM3","gm3*, gm3","GALL MIDGE RESISTANCE 3","gall midge resistance3, gall midge resistance 3, gall midge resistance-3",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0675800","Os03g0412300","Os08g0512600",3.8642178,4.8130536,null,"qGPP-1-2(t) (gpp1.1)","qGPP-1-2(t) (gpp1.1)","grains per panicle (QTL)-1-1(t)","grains per panicle (QTL)-1-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0675800","Os01g0675800","Os04g0469800",0,2.068486,null,null,"Os02g0154200","Os08g0537800",-1.2991232,0]
[null,null,"Os12g0113500",null,"Os11g0153400",null,"Os12g0134300","LOC_Os12g04060",-1.8095843,"Os09g0489500","LOC_Os09g31390","bZIP",-2.236131,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os03g0439500","Transcript","moderately similar to ( 234) AT1G17020 | Symbols: SRG1, ATSRG1 | SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | chr1:5820258-5821741 FORWARDweakly similar to ( 160) FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) PcbC 2OG-FeII_Oxy protein|leucoanthocyanidin dioxygenase, putative, expressed",1.6984366,{"$nulls":3},"Os05g0424300","Os01g0652600","Os05g0450300","Os05g0450300",5.73869,-1.4306365,null,"Os04g0554800",7.6038456,"Os12g0172400",-2.7002013,{"$nulls":5},"Os05g0555600",3.5486362,-2.5385206,{"$nulls":5},"Os08g0531000",2.6291068,4.5972238,null,"Os06g0659100",0,-1.209332,null,"Os01g0866400",-3.1494305,2.356459,{"$nulls":5},"SE5","Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, YGL2, YGL2/HO1","PHOTOSENSITIVITY 5","Photosensitivity5, Photosensitivity 5, Photoperiod-sensitivity-5, heme oxygenase 1, heme oxygenase-1, haem oxygenase-1, photoperiod sensitivity5, PHOTOPERIOD SENSITIVITY 5, YELLOW-GREEN LEAF2, YELLOW GREEN LEAF 2",6," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0003700 - transcription factor activity, GO:0010024 - phytochromobilin biosynthetic process, GO:0009409 - response to cold, GO:0060359 - response to ammonium ion, GO:0006979 - response to oxidative stress, GO:0006788 - heme oxidation, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0009658 - chloroplast organization, GO:0010229 - inflorescence development, GO:0010019 - chloroplast-nucleus signaling pathway, GO:0009585 - red, far-red light phototransduction, GO:0009507 - chloroplast, GO:0048573 - photoperiodism, flowering, GO:0004392 - heme oxygenase (decyclizing) activity, GO:0009648 - photoperiodism, GO:0015979 - photosynthesis, GO:0009536 - plastid, GO:0010075 - regulation of meristem growth","TO:0000429 - salt sensitivity, TO:0000229 - photoperiod sensitivity, TO:0000137 - days to heading, TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000298 - chlorophyll ratio, TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0002715 - chloroplast development trait, TO:0002616 - flowering time, TO:0000303 - cold tolerance, TO:0000469 - days to maturity","PO:0020033 - coleoptile , PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009013 - portion of meristem tissue , PO:0009049 - inflorescence , PO:0020148 - shoot apical meristem , PO:0020103 - flag leaf , PO:0025034 - leaf ","Os06g0603000","LOC_Os06g40080.1",null,"Os03g0131900","Os06g0205100","Os08g0556900",0,2.91878,null,"TIFY10B","OsJAZ6, OsJAZ 7, OsJAZ7, OsTIFY10B, JAZ6, JAZ7","TIFY GENE 10B","Jasmonate ZIM-domain protein 6, Jasmonate ZIM-domain protein 7.",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus","TO:0000576 - stem length, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0002759 - grain number, TO:0002736 - flower number, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0615200","LOC_Os07g42370.3, LOC_Os07g42370.2, LOC_Os07g42370.1","Os03g0198600","Os09g0543100","Os07g0549600",0,1.4914767,null,"GLUA2","Glua2*, Glua2, GLUA-2, GluA-2, Glu20, GluA2, OsEnS-137","GLUTELIN SUBFAMILY A2 FROM WILD RICE SPECIES","Glutelin subfamily A2 from wild rice species, Glutelin type-A 2 precursor, Glutelin type-A 2, Glutelin type II, Glutelin type-A 2 acidic chain, Glutelin type-A 2 basic chain, Glutelin subfamily A-2 from wild rice species, Rice glutelin-20, glutelin-20, endosperm-specific gene 137",10," Seed - Physiological traits - Storage substances","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait, TO:0000598 - protein content, TO:0000162 - seed quality","PO:0009010 - seed , PO:0009089 - endosperm , PO:0006220 - central endosperm ","Os10g0400200","LOC_Os10g26060.1","Os03g0856700","Os03g0856700","Os01g0878700",0,2.1816192,null,"GM4","Gm4(t)*, Gm4(t), Gm4, Gm4t","GALL MIDGE RESISTANCE 4","Gall midge resistance4(t), Gall midge resistance4, Gall midge resistance 4, Gall midge resistance-4",8," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os10g0580400","Os07g0586200","Os08g0380100",7.3613625,4.7776775,null,"qGPP-1-2(t) (gpp11.1)","qGPP-1-2(t) (gpp11.1)","grains per panicle (QTL)-11-1(t)","grains per panicle (QTL)-11-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os10g0580400","Os10g0580400","Os05g0389000",3.2207673,2.0078347,null,null,"Os01g0118300","Os06g0706400",-1.3119088,0]
[null,null,"Os01g0696000",null,"Os05g0567300",null,"Os04g0600300","LOC_Os04g51160",-1.8078017,"Os10g0531900","LOC_Os10g38820","bZIP",3.415385,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0451000","Transcript","moderately similar to ( 400) AT1G05010 | Symbols: EFE, ACO4, EAT1 | EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | chr1:1431419-1432695 REVERSEhighly similar to ( 568) ACCO1_ORYSA 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed",2.1812222,{"$nulls":3},"Os04g0573900","Os03g0314400","Os07g0189700","Os07g0189700",5.2034497,3.8183568,null,"Os06g0653000",7.6015506,"Os02g0166200",-2.697586,{"$nulls":5},"Os04g0556500",-1.6177063,-1.454739,{"$nulls":5},"Os08g0460000",4.8411865,7.935741,null,"Os02g0504000",0,-1.5094649,{"$nulls":9},"ZN","zn","ZEBRA NECROSIS","zebra necrosis",6," Vegetative organ - Leaf","GO:0015995 - chlorophyll biosynthetic process","TO:0000070 - variegated leaf necrosis, TO:0000495 - chlorophyll content, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",{"$nulls":3},"Os03g0685000","Os11g0143200","Os10g0573000",0,2.759031,null,"TIFY10C","OsJAZ7, JAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8","TIFY GENE 10C","Jasmonate ZIM-domain protein 7, Jasmonate ZIM-domain protein 8.",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0005829 - cytosol, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002736 - flower number, TO:0002759 - grain number, TO:0000172 - jasmonic acid sensitivity, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ","Os09g0439200","LOC_Os09g26780.1","Os06g0237502","Os05g0563400","Os06g0712700",0,1.468964,null,"GLUA3","Glua3*, GLUA-3, GT22, GT3, Glu21, GluA-3, OsEnS-47, EnS-47, GLU3","GLUTELIN SUBFAMILY A3 FROM WILD RICE SPECIES","Glutelin subfamily A3 from wild rice species, Glutelin type-A 3 precursor, Glutelin type-A 3, Glutelin type-A 3 acidic chain, Glutelin type-A 3 basic chain, Rice glutelin-21, glutelin-21, endosperm-specific gene 47, glutelin 3",3," Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0009651 - response to salt stress, GO:0009415 - response to water, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination","TO:0000615 - abscisic acid sensitivity, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000490 - protein composition related trait","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os03g0427300","LOC_Os03g31360.1","Os10g0564500","Os10g0564500","Os04g0645100",2.4114904,2.1670105,null,"GRH2","Grh2","GREEN RICE LEAFHOPPER RESISTANCE 2","Green rice leafhopper resistance2",11," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance",{"$nulls":3},"Os03g0643300","Os10g0539600","Os10g0516100",0,4.7640057,null,"qGPP-1-2(t) (gpp12.1)","qGPP-1-2(t) (gpp12.1)","grains per panicle (QTL)-12-1(t)","grains per panicle (QTL)-12-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0643300","Os03g0643300","Os02g0174100",0,1.9949021,null,null,"Os05g0438600","Os02g0819100",-1.3327707,0]
[null,null,"Os02g0208900",null,"Os05g0454200",null,"Os01g0952800","LOC_Os01g72370",-1.7507919,"Os12g0233800","LOC_Os12g13170","bZIP",-1.4053911,null,"17.5.1","hormone metabolism.ethylene.synthesis-degradation","Os09g0248900","Transcript","moderately similar to ( 249) AT5G41980 | Symbols: | unknown protein | chr5:16793765-16794889 FORWARD protein|retrotransposon protein, putative, unclassified, expressed",6.0013676,{"$nulls":3},"Os02g0185300","Os01g0528300","Os07g0510400","Os07g0510400",5.149489,6.042833,null,"Os03g0293600",7.5651565,"Os01g0949700",-2.6883936,{"$nulls":5},"Os06g0275000",-1.3490849,-1.0695515,{"$nulls":5},"Os05g0455200",4.5274816,1.769432,null,"Os03g0818800",0,-1.0689335,{"$nulls":9},"C","C, Cp, OsC1, Os-C1, C1, OsMyb6, Myb6, OsPL6, PL6, OsGL1E, GL1E","CHROMOGEN FOR ANTHOCYANIN","Chromogen for anthocyanin, Chromogen, Rice C1 anthocyanin regulatory gene, myb transcription factor 6, transcription factor MYB6, Oryza saliva C1, rice homolog of maize C1, Purple Leaf 6. GLABRA1E, GLABRA 1E",6," Vegetative organ - Leaf,  Reproductive organ - Inflorescence,  Coloration - Anthocyanin,  Coloration - Chlorophyll,  Seed - Morphological traits,  Other","GO:0015994 - chlorophyll metabolic process, GO:0005634 - nucleus, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009812 - flavonoid metabolic process, GO:0003677 - DNA binding, GO:0009718 - anthocyanin biosynthetic process, GO:0006979 - response to oxidative stress","TO:0000316 - photosynthetic ability, TO:0000426 - internode color, TO:0000190 - seed coat color, TO:0000340 - total soluble sugar content, TO:0000140 - apiculus color, TO:0000290 - flavonoid content, TO:0000364 - leaf collar color, TO:0000605 - hydrogen peroxide content, TO:0000264 - lemma and palea color, TO:0002675 - gibberellic acid content, TO:0000326 - leaf color, TO:0000071 - anthocyanin content, TO:0001018 - transpiration rate, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate, TO:0000400 - sterile lemma color, TO:0002715 - chloroplast development trait, TO:0000258 - leaf thickness, TO:0002660 - cytokinin content, TO:0000295 - chlorophyll-b content, TO:0002667 - abscisic acid content, TO:0002657 - oxidative stress, TO:0000141 - awn color, TO:0000185 - stigma color, TO:0000495 - chlorophyll content, TO:0000367 - basal leaf sheath color, TO:0000293 - chlorophyll-a content","PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009073 - stigma , PO:0025349 - awn , PO:0009037 - lemma , PO:0006033 - paleal apiculus , PO:0005005 - shoot internode , PO:0009025 - vascular leaf , PO:0009010 - seed , PO:0006012 - leaf collar , PO:0006032 - lemma awn , PO:0009038 - palea , PO:0020104 - leaf sheath , PO:0007632 - seed maturation stage ","Os06g0205100","LOC_Os06g10350.1",null,"Os03g0563300","Os05g0589700","Os05g0382600",1.9584646,2.7545216,null,"EG2","OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, JAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2","EXTRA GLUME 2","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 10, extra glume 2, TIFY gene 3",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0048449 - floral organ formation, GO:0010582 - floral meristem determinacy, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0009651 - response to salt stress","TO:0000657 - spikelet anatomy and morphology trait, TO:0000172 - jasmonic acid sensitivity, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000276 - drought tolerance, TO:0000590 - grain weight, TO:0000227 - root length, TO:0000615 - abscisic acid sensitivity, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os04g0653000","LOC_Os04g55920.5, LOC_Os04g55920.1, LOC_Os04g55920.2","Os01g0140100","Os02g0188500","Os09g0442100",2.6503267,1.4673223,null,"GT","Gt(t)*, Gt","HIGH GELATINIZATION TEMPERATURE","High gelatinization temperature",null," Seed - Physiological traits - Taste","GO:0016051 - carbohydrate biosynthetic process","TO:0000462 - gelatinization temperature","PO:0009089 - endosperm ",null,null,"Os01g0231000","Os01g0231000","Os05g0103200",2.04943,2.154865,null,"GRH3","Grh3*, Grh3, Grh3(t)","GREEN RICE LEAFHOPPER RESISTANCE 3","Green rice leafhopper resistance3, Green rice leafhopper resistance 3, Green rice leafhopper resistance-3",6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0866400","Os03g0819600","Os02g0697400",0,4.7170224,null,"qGPP-1-2(t) (gpp12.2)","qGPP-1-2(t) (gpp12.2)","grains per panicle (QTL)-12-2(t)","grains per panicle (QTL)-12-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0866400","Os01g0866400","Os05g0481000",1.526935,1.9932986,null,null,"Os08g0224300","Os01g0350900",-1.3581586,0]
[null,null,"Os02g0729400",null,"Os01g0621300",null,"Os10g0562100","LOC_Os10g41260",-1.7148021,"Os01g0195000","LOC_Os01g09850","C2H2",-0.9494095,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os07g0227600","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.3763108,{"$nulls":3},"Os02g0817900","Os04g0370900","Os02g0192700","Os02g0192700",5.063101,7.461029,null,"Os03g0439500",7.52218,"Os03g0673400",-2.6869125,{"$nulls":5},"Os03g0266200",-1.7446078,-1.1778779,{"$nulls":5},"Os08g0345800",2.1964571,2.5752084,null,"Os06g0133000",-1.9926609,-2.2645013,{"$nulls":9},"HLA","Hla, Hl1","HAIRY LEAF-A","Hairy leaf-a, Hairy leaf-1",6," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000055 - leaf lamina pubescence","PO:0020039 - leaf lamina ",null,null,"LOC_Os07g31450.1","Os03g0712800","Os08g0442700","Os05g0139100",0,2.685197,null,"TIFY9","OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ11/TIFY9","TIFY GENE 9","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000172 - jasmonic acid sensitivity, TO:0000207 - plant height, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000148 - viral disease resistance",null,"Os04g0395800","LOC_Os04g32480.1","Os12g0552300","Os02g0743400","Os02g0594800",0,1.3745664,null,"H(T)*","H(t)*, Hcr","HARDNESS OF COOKED RICE","Hardness of cooked rice",null," Seed - Physiological traits - Taste","GO:0016051 - carbohydrate biosynthetic process","TO:0000489 - carbohydrate composition related trait, TO:0000587 - endosperm quality","PO:0009089 - endosperm ",null,null,"Os01g0685400","Os01g0685400","Os10g0567400",0,2.1365983,null,"GSV","Gsv(Gs), Gs, Gsv","GRASSY STUNT RESISTANCE","Grassy stunt resistance",null," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000127 - rice grassy stunt virus-1 resistance","PO:0009006 - shoot system ",null,null,"Os03g0764900","Os04g0233400","Os07g0558400",0,4.7045493,null,"qGPP-1-2(t) (gpp2.1)","qGPP-1-2(t) (gpp2.1)","grains per panicle (QTL)-2-1(t)","grains per panicle (QTL)-2-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0764900","Os03g0764900","Os02g0198300",2.1420994,1.8940853,null,null,"Os09g0422500","Os05g0150500",-1.4351007,0]
[null,null,"Os03g0673800",null,"Os12g0533400",null,"Os01g0675800","LOC_Os01g48446",-1.7036854,"Os01g0778100","LOC_Os01g57020","C2H2",-1.671371,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os10g0450000","Transcript","weakly similar to ( 114) AT3G50150 | Symbols: | unknown protein | chr3:18595809-18597551 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",4.2582054,{"$nulls":3},"Os05g0101600","Os01g0739700","Os07g0287400","Os07g0287400",5.040909,5.622683,null,"Os11g0448700",7.508835,"osa-miR169f",-2.659211,{"$nulls":5},"Os03g0764900",-3.6407013,-2.1698039,{"$nulls":5},"Os03g0856700",1.9106296,1.865975,null,"Os05g0530400",0,-1.9081851,{"$nulls":9},"RL6","rl6(t), cul13","ROLLED LEAF 6","rolled leaf6, rolled leaf 6, rolled leaf-6, curl leaf-13",7," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000492 - leaf shape, TO:0000085 - leaf rolling, TO:0000370 - leaf width","PO:0009025 - vascular leaf ",{"$nulls":3},"Os05g0349700","Os02g0450000","Os03g0416200",3.9503605,2.6448455,null,"ERF101","OsERF#101, OsERF101, OsDERF6, DERF6, AP2/EREBP#089, AP2/EREBP89, OsRap2.6, Rap2.6, ERF113, OsERF113","ETHYLENE RESPONSE FACTOR 101","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 101, drought-responsive ethylene response factor 6, drought-responsive ERF 6, ethylene response factor 101, APETALA2/ethylene-responsive element binding protein 89",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009646 - response to absence of light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0048653 - anther development, GO:0009651 - response to salt stress","TO:0000615 - abscisic acid sensitivity, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000396 - grain yield, TO:0000625 - spikelet density, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000227 - root length, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000276 - drought tolerance, TO:0006002 - proline content, TO:0000449 - grain yield per plant, TO:0000172 - jasmonic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0001083 - inflorescence development stage , PO:0009046 - flower , PO:0025313 - tapetum , PO:0020048 - microspore , PO:0001004 - anther development stage ","Os04g0398000","LOC_Os04g32620.1","Os02g0750400","Os06g0136900","Os01g0206700",0,1.3550063,null,"KR1","Kr1*, Kr1","SHORT GRAIN","Short grain",null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length, TO:0000391 - seed size","PO:0009010 - seed ",null,null,"Os07g0461600","Os07g0461600","Os10g0437600",1.5073477,2.085221,null,"HE","He","HELMINTHOSPORIUM ORYZAE RESISTANCE","Helminthosporium oryzae resistance",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000323 - stem rot disease resistance, TO:0000356 - brown spot disease resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os04g0271700","Os03g0341000","Os02g0657000",3.3227575,4.613399,null,"qGPP-1-2(t) (gpp2.2)","qGPP-1-2(t) (gpp2.2)","grains per panicle (QTL)-2-2(t)","grains per panicle (QTL)-2-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os04g0469800","Os04g0271700","Os02g0152900",0,1.8932557,{"$nulls":3},"Os06g0658900",-1.5231868,0]
[null,null,"Os05g0382600",null,"Os03g0781000",null,"Os03g0183200","LOC_Os03g08490",-1.6938057,"Os01g0871200","LOC_Os01g65080","C2H2",-1.065425,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0163200","Transcript","weakly similar to ( 105) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1524832,{"$nulls":3},"Os11g0119700","Os01g0919800","Os02g0702600","Os02g0702600",4.939876,4.0011487,null,"Os04g0629700",7.438141,"Os01g0944900",-2.6030276,{"$nulls":5},"Os01g0195000",-0.9520299,-0.9494095,{"$nulls":5},"Os10g0437600",1.5073477,2.085221,null,"Os01g0733200",-1.8073872,-1.5364038,{"$nulls":9},"RFS","rfs, cul7, OsRFS, OsCHR729, CHR729, CHR4, OsCHR4, CRL6, OsCRL, OsCHR4/CHR729, PKR1, OsPHD32, PHD32","ROLLED FINE STRIPED LEAF","rolled fine striped leaf, curl leaf-7, Rolled Fine Striped, CHD-related gene 729, Chromatin Remodeling 4, crown rootless6, crown rootless 6, PICKLE RELATED1, Plant homeo-domain finger protein 32, PHD finger protein 32",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0016571 - histone methylation, GO:0048366 - leaf development, GO:0040029 - regulation of gene expression, epigenetic, GO:0009555 - pollen development, GO:0048364 - root development, GO:0016570 - histone modification, GO:0015995 - chlorophyll biosynthetic process, GO:0007275 - multicellular organismal development, GO:0005524 - ATP binding, GO:0044030 - regulation of DNA methylation, GO:0010025 - wax biosynthetic process, GO:0009658 - chloroplast organization, GO:0008270 - zinc ion binding, GO:0004386 - helicase activity, GO:0003677 - DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0007623 - circadian rhythm","TO:0000605 - hydrogen peroxide content, TO:0000069 - variegated leaf, TO:0000085 - leaf rolling, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000590 - grain weight, TO:0000449 - grain yield per plant, TO:0002759 - grain number, TO:0002616 - flowering time, TO:0000547 - primary branch number, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000656 - root development trait, TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000207 - plant height, TO:0000420 - fertility related trait, TO:0000326 - leaf color, TO:0000040 - panicle length, TO:0000370 - leaf width, TO:0000492 - leaf shape","PO:0005020 - vascular bundle , PO:0004006 - mesophyll cell , PO:0009025 - vascular leaf , PO:0001050 - leaf development stage , PO:0001007 - pollen development stage , PO:0007520 - root development stage , PO:0025424 - vascular tissue development stage , PO:0009015 - portion of vascular tissue ","Os07g0497100","LOC_Os07g31450.1","LOC_Os11g01130.2, LOC_Os11g01130.1","Os11g0544800","Os01g0659900","Os06g0693200",0,2.631947,null,"NRFG3","OsENODL17, ENODL17, OsNRFG3","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 3","early nodulin-like protein 17, neo-tetraploid rice fertility related gene 3",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009055 - electron carrier activity, GO:0005507 - copper ion binding, GO:0046658 - anchored to plasma membrane","TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0009066 - anther , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os06g0553800","LOC_Os06g36010.1","Os10g0573000","Os08g0441500","Os04g0477500",0,1.3472666,null,"KR2","Kr2*, Kr2","LONG GRAIN","Long grain",null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length, TO:0000391 - seed size","PO:0009010 - seed ",null,null,"Os01g0633100","Os01g0633100","Os04g0685900",2.1874247,2.0713534,null,"HPR1","hpr1","HYDROXYPROLINE RESISTANCE1","hydroxyproline resistance1, hydroxyproline resistance 1, hydroxyproline resistance-1",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000482 - chemical stress sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os06g0677000","Os05g0554000","Os03g0819600",4.391084,4.5862184,null,"qGPP-1-2(t) (gpp3.1)","qGPP-1-2(t) (gpp3.1)","grains per panicle (QTL)-3-1(t)","grains per panicle (QTL)-3-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os08g0174500","Os06g0677000","Os03g0856700",1.9106296,1.865975,{"$nulls":3},"Os03g0325600",-2.0727797,0]
[null,null,"Os07g0670300",{"$nulls":3},"Os01g0778100","LOC_Os01g57020",-1.671371,"Os02g0572900","LOC_Os02g36360","C2H2",-1.0505309,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0183200","Transcript","AP2 AP2 protein|AP2 domain containing protein, expressed",-1.6938057,{"$nulls":3},"Os12g0119000","Os03g0796800","Os11g0683500","Os11g0683500",4.9107556,3.5710804,null,"Os01g0106300",7.4042296,"Os09g0400400",-2.5996892,{"$nulls":5},"Os03g0146400",-2.0158217,-1.6110601,{"$nulls":5},"Os03g0401300",4.925789,2.328625,null,"Os10g0567000",-2.5941348,-1.4640685,{"$nulls":9},"DRP2","drp2","DRIPPING-WET LEAF 2","dripping-wet leaf2, dripping-wet leaf 2, dripping-wet leaf-2",9," Vegetative organ - Leaf","GO:0006633 - fatty acid biosynthetic process","TO:0000493 - leaf composition trait","PO:0009025 - vascular leaf ",null,null,"LOC_Os11g30560.1","Os03g0169800","Os03g0302900","Os03g0315800",2.8938558,2.555285,null,"DMT1","OsMCA1, MCA1, OsDMT1, OsDMT1/OsMCA1","DWARF AND MULTI-TILLERING1","Plasma membrane protein OsMCA1, Mid1-complementing activity1, dwarf and multi-tillering 1",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0070509 - calcium ion import, GO:0009685 - gibberellin metabolic process, GO:0050801 - ion homeostasis, GO:0005886 - plasma membrane, GO:0005887 - integral to plasma membrane, GO:0048528 - post-embryonic root development, GO:0007638 - mechanosensory behavior","TO:0000456 - spikelet number, TO:0002675 - gibberellic acid content, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os03g0157300","LOC_Os03g06120.3, LOC_Os03g06120.2, LOC_Os03g06120.1","Os03g0130900","Os02g0648100","Os12g0178633",1.4716153,1.3121089,null,"LKG","Lk g","LONG KERNEL GIMBOUZU","'Gimbozu mutant' long grain",null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length",{"$nulls":3},"Os10g0437600","Os10g0437600","Os04g0469800",0,2.068486,null,"HPR2(T)","hpr2(t), hpr2","HYDROXYPROLINE RESISTANCE2","hydroxyproline resistance2, hydroxyproline resistance 2, hydroxyproline resistance-2",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000482 - chemical stress sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os04g0460600","Os03g0100800","Os11g0530600",3.9305646,4.57839,null,"qGPP-1-2(t) (gpp3.2)","qGPP-1-2(t) (gpp3.2)","grains per panicle (QTL)-3-2(t)","grains per panicle (QTL)-3-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0810100","Os04g0460600","Os09g0441900",3.2746305,1.8199071,{"$nulls":3},"Os07g0603800",0,-1.1091557]
[null,null,"Os10g0180800",{"$nulls":3},"Os05g0463800","LOC_Os05g38820",-1.6632209,"Os03g0239300","LOC_Os03g13600","C2H2",1.4908657,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os09g0304500","Transcript","weakly similar to ( 119) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",2.1891744,{"$nulls":3},"Os10g0378100","Os01g0165000","Os08g0460000","Os08g0460000",4.8411865,7.935741,null,"Os10g0450000",7.397053,"Os11g0470500",-2.5822263,{"$nulls":5},"Os05g0227600",2.6376226,3.817176,{"$nulls":5},"Os05g0103200",2.04943,2.154865,null,"Os11g0705200",0,-1.414639,{"$nulls":9},"NAL2","nal2, nal3, cul2, OsWOX3A, WOX3A, Os NS, NS, OsNS, OsWOX3, OsNS1/OsNS2, OsPRS","NARROW LEAF 2","narrow leaf2, narrow leaf 2, narrow leaf-2, curl leaf-2, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3A",11," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009740 - gibberellic acid mediated signaling, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009734 - auxin mediated signaling pathway, GO:0048364 - root development, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis","TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height, TO:0001013 - lateral root number, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000166 - gibberellic acid sensitivity, TO:0000402 - grain width, TO:0000656 - root development trait, TO:0000370 - leaf width, TO:0000492 - leaf shape, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0009025 - vascular leaf , PO:0007520 - root development stage ","Os11g0102100","LOC_Os11g01130.1, LOC_Os11g01130.2",null,"Os02g0198300","Os01g0825000","Os03g0425000",2.0332432,2.554466,null,"_","SIP7","_","SKIP interacting protein 7, SKIPa-interacting protein 7, SKIPa-interacting protein 7",2," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0000902 - cell morphogenesis","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0260500 ","LOC_Os02g15980.1","Os03g0170400","Os06g0203800","Os09g0104200",0,1.1544582,null,"LKI2","lki2"," LONG KERNEL IRAT13 2","IRAT 13' long grain2, IRAT 13' long grain 2, 'IRAT 13' long grain-2",null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length","PO:0009010 - seed ",null,null,"Os06g0498400","Os06g0498400","Os11g0525600",1.4500412,2.0368564,null,"HPR3(T)","hpr3(t), hpr3","HYDROXYPROLINE RESISTANCE3","hydroxyproline resistance3, hydroxyproline resistance 3, hydroxyproline resistance-3",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000482 - chemical stress sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0127200","Os01g0303600","Os03g0773700",0,4.5269656,null,"qGPP-1-2(t) (gpp4.1)","qGPP-1-2(t) (gpp4.1)","grains per panicle (QTL)-4-1(t)","grains per panicle (QTL)-4-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0170900","Os01g0127200","Os05g0455200",4.5274816,1.769432,{"$nulls":3},"Os04g0668900",0,-1.6065053]
[{"$nulls":6},"Os08g0174500","LOC_Os08g07740",{"$error":"#N/A"},"Os03g0279700","LOC_Os03g17150","C2H2",1.7891141,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0310600","Transcript","weakly similar to ( 150) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.4500562,{"$nulls":3},"Os10g0378000","Os01g0176200","Os05g0550300","Os05g0550300",4.8264666,6.0061736,null,"Os08g0380100",7.3613625,"Os10g0515100",-2.5606892,{"$nulls":5},"Os08g0460000",4.8411865,7.935741,{"$nulls":5},"Os09g0510500",4.8006577,3.5891144,null,"Os05g0564400",0,-1.0946509,{"$nulls":9},"DRP7","drp7, OsHSD1, LGF1, HSD1","DRIPPING-WET LEAF 7","dripping-wet leaf7, dripping-wet leaf 7, dripping-wet leaf-7, hydroxysteroid dehydrogenase 1, Leaf Gas Film 1, dripping wet leaf 7",11," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0006629 - lipid metabolic process, GO:0042335 - cuticle development, GO:0006633 - fatty acid biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0034309 - monohydric alcohol biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0016021 - integral to membrane, GO:0010166 - wax metabolic process, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009413 - response to flooding, GO:0005783 - endoplasmic reticulum, GO:0009741 - response to brassinosteroid stimulus, GO:0055088 - lipid homeostasis","TO:0000602 - total fat content, TO:0002677 - brassinosteroid sensitivity, TO:0000524 - submergence tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000114 - flooding related trait, TO:0000207 - plant height, TO:0000493 - leaf composition trait, TO:0000145 - internode length","PO:0009025 - vascular leaf , PO:0020104 - leaf sheath ","Os11g0499600","LOC_Os11g30560.1","LOC_Os12g01120.1","Os12g0263000","Os05g0571200","Os01g0134500",1.9972857,2.5228798,null,"CYP20-2","OsCYP20-2, OsCYP-11, OsNuCYP20-2","CYCLOPHILIN 20-2","cyclophilin 20-2, rice thylakoid lumenal cyclophilin OsCYP20-2, cyclophilin 11",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth, GO:0009409 - response to cold, GO:0009533 - chloroplast stromal thylakoid, GO:0006457 - protein folding, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0080050 - regulation of seed development, GO:0009535 - chloroplast thylakoid membrane, GO:0009543 - chloroplast thylakoid lumen, GO:0010275 - NAD(P)H dehydrogenase complex assembly, GO:0000245 - spliceosome assembly, GO:0009507 - chloroplast, GO:0005634 - nucleus","TO:0000303 - cold tolerance, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0000040 - panicle length, TO:0002730 - grain shape, TO:0000734 - grain length",null,"Os05g0103200","LOC_Os05g01270.1","Os04g0490500","Os02g0494000","Os06g0661400",1.0342876,1.1490701,null,"LK1","lk1(t), lkna, lk1","NAGAYAMA 77402A LONG GRAIN 1","Nagayama 77402a long grain1, 'Nagayama 77402a (N179)' long grain, long kernel-1",null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length","PO:0009010 - seed ",null,null,"Os02g0673700","Os02g0673700","Os05g0389000",3.2207673,2.0078347,null,"IBPH1","IBph1","INHIBITOR FOR BPH 1","Inhibitor for Bph1",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os05g0554400","Os03g0368900","Os09g0541000",0,4.4975114,null,"qGPP-1-2(t) (gpp8.1)","qGPP-1-2(t) (gpp8.1)","grains per panicle (QTL)-8-1(t)","grains per panicle (QTL)-8-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os12g0274700","Os05g0554400","Os10g0554200",0,1.6377968,{"$nulls":3},"Os02g0134300",0,-1.9522705]
[{"$nulls":6},"Os08g0438400","LOC_Os08g34010",-1.6525875,"Os03g0820400","LOC_Os03g60570","C2H2",-1.4386396,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os03g0198500","Transcript","moderately similar to ( 298) AT1G47740 | Symbols: | unknown protein | chr1:17567903-17569035 FORWARD DUF862 protein|ethylene-responsive element-binding protein, putative, expressed",1.7501227,{"$nulls":3},"Os02g0173100","Os08g0345700","Os03g0421800","Os03g0421800",4.3816485,2.3464868,null,"Os06g0118700",7.3395557,"Os05g0555600",-2.5385206,{"$nulls":5},"Os03g0856700",1.9106296,1.865975,{"$nulls":5},"Os01g0633100",1.5410696,1.1146822,null,"Os01g0239100",0,-1.1356636,{"$nulls":9},"RL3","rl3(rl1), rl1, rl3, cul10","ROLLED LEAF 3","rolled leaf3, rolled leaf 3, rolled leaf-3, curl leaf-10",12," Vegetative organ - Leaf","GO:0030154 - cell differentiation","TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000085 - leaf rolling","PO:0009025 - vascular leaf ",null,null,"LOC_Os03g33650.1","Os03g0425000","Os03g0667100","Os12g0541300",5.8683686,2.361488,null,"APO1","apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393, Pbl6/APO1, Pbl6, OsPbl6","ABERRANT PANICLE ORGANIZATION 1","aberrant panicle organization 1, aberrant panicle organization-1, STRONG CULM 2, STRONG CULM2, F-box protein 321, PRIMARY BRANCH LENGTH6, PRIMARY BRANCH LENGTH 6",6," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030154 - cell differentiation","TO:0000068 - lodging incidence, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000339 - stem thickness, TO:0002639 - shoot branching, TO:0000040 - panicle length, TO:0000641 - primary branch length, TO:0000456 - spikelet number, TO:0000052 - primary branching of inflorescence, TO:0000051 - stem strength, TO:0000499 - flower anatomy and morphology trait, TO:0000089 - panicle type, TO:0000371 - yield trait","PO:0009082 - spikelet floret , PO:0009049 - inflorescence ","Os06g0665400","LOC_Os06g45460.1","Os06g0693200","Os02g0218600","Os01g0670800",1.4240936,1.0322542,null,"LOX3","Lox3*, lox3(t), LOX-3, Lox3, OsLOX4, LOX4","LIPOXYGENASE 3","Lipoxygenase3, Lipoxygenase 3, Lipoxygenase-3, Putative lipoxygenase 3, Lipoxygenase 4",3," Seed - Physiological traits - Taste","GO:0031408 - oxylipin biosynthetic process, GO:0005506 - iron ion binding, GO:0016165 - lipoxygenase activity, GO:0055114 - oxidation reduction","TO:0000488 - seed composition based quality trait","PO:0009010 - seed ","Os03g0700400","LOC_Os03g49350.1","Os11g0525600","Os11g0525600","Os02g0174100",0,1.9949021,null,"IC","ic*, Ic","IRON DEFICIENCY CHLOROSIS","iron deficiency chlorosis, Iron deficiency chlorosis tolerance",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000224 - iron sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os08g0562500","Os11g0530600","Os02g0257300",3.904754,4.477321,null,"qGPP-1-2(t) (gpp9.1)","qGPP-1-2(t) (gpp9.1)","grains per panicle (QTL)-9-1(t)","grains per panicle (QTL)-9-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0174100","Os08g0562500","Os03g0841800",0,1.6212746,{"$nulls":3},"Os07g0186000",-1.7293295,-1.968882]
[{"$nulls":6},"Os08g0163800","LOC_Os08g06659",-1.6463923,"Os04g0444100","LOC_Os04g36650","C2H2",-1.0263926,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os11g0543300","Transcript","moderately similar to ( 217) AT3G50170 | Symbols: | unknown protein | chr3:18602337-18603738 REVERSEDUF247 protein|plant protein of unknown function domain containing protein, expressed",-1.0513479,{"$nulls":3},"Os03g0248300","Os01g0127900","Os02g0815200","Os02g0815200",4.2946944,4.7087307,null,"Os06g0218600",7.3317027,"Os04g0103601",-2.5284827,{"$nulls":5},"Os01g0134500",1.9972857,2.5228798,{"$nulls":5},"Os03g0129300",2.203059,3.3167012,null,"Os01g0597800",-4.481426,-2.084027,{"$nulls":9},"NAL3","nal3(nal2), nal2, nal3, cul3, OsWOX3A, WOX3A, WOX3, OsWOX3, OsNS, OsNS1/OsNS2, OsPRS","NARROW LEAF 3","narrow leaf3, narrow leaf 3, narrow leaf-3, curl leaf-3, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3, WUSCHEL-related homeobox 3A",12," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0048366 - leaf development, GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000276 - drought tolerance, TO:0000370 - leaf width, TO:0000402 - grain width, TO:0000346 - tiller number, TO:0000492 - leaf shape, TO:0000149 - seed width, TO:0001013 - lateral root number, TO:0002675 - gibberellic acid content, TO:0000655 - leaf development trait, TO:0000166 - gibberellic acid sensitivity","PO:0009025 - vascular leaf , PO:0001050 - leaf development stage ","Os12g0101600","LOC_Os12g01120.1",null,"Os01g0134500","Os09g0241100","Os01g0866400",-3.1494305,2.356459,null,"LK3","lk3(t), lk3(t)*, SG3, GS3, SG3-GS3, OsGW3, OsGS3, RGG3/GS3/Mi/OsGGC1, RGG3, Mi, OsGGC1, GGC1, OsSYL3, SYL3","LONG KERNEL 3","long kernel 3, long kernel-3, grain size, grain length and weight protein, GRAIN SIZE 3, G gamma subunit GS3, Heterotrimeric G Protein gamma3 Subunit, style length 3",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0007275 - multicellular organismal development, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000592 - 1000-dehulled grain weight, TO:0000382 - 1000-seed weight, TO:0000402 - grain width, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002731 - grain length to width ratio, TO:0000137 - days to heading, TO:0000396 - grain yield, TO:0000146 - seed length, TO:0000391 - seed size, TO:0000162 - seed quality, TO:0002730 - grain shape, TO:0000040 - panicle length, TO:0000734 - grain length","PO:0009049 - inflorescence , PO:0009010 - seed ","Os03g0407400",null,"Os07g0686800","Os01g0507000","Os01g0715400",0,1.0224143,null,"ORL1","orl1","ORGANLESS 1","organless1, organless 1, organless embryo-1",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os01g0915600","Os01g0915600","Os02g0198300",2.1420994,1.8940853,null,"LR","lr(t)*, lr","LEAF ROLLING UNDER DROUGHT STRESS","leaf rolling under drought stress",null," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance","PO:0000003 - whole plant ",null,null,"Os02g0805250","Os02g0257300","Os03g0592500",3.8585846,4.4201694,null,"qGYD-2","qGYD-2","grain yield per plant (QTL)-2","grain yield per plant (QTL)-2",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0778100","Os02g0805250","Os05g0211100",0,1.6188742]
[{"$nulls":6},"Os01g0193900","LOC_Os01g09760",-1.6069416,"Os07g0581366","LOC_Os07g39310","C2H2",1.3780867,null,"17.5.2","hormone metabolism.ethylene.signal transduction","Os02g0558700","Transcript","AP2 AP2 protein|dehydration-responsive element-binding protein, putative, expressed",-1.4129696,{"$nulls":3},"Os10g0317900","Os03g0310600","Os07g0567400","Os07g0567400",4.278233,5.170736,null,"Os09g0459900",7.307221,"Os06g0697200",-2.5212672,{"$nulls":5},"Os10g0467800",7.1616282,6.027947,{"$nulls":5},"Os10g0564500",1.8656765,1.4809216,null,"Os01g0246700",-2.4092262,-1.8576914,{"$nulls":9},"SHL4","shl4, sh4, OsAGO7, SHO2, AGO7, SHL4/SHO2","SHOOTLESS 4","shootless 4, shootless-4, Protein argonaute 7, Protein SHOOTLESS 4, Protein SHOOT ORGANIZATION 2, SHOOT ORGANIZATION2, ARGONAUTE 7, Argonaute 7",3," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Seed - Morphological traits - Embryo","GO:0003676 - nucleic acid binding, GO:0016246 - RNA interference, GO:0010492 - maintenance of shoot apical meristem identity, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait, TO:0000206 - leaf angle, TO:0002681 - leaf curling","PO:0009009 - plant embryo , PO:0020144 - apical meristem ","Os03g0449200","LOC_Os03g33650.1","LOC_Os01g52050.1","Os05g0382600","Os01g0646300","Os03g0769100",2.764268,2.3437655,null,"LHS1","OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO, OsLHS1, OsLG3b, LG3b, qLGY3, LGY3, DLN80, OsDLN80","LEAFY HULL STERILE 1","MADS box gene1, leafy hull sterile1, leafy hull sterile 1, LEAFY HULL STERILE1, naked seed rice, over developed palea, MADS-box transcription factor 1, Protein LEAFY HULL STERILE 1, Protein SEPALLATA-like, abnormal floral organs, long grain 3b, DLN repressor 80, DLN motif protein 80, Oat-like rice",3," Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0042127 - regulation of cell proliferation, GO:0005515 - protein binding, GO:0005634 - nucleus, GO:0010093 - specification of floral organ identity, GO:0010582 - floral meristem determinacy, GO:0010076 - maintenance of floral meristem identity, GO:0009553 - embryo sac development, GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0048316 - seed development, GO:0001708 - cell fate specification, GO:0009908 - flower development, GO:0045449 - regulation of transcription, GO:0048437 - floral organ development, GO:0045165 - cell fate commitment, GO:0030154 - cell differentiation, GO:0003677 - DNA binding, GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0045595 - regulation of cell differentiation","TO:0001000 - glume cover, TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000437 - male sterility, TO:0006012 - carpel anatomy and morphology trait, TO:0000274 - floret anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000499 - flower anatomy and morphology trait, TO:0000436 - spikelet sterility, TO:0000344 - days to flower, TO:0000207 - plant height, TO:0006037 - carpel shape, TO:0006009 - lodicule anatomy and morphology trait, TO:0002659 - pistil number, TO:0006010 - lodicule number, TO:0000209 - palea number, TO:0000208 - lemma number, TO:0006029 - glume number, TO:0006038 - floral organ number, TO:0000592 - 1000-dehulled grain weight, TO:0000304 - seed thickness, TO:0000149 - seed width, TO:0000146 - seed length, TO:0000399 - grain thickness, TO:0000416 - embryosac abortion, TO:0000455 - seed set percent, TO:0000657 - spikelet anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000670 - floret number, TO:0000223 - pistil anatomy and morphology trait, TO:0000266 - chalky endosperm, TO:0000650 - lemma length, TO:0000225 - stamen number, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000397 - grain size, TO:0000377 - cooked grain elongation, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000622 - flower development trait, TO:0000245 - pollen free, TO:0000417 - lemma and palea pubescence","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009030 - carpel , PO:0009039 - glume , PO:0009046 - flower , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0001049 - lodicule development stage , PO:0001048 - palea development stage , PO:0001047 - lemma development stage , PO:0006000 - caryopsis hull , PO:0009062 - gynoecium , PO:0009029 - stamen , PO:0009010 - seed , PO:0007615 - flower development stage , PO:0009037 - lemma , PO:0009036 - lodicule , PO:0009038 - palea , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000229 - flower meristem ","Os03g0215400","LOC_Os03g11614.1","Os04g0469800","Os06g0217300","Os08g0130000",2.5103195,1.0199447,null,"PROL","Prol*, Pro6","PROLAMIN","Prolamin, Prolamin-6",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os08g0115200","Os08g0115200","Os03g0856700",1.9106296,1.865975,null,"PCS","pcs","PENTACHLOROBENZYL ALCOHOL SUSCEPTIBILITY","pentachlorobenzyl alcohol susceptibility",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000058 - herbicide sensitivity, TO:0000482 - chemical stress sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os02g0450000","Os05g0178300","Os07g0273700",5.1888843,4.3932843,null,"qGYD-6-2","qGYD-6-2","grain yield per plant (QTL)-6-2","grain yield per plant (QTL)-6-2",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os12g0292400","Os02g0450000","Os03g0786400",0,1.5608987]
[{"$nulls":6},"Os01g0128000","LOC_Os01g03720",-1.60054,"Os01g0192000","LOC_Os01g09620","C3H",2.8330657,null,"17.7.1.3","hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase","Os02g0110200","Transcript","moderately similar to ( 367) AT4G15440 | Symbols: HPL1, CYP74B2 | HPL1 (HYDROPEROXIDE LYASE 1); electron carrier/ heme binding / iron ion binding / monooxygenase | chr4:8835869-8838462 FORWARDmoderately similar to ( 278) C74A4_ORYSA Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase 4) (Hydroperoxide dehydrase 4) - Oryza sativa (Rice) protein|cytochrome P450, putative, expressed",3.3673182,{"$nulls":3},"Os09g0264400","Os01g0279300","Os03g0271500","Os03g0271500",4.239015,2.849537,null,"Os12g0573600",7.284209,"osa-miR439g",-2.5014517,{"$nulls":5},"Os03g0712800",2.4170392,1.5344108,{"$nulls":5},"Os01g0231000",1.753673,1.1733681,null,"Os11g0210500",3.2258322,-2.2529678,{"$nulls":9},"COL","col","COLLARLESS","collarless",4," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000335 - ligule shape","PO:0020105 - ligule ",{"$nulls":3},"Os03g0856700","Os09g0455300","Os02g0125700",1.2156931,2.3285046,null,"MADS4","OsMADS4, PI1, DLN140, OsDLN140","MADS BOX GENE 4","MADS box gene4, MADS-box transcription factor 4, GLOBOSA(GLO)-like MADS-box gene-4, DLN repressor 140, DLN motif protein 140",5," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0030154 - cell differentiation","TO:0000499 - flower anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000622 - flower development trait","PO:0009046 - flower , PO:0007615 - flower development stage , PO:0001083 - inflorescence development stage ","Os05g0423400","LOC_Os05g34940.3, LOC_Os05g34940.2, LOC_Os05g34940.1","Os01g0206700","Os02g0787200","Os04g0470600",0,1.0198911,null,"RE1","re1","REDUCED EMBRYO 1","reduced embryo-1, REDUCED EMBRYO1",null," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0009887 - organ morphogenesis, GO:0009960 - endosperm development, GO:0009888 - tissue development","TO:0000575 - endosperm related trait, TO:0000064 - embryo related trait, TO:0000587 - endosperm quality","PO:0009009 - plant embryo , PO:0009089 - endosperm ",null,null,"Os02g0208900","Os02g0208900","Os09g0441900",3.2746305,1.8199071,null,"PII","Pi i, Pii, Pi-i, Pii(t)","PYRICULARIA ORYZAE RESISTANCE-I","Pyricularia oryzae resistance-i, Magnaporthe grisea resistance-I Blast resistance I",9," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000510 - penetrated to total root ratio","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os01g0659900","Os07g0229700","Os01g0869800",0,4.383471,null,"qGYD-7-3","qGYD-7-3","grain yield per plant (QTL)-7-3","grain yield per plant (QTL)-7-3",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os06g0474200","Os01g0659900","Os08g0115200",1.2290587,1.5523863]
[{"$nulls":6},"Os08g0535800","LOC_Os08g42400",-1.5443617,"Os01g0917400","LOC_Os01g68860","C3H",1.7494059,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os01g0701700","Transcript","moderately similar to ( 308) AT4G36470 | Symbols: | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | chr4:17215128-17216475 REVERSEmoderately similar to ( 226) BAMT_ANTMA Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon)Methyltransf_7 protein|SAM dependent carboxyl methyltransferase, putative, expressed",-2.0907042,{"$nulls":3},"Os06g0641500","Os10g0516500","Os03g0582000","Os03g0582000",4.1622157,4.2610555,null,"Os03g0675600",7.2754326,"Os02g0668100",-2.4695454,{"$nulls":5},"Os06g0703500",1.0499412,2.0117123,{"$nulls":5},"Os02g0657000",3.3227575,4.613399,null,"Os01g0955100",-1.683084,-1.1783794,{"$nulls":9},"D61","d61*, dwf42, d61, OsBRI1, OSBRI1, BRI1, Os BRI1, Osbri1, OsBRKq1, BRKq1","DWARF 61","dm-type dwarf, dwarf-61, DWARF61, BRASSINOSTEROID INSENSITIVE 1, BR receptor BRASSINOSTEROID INSENSITIVE1, BRASSINOSTEROID-INSENSITIVE1, brassinosteroid insensitive 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0001578 - microtubule bundle formation, GO:0009741 - response to brassinosteroid stimulus, GO:0016049 - cell growth, GO:0004903 - growth hormone receptor activity, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006468 - protein amino acid phosphorylation, GO:0009647 - skotomorphogenesis, GO:0009753 - response to jasmonic acid stimulus, GO:0009729 - detection of brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus","TO:0000145 - internode length, TO:0000357 - growth and development trait, TO:0000085 - leaf rolling, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000255 - sheath blight disease resistance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0006347 - stem intercalary meristem , PO:0009047 - stem , PO:0020142 - stem internode , PO:0020104 - leaf sheath , PO:0020033 - coleoptile ","Os01g0718300","LOC_Os01g52050.1",null,"Os05g0447200","Os03g0811100","Os01g0823500",0,2.3226073,null,"MFO1","OsMADS6, MADS6, OsMFO1","MOSAIC FLORAL ORGANS 1","MADS box gene6, AGL6-like MADS Box gene, mosaic floral organs 1",2," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0009908 - flower development, GO:0030154 - cell differentiation, GO:0005515 - protein binding, GO:0003700 - transcription factor activity, GO:0009909 - regulation of flower development, GO:0010093 - specification of floral organ identity, GO:0006350 - transcription, GO:0010229 - inflorescence development","TO:0006022 - floral organ development trait, TO:0000621 - inflorescence development trait","PO:0025477 - floral organ primordium , PO:0020003 - plant ovule , PO:0007615 - flower development stage , PO:0001083 - inflorescence development stage ","Os02g0682200 ","LOC_Os02g45770.1","Os08g0546300","Os01g0769700","Os06g0237502",0,1.0056585,null,"RE2","re2","REDUCED EMBRYO 2","reduced embryo2, reduced embryo 2, reduced embryo-2",10," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0009887 - organ morphogenesis, GO:0009960 - endosperm development, GO:0009888 - tissue development","TO:0000575 - endosperm related trait, TO:0000064 - embryo related trait, TO:0000587 - endosperm quality","PO:0009009 - plant embryo , PO:0009089 - endosperm ",null,null,"Os03g0826600","Os03g0826600","Os05g0455200",4.5274816,1.769432,null,"PIIS2","Pi is2(Rb5), Rb5, Piis2, Pi-is-2, Rb-5","PYRICULARIA ORYZAE RESISTANCE-IS-2","PPyricularia oryzae resistance-is-2, Magnaporthe grisea resistance-is2, Blast resistance is2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000512 - Plant survival percentage under submergence, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os05g0571200","Os08g0512600","Os01g0279100",2.9026222,4.379773,null,"qHID-1-2(t) (qHID1-1)","qHID-1-2(t) (qHID1-1)","harvest index (QTL)-1-2(t)","harvest index (QTL)-1-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0711100","Os05g0571200","Os12g0168700",0,1.5418793]
[{"$nulls":6},"Os01g0733200","LOC_Os01g53220",-1.5364038,"Os07g0568300","LOC_Os07g38090","C3H",-0.9563233,null,"17.8.1","hormone metabolism.salicylic acid.synthesis-degradation","Os07g0513200","Transcript","highly similar to ( 542) AT1G05670 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr1:1698574-1702715 REVERSEmoderately similar to ( 271) RF1_ORYSA Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) protein|PPR repeat containing protein, expressed",-1.8564715,{"$nulls":3},"Os01g0544200","Os01g0224700","Os03g0102700","Os03g0102700",4.004913,3.442166,null,"Os10g0552600",7.2442303,"Os04g0648200",-2.462386,{"$nulls":5},"Os09g0510500",4.8006577,3.5891144,{"$nulls":5},"Os01g0915600",1.4386014,1.1191101,null,"Os01g0734000",0,-1.2598414,{"$nulls":9},"DEC","dec*, dec","DECUSSATE","decussate (phyllotactic abnormality), decussate",null," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000335 - ligule shape","PO:0020105 - ligule ",null,null,"LOC_Os03g11600.1, LOC_Os03g11600.2","Os08g0532200","Os07g0605200","Os10g0163040",3.7016354,2.3213081,null,"MADS7","OsMADS7, OsMADS45, FDRMADS1, RMADS216, AGL6, M79, MADS45, Os MADS7, Os MADS45, OsMADS7/45","MADS BOX GENE 7","MADS box gene7, Protein AGAMOUS-like 6, MADS-box protein 45, MADS box gene45, MADS-box transcription factor 7, Protein AGAMOUS-like 6",8," Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009266 - response to temperature stimulus, GO:0010229 - inflorescence development, GO:0010208 - pollen wall assembly, GO:0030154 - cell differentiation, GO:0009555 - pollen development, GO:0009908 - flower development, GO:0048653 - anther development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010582 - floral meristem determinacy","TO:0006023 - lodicule development trait, TO:0006009 - lodicule anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait, TO:0002616 - flowering time, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000245 - pollen free, TO:0006012 - carpel anatomy and morphology trait, TO:0000437 - male sterility, TO:0000432 - temperature response trait, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000621 - inflorescence development trait","PO:0025585 - floral organ formation stage , PO:0001048 - palea development stage , PO:0001049 - lodicule development stage , PO:0001083 - inflorescence development stage , PO:0001047 - lemma development stage , PO:0001007 - pollen development stage , PO:0001004 - anther development stage ","Os08g0531700","LOC_Os08g41950.2, LOC_Os08g41950.1","Os07g0568700","Os03g0640800","Os03g0170400",0,0.98200226,null,"RE3","re3","REDUCED EMBRYO 3","reduced embryo3, reduced embryo 3, reduced embryo-3",null," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0009960 - endosperm development, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000575 - endosperm related trait, TO:0000064 - embryo related trait, TO:0000587 - endosperm quality","PO:0009009 - plant embryo , PO:0009089 - endosperm ",null,null,"Os01g0310800","Os01g0310800","Os05g0204600",0,1.7392745,null,"PISE2","Pi se2(Rb2), Rb2, Pise2, Pi-se-2, Rb-2","PYRICULARIA ORYZAE RESISTANCE-SE-2","Pyricularia oryzae resistance-se-2, Magnaporthe grisea resistance-se2, Blast resistance se2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000517 - relative shoot elongation under submergence","PO:0009025 - vascular leaf ",null,null,"Os09g0241100","Os03g0592500","Os05g0217800",3.1225374,4.3420224,null,"qHID-3-1(t) (qHID1-1)","qHID-3-1(t) (qHID1-1)","harvest index (QTL)-3-1(t)","harvest index (QTL)-3-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os06g0264200","Os09g0241100","Os01g0174000",0,1.4943272]
[{"$nulls":6},"Os05g0442700","LOC_Os05g37080",-1.5360001,"Os12g0515500","LOC_Os12g33090","C3H",-1.0432993,null,"17.6.1","hormone metabolism.gibberelin.synthesis-degradation","Os11g0265800","Transcript","very weakly similar to (80.9) AT1G52820 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:19669216-19670321 FORWARD protein|retrotransposon protein, putative, Ty3-gypsy subclass, expressed",3.7052648,{"$nulls":3},"Os02g0503100","Os02g0193000","Os05g0426800","Os05g0426800",3.9381912,3.722933,null,"Os01g0716200",7.2312036,"Os04g0127500",-2.4608722,{"$nulls":5},"Os01g0670800",1.4240936,1.0322542,{"$nulls":5},"Os11g0530600",3.9305646,4.57839,null,"Os11g0210300",2.3903496,-1.0419011,{"$nulls":9},"HAP3B","OsHAP3B, OsNF-YB-3, NFYB3, OsNF-YB4, NF-YB4, NFYB4, OsHAP3C, HAP3C","HAP3B SUBUNIT OF CCAAT-BOX BINDING COMPLEX","rice HAP3B, Nuclear transcription factor Y subunit B-3, Transcriptional activator HAP3B, NUCLEAR FACTOR-Y subunit B4, NUCLEAR FACTOR-Y subunit NF-YB4, NF-YB subunit 4, NF-YB family 4",5," Vegetative organ - Leaf,  Other","GO:0009658 - chloroplast organization, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent","TO:0002715 - chloroplast development trait",null,"Os05g0573500","LOC_Os05g49780.1","LOC_Os01g07500.1","Os09g0380200","Os07g0681300","Os03g0778100",0,2.3129609,null,"MADS13","OsMADS13, MAF1, RMADS206","MADS BOX GENE 13","MADS box gene13, MADS-box transcription factor 13",12," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048283 - indeterminate inflorescence morphogenesis, GO:0043565 - sequence-specific DNA binding, GO:0010582 - floral meristem determinacy, GO:0010229 - inflorescence development, GO:0010622 - specification of ovule identity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048481 - ovule development, GO:0003700 - transcription factor activity, GO:0005515 - protein binding, GO:0006350 - transcription, GO:0005634 - nucleus","TO:0000621 - inflorescence development trait, TO:0000223 - pistil anatomy and morphology trait, TO:0000358 - female sterility","PO:0001083 - inflorescence development stage ","Os12g0207000","LOC_Os12g10540.1, LOC_Os12g10540.2, LOC_Os12g10540.3, LOC_Os12g10540.4, LOC_Os12g10540.5","Os07g0549600","Os07g0693000","Os05g0469600",8.226357,0,null,"S","s Kr*, skr","SUPPRESSOR FOR GRAIN SIZE","suppressor for grain size (Kr1, Kr2)",null," Seed - Morphological traits - Grain shape",null,"TO:0000391 - seed size","PO:0009010 - seed ",null,null,"Os04g0436100","Os04g0436100","Os03g0841800",0,1.6212746,null,"PISE3","Pi se3(Rb3), Rb3, Pise3, Pi-se-3, Rb-3","PYRICULARIA ORYZAE RESISTANCE-SE-3","Pyricularia oryzae resistance-se-3, Magnaporthe grisea resistance-se3, Blast resistance se3",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000518 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os03g0340500","Os08g0473900","Os06g0131700",5.644571,4.2799582,null,"qHID-3-2(t) (qHID1-1)","qHID-3-2(t) (qHID1-1)","harvest index (QTL)-3-2(t)","harvest index (QTL)-3-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0786400","Os03g0340500","Os02g0220400",0,1.3303136]
[{"$nulls":6},"Os04g0508500","LOC_Os04g42950",-1.5152645,"Os02g0178100","LOC_Os02g08150","CO-like",-1.4953613,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os03g0856700","Transcript","moderately similar to ( 434) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 712) GAOX1_ORYSA Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 1, putative, expressed",1.865975,{"$nulls":3},"Os02g0504000","Os10g0462900","Os11g0530600","Os11g0530600",3.9305646,4.57839,null,"Os02g0299200",7.222168,"Os02g0704000",-2.4485574,{"$nulls":5},"Os03g0563300",2.476731,3.0603971,{"$nulls":5},"Os03g0123500",4.8892865,3.811927,null,"Os03g0852300",-2.2671444,-1.1165094,{"$nulls":9},"HAP3C","OsHAP3C, OsNF-YB-4, NFYB4, OsNF-YB3, NF-YB3, NFYB3, OsHAP3B, HAP3B","HAP3C SUBUNIT OF CCAAT-BOX BINDING COMPLEX","rice HAP3C, Nuclear transcription factor Y subunit B-4, Transcriptional activator HAP3C, NUCLEAR FACTOR-Y subunit B3, NUCLEAR FACTOR-Y subunit NF-YB3, NF-YB subunit 3, NF-YB family 3",5," Vegetative organ - Leaf,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus",null,null,"Os05g0463800","LOC_Os05g38820.4","LOC_Os01g68000.1","Os06g0498400","Os02g0811000","Os11g0167800",0,2.2365227,null,"MADS17","OsMADS17, NMADS3, RMADS213, nmads3","MADS BOX GENE 17","MADS box gene17, MADS-box transcription factor 17",4," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0003700 - transcription factor activity, GO:0030912 - response to deep water, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005515 - protein binding","TO:0000621 - inflorescence development trait, TO:0000524 - submergence tolerance","PO:0001083 - inflorescence development stage ","Os04g0580700","LOC_Os04g49150.1","Os06g0474200","Os05g0537300","Os11g0141900",6.828964,0,null,"SDRA","Sdra (Sd), Sdra, Sdua, Sdr6","SEED DORMANCY A","Seed dormancy-a, Seed dormancy-6",null," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",null,null,"Os09g0455500","Os09g0455500","Os02g0762600",3.7549706,1.5669626,null,"PISH","Pi sh, Pish, Pi-sh, Pish(t)","PYRICULARIA ORYZAE RESISTANCE SH","Pyricularia oryzae resistance-sh, Magnaporthe grisea resistance-sh, Blast resistance sh",1," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000519 - rooting depth, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os01g0782100","LOC_Os01g57340.1","Os01g0357100","Os01g0323300","Os01g0938100",3.2042682,4.273134,null,"qHID-4-3(t) (qHID1-1)","qHID-4-3(t) (qHID1-1)","harvest index (QTL)-4-3(t)","harvest index (QTL)-4-3(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os04g0127800","Os01g0357100","Os04g0127800",0,1.31775]
[{"$nulls":6},"Os02g0178100","LOC_Os02g08150",-1.4953613,"Os02g0731700","LOC_Os02g49880","CO-like",1.7829956,null,"17.6.1.11","hormone metabolism.gibberelin.synthesis-degradation.GA20 oxidase","Os01g0883800","Transcript","moderately similar to ( 369) AT4G25420 | Symbols: GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase | chr4:12990982-12992409 REVERSEhighly similar to ( 655) GAOX2_ORYSA Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) PcbC 2OG-FeII_Oxy protein|gibberellin 20 oxidase 2, putative, expressed",1.0044001,{"$nulls":3},"Os02g0601500","Os05g0460000","Os03g0751400","Os03g0751400",3.8618753,2.9028213,null,"Os11g0499600",7.2071304,"Os07g0613600",-2.4041827,{"$nulls":5},"Os05g0563000",4.3473687,3.2179844,{"$nulls":5},"Os03g0735000",2.4854543,2.2307365,null,"Os10g0527800",-1.5965699,-2.9627552,{"$nulls":9},"FLO4","FLO4-4, flo4, flo4-2, flo4-3, ppdk, OsPPDK, PPDK1, CPDK1, PPDKB, OsPPDKB, cyOsPPDKB, OsPBDK, PBDK, osppdkb, PPD, cyPPDK","FLOURY ENDOSPERM 4","floury endosperm4, floury endosperm 4, pyruvate orthophospate dikinase, \\Pyruvate, phosphate dikinase 1, chloroplastic\\\", \\\"Pyruvate, orthophosphate dikinase 1\\\", pyruvate orthophosphate dikinase, pyruvate orthophosphate dikinase B, cytosolic pyruvate orthophosphate dikinase, orthophosphate dikinase, Pyruvate phosphate dikinase\"",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0050242 - pyruvate, phosphate dikinase activity, GO:0019252 - starch biosynthetic process, GO:0016772 - transferase activity, transferring phosphorus-containing groups, GO:0016310 - phosphorylation, GO:0000287 - magnesium ion binding, GO:0009651 - response to salt stress, GO:0006529 - asparagine biosynthetic process, GO:0010150 - leaf senescence, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0016740 - transferase activity, GO:0008610 - lipid biosynthetic process, GO:0009416 - response to light stimulus, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016301 - kinase activity","TO:0000249 - leaf senescence, TO:0000104 - floury endosperm, TO:0006001 - salt tolerance, TO:0000075 - light sensitivity","PO:0005360 - aleurone layer , PO:0009005 - root , PO:0009089 - endosperm , PO:0020039 - leaf lamina , PO:0001054 - 4 leaf senescence stage , PO:0020104 - leaf sheath , PO:0020110 - scutellum , PO:0007022 - seed imbibition stage ","Os05g0405000","LOC_Os05g33570.2, LOC_Os05g33570.1",null,"Os04g0611800","Os01g0848400","Os06g0649800",0,2.2182589,null,"MADS18","OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28","MADS BOX GENE 18","MADS box gene18, MADS-box transcription factor 18, MADS-box protein 2, MADS-box protein 28",7," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048830 - adventitious root development, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0005515 - protein binding, GO:0045449 - regulation of transcription, GO:0010029 - regulation of seed germination, GO:0043565 - sequence-specific DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0030154 - cell differentiation, GO:0010093 - specification of floral organ identity, GO:0009908 - flower development, GO:0005886 - plasma membrane","TO:0002616 - flowering time, TO:0000430 - germination rate, TO:0000266 - chalky endosperm, TO:0000207 - plant height, TO:0000622 - flower development trait, TO:0000576 - stem length, TO:0000615 - abscisic acid sensitivity, TO:0006032 - panicle size, TO:0000180 - spikelet fertility, TO:0000145 - internode length, TO:0000346 - tiller number","PO:0000042 - shoot-borne root , PO:0006215 - leaf aerenchyma , PO:0009082 - spikelet floret , PO:0000229 - flower meristem , PO:0009001 - fruit , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0007057 - 0 seed germination stage , PO:0007615 - flower development stage ","Os07g0605200","LOC_Os07g41370.2, LOC_Os07g41370.1","Os06g0712700","Os05g0285900","Os12g0138500",6.4889946,0,null,"SDRB","Sdrb, Sdub, Sdr7","SEED DORMANCY B","Seed dormancy-b, Seed dormancy-7",null," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",null,null,"Os02g0244700","Os02g0244700","Os08g0115200",1.2290587,1.5523863,null,"PI15","Pi15(t), Pi15, RMg34.","PYRICULARIA ORYZAE RESISTANCE 15","Pyricularia oryzae resistance 15, Magnaporthe grisea resistance-15, Blast resistance 15",9," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000490 - protein composition related trait, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os09g0459200","Os11g0113700","Os06g0561000",1.6449728,4.2721057,null,"qHID-7-1(t) (qHID1-1)","qHID-7-1(t) (qHID1-1)","harvest index (QTL)-7-1(t)","harvest index (QTL)-7-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0174000","Os09g0459200","Os05g0129000",2.0921073,1.2048731]
[{"$nulls":6},"Os10g0567000","LOC_Os10g41749",-1.4640685,"Os03g0711100","LOC_Os03g50310","CO-like",2.263133,{"$nulls":10},"Os03g0112900","Os10g0580400","Os08g0473900","Os08g0473900",3.8398027,3.305474,null,"Os04g0408600",7.2028546,"Os07g0489200",-2.356139,{"$nulls":5},"Os01g0600900",4.0118365,3.538292,{"$nulls":9},"Os01g0749300",-1.0989451,-1.2446251,{"$nulls":9},"BRD2","brd2, OsBRD2, Dim/dwf1, Dim, dwf1, OsDWF1, DWF1, LTBSG1, OsLTBSG1, LHDD10, OsLHDD10, OsD-LDH3, D-LDH3","BRASSINOSTEROID DEFICIENT DWARF 2","brassinosteroid (BR)-deficient dwarf-2, BR-deficient dwarf2, brassinosteroid-deficient dwarf2, rice homolog of Arabidopsis thaliana DIMINUTO/DWARF1, Dim/dwf1 protein, DIMINUTO, DWARF1, Putative Cell elongation protein DIMINUTO, Cell elongation protein Dwarf1, Dimunito/Dwarf1, longer top branch and shorter grain 1, D-lactate dehydrogenase 3",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010154 - fruit development, GO:0005783 - endoplasmic reticulum, GO:0009834 - secondary cell wall biogenesis, GO:0048767 - root hair elongation, GO:0010075 - regulation of meristem growth, GO:0000272 - polysaccharide catabolic process, GO:0000271 - polysaccharide biosynthetic process, GO:0009664 - plant-type cell wall organization, GO:0005634 - nucleus, GO:0009932 - cell tip growth, GO:0010229 - inflorescence development, GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development, GO:0005982 - starch metabolic process, GO:0016126 - sterol biosynthetic process, GO:0009507 - chloroplast, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0048587 - regulation of short-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0016132 - brassinosteroid biosynthetic process, GO:0043481 - anthocyanin accumulation in tissues in response to UV light, GO:0048653 - anther development, GO:0050614 - delta24-sterol reductase activity, GO:0050660 - FAD binding, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0006084 - acetyl-CoA metabolic process, GO:0009808 - lignin metabolic process, GO:0009825 - multidimensional cell growth, GO:0019344 - cysteine biosynthetic process","TO:0000734 - grain length, TO:0002688 - leaf lamina joint bending, TO:0000326 - leaf color, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000495 - chlorophyll content, TO:0000382 - 1000-seed weight, TO:0000357 - growth and development trait, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0001002 - fruit development stage , PO:0000037 - shoot apex ","Os10g0397400","LOC_Os10g25780.3, LOC_Os10g25780.2, LOC_Os10g25780.1","LOC_Os02g47970.1","Os01g0670800","Os02g0187800","Os01g0680200",0,2.1909852,null,"MADS20","OsMADS20","MADS BOX GENE 20","MADS box gene20, MADS-box transcription factor 20",12," Reproductive organ - panicle,  Other","GO:0043565 - sequence-specific DNA binding, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os12g0501700","LOC_Os12g31748.1, LOC_Os12g31748.2","Os01g0668100","Os03g0157300","Os02g0753500",4.4211354,0,null,"SG","Sg","PERMEABILITY OF TESTA TO WATER","Permeability of testa to water",null," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",null,null,"Os01g0114300","Os01g0114300","Os03g0232600",0,1.5340596,null,"PI3","Pi3, Pi5, Pi-3(t), Pi-3, Pi3(t), Pi5(t), Pi5-1, Pii, RMg22, RMg21","PYRICULARIA ORYZAE RESISTANCE 3","Pyricularia oryzae resistance 3, Magnaporthe grisea resistance-3, Blast resistance 3",9," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0009620 - response to fungus, GO:0043531 - ADP binding","TO:0000074 - blast disease, TO:0000477 - panicle blast disease resistance, TO:0000500 - leaf blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000502 - potassium chlorate resistance","PO:0009025 - vascular leaf ","Os09g0327575/Os09g0327600","LOC_Os09g15840.1","Os02g0301100","Os11g0610900","Os04g0659100",0,4.2717166,null,"qHID-8-1(t) (qHID1-1)","qHID-8-1(t) (qHID1-1)","harvest index (QTL)-8-1(t)","harvest index (QTL)-8-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0637800","Os02g0301100","Os07g0247100",0,1.180143]
[{"$nulls":6},"Os02g0132500","LOC_Os02g03960",-1.4448551,"Os06g0264200","LOC_Os06g15330","CO-like",2.6492913,null,"Gramene PlantReactome",{"$nulls":8},"Os03g0140100","Os04g0599000","Os03g0725200","Os03g0725200",3.7773674,-2.226667,null,"Os10g0467800",7.1616282,"Os01g0949750",-2.3416748,{"$nulls":5},"Os05g0382600",1.9584646,2.7545216,{"$nulls":9},"Os01g0274800",0,-0.993018,{"$nulls":9},"CPT1","cpt1","COLEOPTILE PHOTOTROPISM 1","coleoptile phototropism1, Coleoptile phototropism protein 1, Non-phototropic hypocotyl 3-like protein, NPH3-like protein, NPH3-like",2," Vegetative organ - Leaf","GO:0005515 - protein binding, GO:0004871 - signal transducer activity, GO:0009416 - response to light stimulus, GO:0009638 - phototropism","TO:0002650 - phototropism, TO:0000159 - blue light sensitivity, TO:0002652 - root phototropism, TO:0000075 - light sensitivity, TO:0002651 - shoot phototropism, TO:0000158 - red light sensitivity","PO:0009005 - root , PO:0020033 - coleoptile ","Os02g0568200","LOC_Os02g35970.1",null,"Os05g0567300","Os04g0613000","Os12g0263000",2.0778656,2.1643085,null,"MADS21","OsMADS21, RMADS207","MADS BOX GENE 21","MADS box gene21, MADS-box transcription factor 21",1," Reproductive organ - panicle,  Other","GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0886200","LOC_Os01g66290.1, LOC_Os01g66290.2","Os09g0104200","Os03g0294700","Os01g0127200",3.924364,0,null,"SPO1","spo1*, shp1, spt1","SHOOT POSITION 1","shoot position1, shoot position 1, shoot position-1",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0020031 - radicle , PO:0020144 - apical meristem ",null,null,"Os02g0115900","Os02g0115900","Os03g0826500",0,1.5269942,null,"PI67","Pi67(t)*, Pi67, Pi67(t)","PYRICULARIA ORYZAE RESISTANCE 67","Pyricularia oryzae resistance from Tsuyuake, Magnaporthe grisea resistance from Tsuyuake, Magnaporthe grisea resistance-67, Blast resistance 67",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000478 - abscisic acid concentration, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os07g0471900","Os07g0424400","Os04g0166000",0,4.2714596,null,"qHID-8-2(t) (qHID1-1)","qHID-8-2(t) (qHID1-1)","harvest index (QTL)-8-2(t)","harvest index (QTL)-8-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0831500","Os07g0471900","Os01g0633100",1.5410696,1.1146822]
[{"$nulls":6},"Os03g0820400","LOC_Os03g60570",-1.4386396,"Os06g0275000","LOC_Os06g16370","CO-like",-1.0695515,null,"Os06g0474800",{"$nulls":8},"Os04g0469800","Os03g0341000","Os05g0163300","Os05g0163300",3.7323112,3.399143,null,"Os04g0552300",7.1036925,"Os06g0522300",-2.3303158,{"$nulls":5},"Os08g0532200",1.8331337,1.8685623,{"$nulls":9},"Os01g0757500",0,-1.2921511,{"$nulls":9},"ABA1","OsABA1, Zep1, OsAba1, Aba2, OsAba2, OsZep1, Zep, OsZep, Aba1, OsABA2, Osaba1, OsZEP-1, OsZEP, OSZEP1, ZEP1, ZEP","ABA DEFICIENT 1","Zeaxanthin epoxidase 1, zeaxanthin epoxidase, abscisic acid-deficient 1",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Coloration,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004497 - monooxygenase activity, GO:0009688 - abscisic acid biosynthetic process, GO:0051607 - defense response to virus, GO:0042742 - defense response to bacterium, GO:0016491 - oxidoreductase activity, GO:0007623 - circadian rhythm, GO:0022900 - electron transport chain, GO:0006725 - cellular aromatic compound metabolic process, GO:0009738 - abscisic acid mediated signaling, GO:0009408 - response to heat, GO:0009266 - response to temperature stimulus, GO:0009540 - zeaxanthin epoxidase activity, GO:0009536 - plastid, GO:0008152 - metabolic process, GO:0010378 - temperature compensation of the circadian clock, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0016123 - xanthophyll biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010118 - stomatal movement","TO:0000135 - leaf length, TO:0000203 - bacterial leaf streak disease resistance, TO:0000522 - stomatal conductance, TO:0000148 - viral disease resistance, TO:0002667 - abscisic acid content, TO:0000131 - leaf water potential, TO:0000326 - leaf color, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait, TO:0000020 - black streak dwarf virus resistance, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000478 - abscisic acid concentration, TO:0000175 - bacterial blight disease resistance, TO:0000619 - vivipary","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os04g0448900","LOC_Os04g37619.1, LOC_Os04g37619.2","LOC_Os10g26340.1","Os02g0125700","Os05g0373300","Os11g0544800",2.3657959,2.1625051,null,"MADS22","OsMADS22, RMD1, DLN68, OsDLN68","MADS BOX GENE 22","MADS box gene22, MADS-box transcription factor 22, STMADS11-like, DLN repressor 68, DLN motif protein 68",2," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0007275 - multicellular organismal development, GO:0003677 - DNA binding, GO:0006350 - transcription","TO:0000485 - sterility related trait, TO:0000621 - inflorescence development trait, TO:0001000 - glume cover, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000670 - floret number","PO:0004705 - stamen primordium , PO:0006004 - upper glume , PO:0009082 - spikelet floret , PO:0009009 - plant embryo , PO:0009036 - lodicule , PO:0009037 - lemma , PO:0009038 - palea , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem ","Os02g0761000","LOC_Os02g52340.1","Os03g0786400","Os03g0109400","Os11g0233800",3.7926943,0,null,"SK1","Sk1, Fgr","SCENTED KERNEL 1","Scented kernel1, Scented kernel 1, Scented kernel-1",null," Seed - Physiological traits - Taste","GO:0009698 - phenylpropanoid metabolic process","TO:0000087 - aroma","PO:0000003 - whole plant , PO:0009010 - seed , PO:0009011 - plant structure ",null,null,"Os04g0573900","Os04g0573900","Os10g0564500",1.8656765,1.4809216,null,"PIB1","Pib1*, pib1*t, Pib1","PYRICULARIA ORYZAE RESISTANCE B 1","Pyricularia oryzae resistance from Lemont, Magnaporthe grisea resistance from Lemont, Magnaporthe grisea resistance-b1",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000472 - vascular bundle number, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os02g0494000","Os08g0189200","Os05g0555100",0,4.233563,null,"qNOP-12-1(t) (qNOP1-1)","qNOP-12-1(t) (qNOP1-1)","number of panicles per plant (QTL)-12-1(t)","number of panicles per plant (QTL)-12-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0680200","Os02g0494000","Os06g0498400",1.4988832,1.0321459]
[{"$nulls":6},"Os05g0450300","LOC_Os05g37780",-1.4306365,"Os08g0536300","LOC_Os08g42440","CO-like",1.903288,null,"Os11g0668300",{"$nulls":8},"Os06g0102100","Os02g0169300","Os04g0223300","Os04g0223300",3.6837552,4.304131,null,"Os04g0337500",7.0970664,"Os07g0663000",-2.297181,{"$nulls":5},"Os12g0541300",5.8683686,2.361488,{"$nulls":9},"Os02g0643800",0,-0.9625449,{"$nulls":9},"CUC3","OsCUC3, ONAC107, NAC107, DLN214, OsDLN214","CUP-SHAPED COTYLEDON 3","cup-shaped cotyledon 3, NAC domain-containing protein 107, CUP-SHAPED COTYLEDON3, DLN repressor 214, DLN motif protein 214",8," Vegetative organ - Leaf,  Seed - Morphological traits - Embryo,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045449 - regulation of transcription, GO:0009790 - embryonic development, GO:0048508 - embryonic meristem development, GO:0003677 - DNA binding, GO:0048366 - leaf development, GO:0009791 - post-embryonic development, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0010492 - maintenance of shoot apical meristem identity","TO:0006020 - shoot apical meristem development, TO:0000225 - stamen number, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0020103 - flag leaf , PO:0009055 - bract , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0009005 - root , PO:0025034 - leaf , PO:0020148 - shoot apical meristem , PO:0009009 - plant embryo ","Os08g0511200","LOC_Os08g40030.1",null,"Os06g0703500","Os07g0129700","Os03g0337600",0,2.157176,null,"MADS26","OsMADS26, FDRMADS3, RMADS220","MADS BOX GENE 26","MADS box gene26, MADS-box transcription factor 26",8," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage ","Os08g0112700","LOC_Os08g02070.1","Os05g0145400","Os07g0603700","Os02g0781900",3.770461,0,null,"TH","Th","HARD THRESHABILITY","Hard threshability",null," Seed - Physiological traits - Shattering","GO:0009838 - abscission","TO:0000406 - panicle threshability","PO:0009049 - inflorescence ",null,null,"Os06g0133000","Os06g0133000","Os09g0442100",2.6503267,1.4673223,null,"PIB2","Pib2*, Pilm2, Pib2","PYRICULARIA ORYZAE RESISTANCE B 2","Pyricularia oryzae resistance from Lemont, Magnaporthe grisea resistance from Lemont, Magnaporthe grisea resistance-b2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000473 - grain shattering","PO:0009025 - vascular leaf ",null,null,"Os06g0194900","Os03g0725200","Os03g0736500",2.4215477,4.2236824,null,"qNOP-12-2(t) (qNOP1-1)","qNOP-12-2(t) (qNOP1-1)","number of panicles per plant (QTL)-12-2(t)","number of panicles per plant (QTL)-12-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0229400","Os06g0194900","Os03g0123300",2.6666102,1.0072118]
[{"$nulls":6},"Os09g0369500","LOC_Os09g20400",-1.4270524,"Os05g0204600","LOC_Os05g11510","DBB",1.7392745,null,"Os01g0246700",{"$nulls":8},"Os06g0294600","Os05g0134000","Os08g0161800","Os08g0161800",3.6773403,1.4910184,null,"Os06g0141600",7.0655046,"Os02g0606600",-2.2836583,{"$nulls":5},"Os01g0883800",-2.0003462,1.0044001,{"$nulls":9},"Os01g0720400",0,-1.3515873,{"$nulls":9},"EIL1","OsEIL1, EIN3, OsEIN3, MHZ6, OsEIL1a, EIL1a","ETHYLENE INSENSITIVE-LIKE GENE 1","EIN3-like protein 1, ethylene-insensitive 3, ETHYLENE INSENSITIVE3-LIKE 1, EIN3-LIKE 1, EIN3-like 1",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0010150 - leaf senescence, GO:0003677 - DNA binding, GO:0042742 - defense response to bacterium, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009873 - ethylene mediated signaling pathway, GO:0003700 - transcription factor activity, GO:0010601 - positive regulation of auxin biosynthetic process, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus","TO:0000043 - root anatomy and morphology trait, TO:0000173 - ethylene sensitivity, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000620 - embryo development trait, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0001031 - 4 root elongation stage ","Os03g0324200","LOC_Os03g20780.1",null,"Os01g0233000","Os01g0357100","Os06g0107700",0,2.1411397,null,"FST ","OsMADS29, MADS29, OsFST","FEMALE-STERILE ","MADS box gene29, MADS-box transcription factor 29",2," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity,  Other","GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0010600 - regulation of auxin biosynthetic process, GO:0010252 - auxin homeostasis, GO:0009960 - endosperm development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0048481 - ovule development, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009755 - hormone-mediated signaling, GO:0009790 - embryonic development","TO:0000620 - embryo development trait, TO:0000358 - female sterility, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0002672 - auxin content, TO:0000476 - growth hormone content, TO:0000163 - auxin sensitivity, TO:0000621 - inflorescence development trait","PO:0001002 - fruit development stage , PO:0007619 - ovule development stage , PO:0007633 - endosperm development stage , PO:0007631 - plant embryo stage , PO:0001083 - inflorescence development stage ","Os02g0170300","LOC_Os02g07430.1","Os03g0637800","Os04g0563900","Os08g0562500",3.7348995,0,null,"VEP1","vep1*, vep1","VARIABLE EMBRYO PHENOTYPES 1","variable embryo phenotypes1, variable embryo phenotypes 1, variable embryo phenotypes-1",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os10g0562100","Os10g0562100","Os03g0238600",0,1.3971219,null,"PIQ1","Piq1*, Pitq1*, Pitq1, Pi-tq1, Pitq-1","PYRICULARIA ORYZAE RESISTANCE Q 1","Pyricularia oryzae resistance from Teqing, Magnaporthe grisea resistance from Teqing, Magnaporthe grisea resistance-tq1, Blast resistance tq1",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000474 - glume opening, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os01g0507000","Os10g0163040","Os04g0574200",0,4.2212663,null,"qNOP-3-1(t) (qNOP1-1)","qNOP-3-1(t) (qNOP1-1)","number of panicles per plant (QTL)-3-1(t)","number of panicles per plant (QTL)-3-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os04g0234600","Os01g0507000","Os03g0170900",0,0.96311694]
[{"$nulls":6},"Os11g0705200","LOC_Os11g47870",-1.414639,"Os06g0713000","LOC_Os06g49880","DBB",1.7561938,null,"Os03g0782500",{"$nulls":8},"Os06g0640800","Os09g0452900","Os03g0679700","Os03g0679700",3.6519744,3.4125168,null,"Os11g0644700",6.9840145,"Os03g0574900",-2.2830698,{"$nulls":5},"Os11g0610900",3.794843,2.055989,{"$nulls":9},"Os03g0132900",0,-1.4874182,{"$nulls":9},"EXPB4","OsEXPB4, OsaEXPb1.7, EXPb1.7","BETA-EXPANSIN 4","Expansin-B4, Beta-expansin-4",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0005576 - extracellular region, GO:0019898 - extrinsic to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0007047 - cell wall organization, GO:0005618 - cell wall, GO:0019953 - sexual reproduction","TO:0000207 - plant height, TO:0000085 - leaf rolling",null,"Os10g0556100","LOC_Os10g40730.1",null,"Os01g0195000","Os01g0883900","Os10g0567400",0,2.1365983,null,"CFO1","OsMADS32, MADS32, OsCFO1, CFO1/OsMADS32, TRI1, OsTRI1, OsMADS32/CFO, CFO, OsCFO","CHIMERIC FLORAL ORGANS 1","MADS box gene32, MADS-box transcription factor 32, triangular hull 1",1," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003700 - transcription factor activity, GO:0010093 - specification of floral organ identity, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0010229 - inflorescence development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0006012 - carpel anatomy and morphology trait, TO:0002629 - fruit structure trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0726400","LOC_Os01g52680.1","Os03g0818800","Os11g0289700","Os06g0232300",3.368972,0,null,"VEP2","vep2*, vep2","VARIABLE EMBRYO PHENOTYPES 2","variable embryo phenotypes2, variable embryo phenotypes 2, variable embryo phenotypes-2",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",null,null,"Os10g0573900","Os10g0573900","Os05g0405000",0,1.3920685,null,"PIQ2","Piq2*, Pitq2*, Pitq2","PYRICULARIA ORYZAE RESISTANCE Q 2","Pyricularia oryzae resistance from Teqing, Magnaporthe grisea resistance from Teqing, Magnaporthe grisea resistance-tq2, Blast resistance tq2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000475 - adventitious root thickness, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os03g0858800","Os09g0361500","Os07g0586200",4.5226154,4.156663,null,"qNOP-4-1(t) (qNOP1-1)","qNOP-4-1(t) (qNOP1-1)","number of panicles per plant (QTL)-4-1(t)","number of panicles per plant (QTL)-4-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0140100","Os03g0858800","Os04g0271700",4.4586425,0]
[{"$nulls":6},"Os02g0558700","LOC_Os02g35240",-1.4129696,"Os02g0673700","LOC_Os02g45200","Dof",-1.2354975,null,"Os07g0686600",{"$nulls":8},"Os06g0641800","Os04g0602300","Os03g0861100","Os03g0861100",3.5939598,1.8487477,null,"Os09g0248100",6.9785237,"Os08g0355400",-2.2830312,{"$nulls":5},"Os01g0750300",6.3130035,5.462513,{"$nulls":9},"Os03g0792500",-1.4623181,-1.0055532,{"$nulls":9},"OSH69","Osh69","LEAF SENESCENCE","alkaline alpha-galactosidase",null," Vegetative organ - Leaf","GO:0047274 - galactinol-sucrose galactosyltransferase activity",{"$nulls":5},"Os03g0826600","Os09g0570800","Os07g0558500",0,2.1247575,null,"PAP2","MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2, PAP2/OsMADS34, OsMADS34/PAP2, OsMADS19","PANICLE PHYTOMER2","MADS box gene34, MADS-box transcription factor 34, panicle phytomer 2",3," Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0010228 - vegetative to reproductive phase transition, GO:0043565 - sequence-specific DNA binding, GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003006 - reproductive developmental process","TO:0000358 - female sterility, TO:0002759 - grain number, TO:0000621 - inflorescence development trait, TO:0002726 - sterile lemma shape, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os03g0753100","LOC_Os03g54170.1","Os04g0683700","Os02g0494400","Os05g0589700",3.202921,0,null,"VEP3","vep3*, vep3","VARIABLE EMBRYO PHENOTYPES 3","variable embryo phenotypes3, variable embryo phenotypes 3, variable embryo phenotypes-3",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0020031 - radicle ",null,null,"Os03g0643300","Os03g0643300","Os03g0308200",0,1.3246378,null,"PIQ3","Piq3*, Pitq3*, Pitq3","PYRICULARIA ORYZAE RESISTANCE Q 3","Pyricularia oryzae resistance from Teqing, Magnaporthe grisea resistance from Teqing, Magnaporthe grisea resistance-tq3, Blast resistance tq3",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000476 - growth hormone content, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os09g0529300","Os10g0552700","Os07g0156200",3.268673,4.1536126,null,"qNOP-4-2(t) (qNOP1-1)","qNOP-4-2(t) (qNOP1-1)","number of panicles per plant (QTL)-4-2(t)","number of panicles per plant (QTL)-4-2(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0134200","Os09g0529300","Os06g0677000",4.399954,0]
[{"$nulls":6},"Os12g0233800","LOC_Os12g13170",-1.4053911,"Os02g0726300","LOC_Os02g49440","Dof",3.431485,null,"Os01g0190300",{"$nulls":8},"Os07g0517900","Os11g0490900","Os05g0555600","Os05g0555600",3.5486362,-2.5385206,null,"Os06g0589500",6.838103,"Os08g0529100",-2.2647016,{"$nulls":5},"Os05g0349700",2.3802779,2.0641327,{"$nulls":9},"Os10g0562100",-2.144032,-1.7148021,{"$nulls":9},"SGD2","HOX3, Oshox3, OsHox3","SMALL GRAIN AND DWARF 2","rice homeobox gene 3, Homeobox-leucine zipper protein HOX3, Homeodomain transcription factor HOX3, HD-ZIP protein HOX3, Small Grain and Dwarf 2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0030371 - translation repressor activity, GO:0016049 - cell growth, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0002675 - gibberellic acid content, TO:0002689 - leaf sheath length, TO:0000207 - plant height, TO:0000241 - leaf number, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000346 - tiller number, TO:0006020 - shoot apical meristem development, TO:0000734 - grain length","PO:0009005 - root , PO:0020141 - stem node , PO:0025395 - floral organ ","Os01g0643600","LOC_Os01g45570.1",null,"Os02g0573200","Os05g0159300","Os04g0469800",0,2.068486,null,"MADS47","OsMADS47, OsMDP1, MDP, MDP1","MADS BOX GENE 47","MADS box gene47, MADS-domain-contaiing protein1, MADS-domain-containing protein 1, MADS-box transcription factor 47, MADS-DOMAIN-CONTAIING PROTEIN1, MADS domain protein 1",3," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding","TO:0006022 - floral organ development trait, TO:0000206 - leaf angle, TO:0000401 - plant growth hormone sensitivity, TO:0000227 - root length, TO:0000621 - inflorescence development trait, TO:0000240 - sterile lemma length","PO:0003003 - obsolete primary root elongation zone , PO:0006012 - leaf collar , PO:0009005 - root , PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020033 - coleoptile , PO:0020142 - stem internode , PO:0001083 - inflorescence development stage ","Os03g0186600","LOC_Os03g08754.2, LOC_Os03g08754.1","Os06g0187200","Os06g0163000","Os02g0450000",3.1121986,0,null,"D2","d2, dwf2, CYP90D2, D2/CYP90D2, OsD2, SMG11, OsSMG11, D2/SMG11","DWARF EBISU","ebisu dwarf, dwarf-2, cytochrome P450 CYP90D2, Ebisu dwarf/Dwarf2, Dwarf2, SMALL GRAIN 11",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0016132 - brassinosteroid biosynthetic process, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007275 - multicellular organismal development, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009753 - response to jasmonic acid stimulus, GO:0016021 - integral to membrane, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000391 - seed size, TO:0000262 - panicle shape, TO:0000040 - panicle length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000567 - tiller angle, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000299 - leaf lamina color, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000132 - basal internode diameter",null,"Os01g0197100","LOC_Os01g10040.1, LOC_Os01g10040.2","Os04g0652400","Os04g0652400","Os04g0127800",0,1.31775,null,"PIQ4","Piq4*, Pitq4*, Pitq4","PYRICULARIA ORYZAE RESISTANCE Q 4","Pyricularia oryzae resistance from Teqing, Magnaporthe grisea resistance from Teqing, Magnaporthe grisea resistance-tq4, Blast resistance tq4",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os08g0155400","Os01g0905800","Os01g0293900",3.268673,4.1536126,null,"qPPL-11-1(t) (ppl12.1)","qPPL-11-1(t) (ppl12.1)","panicles per plant (QTL)-11-1(t)","panicles per plant (QTL)-11-1(t)",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0220400","Os08g0155400","Os04g0460600",4.1927667,0]
[{"$nulls":6},"Os01g0952900","LOC_Os01g72360",-1.4009453,"Os03g0764900","LOC_Os03g55610","Dof",-2.1698039,null,"Os01g0753500",{"$nulls":8},"Os08g0105800","Os05g0567900","Os10g0111700","Os10g0111700",3.3918743,5.1882243,null,"Os11g0141900",6.828964,"Os06g0133000",-2.2645013,{"$nulls":5},"Os01g0866400",-3.1494305,2.356459,{"$nulls":9},"Os01g0778100",0,-1.671371,{"$nulls":9},"OSKN2","OsKn2, OsH71, HOS9, OSH71, OSH71/Oskn2","KNOX PROTEIN 2","KNOX protein 2, Oryza sativa homeobox71, Homeobox protein knotted-1-like 10, Homeobox protein OSH71, Homeobox protein HOS9, Homeobox protein knotted-1-like 2, Rice KNOX gene-71",5," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0030912 - response to deep water","TO:0000492 - leaf shape, TO:0000207 - plant height, TO:0002616 - flowering time, TO:0000524 - submergence tolerance","PO:0009025 - vascular leaf ","Os05g0129700","LOC_Os05g03884.1","LOC_Os09g36200.1","Os04g0484900","Os09g0459200","Os05g0349700",2.3802779,2.0641327,null,"MADS50","OsMADS50, AGL20, SOC1, OsSOC1, RMADS208, OsSOC1/ OsMADS50/DTH3, DTH3, OsDTH3","MADS BOX GENE 50","MADS box gene50, MADS-box transcription factor 50, Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like, Protein AGAMOUS-like 20",3," Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003700 - transcription factor activity, GO:0010208 - pollen wall assembly, GO:0030154 - cell differentiation, GO:0009908 - flower development, GO:0009266 - response to temperature stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0048653 - anther development, GO:0003677 - DNA binding, GO:0009555 - pollen development, GO:0048364 - root development, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0006350 - transcription","TO:0000432 - temperature response trait, TO:0000437 - male sterility, TO:0002685 - crown root number, TO:0000621 - inflorescence development trait, TO:0000656 - root development trait","PO:0001083 - inflorescence development stage , PO:0007520 - root development stage , PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os03g0122600","LOC_Os03g03100.1, LOC_Os03g03070.1","Os02g0594800","Os07g0563300","Os01g0659900",3.0577822,0,null,"GLU1","Glu1(Srp1, Gt2), Srp, Gt2, Glu1","GLUTELIN 1","Rice glutelin1, Rice glutelin 1, Rice glutelin-1",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os03g0764900","Os03g0764900","Os01g0788800",0,1.2033843,null,"PRS","prs","PROPANIL SUSCEPTIBILITY","propanil susceptibility",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000058 - herbicide sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os03g0445700","Os01g0846500","Os03g0333400",0,4.14127,null,"qTP-1 (tp7b)","qTP-1 (tp7b)","tillers per plant (QTL)-7-2","tillers per plant (QTL)-7-2",null," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0189100","Os03g0445700","Os01g0127200",3.924364,0]
[{"$nulls":6},"Os03g0314400","LOC_Os03g19980",-1.3869253,"Os04g0567800","LOC_Os04g47990","Dof",-1.2354975,null,"Os01g0176000",{"$nulls":8},"Os08g0106000","Os04g0665600","Os08g0489300","Os08g0489300",3.2568026,6.915251,null,"Os03g0365800",6.747145,"Os12g0198200",-2.2590168,{"$nulls":5},"Os03g0315800",2.8938558,2.555285,{"$nulls":9},"Os06g0159900",0,-1.2050422,{"$nulls":9},"NAC2","OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2, DLN113, OsDLN113","NAC DOMAIN-CONTAINING PROTEIN 2","NAC domain-containing protein 004, NAC domain-containing protein 4, NAC domain-containing protein 34, NAC domain-containing protein 58, miR164-targeted NAC2, Oryza miR164-targeted NAC2, Oryza sativa tillering1, ORESARA 1.2, DLN repressor 113, DLN motif protein 113",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination,  Other","GO:0006970 - response to osmotic stress, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009740 - gibberellic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0006350 - transcription, GO:0010150 - leaf senescence, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010187 - negative regulation of seed germination, GO:0010029 - regulation of seed germination, GO:0010942 - positive regulation of cell death, GO:0080036 - regulation of cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance, TO:0000017 - anatomy and morphology related trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0002768 - spikelet length, TO:0000656 - root development trait, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000227 - root length, TO:0000567 - tiller angle, TO:0002685 - crown root number, TO:0002660 - cytokinin content, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000145 - internode length, TO:0000095 - osmotic response sensitivity, TO:0000396 - grain yield, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000450 - grain yield per panicle","PO:0007045 - coleoptile emergence stage , PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage , PO:0000025 - root tip , PO:0000043 - crown root , PO:0005029 - root primordium , PO:0020121 - lateral root ","Os04g0460600","LOC_Os04g38720.1",null,"Os08g0503800","Os03g0122300","Os11g0610900",3.794843,2.055989,null,"MADS55","OsMADS55, DLN163, OsDLN163","MADS BOX GENE 55","MADS box gene55, MADS-box transcription factor 55, DLN repressor 163, DLN motif protein 163",6," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os06g0217300","LOC_Os06g11330.1","Os04g0470600","Os11g0533500","Os01g0726400",3.0321162,0,null,"GLU1","Glu1t*(Glu1), Glu1t*, Glu1t, Glu1, Glu12","GLUTELIN 1","Glutelin subunit1, Glutelin subunit 1, Glutelin subunit-1, Rice glutelin-12",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os04g0537900","Os08g0473600","Os08g0424500",0,1.1904254,null,"R5MT","R5MT*","RESISTANCE TO 5METHYLTRYPTOPHAN","Resistance to 5methyltryptophan, Resistance to 5 methyltryptophan",null," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000482 - chemical stress sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os02g0763000","Os05g0555600","Os12g0291100",0,4.041716,null,"qNFP-2-1(t)","qNFP-2-1(t)","Number of florets per panicle (QTL)-2-1(t)","Number of florets per panicle (QTL)-2-1(t)",2," Character as QTL - Yield and productivity",{"$nulls":5},"Os07g0247100","Os02g0763000","Os05g0554400",3.8717346,0]
[{"$nulls":6},"Os05g0548900","LOC_Os05g47540",-1.3847553,"Os01g0165000","LOC_Os01g07120","ERF",-0.9488856,null,"Os01g0176200",{"$nulls":8},"Os08g0106300","Os02g0806300","Os02g0733300","Os02g0733300",3.2091076,1.841709,null,"Os01g0946600",6.706499,"Os11g0210500",-2.2529678,{"$nulls":5},"Os09g0422500",3.34322,1.567009,{"$nulls":9},"Os04g0567800",1.6114241,-1.2354975,{"$nulls":9},"NAM","OsNAM, OMTN5, ONAC092, ONAC92, NAC92, CUC2, OsNAM/CUC2, DLN165, OsDLN165, OsCUC1, CUC1, OsNAM/ OMTN5, OsNAM1, NAM1","NO APICAL MERISTEM","no apical meristem, Petunia NO APICAL MERISTEM ortholog, miR164-targeted NAC5, Oryza miR164-targeted NAC5, NAC domain-containing protein 092, NAC domain-containing protein 92, DLN repressor 165, DLN motif protein 165, CUP-SHAPED COTYLEDON 1",6," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048497 - maintenance of floral organ identity, GO:0048508 - embryonic meristem development, GO:0010492 - maintenance of shoot apical meristem identity, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0048437 - floral organ development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0009791 - post-embryonic development, GO:0010093 - specification of floral organ identity, GO:0045449 - regulation of transcription, GO:0048507 - meristem development, GO:0009790 - embryonic development, GO:0003677 - DNA binding, GO:0010450 - inflorescence meristem growth, GO:0005634 - nucleus","TO:0000655 - leaf development trait, TO:0000050 - inflorescence branching, TO:0020034 - glume width, TO:0000215 - stamen anatomy and morphology trait, TO:0006022 - floral organ development trait, TO:0000437 - male sterility, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000670 - floret number, TO:0000040 - panicle length, TO:0006019 - floral organ identity, TO:0000547 - primary branch number, TO:0000225 - stamen number, TO:0006038 - floral organ number, TO:0000557 - secondary branch number, TO:0006020 - shoot apical meristem development, TO:0000274 - floret anatomy and morphology trait, TO:0000145 - internode length, TO:0000621 - inflorescence development trait, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0006016 - meristem tissue development trait, TO:0006010 - lodicule number, TO:0002689 - leaf sheath length, TO:0006032 - panicle size","PO:0005020 - vascular bundle , PO:0009005 - root , PO:0020148 - shoot apical meristem , PO:0025034 - leaf , PO:0009055 - bract , PO:0020103 - flag leaf , PO:0009029 - stamen , PO:0025082 - reproductive shoot system , PO:0009030 - carpel , PO:0009038 - palea , PO:0009037 - lemma , PO:0025585 - floral organ formation stage , PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0020033 - coleoptile , PO:0025142 - leaf tip ","Os06g0344900","LOC_Os06g23650.1",null,"Os03g0669000","Os05g0563400","Os06g0703500",1.0499412,2.0117123,null,"MADS56","OsMADS56, FDRMADS8, RMADS214","MADS BOX GENE 56","MADS box gene56, MADS-box transcription factor 56",10," Reproductive organ - Heading date,  Reproductive organ - panicle,  Other","GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent","TO:0002616 - flowering time, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0536100","LOC_Os10g39130.1, LOC_Os10g39130.2","Os07g0262200","Os02g0696900","Os02g0730000",3.0123825,0,null,"GLU2","Glu2t*(Glu2), Glu2t*, Glu2t, Glu2, Glu13","GLUTELIN 2","Glutelin subunit2, Glutelin subunit 2, Glutelin subunit-2, Rice glutelin-13",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os04g0469800","Os05g0361700","Os01g0231000",1.753673,1.1733681,null,"SB","Sb, TRP1","STEM BORER RESISTANCE","Stem borer resistance",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000454 - stem borer resistance","PO:0000003 - whole plant , PO:0009047 - stem ",null,null,"Os03g0602300","Os02g0640500","Os07g0214900",3.4705398,4.0250535,null,"qNPBP-2-1(t)","qNPBP-2-1(t)","Number of primary branches per panicle (QTL)-2-1(t)","Number of primary branches per panicle (QTL)-2-1(t)",2," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0593500","Os03g0602300","Os08g0562500",3.7348995,0]
[{"$nulls":6},"Os07g0227600","LOC_Os07g12510",-1.3763108,"Os02g0558700","LOC_Os02g35240","ERF",-1.4129696,null,"Os08g0428400",{"$nulls":8},"Os08g0152300","Os06g0667100","Os03g0356300","Os03g0356300",2.9869242,2.9967391,null,"Os01g0388000",6.700653,"Os02g0594232",-2.242687,{"$nulls":5},"Os05g0567300",1.3482547,1.4644338,{"$nulls":9},"Os02g0673700",1.456047,-1.2354975,{"$nulls":9},"PAL1","OsPAL, Pal1*, Pal1, PAL, Pal_1, PalI, PAL2, OsPAL01, PAL01, OSPAL, CP-1, GP-1, OsPAL1, PAL3, OsPAL3","PHENYLALANINE AMMONIA-LYASE 1","phenylalanine ammonia-lyase, phenylalanine ammonia lyase 1, Phe ammonia lyase 1",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0010266 - response to vitamin B1, GO:0009834 - secondary cell wall biogenesis, GO:0042742 - defense response to bacterium, GO:0006559 - L-phenylalanine catabolic process, GO:0048316 - seed development, GO:0005737 - cytoplasm, GO:0016841 - ammonia-lyase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009807 - lignan biosynthetic process, GO:0009809 - lignin biosynthetic process, GO:0009411 - response to UV, GO:0009697 - salicylic acid biosynthetic process, GO:0046688 - response to copper ion, GO:0009718 - anthocyanin biosynthetic process, GO:0016211 - ammonia ligase activity, GO:0009698 - phenylpropanoid metabolic process, GO:0009642 - response to light intensity, GO:0002237 - response to molecule of bacterial origin, GO:0009635 - response to herbicide, GO:0009814 - defense response, incompatible interaction, GO:0002213 - defense response to insect, GO:0009058 - biosynthetic process, GO:0009751 - response to salicylic acid stimulus, GO:0009408 - response to heat","TO:0000731 - lignin content, TO:0000051 - stem strength, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000058 - herbicide sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000326 - leaf color, TO:0000424 - brown planthopper resistance, TO:0000021 - copper sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000460 - light intensity sensitivity, TO:0000733 - lignin biosynthesis trait, TO:0000653 - seed development trait, TO:0000624 - allelopathic effect, TO:0000160 - UV light sensitivity, TO:0000031 - silicon sensitivity","PO:0001170 - seed development stage ","Os02g0626100","LOC_Os02g41630.2",null,"Os06g0275000","Os07g0593000","Os03g0132200",0,2.0098898,null,"GNP1","GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2, OsGA20ox2, OsGA20ox-1, GA20ox1, OsGNP1","GRAIN NUMBER PER PANICLE 1","GIBBERELLIN 20-OXIDASE 1, rice GA 20-oxidase1, GA 20-oxidase1, Gibberellin 20 oxidase 1, Gibberellin C-20 oxidase 1, GA 20-oxidase 1, GA20 oxidase-1, GA 20-oxidase 1, GA20 oxidase, Gibberellin C-20 oxidase, Grain Number per Panicle1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009686 - gibberellin biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0006970 - response to osmotic stress, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0055114 - oxidation reduction, GO:0010336 - gibberellic acid homeostasis","TO:0000397 - grain size, TO:0000291 - carbohydrate content, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000599 - enzyme activity, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000095 - osmotic response sensitivity, TO:0000357 - growth and development trait, TO:0000455 - seed set percent, TO:0000396 - grain yield","PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem ","Os03g0856700","LOC_Os03g63970.1","Os04g0444100","Os10g0188250","Os01g0323100",2.9397247,0,null,"GLU3","glu3(t)*, glu10, LGLU3","GLUTELIN 3","lack of glutelin subunit3, lack of glutelin subunit 3, lack of glutelin subunit-3, rice glutelin-10",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os08g0424500","Os06g0247500","Os02g0716500",0,1.1461989,null,"SC1","Sc1, RRs1","SCLEROTIUM ORYZAE RESISTANCE 1","Sclerotium oryzae resistance1, Sclerotium oryzae resistance 1, Rhizoctonia solani (sheath blight) resistance-1, Sclerotia disease resistance-1",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000323 - stem rot disease resistance, TO:0000255 - sheath blight disease resistance","PO:0020104 - leaf sheath ",null,null,"Os07g0603700","Os07g0214900","Os01g0322700",0,4.014314,null,"qNPBP-4-1(t)","qNPBP-4-1(t)","Number of primary branches per panicle (QTL)-4-1(t)","Number of primary branches per panicle (QTL)-4-1(t)",4," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0152900","Os07g0603700","Os02g0805250",3.5810926,0]
[{"$nulls":6},"Os02g0603600","LOC_Os02g39140",-1.372179,"Os02g0657000","LOC_Os02g43970","ERF",4.613399,null,"Os01g0254100",{"$nulls":8},"Os12g0582000","Os08g0562200","Os02g0269200","Os02g0269200",2.957077,3.0136003,null,"Os10g0109200",6.663895,"Os02g0526400",-2.2417166,{"$nulls":5},"Os03g0123500",4.8892865,3.811927,{"$nulls":9},"Os04g0620700",0,-1.1026945,{"$nulls":9},"ZIP1","OsZIP1","ZINC TRANSPORTER 1","zinc transporter 1, Zrt-Irt-like protein 1, Zinc-regulated transporter 1",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0006829 - zinc ion transport, GO:0010043 - response to zinc ion, GO:0046688 - response to copper ion, GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum, GO:0046583 - cation efflux transmembrane transporter activity, GO:0005385 - zinc ion transmembrane transporter activity",null,"PO:0000036 - leaf vascular system , PO:0005020 - vascular bundle , PO:0009005 - root , PO:0009025 - vascular leaf ","Os01g0972200","LOC_Os01g74110.1",null,"Os08g0250900","Os03g0680800","Os05g0389000",3.2207673,2.0078347,null,"AHA7","OSA7, OsA7, osAHA7, AHA7, PAA-Hwa","H+-ATPASE 7","plasma membrane H+-ATPase 7, PM H+-ATPase 7, plasma membrane H+ P-Type ATPase 7, panicle apical abortion-h",4," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046872 - metal ion binding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0060359 - response to ammonium ion, GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism, GO:0010167 - response to nitrate, GO:0010119 - regulation of stomatal movement, GO:0006754 - ATP biosynthetic process, GO:0016021 - integral to membrane, GO:0005773 - vacuole, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000371 - yield trait","PO:0025034 - leaf , PO:0000025 - root tip ","Os04g0656100","LOC_Os04g56160.1, LOC_Os04g56160.2, LOC_Os04g56160.3","Os07g0102200","Os01g0856500","Os05g0571200",2.9214642,0,null,"GLU3","Glu3t*(Glu3), Glu3t*, Glu3t, Glu3, Glu14","GLUTELIN 3","Glutelin subunit3, Glutelin subunit 3, Glutelin subunit-3, Rice glutelin-14",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os05g0533600","Os04g0460600","Os01g0915600",1.4386014,1.1191101,null,"SC2","Sc2, RRs2","SCLEROTIUM ORYZAE RESISTANCE 2","Sclerotium oryzae resistance2, Sclerotium oryzae resistance 2, Rhizoctonia solani (sheath blight) resistance-2, Sclerotia disease resistance-2",null," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000323 - stem rot disease resistance, TO:0000255 - sheath blight disease resistance","PO:0020104 - leaf sheath ",null,null,"Os02g0494400","Os03g0216700","Os08g0104600",0,3.9559326,null,"qNFPB-9-1(t)","qNFPB-9-1(t)","Number of florets per primary branch (QTL)-9-1(t)","Number of florets per primary branch (QTL)-9-1(t)",9," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0841800","Os02g0494400","Os02g0450000",3.1121986,0]
[{"$nulls":6},"Os04g0665600","LOC_Os04g56990",-1.3667952,"Os03g0183200","LOC_Os03g08490","ERF",-1.6938057,null,"Os11g0490900",{"$nulls":8},"Os12g0582700","Os01g0667000","Os12g0113500","Os12g0113500",2.9253447,2.4671364,null,"Os08g0128000",6.663168,"Os12g0153200",-2.2406476,{"$nulls":17},"Os01g0326300",0,-1.8977785,{"$nulls":9},"PHYB","phyB, PHYB1, OsPHYB, OsphyB, OsYHB, YHB, OsPHYB/OsYHB","PHYTOCHROME B","PhytochromeB, Phytochrome B",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0042744 - hydrogen peroxide catabolic process, GO:0009585 - red, far-red light phototransduction, GO:0007600 - sensory perception, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0007623 - circadian rhythm, GO:0018106 - peptidyl-histidine phosphorylation, GO:0016020 - membrane, GO:0008020 - G-protein coupled photoreceptor activity, GO:0009658 - chloroplast organization, GO:0030912 - response to deep water, GO:0009881 - photoreceptor activity, GO:0010114 - response to red light, GO:0009640 - photomorphogenesis, GO:0017006 - protein-tetrapyrrole linkage, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0000155 - two-component sensor activity, GO:0018298 - protein-chromophore linkage, GO:0048573 - photoperiodism, flowering, GO:0042803 - protein homodimerization activity","TO:0000524 - submergence tolerance, TO:0002685 - crown root number, TO:0000586 - seminal root length, TO:0000135 - leaf length, TO:0000158 - red light sensitivity, TO:0000326 - leaf color, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0002616 - flowering time, TO:0000298 - chlorophyll ratio, TO:0000566 - stomatal frequency, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000346 - tiller number, TO:0002710 - root shape",null,"Os03g0309200","LOC_Os03g19590.1",null,"Os02g0540700","Os02g0743400","Os12g0104400",0,1.972546,null,"PDCD5","OsPDCD5","PROGRAMMED CELL DEATH 5","programmed cell death 5",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0012501 - programmed cell death, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0010600 - regulation of auxin biosynthetic process, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0003677 - DNA binding, GO:0009691 - cytokinin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0009740 - gibberellic acid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0009926 - auxin polar transport","TO:0002672 - auxin content, TO:0002660 - cytokinin content, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0002675 - gibberellic acid content, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000145 - internode length","PO:0009066 - anther , PO:0009039 - glume , PO:0009047 - stem , PO:0020142 - stem internode , PO:0025034 - leaf , PO:0005020 - vascular bundle , PO:0009005 - root ","Os05g0547850","LOC_Os05g47446.1, LOC_Os05g47446.2","Os02g0148000","Os02g0777800","Os12g0420300",2.8395805,0,null,"LGT","lgt","LONG TWISTED GRAIN","long twisted grain",1," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000484 - seed shape, TO:0000146 - seed length","PO:0009010 - seed ",null,null,"Os08g0190100","Os06g0192100","Os01g0633100",1.5410696,1.1146822,null,"SM","Sm","STEM MAGGOT RESISTANCE","Stem maggot resistance",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000332 - rice whorl maggot resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os02g0755000","Os06g0336200","Os10g0150800",0,3.9466743,null,"qNFPB-11-1(t)","qNFPB-11-1(t)","Number of florets per primary branch (QTL)-11-1(t)","Number of florets per primary branch (QTL)-11-1(t)",11," Character as QTL - Yield and productivity",{"$nulls":5},"Os10g0573000","Os02g0755000","Os01g0659900",3.0577822,0]
[{"$nulls":6},"Os01g0210200","LOC_Os01g11200",-1.366676,"Os03g0341000","LOC_Os03g22170","ERF",-1.8170595,null,"Os01g0195000",{"$nulls":8},"Os04g0577300","Os10g0180800","Os04g0430200","Os04g0430200",2.825072,2.148569,null,"Os03g0162800",6.6523795,"Os10g0580400",-2.238878,{"$nulls":17},"Os06g0551400",-1.2561706,-1.1777105,{"$nulls":9},"SPA15","SPA15","SENESCENCE ASSOCIATED GENE","senescence associated gene",null," Vegetative organ - Leaf","GO:0010150 - leaf senescence",{"$nulls":4},"LOC_Os04g57320.2, LOC_Os04g57320.1","Os04g0556500","Os04g0659300","Os02g0198300",2.1420994,1.8940853,null,"DDF1","OsDDF1","DWARF AND DEFORMED FLOWER 1","Dwarf and deformed flower 1, dwarf and deformed flower 1-1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051302 - regulation of cell division, GO:0001558 - regulation of cell growth, GO:0005730 - nucleolus, GO:0010093 - specification of floral organ identity","TO:0000145 - internode length, TO:0000135 - leaf length, TO:0000258 - leaf thickness, TO:0000227 - root length, TO:0006009 - lodicule anatomy and morphology trait, TO:0006032 - panicle size, TO:0000557 - secondary branch number, TO:0000472 - vascular bundle number, TO:0002692 - root meristem development, TO:0000470 - vascular tissue related trait, TO:0000576 - stem length, TO:0000339 - stem thickness, TO:0000223 - pistil anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait, TO:0000437 - male sterility, TO:0000614 - lemma shape, TO:0006020 - shoot apical meristem development, TO:0000306 - root thickness, TO:0000040 - panicle length, TO:0000547 - primary branch number",null,"Os06g0139000","LOC_Os06g04710.1","Os01g0700200","Os06g0164400","Os05g0370600",2.8318436,0,null,"SH2","sh2","SHATTERING 2","shattering2, shattering 2, shattering-2",1," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering","PO:0009010 - seed ",null,null,"Os07g0568300","Os05g0554400","Os07g0461600",1.5882597,1.0471126,null,"SPL11","spl11, spl11*, OsPUB11, PUB11","SPOTTED LEAF 11","spotted leaf11, spotted leaf-11, Protein spotted leaf 11, Cell death-related protein SPL11, plant U-box-containing protein 11, U-box protein 11",12," Reproductive organ - Heading date,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance","GO:0000151 - ubiquitin ligase complex, GO:0050832 - defense response to fungus, GO:0004842 - ubiquitin-protein ligase activity, GO:0005488 - binding, GO:0016567 - protein ubiquitination, GO:0019941 - modification-dependent protein catabolic process, GO:0043066 - negative regulation of apoptosis, GO:0009614 - disease resistance, GO:0042742 - defense response to bacterium, GO:0031347 - regulation of defense response, GO:0045824 - negative regulation of innate immune response, GO:0043067 - regulation of programmed cell death, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering","TO:0000112 - disease resistance, TO:0000069 - variegated leaf, TO:0000063 - mimic response, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease","PO:0009025 - vascular leaf ","Os12g0570000","LOC_Os12g38210.1","Os10g0562700","Os09g0422500","Os05g0178300",3.8853197,3.9466164,null,"qFPFFA-1-1(t)","qFPFFA-1-1(t)","Frequency of pre-flowering floret abortion (QTL)-1-1(t)","Frequency of pre-flowering floret abortion (QTL)-1-1(t)",1," Character as QTL - Yield and productivity",{"$nulls":5},"Os01g0511600","Os10g0562700","Os05g0571200",2.9214642,0]
[{"$nulls":6},"Os07g0633200","LOC_Os07g43950",-1.363359,"Os05g0346200","LOC_Os05g27930","ERF",-1.1557907,null,"Os09g0555100",{"$nulls":8},"Os06g0725200","Os09g0489500","Os03g0118600","Os03g0118600",2.7434785,5.2110105,null,"Os10g0127900",6.643799,"Os09g0489500",-2.236131,{"$nulls":17},"Os09g0467200",-1.9053453,-1.392368,{"$nulls":9},"WAF1","OsWAF1, waf1, waf1-1, waf1-2, HEN1","WAVY LEAF 1","wavy leaf 1-1, wavy leaf 1-2, WAVY LEAF1, HUA ENHANCER 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development, GO:0008171 - O-methyltransferase activity, GO:0008173 - RNA methyltransferase activity, GO:0007275 - multicellular organismal development, GO:0010076 - maintenance of floral meristem identity",null,"PO:0007615 - flower development stage ","Os07g0164000","LOC_Os07g06970.1","LOC_Os02g45250.1","Os11g0490900","Os09g0439800","Os02g0152900",0,1.8932557,null,"PRP5","OsPRP5, OsRH42, RH42","_","Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0016607 - nuclear speck, GO:0008026 - ATP-dependent helicase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0003723 - RNA binding, GO:0030620 - U2 snRNA binding","TO:0000181 - seed weight, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0002759 - grain number","PO:0020040 - leaf base , PO:0020139 - leaf midvein , PO:0020137 - leaf apex , PO:0020103 - flag leaf , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root ","Os08g0159900","LOC_Os08g06344.1, LOC_Os08g06344.2, LOC_Os08g06344.3","Os01g0715400","Os04g0566500","Os02g0586900",2.7975466,0,null,"SHR1","shr1, sh1, shr","SHRUNKEN ENDOSPERM 1","shrunken endosperm1, shrunken endosperm 1, shrunken eudosperm-1, shrunken",1," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain","TO:0002658 - starch grain synthesis, TO:0000100 - shrunken endosperm, TO:0002655 - starch grain size, TO:0000266 - chalky endosperm, TO:0000587 - endosperm quality","PO:0009089 - endosperm ",null,null,"Os01g0229400","Os08g0562500","Os06g0498400",1.4988832,1.0321459,null,"TSV2","tsv2","RICE TUNGRO SPHERICAL VIRUS RESISTANCE 2","rice tungro spherical virus resistance2, rice tungro spherical virus resistance 2, rice tungro spherical virus resistance-2",null," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000413 - rice tungro virus resistance",{"$nulls":3},"Os01g0927600","Os02g0657000","Os06g0604200",0,3.9052277,null,"qFPFFA-10-1(t)","qFPFFA-10-1(t)","Frequency of pre-flowering floret abortion (QTL)-10-1(t)","Frequency of pre-flowering floret abortion (QTL)-10-1(t)",10," Character as QTL - Yield and productivity",{"$nulls":5},"Os03g0175800","Os01g0927600","Os09g0241100",2.641684,0]
[{"$nulls":6},"Os01g0318400","LOC_Os01g21590",-1.3575705,"Os07g0227600","LOC_Os07g12510","ERF",-1.3763108,null,"Os11g0609600",{"$nulls":8},"Os02g0669000","Os07g0152700","Os06g0725000","Os06g0725000",2.6545215,3.0041504,null,"Os04g0602500",6.577109,"Os12g0129700",-2.2358558,{"$nulls":17},"Os02g0603600",0,-1.372179,{"$nulls":9},"WRKY10","OsWRKY10","WRKY GENE 10","Rice WRKY gene10",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009408 - response to heat, GO:0043565 - sequence-specific DNA binding, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0009409 - response to cold","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os01g0186000","LOC_Os01g09100.1",null,"Os03g0266200","Os08g0441500","Os08g0532200",1.8331337,1.8685623,null,"_","OsBBX13, BBX13, OsRIP1, RIP1","_","B-box-containing protein 13, OsRE1-INTERACTING PROTEIN 1, RE1-INTERACTING PROTEIN 1",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0048573 - photoperiodism, flowering, GO:0008270 - zinc ion binding, GO:0007623 - circadian rhythm, GO:0005622 - intracellular","TO:0000040 - panicle length, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0007616 - flowering stage , PO:0025034 - leaf , PO:0009006 - shoot system ","Os04g0540200","LOC_Os04g45690.1","Os03g0673600","Os08g0383250","Os11g0556400",2.710288,0,null,"RD","Rd, DFR, OsDFR, OS-DFR","RED PERICARP AND SEED COAT","Red pericarp and seed coat, dihydroflavonol 4-reductase, dihydroflavonol-4-reductase",1," Biochemical character,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0003824 - catalytic activity, GO:0009416 - response to light stimulus, GO:0009813 - flavonoid biosynthetic process, GO:0010023 - proanthocyanidin biosynthetic process, GO:0002213 - defense response to insect, GO:0051555 - flavonol biosynthetic process, GO:0044237 - cellular metabolic process, GO:0043473 - pigmentation, GO:0005634 - nucleus, GO:0050662 - coenzyme binding, GO:0048316 - seed development, GO:0009718 - anthocyanin biosynthetic process, GO:0009812 - flavonoid metabolic process, GO:0009408 - response to heat","TO:0000706 - hull color, TO:0000185 - stigma color, TO:0000205 - white-backed planthopper resistance, TO:0000190 - seed coat color, TO:0000259 - heat tolerance, TO:0000653 - seed development trait, TO:0000486 - seed color, TO:0000487 - endosperm color, TO:0000140 - apiculus color, TO:0000075 - light sensitivity, TO:0000326 - leaf color, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color","PO:0006033 - paleal apiculus , PO:0009073 - stigma , PO:0009088 - seed coat , PO:0009089 - endosperm , PO:0001170 - seed development stage ","Os01g0633500","LOC_Os01g44260.1","Os05g0405000","Os02g0805250","Os05g0533600",0,1.0277737,null,"TUVA","Tuva, Tuv3","TUNGRO RESISTANCE A","Tungro resistance-a, Tungro resistance-3",null," Tolerance and resistance - Disease resistance","GO:0009814 - defense response, incompatible interaction, GO:0051607 - defense response to virus","TO:0000413 - rice tungro virus resistance",{"$nulls":3},"Os01g0949400","Os09g0441900","Os11g0490600",6.2186036,3.9044907,null,"qFPFFA-11-1(t)","qFPFFA-11-1(t)","Frequency of pre-flowering floret abortion (QTL)-11-1(t)","Frequency of pre-flowering floret abortion (QTL)-11-1(t)",11," Character as QTL - Yield and productivity",{"$nulls":5},"Os10g0554200","Os01g0949400","Os03g0340500",2.476517,0]
[{"$nulls":6},"Os01g0720400","LOC_Os01g52230",-1.3515873,"Os10g0371100","LOC_Os10g22600","ERF",1.6778313,null,"Os02g0635000",{"$nulls":8},"Os06g0149100","Os01g0219000","Os05g0227600","Os05g0227600",2.6376226,3.817176,null,"Os06g0142350",6.547705,"Os01g0882400",-2.2290983,{"$nulls":17},"Os03g0146400",-2.0158217,-1.6110601,{"$nulls":9},"WRKY14","OsWRKY14","WRKY GENE 14","Rice WRKY gene14",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0050832 - defense response to fungus, GO:0010150 - leaf senescence, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os01g0730700","LOC_Os01g53040.1","LOC_Os03g57660.1, LOC_Os03g57670.1, LOC_Os03g57660.3, LOC_Os03g57660.2, LOC_Os03g57660.4","Os01g0547600","Os06g0595900","Os03g0856700",1.9106296,1.865975,null,"_","JMJ703","_","Jumonji 703",5," Reproductive organ - panicle","GO:0051213 - dioxygenase activity, GO:0010229 - inflorescence development, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008198 - ferrous iron binding, GO:0032453 - histone demethylase activity (H3-K4 specific), GO:0034720 - histone H3-K4 demethylation, GO:0040010 - positive regulation of growth rate, GO:0045814 - negative regulation of gene expression, epigenetic, GO:0005634 - nucleus","TO:0000621 - inflorescence development trait, TO:0006032 - panicle size","PO:0001083 - inflorescence development stage ","Os05g0196500","LOC_Os05g10770.1","Os04g0477500","Os05g0196500","Os04g0481700",2.6838348,0,null,"AE3","ae3(t)*, ae3","AMYLOSE EXTENDER 3","amylose extender3, amylose extender 3, amylose extender-3",2," Seed - Physiological traits - Storage substances","GO:0007275 - multicellular organismal development, GO:0000271 - polysaccharide biosynthetic process","TO:0000196 - amylose content, TO:0000587 - endosperm quality, TO:0000487 - endosperm color, TO:0000098 - glutinous endosperm","PO:0009089 - endosperm ",null,null,"Os01g0184100","Os06g0205100","Os06g0267500",0,1.0231409,null,"TUVB","Tuvb, Tuv4","TUNGRO RESISTANCE B","Tungro resistance-b, Tungro resistance-4",null," Tolerance and resistance - Disease resistance","GO:0051607 - defense response to virus, GO:0009814 - defense response, incompatible interaction","TO:0000413 - rice tungro virus resistance",{"$nulls":3},"Os02g0768600","Os07g0156200","Os02g0236800",5.022431,3.900514,null,"qPNN-2-1(t) (Pnn1)","qPNN-2-1(t) (Pnn1)","panicle number (QTL)-2-1(t)","panicle number (QTL)-2-1(t)",2," Character as QTL - Yield and productivity",{"$nulls":5},"Os12g0194900","Os02g0768600","Os01g0357100",2.2584693,0]
[{"$nulls":6},"Os02g0683500","LOC_Os02g45850",-1.3406903,"Os02g0174000","LOC_Os02g07770","G2-like",1.1381454,null,"Os01g0231000",{"$nulls":8},"Os01g0827700","Os04g0683700","Os05g0232200","Os05g0232200",2.6305392,4.457756,null,"Os05g0387300",6.5283504,"Os08g0378000",-2.227124,{"$nulls":17},"Os07g0150700",0,-1.7380567,{"$nulls":9},"WRKY2","OsWRKY2","RICE WRKY GENE2","Rice WRKY gene2",10," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000249 - leaf senescence, TO:0000259 - heat tolerance","PO:0001054 - 4 leaf senescence stage ","Os10g0579400","LOC_Os10g42850.1","LOC_Os07g03770.1","Os07g0209000","Os01g0495900","Os03g0685000",2.4836004,1.8466314,null,"MIR168A","miR168a, osa-miR168a, osa-MIR168a osa-miR168a-3p osa-miR168a-5p, OsMIR168a","MICRORNA168A","MICRORNA168a, osa-miRNA168a",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0048573 - photoperiodism, flowering, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling","TO:0000202 - germination ratio, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0002768 - spikelet length, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability",{"$nulls":3},"Os11g0667700","Os01g0234900","Os09g0241100",2.641684,0,null,"GLU10","Glu10t*","GLUTELIN 10","Glutelin subunit10",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",{"$nulls":4},"Os03g0826500","Os10g0390500","Os03g0123300",2.6666102,1.0072118,null,"WBPH2","Wph2","WHITEBACKED PLANTHOPPER RESISTANCE 2","Whitebacked planthopper resistance2, Whitebacked planthopper resistance 2, Whitebacked planthopper resistance-2",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os01g0885000","Os01g0293900","Os11g0242800",2.7024975,3.8949242,null,"qSN-1-2(t) (QSn1)","qSN-1-2(t) (QSn1)","spikelet number per panicle (QTL)-1-2(t)","spikelet number per panicle (QTL)-1-2(t)",1," Character as QTL - Yield and productivity",{"$nulls":5},"Os10g0567400","Os01g0885000","Os09g0459200",2.2374077,0]
[{"$nulls":6},"Os08g0499300","LOC_Os08g38990",{"$f":"VLOOKUP(G67,AG:AH, 2,FALSE)","v":-1.3271414},"Os04g0665600","LOC_Os04g56990","G2-like",-1.3667952,null,"Os09g0361500",{"$nulls":8},"Os03g0581400","Os03g0808600","Os06g0683200","Os06g0683200",2.6255937,2.028394,null,"Os03g0269300",6.5129943,"Os03g0725200",-2.226667,{"$nulls":17},"Os02g0433600",0,-1.2790259,{"$nulls":9},"WRKY24","OsWRKY24","WRKY GENE 24","Rice WRKY gene24",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009611 - response to wounding, GO:0003700 - transcription factor activity, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect, GO:0080027 - response to herbivore, GO:0006952 - defense response, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000424 - brown planthopper resistance, TO:0000454 - stem borer resistance, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait, TO:0000074 - blast disease","PO:0020039 - leaf lamina ","Os01g0826400","LOC_Os01g61080.1",null,"Os01g0883800","Os06g0695600","Os09g0441900",3.2746305,1.8199071,null,"DWT1","OsWOX7, Os WOX7, WOX7, OsWOX9A, DWT1/WOX9A, OsDWT1, WOX9A","DWARF TILLER 1","DWARF TILLER1, WUSCHEL-related homeobox 7, WUSCHEL-LIKE HOMEOBOX 7",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Other","GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0051301 - cell division, GO:0009826 - unidimensional cell growth, GO:0009690 - cytokinin metabolic process, GO:0009736 - cytokinin mediated signaling, GO:0010336 - gibberellic acid homeostasis, GO:0010476 - gibberellin-mediated signaling, GO:0009790 - embryonic development, GO:0007275 - multicellular organismal development, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity","TO:0000396 - grain yield, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000077 - shoot anatomy and morphology trait, TO:0000620 - embryo development trait, TO:0006036 - stem elongation, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0001005 - basal tiller length","PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os01g0667400","LOC_Os01g47710.1",null,"Os03g0132800","Os03g0172100",2.4267752,0,null,"GLU4","Glu4t*(Glu4), Glu4, Glu4t, Glu4t*, Glu15","GLUTELIN 4","Glutelin subunit4, Glutelin subunit 4, Glutelin subunit-4, Rice glutelin-15",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os02g0174100","Os05g0589700","Os03g0170400",0,0.98200226,null,"WBPH3","Wph3","WHITEBACKED PLANTHOPPER RESISTANCE 3","Whitebacked planthopper resistance3, Whitebacked planthopper resistance 3, Whitebacked planthopper resistance-3",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os07g0497100","Os01g0901000","Os02g0197600",4.6723037,3.8901205,null,"qSN-4-1(t) (QSn4)","qSN-4-1(t) (QSn4)","spikelet number per panicle (QTL)-4-1(t)","spikelet number per panicle (QTL)-4-1(t)",4," Character as QTL - Yield and productivity",{"$nulls":5},"Os05g0211100","Os07g0497100","Os02g0301100",2.0793974,0]
[{"$nulls":6},"Os01g0846800","LOC_Os01g62810",-1.3124882,"Os01g0343300","LOC_Os01g24070","GATA",{"$f":"VLOOKUP(K68,H:I, 2,FALSE)","v":1.6746718},null,"Os05g0230700",{"$nulls":8},"Os01g0329900","Os03g0246800","Os07g0539100","Os07g0539100",2.6156878,1.6647385,null,"Os04g0678700",6.5093646,"Os02g0193200",-2.2218125,{"$nulls":17},"Os01g0841600",0,-1.489267,{"$nulls":9},"WRKY26","OsWRKY26, OsWRKY59, DLN19, OsDLN19","WRKY GENE 26","Rice WRKY gene 26, Rice WRKY gene 59, DLN repressor 19, DLN motif protein 19",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007568 - aging, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0050832 - defense response to fungus","TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease","PO:0001054 - 4 leaf senescence stage ","Os01g0714800","LOC_Os01g51690.1",null,"Os03g0146400","Os06g0203800","Os02g0731700",0,1.7829956,null,"PLS1","OsVHA-A, VHAA1, VHA-A1, OsVHA-A1, OsPLS1, OsPSL1/VHA-A1","PREMATURE LEAF SENESCENCE 1","vacuolar H+-ATPase subunit A, vacuolar-type H+-ATPase subunit A1, premature leaf senescence 1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005618 - cell wall, GO:0009734 - auxin mediated signaling pathway, GO:0007030 - Golgi organization, GO:0009555 - pollen development, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0033180 - proton-transporting V-type ATPase, V1 domain, GO:0009737 - response to abscisic acid stimulus, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010148 - transpiration, GO:0010150 - leaf senescence, GO:0010162 - seed dormancy, GO:0009941 - chloroplast envelope, GO:0046961 - proton-transporting ATPase activity, rotational mechanism, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0000325 - plant-type vacuole, GO:0005886 - plasma membrane, GO:0005774 - vacuolar membrane, GO:0005524 - ATP binding","TO:0000063 - mimic response, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000455 - seed set percent, TO:0000128 - harvest index, TO:0000592 - 1000-dehulled grain weight, TO:0000598 - protein content, TO:0000333 - sugar content, TO:0001027 - net photosynthetic rate, TO:0000040 - panicle length, TO:0000253 - seed dormancy, TO:0000249 - leaf senescence, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000615 - abscisic acid sensitivity, TO:0001018 - transpiration rate","PO:0001054 - 4 leaf senescence stage , PO:0025374 - seed dormant stage , PO:0020025 - micropyle ","Os06g0662000 ","LOC_Os06g45120.2, LOC_Os06g45120.1",null,"Os07g0497100","Os05g0387700",2.4045897,0,null,"GLU5","Glu5t*(Glu5), Glu5, Glu5t, Glu5t*","GLUTELIN 5","Glutelin subunit5, Glutelin subunit 5, Glutelin subunit-5, Rice glutelin-16",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os06g0474200","Os02g0450000","Os04g0537900",0,0.9706742,null,"WBPH4","wph4","WHITEBACKED PLANTHOPPER RESISTANCE 4","whitebacked planthopper resistance4, whitebacked planthopper resistance 4, whitebacked planthopper resistance-4",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os03g0757500","Os11g0210500","Os11g0115400",0,3.8844478,null,"qSN-6-2(t) (QSn6)","qSN-6-2(t) (QSn6)","spikelet number per panicle (QTL)-6-2(t)","spikelet number per panicle (QTL)-6-2(t)",6," Character as QTL - Yield and productivity",{"$nulls":5},"Os12g0168700","Os03g0757500","Os07g0471900",2.0470483,0]
[{"$nulls":6},"Os01g0685400","LOC_Os01g49160",-1.3034965,"Os02g0220400","LOC_Os02g12790","GATA",1.3303136,null,"Os01g0670800",{"$nulls":8},"Os07g0586200","Os07g0209000","Os02g0690000","Os02g0690000",2.5958102,2.6725676,null,"Os07g0204400",6.5019193,"Os12g0431100",-2.2190163,{"$nulls":17},"Os10g0491000",-4.852097,-1.8751928,{"$nulls":9},"WRKY29","OsWRKY29","WRKY GENE 29","Rice WRKY gene29",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0007568 - aging, GO:0009751 - response to salicylic acid stimulus, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000188 - drought sensitivity","PO:0001054 - 4 leaf senescence stage ","Os07g0111400","LOC_Os07g02060.1",null,"Os10g0573900","Os01g0507000","Os03g0169800",2.1932287,1.6628205,null,"WOX9C","OsWOX9C, DWL2, OsDWL2, DWL2/WOX9C","WUSCHEL-LIKE HOMEOBOX 9C","WUSCHEL-related homeobox 9C, DWT-LIKE 2",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000346 - tiller number, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000145 - internode length","PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os05g0564500","LOC_Os05g48990.1",null,"Os03g0757500","Os07g0605200",2.3901968,0,null,"GLU6","Glu6t*(Glu6,GluB,C,E), GluE, GluB, Glu6t*, GluC, Glu6t, Glu6, Glu17","GLUTELIN 6","Glutelin subunit6, Glutelin subunit 6, Glutelin subunit-6, Rice glutelin-17",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os01g0524500","Os01g0659900","Os01g0165200",0,0.9594617,null,"WBPH5","Wph5","WHITEBACKED PLANTHOPPER RESISTANCE 5","Whitebacked planthopper resistance5, Whitebacked planthopper resistance 5, Whitebacked planthopper resistance-5",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os11g0544600","Os08g0546100","Os05g0227600",2.6376226,3.817176,null,"qSN-9-1(t) (QSn9a)","qSN-9-1(t) (QSn9a)","spikelet number per panicle (QTL)-9-1(t)","spikelet number per panicle (QTL)-9-1(t)",9," Character as QTL - Yield and productivity",{"$nulls":5},"Os02g0137800","Os11g0544600","Os02g0494000",1.9630948,0]
[{"$nulls":6},"Os01g0757500","LOC_Os01g55270",-1.2921511,"Os02g0806300","LOC_Os02g56250","GATA",-0.9889768,null,"Os01g0851600",{"$nulls":8},"Os01g0649900","Os03g0124000","Os08g0208200","Os08g0208200",2.5789468,2.2369096,null,"Os12g0138500",6.4889946,"Os09g0343200",-2.1994035,{"$nulls":17},"Os08g0499300",-2.1273124,-1.3271414,{"$nulls":9},"WRKY42","OsWRKY42, WRKY-42","WRKY GENE 42","Rice WRKY gene42, WRKY transcription factor 42",2," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus, GO:0009790 - embryonic development, GO:0003700 - transcription factor activity, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0010150 - leaf senescence, GO:0009753 - response to jasmonic acid stimulus","TO:0006001 - salt tolerance, TO:0000188 - drought sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os02g0462800","LOC_Os02g26430.1","LOC_Os01g10040.1, LOC_Os01g10040.2","Os06g0354700","Os04g0684500","Os02g0573200",-1.1510574,1.6562303,null,"BZIP1","OsbZIP01, OsbZIP1, OsRE1, RE1","b-ZIP TRANSCRIPTION FACTOR 1","b-ZIP transcription factor 01, regulator of Ehd1",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0048573 - photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0025034 - leaf ","Os01g0174000","LOC_Os01g07880.1",null,"Os11g0544600","Os02g0811000",2.3510377,0,null,"GLU7","Glu7t*(Glu7,GluA), GluA, Glu7t, Glu7, Glu18","GLUTELIN 7","Glutelin subunit7, Glutelin subunit 7, Glutelin subunit-7, Rice glutelin-18",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os01g0788800","Os01g0323100","Os08g0473600",6.2063766,0,null,"WPH6(T)*","Wph6(t)*, Wph6(t), Wph6","WHITEBACKED PLANTHOPPER RESISTANCE6","Whitebacked planthopper resistance6, Whitebacked planthopper resistance 6, Whitebacked planthopper resistance-6",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os07g0681500","Os02g0733300","Os03g0123500",4.8892865,3.811927,null,"qSN-9-2(t) (QSn9b)","qSN-9-2(t) (QSn9b)","spikelet number per panicle (QTL)-9-2(t)","spikelet number per panicle (QTL)-9-2(t)",9," Character as QTL - Yield and productivity",{"$nulls":6},"Os07g0681500","Os06g0194900",1.9279588,0]
[{"$nulls":6},"Os02g0433600","LOC_Os02g23823",-1.2790259,"Os05g0155400","LOC_Os05g06340","GATA",2.987538,null,"Os04g0118100",{"$nulls":8},"Os01g0214600","Os01g0952900","Os09g0491100","Os09g0491100",2.5668914,4.143511,null,"Os11g0460800",6.4827347,"Os01g0950700",-2.1979692,{"$nulls":17},"Os02g0704000",-5.3020196,-2.4485574,{"$nulls":9},"WRKY47","OsWRKY47","WRKY GENE 47","Rice WRKY gene47",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0003700 - transcription factor activity","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance","PO:0001054 - 4 leaf senescence stage ","Os07g0680400","LOC_Os07g48260.1","LOC_Os03g40540.1","Os10g0580400","Os03g0858800","Os05g0211100",0,1.6188742,null,"Hb2","HB2, OsHB2, OsNSHB2, hb2, GLB1b, ORYsa GLB1b, OsPgb1.2, Pgb1.2","HEMOGLOBIN 2","non-symbiotic hemoglobin 2, Non-legume hemoglobin, Phytogb1.2, phytoglobin 1.2",3," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0010167 - response to nitrate, GO:0005886 - plasma membrane, GO:0019825 - oxygen binding, GO:0020037 - heme binding, GO:0080033 - response to nitrite, GO:0005618 - cell wall, GO:0010229 - inflorescence development, GO:0051592 - response to calcium ion, GO:0015671 - oxygen transport, GO:0005829 - cytosol","TO:0000605 - hydrogen peroxide content, TO:0000006 - calcium sensitivity, TO:0000480 - nutrient sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000008 - potassium sensitivity, TO:0000609 - potassium content, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0226200","LOC_Os03g12510.1",null,"Os02g0579600","Os09g0459200",2.2374077,0,null,"GLU8","Glu8t*(GluE)","GLUTELIN 8","Glutelin subunit8",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",{"$nulls":4},"Os03g0238600","Os11g0556400","Os05g0361700",4.630455,0,null,"XA NM(T)*","xa nm(t)*","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE NM","Xanthomonas oryzae pv. oryzae resistance-nm",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os01g0922800","Os01g0938100","Os02g0593500",0,3.7982666,null,"qSF-2-1(t) (QSf2)","qSF-2-1(t) (QSf2)","spikelet fertility (QTL)-2-1(t)","spikelet fertility (QTL)-2-1(t)",2," Character as QTL - Yield and productivity",{"$nulls":6},"Os01g0922800","Os01g0507000",1.9223205,0]
[{"$nulls":6},"Os12g0226700","LOC_Os12g12560",-1.2686224,"Os05g0567900","LOC_Os05g49280","GATA",-1.055427,null,"Os01g0924000","Ctokinin related",{"$nulls":7},"Os01g0215500","Os01g0701700","Os03g0828100","Os03g0828100",2.5499413,3.0872662,null,"Os04g0630300",6.4725347,"Os07g0507500",-2.1964633,{"$nulls":17},"Os02g0601300",1.6465193,-0.9919462,{"$nulls":9},"WRKY49","OsWRKY49","WRKY GENE 49","Rice WRKY gene49",5," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0010150 - leaf senescence","TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os05g0565900","LOC_Os05g49100.1","LOC_Os02g53690.1","Os01g0866400","Os04g0585200","Os09g0422500",3.34322,1.567009,null,"GLP8-10","OsGLP8-10, OsRGLP2, RGLP2","GERMIN-LIKE PROTEIN 8-10","Germin-like protein 8-10",8," Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0034059 - response to anoxia, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0002242 - defense response to parasitic plant, GO:0048316 - seed development, GO:0002213 - defense response to insect, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding, GO:0050832 - defense response to fungus","TO:0000439 - fungal disease resistance, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000315 - bacterial disease resistance, TO:0000424 - brown planthopper resistance, TO:0000303 - cold tolerance, TO:0000444 - parasitic weed, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000015 - oxygen sensitivity","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009010 - seed ","Os08g0189900","LOC_Os08g09060.1",null,"Os10g0370100","Os09g0543100",2.2333329,0,null,"GLU9","Glu9t*","GLUTELIN 9","Glutelin subunit9",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",{"$nulls":4},"Os01g0322700","Os06g0548200","Os06g0247500",4.3934584,0,null,"XA11","Xa11(Xa pt), Xa11, Xapt","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 11","Xanthomonas oryzae pv. oryzae resistance 11, Xanthomonas campestris pv. oryzae resistance-11, Xanthomonas oryzae pv. oryzae resistance-11",3," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os09g0443500","Os05g0134400","Os03g0412300",4.613917,3.7760708,null,"qSF-6-2(t) (QSf6)","qSF-6-2(t) (QSf6)","spikelet fertility (QTL)-6-2(t)","spikelet fertility (QTL)-6-2(t)",6," Character as QTL - Yield and productivity",{"$nulls":6},"Os09g0443500","Os03g0858800",1.8806342,0]
[{"$nulls":6},"Os06g0667100","LOC_Os06g45640",-1.2620894,"Os06g0571800","LOC_Os06g37450","GATA",3.0469806,null,"Os02g0220400",{"$nulls":8},"Os01g0650200","Os04g0538000","Os09g0439500","Os09g0439500",2.5222135,3.9424746,null,"Os03g0182900",6.4664645,"Os04g0608600",-2.194215,{"$nulls":17},"Os01g0952800",-4.5512953,-1.7507919,{"$nulls":9},"WRKY5","OsWRKY5","WRKY GENE 5","Rice WRKY gene5",5," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0010271 - regulation of chlorophyll catabolic process, GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0009646 - response to absence of light, GO:0009753 - response to jasmonic acid stimulus, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0043565 - sequence-specific DNA binding","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence, TO:0000303 - cold tolerance, TO:0002667 - abscisic acid content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os05g0137500","LOC_Os05g04640.1","LOC_Os06g38470.1, LOC_Os06g38470.2, LOC_Os06g38470.3","Os03g0764900","Os09g0529300","Os02g0762600",3.7549706,1.5669626,null,"DPS1","OsCBSDUF1, OsCBSDUF1a, OsCBSDUF1b, CBSDUF1, CBSDUF1a, CBSDUF1b","DEGENERATED PANICLE AND PARTIAL STERILITY 1","cystathionine b-synthase domain containing protein OsCBSDUF1, CBS domain containing protein OsCBSDUF1",5," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010025 - wax biosynthetic process, GO:0042542 - response to hydrogen peroxide, GO:0010143 - cutin biosynthetic process, GO:0006631 - fatty acid metabolic process, GO:0043069 - negative regulation of programmed cell death, GO:0016209 - antioxidant activity, GO:0010229 - inflorescence development, GO:0042335 - cuticle development, GO:0048653 - anther development, GO:0005739 - mitochondrion","TO:0002657 - oxidative stress, TO:0000657 - spikelet anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000187 - anther color, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility","PO:0001004 - anther development stage , PO:0001083 - inflorescence development stage , PO:0009066 - anther ","Os05g0395300","LOC_Os05g32850.2, LOC_Os05g32850.1",null,"Os01g0765000","Os05g0563400",2.2042835,0,null,"TRI","tri","TRIANGULAR HULL","triangular hull",2," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000484 - seed shape, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009037 - lemma , PO:0009038 - palea ",null,null,"Os05g0204600","Os07g0500300","Os04g0460600",4.1927667,0,null,"XA16","Xa16","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 16","Xanthomonas oryzae pv. oryzae resistance 16, Xanthomonas campestris pv. oryzae resistance-16, Xanthomonas oryzae pv. oryzae resistance-16",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os10g0498700","Os05g0217800","Os09g0361500",3.678552,3.756293,null,"qSF-7-2(t) (QSf7)","qSF-7-2(t) (QSf7)","spikelet fertility (QTL)-7-2(t)","spikelet fertility (QTL)-7-2(t)",7," Character as QTL - Yield and productivity",{"$nulls":6},"Os10g0498700","Os09g0529300",1.831159,0]
[{"$nulls":6},"Os08g0176900","LOC_Os08g07970",-1.2607719,"Os04g0555000","LOC_Os04g46860","GRAS",1.7134777,null,"Os03g0125000",{"$nulls":8},"Os02g0101400","Os05g0555600","Os06g0573600","Os06g0573600",2.449732,3.277757,null,"Os02g0767300",6.4490943,"Os07g0619200",-2.1924903,{"$nulls":17},"Os04g0600300",-1.4118823,-1.8078017,{"$nulls":9},"WRKY53","OsWRKY53, WRKY-53","WRKY GENE 53","Rice WRKY gene53",5," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009741 - response to brassinosteroid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0002213 - defense response to insect, GO:0080027 - response to herbivore, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0000454 - stem borer resistance, TO:0002677 - brassinosteroid sensitivity",null,"Os05g0343400","LOC_Os05g27730.1","LOC_Os01g61810.2, LOC_Os01g61810.1","Os01g0930400","Os02g0557800","Os03g0786400",0,1.5608987,null,"DRM2","OsDRM2, osdrm2, DRM2-1","DOMAINS REARRANGED METHYLTRANSFERASE 2","domains rearranged methyltransferase 2, domains rearranged methylase 2",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0006306 - DNA methylation, GO:0010426 - DNA methylation on cytosine within a CHH sequence, GO:0006346 - methylation-dependent chromatin silencing, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0051567 - histone H3-K9 methylation, GO:0050832 - defense response to fungus, GO:0008168 - methyltransferase activity","TO:0000262 - panicle shape, TO:0002616 - flowering time, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000485 - sterility related trait, TO:0000657 - spikelet anatomy and morphology trait",null,"Os03g0110800","LOC_Os03g02010.4",null,"Os07g0222300","Os02g0188500",2.145386,0,null,"SH4","sh4, sh4(t)*(sh3), sh3, sh4","SHATTERING 4","shattering4, shattering 4, shattering-4, SHATTERING",3," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering","PO:0009010 - seed ",null,null,"Os04g0127800","Os09g0241100","Os06g0192100",4.112093,0,null,"XA17","Xa17","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 17","Xanthomonas oryzae pv. oryzae resistance 17, Xanthomonas campestris pv. oryzae resistance-17, Xanthomonas oryzae pv. oryzae resistance-17",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os08g0407200","Os08g0561700","Os02g0280700",2.494077,3.7561703,null,"qSF-12-1(t) (QSf12)","qSF-12-1(t) (QSf12)","spikelet fertility (QTL)-12-1(t)","spikelet fertility (QTL)-12-1(t)",12," Character as QTL - Yield and productivity",{"$nulls":6},"Os08g0407200","Os08g0155400",1.7667803,0]
[{"$nulls":6},"Os01g0734000","LOC_Os01g53260",-1.2598414,"Os05g0500600","LOC_Os05g42130","GRAS",2.6618528,null,"Os03g0267300",{"$nulls":8},"Os02g0740400","Os02g0207100","Os07g0686600","Os07g0686600",2.438549,2.4509923,null,"Os06g0141700",6.441534,"Os08g0203350",-2.1896985,{"$nulls":17},"Os07g0568300",0,-0.9563233,{"$nulls":9},"WRKY69","OsWRKY69","WRKY GENE 69","Rice WRKY gene69",8," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0010150 - leaf senescence, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0007568 - aging, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity","TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os08g0386200","LOC_Os08g29660.1","LOC_Os05g49780.1","Os01g0919800","Os12g0468600","Os12g0168700",0,1.5418793,null,"PAL1","OsPAL1, PAL, OsPAL06, ZB8, pal/zb8, PAL06, rPAL-P5, ZB8PAL, OsPAL, OsPAL2, OsPAL4, PAL4, PAL/ZB8, OsPAL6, PAL6","PHENYLALANINE AMMONIA-LYASE 1","phenylalanine ammonia-lyase 1, phenylalanine ammonia lyase",2," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Seed - Morphological traits,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0002238 - response to molecule of fungal origin, GO:0006559 - L-phenylalanine catabolic process, GO:0042742 - defense response to bacterium, GO:0009800 - cinnamic acid biosynthetic process, GO:0010229 - inflorescence development, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0002237 - response to molecule of bacterial origin, GO:0009609 - response to symbiotic bacterium, GO:0010200 - response to chitin, GO:0009635 - response to herbicide, GO:0002213 - defense response to insect, GO:0009697 - salicylic acid biosynthetic process, GO:0046688 - response to copper ion, GO:0032355 - response to estradiol stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0050832 - defense response to fungus, GO:0009718 - anthocyanin biosynthetic process, GO:0010332 - response to gamma radiation, GO:0006952 - defense response, GO:0002215 - defense response to nematode, GO:0005737 - cytoplasm","TO:0000468 - leaf blast disease resistance, TO:0000664 - fungal blight disease resistance, TO:0000401 - plant growth hormone sensitivity, TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000674 - phytochemical compound content, TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000315 - bacterial disease resistance, TO:0000058 - herbicide sensitivity, TO:0000021 - copper sensitivity, TO:0000421 - pollen fertility, TO:0000605 - hydrogen peroxide content, TO:0000071 - anthocyanin content, TO:0000424 - brown planthopper resistance, TO:0000384 - nematode damage resistance, TO:0000326 - leaf color, TO:0000074 - blast disease","PO:0009005 - root , PO:0001083 - inflorescence development stage ","Os02g0627100","LOC_Os02g41680.1",null,"Os03g0125800","Os02g0743400",2.1346276,0,null,"Z3","OsZ3, z3, SIET4, OsSIET4","ZEBRA 3","zebra3, zebra 3, zebra-3, silicon efflux transporter 4, Si efflux transporter 4",3," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Coloration - Others,  Seed - Morphological traits","GO:0015995 - chlorophyll biosynthetic process, GO:0055085 - transmembrane transport, GO:0007275 - multicellular organismal development, GO:0016021 - integral to membrane, GO:0048573 - photoperiodism, flowering, GO:0015746 - citrate transport","TO:0000486 - seed color, TO:0000069 - variegated leaf, TO:0000326 - leaf color, TO:0000339 - stem thickness, TO:0000495 - chlorophyll content, TO:0002616 - flowering time","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009051 - spikelet ","Os03g0147400","LOC_Os03g05390.11, LOC_Os03g05390.10, LOC_Os03g05390.9, LOC_Os03g05390.13, LOC_Os03g05390.12, LOC_Os03g05390.8, LOC_Os03g05390.7, LOC_Os03g05390.6, LOC_Os03g05390.5, LOC_Os03g05390.4, LOC_Os03g05390.3, LOC_Os03g05390.2, LOC_Os03g05390.1","Os03g0843300","Os03g0340500","Os05g0554400",3.8717346,0,null,"XA18","Xa18","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 18","Xanthomonas oryzae pv. oryzae resistance 18, Xanthomonas campestris pv. oryzae resistance-18, Xanthomonas oryzae pv. oryzae resistance-18",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os02g0741500","Os01g0618900","Os01g0323300",3.810583,3.7481315,null,"BRD2","brd2, OsBRD2, Dim/dwf1, Dim, dwf1, OsDWF1, DWF1, LTBSG1, OsLTBSG1, LHDD10, OsLHDD10, OsD-LDH3, D-LDH3","BRASSINOSTEROID DEFICIENT DWARF 2","brassinosteroid (BR)-deficient dwarf-2, BR-deficient dwarf2, brassinosteroid-deficient dwarf2, rice homolog of Arabidopsis thaliana DIMINUTO/DWARF1, Dim/dwf1 protein, DIMINUTO, DWARF1, Putative Cell elongation protein DIMINUTO, Cell elongation protein Dwarf1, Dimunito/Dwarf1, longer top branch and shorter grain 1, D-lactate dehydrogenase 3",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010154 - fruit development, GO:0005783 - endoplasmic reticulum, GO:0009834 - secondary cell wall biogenesis, GO:0048767 - root hair elongation, GO:0010075 - regulation of meristem growth, GO:0000272 - polysaccharide catabolic process, GO:0000271 - polysaccharide biosynthetic process, GO:0009664 - plant-type cell wall organization, GO:0005634 - nucleus, GO:0009932 - cell tip growth, GO:0010229 - inflorescence development, GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development, GO:0005982 - starch metabolic process, GO:0016126 - sterol biosynthetic process, GO:0009507 - chloroplast, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0048587 - regulation of short-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0016132 - brassinosteroid biosynthetic process, GO:0043481 - anthocyanin accumulation in tissues in response to UV light, GO:0048653 - anther development, GO:0050614 - delta24-sterol reductase activity, GO:0050660 - FAD binding, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0006084 - acetyl-CoA metabolic process, GO:0009808 - lignin metabolic process, GO:0009825 - multidimensional cell growth, GO:0019344 - cysteine biosynthetic process","TO:0000734 - grain length, TO:0002688 - leaf lamina joint bending, TO:0000326 - leaf color, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000495 - chlorophyll content, TO:0000382 - 1000-seed weight, TO:0000357 - growth and development trait, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0001002 - fruit development stage , PO:0000037 - shoot apex ","Os10g0397400","LOC_Os10g25780.3, LOC_Os10g25780.2, LOC_Os10g25780.1",null,"Os02g0741500","Os03g0445700",1.729031,0]
[{"$nulls":6},"Os04g0602300","LOC_Os04g51320",-1.2535847,"Os11g0705200","LOC_Os11g47870","GRAS",-1.414639,null,"Os03g0299900",{"$nulls":8},"Os03g0683800","Os04g0556500","Os05g0191500","Os05g0191500",2.3923044,3.1318233,null,"Os07g0106700",6.42135,"Os09g0468300",-2.1886747,{"$nulls":17},"Os04g0509600",0,-1.0550585,{"$nulls":9},"WRKY72","OsWRKY72, WRKY-72","WRKY GENE 72","Rice WRKY gene72",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0002213 - defense response to insect, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0006952 - defense response, GO:0010150 - leaf senescence","TO:0000303 - cold tolerance, TO:0000261 - insect damage resistance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity","PO:0001054 - 4 leaf senescence stage ","Os11g0490900","LOC_Os11g29870.1","LOC_Os05g38820.4","Os04g0469800","Os02g0626100","Os03g0712800",2.4170392,1.5344108,null,"ERF83","OsERF#083, OsERF083, OsERF83, AP2/EREBP#163, AP2/EREBP163","ETHYLENE RESPONSE FACTOR 83","ethylene response factor 83, APETALA2/ethylene-responsive element binding protein 163",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009607 - response to biotic stimulus","TO:0000040 - panicle length, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000179 - biotic stress trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000447 - filled grain number","PO:0009047 - stem , PO:0025034 - leaf , PO:0009005 - root , PO:0009015 - portion of vascular tissue ","Os03g0860100","LOC_Os03g64260.1",null,"Os03g0215900","Os06g0136900",2.0844412,0,null,"LKF","Lk f, Lkf","LONG KERNEL FUSAYOSHI","'Fusayoshi' long grain",3," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length, TO:0000181 - seed weight","PO:0009010 - seed ",null,null,"Os08g0189900","Os05g0387700","Os08g0562500",3.7348995,0,null,"XA19","xa19","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 19","Xanthomonas oryzae pv. oryzae resistance 19, Xanthomonas campestris pv. oryzae resistance-19, Xanthomonas oryzae pv. oryzae resistance-19",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os03g0151800","Os06g0695500","Os01g0839200",0,3.7316983,null,"GN1A","Gn1a, OsCKX2, CKX2, ckx2, Gn1a/OsCKX2, Os CKX2, CKX2/Gn1a","GRAIN NUMBER 1A","Cytokinin oxidase/dehydrogenase 2, grain number 1a, cytokinin oxidase 2, Grain number 1a/Cytokinin oxidase 2, Grain number 1 a",1," Biochemical character,  Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0032940 - secretion by cell, GO:0022900 - electron transport chain, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0019139 - cytokinin dehydrogenase activity, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress","TO:0000495 - chlorophyll content, TO:0000128 - harvest index, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000382 - 1000-seed weight, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000296 - vegetative vigor, TO:0000440 - grain number per plant, TO:0000136 - relative water content, TO:0000152 - panicle number, TO:0000496 - carotenoid content, TO:0000621 - inflorescence development trait, TO:0000052 - primary branching of inflorescence, TO:0000456 - spikelet number, TO:0000142 - secondary branching of inflorescence, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000467 - cell membrane stability, TO:0000050 - inflorescence branching","PO:0000230 - inflorescence meristem , PO:0001083 - inflorescence development stage ","Os01g0197700 ","LOC_Os01g10110.1",null,"Os03g0151800","Os02g0763000",1.6272846,0]
[{"$nulls":6},"Os03g0327100","LOC_Os03g21030",-1.2523727,"Os01g0788800","LOC_Os01g57890","HD-ZIP",1.2033843,null,"Os03g0315800",{"$nulls":8},"Os04g0507700","Os11g0543300","Os12g0548300","Os12g0548300",2.3556337,2.6423004,null,"Os01g0795400",6.3875213,"Os01g0824800",-2.187896,{"$nulls":17},"Os04g0672100",0,-1.2613779,{"$nulls":9},"WRKY73","OsWRKY73","WRKY GENE 73","Rice WRKY gene73",6," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0007568 - aging, GO:0009408 - response to heat, GO:0043565 - sequence-specific DNA binding, GO:0010150 - leaf senescence, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os06g0146250","LOC_Os06g05380.1","LOC_Os05g33570.2, LOC_Os05g33570.1","Os05g0463800","Os01g0718300","Os03g0232600",0,1.5340596,null,"_","OsWD40-17, OsLUGL, LUGL, KKX, OsKKX","_","LEUNIG-like transcriptional regulator, KAIKOUXIAO, LEUNIG-like, LEUNIG",1," Reproductive organ - panicle,  Seed - Morphological traits,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development, GO:0048449 - floral organ formation, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway","TO:0000485 - sterility related trait, TO:0000184 - seed anatomy and morphology trait, TO:0002672 - auxin content, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0006327 - spikelet meristem , PO:0025127 - primordium , PO:0025477 - floral organ primordium , PO:0000229 - flower meristem ","Os01g0607400","LOC_Os01g42260.4, LOC_Os01g42260.3, LOC_Os01g42260.2, LOC_Os01g42260.1",null,"Os08g0537800","Os08g0441500",2.016576,0,null,"MI","Mii, Mi1","MINUTE GRAIN","Minute grain, Minute grain-1",3," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length, TO:0000089 - panicle type, TO:0000181 - seed weight","PO:0009010 - seed , PO:0009049 - inflorescence ",null,null,"Os12g0155000","Os07g0605200","Os02g0805250",3.5810926,0,null,"XA20","xa20","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 20","Xanthomonas oryzae pv. oryzae resistance 20, Xanthomonas campestris pv. oryzae resistance-20, Xanthomonas oryzae pv. oryzae resistance-20",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os08g0537800","Os05g0272800","Os06g0336200",3.3541298,3.6744316,null,"GN1B","Gn1b","GRAIN NUMBER 1B","grain number 1b",1," Character as QTL - Yield and productivity","GO:0010229 - inflorescence development",{"$nulls":5},"Os08g0537800","Os03g0602300",1.5881429,0]
[{"$nulls":6},"Os01g0749300","LOC_Os01g54550",-1.2446251,"Os03g0198600","LOC_Os03g10210","HD-ZIP",1.6825858,null,"Os04g0659100",{"$nulls":8},"Os05g0419800","Os02g0782500","Os09g0481800","Os09g0481800",2.2251492,2.126032,null,"Os01g0226200",6.3769183,"Os04g0288500",-2.1872857,{"$nulls":17},"Os01g0871200",-1.379191,-1.065425,{"$nulls":9},"EYE1","eye1","EARLY YELLOWING 1","early yellowing 1",3," Vegetative organ - Leaf","GO:0015996 - chlorophyll catabolic process, GO:0010150 - leaf senescence",{"$nulls":4},"LOC_Os10g25780.3, LOC_Os10g25780.2, LOC_Os10g25780.1","Os05g0405000","Os04g0671900","Os06g0572400",2.8347607,1.5327787,null,"DRW1","OsWD40-166, WD40-166, OsDRW1","DWARF-RELATED WD40 PROTEIN 1 ","dwarf-related wd40 protein 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0045740 - positive regulation of DNA replication, GO:0006974 - response to DNA damage stimulus, GO:0070734 - histone H3-K27 methylation, GO:0010564 - regulation of cell cycle process, GO:0005634 - nucleus, GO:0045787 - positive regulation of cell cycle","TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000145 - internode length","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0006085 - root meristem , PO:0020148 - shoot apical meristem ","Os09g0241100","LOC_Os09g06560.1",null,"Os01g0229300","Os02g0648100",1.9717122,0,null,"FLO","flo(t)*, flo3","FLOURY ENDOSPERM","floury endosperm, floury endosperm 3, floury endosperm-3",4," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000196 - amylose content","PO:0009089 - endosperm ",null,null,"Os03g0637800","Os02g0811000","Os06g0205100",3.309496,0,null,"XA8","xa8","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 8","Xanthomonas oryzae pv. oryzae resistance 8, Xanthomonas campestris pv. oryzae resistance-8, Xanthomonas oryzae pv. oryzae resistance-8",7," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os06g0706400","Os03g0214200","Os05g0134400",3.1733818,3.6408613,null,"GN2","Gn2","GRAIN NUMBER 2","grain number 2",4," Character as QTL - Yield and productivity","GO:0010229 - inflorescence development",{"$nulls":5},"Os06g0706400","Os07g0603700",1.4216543,0]
[{"$nulls":6},"Os02g0673700","LOC_Os02g45200",-1.2354975,"Os04g0548700","LOC_Os04g46350","HD-ZIP",2.2563107,null,"Os04g0683700",{"$nulls":8},"Os06g0148200","Os12g0210400","Os06g0695700","Os06g0695700",2.1157606,1.3618697,null,"Os11g0302800",6.3742046,"Os04g0488100",-2.1838171,{"$nulls":17},"Os01g0905800",3.5656865,-0.97642773,{"$nulls":9},"HXK1","OsHXK1","HEXOKINASE-1","Hexokinase 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0009646 - response to absence of light, GO:0019318 - hexose metabolic process, GO:0009555 - pollen development, GO:0051321 - meiotic cell cycle, GO:0051607 - defense response to virus, GO:0043068 - positive regulation of programmed cell death, GO:0050687 - negative regulation of defense response to virus, GO:0009658 - chloroplast organization, GO:0009749 - response to glucose stimulus, GO:0042593 - glucose homeostasis, GO:0010150 - leaf senescence, GO:0005524 - ATP binding, GO:0004396 - hexokinase activity, GO:0006096 - glycolysis","TO:0002667 - abscisic acid content, TO:0000020 - black streak dwarf virus resistance, TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000300 - glucose content, TO:0000357 - growth and development trait","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage , PO:0001007 - pollen development stage ","Os07g0446800","LOC_Os07g26540.1","LOC_Os02g35970.1","Os01g0972200","Os01g0769700","Os04g0613700",0,1.5049185,null,"CYP714B2","CYP714B2","P-450 714B2","Cytochrome P450 714B2",3," Biochemical character,  Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0332100","LOC_Os03g21400.1, LOC_Os03g21419.1",null,"Os03g0200500","Os06g0203800",1.9706968,0,null,"GLUP3","glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3","GLUTELIN PRECURSOR 3","glutelin precursor3, glutelin precursor 3, glutelin precursor-3, vacuolar processing enzyme 1, legumain 3",4," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0006508 - proteolysis, GO:0045735 - nutrient reservoir activity, GO:0000327 - lytic vacuole within protein storage vacuole, GO:0008234 - cysteine-type peptidase activity","TO:0000429 - salt sensitivity, TO:0000109 - endosperm storage protein-2 content, TO:0000615 - abscisic acid sensitivity, TO:0000164 - stress trait, TO:0000490 - protein composition related trait","PO:0009089 - endosperm ","Os04g0537900","LOC_Os04g45470.1","Os03g0818800","Os03g0410700","Os10g0390500",3.2548683,0,null,"YDV","Ydv","YELLOW DWARF DISEASE RESISTANCE","Yellow dwarf disease resistance",null," Tolerance and resistance - Disease resistance","GO:0006952 - defense response","TO:0000292 - yellow dwarf disease resistance",{"$nulls":3},"Os02g0819100","Os01g0749200","Os10g0554800",5.6397414,3.6116307,null,"GN3","Gn3","GRAIN NUMBER 3","grain number 3",10," Character as QTL - Yield and productivity","GO:0010229 - inflorescence development",{"$nulls":5},"Os02g0819100","Os02g0494400",1.3357145,0]
[{"$nulls":6},"Os04g0567800","LOC_Os04g47990",-1.2354975,"Os06g0140700","LOC_Os06g04870","HD-ZIP",1.2395021,null,"Os07g0176900",{"$nulls":8},"Os06g0156600","Os07g0239400","Os04g0583200","Os04g0583200",2.0497277,1.7046095,null,"Os01g0750300",6.3130035,"Os11g0118400",-2.1817238,{"$nulls":17},"Os06g0522300",0,-2.3303158,{"$nulls":9},"ZIP3","OsZIP3","ZINC TRANSPORTER 3","zinc transporter 3, Zrt-Irt-like protein 3, Zinc-regulated transporter 3, zinc transporter OsZIP3",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006829 - zinc ion transport, GO:0046686 - response to cadmium ion, GO:0005739 - mitochondrion, GO:0005385 - zinc ion transmembrane transporter activity, GO:0010043 - response to zinc ion",null,"PO:0006016 - leaf epidermis , PO:0020104 - leaf sheath ","Os04g0613000","LOC_Os04g52310.1",null,"Os06g0107700","Os03g0640800","Os01g0972200",0,1.5007988,null,"MIR530","miR530, Osa-miR530, OsmiR530, osa-MIR530, osa-miR530 osa-miR530-3p, osa-miR530-5p","MICRORNA530","MICRORNA530, osa-miRNA530, os-miRNA530",4," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000391 - seed size, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000455 - seed set percent, TO:0000470 - vascular tissue related trait, TO:0000546 - peduncle top diameter, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0020103 - flag leaf , PO:0005004 - shoot node , PO:0009009 - plant embryo , PO:0009010 - seed ",{"$nulls":3},"Os02g0661500","Os02g0494000",1.9630948,0,null,"HPG1*","hpg1*, hpg1","HIGH PREPROGLUTELIN1","high preproglutelin1, high preproglutelin 1, high preproglutelin-1",4," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os04g0683700","Os01g0848400","Os05g0589700",3.202921,0,null,"ZLH1","Zlh1","ZIGZAG LEAFHOPPER RESISTANCE 1","Zigzag leafhopper resistance1, Zigzag leafhopper resistance 1, Zigzag leafhopper resistance-1",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000082 - zigzag leafhopper resistance",{"$nulls":3},"Os01g0350900","Os06g0662200","Os02g0203000",0,3.6010208,null,"GN4","Gn4","GRAIN NUMBER 4","grain number 4",12," Character as QTL - Yield and productivity","GO:0010229 - inflorescence development",{"$nulls":5},"Os01g0350900","Os02g0755000",1.2398332,0]
[{"$nulls":6},"Os06g0659100","LOC_Os06g44860",-1.209332,"Os08g0481400","LOC_Os08g37580","HD-ZIP",0.97592384,null,"Os08g0242700",{"$nulls":8},"Os06g0351500","Os01g0675800","Os05g0103200","Os05g0103200",2.04943,2.154865,null,"Os11g0592600",6.300508,"Os07g0158400",-2.1801736,{"$nulls":17},"Os01g0542700",-1.5437813,-1.0565652,{"$nulls":9},"GLN1;2","OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1, OsGS1-2, GS1-2, OsGS1.2, GS1.2","GLUTAMINE SYNTHETASE 1;2","cytosolic glutamine synthethase 1;2, cytosolic glutamine synthase 2, glutamine synthetase 1;2, glutamine synthetase 1",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0060359 - response to ammonium ion, GO:0009808 - lignin metabolic process, GO:0009691 - cytokinin biosynthetic process, GO:0019676 - ammonia assimilation cycle, GO:0006542 - glutamine biosynthetic process, GO:0050832 - defense response to fungus, GO:0010223 - secondary shoot formation, GO:0005524 - ATP binding, GO:0004356 - glutamate-ammonia ligase activity, GO:0005737 - cytoplasm, GO:0006529 - asparagine biosynthetic process, GO:0010150 - leaf senescence","TO:0000152 - panicle number, TO:0002660 - cytokinin content, TO:0000333 - sugar content, TO:0002673 - amino acid content, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000249 - leaf senescence","PO:0004709 - axillary bud , PO:0006343 - axillary shoot system , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage ","Os03g0223400","LOC_Os03g12290.1","LOC_Os08g40030.1","Os03g0778100","Os06g0103600","Os01g0174000",0,1.4943272,null,"IAGLU","OsIAGLU, OsIAAGLU, IAAGLU, OsIAGT1, IAGT1, UGT74A2, OsUGT74A2","IAA-GLUCOSE SYNTHASE","IAA-glucose synthase, indole-3-acetic acid glucosyltransferase, IAA-glycosyltransferase, UDP-glucosyltransferase 74A2",3," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle","GO:0005829 - cytosol, GO:0080026 - response to indolebutyric acid stimulus, GO:0008194 - UDP-glycosyltransferase activity, GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0009958 - positive gravitropism, GO:0016758 - transferase activity, transferring hexosyl groups, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0010601 - positive regulation of auxin biosynthetic process, GO:0010252 - auxin homeostasis, GO:0043231 - intracellular membrane-bounded organelle","TO:0000227 - root length, TO:0000346 - tiller number, TO:0002672 - auxin content, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000207 - plant height","PO:0025034 - leaf ","Os03g0693600 ","LOC_Os03g48740.1",null,"Os10g0403000","Os02g0218600",1.9261684,0,null,"RK1","rk1","ROUND KERNEL 1","round kernel1, round kernel-1",4," Seed - Morphological traits - Grain shape",null,"TO:0000287 - brown rice shape, TO:0000391 - seed size, TO:0000149 - seed width","PO:0009010 - seed ",null,null,"Os05g0139100","Os09g0570800","Os02g0450000",3.1121986,0,null,"ZLH2","Zlh2","ZIGZAG LEAFHOPPER RESISTANCE 2","Zigzag leafhopper resistance2, Zigzag leafhopper resistance 2, Zigzag leafhopper resistance-2",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000082 - zigzag leafhopper resistance",{"$nulls":3},"Os10g0508100","Os12g0113500","Os01g0919900",2.5134144,3.6005642,null,"GN5","Gn5","GRAIN NUMBER 5","grain number 5",12," Character as QTL - Yield and productivity","GO:0010229 - inflorescence development",{"$nulls":5},"Os10g0508100","Os10g0562700",1.1526028,0]
[{"$nulls":6},"Os06g0159900","LOC_Os06g06490",-1.2050422,"Os09g0447000","LOC_Os09g27450","HD-ZIP",-1.1042371,null,"Os11g0106700",{"$nulls":8},"Os07g0642200","Os05g0442700","Os12g0609500","Os12g0609500",2.0005157,1.5288626,null,"Os11g0189600",6.2954717,"Os02g0190300",-2.1796088,{"$nulls":17},"Os10g0515200",-3.4951484,-1.4838794,{"$nulls":9},"ND1","CSLD4, OsCSLD4, OsCD1, CD1, DNL3, NRL1","NARROW LEAF AND DWARF 1","CURLED LEAF AND DWARF 1, Dwarf and narrow-leaf 3, narrow and rolled leaf 1",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0009740 - gibberellic acid mediated signaling, GO:0000139 - Golgi membrane, GO:0030244 - cellulose biosynthetic process, GO:0051301 - cell division, GO:0007047 - cell wall organization, GO:0016760 - cellulose synthase (UDP-forming) activity, GO:0032502 - developmental process, GO:0016021 - integral to membrane, GO:0009739 - response to gibberellin stimulus","TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000370 - leaf width, TO:0000472 - vascular bundle number, TO:0000145 - internode length","PO:0009005 - root , PO:0020104 - leaf sheath ","Os12g0555600","LOC_Os12g36890.1","LOC_Os03g20780.1","Os07g0558500","Os03g0602300","Os01g0851000",0,1.4919344,null,"MIR1871","miR1871, osa-miR1871, osa-MIR1871","MICRORNA1871","MICRORNA1871, osa-miRNA1871",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0002679 - respiratory burst during defense response, GO:0009414 - response to water deprivation, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000371 - yield trait, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000152 - panicle number, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0025034 - leaf ",{"$nulls":3},"Os01g0720800","Os01g0507000",1.9223205,0,null,"SHO1","sho1, DCL4, OsDCL4, Os DCL4, Dcl4","SHOOT ORGANIZATION 1","shoot organization 1, shoot organization-1, shoot organization1, Endoribonuclease Dicer homolog 4, Dicer-like protein 4, Protein SHOOT ORGANIZATION 1, Oryza sativa dicer-like4, Oryza sativa dicer-like 4, Dicer like 4",4," Vegetative organ - Shoot apical meristem(SAM),  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development, GO:0004525 - ribonuclease III activity, GO:0009944 - polarity specification of adaxial/abaxial axis, GO:0007275 - multicellular organismal development, GO:0010492 - maintenance of shoot apical meristem identity, GO:0030145 - manganese ion binding, GO:0000287 - magnesium ion binding, GO:0010267 - production of ta-siRNAs involved in RNA interference, GO:0008026 - ATP-dependent helicase activity, GO:0003725 - double-stranded RNA binding, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0048608 - reproductive structure development, GO:0004252 - serine-type endopeptidase activity, GO:0005634 - nucleus","TO:0000074 - blast disease, TO:0000492 - leaf shape, TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0009025 - vascular leaf ","Os04g0509300","LOC_Os04g43050.4, LOC_Os04g43050.1","Os02g0831500","Os09g0459200","Os01g0659900",3.0577822,0,null,"ZLH3","Zlh3","ZIGZAG LEAFHOPPER RESISTANCE 3","Zigzag leafhopper resistance3, Zigzag leafhopper resistance 3, Zigzag leafhopper resistance-3",null," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000082 - zigzag leafhopper resistance",{"$nulls":3},"Os03g0183000","Os01g0279100","Os09g0482780",5.1618247,3.5369987,null,"GPA7","gpa7","GRAINS PER PANICLE 7","grains per panicle",7," Character as QTL - Yield and productivity","GO:0048281 - inflorescence morphogenesis",{"$nulls":5},"Os03g0183000","Os01g0927600",1.104102,0]
[{"$nulls":6},"Os10g0510500","LOC_Os10g36703",-1.1871086,"Os10g0480200","LOC_Os10g33960","HD-ZIP",0.966623,null,"Os12g0106000",{"$nulls":8},"Os09g0511700","Os06g0659100","Os10g0370500","Os10g0370500",1.9080826,1.3736,null,"Os11g0490600",6.2186036,"Os03g0582300",-2.1764817,{"$nulls":17},"Os07g0258400",0,-2.169833,{"$nulls":9},"SPL28","OsSPL28, PSL50, OsPSL50, AP1M1, OsAP1M1","SPOTTED LEAF 28","premature senescence leaf 50, AP-1 complex subunit mu 1, clathrin-associated adaptor protein complex 1 medium subunit mu 1, \\clathrin-associated adaptor protein complex 1, medium subunit mu 1 protein\\\"\"",1," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0060627 - regulation of vesicle-mediated transport, GO:0009408 - response to heat, GO:0016192 - vesicle-mediated transport, GO:0006886 - intracellular protein transport, GO:0010941 - regulation of cell death, GO:0010150 - leaf senescence, GO:0005794 - Golgi apparatus, GO:0006952 - defense response, GO:0043231 - intracellular membrane-bounded organelle, GO:0031410 - cytoplasmic vesicle, GO:0030131 - clathrin adaptor complex","TO:0000112 - disease resistance, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content, TO:0000259 - heat tolerance, TO:0000605 - hydrogen peroxide content","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os01g0703600","LOC_Os01g50770.1, LOC_Os01g50770.2","LOC_Os10g40730.1","Os04g0668900","Os02g0685900","Os02g0278700",0,1.4828542,null,"PME8","OsPME8","PECTIN METHYLESTERASE 8","pectin methylesterase 8",2," Biochemical character,  Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0042545 - cell wall modification, GO:0004857 - enzyme inhibitor activity, GO:0005618 - cell wall, GO:0030599 - pectinesterase activity, GO:0045330 - aspartyl esterase activity, GO:0043086 - negative regulation of catalytic activity","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0288100","LOC_Os02g18650.1",null,"Os07g0668900","Os06g0217300",1.9053074,0,null,"LKI1","lk i1, lki1, lk-i-1","LONG KERNEL IRAT13 1","IRAT 13' long grain1, IRAT 13' long grain 1, 'IRAT 13' long grain-1",4," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length","PO:0009010 - seed ",null,null,"Os01g0680200","Os02g0301100","Os01g0323100",2.9397247,0,null,"D2","d2, dwf2, CYP90D2, D2/CYP90D2, OsD2, SMG11, OsSMG11, D2/SMG11","DWARF EBISU","ebisu dwarf, dwarf-2, cytochrome P450 CYP90D2, Ebisu dwarf/Dwarf2, Dwarf2, SMALL GRAIN 11",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0016132 - brassinosteroid biosynthetic process, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007275 - multicellular organismal development, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009753 - response to jasmonic acid stimulus, GO:0016021 - integral to membrane, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000391 - seed size, TO:0000262 - panicle shape, TO:0000040 - panicle length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000567 - tiller angle, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000299 - leaf lamina color, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000132 - basal internode diameter",null,"Os01g0197100","LOC_Os01g10040.1, LOC_Os01g10040.2","Os06g0270900","Os06g0140700","Os04g0121100",5.7939086,3.5140316,null,"AGAP","OsAGAP","ARF-GTPASE-ACTIVATING PROTEIN","ARF-GTPase-activating protein, adenosine diphosphate ribosylation factor-GTPase-activating protein",2," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005543 - phospholipid binding, GO:0005096 - GTPase activator activity, GO:0008060 - ARF GTPase activator activity, GO:0005634 - nucleus, GO:0005737 - cytoplasm","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0009066 - anther , PO:0009039 - glume , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0009047 - stem , PO:0009005 - root ","Os02g0198300","LOC_Os02g10480.6, LOC_Os02g10480.5, LOC_Os02g10480.4, LOC_Os02g10480.3, LOC_Os02g10480.2, LOC_Os02g10480.1",null,"Os06g0270900","Os01g0949400",1.059483,0]
[{"$nulls":6},"Os05g0346200","LOC_Os05g27930",-1.1557907,"Os01g0733200","LOC_Os01g53220","HSF",-1.5364038,{"$nulls":10},"Os01g0773600","Os03g0823700","Os07g0226200","Os07g0226200",1.8982468,1.9527107,null,"Os08g0473600",6.2063766,"Os01g0919800",-2.1748767,{"$nulls":17},"Os12g0603800",0,-1.6109797,{"$nulls":9},"SG1","OsSG1, Sg1","SHORT GRAIN 1","SHORT GRAIN1, Short grain 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0008285 - negative regulation of cell proliferation, GO:0048316 - seed development","TO:0000397 - grain size, TO:0000370 - leaf width, TO:0000734 - grain length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000326 - leaf color, TO:0002677 - brassinosteroid sensitivity, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage ","Os09g0459200","LOC_Os09g28520.1",null,"Os02g0731700","Os03g0157300","Os05g0567300",1.3482547,1.4644338,null,"_","DWF1, DIM/DWF1, DIM","_",null,4," Biochemical character,  Reproductive organ - panicle","GO:0009055 - electron carrier activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0005506 - iron ion binding, GO:0010229 - inflorescence development, GO:0020037 - heme binding, GO:0004497 - monooxygenase activity","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os04g0570500","LOC_Os04g48200.1",null,"Os05g0498900","Os02g0787200",1.8705875,0,null,"D11","d11(d8), dwf10, d8, D11/CYP724B1, d11, CYP724B1, GNS4, OsD11, PMM1, OsPMM1, PMM1/D11, NBG4, OsCPB1, CPB1, CPB1/D11","DWARF SHINKANEAIKOKU OR NOHRIN 28","shinkaneaikoku or nohrin 28 dwarf, DWARF SHINKANEAIKOKU OR NOHRIN 28, OsDWARF11, dwarf-11, Cytochrome P450 724B1, Dwarf protein 11, cytochrome P450 CYP724B1, DWARF11, grain number and size on chromosome 4, Panicle Morphology Mutant 1, Notched Belly Grain 4, CLUSTERED PRIMARY BRANCH 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0022900 - electron transport chain, GO:0006879 - cellular iron ion homeostasis, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling, GO:0048573 - photoperiodism, flowering, GO:0010029 - regulation of seed germination, GO:0051512 - positive regulation of unidimensional cell growth, GO:0016020 - membrane, GO:0009055 - electron carrier activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009826 - unidimensional cell growth, GO:0006826 - iron ion transport, GO:0009647 - skotomorphogenesis, GO:0008199 - ferric iron binding, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000206 - leaf angle, TO:0000455 - seed set percent, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000484 - seed shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000592 - 1000-dehulled grain weight, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000371 - yield trait, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0002730 - grain shape, TO:0000052 - primary branching of inflorescence, TO:0000396 - grain yield, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000456 - spikelet number, TO:0000391 - seed size, TO:0000329 - tillering ability, TO:0000397 - grain size, TO:0000139 - grains per panicle, TO:0000641 - primary branch length, TO:0000557 - secondary branch number, TO:0000501 - spikelet weight, TO:0000050 - inflorescence branching, TO:0000576 - stem length, TO:0000207 - plant height","PO:0020142 - stem internode , PO:0020122 - inflorescence axis , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009010 - seed , PO:0006321 - primary inflorescence branch ","Os04g0469800","LOC_Os04g39430.2, LOC_Os04g39430.1","Os02g0716500","Os08g0159500","Os11g0556400",2.710288,0,null,"OC1","Oc1*, Oc1, OC-I, SPOC-I, OsCP1, Oc, OCI, OsCYS1, OsPR6b, PR6b","ORYZACYSTATIN 1","Oryzacystatin1, Oryzacystatin-1, Oryzacystatin I, Oryzacystatin-I, Cysteine proteinase inhibitor 1, cystatin-I, oryzacystatin, Pathogenesis related gene 6b",1," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009617 - response to bacterium, GO:0042742 - defense response to bacterium, GO:0009738 - abscisic acid mediated signaling, GO:0004869 - cysteine-type endopeptidase inhibitor activity, GO:0005576 - extracellular region, GO:0006952 - defense response, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030414 - peptidase inhibitor activity","TO:0000054 - animal damage resistance, TO:0000432 - temperature response trait, TO:0000175 - bacterial blight disease resistance",null,"Os01g0803200","LOC_Os01g58890.4, LOC_Os01g58890.3, LOC_Os01g58890.2, LOC_Os01g58890.1","Os08g0120000","Os06g0572400","Os01g0897300",5.4734015,3.5020783,null,"SGD2","HOX3, Oshox3, OsHox3","SMALL GRAIN AND DWARF 2","rice homeobox gene 3, Homeobox-leucine zipper protein HOX3, Homeodomain transcription factor HOX3, HD-ZIP protein HOX3, Small Grain and Dwarf 2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0030371 - translation repressor activity, GO:0016049 - cell growth, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0002675 - gibberellic acid content, TO:0002689 - leaf sheath length, TO:0000207 - plant height, TO:0000241 - leaf number, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000346 - tiller number, TO:0006020 - shoot apical meristem development, TO:0000734 - grain length","PO:0009005 - root , PO:0020141 - stem node , PO:0025395 - floral organ ","Os01g0643600","LOC_Os01g45570.1",null,"Os08g0120000","Os02g0768600",0.9773137,0]
[{"$nulls":6},"Os10g0516500","LOC_Os10g37240",-1.1469765,"Os01g0749300","LOC_Os01g54550","HSF",-1.2446251,{"$nulls":10},"Os06g0683300","Os02g0504000","Os07g0164200","Os07g0164200",1.8817979,1.8467737,null,"Os03g0187350",6.178833,"Os03g0194600",-2.172973,{"$nulls":17},"Os01g0210200",0,-1.366676,{"$nulls":9},"SWEET5","OsSWEET5","SWEET5",null,5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root","GO:0051119 - sugar transmembrane transporter activity, GO:0034219 - carbohydrate transmembrane transport, GO:0016021 - integral to membrane, GO:0015757 - galactose transport, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0010150 - leaf senescence, GO:0009739 - response to gibberellin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009734 - auxin mediated signaling pathway, GO:0005886 - plasma membrane, GO:0005887 - integral to plasma membrane","TO:0000207 - plant height, TO:0000333 - sugar content, TO:0002672 - auxin content, TO:0000227 - root length, TO:0000166 - gibberellic acid sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os05g0588500","LOC_Os05g51090.1","LOC_Os01g45570.1","Os03g0786400","Os03g0294700","Os07g0525100",0,1.456244,null,"_","OsDOG1L-2, DOG1L-2","_","OsDOG1-like-2, DOG1-like-2",1," Reproductive organ - panicle,  Other","GO:0006351 - transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0159000","LOC_Os01g06560.1, LOC_Os01g06560.2",null,"Os06g0270900","Os01g0769700",1.675939,0,null,"SH3","Sh3","SHATTERING 3","Shattering3, Shattering 3, Shattering-3",4," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering","PO:0009010 - seed ",null,null,"Os06g0267500","Os02g0648100","Os06g0548200",2.6934898,0,null,"PIT","Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59","PYRICULARIA ORYZAE RESISTANCE T","Pyricularia oryzae resistance-t, Magnaporthe grisea resistance-t, Blast resistance 5",1," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000520 - stomatal closure rate","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ","Os01g0149600","LOC_Os01g05630.1","Os01g0142300","Os01g0343300","Os10g0533500",0,3.4932086,null,"HOX4","Oshox4, OsHox4","HOMEOBOX GENE 4","rice homeobox gene 4, Homeobox-leucine zipper protein HOX4, Homeodomain transcription factor HOX4, HD-ZIP protein HOX4, HOMEOBOX4",9," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0009685 - gibberellin metabolic process, GO:0003677 - DNA binding","TO:0000346 - tiller number, TO:0000207 - plant height",null,"Os09g0470500","LOC_Os09g29460.1",null,"Os01g0142300","Os01g0885000",0.9633527,0]
[{"$nulls":6},"Os01g0239100","LOC_Os01g13760",-1.1356636,"Os05g0530400","LOC_Os05g45410","HSF",-1.9081851,{"$nulls":10},"Os04g0513900","Os09g0539200","Os06g0725300","Os06g0725300",1.8658906,2.522997,null,"Os10g0407200",6.170794,"Os07g0258400",-2.169833,{"$nulls":17},"Os03g0183200",-3.8856087,-1.6938057,{"$nulls":9},"SAUR45","OsSAUR45","SMALL AUXIN-UP RNA 45","Small auxin-up RNA 45",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root","GO:0009733 - response to auxin stimulus, GO:0005737 - cytoplasm, GO:0009926 - auxin polar transport, GO:0009851 - auxin biosynthetic process, GO:0080022 - primary root development, GO:0048366 - leaf development, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009734 - auxin mediated signaling pathway, GO:0009736 - cytokinin mediated signaling, GO:0048367 - shoot development, GO:0009735 - response to cytokinin stimulus","TO:0000654 - shoot development trait, TO:0006036 - stem elongation, TO:0000576 - stem length, TO:0000167 - cytokinin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000655 - leaf development trait, TO:0000656 - root development trait, TO:0000180 - spikelet fertility, TO:0000370 - leaf width, TO:0001006 - adventitious root number, TO:0000227 - root length, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0002672 - auxin content","PO:0001052 - 2 leaf expansion stage , PO:0001031 - 4 root elongation stage , PO:0007089 - stem elongation stage ","Os09g0546100","LOC_Os09g37400.1","LOC_Os05g03884.1","Os03g0112900","Os09g0555500","Os03g0235900",0,1.3953772,null,"EIF3E","eIF-3e, OseIF3e","EUKARYOTIC INITIATION FACTOR 3E","Eukaryotic translation initiation factor 3 subunit e",7," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0010152 - pollen maturation, GO:0010555 - response to mannitol stimulus, GO:0006446 - regulation of translational initiation, GO:0005852 - eukaryotic translation initiation factor 3 complex, GO:0003743 - translation initiation factor activity, GO:0001731 - formation of translation preinitiation complex, GO:0016282 - eukaryotic 43S preinitiation complex, GO:0033290 - eukaryotic 48S preinitiation complex","TO:0000269 - 100-seed weight, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000399 - grain thickness, TO:0000040 - panicle length, TO:0000262 - panicle shape, TO:0000207 - plant height, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000734 - grain length, TO:0000456 - spikelet number",null,"Os07g0222300","LOC_Os07g12110.1",null,"Os08g0120000","Os03g0640800",1.6751747,0,null,"FLO2","flo2, flo3(t), Osflo2, Osflo3(t), Osflo-2, flo-2","FLOURY ENDOSPERM 2","floury endosperm2, floury endosperm 2, floury endosperm-2, Floury 2",4," Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0005976 - polysaccharide metabolic process, GO:0005829 - cytosol, GO:0009085 - lysine biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009568 - amyloplast starch grain","TO:0000162 - seed quality, TO:0000615 - abscisic acid sensitivity, TO:0000104 - floury endosperm, TO:0000490 - protein composition related trait, TO:0000196 - amylose content, TO:0000266 - chalky endosperm, TO:0000397 - grain size, TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000105 - dull endosperm","PO:0009089 - endosperm ","Os04g0645100","LOC_Os04g55230.1","Os01g0165200","Os06g0203800","Os07g0500300",2.6447735,0,null,"SALT","salT*(sal1), SalT1*, sal1, Sal1, SALT, ML, SalT, OsSalT, OsJRL, JRL, Osl43, OsL43, OsMBL1, MBL1","SALT PROTEIN","salt tolerance, Salt tolerance-1, Salt stress-induced protein, Salt protein, Protein lectin-like, Protein mannose-binding lectin, 15 kda organ-specific salt-induced protein, Orysata, jacalin-related mannose-binding lectin, Mannose-Binding Lectin 1",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0010288 - response to lead ion, GO:0010200 - response to chitin, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0002237 - response to molecule of bacterial origin, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0046686 - response to cadmium ion, GO:0002238 - response to molecule of fungal origin, GO:0010038 - response to metal ion, GO:0002213 - defense response to insect, GO:0046689 - response to mercury ion","TO:0000429 - salt sensitivity, TO:0000074 - blast disease, TO:0000608 - sodium content, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000034 - chromium sensitivity, TO:0000276 - drought tolerance, TO:0000432 - temperature response trait, TO:0000261 - insect damage resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ","Os01g0348900","LOC_Os01g24710.4, LOC_Os01g24710.1, LOC_Os01g24710.2, LOC_Os01g24710.3","Os08g0174700","Os02g0137200","Os12g0530100",0,3.463534,null,"IPT1","OsIPT1","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 1","adenosine phosphate isopentenyltransferase 1, isopentenyltransferase 1",3," Biochemical character,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0008033 - tRNA processing, GO:0009691 - cytokinin biosynthetic process, GO:0009824 - adenylate dimethylallyltransferase activity, GO:0005737 - cytoplasm, GO:0016740 - transferase activity","TO:0000456 - spikelet number, TO:0000011 - nitrogen sensitivity",{"$nulls":4},"Os08g0174700","Os07g0497100",-0.9551296,0]
[{"$nulls":6},"Os03g0852300","LOC_Os03g63530",-1.1165094,"Os08g0163800","LOC_Os08g06659","LBD",-1.6463923,{"$nulls":10},"Os09g0491100","Os03g0194600","Os03g0359600","Os03g0359600",1.757352,3.041989,null,"Os08g0178500",6.1633835,"Os03g0764900",-2.1698039,{"$nulls":17},"Os05g0346200",0,-1.1557907,{"$nulls":9},"WRKY113","OsWRKY113","WRKY GENE 113",null,6," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0002237 - response to molecule of bacterial origin, GO:0050832 - defense response to fungus, GO:0010039 - response to iron ion, GO:0009863 - salicylic acid mediated signaling pathway, GO:0006952 - defense response","TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0006001 - salt tolerance, TO:0000074 - blast disease","PO:0001054 - 4 leaf senescence stage ","Os06g0158100","LOC_Os06g06360.1","LOC_Os04g38720.1","Os03g0843300","Os03g0305500","Os05g0405000",0,1.3920685,null,"PPR676","OsPPR676, OsATP4, ATP4","PENTATRICOPEPTIDE REPEAT PROTEIN 676","pentatricopeptide repeat protein 676",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009516 - leucoplast, GO:0009509 - chromoplast, GO:0009555 - pollen development, GO:0009657 - plastid organization, GO:0009409 - response to cold, GO:0016556 - mRNA modification, GO:0019252 - starch biosynthetic process, GO:0016051 - carbohydrate biosynthetic process, GO:0016554 - cytidine to uridine editing, GO:0006633 - fatty acid biosynthetic process, GO:0040007 - growth, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0048653 - anther development, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000135 - leaf length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000371 - yield trait, TO:0000370 - leaf width, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0000326 - leaf color, TO:0002714 - plastid development trait, TO:0000053 - pollen sterility","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0025313 - tapetum ","Os03g0215900","LOC_Os03g11670.1",null,"Os08g0112700","Os07g0693000",1.5852586,0,null,"GLUP4","glup4(esp8), esp8, glup4, OsRab5B2, Rab5a, OsRab5a, GPA1/Rab5a, GPA, GLUP4/Rab5, GLUP4/Rab5a, GPA1, OsGPA1","GLUTELIN PRECURSOR 4","glutelin precursor4, glutelin precursor 4, glutelin precursor-4, small GTP-binding protein OsRab5B2, small GTP-binding protein OsRab5a, glutelin precursor mutant4, glutelin precursor accumulation 1",12," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0006970 - response to osmotic stress, GO:0045735 - nutrient reservoir activity, GO:0016197 - endosome transport, GO:0051028 - mRNA transport, GO:0007264 - small GTPase mediated signal transduction, GO:0005768 - endosome, GO:0016482 - cytoplasmic transport, GO:0005525 - GTP binding, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0015031 - protein transport","TO:0000490 - protein composition related trait, TO:0006001 - salt tolerance, TO:0000109 - endosperm storage protein-2 content, TO:0000095 - osmotic response sensitivity","PO:0009010 - seed ","Os12g0631100","LOC_Os12g43550.2, LOC_Os12g43550.1","Os02g0683500","Os07g0627000","Os09g0241100",2.641684,0,null,"TPI","tpi*, tips, TI, OsTPI1, TPI1, OsTPI1.1, OsTPI1.2","TRIOSEPHOSPHATE ISOMERASE","triosephosphate isomerase (cloned gene), triosephosphate isomerase, Triosephosphate isomerase, cytosolic, Triose-phosphate isomerase, triosephosphate isomerase-2, Cytosolic Triosephosphate lsomerase, Triose-phosphate isomerase",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0004807 - triose-phosphate isomerase activity, GO:0006098 - pentose-phosphate shunt, GO:0006096 - glycolysis, GO:0006633 - fatty acid biosynthetic process, GO:0006094 - gluconeogenesis",null,null,"Os01g0147900","LOC_Os01g05490.2, LOC_Os01g05490.1","Os04g0656100","Os09g0551600","Os04g0233400",4.3566394,3.4536438,null,"IPT2","OsIPT2","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 2","adenosine phosphate isopentenyltransferase 2, isopentenyltransferase 2",3," Biochemical character,  Character as QTL - Yield and productivity","GO:0009824 - adenylate dimethylallyltransferase activity, GO:0005524 - ATP binding, GO:0008033 - tRNA processing, GO:0005737 - cytoplasm, GO:0009691 - cytokinin biosynthetic process, GO:0016740 - transferase activity","TO:0000456 - spikelet number, TO:0000011 - nitrogen sensitivity",null,"Os03g0356900 ","LOC_Os03g24240.1",null,"Os04g0656100","Os03g0757500",-0.96391296,0]
[{"$nulls":6},"Os06g0318600","LOC_Os06g21380",-1.1053046,"Os06g0712700","LOC_Os06g49840","MIKC_MADS",1.468964,{"$nulls":10},"Os04g0474500","Os01g0949750","Os03g0823400","Os03g0823400",1.7249632,1.0985451,null,"Os01g0313600",6.1607804,"Os04g0370900",-2.1680458,{"$nulls":17},"Os07g0633200",-2.770459,-1.363359,{"$nulls":9},"JAR1","OsJAR1, OsGH3.5, GH3.5, OsGH3-5, GH3-5","JASMONYL-L-ISOLEUCINE SYNTHASE 1","jasmonyl-L-isoleucine synthase 1, JASMONATE RESISTANT 1, GRETCHEN HAGEN 3.5",5," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009585 - red, far-red light phototransduction, GO:0010119 - regulation of stomatal movement, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010193 - response to ozone, GO:0031348 - negative regulation of defense response, GO:0070566 - adenylyltransferase activity, GO:0050832 - defense response to fungus, GO:0009901 - anther dehiscence, GO:0009734 - auxin mediated signaling pathway, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0009861 - jasmonic acid and ethylene-dependent systemic resistance, GO:0009640 - photomorphogenesis, GO:0009694 - jasmonic acid metabolic process, GO:0005773 - vacuole, GO:0009507 - chloroplast, GO:0009753 - response to jasmonic acid stimulus, GO:0009627 - systemic acquired resistance, GO:0009733 - response to auxin stimulus, GO:0080123 - jasmonate-amino synthetase activity, GO:0006952 - defense response, GO:0009695 - jasmonic acid biosynthetic process, GO:0052315 - phytoalexin biosynthetic process, GO:0046688 - response to copper ion, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000206 - leaf angle, TO:0000172 - jasmonic acid sensitivity, TO:0000609 - potassium content, TO:0000164 - stress trait, TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000074 - blast disease, TO:0002669 - diterpenoid phytoalexin content, TO:0002668 - jasmonic acid content, TO:0000179 - biotic stress trait, TO:0000420 - fertility related trait, TO:0000474 - glume opening, TO:0000021 - copper sensitivity, TO:0006001 - salt tolerance","PO:0007616 - flowering stage , PO:0009066 - anther , PO:0009006 - shoot system ","Os05g0586200 ","LOC_Os05g50890.1, LOC_Os05g50890.3, LOC_Os05g50890.2","LOC_Os06g23650.1","Os10g0419400","Os06g0724900","Os02g0562700",0,1.3901037,null,"NAL21","cyc07, T151, OsNAL21, OsRPS3A, RPS3A, RPS3aA, OsRPS3aA","NARROW LEAF 21","narrow leaf21, ribosomal protein S3A",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009965 - leaf morphogenesis, GO:0010482 - regulation of epidermal cell division, GO:0009733 - response to auxin stimulus, GO:0003735 - structural constituent of ribosome, GO:0051302 - regulation of cell division, GO:0005783 - endoplasmic reticulum, GO:0005840 - ribosome, GO:0006413 - translational initiation, GO:0032790 - ribosome disassembly, GO:0042255 - ribosome assembly, GO:0001558 - regulation of cell growth, GO:0048366 - leaf development, GO:0045727 - positive regulation of translation, GO:0006412 - translation, GO:0022627 - cytosolic small ribosomal subunit","TO:0000470 - vascular tissue related trait, TO:0000146 - seed length, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000135 - leaf length, TO:0000370 - leaf width","PO:0000055 - bud , PO:0000016 - lateral root primordium , PO:0000025 - root tip , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001050 - leaf development stage ","Os03g0200500","LOC_Os03g10340.1",null,"Os03g0839900","Os05g0537300",1.5812794,0,null,"PRO2","Pro2*, Pro2","PROLAMIN 2","Prolamin2, Prolamin 2, Prolamin-2",5," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os03g0308200","Os06g0194900","Os03g0340500",2.476517,0,null,"RD","Rd, DFR, OsDFR, OS-DFR","RED PERICARP AND SEED COAT","Red pericarp and seed coat, dihydroflavonol 4-reductase, dihydroflavonol-4-reductase",1," Biochemical character,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0003824 - catalytic activity, GO:0009416 - response to light stimulus, GO:0009813 - flavonoid biosynthetic process, GO:0010023 - proanthocyanidin biosynthetic process, GO:0002213 - defense response to insect, GO:0051555 - flavonol biosynthetic process, GO:0044237 - cellular metabolic process, GO:0043473 - pigmentation, GO:0005634 - nucleus, GO:0050662 - coenzyme binding, GO:0048316 - seed development, GO:0009718 - anthocyanin biosynthetic process, GO:0009812 - flavonoid metabolic process, GO:0009408 - response to heat","TO:0000706 - hull color, TO:0000185 - stigma color, TO:0000205 - white-backed planthopper resistance, TO:0000190 - seed coat color, TO:0000259 - heat tolerance, TO:0000653 - seed development trait, TO:0000486 - seed color, TO:0000487 - endosperm color, TO:0000140 - apiculus color, TO:0000075 - light sensitivity, TO:0000326 - leaf color, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color","PO:0006033 - paleal apiculus , PO:0009073 - stigma , PO:0009088 - seed coat , PO:0009089 - endosperm , PO:0001170 - seed development stage ","Os01g0633500","LOC_Os01g44260.1","Os08g0109300","Os06g0130100","Os02g0726300",2.4783533,3.431485,null,"IPT3","OsIPT3","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 3","adenosine phosphate isopentenyltransferase 3, isopentenyltransferase 3",5," Biochemical character,  Character as QTL - Yield and productivity","GO:0009691 - cytokinin biosynthetic process, GO:0005524 - ATP binding, GO:0009824 - adenylate dimethylallyltransferase activity, GO:0005737 - cytoplasm, GO:0006400 - tRNA modification, GO:0005739 - mitochondrion, GO:0052381 - tRNA dimethylallyltransferase activity, GO:0016740 - transferase activity, GO:0008033 - tRNA processing","TO:0000011 - nitrogen sensitivity, TO:0000456 - spikelet number",null,"Os05g0311801",null,null,"Os08g0109300","Os11g0544600",-0.98757154,0]
[{"$nulls":6},"Os09g0447000","LOC_Os09g27450",-1.1042371,"Os01g0128000","LOC_Os01g03720","MYB",-1.60054,{"$nulls":10},"Os08g0509400","Os02g0572900","Os08g0414700","Os08g0414700",1.69453,2.293911,null,"Os11g0179000",6.0542827,"Os11g0702900",-2.153173,{"$nulls":17},"Os03g0725200",3.7773674,-2.226667,{"$nulls":9},"ASN1","OsASN1, OsAS1, AS1","ASPARAGINE SYNTHETASE 1","asparagine synthetase 1, Asparagine Synthetase1",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity, GO:0060359 - response to ammonium ion, GO:0010150 - leaf senescence, GO:0006529 - asparagine biosynthetic process","TO:0002673 - amino acid content, TO:0000249 - leaf senescence","PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0000071 - companion cell ","Os03g0291500","LOC_Os03g18130.1, LOC_Os03g18130.2, LOC_Os03g18130.3, LOC_Os03g18130.4","LOC_Os01g74110.1","Os08g0556900","Os03g0109400","Os01g0233000",1.0222086,1.3461937,null,"_",null,"_",null,10," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0010229 - inflorescence development, GO:0043531 - ADP binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0370100","LOC_Os10g22484.1, LOC_Os10g22484.2, LOC_Os10g22484.3",null,"Os04g0656100","Os05g0285900",1.580932,0,null,"PRO3","Pro3*, Pro3","PROLAMIN 3","Prolamin3, Prolamin 3, Prolamin-3",5," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os02g0189100","Os01g0507000","Os05g0387700",2.4045897,0,null,"SD1","sd1, sd1 (d47, sd1-d, sd1-1), d49(sd1-r), d47, C20OX2, OsGA20ox-2, OsGA20ox2, GA20ox-2, GA20OX2, GA20ox2, sd-1, SD1-ja, SD1-in, sd1-2, Sd-1, GA20, 20ox2, Os20ox2","SEMIDWARF 1","dee-geo-woo-gen dwarf(sd1-d), green revolution gene, semidwarf-1, GA C20oxidase2, semidwarf-1, reimei dwarf(sd1-r), Calrose76(sd1-3), Jikkoku(sd1-2). rice GA 20-oxidase2, GA 20-oxidase 2, Gibberellin 20 oxidase 2, Gibberellin C-20 oxidase 2, GA 20-oxidase 2, Protein semidwarf-1, semi-dwarf1",1," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0080006 - internode patterning, GO:0030912 - response to deep water, GO:0055114 - oxidation reduction, GO:0009826 - unidimensional cell growth, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0009686 - gibberellin biosynthetic process, GO:0048573 - photoperiodism, flowering, GO:0009628 - response to abiotic stimulus, GO:0045544 - gibberellin 20-oxidase activity, GO:0016491 - oxidoreductase activity","TO:0002616 - flowering time, TO:0000599 - enzyme activity, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002675 - gibberellic acid content, TO:0000401 - plant growth hormone sensitivity, TO:0000524 - submergence tolerance, TO:0000576 - stem length","PO:0009047 - stem , PO:0020142 - stem internode ","Os01g0883800","LOC_Os01g66100.1","Os05g0395300","Os11g0242800","Os01g0284500",0,3.4000788,null,"IPT4","OsIPT4","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 4","adenosine phosphate isopentenyltransferase 4, isopentenyltransferase 4, ISOPENTENYL-TRANSFERASE 4",3," Biochemical character,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0005524 - ATP binding, GO:0009691 - cytokinin biosynthetic process, GO:0060359 - response to ammonium ion, GO:0008033 - tRNA processing, GO:0016740 - transferase activity, GO:0009824 - adenylate dimethylallyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0010167 - response to nitrate","TO:0000456 - spikelet number, TO:0000163 - auxin sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009005 - root ","Os03g0810100 ","LOC_Os03g59570.1",null,"Os05g0395300","Os07g0681500",-1.0149541,0]
[{"$nulls":6},"Os04g0445600","LOC_Os04g36790",-1.0994588,"Os01g0274800","LOC_Os01g16810","MYB",-0.993018,{"$nulls":10},"Os11g0683500","Os03g0818800","Os05g0319700","Os05g0319700",1.6353216,2.3925202,null,"Os02g0700700",6.0517774,"Os11g0182500",-2.1526005,{"$nulls":17},"Os08g0473900",3.8398027,3.305474,{"$nulls":9},"_","OsGLN1;3, GLN1;3, OsGS1;3, GS1;3","_","cytosolic glutamine synthase 3, cytosolic glutamine synthethase 1;3, GLUTAMINE SYNTHETASE 1;3, glutamine synthetase 1;3",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0022626 - cytosolic ribosome, GO:0005524 - ATP binding, GO:0004356 - glutamate-ammonia ligase activity, GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0005507 - copper ion binding, GO:0009507 - chloroplast, GO:0006542 - glutamine biosynthetic process, GO:0009399 - nitrogen fixation","TO:0000430 - germination rate, TO:0000249 - leaf senescence","PO:0009051 - spikelet , PO:0001054 - 4 leaf senescence stage ","Os03g0712800","LOC_Os03g50490.1",null,"Os01g0680200","Os09g0565200","Os03g0308200",0,1.3246378,null,"PUP1","OsPUP1","PURINE PERMEASE 1","purine permease 1, PUP-type cytokinin transporter 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0010184 - cytokinin transport, GO:0015211 - purine nucleoside transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum","TO:0000040 - panicle length, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000346 - tiller number, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002689 - leaf sheath length, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000590 - grain weight","PO:0001083 - inflorescence development stage , PO:0005417 - phloem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0000034 - vascular system , PO:0009005 - root ","Os03g0187800","LOC_Os03g08880.1",null,"Os04g0576300","Os03g0157300",1.5712484,0,null,"PRO5","Pro5*, Pro5","PROLAMIN 5","Prolamin5, Prolamin 5, Prolamin-5",5," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os03g0841800","Os02g0819400","Os07g0605200",2.3901968,0,null,"D10","d10(d15,d16), d16, d15, dwf9, d10, OsCCD8b, OsCCD8, CCD8, OsD10","DWARF 'KIKEIBANSHINRIKI OR TOYOHIKARIBUNWAI TILLERING","kikeibanshinriki or toyohikaribunwai tillering dwarf, dwarf-10, carotenoid cleavage dioxygenase 8, DWARF 10, DWARF10, carotenoid cleavage dioxygenase 8b",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009570 - chloroplast stroma, GO:0009507 - chloroplast, GO:0007623 - circadian rhythm, GO:0010223 - secondary shoot formation, GO:0042594 - response to starvation, GO:0046685 - response to arsenic, GO:0009965 - leaf morphogenesis, GO:0009826 - unidimensional cell growth, GO:0009735 - response to cytokinin stimulus, GO:0016121 - carotene catabolic process, GO:0009926 - auxin polar transport, GO:0009733 - response to auxin stimulus, GO:0009691 - cytokinin biosynthetic process, GO:0030154 - cell differentiation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0016124 - xanthophyll catabolic process, GO:0046872 - metal ion binding","TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000145 - internode length, TO:0001016 - relative chlorophyll content, TO:0001013 - lateral root number, TO:0002688 - leaf lamina joint bending, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000476 - growth hormone content, TO:0000167 - cytokinin sensitivity, TO:0000136 - relative water content, TO:0002660 - cytokinin content, TO:0000011 - nitrogen sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000339 - stem thickness, TO:0000326 - leaf color, TO:0000586 - seminal root length","PO:0009006 - shoot system , PO:0020142 - stem internode , PO:0006343 - axillary shoot system , PO:0009047 - stem , PO:0009049 - inflorescence ","Os01g0746400","LOC_Os01g54270.1","Os04g0106300","Os09g0442100","Os09g0346500",0,3.3939323,null,"IPT7","OsIPT7","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 7","adenosine phosphate isopentenyltransferase 7, isopentenyltransferase 7",5," Biochemical character,  Character as QTL - Yield and productivity","GO:0009824 - adenylate dimethylallyltransferase activity, GO:0009691 - cytokinin biosynthetic process, GO:0008033 - tRNA processing, GO:0005739 - mitochondrion, GO:0009733 - response to auxin stimulus, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0005524 - ATP binding, GO:0016740 - transferase activity","TO:0000456 - spikelet number, TO:0000011 - nitrogen sensitivity, TO:0000163 - auxin sensitivity",null,"Os05g0551700 ","LOC_Os05g47840.1",null,"Os04g0106300","Os01g0922800",-1.0300881,0]
[{"$nulls":6},"Os07g0678600","LOC_Os07g48100",-1.0833645,"Os01g0305900","LOC_Os01g19970","MYB",1.7271547,{"$nulls":10},"Os09g0511900","Os02g0182100","Os01g0894700","Os01g0894700",1.5070692,1.815704,null,"Os04g0442300",6.0132713,"Os10g0180800",-2.148242,{"$nulls":17},"Os01g0360200",0,3.1213465,{"$nulls":9},"GLT2","OsGLT2, OsNADH-GOGAT2, NADH-GOGAT2, OsGOGAT2, OsGLU2","NADH-DEPENDENT GLUTAMATE SYNTHASE 2","NADH-glutamate synthase 2, NADH-dependent glutamate synthase2, NADH-dependent glutamate synthase 2",5," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010157 - response to chlorate, GO:0046686 - response to cadmium ion, GO:0010167 - response to nitrate, GO:0006541 - glutamine metabolic process, GO:0009570 - chloroplast stroma, GO:0019676 - ammonia assimilation cycle, GO:0010181 - FMN binding, GO:0006537 - glutamate biosynthetic process, GO:0016040 - glutamate synthase (NADH) activity, GO:0010150 - leaf senescence, GO:0051538 - 3 iron, 4 sulfur cluster binding, GO:0050660 - FAD binding, GO:0005506 - iron ion binding","TO:0000249 - leaf senescence, TO:0000456 - spikelet number","PO:0009047 - stem , PO:0000048 - leaf lamina vascular system , PO:0001054 - 4 leaf senescence stage ","Os05g0555600","LOC_Os05g48200.1",null,"Os08g0435900","Os01g0757200","Os05g0447200",1.8482307,1.2837814,null,"OXO4","OsOxO4, OsGLP3-6, GLP3-6","OXALATE OXIDASE 4","oxalate oxidase 4, german-like protein 3-6",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0030912 - response to deep water, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009738 - abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000286 - submergence sensitivity, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000255 - sheath blight disease resistance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance, TO:0000477 - panicle blast disease resistance","PO:0005052 - plant callus , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0007073 - 2 formation of axillary shoot stage , PO:0007014 - booting stage , PO:0025034 - leaf , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009006 - shoot system ","Os03g0694000","LOC_Os03g48780.1",null,"Os01g0889400","Os03g0294700",1.5126151,0,null,"RK3","Rk3","ROUND KERNEL 3","Round kernel3, Round kernel 3, Round kernel-3",5," Seed - Morphological traits - Grain shape",null,"TO:0000391 - seed size, TO:0000287 - brown rice shape, TO:0000149 - seed width","PO:0009010 - seed ",null,null,"Os10g0573000","Os03g0858800","Os02g0811000",2.3510377,0,null,"SPL6","spl6","SPOTTED LEAF 6","spotted leaf6, spotted leaf 6, spotted leaf-6",1," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os01g0160800","Os05g0227600","Os10g0539600",4.3911285,3.3820488,null,"IPT8","OsIPT8","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 8","adenosine phosphate isopentenyltransferase 8, isopentenyltransferase 8",1," Biochemical character,  Character as QTL - Yield and productivity","GO:0008033 - tRNA processing, GO:0005524 - ATP binding, GO:0016740 - transferase activity, GO:0009824 - adenylate dimethylallyltransferase activity, GO:0009691 - cytokinin biosynthetic process, GO:0009733 - response to auxin stimulus, GO:0009536 - plastid","TO:0000163 - auxin sensitivity, TO:0000456 - spikelet number, TO:0000011 - nitrogen sensitivity","PO:0009006 - shoot system ","Os01g0688300","LOC_Os01g49390.1",null,"Os01g0160800","Os09g0443500",-1.0882392,0]
[{"$nulls":6},"Os04g0606000","LOC_Os04g51660",-1.0785271,"Os01g0685400","LOC_Os01g49160","MYB",-1.3034965,{"$nulls":10},"Os01g0930800","Os07g0619200","Os03g0638200","Os03g0638200",1.4743603,1.0119572,null,"Os11g0138900",6.0074983,"Os02g0787600",-2.1467886,{"$nulls":17},"Os05g0227600",2.6376226,3.817176,{"$nulls":9},"NOA1","OsNOA1","NITRIC OXIDE-ASSOCIATED 1","Nitric Oxide-Associated1, Nitric Oxide Associated protein 1, NO-ASSOCIATED 1 protein",2," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004517 - nitric-oxide synthase activity, GO:0009409 - response to cold, GO:0046685 - response to arsenic, GO:0005525 - GTP binding, GO:0005739 - mitochondrion, GO:0051607 - defense response to virus","TO:0000326 - leaf color, TO:0000031 - silicon sensitivity, TO:0000319 - rubisco content, TO:0000303 - cold tolerance, TO:0000495 - chlorophyll content, TO:0000020 - black streak dwarf virus resistance",null,"Os02g0104700","LOC_Os02g01440.1","LOC_Os07g06970.1","Os09g0346500","Os11g0148500","Os02g0635000",0,1.2736211,null,"TIFY11E","OsJAZ 13, OsJAZ13, JAZ13, OsTIFY11e, OsJAZ13a, OsJAZ13b, OsJAZ13c, OsJAZ13d","TIFY GENE 11E","Jasmonate ZIM-domain protein 13",10," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0040008 - regulation of growth, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0042594 - response to starvation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0034052 - positive regulation of plant-type hypersensitive response, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009723 - response to ethylene stimulus, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009873 - ethylene mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002736 - flower number, TO:0000576 - stem length, TO:0000172 - jasmonic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000173 - ethylene sensitivity",null,"Os10g0391400","LOC_Os10g25230.1",null,"Os04g0566600","Os03g0109400",1.4288174,0,null,"D1","d1, GPA1, GA1, OsGA1, RGA1, dwf1, XA7, RGA, D1/RGA1, D89","DAIKOKU DWARF","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009725 - response to hormone stimulus, GO:0005525 - GTP binding, GO:0004871 - signal transducer activity, GO:0003924 - GTPase activity, GO:0009408 - response to heat, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0006952 - defense response, GO:0006471 - protein amino acid ADP-ribosylation, GO:0005834 - heterotrimeric G-protein complex, GO:0010038 - response to metal ion, GO:0009755 - hormone-mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007275 - multicellular organismal development, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling","TO:0000166 - gibberellic acid sensitivity, TO:0000080 - micronutrient sensitivity, TO:0000207 - plant height, TO:0000132 - basal internode diameter, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000299 - leaf lamina color, TO:0000303 - cold tolerance, TO:0000089 - panicle type, TO:0000734 - grain length, TO:0000326 - leaf color, TO:0002730 - grain shape, TO:0000615 - abscisic acid sensitivity, TO:0000576 - stem length, TO:0000158 - red light sensitivity, TO:0000040 - panicle length, TO:0000391 - seed size, TO:0000135 - leaf length, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000484 - seed shape, TO:0000259 - heat tolerance, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000455 - seed set percent, TO:0000397 - grain size","PO:0009049 - inflorescence , PO:0020039 - leaf lamina , PO:0020142 - stem internode , PO:0000003 - whole plant , PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os05g0333200","LOC_Os05g26890.1","Os05g0519400","Os06g0219700","Os03g0410700",2.3445807,0,null,"EG1","eg1, GY1, OsEG1, OsGY1","EXTRA GLUME 1","extra glume-1, extra glume 1, extra glume1, gaoyao1",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0016042 - lipid catabolic process, GO:0009507 - chloroplast, GO:0009408 - response to heat, GO:0030154 - cell differentiation, GO:0009873 - ethylene mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0009695 - jasmonic acid biosynthetic process, GO:0008970 - phospholipase A1 activity","TO:0000173 - ethylene sensitivity, TO:0006022 - floral organ development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0002668 - jasmonic acid content, TO:0001007 - coleoptile length, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000544 - mesocotyl length","PO:0009010 - seed , PO:0009082 - spikelet floret , PO:0009039 - glume ","Os01g0900400","LOC_Os01g67430.1","Os11g0199200","Os02g0828600","Os10g0109300",0,3.37045,null,"DSG1","OsMAPK6, MAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, OsDSG1","DWARF AND SMALL GRAIN 1","Mitogen-activated protein kinase 1, MAP kinase 1, MAP kinase 6, dwarf and small grain1",6," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010200 - response to chitin, GO:0005524 - ATP binding, GO:0009524 - phragmoplast, GO:0009651 - response to salt stress, GO:0010120 - camalexin biosynthetic process, GO:0006952 - defense response, GO:0009790 - embryonic development, GO:0009741 - response to brassinosteroid stimulus, GO:0002238 - response to molecule of fungal origin, GO:0009414 - response to water deprivation, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009409 - response to cold, GO:0009814 - defense response, incompatible interaction, GO:0009734 - auxin mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0009574 - preprophase band, GO:0043068 - positive regulation of programmed cell death, GO:0010268 - brassinosteroid homeostasis, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0004707 - MAP kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0048481 - ovule development, GO:0009742 - brassinosteroid mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0000165 - MAPKKK cascade, GO:0005737 - cytoplasm, GO:0006468 - protein amino acid phosphorylation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:2000038 - regulation of stomatal complex development, GO:0005802 - trans-Golgi network, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus, GO:0080136 - priming of cellular response to stress, GO:0009738 - abscisic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0009733 - response to auxin stimulus, GO:0006979 - response to oxidative stress, GO:2000037 - regulation of stomatal complex patterning, GO:0042127 - regulation of cell proliferation, GO:0051301 - cell division","TO:0000447 - filled grain number, TO:0002668 - jasmonic acid content, TO:0002677 - brassinosteroid sensitivity, TO:0002676 - brassinosteroid content, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000454 - stem borer resistance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000203 - bacterial leaf streak disease resistance, TO:0006032 - panicle size, TO:0002669 - diterpenoid phytoalexin content, TO:0000273 - armyworm resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000175 - bacterial blight disease resistance, TO:0000439 - fungal disease resistance, TO:0002660 - cytokinin content, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0000074 - blast disease, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os06g0154500","LOC_Os06g06090.2, LOC_Os06g06090.1",null,"Os11g0199200","Os10g0498700",-1.1622273,0]
[{"$nulls":6},"Os01g0621900","LOC_Os01g43370",-1.0719166,"Os04g0470600","LOC_Os04g39470","MYB",1.0198911,{"$nulls":10},"Os04g0474800","Os05g0527000","Os11g0525600","Os11g0525600",1.4500412,2.0368564,null,"Os10g0478000",5.991072,"Os11g0672200",-2.140228,{"$nulls":17},"Os01g0229400",0,2.7913215,{"$nulls":9},"TIFY11D","OsTIFY11d, OsJAZ1, JAZ1, OsJAZ 12, OsJAZ12, JAZ12","TIFY GENE 11D","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0042594 - response to starvation, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000011 - nitrogen sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000276 - drought tolerance",null,"Os10g0392400","LOC_Os10g25290.1","LOC_Os01g09100.1","Os01g0227100","Os07g0563300","Os03g0112900",0,1.2192672,null,"_","OsPAL05, PAL05, OsPAL3, PAL5, PAL3, OsPAL2;3, PAL2;3, OsPAL2-1, PAL2-1","_","Phenylalanine ammonia-lyase 05",2," Biochemical character,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0005829 - cytosol, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0006559 - L-phenylalanine catabolic process, GO:0046394 - carboxylic acid biosynthetic process, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0010229 - inflorescence development, GO:0009697 - salicylic acid biosynthetic process, GO:0009800 - cinnamic acid biosynthetic process, GO:0006979 - response to oxidative stress","TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000605 - hydrogen peroxide content","PO:0001083 - inflorescence development stage ","Os02g0626600","LOC_Os02g41670.1",null,"Os05g0395300","Os07g0603700",1.4216543,0,null,"FLO1","flo1, flo1-1, o","FLOURY ENDOSPERM 1","floury endosperm1, floury endosperm 1, opaque, floury endosperm-1",5," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process","TO:0000104 - floury endosperm, TO:0000266 - chalky endosperm","PO:0009089 - endosperm ",null,null,"Os03g0175800","Os06g0142900","Os01g0848400",2.314164,0,null,"LRT2","CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2, Ppcti","LATERAL ROOTLESS2","cyclophilin2, cyclophilin 2, cyclophilin-2, cyclophilin 19-2, LATERAL ROOTLESS 2, lateral-rootless 2, REDUCED GROWTH OF LATERAL ROOTS, reduced growth of lateral roots, lateral root-2, Peptidyl-prolyl cis-trans isomerase",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0006457 - protein folding, GO:0009734 - auxin mediated signaling pathway, GO:0007275 - multicellular organismal development, GO:0009629 - response to gravity, GO:0004600 - cyclophilin, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0016018 - cyclosporin A binding, GO:0005886 - plasma membrane, GO:0009507 - chloroplast, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0015994 - chlorophyll metabolic process, GO:0042743 - hydrogen peroxide metabolic process, GO:0048527 - lateral root development, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0009733 - response to auxin stimulus, GO:0048046 - apoplast, GO:0050801 - ion homeostasis","TO:0001013 - lateral root number, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0002693 - gravity response trait, TO:0000495 - chlorophyll content, TO:0000656 - root development trait, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance","PO:0009005 - root , PO:0007520 - root development stage ","Os02g0121300","LOC_Os02g02890.1","Os10g0431000","Os08g0189300","Os02g0110200",0,3.3673182,null,"NAC2","OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2, DLN113, OsDLN113","NAC DOMAIN-CONTAINING PROTEIN 2","NAC domain-containing protein 004, NAC domain-containing protein 4, NAC domain-containing protein 34, NAC domain-containing protein 58, miR164-targeted NAC2, Oryza miR164-targeted NAC2, Oryza sativa tillering1, ORESARA 1.2, DLN repressor 113, DLN motif protein 113",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination,  Other","GO:0006970 - response to osmotic stress, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009740 - gibberellic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0006350 - transcription, GO:0010150 - leaf senescence, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010187 - negative regulation of seed germination, GO:0010029 - regulation of seed germination, GO:0010942 - positive regulation of cell death, GO:0080036 - regulation of cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance, TO:0000017 - anatomy and morphology related trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0002768 - spikelet length, TO:0000656 - root development trait, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000227 - root length, TO:0000567 - tiller angle, TO:0002685 - crown root number, TO:0002660 - cytokinin content, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000145 - internode length, TO:0000095 - osmotic response sensitivity, TO:0000396 - grain yield, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000450 - grain yield per panicle","PO:0007045 - coleoptile emergence stage , PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage , PO:0000025 - root tip , PO:0000043 - crown root , PO:0005029 - root primordium , PO:0020121 - lateral root ","Os04g0460600","LOC_Os04g38720.1",null,"Os10g0431000","Os08g0407200",-1.1862564,0]
[{"$nulls":6},"Os06g0275000","LOC_Os06g16370",-1.0695515,"Os04g0508500","LOC_Os04g42950","MYB",-1.5152645,{"$nulls":10},"Os04g0477500","Os06g0275000","Os09g0560000","Os09g0560000",1.3698703,2.5940719,null,"Os07g0674800",5.973049,"Os07g0641700",-2.130233,{"$nulls":17},"Os12g0291400",0,7.0811596,{"$nulls":9},"TIFY11C","OsJAZ2, JAZ2, OsJAZ 11, OsJAZ11, Os-JAZ11, JAZ11, OsTIFY11c. OsJAZ1, JAZ1","TIFY GENE 11C","Jasmonate ZIM-domain protein 2, Jasmonate ZIM-domain protein 11",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0016036 - cellular response to phosphate starvation, GO:0055062 - phosphate ion homeostasis, GO:0010966 - regulation of phosphate transport, GO:0031347 - regulation of defense response, GO:0042594 - response to starvation, GO:0080022 - primary root development, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000148 - viral disease resistance, TO:0000207 - plant height, TO:0000180 - spikelet fertility",null,"Os03g0180900","LOC_Os03g08320.1","LOC_Os01g53040.1","Os11g0167800","Os12g0477200","Os01g0227100",0,1.207028,null,"_","OsPAL07, OsPAL, PAL07, OsPAL6, PAL6, PAL1, OsPAL7, PAL7","_","Phenylalanine ammonia-lyase 07",4," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0006559 - L-phenylalanine catabolic process, GO:0046688 - response to copper ion, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0009800 - cinnamic acid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009620 - response to fungus, GO:0009809 - lignin biosynthetic process, GO:0002213 - defense response to insect, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0009697 - salicylic acid biosynthetic process, GO:0010229 - inflorescence development, GO:0045548 - phenylalanine ammonia-lyase activity","TO:0000621 - inflorescence development trait, TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000021 - copper sensitivity, TO:0000424 - brown planthopper resistance, TO:0000207 - plant height, TO:0000326 - leaf color","PO:0020104 - leaf sheath , PO:0009047 - stem , PO:0001083 - inflorescence development stage ","Os04g0518400","LOC_Os04g43800.1",null,"Os06g0690200","Os04g0563900",1.4122585,0,null,"DU2035","du2035*, du9, du2035","DULL ENDOSPERM 2035","dull endosperm(2035), dull endoaperm (2035), dull endosperm-9",6," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000105 - dull endosperm, TO:0000196 - amylose content","PO:0009089 - endosperm ",null,null,"Os01g0878700","Os02g0626100","Os09g0570800",2.240189,0,null,"PIB","Pi b(Pi s), Pis, Pib, Pi-s, Pi-hy","PYRICULARIA ORYZAE RESISTANCE B","Pyricularia oryzae resistance-b, Magnaporthe grisea resistance-b, Blast resistance b",2," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043531 - ADP binding, GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000508 - penetrated root length","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os01g0103100","Os05g0455500","Os01g0639900",0,3.3393667,null,"NAR2.1","OsNAR2.1, OsNRT3.1A","ACTIVATOR FOR NRT2","activator for NRT2, high-affinity nitrate transporter-activating element 2.1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0042128 - nitrate assimilation, GO:0009610 - response to symbiotic fungus, GO:0015112 - nitrate transmembrane transporter activity, GO:0009611 - response to wounding, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0019740 - nitrogen utilization","TO:0000455 - seed set percent, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000276 - drought tolerance, TO:0000078 - root dry weight, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0001013 - lateral root number, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0000136 - relative water content",null,"Os02g0595900","LOC_Os02g38230.1",null,"Os01g0103100","Os02g0741500",-1.2366484,0]
[{"$nulls":6},"Os03g0818800","LOC_Os03g60430",-1.0689335,"Os07g0634900","LOC_Os07g44090","MYB",3.0182467,{"$nulls":10},"Os11g0184300","Os03g0266200","Os12g0271700","Os12g0271700",1.3573774,2.7686508,null,"Os03g0304800",5.959131,"Os11g0116550",-2.1221395,{"$nulls":17},"Os01g0869800",0,4.383471,{"$nulls":9},"TIFY11B","OsJAZ4, JAZ4, OsJAZ 10, OsJAZ10, JAZ10, OsTIFY11b","TIFY GENE 11B","Jasmonate ZIM-domain protein 4, Jasmonate ZIM-domain protein 10",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009409 - response to cold, GO:0005634 - nucleus","TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000180 - spikelet fertility, TO:0000303 - cold tolerance, TO:0002757 - flag leaf length, TO:0000172 - jasmonic acid sensitivity",null,"Os03g0181100","LOC_Os03g08330.1","LOC_Os10g42850.1","Os04g0234600","Os02g0755000","Os04g0611800",1.4300122,1.1875777,null,"_","GER7, OsGLP3-7, GLP3-7","_","germin-like protein 7, german-like protein 3-7",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0048046 - apoplast","TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os03g0804500","LOC_Os03g58980.1",null,"Os02g0714300","Os11g0289700",1.3922324,0,null,"DUEM47","duEM47*, du11, duEM47","DULL ENDOAPERM EM 47","dull endoaperm(EM47), dull endoaperm (EM47), dull endosperm-11",6," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009089 - endosperm ",null,null,"Os03g0170400","Os04g0169100","Os09g0459200",2.2374077,0,null,"PI14","Pi14(t), Pi14(t)*, Pi14","PYRICULARIA ORYZAE RESISTANCE 14","Pyricularia oryzae resistance 14, Magnaporthe grisea resistance-14, Blast resistance 14",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000488 - seed composition based quality trait, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os02g0823100","Os04g0580400","Os03g0129300",2.203059,3.3167012,null,"NRT2.1","OsNRT2.1, OsNRT2.2","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.1",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0009926 - auxin polar transport, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0015112 - nitrate transmembrane transporter activity, GO:0009415 - response to water, GO:0010618 - aerenchyma formation, GO:0010167 - response to nitrate, GO:0009693 - ethylene biosynthetic process","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000586 - seminal root length, TO:0000237 - water stress trait, TO:0000457 - total biomass yield, TO:0000346 - tiller number, TO:0000276 - drought tolerance",null,"Os02g0112100 ","LOC_Os02g02170.1",null,"Os02g0823100","Os03g0151800",-1.298541,0]
[{"$nulls":6},"Os03g0124000","LOC_Os03g03260",-1.0684227,"Os09g0532900","LOC_Os09g36250","MYB",2.1058097,{"$nulls":10},"Os01g0130400","Os06g0133000","Os04g0445700","Os04g0445700",1.3174461,2.0806143,null,"Os04g0615600",5.9540343,"Os09g0454600",-2.1220448,{"$nulls":17},"Os05g0135500",7.861364,9.636413,{"$nulls":9},"TIFY10A","OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A","TIFY GENE 10A","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0031347 - regulation of defense response, GO:0005634 - nucleus, GO:0051607 - defense response to virus, GO:0009611 - response to wounding","TO:0002736 - flower number, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0002759 - grain number",null,"Os03g0402800","LOC_Os03g28940.2, LOC_Os03g28940.1","LOC_Os01g61080.1","Os06g0237502","Os01g0856500","Os07g0247100",0,1.180143,null,"MGD2","OsMGD, MGD, OsMGD2","MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2","Monogalactosyldiacylglycerol synthase, MGDG synthase, MGDG synthase 2",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0045017 - glycerolipid biosynthetic process, GO:0046509 - 1,2-diacylglycerol 3-beta-galactosyltransferase activity, GO:0009658 - chloroplast organization, GO:0030246 - carbohydrate binding, GO:0030259 - lipid glycosylation, GO:0042594 - response to starvation, GO:0010044 - response to aluminum ion, GO:0016036 - cellular response to phosphate starvation, GO:0019374 - galactolipid metabolic process, GO:0009507 - chloroplast, GO:0006794 - phosphorus utilization, GO:0030912 - response to deep water, GO:0009908 - flower development, GO:0009739 - response to gibberellin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress, GO:0009535 - chloroplast thylakoid membrane, GO:0048316 - seed development, GO:0006631 - fatty acid metabolic process, GO:0009247 - glycolipid biosynthetic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009416 - response to light stimulus","TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000293 - chlorophyll-a content, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000371 - yield trait, TO:0000286 - submergence sensitivity, TO:0000627 - relative phosphorus utilization efficiency, TO:0000604 - fat and essential oil content, TO:0000102 - phosphorus sensitivity, TO:0000162 - seed quality, TO:0005001 - linoleic acid content, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length","PO:0001170 - seed development stage , PO:0009066 - anther , PO:0009089 - endosperm , PO:0009010 - seed , PO:0025034 - leaf , PO:0007615 - flower development stage ","Os02g0802700","LOC_Os02g55910.2, LOC_Os02g55910.1",null,"Os09g0513900","Os02g0494400",1.3357145,0,null,"GLUP6","glup6(t), Glup6(t), Glup6, OsVPS9A, VPS9a, GPA2/VPS9a, GPA2, GLUP6/GEF","GLUTELIN PRECURSOR 6","glutelin precursor6, glutelin precursor 6, Glutelin precursor-6, GLUTELIN PRECURSOR ACCUMULATION2, glutelin precursor accumulation 2, Vacuolar sorting protein9 domain-containing protein, Rab5-GEF, glutelin precursor mutant6, Rab5a-guanine exchange factor",3," Seed - Physiological traits - Storage substances","GO:0005829 - cytosol, GO:0009790 - embryonic development, GO:0016020 - membrane, GO:0048528 - post-embryonic root development, GO:0042546 - cell wall biogenesis, GO:0015031 - protein transport, GO:0016482 - cytoplasmic transport, GO:0000919 - cell plate formation, GO:0045735 - nutrient reservoir activity, GO:0005089 - Rho guanyl-nucleotide exchange factor activity, GO:0005634 - nucleus","TO:0000490 - protein composition related trait","PO:0009010 - seed ","Os03g0262900","LOC_Os03g15650.1, LOC_Os03g15650.2, LOC_Os03g15650.3","Os04g0490500","Os04g0665400","Os02g0301100",2.0793974,0,null,"PI16","Pi16(t), Pi16, Pi-16(t)","PYRICULARIA ORYZAE RESISTANCE 16","Pyricularia oryzae resistance 16, Magnaporthe grisea resistance-16, Blast resistance 16",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000491 - fat and essential oil composition related trait, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os11g0184900","Os01g0919900","Os08g0473900",3.8398027,3.305474,null,"NRT2.3","OsNRT2.3, OsNRT2;1, OsNRT2.3a, OsNRT2.3b, OsNRT2;3a, OsNRT2.5","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.3",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0015112 - nitrate transmembrane transporter activity, GO:0009620 - response to fungus, GO:0055085 - transmembrane transport, GO:0009268 - response to pH, GO:0016021 - integral to membrane, GO:0019740 - nitrogen utilization, GO:0007165 - signal transduction, GO:0009610 - response to symbiotic fungus, GO:0006885 - regulation of pH, GO:0070482 - response to oxygen levels, GO:0005886 - plasma membrane, GO:0009413 - response to flooding","TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000511 - phosphorus uptake, TO:0000396 - grain yield, TO:0000113 - giant embryo, TO:0000015 - oxygen sensitivity, TO:0000445 - seed number, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0006032 - panicle size","PO:0025034 - leaf , PO:0009005 - root , PO:0005417 - phloem ","Os01g0704100 ","LOC_Os01g50820.1",null,"Os11g0184900","Os08g0537800",-1.2991232,0]
[{"$nulls":6},"Os01g0871200","LOC_Os01g65080",-1.065425,"Os12g0572000","LOC_Os12g38400","MYB",3.1233323,{"$nulls":10},"Os11g0525600","Os03g0213200","Os02g0792000","Os02g0792000",1.3013312,3.080574,null,"Os03g0146800",5.932693,"Os09g0349650",-2.1186686,{"$nulls":17},"Os02g0817900",1.1431576,2.516514,{"$nulls":9},"TIFY10B","OsJAZ6, OsJAZ 7, OsJAZ7, OsTIFY10B, JAZ6, JAZ7","TIFY GENE 10B","Jasmonate ZIM-domain protein 6, Jasmonate ZIM-domain protein 7.",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus","TO:0000576 - stem length, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0002759 - grain number, TO:0002736 - flower number, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0615200","LOC_Os07g42370.3, LOC_Os07g42370.2, LOC_Os07g42370.1","LOC_Os01g51690.1","Os04g0613700","Os05g0207500","Os12g0563200",0,1.1762419,null,"YL3","ONAC109, NAC109, OsYL3","YELLOW LEAF 3","NAC domain-containing protein 109, yellow leaf 3",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046345 - abscisic acid catabolic process, GO:0009658 - chloroplast organization, GO:0051510 - regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010150 - leaf senescence, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0010364 - regulation of ethylene biosynthetic process","TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000357 - growth and development trait, TO:0000325 - soluble protein content, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000227 - root length, TO:0000145 - internode length, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000592 - 1000-dehulled grain weight, TO:0002667 - abscisic acid content, TO:0002675 - gibberellic acid content, TO:0002672 - auxin content","PO:0001054 - 4 leaf senescence stage ","Os09g0552800","LOC_Os09g38000.1",null,"Os01g0976800","Os06g0163000",1.324289,0,null,"SBE1","sbe1, Rbe1. Sbe1, sbe1*(QEI), RBE1, BEI, SBE I, QEI, OsBEI, BE1, OsSBEI, SBEI","STARCH BRANCHING ENZYME 1","starch branching enzyme1 (Q enzyme1), starch branching enzyme1, Q enzyme1, starch branching enzyme 1, Q-enzyme 1, \\1, 4-alpha-glucan branching enzyme, chloroplast precursor\\\", \\\"1, 4-alpha-glucan branching enzyme, chloroplast\\\", \\\"1, 4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic\\\", Q-enzyme 1, starch branching enzyme 1, starch branching enzyme-1, branching enzyme-I, Q-Enzyme I, starch Branching enzyme isoform Type A, Branching enzyme isoform Type A, BE isoform type A, branching enzyme 1\"",6," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005976 - polysaccharide metabolic process, GO:0003844 - 1,4-alpha-glucan branching enzyme activity, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0019252 - starch biosynthetic process, GO:0043169 - cation binding, GO:0009536 - plastid, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0009568 - amyloplast starch grain, GO:0005982 - starch metabolic process, GO:0009413 - response to flooding","TO:0000097 - amylopectin content, TO:0000489 - carbohydrate composition related trait, TO:0000196 - amylose content, TO:0000333 - sugar content, TO:0000286 - submergence sensitivity, TO:0000590 - grain weight","PO:0025034 - leaf , PO:0009089 - endosperm ","Os06g0726400","LOC_Os06g51084.3, LOC_Os06g51084.1, LOC_Os06g51084.2, LOC_Os06g51084.8, LOC_Os06g51084.7, LOC_Os06g51084.6, LOC_Os06g51084.5, LOC_Os06g51084.4","Os02g0169300","Os01g0718300","Os08g0159500",2.0106668,0,null,"SPL2","spl2(bl3), spl2, bl3","SPOTTED LEAF 2","spotted leaf2, spotted leaf 2, spotted leaf-2",2," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf , PO:0009047 - stem ",null,null,"Os04g0398000","Os04g0390100","Os11g0116000",0,3.2706025,null,"SUT1","OsSUT1, OsSUT2","SUCROSE TRANSPORTER 1","Sucrose transporter-1, Sucrose transporter 1",3," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005364 - maltose:hydrogen symporter activity, GO:0051899 - membrane depolarization, GO:0002215 - defense response to nematode, GO:0008506 - sucrose:hydrogen symporter activity, GO:0009413 - response to flooding, GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0015770 - sucrose transport, GO:0008515 - sucrose transmembrane transporter activity, GO:0009846 - pollen germination, GO:0015293 - symporter activity, GO:0042950 - salicin transmembrane transporter activity, GO:0005985 - sucrose metabolic process, GO:0005887 - integral to plasma membrane, GO:0008519 - ammonium transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000401 - plant growth hormone sensitivity, TO:0000286 - submergence sensitivity, TO:0000384 - nematode damage resistance, TO:0000333 - sugar content, TO:0000207 - plant height","PO:0000003 - whole plant ","Os03g0170900","LOC_Os03g07480.4, LOC_Os03g07480.3, LOC_Os03g07480.2, LOC_Os03g07480.1",null,"Os04g0398000","Os06g0706400",-1.3119088,0]
[{"$nulls":6},"Os01g0542700","LOC_Os01g36220",-1.0565652,"Os01g0193900","LOC_Os01g09760","MYB_related",-1.6069416,{"$nulls":10},"Os06g0573600","Os05g0530400","Os03g0277000","Os03g0277000",1.1665411,2.2104716,null,"Os07g0681200",5.923565,"Os10g0202501",-2.1126852,{"$nulls":17},"Os01g0294700",0,7.996718,{"$nulls":9},"TIFY10C","OsJAZ7, JAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8","TIFY GENE 10C","Jasmonate ZIM-domain protein 7, Jasmonate ZIM-domain protein 8.",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0005829 - cytosol, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002736 - flower number, TO:0002759 - grain number, TO:0000172 - jasmonic acid sensitivity, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ","Os09g0439200","LOC_Os09g26780.1","LOC_Os07g02060.1","Os12g0563200","Os01g0678500","Os01g0670800",1.4240936,1.0322542,null,"WAK98","OsWAK98, OsRLCK287, RLCK287","WALL-ASSOCIATED KINASE GENE 98","Receptor-like Cytoplasmic Kinase 287",10," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0112700","LOC_Os10g02360.1",null,"Os08g0149000","Os07g0563300",1.3104769,0,null,"UNA","Una, Un1","UNEVEN GRAIN A","Uneven grain, Uneven grain-a, Uneven grain-1, UNEVEN GRAIN",6," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000287 - brown rice shape","PO:0009010 - seed , PO:0009038 - palea ",null,null,"Os03g0232600","Os03g0650000","Os02g0648100",1.9717122,0,null,"GH2","gh2, CAD2, CAD, OsCAD2, GH2","GOLD HULL AND INTERNODE 2","gold hull and internode2, gold hull and internode-2, Cinnamyl alcohol dehydrogenase 2, Sinapyl alcohol dehydrogenase, Protein GOLD HULL AND INTERNODE 2, Cinnamyl alcohol dehydrogenase",2," Biochemical character,  Vegetative organ - Culm,  Coloration - Others,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009834 - secondary cell wall biogenesis, GO:0055114 - oxidation reduction, GO:0008270 - zinc ion binding, GO:0009642 - response to light intensity, GO:0045551 - cinnamyl-alcohol dehydrogenase activity, GO:0022900 - electron transport chain, GO:0042742 - defense response to bacterium, GO:0009411 - response to UV, GO:0009808 - lignin metabolic process, GO:0020037 - heme binding, GO:0009055 - electron carrier activity, GO:0009809 - lignin biosynthetic process","TO:0000460 - light intensity sensitivity, TO:0000426 - internode color, TO:0000190_TO:0000426 - \\seed coat color\\\" or \\\"internode color\\\", TO:0000733 - lignin biosynthesis trait, TO:0000732 - lignin monomer content, TO:0000264 - lemma and palea color, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000011 - nitrogen sensitivity, TO:0000051 - stem strength\"","PO:0000036 - leaf vascular system , PO:0000039 - shoot axis vascular system , PO:0003011 - root vascular system , PO:0009005 - root , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0009047 - stem ","Os02g0187800","LOC_Os02g09490.1","Os03g0215400","Os02g0280700","Os01g0177900",0,3.2658243,null,"PHYB","phyB, PHYB1, OsPHYB, OsphyB, OsYHB, YHB, OsPHYB/OsYHB","PHYTOCHROME B","PhytochromeB, Phytochrome B",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0042744 - hydrogen peroxide catabolic process, GO:0009585 - red, far-red light phototransduction, GO:0007600 - sensory perception, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0007623 - circadian rhythm, GO:0018106 - peptidyl-histidine phosphorylation, GO:0016020 - membrane, GO:0008020 - G-protein coupled photoreceptor activity, GO:0009658 - chloroplast organization, GO:0030912 - response to deep water, GO:0009881 - photoreceptor activity, GO:0010114 - response to red light, GO:0009640 - photomorphogenesis, GO:0017006 - protein-tetrapyrrole linkage, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0000155 - two-component sensor activity, GO:0018298 - protein-chromophore linkage, GO:0048573 - photoperiodism, flowering, GO:0042803 - protein homodimerization activity","TO:0000524 - submergence tolerance, TO:0002685 - crown root number, TO:0000586 - seminal root length, TO:0000135 - leaf length, TO:0000158 - red light sensitivity, TO:0000326 - leaf color, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0002616 - flowering time, TO:0000298 - chlorophyll ratio, TO:0000566 - stomatal frequency, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000346 - tiller number, TO:0002710 - root shape",null,"Os03g0309200","LOC_Os03g19590.1",null,"Os03g0215400","Os02g0819100",-1.3327707,0]
[{"$nulls":6},"Os05g0567900","LOC_Os05g49280",-1.055427,"Os01g0210200","LOC_Os01g11200","MYB_related",-1.366676,{"$nulls":10},"Os01g0875500","Os02g0465400","Os01g0701700","Os01g0701700",-1.2080822,-2.0907042,null,"Os02g0248200",5.920797,"Os02g0702100",-2.1104476,{"$nulls":17},"Os12g0292400",0,6.6509457,{"$nulls":9},"TIFY9","OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ11/TIFY9","TIFY GENE 9","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000172 - jasmonic acid sensitivity, TO:0000207 - plant height, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000148 - viral disease resistance",null,"Os04g0395800","LOC_Os04g32480.1","LOC_Os02g26430.1","Os03g0132200","Os06g0713800","Os06g0498400",1.4988832,1.0321459,null,"GLP1","OsGLP1, GER1, GER5, GLP110, OsGER1, OsGER5, OsGLP8-14, GLP8-14","GERMIN-LIKE PROTEIN 1","Germin-like protein 8-14, Germin-like protein 5, Germin-like protein 1, Germin protein type 1, germin-like protein1",8," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0010229 - inflorescence development","TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020104 - leaf sheath ","Os08g0460000","LOC_Os08g35760.1",null,"Os10g0117000","Os11g0533500",1.2534944,0,null,"C","C, Cp, OsC1, Os-C1, C1, OsMyb6, Myb6, OsPL6, PL6, OsGL1E, GL1E","CHROMOGEN FOR ANTHOCYANIN","Chromogen for anthocyanin, Chromogen, Rice C1 anthocyanin regulatory gene, myb transcription factor 6, transcription factor MYB6, Oryza saliva C1, rice homolog of maize C1, Purple Leaf 6. GLABRA1E, GLABRA 1E",6," Vegetative organ - Leaf,  Reproductive organ - Inflorescence,  Coloration - Anthocyanin,  Coloration - Chlorophyll,  Seed - Morphological traits,  Other","GO:0015994 - chlorophyll metabolic process, GO:0005634 - nucleus, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009812 - flavonoid metabolic process, GO:0003677 - DNA binding, GO:0009718 - anthocyanin biosynthetic process, GO:0006979 - response to oxidative stress","TO:0000316 - photosynthetic ability, TO:0000426 - internode color, TO:0000190 - seed coat color, TO:0000340 - total soluble sugar content, TO:0000140 - apiculus color, TO:0000290 - flavonoid content, TO:0000364 - leaf collar color, TO:0000605 - hydrogen peroxide content, TO:0000264 - lemma and palea color, TO:0002675 - gibberellic acid content, TO:0000326 - leaf color, TO:0000071 - anthocyanin content, TO:0001018 - transpiration rate, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate, TO:0000400 - sterile lemma color, TO:0002715 - chloroplast development trait, TO:0000258 - leaf thickness, TO:0002660 - cytokinin content, TO:0000295 - chlorophyll-b content, TO:0002667 - abscisic acid content, TO:0002657 - oxidative stress, TO:0000141 - awn color, TO:0000185 - stigma color, TO:0000495 - chlorophyll content, TO:0000367 - basal leaf sheath color, TO:0000293 - chlorophyll-a content","PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009073 - stigma , PO:0025349 - awn , PO:0009037 - lemma , PO:0006033 - paleal apiculus , PO:0005005 - shoot internode , PO:0009025 - vascular leaf , PO:0009010 - seed , PO:0006012 - leaf collar , PO:0006032 - lemma awn , PO:0009038 - palea , PO:0020104 - leaf sheath , PO:0007632 - seed maturation stage ","Os06g0205100","LOC_Os06g10350.1","Os10g0567400","Os02g0763000","Os06g0203800",1.9706968,0,null,"BL1","bl1","BROWN LEAF SPOT 1","brown leaf spot1, brown leaf spot 1, brown leaf spot-1",2," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000326 - leaf color, TO:0000221 - glume color, TO:0000063 - mimic response, TO:0000056 - stem color, TO:0000069 - variegated leaf","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009088 - seed coat ",null,null,"Os08g0498400","Os08g0498400","Os02g0833900",5.081926,3.2200165,null,"PSR1","PSR1, NiR, OsNiR, OsNIR1, NIR1, FD-NiR, OsNiR2","PROMOTOR OF SHOOT REGENERATION 1","Promotor of shoot regeneration-1, ferredoxin-nitrite reductase, \\Ferredoxin--nitrite reductase, chloroplastic\\\"\"",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0042128 - nitrate assimilation, GO:0020037 - heme binding, GO:0006810 - transport, GO:0022900 - electron transport chain, GO:0019740 - nitrogen utilization, GO:0046872 - metal ion binding, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0048307 - ferredoxin-nitrite reductase activity","TO:0000371 - yield trait, TO:0000557 - secondary branch number, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000346 - tiller number",null,"Os01g0357100","LOC_Os01g25484.3, LOC_Os01g25484.2, LOC_Os01g25484.1",null,null,"Os01g0350900",-1.3581586,0]
[{"$nulls":6},"Os04g0509600","LOC_Os04g43070",-1.0550585,"Os01g0524500","LOC_Os01g34060","MYB_related",2.2737515,{"$nulls":10},"Os09g0539200","Os01g0733200","Os01g0859400","Os01g0859400",-1.3868147,1.130426,null,"Os04g0126500",5.9023075,"Os02g0193100",-2.1067634,{"$nulls":17},"Os02g0280700",2.494077,3.7561703,{"$nulls":9},"ERF101","OsERF#101, OsERF101, OsDERF6, DERF6, AP2/EREBP#089, AP2/EREBP89, OsRap2.6, Rap2.6, ERF113, OsERF113","ETHYLENE RESPONSE FACTOR 101","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 101, drought-responsive ethylene response factor 6, drought-responsive ERF 6, ethylene response factor 101, APETALA2/ethylene-responsive element binding protein 89",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009646 - response to absence of light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0048653 - anther development, GO:0009651 - response to salt stress","TO:0000615 - abscisic acid sensitivity, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000396 - grain yield, TO:0000625 - spikelet density, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000227 - root length, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000276 - drought tolerance, TO:0006002 - proline content, TO:0000449 - grain yield per plant, TO:0000172 - jasmonic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0001083 - inflorescence development stage , PO:0009046 - flower , PO:0025313 - tapetum , PO:0020048 - microspore , PO:0001004 - anther development stage ","Os04g0398000","LOC_Os04g32620.1",null,"Os01g0862600","Os10g0562700","Os03g0118400",0,1.0222226,null,"AGO17","OsAGO17","ARGONAUTE 17","Protein argonaute 17",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0051512 - positive regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0031047 - gene silencing by RNA, GO:0003676 - nucleic acid binding, GO:0005739 - mitochondrion","TO:0000449 - grain yield per plant, TO:0000391 - seed size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000266 - chalky endosperm, TO:0000455 - seed set percent, TO:0000456 - spikelet number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000590 - grain weight","PO:0020141 - stem node ","Os02g0169400","LOC_Os02g07310.1",null,"Os01g0114100","Os02g0696900",1.2427502,0,null,"ALK","alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6, SS2a","ALKALI DEGENERATION","alkali degeneration, ALKALI DEGENERATION, \\Soluble starch synthase 2-3, chloroplast precursor\\\", \\\"Soluble starch synthase 2-3, chloroplast\\\", \\\"Soluble starch synthase 2-3, chloroplastic/amyloplastic\\\", Soluble starch synthase II-3, Starch synthase IIa, soluble starch synthase IIa, Starch synthase-IIa, Starch synthase IIa\"",6," Seed - Morphological traits - Endosperm,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009501 - amyloplast, GO:0009011 - starch synthase activity, GO:0009536 - plastid, GO:0009413 - response to flooding, GO:0019252 - starch biosynthetic process, GO:0009507 - chloroplast","TO:0000462 - gelatinization temperature, TO:0000488 - seed composition based quality trait, TO:0000134 - alkali digestion, TO:0000097 - amylopectin content, TO:0000286 - submergence sensitivity, TO:0000379 - cool paste viscosity","PO:0009089 - endosperm ","Os06g0229800","LOC_Os06g12450.1","Os02g0137800","Os03g0602300","Os07g0627000",1.9585434,0,null,"ACS1","ACC1*, OsACS1, Os-ACS1, ACC1, OsACC1","ACC SYNTHASE 1","1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 1, ACC synthase 1, 1-aminocyclopropane-1-carboxylate synthase 1, ACC synthase-1, S-adenosyl-L-methionine methylthioadenosine-lyase 1, 1-aminocyclopropane-1-carboxylic acid synthase 1",3," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009058 - biosynthetic process, GO:0008483 - transaminase activity, GO:0009733 - response to auxin stimulus, GO:0016769 - transferase activity, transferring nitrogenous groups, GO:0009835 - ripening, GO:0009693 - ethylene biosynthetic process, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0002213 - defense response to insect, GO:0010446 - response to alkalinity, GO:0009734 - auxin mediated signaling pathway, GO:0042594 - response to starvation, GO:0030170 - pyridoxal phosphate binding, GO:0046689 - response to mercury ion, GO:0046687 - response to chromate, GO:0048364 - root development, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium, GO:0005737 - cytoplasm, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity","TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000163 - auxin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000481 - alkali sensitivity, TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0000034 - chromium sensitivity, TO:0000259 - heat tolerance, TO:0000576 - stem length","PO:0020103 - flag leaf , PO:0009005 - root , PO:0009006 - shoot system ","Os03g0727600","LOC_Os03g51740.1","Os02g0726300","Os02g0726300","Os07g0229700",3.8663642,3.2081091,null,"RBCS","rbcS, OsRbcS, RBCS-C, RbcS2, OsRBCS2, RbcS1, OsRbcS2, OsrbcS1","RUBISCO SMALL SUBUNIT","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"",12," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0016984 - ribulose-bisphosphate carboxylase activity, GO:0019253 - reductive pentose-phosphate cycle, GO:0009507 - chloroplast, GO:0055114 - oxidation reduction, GO:0009853 - photorespiration, GO:0004497 - monooxygenase activity","TO:0000457 - total biomass yield, TO:0001015 - photosynthetic rate, TO:0000011 - nitrogen sensitivity, TO:0000396 - grain yield",null,"Os12g0274700","LOC_Os12g17600.2, LOC_Os12g17600.1",null,null,"Os10g0508100",-1.3601903,0]
[{"$nulls":6},"Os02g0182100","LOC_Os02g08500",-1.0548993,"Os01g0603300","LOC_Os01g41900","MYB_related",1.9925747,{"$nulls":10},"Os03g0329500","Os01g0267900","Os04g0600300","Os04g0600300",-1.4118823,-1.8078017,null,"Os02g0247100",5.8978066,"Os01g0667000",-2.1051662,{"$nulls":17},"Os08g0460000",4.8411865,7.935741,{"$nulls":9},"LFNR1","OsLFNR1, LFNR2, Os-LFNR2, OsLFNR2, FNR, PetH-2","LEAF-TYPE FERREDOXIN-NADP+-OXIDOREDUCTASE 1","leaf-type ferredoxin-NADP+-oxidoreductase 1, leaf-type FNR 1, Fd NADP+ oxidoreductase 1, ferredoxin-NADP reductase",2," Biochemical character,  Vegetative organ - Leaf","GO:0050660 - FAD binding, GO:0050661 - NADP or NADPH binding, GO:0004324 - ferredoxin-NADP+ reductase activity, GO:0009609 - response to symbiotic bacterium, GO:0042651 - thylakoid membrane, GO:0009543 - chloroplast thylakoid lumen, GO:0009767 - photosynthetic electron transport chain",null,null,"Os02g0103800","LOC_Os02g01340.2, LOC_Os02g01340.1","LOC_Os03g05390.13, LOC_Os03g05390.12, LOC_Os03g05390.11, LOC_Os03g05390.10, LOC_Os03g05390.9, LOC_Os03g05390.8, LOC_Os03g05390.7, LOC_Os03g05390.6, LOC_Os03g05390.5, LOC_Os03g05390.4, LOC_Os03g05390.3, LOC_Os03g05390.2, LOC_Os03g05390.1","Os01g0851000","Os01g0574600","Os03g0123300",2.6666102,1.0072118,null,"RAG","MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1","RICE AGAMOUS","MADS box gene3, MADS-box transcription factor 3, Protein AGAMOUS-like",1," Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0048653 - anther development, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0009908 - flower development, GO:0030154 - cell differentiation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0003700 - transcription factor activity","TO:0000215 - stamen anatomy and morphology trait, TO:0006009 - lodicule anatomy and morphology trait, TO:0000622 - flower development trait, TO:0006023 - lodicule development trait, TO:0000621 - inflorescence development trait","PO:0001049 - lodicule development stage , PO:0009029 - stamen , PO:0009036 - lodicule , PO:0001004 - anther development stage , PO:0007615 - flower development stage , PO:0001083 - inflorescence development stage ","Os01g0201700","LOC_Os01g10504.3, LOC_Os01g10504.2, LOC_Os01g10504.1",null,"Os01g0103100","Os10g0188250",1.1900743,0,null,"PRO4","Pro4*, Pro4","PROLAMIN 4","Prolamin4, Prolamin 4, Prolamin-4",7," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",null,null,"Os01g0823500","Os07g0693000","Os06g0194900",1.9279588,0,null,"BL4","bl4","BROWN LEAF SPOT 4","brown leaf spot4, brown leaf spot 4, brown leaf spot-4",3," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000063 - mimic response, TO:0000069 - variegated leaf, TO:0000326 - leaf color","PO:0009025 - vascular leaf ",null,null,"Os05g0497600","Os05g0497600","Os08g0561700",3.1164343,3.2064326,null,"SNB","AP2/EREBP#073, AP2/EREBP73, AP2-3, SSH1, OsSSH1, OsSNB, DLN181, DLN181a, DLN181b, OsDLN181, OsDLN181a, OsDLN181b, SUI4, OsSUI4, SUI4/SNB","SUPERNUMERARY BRACT GENE","Supernumerary Bract gene, Supernumerary Bract, SUPERNUMERARY BRACT, supernumerary bract, transcription factor; SNB, APETALA2/ethylene-responsive element binding protein 73, APETALA2-3, suppression of shattering1, DLN repressor 181, DLN motif protein 181, shortened uppermost internode 4",7," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0009736 - cytokinin mediated signaling, GO:0009740 - gibberellic acid mediated signaling, GO:0009908 - flower development, GO:0010077 - maintenance of inflorescence meristem identity, GO:0005634 - nucleus, GO:0045449 - regulation of transcription, GO:0009832 - plant-type cell wall biogenesis, GO:0080006 - internode patterning, GO:0010022 - meristem determinacy, GO:0003700 - transcription factor activity, GO:0048506 - regulation of timing of meristematic phase transition, GO:0010092 - specification of organ identity","TO:0000225 - stamen number, TO:0000207 - plant height, TO:0000209 - palea number, TO:0000671 - pre-flowering flower abortion, TO:0006032 - panicle size, TO:0000436 - spikelet sterility, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000391 - seed size, TO:0006030 - spikelet meristem identity, TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000622 - flower development trait, TO:0000650 - lemma length, TO:0000208 - lemma number, TO:0000499 - flower anatomy and morphology trait, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009034 - flower bract , PO:0009036 - lodicule , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0235800","LOC_Os07g13170.2, LOC_Os07g13170.1",null,null,"Os03g0183000",-1.3754607,0]
[{"$nulls":6},"Os02g0572900","LOC_Os02g36360",-1.0505309,"Os04g0341900","LOC_Os04g27410","MYB_related",2.324516,{"$nulls":10},"Os02g0733300","Os05g0424300","Os03g0314400","Os03g0314400",-1.4297034,-1.3869253,null,"Os11g0566800",5.892258,"Os01g0701700",-2.0907042,{"$nulls":17},"Os07g0586200",4.5226154,4.156663,{"$nulls":9},"_","OsLFNR2, LFNR2, FNR, LFNR1, Os-LFNR1, OsLFNR1, PetH-1","_","leaf-type ferredoxin-NADP+-oxidoreductase 2, leaf-type FNR 2, Fd NADP+ oxidoreductase 2, Leaf\nFerredoxin-NADP+ Reductase, leaf FNR",6," Biochemical character,  Vegetative organ - Leaf","GO:0048046 - apoplast, GO:0050660 - FAD binding, GO:0031977 - thylakoid lumen, GO:0045157 - electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity, GO:0004324 - ferredoxin-NADP+ reductase activity, GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, GO:0009817 - defense response to fungus, incompatible interaction, GO:0009941 - chloroplast envelope, GO:0009767 - photosynthetic electron transport chain, GO:0008266 - poly(U) RNA binding, GO:0003959 - NADPH dehydrogenase activity, GO:0050661 - NADP or NADPH binding, GO:0042742 - defense response to bacterium, GO:0009570 - chloroplast stroma, GO:0009535 - chloroplast thylakoid membrane, GO:0006810 - transport",null,null,"Os06g0107700","LOC_Os06g01850.1",null,"Os02g0683500","Os10g0556200","Os06g0237502",0,1.0056585,null,"HOX12","Oshox12, OsHox12","HOMEOBOX GENE 12","rice homeobox gene 12, Homeobox-leucine zipper protein HOX12, Homeodomain transcription factor HOX12, HD-ZIP protein HOX12",3," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0030912 - response to deep water, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0010336 - gibberellic acid homeostasis, GO:0009685 - gibberellin metabolic process, GO:0005634 - nucleus","TO:0001002 - inflorescence exsertion, TO:0002675 - gibberellic acid content, TO:0000524 - submergence tolerance","PO:0009049 - inflorescence ","Os03g0198600","LOC_Os03g10210.1",null,"Os03g0176800","Os01g0856500",1.1745979,0,null,"UNB","Unb, Un2","UNEVEN GRAIN B","Uneven grain B, Uneven grain-b, Uneven grain-2",7," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000287 - brown rice shape","PO:0009010 - seed , PO:0009038 - palea ",null,null,"Os02g0134200","Os03g0157300","Os01g0507000",1.9223205,0,null,"D14","d14(d10), dwf13, d10, d14, D88, HTD2, OsD14, qPPB3, D88/D14, HTD4","DWARF KAMIKAWABUNWAI TILLERING","kamikawabunwai tillering dwarf, dwarf-14, DWARF14, dwarf 14, Dwarf 88, HIGH-TILLERING DWARF 2, Primary panicle branch number 3, high-tillering dwarf 4",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0009755 - hormone-mediated signaling, GO:0007275 - multicellular organismal development, GO:0016787 - hydrolase activity, GO:0042594 - response to starvation, GO:0009610 - response to symbiotic fungus","TO:0000207 - plant height, TO:0000011 - nitrogen sensitivity, TO:0002688 - leaf lamina joint bending, TO:0002639 - shoot branching, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000576 - stem length, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0000544 - mesocotyl length, TO:0000329 - tillering ability, TO:0000339 - stem thickness","PO:0006343 - axillary shoot system , PO:0009047 - stem ","Os03g0203200","LOC_Os03g10620.1, LOC_Os03g10620.3, LOC_Os03g10620.2","Os07g0686600","Os07g0686600","Os08g0498400",2.4886177,3.198269,null,"TGW6","tgw6, OsSTRL7, STRL7","TOTAL GRAIN WEIGHT6","total grain weight6, THOUSAND-GRAIN WEIGHT 6, STR-like 7",6," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009058 - biosynthetic process, GO:0016844 - strictosidine synthase activity, GO:0009683 - indoleacetic acid metabolic process, GO:0005783 - endoplasmic reticulum, GO:0016020 - membrane, GO:0016788 - hydrolase activity, acting on ester bonds","TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000734 - grain length",null,"Os06g0623700","LOC_Os06g41850.1",null,null,"Os06g0270900",-1.4823111,0]
[{"$nulls":6},"Os06g0502900","LOC_Os06g30710",-1.046475,"Os05g0589400","LOC_Os05g51160","MYB_related",5.3580303,{"$nulls":10},"Os09g0533900","Os01g0846800","Os02g0506500","Os02g0506500",-1.438281,-1.0128212,null,"Os06g0483200",5.8922486,"Os01g0597800",-2.084027,{"$nulls":17},"Os01g0190300",0,1.2362556,{"$nulls":9},"PSAF","Usaf, OsPS1-F, PS1-F","PHOTOSYSTEM I SUBUNIT","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0015979 - photosynthesis, GO:0009538 - photosystem I reaction center","TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000346 - tiller number","PO:0025034 - leaf ","Os03g0778100","LOC_Os03g56670.1, LOC_Os03g56670.2",null,"Os12g0163600","Os03g0128700","Os01g0883800",-2.0003462,1.0044001,null,"ASA","OsNIP3;1, NIP3;1, NIP3-1, OsNIP3.1, NIP3.1, OsASA","APICAL SPIKELET ABORTION","Aquaporin NIP3-1, NOD26-like intrinsic protein 3-1, nodulin 26-like intrinsic protein 3-1, apical spikelet abortion",10," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048656 - tapetal layer formation, GO:0055085 - transmembrane transport, GO:0009556 - microsporogenesis, GO:0010036 - response to boron, GO:0009555 - pollen development, GO:0009536 - plastid, GO:0005215 - transporter activity, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0010337 - regulation of salicylic acid metabolic process, GO:0016020 - membrane, GO:0010229 - inflorescence development, GO:0016021 - integral to membrane","TO:0000346 - tiller number, TO:0000605 - hydrogen peroxide content, TO:0000421 - pollen fertility, TO:0006011 - lodicule shape, TO:0000210 - anther number, TO:0000187 - anther color, TO:0000621 - inflorescence development trait, TO:0000214 - anther shape, TO:0000614 - lemma shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height","PO:0001007 - pollen development stage , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0009053 - peduncle , PO:0001083 - inflorescence development stage , PO:0005004 - shoot node , PO:0005352 - xylem , PO:0000074 - parenchyma cell ","Os10g0513200","LOC_Os10g36924.1",null,"Os05g0421900","Os02g0777800",1.0892912,0,null,"G1","g1 (lng), lng, g1, ELE, OsG1, G1/ELE, LSL2, OsLSL2","LONG STERILE LEMMAS 1","long sterile lemmas1, long sterile lemmas 1, long sterile lemmas-1, elongated empty glume, long sterile lemma/glume1, long sterile lemma 2",7," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010029 - regulation of seed germination, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009909 - regulation of flower development, GO:0009416 - response to light stimulus, GO:0009299 - mRNA transcription, GO:0048449 - floral organ formation","TO:0002726 - sterile lemma shape, TO:0000622 - flower development trait, TO:0000430 - germination rate, TO:0000657 - spikelet anatomy and morphology trait, TO:0020033 - glume length, TO:0000240 - sterile lemma length, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0139300","LOC_Os07g04670.1",null,"Os07g0603700","Os02g0819400",1.8957299,0,null,"GRHA","Grha(t)*, Grha, Grh2","GREEN RICE LEAFHOPPER RESISTANCE A","Green rice leafhopper resistance A, Green rice leafhopper resistance-2",3," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os03g0736500","Os03g0736500","Os07g0424400",3.7829869,3.1942482,null,"WRKY19","OsWRKY19","WRKY GENE 19","Rice WRKY gene19",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009790 - embryonic development, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0050832 - defense response to fungus","TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os05g0571200","LOC_Os05g49620.1",null,null,"Os08g0120000",-1.5058984,0]
[{"$nulls":6},"Os12g0515500","LOC_Os12g33090",-1.0432993,"Os10g0562100","LOC_Os10g41260","MYB_related",-1.7148021,{"$nulls":10},"Os03g0736300","Os02g0605900","Os01g0733200","Os01g0733200",-1.8073872,-1.5364038,null,"Os04g0359100",5.884866,"Os01g0930400",-2.081079,{"$nulls":17},"Os08g0428400",2.029749,1.5630218,{"$nulls":9},"ELL","chlI, OsChlI, ChlI, CHLI, OsCHLI, OsCHLI/ELL, OsELL","ETIOLATED LEAF AND LETHAL","Magnesium-chelatase subunit chlI, magnesium chelatase subunit ChlI, MgCh I subbing, Mg-chelatase I subunit, etiolated leaf and lethal",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0016851 - magnesium chelatase activity, GO:0006200 - ATP catabolic process, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0009570 - chloroplast stroma, GO:0009658 - chloroplast organization, GO:0015995 - chlorophyll biosynthetic process, GO:0015979 - photosynthesis, GO:0005618 - cell wall, GO:0009507 - chloroplast","TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait",null,"Os03g0563300","LOC_Os03g36540.2, LOC_Os03g36540.1",null,"Os04g0665600","Os01g0719100","Os09g0380200",1.5105882,0.96530086,null,"LPS1","SDH2, SDHB, sdhB, RPS14, rps14, sdh2-1, SDH2-RPS14, OsLPS1, OsSDH2-1","LATE PREMATURE SENESCENCE 1","SUCCINATE:UBIQUINONE OXIDOREDUCTASE, mitochondrial succinate dehydrogenase subunit B, ribosomal protein S14, succinate dehydrogenase (iron-sulphur protein subunit), chimeric SDH2-RPS14",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion, GO:0006099 - tricarboxylic acid cycle, GO:0009055 - electron carrier activity, GO:0016491 - oxidoreductase activity, GO:0009658 - chloroplast organization, GO:0007005 - mitochondrion organization, GO:0000104 - succinate dehydrogenase activity, GO:0010150 - leaf senescence, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000249 - leaf senescence, TO:0000040 - panicle length, TO:0002715 - chloroplast development trait, TO:0000447 - filled grain number, TO:0000522 - stomatal conductance, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0000621 - inflorescence development trait, TO:0000639 - seed fertility, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content, TO:0006032 - panicle size, TO:0001015 - photosynthetic rate, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0009072 - plant ovary , PO:0000025 - root tip , PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os08g0120000","LOC_Os08g02640.1, LOC_Os08g02640.2, LOC_Os08g02640.3, LOC_Os08g02640.4, LOC_Os08g02640.5",null,"Os04g0398000","Os06g0164400",1.0836405,0,null,"RC","Rc, OsbHLH017, OsbHLH17, SD7-1, qSD7-1/qPC7, OsGL3C, GL3C","BROWN PERICARP AND SEED COAT","Brown pericarp and seed coat, basic/helix-loop-helix 17, basic helix loop helix 17, GLABRA3C, GLABRA 3C",7," Coloration - Others,  Seed - Physiological traits - Dormancy","GO:0009812 - flavonoid metabolic process, GO:0010023 - proanthocyanidin biosynthetic process, GO:0046283 - anthocyanin metabolic process","TO:0000707 - pericarp color, TO:0000190 - seed coat color, TO:0000487 - endosperm color","PO:0009088 - seed coat , PO:0009089 - endosperm ","Os07g0211500","LOC_Os07g11020.1",null,"Os01g0172400","Os03g0858800",1.8806342,0,null,"SPL3","spl3(bl4), spl3, bl4","SPOTTED LEAF 3","spotted leaf3, spotted leaf 3, spotted leaf-3",3," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os03g0712800","Os03g0712800","Os03g0146800",5.932693,3.1894805,null,"WRKY74","OsWRKY74","WRKY GENE 74","Rice WRKY gene74",9," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0043565 - sequence-specific DNA binding, GO:0016036 - cellular response to phosphate starvation, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0010106 - cellular response to iron ion starvation, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0006995 - cellular response to nitrogen starvation, GO:0009408 - response to heat","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000011 - nitrogen sensitivity, TO:0000043 - root anatomy and morphology trait","PO:0009005 - root , PO:0025034 - leaf ","Os09g0334500","LOC_Os09g16510.1",null,null,"Os01g0142300",-1.5335928,0]
[{"$nulls":6},"Os05g0464300","LOC_Os05g38880",-1.0324746,"Os01g0667000","LOC_Os01g47670","NAC",-2.1051662,{"$nulls":10},"Os05g0129200","Os12g0233800","Os02g0245100","Os02g0245100",-1.9418205,-0.9853433,null,"Os02g0276200",5.881265,"Os06g0542300",-2.0765414,{"$nulls":17},"Os05g0455500",2.5600822,1.34377,{"$nulls":9},"4CL5","Os4CL5, 4CL3, Os4CL3","4-COUMARATE:COENZYME A LIGASE 5","4-coumarate:coenzyme A ligase 5, 4-hydroxycinnamate CoA ligase 3",8," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009718 - anthocyanin biosynthetic process, GO:0009698 - phenylpropanoid metabolic process, GO:0009807 - lignan biosynthetic process, GO:0009408 - response to heat, GO:0052386 - cell wall thickening, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016207 - 4-coumarate-CoA ligase activity","TO:0000074 - blast disease, TO:0000432 - temperature response trait, TO:0000326 - leaf color, TO:0000731 - lignin content, TO:0000733 - lignin biosynthesis trait",null,"Os08g0448000","LOC_Os08g34790.1",null,"Os03g0308200","Os02g0618200","Os03g0170900",0,0.96311694,null,"CLF","OsSET24, SDG711, EZ1, OsCLF, OsSDG711","CURLY LEAF","SET protein 24, polycomb protein EZ1, SET DOMAIN GROUP 711",6," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010228 - vegetative to reproductive phase transition, GO:0005982 - starch metabolic process, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0031519 - PcG protein complex, GO:0016571 - histone methylation, GO:0009965 - leaf morphogenesis, GO:0009790 - embryonic development, GO:0051567 - histone H3-K9 methylation, GO:0045857 - negative regulation of molecular function, epigenetic, GO:0031047 - gene silencing by RNA, GO:0009294 - DNA mediated transformation, GO:0003700 - transcription factor activity, GO:0006306 - DNA methylation, GO:0010048 - vernalization response, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0048574 - long-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0003677 - DNA binding, GO:0003727 - single-stranded RNA binding, GO:0006349 - genetic imprinting","TO:0006032 - panicle size, TO:0002616 - flowering time, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000391 - seed size","PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem , PO:0009089 - endosperm , PO:0020056 - tegmen ","Os06g0275500","LOC_Os06g16390.1",null,"Os11g0588100","Os04g0566500",1.0733117,0,null,"GE1","ge1, ge, CYP78A13, OsCYP78A13, GE, BG2, GES, OsGE/CYP78B5, CYP78B5, OsCYP78B5","GIANT EMBRYO 1","giant embryo1, giant embryo 1, giant embryo, big grain2, Cytochrome P450 78A13, GIANT EMBRYO, super-giant embryo",7," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity","GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0010229 - inflorescence development, GO:0006521 - regulation of cellular amino acid metabolic process, GO:0043467 - regulation of generation of precursor metabolites and energy, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0080113 - regulation of seed growth, GO:0020037 - heme binding, GO:0019216 - regulation of lipid metabolic process, GO:0009960 - endosperm development","TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000064 - embryo related trait, TO:0000193 - embryo shape, TO:0000113 - giant embryo, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage ","Os07g0603700","LOC_Os07g41240.1",null,"Os06g0163000","Os06g0219700",1.8761514,0,null,"PGI1","Pgi1(Pgia), Pgia, Pgi_1, Pgi1, GPI-A, PHI-A, Pgi-a, PGI-a","PHOSPHOGLUCOISOMERASE 1","Phosphoglucoisomerase1, Phosphoglucoisomerase 1, Phosphoglucoisomerase-1, Glucose-6-phosphate isomerase, cytosolic A, Phosphoglucose isomerase A, Phosphohexose isomerase A",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006096 - glycolysis, GO:0005829 - cytosol, GO:0006094 - gluconeogenesis, GO:0004347 - glucose-6-phosphate isomerase activity",null,null,"Os03g0776000","LOC_Os03g56460.1, LOC_Os03g56460.2, LOC_Os03g56460.3","Os03g0395000","Os03g0395000","Os01g0755500",2.179995,3.188853,null,"LOG1","LOG1, LOG, Log, log","LONELY GUY 1","LONELY GUY, Lonely Guy, lonely guy, Protein LONELY GUY, Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG",1," Vegetative organ - Shoot apical meristem(SAM),  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0048832 - specification of organ number, GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds, GO:0009691 - cytokinin biosynthetic process, GO:0010074 - maintenance of meristem identity, GO:0010083 - regulation of vegetative meristem growth, GO:0010073 - meristem maintenance, GO:0048509 - regulation of meristem development, GO:0010077 - maintenance of inflorescence meristem identity, GO:0010076 - maintenance of floral meristem identity, GO:0009536 - plastid","TO:0000089 - panicle type, TO:0002659 - pistil number, TO:0002660 - cytokinin content, TO:0000050 - inflorescence branching, TO:0000017 - anatomy and morphology related trait, TO:0002759 - grain number","PO:0000229 - flower meristem , PO:0000230 - inflorescence meristem , PO:0009105 - inflorescence branch meristem ","Os01g0588900","LOC_Os01g40630.1, LOC_Os01g40630.2, LOC_Os01g40630.3",null,null,"Os08g0174700",-1.6404195,0]
[{"$nulls":6},"Os04g0444100","LOC_Os04g36650",-1.0263926,"Os01g0672100","LOC_Os01g48130","NAC",3.7783573,{"$nulls":10},"Os01g0949700","Os03g0843100","Os01g0219000","Os01g0219000",-2.054328,-1.0124993,null,"Os12g0186600",5.875082,"Os03g0739700",-2.0760953,{"$nulls":17},"Os07g0273700",5.1888843,4.3932843,{"$nulls":9},"ERF96","DERF12, OsDERF12, OsERF#096, OsERF096, OsERF96, AP2/EREBP#116, AP2/EREBP116, OsAP2, OsAP2.1, OsAP2.2, OsERF36","ETHYLENE RESPONSE FACTOR 96","drought-responsive ethylene response factor 12, drought-responsive ERF 12, ethylene response factor 96, APETALA2/ethylene-responsive element binding protein 116, OsAPETALA2",10," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent",null,"PO:0020039 - leaf lamina ","Os10g0562900","LOC_Os10g41330.2, LOC_Os10g41330.1",null,"Os07g0247100","Os04g0566500","Os11g0499600",7.2071304,0,null,"BSR1","OsRLCK278, RLCK278, PTK15, OsPTK15","BROAD-SPECTRUM RESISTANCE 1","Receptor-like Cytoplasmic Kinase 278, Protein Tyrosine Kinase 15",9," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0006970 - response to osmotic stress","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance","PO:0009030 - carpel , PO:0009066 - anther , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os09g0533600","LOC_Os09g36320.1",null,"Os02g0106100","Os08g0383250",0.9955492,0,null,"ESP1","esp1(rsp1), rsp1, esp1, OsESP1, ESP1/eRF1, eRF1, OseRF1","ENDOSPERM STORAGE PROTEIN 1","endosperm storage protein1, endosperm storage protein 1, endosperm storage protein-1, eukaryotic peptide chain release factor 1",7," Seed - Physiological traits - Storage substances","GO:0033412 - TAG codon-amino acid adaptor activity, GO:0045735 - nutrient reservoir activity, GO:0005829 - cytosol, GO:0048316 - seed development, GO:0006415 - translational termination, GO:0016149 - translation release factor activity, codon specific, GO:0018444 - translation release factor complex, GO:0033411 - TAA codon-amino acid adaptor activity","TO:0002653 - endosperm storage protein content, TO:0000107 - endosperm storage protein-1 content, TO:0000490 - protein composition related trait","PO:0001170 - seed development stage , PO:0009089 - endosperm ","Os07g0587400","LOC_Os07g39870.3, LOC_Os07g39870.2, LOC_Os07g39870.1",null,"Os01g0817700","Os06g0142900",1.8118159,0,null,"BPH2","bph2","BROWN PLANTHOPPER RESISTANCE 2","brown planthopper resistance 2, brown planthopper resistance-2",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os07g0407700","Os07g0407700","Os09g0537700",0,3.1804707,null,"SH5","OsSH5, RI, SH5/RI, OsRI, VPB1, OsVPB1","SHATTERING 5","Shattering-5, erticillate rachis, verticillate primary branch 1",5," Reproductive organ - Inflorescence,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010492 - maintenance of shoot apical meristem identity, GO:0003677 - DNA binding, GO:0009809 - lignin biosynthetic process, GO:0080006 - internode patterning, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0010081 - regulation of inflorescence meristem growth, GO:0048507 - meristem development, GO:0010014 - meristem initiation, GO:0009755 - hormone-mediated signaling, GO:0010077 - maintenance of inflorescence meristem identity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010065 - primary meristem tissue development, GO:0010229 - inflorescence development, GO:0010073 - meristem maintenance","TO:0000142 - secondary branching of inflorescence, TO:0000547 - primary branch number, TO:0000473 - grain shattering, TO:0006020 - shoot apical meristem development, TO:0006014 - phyllotaxy, TO:0000733 - lignin biosynthesis trait, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000052 - primary branching of inflorescence, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000373 - inflorescence anatomy and morphology trait","PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0006327 - spikelet meristem ","Os05g0455200","LOC_Os05g38120.1",null,null,"Os04g0656100",-1.651204,0]
[{"$nulls":6},"Os02g0506500","LOC_Os02g30310",-1.0128212,"Os01g0675800","LOC_Os01g48446","NAC",-1.7036854,{"$nulls":10},"Os01g0949750","Os10g0567000","Os05g0460000","Os05g0460000",-2.195695,-1.8242869,null,"Os12g0541300",5.8683686,"Os02g0782500",-2.0676515,{"$nulls":17},"Os08g0345800",2.1964571,2.5752084,{"$nulls":9},"YGL13","OsSIG1, SIG1, Os-SigA, OsSigA, Os Sig1, SIGA","YELLOW-GREEN LEAF 13","Sigma factor SIG1, plastid sigma factor SIG1, sigma A, sigma factor A, yellow-green leaf 13, yellow green leaf 13",8," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Other","GO:0009416 - response to light stimulus, GO:0009658 - chloroplast organization, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0016987 - sigma factor activity, GO:0006352 - transcription initiation","TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000180 - spikelet fertility, TO:0000447 - filled grain number, TO:0000207 - plant height, TO:0000496 - carotenoid content",null,"Os08g0163400","LOC_Os08g06630.3, LOC_Os08g06630.1",null,"Os12g0104400","Os02g0116600","Os04g0552300",7.1036925,0,null,"RSR1","AP2/EREBP#090, AP2/EREBP90, OsTOE1, TOE1, qHD5, AP2-1, AP2/EREBP/RSR1, OsRSR1, DLN130, DLN130a, DLN130b, OsDLN130, OsDLN130a, OsDLN130b","RICE STRACH REGULATOR 1","AP2/EREBP family transcription factor, APETALA2/ethylene-responsive element binding protein 90, Rice Starch Regulator1, APETALA2-1, DLN repressor 130, DLN motif protein 130",5," Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process, GO:0010228 - vegetative to reproductive phase transition, GO:0010077 - maintenance of inflorescence meristem identity, GO:0009887 - organ morphogenesis, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0048573 - photoperiodism, flowering, GO:0048437 - floral organ development","TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0006032 - panicle size, TO:0006030 - spikelet meristem identity",null,"Os05g0121600","LOC_Os05g03040.3, LOC_Os05g03040.2, LOC_Os05g03040.1",null,"Os02g0120500","Os05g0196500",0.96040744,0,null,"SHR2","shr2, sh2","SHRUNKEN ENDOSPERM 2","shrunken endosperm2, shrunken endosperm 2, shrunken endosperm-2",8," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain","TO:0000266 - chalky endosperm, TO:0000100 - shrunken endosperm, TO:0000587 - endosperm quality","PO:0009089 - endosperm ",{"$nulls":3},"Os10g0562700","Os02g0626100",1.7492199,0,null,"GLH","Glh(t)*, Glh, Glh14","GREEN LEAFHOPPER RESISTANCE","Green leafhopper resistance, Green leafhopper resistance-14",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os11g0210300","Os11g0210300","Os03g0100800",4.164438,3.1755283,null,"AMY3D","Amy3D/E*(RAmy3D/E), alpha Amy3, AmyII-4, AMY1.3, Amy3D, Amy3D/E*, RAmy3D/E, Amy3D_E, Amy8, aAmy3, RAmy3D, OsAmy3D, alphaAmy3","ALPHA-AMYLASE 3D","Alpha-amylase3D, Alpha-amylase isozyme 3D precursor, Alpha-amylase isozyme 3D, Alpha-amylase-3D, Amylase-8",8," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009413 - response to flooding, GO:0009873 - ethylene mediated signaling pathway, GO:0033500 - carbohydrate homeostasis, GO:0045927 - positive regulation of growth, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009723 - response to ethylene stimulus, GO:0009408 - response to heat","TO:0000253 - seed dormancy, TO:0000432 - temperature response trait, TO:0000168 - abiotic stress trait, TO:0000280 - seedling vigor, TO:0000173 - ethylene sensitivity, TO:0000259 - heat tolerance, TO:0000114 - flooding related trait, TO:0000449 - grain yield per plant",null,"Os08g0473900","LOC_Os08g36910.3, LOC_Os08g36910.2, LOC_Os08g36910.1",null,null,"Os08g0109300",-1.7711678,0]
[{"$nulls":6},"Os01g0219000","LOC_Os01g11970",-1.0124993,"Os02g0594800","LOC_Os02g38130","NAC",1.3745664,{"$nulls":10},"Os09g0467200","Os11g0705200","Os09g0460300","Os09g0460300",-2.3396719,1.5051641,null,"Os03g0128000",5.80463,"Os06g0588800",-2.0589373,{"$nulls":17},"Os01g0850700",0,6.7043138,{"$nulls":9},"SD37","OsCYP96B4, CYP96B4, CYP96B4/SD37, OsDSS1, DSS1, CFL2, OsCFL2, CFL2/OsCYP96B4, BSHT1, OsBSHT1, BSHT1/OsCYP96B4","SEMIDWARF 37","Cytochrome P450 96B4, P-450 96B4, semi-dwarf 37, curled flag leaf 2",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding, GO:0010029 - regulation of seed germination, GO:0005783 - endoplasmic reticulum, GO:0005506 - iron ion binding, GO:0006629 - lipid metabolic process, GO:0051301 - cell division, GO:0004497 - monooxygenase activity, GO:0009414 - response to water deprivation, GO:0048366 - leaf development, GO:0030244 - cellulose biosynthetic process, GO:0016049 - cell growth","TO:0000300 - glucose content, TO:0000207 - plant height, TO:0002675 - gibberellic acid content, TO:0002667 - abscisic acid content, TO:0000276 - drought tolerance, TO:0002637 - leaf size, TO:0006032 - panicle size, TO:0000391 - seed size, TO:0000731 - lignin content, TO:0000655 - leaf development trait, TO:0000478 - abscisic acid concentration","PO:0001050 - leaf development stage , PO:0020148 - shoot apical meristem ","Os03g0140400","LOC_Os03g04680.1","LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","Os10g0520700","Os09g0114500","Os11g0141900",6.828964,0,null,"CLPC3","ClpC3, OsCLPC3","CLASS I CLP ATPASE C3","class I Clp ATPase C3",11," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003677 - DNA binding, GO:0006289 - nucleotide-excision repair, GO:0004518 - nuclease activity, GO:0019538 - protein metabolic process, GO:0017111 - nucleoside-triphosphatase activity, GO:0008233 - peptidase activity, GO:0005515 - protein binding","TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000152 - panicle number, TO:0000421 - pollen fertility, TO:0000040 - panicle length",null,"Os11g0267400","LOC_Os11g16590.1",null,"Os05g0203800","Os01g0234900",0.95995265,0,null,"SK2(T)(SCL, FGR)","sk2(t)(scl, fgr), fgr, scl, BAD2, BADH2, sk2, OsBADH2, Badh2, badh2, Os2AP, BADH-2, OsALDH10A8, ALDH10A8","SCENTED KERNEL 2","scented kernel2, scented kernel 2, fragrance, betaine-aldehyde dehydrogenase 2, betaine aldehyde dehydrogenase 2, scented kernel-2, betaine aldehyde dehydrogenase-2, Aldehyde dehydrogenase 10A8",8," Biochemical character,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0005777 - peroxisome, GO:0008802 - betaine-aldehyde dehydrogenase activity, GO:0006950 - response to stress, GO:0009507 - chloroplast, GO:0009698 - phenylpropanoid metabolic process, GO:0031456 - glycine betaine biosynthetic process, GO:0009413 - response to flooding","TO:0000286 - submergence sensitivity, TO:0000087 - aroma","PO:0009011 - plant structure , PO:0000003 - whole plant , PO:0009010 - seed ","Os08g0424500","LOC_Os08g32870.1",null,"Os03g0737701","Os04g0169100",1.7343351,0,null,"GLUP3","glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3","GLUTELIN PRECURSOR 3","glutelin precursor3, glutelin precursor 3, glutelin precursor-3, vacuolar processing enzyme 1, legumain 3",4," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0006508 - proteolysis, GO:0045735 - nutrient reservoir activity, GO:0000327 - lytic vacuole within protein storage vacuole, GO:0008234 - cysteine-type peptidase activity","TO:0000429 - salt sensitivity, TO:0000109 - endosperm storage protein-2 content, TO:0000615 - abscisic acid sensitivity, TO:0000164 - stress trait, TO:0000490 - protein composition related trait","PO:0009089 - endosperm ","Os04g0537900","LOC_Os04g45470.1","Os05g0349700","Os05g0349700","Os05g0375400",0,3.1620057,null,"SPL4","OsSPL4","RICE SQUAMOSA PROMOTER-BINDING-LIKE 4","Squamosa promoter-binding-like protein 4",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0003677 - DNA binding, GO:0051302 - regulation of cell division, GO:0045449 - regulation of transcription, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0006350 - transcription, GO:0008270 - zinc ion binding, GO:0010229 - inflorescence development","TO:0000142 - secondary branching of inflorescence, TO:0000050 - inflorescence branching, TO:0000449 - grain yield per plant, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0000399 - grain thickness, TO:0000456 - spikelet number, TO:0000612 - seed density, TO:0000052 - primary branching of inflorescence","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0174100","LOC_Os02g07780.1, LOC_Os02g07780.2",null,null,"Os05g0395300",-1.8155246,0]
[{"$nulls":6},"Os01g0274800","LOC_Os01g16810",-0.993018,"Os02g0623300","LOC_Os02g41450","NAC",3.0280483,{"$nulls":10},"Os12g0123200","Os10g0157400","Os03g0729000","Os03g0729000",-2.3566425,-1.8073081,null,"Os01g0778500",5.797329,"Os02g0632700",-2.0553029,{"$nulls":17},"Os01g0938100",3.2042682,4.273134,{"$nulls":9},"GIF3","OsGIF3, OsGIF1, GIF1, MKB3","GRF-INTERACTING FACTOR 3","GRF1-interacting factor 3, GRF-interacting factor 3, Growth-regulating factor interacting factor 1, GRF interacting factor 1, MAKIBA3, MAKIBA 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008283 - cell proliferation, GO:0022414 - reproductive process, GO:0016049 - cell growth, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0009555 - pollen development, GO:0048481 - ovule development, GO:0048366 - leaf development, GO:0009955 - adaxial/abaxial pattern formation, GO:0080060 - integument development","TO:0002686 - cell growth and development trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0000370 - leaf width, TO:0000084 - root number, TO:0000306 - root thickness, TO:0000484 - seed shape, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000655 - leaf development trait, TO:0000485 - sterility related trait, TO:0002637 - leaf size, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait","PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0001007 - pollen development stage , PO:0007619 - ovule development stage , PO:0000017 - vascular leaf primordium ","Os03g0733600","LOC_Os03g52320.2, LOC_Os03g52320.1",null,"Os07g0262200","Os10g0555200","Os12g0138500",6.4889946,0,null,"PIN5B","PIN5C, OsPIN5c, OsPIN5b, PIN4","PIN PROTEIN 5B","PIN PROTEIN 5C, PROBABLE AUXIN EFFLUX CARRIER COMPONENT 5C",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0005783 - endoplasmic reticulum, GO:0010252 - auxin homeostasis, GO:0009415 - response to water","TO:0000237 - water stress trait, TO:0000040 - panicle length, TO:0000346 - tiller number",null,"Os08g0529000","LOC_Os08g41720.1",null,"Os03g0215400","Os03g0132800",-0.9512622,0,null,"XA13","xa13, Xa13, Os8N3, Os-8N3, 8N3, OsSWEET11, SWEET11, OsSWEET11/Xa13, Xa13/Os8N3/SWEET11, Os8N3/Xa13, OsSWEET11/Os8N3","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13","Xanthomonas oryzae pv. oryzae resistance 13, Xanthomonas campestris pv. oryzae resistance-13, Xanthomonas oryzae pv. oryzae resistance-13",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0002237 - response to molecule of bacterial origin, GO:0034219 - carbohydrate transmembrane transport, GO:0015770 - sucrose transport, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0005887 - integral to plasma membrane, GO:0005515 - protein binding, GO:0009915 - phloem loading, GO:0006825 - copper ion transport, GO:0006952 - defense response, GO:0051119 - sugar transmembrane transporter activity, GO:0008515 - sucrose transmembrane transporter activity, GO:0010431 - seed maturation, GO:0009960 - endosperm development, GO:0005886 - plasma membrane, GO:0009617 - response to bacterium, GO:0010150 - leaf senescence","TO:0006001 - salt tolerance, TO:0002661 - seed maturation, TO:0000575 - endosperm related trait, TO:0000060 - aborted uni-nucleate stage, TO:0000371 - yield trait, TO:0000249 - leaf senescence, TO:0000540 - leaf area, TO:0000180 - spikelet fertility, TO:0000696 - starch content, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage , PO:0005360 - aleurone layer , PO:0008006 - nucellar epidermis , PO:0008007 - nucellar projection , PO:0020020 - nucellus , PO:0007632 - seed maturation stage , PO:0020128 - leaf margin , PO:0020137 - leaf apex ","Os08g0535200","LOC_Os08g42350.1",null,"Os01g0927600","Os04g0665400",1.7296829,0,null,"GM2","Gm2, Gm-2, GM-2","GALL MIDGE RESISTANCE 2","Gall midge resistance2, Gall midge resistance 2, Gall midge resistance-2",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os08g0191900","Os08g0191900","Os07g0676600",0,3.1322231,null,"SPL7","OsSPL7","RICE SQUAMOSA PROMOTER-BINDING-LIKE 7","Squamosa promoter-binding-like protein 7",4," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0006350 - transcription","TO:0000329 - tillering ability, TO:0000050 - inflorescence branching, TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000371 - yield trait",null,"Os04g0551500","LOC_Os04g46580.1",null,null,"Os04g0106300",-1.8234681,0]
[{"$nulls":6},"Os02g0324700","LOC_Os02g21920",-0.9914401,"Os02g0810900","LOC_Os02g56600","NAC",2.6135428,{"$nulls":10},"Os10g0527800","Os03g0764900","Os10g0567000","Os10g0567000",-2.5941348,-1.4640685,null,"Os04g0121100",5.7939086,"Os04g0286300",-2.0525486,{"$nulls":17},"Os03g0773700",0,4.5269656,{"$nulls":9},"SAPK10","OsSAPK10, OsSnRK2.10, SnRK2.10","STRESS/ABA-ACTIVATED PROTEIN KINASE 10","stress/ABA-activated protein kinase 10, Stress-Activated Protein Kinase 10, Osmotic stress/abscisic acid-activated protein kinase 10, Sucrose nonfermenting-1-related protein kinase 2.10",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling","TO:0000131 - leaf water potential, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0002665 - root hair length","PO:0000293 - guard cell ","Os03g0610900","LOC_Os03g41460.1","LOC_Os03g05390.13, LOC_Os03g05390.12, LOC_Os03g05390.11, LOC_Os03g05390.10, LOC_Os03g05390.9, LOC_Os03g05390.8, LOC_Os03g05390.7, LOC_Os03g05390.6, LOC_Os03g05390.5, LOC_Os03g05390.4, LOC_Os03g05390.3, LOC_Os03g05390.2, LOC_Os03g05390.1","Os10g0573000","Os02g0768600","Os01g0795400",6.3875213,0,null,"GH3-2","OsGH3-2, OsGH3.2, GH3.2","GRETCHENHAGEN 3-2","OsGRETCHENHAGEN3-2, GRETCHENHAGEN3-2, GRETCHEN HAGEN3-2",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits,  Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009683 - indoleacetic acid metabolic process, GO:0010252 - auxin homeostasis, GO:0005737 - cytoplasm, GO:0016881 - acid-amino acid ligase activity, GO:0009416 - response to light stimulus, GO:0009733 - response to auxin stimulus, GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0051607 - defense response to virus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0002667 - abscisic acid content, TO:0000345 - seed viability, TO:0000435 - seed longevity, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000135 - leaf length, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root , PO:0009010 - seed , PO:0009066 - anther , PO:0009049 - inflorescence ","Os01g0764800","LOC_Os01g55940.1",null,"Os04g0282400","Os07g0497100",-0.9551296,0,null,"SUG","sug(su), su, sug1, su1, su-1","SUGARY ENDOSPERM","sugary endosperm, sugary endosperm-1, sugary-1, sugary",8," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain","TO:0002658 - starch grain synthesis, TO:0000099 - sugary endosperm, TO:0000196 - amylose content, TO:0000587 - endosperm quality","PO:0009089 - endosperm ",{"$nulls":3},"Os02g0777800","Os01g0718300",1.7013999,0,null,"NAL1","nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4","NARROW LEAF 1","narrow leaf1, narrow leaf 1, narrow leaf-1, curl leaf-1, Green for photosysthesis, SPIKELET NUMBER",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003824 - catalytic activity, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0008152 - metabolic process","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0000089 - panicle type, TO:0000262 - panicle shape, TO:0000495 - chlorophyll content, TO:0000370 - leaf width, TO:0000396 - grain yield, TO:0000456 - spikelet number, TO:0000492 - leaf shape, TO:0000346 - tiller number","PO:0009025 - vascular leaf , PO:0020103 - flag leaf ","Os04g0615000","LOC_Os04g52479.1, LOC_Os04g52479.2, LOC_Os04g52479.3","Os02g0154200","Os02g0154200","Os01g0645200",0,3.1301339,null,"GLW7 ","OsSPL13, SPL13","GRAIN LENGTH AND WEIGHT ON CHROMOSOME 7 ","Squamosa promoter-binding-like protein 13, RICE SQUAMOSA PROMOTER-BINDING-LIKE 13, GRAIN LENGTH AND WIEIGHT ON CHROMOSOME 7",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0030307 - positive regulation of cell growth, GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0010050 - vegetative phase change, GO:0005634 - nucleus","TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000357 - growth and development trait",null,"Os07g0505200","LOC_Os07g32170.2, LOC_Os07g32170.1",null,null,"Os01g0160800",-2.0618272,0]
[{"$nulls":6},"Os02g0806300","LOC_Os02g56250",-0.9889768,"Os03g0327100","LOC_Os03g21030","NAC",-1.2523727,{"$nulls":10},"Os01g0371500","Os05g0564400","Os07g0633200","Os07g0633200",-2.770459,-1.363359,null,"Os01g0914400",5.7845006,"Os03g0797500",-2.0483215,{"$nulls":17},"Os02g0733300",3.2091076,1.841709,{"$nulls":9},"SPX1","OsSPX1","SPX DOMAIN PROTEIN 1","SPX (SYG/PHO81/XPR1) domain gene 1, SPX domain protein 1",6," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0070482 - response to oxygen levels, GO:0010167 - response to nitrate, GO:0016036 - cellular response to phosphate starvation, GO:0048016 - inositol phosphate-mediated signaling, GO:0042594 - response to starvation, GO:0080040 - positive regulation of cellular response to phosphate starvation, GO:0070417 - cellular response to cold, GO:0055062 - phosphate ion homeostasis","TO:0000303 - cold tolerance, TO:0002657 - oxidative stress, TO:0000102 - phosphorus sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0000015 - oxygen sensitivity",null,"Os06g0603600","LOC_Os06g40120.1","LOC_Os01g12710.2, LOC_Os01g12710.1","Os01g0511600","Os01g0885000","Os08g0473600",6.2063766,0,null,"PL3","OsPL3","_","PLUS3 domain-containing protein",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016593 - Cdc73/Paf1 complex, GO:0003677 - DNA binding","TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000455 - seed set percent","PO:0025034 - leaf ","Os01g0775100","LOC_Os01g56780.3, LOC_Os01g56780.2, LOC_Os01g56780.1",null,"Os07g0176600","Os03g0757500",-0.96391296,0,null,"DU2120","du2120*, du10, du2120","DULL ENDOSPERM 2120","dull endosperm(2120), dull endoaperm (2120), dull endosperm-10",9," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000105 - dull endosperm, TO:0000196 - amylose content","PO:0009089 - endosperm ",{"$nulls":3},"Os05g0530500","Os03g0650000",1.633223,0,null,"OCP","ocp*, ocp","ORYZAIN ALPHA CHAIN","oryzain alpha chain, Oryzain alpha chain precursor, oryzain alpha, Oryzain alpha-A",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010039 - response to iron ion, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0004197 - cysteine-type endopeptidase activity, GO:0004623 - phospholipase A2 activity, GO:0006508 - proteolysis, GO:0009845 - seed germination, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009611 - response to wounding, GO:0009411 - response to UV, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000160 - UV light sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000224 - iron sensitivity","PO:0007057 - 0 seed germination stage ","Os04g0650000","LOC_Os04g55650.1, LOC_Os04g55650.2","Os12g0628400","Os12g0628400","Os06g0132400",1.801102,3.1289246,null,"GW8","SPL16, OsSPL16, SLP1, OsSLP1, qGW8","GRAIN-WIDTH 8","RICE SQUAMOSA PROMOTER-BINDING-LIKE 16, Squamosa promoter-binding-like protein 16, SQUAMOSA promoter-binding-like 16, stunted lemma palea 1, grain-width 8",8," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0008284 - positive regulation of cell proliferation, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0002661 - seed maturation, TO:0000402 - grain width, TO:0000162 - seed quality, TO:0000397 - grain size",null,"Os08g0531600","LOC_Os08g41940.1",null,null,"Os11g0199200",-2.169667,0]
[{"$nulls":6},"Os02g0245100","LOC_Os02g14790",-0.9853433,"Os05g0442700","LOC_Os05g37080","NAC",-1.5360001,{"$nulls":10},"Os03g0135100","Os01g0239100","Os10g0580400","Os10g0580400",-2.7884464,-2.238878,null,"Os03g0859900",5.768721,"Os04g0630800",-2.04272,{"$nulls":17},"Os03g0856700",1.9106296,1.865975,{"$nulls":9},"NYC4","OsNYC4, THF1, OsTHF1","NON-YELLOW COLORING4","thylakoid formation1",7," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0045037 - protein import into chloroplast stroma, GO:0009535 - chloroplast thylakoid membrane, GO:0009707 - chloroplast outer membrane, GO:0010027 - thylakoid membrane organization, GO:0010319 - stromule, GO:0009528 - plastid inner membrane, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence, GO:0010182 - sugar mediated signaling, GO:0045038 - protein import into chloroplast thylakoid membrane, GO:0015996 - chlorophyll catabolic process, GO:0010207 - photosystem II assembly, GO:0009570 - chloroplast stroma","TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os07g0558500","LOC_Os07g37250.1","LOC_Os04g45330.1","Os11g0267000","Os03g0586900","Os08g0151300",5.5473714,0,null,"FBN1","OsFBN1","FIBRILLIN 1","fibrillin 1",9," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0005504 - fatty acid binding, GO:0006629 - lipid metabolic process, GO:0009507 - chloroplast","TO:0000448 - filled grain percentage, TO:0000152 - panicle number, TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0002668 - jasmonic acid content",null,"Os09g0133600","LOC_Os09g04790.1",null,"Os08g0460000","Os11g0544600",-0.98757154,0,null,"GLUP1","Glup1(Esp5, Gup1), Gup1, Esp5, Glup1","GLUTELIN PRECURSOR 1","Glutelin precursor1, Glutelin precursor 1, Glutelin precursor-1",9," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000109 - endosperm storage protein-2 content, TO:0000490 - protein composition related trait","PO:0009089 - endosperm ",{"$nulls":3},"Os08g0445700","Os02g0763000",1.6272846,0,null,"SHO1","sho1, DCL4, OsDCL4, Os DCL4, Dcl4","SHOOT ORGANIZATION 1","shoot organization 1, shoot organization-1, shoot organization1, Endoribonuclease Dicer homolog 4, Dicer-like protein 4, Protein SHOOT ORGANIZATION 1, Oryza sativa dicer-like4, Oryza sativa dicer-like 4, Dicer like 4",4," Vegetative organ - Shoot apical meristem(SAM),  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development, GO:0004525 - ribonuclease III activity, GO:0009944 - polarity specification of adaxial/abaxial axis, GO:0007275 - multicellular organismal development, GO:0010492 - maintenance of shoot apical meristem identity, GO:0030145 - manganese ion binding, GO:0000287 - magnesium ion binding, GO:0010267 - production of ta-siRNAs involved in RNA interference, GO:0008026 - ATP-dependent helicase activity, GO:0003725 - double-stranded RNA binding, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0048608 - reproductive structure development, GO:0004252 - serine-type endopeptidase activity, GO:0005634 - nucleus","TO:0000074 - blast disease, TO:0000492 - leaf shape, TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0009025 - vascular leaf ","Os04g0509300","LOC_Os04g43050.4, LOC_Os04g43050.1","Os01g0894600","Os01g0894600","Os12g0572000",0,3.1233323,null,"HD3A","Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2, OsHd3a","HEADING DATE 3A","heading date 3A, Heading date-3a, Heading date (QTL)-3(t), Flowering locus T, FT-like gene 2",6," Reproductive organ,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0003700 - transcription factor activity, GO:0008429 - phosphatidylethanolamine binding, GO:0010229 - inflorescence development, GO:0005737 - cytoplasm, GO:0005543 - phospholipid binding, GO:0005634 - nucleus, GO:0030154 - cell differentiation, GO:0009909 - regulation of flower development, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0048572 - short-day photoperiodism, GO:0048575 - short-day photoperiodism, flowering, GO:0031210 - phosphatidylcholine binding, GO:0009648 - photoperiodism, GO:0003006 - reproductive developmental process, GO:0009908 - flower development, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0048578 - positive regulation of long-day photoperiodism, flowering","TO:0000455 - seed set percent, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity, TO:0000382 - 1000-seed weight, TO:0000229 - photoperiod sensitivity, TO:0002616 - flowering time, TO:0000469 - days to maturity","PO:0000230 - inflorescence meristem , PO:0009013 - portion of meristem tissue , PO:0009049 - inflorescence , PO:0009082 - spikelet floret , PO:0009003 - sporophyte , PO:0009010 - seed ","Os06g0157700","LOC_Os06g06320.1",null,null,"Os10g0431000",-2.2743814,0]
[{"$nulls":6},"Os02g0654400","LOC_Os02g43750",-0.97860146,"Os05g0563000","LOC_Os05g48850","NAC",3.2179844,{"$nulls":10},"Os03g0785900","Os01g0597800","Os06g0474800","Os06g0474800",-2.9383466,-1.9624877,null,"Os06g0672400",5.759853,"Os09g0112300",-2.0395458,{"$nulls":17},"Os07g0686600",2.438549,2.4509923,{"$nulls":9},"_","OsMYB4, Osmyb4, OsMyb4, MYB4, OsMYB55, MYB55, OsMyb8, MYB8, OsMYB13b, MYB13b","_","Myb transcription factor 4, myb transcription factor 8, transcription factor MYB8",4," Vegetative organ - Leaf,  Coloration,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006351 - transcription, DNA-dependent, GO:0009409 - response to cold, GO:0002238 - response to molecule of fungal origin, GO:0003677 - DNA binding, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0010150 - leaf senescence, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0009964 - negative regulation of flavonoid biosynthetic process","TO:0000255 - sheath blight disease resistance, TO:0000179 - biotic stress trait, TO:0000303 - cold tolerance, TO:0000675 - ferulic acid content, TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence","PO:0025034 - leaf ","Os04g0517100","LOC_Os04g43680.1","LOC_Os05g28200.2, LOC_Os05g28200.1","Os05g0110900","Os07g0497100","Os04g0600900",5.221672,0,null,"NRFG6","OsNRFG6","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 6","neo-tetraploid rice fertility related gene 6",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0048544 - recognition of pollen","TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000152 - panicle number",null,"Os06g0602500","LOC_Os06g40030.1",null,"Os03g0725200","Os02g0579600",-1.0919329,0,null,"GLUP2","glup2(esp6, gup2), esp6, gup2, glup2","GLUTELIN PRECURSOR 2","glutelin precursor2, glutelin precursor 2, glutelin precursor-2",9," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait, TO:0000109 - endosperm storage protein-2 content","PO:0009089 - endosperm ",{"$nulls":3},"Os03g0700400","Os03g0602300",1.5881429,0,null,"TSV1","tsv1(RTSV), RTSV, tsv1","RICE TUNGRO SPHERICAL VIRUS RESISTANCE 1","rice tungro spherical virus resistance1, rice tungro spherical virus resistance 1, rice tungro spherical virus resistance-1",4," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000413 - rice tungro virus resistance",{"$nulls":3},"Os06g0531200","Os06g0531200","Os01g0360200",0,3.1213465,null,"CCA1","OsCCA1, OsLHY, LHY, LHY-like_chr.8, COC1, DLN203, OsDLN203, LEM1, OsLEM1, Nhd1, OsNhd1","CIRCADIAN CLOCK ASSOCIATED 1","LATE ELONGATED HYPOCOTYL, DLN repressor 203, DLN motif protein 203, lvp1 enhancer mutant 1, N-mediated heading date1",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Heterochrony,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010228 - vegetative to reproductive phase transition, GO:0009743 - response to carbohydrate stimulus, GO:0050832 - defense response to fungus, GO:0007623 - circadian rhythm, GO:0042752 - regulation of circadian rhythm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0019740 - nitrogen utilization, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009730 - detection of carbohydrate stimulus, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0002616 - flowering time, TO:0000346 - tiller number","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0000055 - bud , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os08g0157600","LOC_Os08g06110.2, LOC_Os08g06110.5, LOC_Os08g06110.4, LOC_Os08g06110.3",null,null,"Os01g0103100",-2.2874813,0]
[{"$nulls":6},"Os08g0562200","LOC_Os08g44820",-0.9606611,"Os06g0131700","LOC_Os06g04090","NAC",4.2799582,{"$nulls":10},"Os07g0152700","Os12g0129700","Os06g0318600","Os06g0318600",-3.4693987,-1.1053046,null,"Os06g0285400",5.753568,"Os06g0202300",-2.029198,{"$nulls":17},"Os03g0794500",0,1.4252104,{"$nulls":9},"PUT1","OsPUT1, PUT, OsLAT1","POLYAMINE UPTAKE TRANSPORTER 1","PA uptake transporter 1, polyamine uptake transporter 1, Polyamine Uptake Transporter1",2," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date","GO:0005783 - endoplasmic reticulum, GO:0015846 - polyamine transport, GO:2000028 - regulation of photoperiodism, flowering, GO:0015848 - spermidine transport, GO:0016021 - integral to membrane, GO:0015171 - amino acid transmembrane transporter activity, GO:0015606 - spermidine transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0015203 - polyamine transmembrane transporter activity, GO:0015293 - symporter activity, GO:0010150 - leaf senescence","TO:0002616 - flowering time, TO:0000249 - leaf senescence",null,"Os02g0700500","LOC_Os02g47210.1","LOC_Os04g47300.1","Os06g0693200","Os03g0329900","Os02g0630300",5.081969,0,null,"KIN7L","OsKIN7L","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 7L","kinesin motor domain containing protein 7L",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement","TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000371 - yield trait",null,"Os11g0552600","LOC_Os11g35090.1",null,"Os10g0163040","Os10g0370100",-1.0965024,0,null,"GLUP5","Glup5(t)*, Glup5(t), Glup5","GLUTELIN PRECURSOR 5","Glutelin precursor5, Glutelin precursor 5, Glutelin precursor-5",9," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":3},"Os02g0768600","Os07g0693000",1.5852586,0,null,"XA14","Xa14","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 14","Xanthomonas oryzae pv. oryzae resistance 14, Xanthomonas campestris pv. oryzae resistance-14, Xanthomonas oryzae pv. oryzae resistance-14",4," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os01g0702500","Os01g0702500","Os03g0216700",3.3980534,3.1010273,null,"GSN1","MKP1, OsMKP1, osmkp1, LARGE8, GLA1, OsGLA1","GRAIN SIZE AND NUMBER1","Oryza sativa Mitogen-Activated Protein Kinase Phosphatase 1, Mitogen-Activated Protein Kinase Phosphatase 1, MAPK phosphatase 1, large grain8, LARGE GRAIN 8, grain size and number1, grain size and number 1, grain length and awn 1",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008285 - negative regulation of cell proliferation, GO:0045595 - regulation of cell differentiation, GO:0006470 - protein amino acid dephosphorylation, GO:0048316 - seed development, GO:0004725 - protein tyrosine phosphatase activity, GO:0008138 - protein tyrosine/serine/threonine phosphatase activity, GO:0009651 - response to salt stress, GO:0016301 - kinase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0010225 - response to UV-C, GO:0033549 - MAP kinase phosphatase activity, GO:0042127 - regulation of cell proliferation, GO:0005737 - cytoplasm","TO:0000653 - seed development trait, TO:0000181 - seed weight, TO:0000547 - primary branch number, TO:0002660 - cytokinin content, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000557 - secondary branch number, TO:0000072 - awn length, TO:0002759 - grain number, TO:0006032 - panicle size","PO:0009066 - anther , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009047 - stem , PO:0009051 - spikelet , PO:0009039 - glume , PO:0025349 - awn ","Os05g0115800","LOC_Os05g02500.3, LOC_Os05g02500.2, LOC_Os05g02500.1",null,null,"Os02g0823100",-2.4148831,0]
[{"$nulls":6},"Os07g0568300","LOC_Os07g38090",-0.9563233,"Os08g0535800","LOC_Os08g42400","NAC",-1.5443617,{"$nulls":10},"Os07g0468100","Os01g0246700","Os02g0574100","Os02g0574100",-4.260303,-3.042162,null,"Os03g0113000",5.7496285,"Os11g0657900",-2.0279644,{"$nulls":17},"Os01g0524500",0,2.2737515,{"$nulls":9},"ARF8","OsARF8, OsARF12, ARF12","AUXIN RESPONSE FACTOR 8","auxin response factor-8, auxin response factor 8, auxin responsive factor 8, auxin response factor-12, auxin response factor 12",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009926 - auxin polar transport, GO:0070482 - response to oxygen levels, GO:0051607 - defense response to virus, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0050688 - regulation of defense response to virus, GO:0003677 - DNA binding, GO:0006350 - transcription, GO:0009734 - auxin mediated signaling pathway","TO:0000163 - auxin sensitivity, TO:0000015 - oxygen sensitivity, TO:0000148 - viral disease resistance, TO:0000206 - leaf angle, TO:0000567 - tiller angle, TO:0002693 - gravity response trait, TO:0000074 - blast disease, TO:0000401 - plant growth hormone sensitivity","PO:0009005 - root , PO:0025034 - leaf , PO:0020039 - leaf lamina ","Os04g0671900","LOC_Os04g57610.3, LOC_Os04g57610.1","LOC_Os01g41710.1","Os02g0148000","Os11g0544600","Os02g0568200",5.0546517,0,null,"KIN14M","OsKIN14M","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 14M","kinesin motor domain containing protein 14M",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement, GO:0016887 - ATPase activity, GO:0008017 - microtubule binding","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight",null,"Os06g0554700","LOC_Os06g36080.1",null,"Os09g0442100","Os01g0765000",-1.1396238,0,null,"MAN","Man","MANNAN IN ENDOSPERM CELL WALL","Mannan in endosperm cell wall",9," Seed - Physiological traits - Storage substances","GO:0006080 - substituted mannan metabolic process","TO:0000489 - carbohydrate composition related trait","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os08g0557000","Os03g0157300",1.5712484,0,null,"D11","d11(d8), dwf10, d8, D11/CYP724B1, d11, CYP724B1, GNS4, OsD11, PMM1, OsPMM1, PMM1/D11, NBG4, OsCPB1, CPB1, CPB1/D11","DWARF SHINKANEAIKOKU OR NOHRIN 28","shinkaneaikoku or nohrin 28 dwarf, DWARF SHINKANEAIKOKU OR NOHRIN 28, OsDWARF11, dwarf-11, Cytochrome P450 724B1, Dwarf protein 11, cytochrome P450 CYP724B1, DWARF11, grain number and size on chromosome 4, Panicle Morphology Mutant 1, Notched Belly Grain 4, CLUSTERED PRIMARY BRANCH 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0022900 - electron transport chain, GO:0006879 - cellular iron ion homeostasis, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling, GO:0048573 - photoperiodism, flowering, GO:0010029 - regulation of seed germination, GO:0051512 - positive regulation of unidimensional cell growth, GO:0016020 - membrane, GO:0009055 - electron carrier activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009826 - unidimensional cell growth, GO:0006826 - iron ion transport, GO:0009647 - skotomorphogenesis, GO:0008199 - ferric iron binding, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000206 - leaf angle, TO:0000455 - seed set percent, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000484 - seed shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000592 - 1000-dehulled grain weight, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000371 - yield trait, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0002730 - grain shape, TO:0000052 - primary branching of inflorescence, TO:0000396 - grain yield, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000456 - spikelet number, TO:0000391 - seed size, TO:0000329 - tillering ability, TO:0000397 - grain size, TO:0000139 - grains per panicle, TO:0000641 - primary branch length, TO:0000557 - secondary branch number, TO:0000501 - spikelet weight, TO:0000050 - inflorescence branching, TO:0000576 - stem length, TO:0000207 - plant height","PO:0020142 - stem internode , PO:0020122 - inflorescence axis , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009010 - seed , PO:0006321 - primary inflorescence branch ","Os04g0469800","LOC_Os04g39430.2, LOC_Os04g39430.1","Os06g0681600","Os06g0681600","Os03g0121700",1.7039169,3.0898573,null,"GLN1;2","OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1, OsGS1-2, GS1-2, OsGS1.2, GS1.2","GLUTAMINE SYNTHETASE 1;2","cytosolic glutamine synthethase 1;2, cytosolic glutamine synthase 2, glutamine synthetase 1;2, glutamine synthetase 1",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0060359 - response to ammonium ion, GO:0009808 - lignin metabolic process, GO:0009691 - cytokinin biosynthetic process, GO:0019676 - ammonia assimilation cycle, GO:0006542 - glutamine biosynthetic process, GO:0050832 - defense response to fungus, GO:0010223 - secondary shoot formation, GO:0005524 - ATP binding, GO:0004356 - glutamate-ammonia ligase activity, GO:0005737 - cytoplasm, GO:0006529 - asparagine biosynthetic process, GO:0010150 - leaf senescence","TO:0000152 - panicle number, TO:0002660 - cytokinin content, TO:0000333 - sugar content, TO:0002673 - amino acid content, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000249 - leaf senescence","PO:0004709 - axillary bud , PO:0006343 - axillary shoot system , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage ","Os03g0223400","LOC_Os03g12290.1",null,null,"Os11g0184900",-2.4898646,0]
[{"$nulls":6},"Os01g0195000","LOC_Os01g09850",-0.9494095,"Os08g0562200","LOC_Os08g44820","NAC",-0.9606611,{"$nulls":10},"Os10g0529300","Os11g0210500","Os01g0952800","Os01g0952800",-4.5512953,-1.7507919,null,"Os05g0436100",5.746195,"Os07g0642900",-2.0268476,{"$nulls":17},"Os10g0516100",0,4.7640057,{"$nulls":9},"_","OsARF15, ARF15, ETT1, OsETT1, ARF3b, OsARF3-1, ARF3-1, OsARF3, ARF3, DLN154, OsDLN154","_","auxin response factor-15, auxin response factor 15, OsETTIN1, DLN repressor 154, DLN motif protein 154",5," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0090058 - metaxylem development, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009629 - response to gravity, GO:0009734 - auxin mediated signaling pathway","TO:0002693 - gravity response trait, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000614 - lemma shape, TO:0000470 - vascular tissue related trait",null,"Os05g0563400","LOC_Os05g48870.7, LOC_Os05g48870.9, LOC_Os05g48870.8, LOC_Os05g48870.1, LOC_Os05g48870.5, LOC_Os05g48870.6","LOC_Os03g06654.2, LOC_Os03g06654.1","Os03g0232600","Os01g0703600","Os01g0802700",4.8981066,0,null,"PPR756","OsPPR756","PENTATRICOPEPTIDE REPEAT PROTEIN 756","Pentatricopeptide repeat protein 756",12," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009451 - RNA modification, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0009555 - pollen development, GO:0043231 - intracellular membrane-bounded organelle","TO:0000180 - spikelet fertility, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0006032 - panicle size, TO:0000214 - anther shape, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000206 - leaf angle, TO:0000455 - seed set percent","PO:0001007 - pollen development stage , PO:0009047 - stem , PO:0009066 - anther , PO:0009010 - seed ","Os12g0289800","LOC_Os12g19260.1",null,"Os08g0130000","Os07g0222300",-1.176473,0,null,"LAM","lam(t), lam","LOW AMYLOSE ENDOSPERM","low amylose endosperm, low allergenic protein",9," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000098 - glutinous endosperm, TO:0000196 - amylose content, TO:0000266 - chalky endosperm","PO:0009089 - endosperm ",{"$nulls":3},"Os01g0813900","Os07g0603700",1.4216543,0,null,"XA2","Xa2","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 2","Xanthomonas oryzae pv. oryzae resistance 2, Xanthomonas campestris pv. oryzae resistance-2, Xanthomonas oryzae pv. oryzae resistance-2",4," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os01g0283300","Os01g0283300","Os06g0571800",1.420514,3.0469806,null,"SG1","OsSG1, Sg1","SHORT GRAIN 1","SHORT GRAIN1, Short grain 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0008285 - negative regulation of cell proliferation, GO:0048316 - seed development","TO:0000397 - grain size, TO:0000370 - leaf width, TO:0000734 - grain length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000326 - leaf color, TO:0002677 - brassinosteroid sensitivity, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage ","Os09g0459200","LOC_Os09g28520.1",null,null,"Os04g0398000",-2.758197,0]
[{"$nulls":6},"Os01g0165000","LOC_Os01g07120",-0.9488856,"Os10g0477600","LOC_Os10g33760","NAC",1.9038072,{"$nulls":10},"Os10g0530500","Os01g0955100","Os10g0491000","Os10g0491000",-4.852097,-1.8751928,null,"Os05g0450300",5.73869,"Os02g0181900",-2.0256364,{"$nulls":17},"Os07g0229700",3.8663642,3.2081091,{"$nulls":9},"_","OsARF2, ARF2, OsETT2, ETT2, ARF3a, DLN16, OsDLN16, ARF3","_","auxin response factor-2, auxin response factor 2, OsETTIN2, ETTIN 2, DLN repressor 16, DLN motif protein 16, ARF2-LIKE",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0009415 - response to water, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0009629 - response to gravity","TO:0000655 - leaf development trait, TO:0000207 - plant height, TO:0002718 - awn anatomy and morphology trait, TO:0002693 - gravity response trait, TO:0000237 - water stress trait","PO:0009049 - inflorescence ","Os01g0670800","LOC_Os01g48060.3, LOC_Os01g48060.2, LOC_Os01g48060.1","LOC_Os08g44350.1","Os10g0567400","Os06g0301000","Os12g0106300",4.7552133,0,null,"TAC4","OsTAC4","TILLER ANGLE CONTROL 4","Tiller Angle Control 4",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009630 - gravitropism, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009826 - unidimensional cell growth","TO:0000567 - tiller angle, TO:0000447 - filled grain number, TO:0000145 - internode length, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002693 - gravity response trait, TO:0002672 - auxin content, TO:0000547 - primary branch number, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0000040 - panicle length","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0008017 - leaf sheath pulvinus , PO:0020148 - shoot apical meristem , PO:0000232 - axillary bud meristem ","Os02g0450000","LOC_Os02g25230.1",null,"Os02g0663300","Os03g0125800",-1.2777237,0,null,"DU1","du1","DULL ENDOSPERM 1","dull endosperm1, dull endosperm 1, dull endosperm-1",10," Seed - Physiological traits - Storage substances","GO:0005622 - intracellular, GO:0009568 - amyloplast starch grain, GO:0006396 - RNA processing, GO:0019252 - starch biosynthetic process, GO:0005976 - polysaccharide metabolic process","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009005 - root , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0009089 - endosperm , PO:0020039 - leaf lamina , PO:0020104 - leaf sheath ","Os10g0498600","LOC_Os10g35550.1",null,"Os03g0586900","Os01g0172400",1.3577285,0,null,"XA12","Xa12(Xa kg), Xakg, Xa12","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 12","Xanthomonas oryzae pv. oryzae resistance 12, Xanthomonas campestris pv. oryzae resistance-12, Xanthomonas oryzae pv. oryzae resistance-12",4," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os05g0498300","Os05g0498300","Os02g0698000",0,2.9928296,null,"DEP3","dep3, OspPLAIIIdelta, pPLAIIIdelta","DENSE AND ERECT PANICLE 3","dense and erect panicle 3, Patatin-related phospholipase A III delta",6," Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0006629 - lipid metabolic process, GO:0016787 - hydrolase activity","TO:0002759 - grain number, TO:0000396 - grain yield, TO:0000050 - inflorescence branching",null,"Os06g0677000","LOC_Os06g46350.1",null,null,"Os03g0215400",-3.8352463,0]
[{"$nulls":6},"Os01g0136100","LOC_Os01g04370",0.9654362,"Os03g0413000","LOC_Os03g29970","NF-YB",3.2168026,{"$nulls":10},"Os12g0210200","Os09g0484900","Os05g0527000","Os05g0527000",-5.968256,-3.971136,null,"Os06g0142400",5.734848,"Os11g0490900",-2.0225337,{"$nulls":17},"Os03g0198600",0,1.6825858,{"$nulls":9},"ARF6A","OsARF6a, OsARF6, ARF6","AUXIN RESPONSE FACTOR 6A","auxin response factor-6a, auxin response factor 6a, auxin response factor-6, auxin response factor 6, auxin responsive factor 6",2," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0009808 - lignin metabolic process, GO:0030244 - cellulose biosynthetic process, GO:0009733 - response to auxin stimulus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009834 - secondary cell wall biogenesis, GO:0009908 - flower development, GO:0009734 - auxin mediated signaling pathway","TO:0002688 - leaf lamina joint bending, TO:0000396 - grain yield, TO:0000163 - auxin sensitivity, TO:0000074 - blast disease, TO:0000731 - lignin content, TO:0000124 - flag leaf angle","PO:0020039 - leaf lamina , PO:0020103 - flag leaf ","Os02g0164900","LOC_Os02g06910.1","LOC_Os09g39400.2, LOC_Os09g39400.1","Os05g0211100","Os12g0465700","Os04g0271700",4.4586425,0,null,"SYF2","OsSYF2","SYNTHETIC LETHAL WITH CDC FORTY 2","Synthetic lethal with cdc forty 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0071014 - post-mRNA release spliceosomal complex, GO:0071013 - catalytic step 2 spliceosome, GO:0010229 - inflorescence development, GO:0010468 - regulation of gene expression, GO:0006397 - mRNA processing, GO:0080050 - regulation of seed development","TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000050 - inflorescence branching, TO:0000040 - panicle length, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002730 - grain shape","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os06g0711600","LOC_Os06g49740.2, LOC_Os06g49740.1",null,"Os04g0685900","Os03g0215900",-1.2779297,0,null,"GLU2","glu2(t)*, glu9, LGLU2","GLUTELIN 2","lack of glutelin subunit2, lack of glutelin subunit 2, lack of glutelin subunit-2, rice glutelin-9",10," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":3},"Os03g0132800","Os06g0163000",1.324289,0,null,"XA1","Xa1(Xe), Xe, Xa1, Xa-1","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 1","Xanthomonas oryzae pv. oryzae resistance 1, Xanthomonas campestris pv. oryzae resistance-1, Xanthomonas oryzae pv. oryzae resistance-1",4," Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0006915 - apoptosis, GO:0003677 - DNA binding, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance","PO:0009025 - vascular leaf ","Os04g0622600","LOC_Os04g53120.1","Os03g0129300","Os03g0129300","Os01g0741200",0,2.9853084,null,"SWEET4","OsSWEET4","SWEET4",null,2," Biochemical character,  Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0008643 - carbohydrate transport, GO:0015758 - glucose transport, GO:0008645 - hexose transport, GO:0009960 - endosperm development, GO:0051119 - sugar transmembrane transporter activity, GO:0009749 - response to glucose stimulus, GO:0034219 - carbohydrate transmembrane transport, GO:0016021 - integral to membrane, GO:0005887 - integral to plasma membrane, GO:0010150 - leaf senescence, GO:0015757 - galactose transport, GO:0009739 - response to gibberellin stimulus","TO:0000167 - cytokinin sensitivity, TO:0000333 - sugar content, TO:0000166 - gibberellic acid sensitivity, TO:0000249 - leaf senescence, TO:0000100 - shrunken endosperm, TO:0000163 - auxin sensitivity, TO:0002661 - seed maturation","PO:0007633 - endosperm development stage , PO:0001054 - 4 leaf senescence stage , PO:0025196 - basal endosperm transfer layer ","Os02g0301100","LOC_Os02g19820.1",null,null,"Os02g0137800",0,-0.9468778]
[{"$nulls":6},"Os10g0480200","LOC_Os10g33960",0.966623,"Os05g0463800","LOC_Os05g38820","NF-YB",-1.6632209,{"$nulls":10},"Os11g0438700","Os06g0622800","Os01g0607800","Os01g0607800",2.6816509,2.9301584,null,"Os02g0587000",5.7301316,"Os02g0663800",-2.0188782,{"$nulls":17},"Os03g0841800",0,1.6212746,{"$nulls":9},"ARF7A","OsARF7a, OsARF19, ARF19, OsARF7","AUXIN RESPONSE FACTOR 7A","auxin response factor-7a, auxin response factor 7a, auxin response factor-19, auxin response factor 19",6," Vegetative organ - Leaf,  Vegetative organ - Root,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009734 - auxin mediated signaling pathway, GO:0010311 - lateral root formation, GO:0010618 - aerenchyma formation, GO:0003677 - DNA binding","TO:0002672 - auxin content, TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity","PO:0000258 - root cortex , PO:0005029 - root primordium ","Os06g0702600","LOC_Os06g48950.1",null,"Os02g0744900","Os03g0437600","Os11g0107000",4.300106,0,null,"KEAP1","OsKEAP1","KELCH-LIKE ECH-ASSOCIATED PROTEIN 1","Kelch-like ECH-associated protein 1",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0051775 - response to redox state, GO:0009845 - seed germination, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000440 - grain number per plant, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000437 - male sterility, TO:0000615 - abscisic acid sensitivity, TO:0002730 - grain shape, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000430 - germination rate","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage ","Os01g0162500","LOC_Os01g06890.1",null,"Os05g0103200","Os08g0537800",-1.2991232,0,null,"RK2","rk2","ROUND KERNEL 2","round kernel2, round kernel 2, round kernel-2",10," Seed - Morphological traits - Grain shape",null,"TO:0000287 - brown rice shape, TO:0000149 - seed width, TO:0000391 - seed size","PO:0009010 - seed ",{"$nulls":3},"Os03g0757500","Os01g0817700",1.2706674,0,null,"PIKUR1","Pi kur1*, PIKUR1, Pikur1*, Pikur1, RMg9, Pi-kur 1, Pi-kur1","PYRICULARIA ORYZAE RESISTANCE-KUR-1","Pyricularia oryzae resistance-kur-1, Magnaporthe grisea resistance-kur1, Blast resistance kur1",4," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000514 - potassium uptake","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os06g0729000","Os06g0729000","Os05g0472400",0,2.9450293,null,"SAUR32","OsSAUR32","SMALL AUXIN-UP RNA 32","Small auxin-up RNA 32",8," Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009733 - response to auxin stimulus","TO:0000565 - spikelets per panicle length, TO:0000163 - auxin sensitivity",null,"Os08g0118800","LOC_Os08g02530.1",null,null,"Os04g0436100",-1.3397518,-0.97047997]
[{"$nulls":6},"Os08g0481400","LOC_Os08g37580",0.97592384,"Os08g0174500","LOC_Os08g07740","NF-YB",{"$error":"#N/A"},{"$nulls":10},"Os06g0549300","Os01g0734000","Os03g0341000","Os03g0341000",4.300297,-1.8170595,null,"Os06g0314600",5.6807714,"Os01g0965900",-2.0114691,{"$nulls":17},"Os04g0305700",0,5.75091,{"$nulls":9},"ARF10","OsARF10, OsARF18, ARF18","AUXIN RESPONSE FACTOR 10","auxin response factor-10, auxin response factor 10, auxin response factor-18, auxin response factor 18",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Other","GO:0009908 - flower development, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0010481 - epidermal cell division, GO:0048316 - seed development, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000181 - seed weight, TO:0000149 - seed width, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000135 - leaf length, TO:0000346 - tiller number, TO:0000655 - leaf development trait, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000696 - starch content, TO:0002655 - starch grain size, TO:0000180 - spikelet fertility","PO:0007615 - flower development stage , PO:0001170 - seed development stage ","Os06g0685700","LOC_Os06g47150.1, LOC_Os06g47150.2, LOC_Os06g47150.3, LOC_Os06g47150.4",null,"Os12g0168700","Os07g0192300","Os04g0460600",4.1927667,0,null,"CHZ1","OsChz1","Chaperone for H2A.Z-H2B 1","CHZ-domain protein 1",null," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0006325 - chromatin organization, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0048587 - regulation of short-day photoperiodism, flowering","TO:0000397 - grain size, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os11g0544600","LOC_Os11g34190.1",null,"Os03g0856700","Os01g0229300",-1.3393383,0,null,"CHS","CHS*, Oschs, chs, chas, OsCHS, OsCHS1, CHS1, OsPKS26, PKS26, OsCHS24, CHS24","CHALCONE SYNTHASE","Chalcone synthase, Naregenin-chalcone synthase, chalcone synthase, chalcone synthase 1, polyketide synthase 26, Chalcone synthase 24",11," Biochemical character,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009718 - anthocyanin biosynthetic process, GO:0008415 - acyltransferase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010332 - response to gamma radiation, GO:0016210 - naringenin-chalcone synthase activity, GO:0051553 - flavone biosynthetic process, GO:0051555 - flavonol biosynthetic process, GO:0009408 - response to heat, GO:0009814 - defense response, incompatible interaction, GO:0009411 - response to UV, GO:0002213 - defense response to insect, GO:0009813 - flavonoid biosynthetic process","TO:0000160 - UV light sensitivity, TO:0000707 - pericarp color, TO:0000259 - heat tolerance, TO:0000071 - anthocyanin content, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000290 - flavonoid content, TO:0000653 - seed development trait","PO:0020104 - leaf sheath , PO:0009006 - shoot system , PO:0009047 - stem , PO:0001170 - seed development stage ","Os11g0530600","LOC_Os11g32650.1",null,"Os11g0544600","Os10g0562700",1.1526028,0,null,"D3","d3, dwf3, D3/OsMAX2, Os_F0760, SOL1, OsORE9, ORE9, MAX2, OsRFPH2-10, RFPH2-10, OsD3","DWARF BUNKETSUWAITO TILLERING","bunketsuwaito tillering dwarf, dwarf-3, F-box/LRR-repeat MAX2 homolog, F-box and leucine-rich repeat MAX2 homolog, DWARF 3, DWARF-3, suppressor of lazy1, DWARF3, ORESARA 9, MAX2 ortholog",6," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042594 - response to starvation, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0009926 - auxin polar transport, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009755 - hormone-mediated signaling, GO:0009851 - auxin biosynthetic process, GO:0010016 - shoot morphogenesis, GO:0010223 - secondary shoot formation, GO:0009959 - negative gravitropism, GO:0009646 - response to absence of light, GO:0009416 - response to light stimulus, GO:0009934 - regulation of meristem structural organization, GO:0009610 - response to symbiotic fungus","TO:0000586 - seminal root length, TO:0000370 - leaf width, TO:0000460 - light intensity sensitivity, TO:0002672 - auxin content, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000011 - nitrogen sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0001013 - lateral root number, TO:0000152 - panicle number, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0002693 - gravity response trait, TO:0000544 - mesocotyl length, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0006036 - stem elongation, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os06g0154200","LOC_Os06g06050.1","Os08g0345800","Os08g0345800","Os06g0695500",3.074114,2.9345798,null,"PDIL1-1","OsPDIL1;1, PDIL1;1, PDIL 1-1, PDI, OsPDIL1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1;1, protein disulfide-isomerase, PDI-like protein 1-1, Protein Disulfide Isomerase Like 1-1",11," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006662 - glycerol ether metabolic process, GO:0009055 - electron carrier activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009651 - response to salt stress, GO:0045454 - cell redox homeostasis, GO:0009408 - response to heat, GO:0055122 - response to very low light intensity stimulus, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0034975 - protein folding in endoplasmic reticulum, GO:0009409 - response to cold, GO:0046689 - response to mercury ion, GO:0010229 - inflorescence development, GO:0003756 - protein disulfide isomerase activity, GO:0005788 - endoplasmic reticulum lumen","TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000382 - 1000-seed weight, TO:0000621 - inflorescence development trait, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0000598 - protein content, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000333 - sugar content","PO:0009047 - stem , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009005 - root , PO:0025034 - leaf , PO:0009010 - seed ","Os11g0199200","LOC_Os11g09280.2, LOC_Os11g09280.1",null,null,"Os02g0189100",0,-0.97741985]
[{"$nulls":6},"Os04g0408700","LOC_Os04g33440",0.9976403,"Os03g0852300","LOC_Os03g63530","NF-YC",-1.1165094,{"$nulls":10},"Os02g0635000","Os10g0413500","Os03g0183200","Os03g0183200",-3.8856087,-1.6938057,null,"Os01g0610800",5.676895,"Os03g0168200",-2.0114577,{"$nulls":17},"Os06g0623300",0,1.040073,{"$nulls":9},"ARF17","OsARF17","AUXIN RESPONSE FACTOR 17","auxin response factor-17, auxin response factor 17",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0009834 - secondary cell wall biogenesis, GO:0003677 - DNA binding, GO:0006350 - transcription, GO:0051607 - defense response to virus, GO:0009808 - lignin metabolic process, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway, GO:0030244 - cellulose biosynthetic process, GO:0009926 - auxin polar transport, GO:0009908 - flower development","TO:0000163 - auxin sensitivity, TO:0000074 - blast disease, TO:0000206 - leaf angle, TO:0000567 - tiller angle, TO:0000124 - flag leaf angle, TO:0000731 - lignin content, TO:0000020 - black streak dwarf virus resistance, TO:0002688 - leaf lamina joint bending, TO:0002693 - gravity response trait, TO:0000396 - grain yield","PO:0020039 - leaf lamina , PO:0020103 - flag leaf ","Os06g0677800","LOC_Os06g46410.2, LOC_Os06g46410.1",null,"Os01g0823500","Os04g0583500","Os02g0268600",4.0400224,0,null,"YPD1","OsYPD1","YELLOW AND PREMATURE DWARF 1","LRR-like1 protein, LRR-like1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0008219 - cell death, GO:0031969 - chloroplast membrane, GO:0010941 - regulation of cell death, GO:0009658 - chloroplast organization, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0009642 - response to light intensity, GO:0010150 - leaf senescence","TO:0000460 - light intensity sensitivity, TO:0000494 - pigment content, TO:0002715 - chloroplast development trait, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000547 - primary branch number, TO:0000605 - hydrogen peroxide content, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000298 - chlorophyll ratio, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os06g0237502","LOC_Os06g13050.1",null,"Os12g0178633","Os03g0200500",-1.3408308,0,null,"ESP3","esp3(rsp3), rsp3, esp3","ENDOSPERM STORAGE PROTEIN 3","endosperm storage protein3, endosperm storage protein 3, endosperm storage protein-3",11," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009089 - endosperm ",{"$nulls":3},"Os07g0681500","Os03g0737701",1.1062198,0,null,"ACS3","ACC3*, ACC3, OsACS3, OS-ACS3, OsACC3","ACC SYNTHASE 3","ACC synthase 3, ACC synthase-3, 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 3, 1-aminocyclopropane-1-carboxylic acid synthase 3",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0009693 - ethylene biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium, GO:0009058 - biosynthetic process, GO:0030170 - pyridoxal phosphate binding, GO:0003824 - catalytic activity","TO:0000175 - bacterial blight disease resistance","PO:0009005 - root ","Os05g0196600","LOC_Os05g10780.1","Os03g0169800","Os03g0169800","Os05g0247100",0,2.9267607,null,"NRFG2","PFL, OsNRFG2","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 2","Protodermal Factor Like, neo-tetraploid rice fertility related gene 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000040 - panicle length, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait",null,"Os06g0553200","LOC_Os06g35970.1, LOC_Os06g35970.2",null,null,"Os06g0474200",0,-0.9868986]
[{"$nulls":6},"Os04g0604900","LOC_Os04g51520",1.0033355,"Os06g0667100","LOC_Os06g45640","NF-YC",-1.2620894,{"$nulls":10},"Os03g0175600","Os11g0210300","Os02g0657000","Os02g0657000",3.3227575,4.613399,null,"Os05g0111300",5.6575284,"Os01g0117200",-2.0088966,{"$nulls":17},"Os10g0467800",7.1616282,6.027947,{"$nulls":9},"ASP1","OsLIS-L1, OsWD40-155, ASP1, TPR2, OsTPR2, OsREL2, REL2, OsTPL3, TPL3, OsTPL2, TPL2, ASP-LSL","ABERRANT SPIKELET AND PANICLE 1","Lissencephaly type-1-like 1, ABERRANT SPIKELET AND PANICLE1, TOPLESS-RELATED PROTEIN 2, TOPLESS 3, aberrant spikelet-long sterile lemma, ROMOSA ENHANCER LOCI2",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0010073 - meristem maintenance, GO:0003714 - transcription corepressor activity, GO:0010229 - inflorescence development, GO:0019827 - stem cell maintenance, GO:0009734 - auxin mediated signaling pathway, GO:0010072 - primary shoot apical meristem specification, GO:0005634 - nucleus","TO:0002660 - cytokinin content, TO:0002672 - auxin content, TO:0000040 - panicle length, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0000145 - internode length, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000240 - sterile lemma length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000050 - inflorescence branching, TO:0000152 - panicle number, TO:0002768 - spikelet length, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0002727 - sterile lemma width, TO:0020033 - glume length, TO:0020034 - glume width, TO:0000371 - yield trait, TO:0000621 - inflorescence development trait, TO:0000650 - lemma length, TO:0002675 - gibberellic acid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os08g0162100","LOC_Os08g06480.1","LOC_Os09g23200.1","Os08g0174500","Os04g0520700","Os05g0518800",4.01957,0,null,"DNL4","DNL-4, OsDNL-4, OsDNL4","DWARF AND NARROW LEAF 4","dwarf and narrow leaf 4",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape","GO:0016301 - kinase activity","TO:0000040 - panicle length, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000370 - leaf width",null,"Os01g0105900","LOC_Os01g01620.1",null,"Os01g0670800","Os02g0661500",-1.3419166,0,null,"LK2","Lk2(t) (Lknb), Lknb, Lk2","NAGAYAMA 77402B LONG GRAIN 2","Nagayama 77402b long grain2, 'Nagayama 77402b (N182)' long grain, Long kernel-2",11," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000146 - seed length","PO:0009010 - seed ",{"$nulls":3},"Os01g0922800","Os01g0927600",1.104102,0,null,"EM","Em*, EMP1, Emp1, EM, Em, OsEm, Osem, OsLEA21, OsEm1, Em1","ABA REGULATED GENE","ABA regulated gene, ABA-regulated gene, Embryonic abundant protein 1, Em protein, Early methionine labelled polypeptide, Abscisic acid induced protein, Embryogenic protein, late embryogenesis abundant protein 21",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009688 - abscisic acid biosynthetic process, GO:0047484 - regulation of response to osmotic stress, GO:0048700 - acquisition of desiccation tolerance, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009415 - response to water","TO:0000237 - water stress trait, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os05g0349800","LOC_Os05g28210.1","Os11g0605500","Os11g0605500","Os03g0175800",0,2.9263191,null,"GLT1","OsGLT1, OsNADH-GOGAT1, NADH-GOGAT1, OsNADH-GOGAT, GOGAT, NADH-GOGAT, OsGOGAT1, GOGAT1, OsGLU1","NADH-DEPENDENT GLUTAMATE SYNTHASE 1","NADH-glutamate synthase 1, glutamate synthase, NADH-glutamate synthase, NADH-Glu synthase, Glutamate synthase (NADPH) small chain, NADH-dependent glutamate synthase1, NADH-dependent glutamate synthase 1",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005506 - iron ion binding, GO:0009536 - plastid, GO:0051538 - 3 iron, 4 sulfur cluster binding, GO:0019676 - ammonia assimilation cycle, GO:0019740 - nitrogen utilization, GO:0042594 - response to starvation, GO:0009507 - chloroplast, GO:0048589 - developmental growth, GO:0060359 - response to ammonium ion, GO:0006537 - glutamate biosynthetic process, GO:0010157 - response to chlorate, GO:0050660 - FAD binding, GO:0016040 - glutamate synthase (NADH) activity, GO:0010181 - FMN binding, GO:0010167 - response to nitrate","TO:0000152 - panicle number, TO:0000598 - protein content, TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000371 - yield trait, TO:0000329 - tillering ability","PO:0006343 - axillary shoot system , PO:0004709 - axillary bud , PO:0009005 - root ","Os01g0681900","LOC_Os01g48960.1",null,null,"Os06g0275000",-1.3490849,-1.0695515]
[{"$nulls":6},"Os03g0638200","LOC_Os03g43720",1.0119572,"Os04g0408700","LOC_Os04g33440","S1Fa-like",0.9976403,{"$nulls":10},"Os11g0438000","Os03g0852300","Os09g0518900","Os09g0518900",2.101123,2.819342,null,"Os06g0131700",5.644571,"Os08g0190100",-2.0081575,{"$nulls":17},"Os06g0289900",0,7.8760147,{"$nulls":9},"SL","OsSL, sl (spl1), sl*, sl, spl1, CYP71P1, Os CYP71P1, T5H, OsT5H, CYP71A1, OsCYP71A1, OsLLM1, LLM1, LLM1/OsSL, ELL1, OsELL1, ELL1/SL, OsT5H1","SEKIGUCHI LESION","Sekiguchi lesion, Cytochrome P450 71P1, tryptamine 5-hydroxylase, large lesion mimic 1, early lesion leaf 1",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005783 - endoplasmic reticulum, GO:0009646 - response to absence of light, GO:0009414 - response to water deprivation, GO:0009658 - chloroplast organization, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0070265 - necrotic cell death, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0052545 - callose localization, GO:0009266 - response to temperature stimulus, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009408 - response to heat, GO:0012501 - programmed cell death, GO:0006913 - nucleocytoplasmic transport, GO:0009651 - response to salt stress, GO:0002213 - defense response to insect, GO:0042427 - serotonin biosynthetic process, GO:0009416 - response to light stimulus","TO:0000482 - chemical stress sensitivity, TO:0000454 - stem borer resistance, TO:0000495 - chlorophyll content, TO:0000455 - seed set percent, TO:0002757 - flag leaf length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000293 - chlorophyll-a content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000261 - insect damage resistance, TO:0000401 - plant growth hormone sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000075 - light sensitivity, TO:0000259 - heat tolerance, TO:0000063 - mimic response, TO:0002715 - chloroplast development trait, TO:0000295 - chlorophyll-b content, TO:0000276 - drought tolerance, TO:0000432 - temperature response trait, TO:0000468 - leaf blast disease resistance, TO:0000496 - carotenoid content, TO:0000424 - brown planthopper resistance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0009005 - root , PO:0007010 - whole plant fruit ripening stage , PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009025 - vascular leaf ","Os12g0268000","LOC_Os12g16720.1","LOC_Os04g47870.2, LOC_Os04g47870.1","Os02g0278700","Os04g0574700","Os02g0285300",4.0003457,0,null,"RLR1","OsRLR1","RPM1-LIKE RESISTANCE GENE 1","RPM1-like resistance gene 1",10," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0009626 - plant-type hypersensitive response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0031349 - positive regulation of defense response, GO:0005524 - ATP binding","TO:0000040 - panicle length, TO:0000112 - disease resistance, TO:0002759 - grain number, TO:0000357 - growth and development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os10g0163040","LOC_Os10g07978.2, LOC_Os10g07978.1",null,"Os02g0170000","Os10g0403000",-1.3444344,0,null,"MIK","mi k, mik, mi2","MICROSATELLITE-TARGETING TRANSPOSABLE ELEMENT","'Kitaake mutant' minute grain, minute grain-2",11," Seed - Morphological traits - Grain shape","GO:0003700 - transcription factor activity, GO:0032196 - transposition","TO:0000436 - spikelet sterility, TO:0000181 - seed weight, TO:0000391 - seed size, TO:0000089 - panicle type, TO:0000146 - seed length, TO:0000137 - days to heading","PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009049 - inflorescence ",{"$nulls":3},"Os03g0259300","Os02g0777800",1.0892912,0,null,"EUI1","eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, OsEUI","ELONGATED UPPERMOST INTERNODE 1","elongated uppermost internode, elongated uppermost internode-1, Elongation of Upper most Internode, ELONGATED UPPERMOST INTERNODE1, dwarf Eui1",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0009826 - unidimensional cell growth, GO:0009651 - response to salt stress, GO:0022900 - electron transport chain, GO:0007275 - multicellular organismal development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0004497 - monooxygenase activity, GO:0009685 - gibberellin metabolic process, GO:0010106 - cellular response to iron ion starvation, GO:0010229 - inflorescence development, GO:0045487 - gibberellin catabolic process, GO:0032940 - secretion by cell","TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0002675 - gibberellic acid content, TO:0000576 - stem length, TO:0000224 - iron sensitivity, TO:0000207 - plant height, TO:0001002 - inflorescence exsertion, TO:0000040 - panicle length, TO:0006001 - salt tolerance","PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0007089 - stem elongation stage , PO:0007112 - 1 main shoot growth stage , PO:0001083 - inflorescence development stage ","Os05g0482400","LOC_Os05g40384.1","Os04g0685900","Os04g0685900","Os08g0556900",0,2.91878,null,"SIZ1","OsSIZ1, OsSIZ1.1, OsSIZ1.2, OsSIZ1.3, DLN131, OsDLN131, OsPHD23, PHD23","_","SAP and MIZ 1, SUMO ligase Siz1, Siz/PIAS-type SUMO ligase 1, SIZ/PIAS-type SUMO E3 ligase 1, E3 SUMO-protein ligase SIZ1, DLN repressor 131, DLN motif protein 131, Plant homeo-domain finger protein 23, PHD finger protein 23",5," Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009901 - anther dehiscence, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0003676 - nucleic acid binding, GO:0016874 - ligase activity","TO:0000342 - panicle axis angle, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000146 - seed length, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0125000","LOC_Os05g03430.3, LOC_Os05g03430.2, LOC_Os05g03430.1",null,null,"Os03g0810100",0,-1.1375446]
[{"$nulls":6},"Os04g0470600","LOC_Os04g39470",1.0198911,"Os02g0174100","LOC_Os02g07780","SBP",1.9949021,{"$nulls":10},"Os05g0515600","Os01g0911200","Os05g0389000","Os05g0389000",3.2207673,2.0078347,null,"Os02g0639600",5.64308,"Os04g0587300",-2.0073464,{"$nulls":17},"Os11g0113700",3.8011553,2.5787117,{"$nulls":9},"TW","tw(t)*(tl), tl, tw","TWISTED LEAF","twisted leaf",null," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000085 - leaf rolling",{"$nulls":3},"LOC_Os01g68120.1","Os03g0170900","Os02g0579600","Os01g0127200",3.924364,0,null,"_",null,"_",null,1," Biochemical character,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004190 - aspartic-type endopeptidase activity","TO:0000456 - spikelet number","PO:0009049 - inflorescence , PO:0009030 - carpel ","Os01g0140100","LOC_Os01g04710.1",null,"Os01g0892800","Os01g0720800",-1.3605975,0,null,"NAL2","nal2, nal3, cul2, OsWOX3A, WOX3A, Os NS, NS, OsNS, OsWOX3, OsNS1/OsNS2, OsPRS","NARROW LEAF 2","narrow leaf2, narrow leaf 2, narrow leaf-2, curl leaf-2, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3A",11," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009740 - gibberellic acid mediated signaling, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009734 - auxin mediated signaling pathway, GO:0048364 - root development, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis","TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height, TO:0001013 - lateral root number, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000166 - gibberellic acid sensitivity, TO:0000402 - grain width, TO:0000656 - root development trait, TO:0000370 - leaf width, TO:0000492 - leaf shape, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0009025 - vascular leaf , PO:0007520 - root development stage ","Os11g0102100","LOC_Os11g01130.1, LOC_Os11g01130.2",null,"Os03g0241300","Os05g0530500",1.0487126,0,null,"GLH6","Glh6","GREEN LEAFHOPPER RESISTANCE 6","Green leafhopper resistance6, Green leafhopper resistance 6, Green leafhopper resistance-6",5," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0755500","Os01g0755500","Os06g0729000",2.196682,2.9180725,null,"SIZ2","OsSIZ2","_","SAP and MIZ 2, SIZ/PIAS-type SUMO E3 ligase 2",3," Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009901 - anther dehiscence, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0019789 - SUMO ligase activity, GO:0051301 - cell division, GO:0016049 - cell growth, GO:0048653 - anther development, GO:0048316 - seed development, GO:0009910 - negative regulation of flower development, GO:0016925 - protein sumoylation, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0040008 - regulation of growth, GO:0010337 - regulation of salicylic acid metabolic process, GO:0050826 - response to freezing, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding","TO:0000146 - seed length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0001004 - anther development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os03g0719100","LOC_Os03g50980.1",null,null,"Os02g0134200",0,-1.2308279]
[{"$nulls":6},"Os01g0715400","LOC_Os01g51754",1.0224143,"Os06g0659100","LOC_Os06g44860","SBP",-1.209332,{"$nulls":10},"Os03g0775000","Os10g0527800","Os02g0558700","Os02g0558700",-1.5780007,-1.4129696,null,"Os10g0554800",5.6397414,"Os12g0194900",-2.0046668,{"$nulls":17},"Os05g0134400",3.1733818,3.6408613,{"$nulls":9},"DL","DL, dl(lop), lop, dl, dl1","DROOPING LEAF","drooping leaf, drooping leaf-1, DL protein, Protein DROOPING LEAF, Protein CRABS CLAW homolog, Protein CRC homolog",3," Vegetative organ - Leaf,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048440 - carpel development, GO:0030154 - cell differentiation, GO:0008270 - zinc ion binding, GO:0048366 - leaf development, GO:0010022 - meristem determinacy, GO:0010073 - meristem maintenance, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0006017 - meristem identity, TO:0000206 - leaf angle, TO:0000499 - flower anatomy and morphology trait, TO:0000124 - flag leaf angle, TO:0000472 - vascular bundle number, TO:0002718 - awn anatomy and morphology trait, TO:0000655 - leaf development trait","PO:0000019 - gynoecium primordium , PO:0000229 - flower meristem , PO:0009082 - spikelet floret , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009037 - lemma , PO:0009009 - plant embryo , PO:0009025 - vascular leaf ","Os03g0215200","LOC_Os03g11600.2, LOC_Os03g11600.1","LOC_Os03g43930.2, LOC_Os03g43930.1","Os08g0504700","Os03g0666100","Os01g0822900",3.8798516,0,null,"LARGE2","OsLARGE2, OsUPL2, UPL2","UBIQUITIN PROTEIN LIGASE 2","Ubiquitin Protein Ligase 2",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0005737 - cytoplasm, GO:0000209 - protein polyubiquitination, GO:0016567 - protein ubiquitination, GO:0010073 - meristem maintenance, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0045732 - positive regulation of protein catabolic process","TO:0000339 - stem thickness, TO:0002759 - grain number, TO:0006032 - panicle size, TO:0000370 - leaf width","PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0428600","LOC_Os12g24080.1",null,"Os09g0533600","Os07g0668900",-1.374946,0,null,"ESP2","esp2(rsp2), rsp2, esp2, PDIL1-1","ENDOSPERM STORAGE PROTEIN 2","endosperm storage protein2, endosperm storage protein 2, endosperm storage protein-2, endosperm storage protein mutant2, protein disulfide isomerase-like 1-1",11," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000109 - endosperm storage protein-2 content, TO:0000490 - protein composition related trait","PO:0009089 - endosperm ",{"$nulls":3},"Os04g0583500","Os08g0445700",1.030279,0,null,"GLUP4","glup4(esp8), esp8, glup4, OsRab5B2, Rab5a, OsRab5a, GPA1/Rab5a, GPA, GLUP4/Rab5, GLUP4/Rab5a, GPA1, OsGPA1","GLUTELIN PRECURSOR 4","glutelin precursor4, glutelin precursor 4, glutelin precursor-4, small GTP-binding protein OsRab5B2, small GTP-binding protein OsRab5a, glutelin precursor mutant4, glutelin precursor accumulation 1",12," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0006970 - response to osmotic stress, GO:0045735 - nutrient reservoir activity, GO:0016197 - endosome transport, GO:0051028 - mRNA transport, GO:0007264 - small GTPase mediated signal transduction, GO:0005768 - endosome, GO:0016482 - cytoplasmic transport, GO:0005525 - GTP binding, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0015031 - protein transport","TO:0000490 - protein composition related trait, TO:0006001 - salt tolerance, TO:0000109 - endosperm storage protein-2 content, TO:0000095 - osmotic response sensitivity","PO:0009010 - seed ","Os12g0631100","LOC_Os12g43550.2, LOC_Os12g43550.1","Os08g0462700","Os08g0462700","Os04g0580400",2.524665,2.8872042,null,"SODCC2","Cu/Zn-SOD, Cu/Zn- SOD, OsSODB, OsSOD3, SodCc2, Os SodCc2, sodB, OsSodB, RSODB, OssodCc1, OsCSD1.1, CSD1.1, OsCDS1, OsSOD3-CU/Zn, SOD3-CU/Zn, CuZnSOD2, Cu/ZnSOD2, OsCu/ZnSOD2, OsCSD1, CSD1, CuZnSOD1","CYTOSOLIC SUPEROXIDASE DISMUTASE 2","Cu/Zn-superoxide dismutase, superoxide dismutase B, copper/zinc-superoxide dismutase, \\Cu, Zn superoxide dismutase\\\", cytosolic copper/zinc-superoxide dismutase 2, \\\"Superoxide dismutase (Cu-Zn) 4, cytosolic\\\", Cu-dependent SOD 1.1\"",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0019430 - removal of superoxide radicals, GO:0006979 - response to oxidative stress, GO:0012501 - programmed cell death, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0005507 - copper ion binding, GO:0004784 - superoxide dismutase activity, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0010039 - response to iron ion, GO:0009845 - seed germination","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0002657 - oxidative stress, TO:0000040 - panicle length, TO:0000447 - filled grain number","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage , PO:0005360 - aleurone layer ","Os07g0665200","LOC_Os07g46990.2, LOC_Os07g46990.1",null,null,"Os01g0685400",1.7438254,-1.3034965]
[{"$nulls":6},"Os01g0670800","LOC_Os01g48060",1.0322542,"Os06g0703500","LOC_Os06g49010","SBP",2.0117123,{"$nulls":10},"Os01g0224700","Os09g0511700","Os01g0753500","Os01g0753500",2.7680786,1.6797137,null,"Os10g0190100",5.630752,"Os10g0362700",-2.0028982,{"$nulls":17},"Os07g0424400",3.7829869,3.1942482,{"$nulls":9},"FIB","fib, OsFIB, OsTAR2, TAR2, TSG1, OsTSG1, OsTAA1, TAA1","FISH BONE","fish bone, Trp aminotransferase 2, Tillering and small grain 1, tryptophan aminotransferase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0016846 - carbon-sulfur lyase activity, GO:0009408 - response to heat, GO:0060284 - regulation of cell development, GO:0048830 - adventitious root development, GO:0048364 - root development, GO:0009684 - indoleacetic acid biosynthetic process, GO:0048467 - gynoecium development, GO:0030170 - pyridoxal phosphate binding, GO:0009958 - positive gravitropism, GO:0009723 - response to ethylene stimulus, GO:0005783 - endoplasmic reticulum, GO:0080022 - primary root development, GO:0048449 - floral organ formation, GO:0009630 - gravitropism, GO:0010087 - phloem or xylem histogenesis, GO:0009926 - auxin polar transport, GO:0009414 - response to water deprivation, GO:0009851 - auxin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0048825 - cotyledon development, GO:0016021 - integral to membrane, GO:0051302 - regulation of cell division, GO:0046685 - response to arsenic, GO:0001558 - regulation of cell growth, GO:0010588 - cotyledon vascular tissue pattern formation, GO:0010078 - maintenance of root meristem identity","TO:0001006 - adventitious root number, TO:0000084 - root number, TO:0002637 - leaf size, TO:0000276 - drought tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000578 - root fresh weight, TO:0000031 - silicon sensitivity, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000163 - auxin sensitivity, TO:0002681 - leaf curling, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000257 - root branching, TO:0000576 - stem length, TO:0002672 - auxin content, TO:0000397 - grain size, TO:0000492 - leaf shape, TO:0000259 - heat tolerance, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000206 - leaf angle, TO:0000436 - spikelet sterility","PO:0020103 - flag leaf , PO:0005001 - basal axillary shoot system , PO:0009005 - root , PO:0009047 - stem , PO:0009038 - palea , PO:0009037 - lemma , PO:0009025 - vascular leaf , PO:0009006 - shoot system , PO:0007520 - root development stage , PO:0025424 - vascular tissue development stage , PO:0009051 - spikelet ","Os01g0169800 ","LOC_Os01g07500.1","LOC_Os11g06720.1","Os01g0174000","Os01g0834400","Os05g0554400",3.8717346,0,null,"ANK1 ","OsANK1","ANKYRIN 1","Ankyrin 1, Ankyrin domain containing protein 1",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000052 - primary branching of inflorescence, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000547 - primary branch number","PO:0006327 - spikelet meristem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0025073 - branch ","Os02g0492000","LOC_Os02g29040.2, LOC_Os02g29040.1",null,"Os04g0620600","Os05g0498900",-1.3933231,0,null,"SH1","sh1","SHATTERING 1","shattering1, shattering 1, shattering-1",11," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering","PO:0009010 - seed ",{"$nulls":3},"Os04g0520700","Os03g0700400",0.9930461,0,null,"GRH1","Grh1","GREEN RICE LEAFHOPPER RESISTANCE 1","Green rice leafhopper resistance1, Green rice leafhopper resistance 1, Green rice leafhopper resistance-1",5," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os06g0597000","Os06g0597000","Os07g0663600",0,2.8837898,null,"TIFY11D","OsTIFY11d, OsJAZ1, JAZ1, OsJAZ 12, OsJAZ12, JAZ12","TIFY GENE 11D","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0042594 - response to starvation, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000011 - nitrogen sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000276 - drought tolerance",null,"Os10g0392400","LOC_Os10g25290.1",null,null,"Os03g0643300",-2.851637,-1.3771795]
[{"$nulls":6},"Os09g0546900","LOC_Os09g37480",1.039621,"Os11g0496600","LOC_Os11g30370","SBP",1.261798,{"$nulls":10},"Os04g0269600","Os02g0134300","Os01g0670800","Os01g0670800",1.4240936,1.0322542,null,"Os03g0788600",5.59934,"Os11g0128600",-1.9986981,{"$nulls":17},"Os03g0712800",2.4170392,1.5344108,{"$nulls":9},"PLA2","pla2, pla2(pla2-1, pla2-2), plt2, LHD2, OsLHD2","PLASTOCHRON 2","plastochron2, PLASTOCHRON2, LEAFY HEAD2, Protein terminal ear1 homolog, Protein PLASTOCHRON2, LEAFY HEAD2, leafy-head2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Heterochrony","GO:0000166 - nucleotide binding, GO:0003723 - RNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0003676 - nucleic acid binding, GO:0048367 - shoot development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0009740 - gibberellic acid mediated signaling, GO:0051781 - positive regulation of cell division, GO:0009739 - response to gibberellin stimulus, GO:0007275 - multicellular organismal development","TO:0000735 - plastochron, TO:0000492 - leaf shape, TO:0000654 - shoot development trait, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000369 - vegetative growth time, TO:0000346 - tiller number, TO:0006021 - vegetative to reproductive phase transition trait, TO:0002638 - shoot meristem development, TO:0000135 - leaf length, TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000730 - mitotic cell cycle trait, TO:0000361 - stem anatomy and morphology trait","PO:0025527 - shoot system development stage , PO:0020122 - inflorescence axis , PO:0000037 - shoot apex , PO:0009025 - vascular leaf , PO:0009034 - flower bract , PO:0009047 - stem , PO:0020031 - radicle , PO:0020142 - stem internode , PO:0020148 - shoot apical meristem ","Os01g0907900","LOC_Os01g68000.1","LOC_Os06g03710.1","Os03g0637800","Os12g0479400","Os02g0324400",3.8157308,0,null,"ANK2","OsANK2, OsTPR047, TPR047, OsTPR47, TPR47","ANKYRIN 2","Ankyrin 2, Ankyrin domain containing protein 2, Tetratricopeptide repeat domain containing protein 47",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000621 - inflorescence development trait, TO:0000557 - secondary branch number, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0006327 - spikelet meristem , PO:0001083 - inflorescence development stage , PO:0025073 - branch ","Os02g0494400","LOC_Os02g29210.4, LOC_Os02g29210.3, LOC_Os02g29210.2, LOC_Os02g29210.1",null,"Os06g0661400","Os06g0270900",-1.4823111,0,null,"DU4","du4","DULL ENDOSPERM 4","dull endosperm4, dull endosperm 4, dull endosperm-4",12," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009089 - endosperm ",{"$nulls":3},"Os09g0443500","Os02g0768600",0.9773137,0,null,"OC2","Oc2*, Oc2, OC-II, OC-III, OCII, OsCYS2","ORYZACYSTATIN 2","Oryzacystatin2, Cysteine proteinase inhibitor 2, Oryzacystatin-2, Oryzacystatin II, Oryzacystatin-II, Oryzacystatin-III",5," Biochemical character,  Tolerance and resistance - Insect resistance","GO:0030414 - peptidase inhibitor activity, GO:0004869 - cysteine-type endopeptidase inhibitor activity, GO:0006952 - defense response, GO:0009536 - plastid","TO:0000054 - animal damage resistance",null,"Os05g0494200","LOC_Os05g41460.1, LOC_Os05g41460.2","Os11g0131900","Os11g0131900","Os05g0406100",0,2.8334713,null,"TIFY11C","OsJAZ2, JAZ2, OsJAZ 11, OsJAZ11, Os-JAZ11, JAZ11, OsTIFY11c. OsJAZ1, JAZ1","TIFY GENE 11C","Jasmonate ZIM-domain protein 2, Jasmonate ZIM-domain protein 11",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0016036 - cellular response to phosphate starvation, GO:0055062 - phosphate ion homeostasis, GO:0010966 - regulation of phosphate transport, GO:0031347 - regulation of defense response, GO:0042594 - response to starvation, GO:0080022 - primary root development, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000148 - viral disease resistance, TO:0000207 - plant height, TO:0000180 - spikelet fertility",null,"Os03g0180900","LOC_Os03g08320.1",null,null,"Os09g0133600",-1.8123945,-1.5827652]
[{"$nulls":6},"Os03g0823400","LOC_Os03g60840",1.0985451,"Os03g0123500","LOC_Os03g03164","TALE",3.811927,{"$nulls":10},"Os04g0372700","Os01g0749300","Os04g0442300","Os04g0442300",6.0132713,1.9674207,null,"Os01g0649900",5.566296,"Os11g0649700",-1.9975138,{"$nulls":17},"Os05g0204600",0,1.7392745,{"$nulls":9},"CPM1","cpm1(t)","LONG COLEOPTILE 1","long coleoptile1(t)",null," Vegetative organ - Leaf","GO:0009640 - photomorphogenesis",{"$nulls":4},"LOC_Os06g24730.3, LOC_Os06g24730.2, LOC_Os06g24730.1","Os02g0134300","Os08g0323700","Os08g0562500",3.7348995,0,null,"TPR45","OsTPR045, TPR045, OsTPR45","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 45","Tetratricopeptide repeat domain containing protein 45",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000621 - inflorescence development trait","PO:0025073 - branch , PO:0001083 - inflorescence development stage , PO:0006327 - spikelet meristem , PO:0009049 - inflorescence ","Os02g0493300","LOC_Os02g29160.1",null,"Os03g0640100","Os08g0120000",-1.5058984,0,null,"PRO1","Pro1*, Pro1","PROLAMIN 1","Prolamin1, Prolamin 1, Prolamin-1",12," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":3},"Os04g0508300","Os08g0557000",0.9733054,0,null,"PI10","Pi10(t)*, Pi10, Pi-10t, Pi-10, Pi-10(t)","PYRICULARIA ORYZAE RESISTANCE 10","Pyricularia oryzae resistance 10, Magnaporthe grisea resistance 10, Blast resistance 10",5," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000483 - germinability at low temperature","PO:0009025 - vascular leaf ",null,null,"Os08g0345700","Os08g0345700","Os01g0229400",0,2.7913215,null,"TIFY11A","OsJAZ3, JAZ3, OsJAZ 9, OsJAZ9, Os-JAZ9, JAZ9, OsTIFY11a, OsJAZ6, JAZ6","TIFY GENE 11A","Jasmonate ZIM-domain protein 3, Jasmonate ZIM-domain protein 9",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000397 - grain size",null,"Os03g0180800","LOC_Os03g08310.1",null,null,"Os03g0146400",-2.0158217,-1.6110601]
[{"$nulls":6},"Os01g0915600","LOC_Os01g68700",1.1191101,"Os03g0124000","LOC_Os03g03260","TALE",-1.0684227,{"$nulls":10},"Os10g0413500","Os08g0364900","Os09g0510500","Os09g0510500",4.8006577,3.5891144,null,"Os10g0555700",5.5647798,"Os06g0293500",-1.9937325,{"$nulls":17},"Os05g0247100",0,2.9267607,{"$nulls":9},"ADL1","adl1","ADAXIALIZED LEAF 1","adaxialized leaf-1, ADAXIALIZED LEAF1, shootless 3, Dek1-calpain-like protein",2," Biochemical character,  Vegetative organ - Leaf","GO:0001708 - cell fate specification, GO:0009955 - adaxial/abaxial pattern formation, GO:0005622 - intracellular, GO:0006508 - proteolysis, GO:0007275 - multicellular organismal development, GO:0005886 - plasma membrane, GO:0004198 - calcium-dependent cysteine-type endopeptidase activity","TO:0000492 - leaf shape, TO:0000085 - leaf rolling, TO:0000576 - stem length","PO:0009025 - vascular leaf , PO:0009047 - stem ","Os02g0709400","LOC_Os02g47970.1","LOC_Os03g45194.1","Os05g0139100","Os01g0765000","Os03g0633800",3.7268476,0,null,"TPR46","OsTPR046, TPR046, OsTPR46","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 46","Tetratricopeptide repeat domain containing protein 46",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0048281 - inflorescence morphogenesis, GO:0010229 - inflorescence development","TO:0000142 - secondary branching of inflorescence, TO:0000371 - yield trait, TO:0000557 - secondary branch number, TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os02g0494000","LOC_Os02g29190.1",null,"Os03g0172000","Os08g0112700",-1.5087461,0,null,"NAL3","nal3(nal2), nal2, nal3, cul3, OsWOX3A, WOX3A, WOX3, OsWOX3, OsNS, OsNS1/OsNS2, OsPRS","NARROW LEAF 3","narrow leaf3, narrow leaf 3, narrow leaf-3, curl leaf-3, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3, WUSCHEL-related homeobox 3A",12," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0048366 - leaf development, GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000276 - drought tolerance, TO:0000370 - leaf width, TO:0000402 - grain width, TO:0000346 - tiller number, TO:0000492 - leaf shape, TO:0000149 - seed width, TO:0001013 - lateral root number, TO:0002675 - gibberellic acid content, TO:0000655 - leaf development trait, TO:0000166 - gibberellic acid sensitivity","PO:0009025 - vascular leaf , PO:0001050 - leaf development stage ","Os12g0101600","LOC_Os12g01120.1",null,"Os01g0179400","Os01g0813900",0.9607911,0,null,"POX1","Pox1(Px,Pe), PRX74, Px, Pe, Pox1, prx74","PEROXIDASE 1","Peroxidase1, Peroxidase 1 precursor, Peroxidase 1, Peroxidase-1, class III peroxidase 74",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0005576 - extracellular region, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0055114 - oxidation reduction, GO:0004601 - peroxidase activity, GO:0009409 - response to cold, GO:0042744 - hydrogen peroxide catabolic process, GO:0005509 - calcium ion binding","TO:0000303 - cold tolerance",null,"Os05g0499300","LOC_Os05g41990.1","Os07g0673900","Os07g0673900","Os01g0618900",3.0894601,2.7548828,null,"TIFY11B","OsJAZ4, JAZ4, OsJAZ 10, OsJAZ10, JAZ10, OsTIFY11b","TIFY GENE 11B","Jasmonate ZIM-domain protein 4, Jasmonate ZIM-domain protein 10",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009409 - response to cold, GO:0005634 - nucleus","TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000180 - spikelet fertility, TO:0000303 - cold tolerance, TO:0002757 - flag leaf length, TO:0000172 - jasmonic acid sensitivity",null,"Os03g0181100","LOC_Os03g08330.1",null,null,"Os08g0174500",0,-1.6632209]
[{"$nulls":6},"Os01g0701900","LOC_Os01g50616",1.1218387,"Os05g0455200","LOC_Os05g38120","TALE",1.769432,{"$nulls":10},"Os01g0100400","Os07g0568600","Os10g0544200","Os10g0544200",5.418375,3.7744904,null,"Os03g0765500",5.549744,"Os10g0462900",-1.9924326,{"$nulls":17},"Os10g0539600",4.3911285,3.3820488,{"$nulls":9},"qLA-1","qLA-1","leaf angle (QTL)-1","leaf angle (QTL)-1",1," Vegetative organ - Leaf",{"$nulls":6},"Os02g0562700","Os02g0121300","Os03g0346200",3.567796,0,null,"TPR42","OsTPR042, TPR042, OsTPR42","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 42","Tetratricopeptide repeat domain containing protein 42",2," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os02g0492900","LOC_Os02g29130.2, LOC_Os02g29130.1",null,"Os01g0114300","Os03g0839900",-1.5584296,0,null,"SHL1","shl1, sh1","SHOOTLESS 1","shootless 1, shootless-1",12," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0020144 - apical meristem ",{"$nulls":3},"Os01g0765000","Os03g0586900",-0.9504668,0,null,"XA5","xa5, xa-5, Xa5, TFIIAy, OsTFIIAgamma5, TFIIAgamma5, OsTFIIAgamma5/Xa5","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 5","Xanthomonas oryzae pv. oryzae resistance 5, Xanthomonas campestris pv. oryzae resistance-5, Xanthomonas oryzae pv. oryzae resistance-5, Transcription initiation factor IIA subunit 2, General transcription factor IIA subunit 2, Transcription initiation factor IIA gamma chain, TFIIA-gamma, gamma subunit of transcription factor IIA, basal transcription factor IIA gamma subunit  5",5," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0003702 - RNA polymerase II transcription factor activity, GO:0003743 - translation initiation factor activity, GO:0009751 - response to salicylic acid stimulus, GO:0042742 - defense response to bacterium, GO:0005672 - transcription factor TFIIA complex, GO:0006412 - translation, GO:0045449 - regulation of transcription, GO:0006367 - transcription initiation from RNA polymerase II promoter","TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance","PO:0009025 - vascular leaf ","Os05g0107700","LOC_Os05g01710.1, LOC_Os05g01710.2, LOC_Os05g01710.3","Os08g0490600","Os08g0490600","Os07g0467200",0,2.7230635,null,"TIFY10A","OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A","TIFY GENE 10A","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0031347 - regulation of defense response, GO:0005634 - nucleus, GO:0051607 - defense response to virus, GO:0009611 - response to wounding","TO:0002736 - flower number, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0002759 - grain number",null,"Os03g0402800","LOC_Os03g28940.2, LOC_Os03g28940.1",null,null,"Os01g0675800",-2.1810002,-1.7036854]
[{"$nulls":6},"Os01g0859400","LOC_Os01g64010",{"$f":"VLOOKUP(G131,AG:AH, 2,FALSE)","v":1.130426},"Os02g0747400","LOC_Os02g51280","TCP",3.0791883,{"$nulls":10},"Os06g0203200","Os02g0208900","Os08g0536300","Os08g0536300",2.1310964,1.903288,null,"Os08g0151300",5.5473714,"Os02g0317700",-1.9908844,{"$nulls":17},"Os06g0641800",0,1.4135418,{"$nulls":9},"qLA-3","qLA-3","leaf angle (QTL)-3","leaf angle (QTL)-3",3," Vegetative organ - Leaf",{"$nulls":5},"LOC_Os06g40050.2, LOC_Os06g40050.1","Os03g0301200","Os10g0498700","Os05g0386800",3.421819,0,null,"TPR43","OsTPR043, TPR043, OsTPR43","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 43","Tetratricopeptide repeat domain containing protein 43",2," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os02g0493050","LOC_Os02g29140.1",null,"Os09g0133600","Os04g0656100",-1.651204,0,null,"SHL2","shl2, SHL2, sh2, OsRDR6, RDR6","SHOOTLESS 2","shootless 2, shootless-2, Probable RNA-dependent RNA polymerase SHL2, Protein SHOOTLESS 2, SHOOTLESS2, RNA-dependent RNA polymerase 6, rod-like lemma",1," Vegetative organ - Shoot apical meristem(SAM),  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006306 - DNA methylation, GO:0042138 - meiotic DNA double-strand break formation, GO:0006950 - response to stress, GO:0009266 - response to temperature stimulus, GO:0003968 - RNA-directed RNA polymerase activity, GO:0009737 - response to abscisic acid stimulus, GO:0003723 - RNA binding, GO:0010492 - maintenance of shoot apical meristem identity, GO:0051607 - defense response to virus, GO:0031047 - gene silencing by RNA, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development, GO:0030422 - production of siRNA involved in RNA interference, GO:0016246 - RNA interference, GO:0005739 - mitochondrion","TO:0000485 - sterility related trait, TO:0002718 - awn anatomy and morphology trait, TO:0000615 - abscisic acid sensitivity, TO:0000274 - floret anatomy and morphology trait, TO:0000432 - temperature response trait, TO:0000064 - embryo related trait, TO:0000164 - stress trait, TO:0000148 - viral disease resistance","PO:0009009 - plant embryo , PO:0020144 - apical meristem ","Os01g0527600","LOC_Os01g34350.1",null,"Os10g0498700","Os03g0132800",-0.9512622,0,null,"_","OsPAL04, PAL04, PAL, OsPAL7, PAL7","PHENYLALANINE AMMONIA-LYASE","Phenylalanine ammonia lyase",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009620 - response to fungus, GO:0016841 - ammonia-lyase activity, GO:0016211 - ammonia ligase activity, GO:0009058 - biosynthetic process, GO:0009408 - response to heat, GO:0006559 - L-phenylalanine catabolic process, GO:0002213 - defense response to insect, GO:0005737 - cytoplasm","TO:0000432 - temperature response trait, TO:0000074 - blast disease, TO:0000424 - brown planthopper resistance",null,"Os05g0427400","LOC_Os05g35290.1","Os12g0468300","Os12g0468300","Os11g0116200",0,2.6963356,null,"TIFY10B","OsJAZ6, OsJAZ 7, OsJAZ7, OsTIFY10B, JAZ6, JAZ7","TIFY GENE 10B","Jasmonate ZIM-domain protein 6, Jasmonate ZIM-domain protein 7.",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus","TO:0000576 - stem length, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0002759 - grain number, TO:0002736 - flower number, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0615200","LOC_Os07g42370.3, LOC_Os07g42370.2, LOC_Os07g42370.1",null,null,"Os10g0562100",-2.144032,-1.7148021]
[{"$nulls":6},"Os02g0174000","LOC_Os02g07770",1.1381454,"Os01g0318400","LOC_Os01g21590","Trihelix",{"$f":"VLOOKUP(K132,H:I, 2,FALSE)","v":-1.3575705},{"$nulls":10},"Os04g0359100","Os04g0650800","Os08g0428400","Os08g0428400",2.029749,1.5630218,null,"Os04g0396800",5.545799,"Os04g0452700",-1.9885241,{"$nulls":17},"Os05g0375400",0,3.1620057,{"$nulls":9},"qFLA-2","qFLA-2","leaf and flag leaf angles (QTL)-2","leaf and flag leaf angles (QTL)-2",2," Vegetative organ - Leaf",{"$nulls":5},"LOC_Os08g02640.1, LOC_Os08g02640.2, LOC_Os08g02640.3, LOC_Os08g02640.4, LOC_Os08g02640.5","Os01g0177900","Os12g0502300","Os06g0232300",3.368972,0,null,"SCR8","OsSCR8","SHORT CROWN ROOT 8","Short Crown Root 8",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009266 - response to temperature stimulus, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0048367 - shoot development, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0010449 - root meristem growth, GO:0006952 - defense response, GO:0005524 - ATP binding, GO:0043531 - ADP binding, GO:0048364 - root development, GO:0048830 - adventitious root development","TO:0002685 - crown root number, TO:0000656 - root development trait, TO:0002692 - root meristem development, TO:0000303 - cold tolerance, TO:0000470 - vascular tissue related trait, TO:0000296 - vegetative vigor, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0000432 - temperature response trait, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0000456 - spikelet number, TO:0000457 - total biomass yield, TO:0000654 - shoot development trait, TO:0000476 - growth hormone content","PO:0007520 - root development stage ","Os08g0246300","LOC_Os08g14850.1",null,"Os04g0573900","Os04g0576300",-1.6613526,0,null,"SHL3","shl3, sh3","SHOOTLESS 3","shootless 3, shootless-3",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0020031 - radicle , PO:0020144 - apical meristem ",{"$nulls":3},"Os03g0270700","Os03g0757500",-0.96391296,0,null,"D1","d1, GPA1, GA1, OsGA1, RGA1, dwf1, XA7, RGA, D1/RGA1, D89","DAIKOKU DWARF","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009725 - response to hormone stimulus, GO:0005525 - GTP binding, GO:0004871 - signal transducer activity, GO:0003924 - GTPase activity, GO:0009408 - response to heat, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0006952 - defense response, GO:0006471 - protein amino acid ADP-ribosylation, GO:0005834 - heterotrimeric G-protein complex, GO:0010038 - response to metal ion, GO:0009755 - hormone-mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007275 - multicellular organismal development, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling","TO:0000166 - gibberellic acid sensitivity, TO:0000080 - micronutrient sensitivity, TO:0000207 - plant height, TO:0000132 - basal internode diameter, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000299 - leaf lamina color, TO:0000303 - cold tolerance, TO:0000089 - panicle type, TO:0000734 - grain length, TO:0000326 - leaf color, TO:0002730 - grain shape, TO:0000615 - abscisic acid sensitivity, TO:0000576 - stem length, TO:0000158 - red light sensitivity, TO:0000040 - panicle length, TO:0000391 - seed size, TO:0000135 - leaf length, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000484 - seed shape, TO:0000259 - heat tolerance, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000455 - seed set percent, TO:0000397 - grain size","PO:0009049 - inflorescence , PO:0020039 - leaf lamina , PO:0020142 - stem internode , PO:0000003 - whole plant , PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os05g0333200","LOC_Os05g26890.1","Os10g0430600","Os05g0129000","Os05g0139100",0,2.685197,null,"TIFY10C","OsJAZ7, JAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8","TIFY GENE 10C","Jasmonate ZIM-domain protein 7, Jasmonate ZIM-domain protein 8.",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0005829 - cytosol, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002736 - flower number, TO:0002759 - grain number, TO:0000172 - jasmonic acid sensitivity, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ","Os09g0439200","LOC_Os09g26780.1",null,null,"Os12g0194900",0,-2.0046668]
[{"$nulls":6},"Os01g0788800","LOC_Os01g57890",1.2033843,"Os02g0174300","LOC_Os02g07800","Trihelix",1.2110072,{"$nulls":10},"Os01g0368000","Os02g0702100","Os02g0178100","Os02g0178100",-2.5395918,-1.4953613,null,"Os01g0315700",5.5347314,"Os01g0184100",-1.986811,{"$nulls":17},"Os11g0169200",1.594853,2.4397767,{"$nulls":9},"qFLA-5","qFLA-5","leaf and flag leaf angles (QTL)-5","leaf and flag leaf angles (QTL)-5",5," Vegetative organ - Leaf",{"$nulls":5},"LOC_Os03g32314.1","Os02g0643800","Os07g0222300","Os06g0205100",3.309496,0,null,"SDR7-6","OsSDR7-6","SHORT-CHAIN ALCOHOL DEHYDROGENASE/REDUCTASE 7-6","short-chain alcohol dehydrogenase/reductase 7-6",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0060548 - negative regulation of cell death, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0070265 - necrotic cell death, GO:0009416 - response to light stimulus, GO:0016491 - oxidoreductase activity, GO:0005783 - endoplasmic reticulum, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance, TO:0000075 - light sensitivity, TO:0000399 - grain thickness, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000605 - hydrogen peroxide content, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease",null,"Os07g0663900 ","LOC_Os07g46860.1",null,"Os10g0573900","Os01g0889400",-1.6627002,0,null,"SHL4","shl4, sh4, OsAGO7, SHO2, AGO7, SHL4/SHO2","SHOOTLESS 4","shootless 4, shootless-4, Protein argonaute 7, Protein SHOOTLESS 4, Protein SHOOT ORGANIZATION 2, SHOOT ORGANIZATION2, ARGONAUTE 7, Argonaute 7",3," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Seed - Morphological traits - Embryo","GO:0003676 - nucleic acid binding, GO:0016246 - RNA interference, GO:0010492 - maintenance of shoot apical meristem identity, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000064 - embryo related trait, TO:0000206 - leaf angle, TO:0002681 - leaf curling","PO:0009009 - plant embryo , PO:0020144 - apical meristem ","Os03g0449200","LOC_Os03g33650.1",null,"Os05g0323800","Os11g0544600",-0.98757154,0,null,"SPL8","spl8(bl8), spl8, bl8","SPOTTED LEAF 8","spotted leaf8, spotted leaf-8",5," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os07g0604700","Os12g0263000","Os11g0454000",0,2.6712487,null,"EG2","OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, JAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2","EXTRA GLUME 2","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 10, extra glume 2, TIFY gene 3",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0048449 - floral organ formation, GO:0010582 - floral meristem determinacy, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0009651 - response to salt stress","TO:0000657 - spikelet anatomy and morphology trait, TO:0000172 - jasmonic acid sensitivity, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000276 - drought tolerance, TO:0000590 - grain weight, TO:0000227 - root length, TO:0000615 - abscisic acid sensitivity, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os04g0653000","LOC_Os04g55920.5, LOC_Os04g55920.1, LOC_Os04g55920.2",null,null,"Os03g0764900",-3.6407013,-2.1698039]
[{"$nulls":6},"Os02g0174300","LOC_Os02g07800",1.2110072,"Os02g0648300","LOC_Os02g43300","Trihelix",3.4605591,{"$nulls":10},"Os01g0687800","Os03g0130500","Os06g0713000","Os06g0713000",1.3243607,1.7561938,null,"Os01g0720500",5.5040946,"Os12g0456000",-1.9853998,{"$nulls":17},"Os06g0703500",1.0499412,2.0117123,{"$nulls":9},"qFLA-6","qFLA-6","leaf and flag leaf angles (QTL)-6","leaf and flag leaf angles (QTL)-6",6," Vegetative organ - Leaf",{"$nulls":5},"LOC_Os06g12210.1","Os10g0371000","Os08g0407200","Os11g0143200",3.212064,0,null,"MFAP1","OsMFAP1","MICROFIBRILLAR-ASSOCIATED PROTEIN 1","microfibrillar-associated protein 1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0002237 - response to molecule of bacterial origin, GO:0052542 - callose deposition during defense response, GO:0002679 - respiratory burst during defense response, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin","TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000346 - tiller number, TO:0000371 - yield trait","PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0020142 - stem internode ","Os06g0335101","LOC_Os06g22850.2",null,"Os03g0643300","Os04g0566600",-1.6942984,0,null,"GLU4","glu4-c(t), glu4(t)*, glu11","GLUTELIN 4","lack of glutelin subunit(alpha-2)-4, rice glutelin-11",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":3},"Os03g0344300","Os07g0681500",-1.0149541,0,null,"SPL7","spl7, HSFA4D, HSF10, HSF15, OsHSF15, SP17, OsHsf-15, rHsf10, OsHsfA4d, HSfA4d, lrd13, HSF1","SPOTTED LEAF 7","spotted leaf7, spotted leaf-7, Heat stress transcription factor Spl7, Heat stress transcription factor A-4d, Heat stress transcription factor 15, Heat stress transcription factor 10, Protein SPOTTED LEAF 7, HEAT STRESS TRANSCRIPTION FACTOR A4d, spontaneous lesion 7",5," Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Stress tolerance","GO:0009607 - response to biotic stimulus, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009628 - response to abiotic stimulus, GO:0006950 - response to stress, GO:0009814 - defense response, incompatible interaction, GO:0045449 - regulation of transcription","TO:0000259 - heat tolerance, TO:0000069 - variegated leaf, TO:0000063 - mimic response, TO:0000112 - disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000303 - cold tolerance, TO:0000168 - abiotic stress trait","PO:0009025 - vascular leaf , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os05g0530400","LOC_Os05g45410.1","Os08g0428400","Os10g0430600","Os05g0500600",0,2.6618528,null,"TIFY9","OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ11/TIFY9","TIFY GENE 9","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000172 - jasmonic acid sensitivity, TO:0000207 - plant height, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000148 - viral disease resistance",null,"Os04g0395800","LOC_Os04g32480.1",null,null,"Os10g0580400",-2.7884464,-2.238878]
[{"$nulls":6},"Os06g0140700","LOC_Os06g04870",1.2395021,"Os04g0397500","LOC_Os04g32590","Trihelix",1.9183289,{"$nulls":10},"Os03g0784000","Os02g0217900","Os03g0764900","Os03g0764900",-3.6407013,-2.1698039,null,"Os09g0246500",5.493192,"Os07g0186000",-1.968882,{"$nulls":17},"Os08g0104600",0,3.9559326,{"$nulls":9},"qFLA-7","qFLA-7","leaf and flag leaf angles (QTL)-7","leaf and flag leaf angles (QTL)-7",7," Vegetative organ - Leaf",{"$nulls":5},"LOC_Os08g34380.2, LOC_Os08g34380.1","Os06g0649800","Os09g0567400","Os05g0589700",3.202921,0,null,"_","Gn8.1","_","grain number 8.1",null," Reproductive organ - panicle,  Character as QTL - Yield and productivity",null,"TO:0006032 - panicle size, TO:0002759 - grain number",{"$nulls":4},"Os01g0224700","Os05g0395300",-1.8155246,0,null,"D61","d61*, dwf42, d61, OsBRI1, OSBRI1, BRI1, Os BRI1, Osbri1, OsBRKq1, BRKq1","DWARF 61","dm-type dwarf, dwarf-61, DWARF61, BRASSINOSTEROID INSENSITIVE 1, BR receptor BRASSINOSTEROID INSENSITIVE1, BRASSINOSTEROID-INSENSITIVE1, brassinosteroid insensitive 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0001578 - microtubule bundle formation, GO:0009741 - response to brassinosteroid stimulus, GO:0016049 - cell growth, GO:0004903 - growth hormone receptor activity, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006468 - protein amino acid phosphorylation, GO:0009647 - skotomorphogenesis, GO:0009753 - response to jasmonic acid stimulus, GO:0009729 - detection of brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus","TO:0000145 - internode length, TO:0000357 - growth and development trait, TO:0000085 - leaf rolling, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000255 - sheath blight disease resistance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0006347 - stem intercalary meristem , PO:0009047 - stem , PO:0020142 - stem internode , PO:0020104 - leaf sheath , PO:0020033 - coleoptile ","Os01g0718300","LOC_Os01g52050.1",null,"Os02g0672600","Os01g0922800",-1.0300881,0,null,"CHT1","Cht1*(Chi1), Ch16, Cht1, CHT-1, CH16, RC24, OsChia1a, OsChia1, Chi1, Cht1*, Chi-1, Cht-1, Cht1, RCC1, OsCht-1, PR3","CHITINASE 1","Chitinase1, Chitinase 1, Pathogenesis related (PR)-3 chitinase 1, Class I chitinase a, Chitinase-1(class I)",6," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0008843 - endochitinase activity, GO:0050832 - defense response to fungus, GO:0009723 - response to ethylene stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0006032 - chitin catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0004568 - chitinase activity, GO:0016998 - cell wall macromolecule catabolic process, GO:0008061 - chitin binding, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin, GO:0051707 - response to other organism","TO:0000401 - plant growth hormone sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000439 - fungal disease resistance, TO:0000173 - ethylene sensitivity, TO:0000074 - blast disease, TO:0000315 - bacterial disease resistance",null,"Os06g0726200","LOC_Os06g51060.1","Os06g0326400","Os05g0103200","Os03g0243700",0,2.6563866,null,"ERF101","OsERF#101, OsERF101, OsDERF6, DERF6, AP2/EREBP#089, AP2/EREBP89, OsRap2.6, Rap2.6, ERF113, OsERF113","ETHYLENE RESPONSE FACTOR 101","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 101, drought-responsive ethylene response factor 6, drought-responsive ERF 6, ethylene response factor 101, APETALA2/ethylene-responsive element binding protein 89",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009646 - response to absence of light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0048653 - anther development, GO:0009651 - response to salt stress","TO:0000615 - abscisic acid sensitivity, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000396 - grain yield, TO:0000625 - spikelet density, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000227 - root length, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000276 - drought tolerance, TO:0006002 - proline content, TO:0000449 - grain yield per plant, TO:0000172 - jasmonic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0001083 - inflorescence development stage , PO:0009046 - flower , PO:0025313 - tapetum , PO:0020048 - microspore , PO:0001004 - anther development stage ","Os04g0398000","LOC_Os04g32620.1"]
[{"$nulls":6},"Os06g0662200","LOC_Os06g45140",1.2566763,"Os04g0445600","LOC_Os04g36790","Trihelix",-1.0994588,{"$nulls":10},"Os04g0359700","Os01g0274800","Os02g0673700","Os02g0673700",1.456047,-1.2354975,null,"Os10g0552300",5.4889774,"Os06g0474800",-1.9624877,{"$nulls":17},"Os03g0673800",0,2.217145,{"$nulls":9},"qFLA-9","qFLA-9","leaf and flag leaf angles (QTL)-9","leaf and flag leaf angles (QTL)-9",9," Vegetative organ - Leaf",{"$nulls":6},"Os07g0525100","Os03g0270700","Os08g0442700",3.1167004,0,null,"CYP704A5","OsCYP704A5","CYTOCHROME P450 704A5","Cytochrome P450 704A5",10," Biochemical character,  Reproductive organ - panicle","GO:0005506 - iron ion binding, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0525000","LOC_Os10g38110.1, LOC_Os10g38110.2",null,null,"Os06g0690200",-1.8364196,0,null,"DH","D-h(t)*, Dwf43, D-h","DOMINANT DWARF","Dominant dwarf",1," Vegetative organ - Culm,  Seed - Morphological traits","GO:0007275 - multicellular organismal development, GO:0009740 - gibberellic acid mediated signaling","TO:0000207 - plant height, TO:0000576 - stem length, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000166 - gibberellic acid sensitivity, TO:0000287 - brown rice shape, TO:0000391 - seed size, TO:0000040 - panicle length, TO:0000145 - internode length","PO:0009047 - stem , PO:0009049 - inflorescence ","Os01g0201275 ","LOC_Os01g10460.1",null,"Os03g0215900","Os03g0259300",-1.0309225,0,null,"CHT3","Cht3*, Cht3, Cht-3, CH6, OsChia1c, CHI7, OsCHI11, CHI11, OsPR3, PR3","CHITINASE 3","Chitinase3, Basic endochitinase 1 precursor, Basic endochitinase 1, Chitinase 3, Pathogenesis related (PR)-3 chitinase 3, Class I chitinase c, Chitinase-3(class I), CHITINASE7",6," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004568 - chitinase activity, GO:0051707 - response to other organism, GO:0016998 - cell wall macromolecule catabolic process, GO:0050832 - defense response to fungus, GO:0016231 - beta-N-acetylglucosaminidase activity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0006032 - chitin catabolic process, GO:0008843 - endochitinase activity, GO:0008061 - chitin binding, GO:0006040 - amino sugar metabolic process","TO:0000255 - sheath blight disease resistance",null,"Os06g0726100","LOC_Os06g51050.1","Os02g0537700","Os07g0604700","Os05g0261700",0,2.650769,null,"DHAR1","OsDHAR1, DHAR, cytDHAR, OscytDHAR, OsDHAR","DEHYDROASCORBATE REDUCTASE 1","DHAR class GLUTATHIONE S-TRANSFERASE 1, dehydroascorbate reductase, dehydroascorbate reductase 1, cytosolic dehydroascorbate reductase",5," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010043 - response to zinc ion, GO:0009414 - response to water deprivation, GO:0048830 - adventitious root development, GO:0005507 - copper ion binding, GO:0009610 - response to symbiotic fungus, GO:0019853 - L-ascorbic acid biosynthetic process, GO:0032929 - negative regulation of superoxide release, GO:0005739 - mitochondrion, GO:0046685 - response to arsenic, GO:0010731 - protein amino acid glutathionylation, GO:0043295 - glutathione binding, GO:0009742 - brassinosteroid mediated signaling, GO:0006979 - response to oxidative stress, GO:0005773 - vacuole, GO:0005777 - peroxisome, GO:0005886 - plasma membrane, GO:0009570 - chloroplast stroma, GO:0043903 - regulation of symbiosis, encompassing mutualism through parasitism, GO:0009753 - response to jasmonic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0048046 - apoplast, GO:0010193 - response to ozone, GO:0000302 - response to reactive oxygen species","TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000031 - silicon sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000396 - grain yield",null,"Os05g0116100","LOC_Os05g02530.1"]
[{"$nulls":6},"Os08g0483200","LOC_Os08g37700",1.2590462,"Os04g0602300","LOC_Os04g51320","Trihelix",-1.2535847,{"$nulls":10},"Os04g0671200","Os01g0195000","Os04g0567800","Os04g0567800",1.6114241,-1.2354975,null,"Os02g0543900",5.488409,"Os02g0761200",-1.9575644,{"$nulls":17},"Os02g0635000",0,1.2736211,{"$nulls":9},"SGR","sgr(t), sgr, OsSGR, OsSgr, SGR1, OsSGR1","STAY GREEN LEAF","stay green leaf (t), stay green, staying green during senescence, Stay-Green",9," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0032026 - response to magnesium ion, GO:0009749 - response to glucose stimulus, GO:0009646 - response to absence of light, GO:0015996 - chlorophyll catabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0009507 - chloroplast, GO:0042542 - response to hydrogen peroxide, GO:0009413 - response to flooding, GO:0010150 - leaf senescence, GO:0042594 - response to starvation, GO:0009645 - response to low light intensity stimulus, GO:0050832 - defense response to fungus, GO:0009536 - plastid, GO:0010304 - PSII associated light-harvesting complex II catabolic process","TO:0000010 - magnesium sensitivity, TO:0000524 - submergence tolerance, TO:0000396 - grain yield, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000326 - leaf color, TO:0000460 - light intensity sensitivity, TO:0000298 - chlorophyll ratio, TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity, TO:0002712 - stay green trait, TO:0000075 - light sensitivity","PO:0009025 - vascular leaf , PO:0001054 - 4 leaf senescence stage ","Os09g0532000","LOC_Os09g36200.1",null,"Os02g0152900","Os05g0565900","Os02g0450000",3.1121986,0,null,"WTG1","OTUB1, OsOTUB1, OsOTUB1.1, OsOTUB1.2, qNPT1, OsWTG1","WIDE AND THICK GRAIN 1","new plant type 1, OTU domain-containing ubiquitin aldehyde-binding protein 1, wide and thick grain 1, otubain 1",8," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004843 - ubiquitin-specific protease activity, GO:0019784 - NEDD8-specific protease activity, GO:0005634 - nucleus, GO:0042127 - regulation of cell proliferation, GO:0071108 - protein K48-linked deubiquitination, GO:0043130 - ubiquitin binding","TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000382 - 1000-seed weight, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000397 - grain size, TO:0002730 - grain shape, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000051 - stem strength, TO:0000346 - tiller number","PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009010 - seed , PO:0009015 - portion of vascular tissue , PO:0020123 - root cap , PO:0020149 - quiescent center , PO:0006079 - shoot meristem ","Os08g0537800","LOC_Os08g42540.1, LOC_Os08g42540.2",null,null,"Os02g0714300",-1.8385254,0,null,"DU6A","du6a(t)*, du6, du6a","DULL ENDOSPERM 6A","dull endosperm-6a, dull endosperm-6",null," Seed - Physiological traits - Storage substances","GO:0005976 - polysaccharide metabolic process, GO:0009568 - amyloplast starch grain","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009089 - endosperm ",{"$nulls":3},"Os08g0537800","Os03g0241300",-1.0711874,0,null,"DW1","dw1(fh1), fh1, dw1","DEEP WATER TOLERANCE 1","deep water tolerance1, deep water tolerance 1, deep water tolerance-1",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding","TO:0000170 - elongation ability, TO:0000103 - deepwater stress","PO:0000003 - whole plant ",null,null,"Os10g0370500","Os08g0428400","Os06g0264200",0,2.6492913,null,"PSAF","Usaf, OsPS1-F, PS1-F","PHOTOSYSTEM I SUBUNIT","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0015979 - photosynthesis, GO:0009538 - photosystem I reaction center","TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000346 - tiller number","PO:0025034 - leaf ","Os03g0778100","LOC_Os03g56670.1, LOC_Os03g56670.2"]
[{"$nulls":6},"Os11g0496600","LOC_Os11g30370",1.261798,"Os10g0516500","LOC_Os10g37240","Trihelix",-1.1469765,{"$nulls":10},"Os06g0286310","Os01g0757500","Os02g0726300","Os02g0726300",2.4783533,3.431485,null,"Os01g0756900",5.4876976,"Os06g0107750",-1.9533561,{"$nulls":17},"Os05g0103200",2.04943,2.154865,{"$nulls":9},"qFLW-1-1(t) (QFlw1)","qFLW-1-1(t) (QFlw1)","flag leaf width (QTL)-1-1(t)","flag leaf width (QTL)-1-1(t)",1," Vegetative organ - Leaf",{"$nulls":6},"Os07g0690900","Os08g0206900","Os01g0659900",3.0577822,0,null,"ALDH2B1  ","OsALDH2B1, OsALDH2b, ALDH2b","ALDEHYDE DEHYDROGENASE 2B1","Aldehyde dehydrogenase 2B1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005739 - mitochondrion, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009742 - brassinosteroid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0016491 - oxidoreductase activity, GO:0004029 - aldehyde dehydrogenase (NAD) activity, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0009556 - microsporogenesis, GO:0048653 - anther development, GO:0051321 - meiotic cell cycle, GO:0048608 - reproductive structure development, GO:0009555 - pollen development","TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002668 - jasmonic acid content, TO:0000476 - growth hormone content, TO:0000040 - panicle length, TO:0002688 - leaf lamina joint bending, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000437 - male sterility, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os06g0270900","LOC_Os06g15990.1",null,null,"Os09g0513900",-1.8961983,0,null,"DU6B","du6b(t)*, du6b, du7","DULL ENDOSPERM 6B","dull endosperm-6b, dull endosperm-7",null," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process","TO:0000196 - amylose content, TO:0000105 - dull endosperm","PO:0009089 - endosperm ",{"$nulls":3},"Os03g0200500","Os04g0583500",-1.083526,0,null,"PI13","Pi13(t), Pi13(t)*, Pi13","PYRICULARIA ORYZAE RESISTANCE 13","Pyricularia oryzae resistance 13, Magnaporthe grisea resistance 13 (Maowangu), Blast resistance 13",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000486 - seed color","PO:0009025 - vascular leaf ",null,null,"Os05g0491200","Os06g0326400","Os07g0663700",0,2.6424472,null,"RFT1","FT-L 3, OsFTL3, FT-L3, RFT, OsRFT1","RICE FLOWERING-LOCUS T 1","Rice Flowering-locus T 1, RICE FLOWERING LOCUS T 1, FT-like gene 3, RFT",6," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0031210 - phosphatidylcholine binding, GO:0030154 - cell differentiation, GO:0010229 - inflorescence development, GO:0009909 - regulation of flower development, GO:0005634 - nucleus, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0005737 - cytoplasm, GO:0005543 - phospholipid binding, GO:0009908 - flower development, GO:0008429 - phosphatidylethanolamine binding, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0048573 - photoperiodism, flowering","TO:0000137 - days to heading, TO:0000371 - yield trait, TO:0000447 - filled grain number",null,"Os06g0157500","LOC_Os06g06300.1"]
[{"$nulls":6},"Os02g0220400","LOC_Os02g12790",1.3303136,"Os06g0145800","LOC_Os06g05350","Whirly",1.7282958,{"$nulls":10},"Os07g0112000","Os07g0197100","Os05g0155400","Os05g0155400",3.2103226,2.987538,null,"Os11g0170900",5.4829445,"Os02g0134300",-1.9522705,{"$nulls":17},"Os02g0562700",0,1.3901037,{"$nulls":9},"qFLW-4-1(t) (QFlw4)","qFLW-4-1(t) (QFlw4)","flag leaf width (QTL)-4-1(t)","flag leaf width (QTL)-4-1(t)",4," Vegetative organ - Leaf",{"$nulls":6},"Os03g0337600","Os08g0422600","Os03g0302900",2.9698544,0,null,"NTMC2T4.1","OsNTMC2T4.1, OsSYT-5, SYT-5, SYT5","N-TERMINAL-TM-C2 DOMAIN PROTEIN 4.1","N-terminal-TM-C2 domain protein 4.1, N-terminal trans- membrane and C2 domain protein 4.1, NTMC2 type 4.1 protein, NTMC2 family gene 4.1, silencing of the synaptotagmin-5",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0006950 - response to stress, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005513 - detection of calcium ion, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008289 - lipid binding, GO:0005783 - endoplasmic reticulum","TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000043 - root anatomy and morphology trait, TO:0002637 - leaf size, TO:0000566 - stomatal frequency, TO:0000540 - leaf area, TO:0000152 - panicle number, TO:0000396 - grain yield, TO:0001018 - transpiration rate, TO:0000136 - relative water content, TO:0000084 - root number, TO:0000227 - root length, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000421 - pollen fertility, TO:0002667 - abscisic acid content, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate, TO:0001017 - water use efficiency, TO:0000276 - drought tolerance, TO:0000181 - seed weight, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000040 - panicle length",null,"Os07g0409100","LOC_Os07g22640.4, LOC_Os07g22640.1, LOC_Os07g22640.2, LOC_Os07g22640.3",null,null,"Os01g0976800",-2.0206013,0,null,"DU7","Du7(t)*, Du7, Du8","DULL ENDOSPERM 7","Dull endosperm-7, Dull endosperm-8",null," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process","TO:0000196 - amylose content, TO:0000105 - dull endosperm, TO:0000053 - pollen sterility","PO:0009089 - endosperm , PO:0020091 - obsolete microgametophyte ",{"$nulls":3},"Os05g0187800","Os04g0520700",-1.087243,0,null,"PI8","Pi8, Pi-8","PYRICULARIA ORYZAE RESISTANCE 8","Pyricularia oryzae resistance 8, Magnaporthe grisea resistance-8, Blast resistance 8",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000505 - leaf weight, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os12g0615400","Os02g0537700","Os06g0693200",0,2.631947,null,"SQD2.2","OsSQD2, SQD2, OsSQD2.2","SULFOQUINOVOSYLDIACYLGLYCEROL SYNTHASE 2.2","sulfoquinovosyldiacylglycerol 2, sulfoquinovosyl transferase-like protein 2.2, Sulfoquinovosyldiacylglycerol synthase 2.2",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046510 - UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, GO:0009941 - chloroplast envelope, GO:0046506 - sulfolipid biosynthetic process, GO:0009812 - flavonoid metabolic process, GO:0009247 - glycolipid biosynthetic process, GO:0005737 - cytoplasm, GO:0009813 - flavonoid biosynthetic process, GO:0016036 - cellular response to phosphate starvation, GO:0042594 - response to starvation, GO:0006794 - phosphorus utilization","TO:0002661 - seed maturation, TO:0000346 - tiller number, TO:0000604 - fat and essential oil content, TO:0000102 - phosphorus sensitivity, TO:0000180 - spikelet fertility, TO:0000290 - flavonoid content","PO:0025034 - leaf ","Os01g0142300","LOC_Os01g04920.3, LOC_Os01g04920.2, LOC_Os01g04920.1"]
[{"$nulls":6},"Os01g0636500","LOC_Os01g44970",1.3535758,"Os01g0246700","LOC_Os01g14440","WRKY",-1.8576914,{"$nulls":10},"Os07g0510900","Os02g0245100","Os06g0571800","Os06g0571800",1.420514,3.0469806,null,"Os03g0135700",5.4800797,"Os08g0364900",-1.9497353,{"$nulls":17},"Os04g0555000",0,1.7134777,{"$nulls":9},"qFLW-6-1(t) (QFlw6)","qFLW-6-1(t) (QFlw6)","flag leaf width (QTL)-6-1(t)","flag leaf width (QTL)-6-1(t)",6," Vegetative organ - Leaf",{"$nulls":6},"Os12g0194900","Os09g0471900","Os01g0825000",2.958329,0,null,"PAAB1-1","OsALMT7, ALMT7","PANICLE APICAL ABORTION 1-1","Aluminum-activated malate transporter 7, panicle apical abortion1-1",2," Biochemical character,  Reproductive organ - panicle,  Character as QTL - Yield and productivity","GO:0009705 - plant-type vacuole membrane, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane, GO:0015743 - malate transport, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0012501 - programmed cell death, GO:0016021 - integral to membrane, GO:0015140 - malate transmembrane transporter activity","TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000590 - grain weight, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0006032 - panicle size","PO:0001083 - inflorescence development stage , PO:0009005 - root ","Os02g0673100   ","LOC_Os02g45160.1",null,null,"Os08g0149000",-2.108522,0,null,"EML2","eml2*, eml2","EMBRYOLESS 2","embryoless2, embryoless 2, embryoless-2",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009266 - response to temperature stimulus, GO:0009653 - anatomical structure morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",{"$nulls":3},"Os10g0573400","Os09g0443500",-1.0882392,0,null,"PI9","Pi9(t), Pi9(t)*, Pi9, Pi-9(t)","PYRICULARIA ORYZAE RESISTANCE 9","Pyricularia oryzae resistance 9, Magnaporthe grisea resistance-9, Blast resistance 9",6," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0009620 - response to fungus, GO:0043531 - ADP binding","TO:0000506 - nitrogen recycling, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ","Os06g0146100","LOC_Os06g05359.1","Os10g0564500","Os03g0856700","Os01g0894600",2.353301,2.6284146,null,"ATG8B","OsATG8b, Atg8b","AUTOPHAGY ASSOCIATED GENE 8B","autophagy 8b, OsAuTophaGy8b, AUTOPHAGY RELATED8b",4," Biochemical character,  Vegetative organ - Root,  Coloration - Chlorophyll,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0005773 - vacuole, GO:0033110 - CVT vesicle membrane, GO:0042594 - response to starvation, GO:0005829 - cytosol, GO:0005776 - autophagic vacuole, GO:0016020 - membrane, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0019740 - nitrogen utilization, GO:0006995 - cellular response to nitrogen starvation, GO:0048316 - seed development, GO:0000421 - autophagic vacuole membrane, GO:0005874 - microtubule, GO:0000045 - autophagic vacuole formation, GO:0015031 - protein transport, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0010508 - positive regulation of autophagy, GO:0006914 - autophagy, GO:0048364 - root development","TO:0000266 - chalky endosperm, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0001027 - net photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000457 - total biomass yield, TO:0000357 - growth and development trait, TO:0000506 - nitrogen recycling, TO:0000352 - plant dry weight, TO:0000656 - root development trait, TO:0000325 - soluble protein content, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000449 - grain yield per plant, TO:0000706 - hull color, TO:0000440 - grain number per plant, TO:0000011 - nitrogen sensitivity","PO:0009005 - root , PO:0025034 - leaf , PO:0007632 - seed maturation stage , PO:0001170 - seed development stage ","Os04g0624000","LOC_Os04g53240.1, LOC_Os04g53240.4, LOC_Os04g53240.3, LOC_Os04g53240.2"]
[{"$nulls":6},"Os06g0695700","LOC_Os06g48050",1.3618697,"Os01g0734000","LOC_Os01g53260","WRKY",-1.2598414,{"$nulls":10},"Os09g0503100","Os09g0565700","Os02g0806300","Os02g0806300",-1.3477267,-0.9889768,null,"Os01g0897300",5.4734015,"Os02g0119600",-1.9468204,{"$nulls":17},"Os03g0337600",0,2.157176,{"$nulls":9},"qFLW-8-1(t) (QFlw8)","qFLW-8-1(t) (QFlw8)","flag leaf width (QTL)-8-1(t)","flag leaf width (QTL)-8-1(t)",8," Vegetative organ - Leaf",{"$nulls":6},"Os02g0137800","Os03g0344300","Os05g0571200",2.9214642,0,null,"PSL1","OsPGL13, PGL13, OsPSL1, OsPG1, PG1, LTN-212","PHOTO-SENSITIVE LEAF ROLLING 1","Polygalacturonases-Like 13, PG-like 13, leaf tip necrosis 212, Polygalacturonase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004650 - polygalacturonase activity, GO:0005576 - extracellular region, GO:0005975 - carbohydrate metabolic process, GO:0070265 - necrotic cell death, GO:0009414 - response to water deprivation, GO:0052386 - cell wall thickening, GO:0045490 - pectin catabolic process, GO:0009642 - response to light intensity, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000040 - panicle length, TO:0000605 - hydrogen peroxide content, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0000085 - leaf rolling, TO:0000276 - drought tolerance, TO:0000441 - humidity related trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0296200","LOC_Os01g19170.1",null,null,"Os10g0117000",-2.1200578,0,null,"ES1","Es1(t)*, Es1","EXTRUDING STIGMA 1","Extruding stigma-1",6," Seed - Physiological traits - Storage substances","GO:0007275 - multicellular organismal development, GO:0030154 - cell differentiation","TO:0000044 - stigma exsertion","PO:0009082 - spikelet floret , PO:0006061 - stigma epidermis ",{"$nulls":3},"Os07g0668900","Os04g0508300",-1.0954713,0,null,"SAL2","sal2*, sal3","SALT PROTEIN","salT protein, salt protein, salt tolerance-3",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress","TO:0000429 - salt sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os05g0447200","Os10g0370500","Os02g0729400",0,2.62098,null,"RBCS4","RbcS, RbcS4, OsRBCS4, OsRbcS4","RUBISCO SMALL SUBUNIT 4","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4",12," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016984 - ribulose-bisphosphate carboxylase activity, GO:0015977 - carbon utilization by fixation of carbon dioxide, GO:0009853 - photorespiration, GO:0004497 - monooxygenase activity, GO:0015979 - photosynthesis","TO:0000396 - grain yield, TO:0001015 - photosynthetic rate, TO:0000167 - cytokinin sensitivity, TO:0000457 - total biomass yield, TO:0000011 - nitrogen sensitivity",null,"Os12g0292400","LOC_Os12g19470.2, LOC_Os12g19470.1"]
[{"$nulls":6},"Os10g0370500","LOC_Os10g22520",1.3736,"Os08g0499300","LOC_Os08g38990","WRKY",-1.3271414,{"$nulls":10},"Os12g0226700","Os03g0157900","Os02g0806400","Os02g0806400",-1.6658403,-1.787879,null,"Os02g0623300",5.432092,"osa-miR439c",-1.9445199,{"$nulls":17},"Os01g0633100",1.5410696,1.1146822,{"$nulls":9},"qFLW-12-1(t) (QFlw12)","qFLW-12-1(t) (QFlw12)","flag leaf width (QTL)-12-1(t)","flag leaf width (QTL)-12-1(t)",12," Vegetative organ - Leaf",{"$nulls":6},"Os03g0118400","Os02g0167700","Os03g0667100",2.7861977,0,null,"DEL1","OsPLL12, PLL12","DWARF AND EARLY-SENESCENCE LEAF 1","dwarf and early-senescence leaf1, Pectate lyase-like 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0022402 - cell cycle process, GO:0030570 - pectate lyase activity, GO:0046872 - metal ion binding, GO:0009658 - chloroplast organization, GO:0048573 - photoperiodism, flowering, GO:0048316 - seed development, GO:0010150 - leaf senescence, GO:0045490 - pectin catabolic process, GO:0043069 - negative regulation of programmed cell death, GO:0010394 - homogalacturonan metabolic process","TO:0000653 - seed development trait, TO:0000605 - hydrogen peroxide content, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0001015 - photosynthetic rate, TO:0000132 - basal internode diameter, TO:0000145 - internode length, TO:0001013 - lateral root number, TO:0000227 - root length, TO:0000249 - leaf senescence, TO:0006006 - monosaccharide content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000695 - leaf margin color, TO:0000495 - chlorophyll content, TO:0000137 - days to heading, TO:0000326 - leaf color","PO:0009047 - stem , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0000003 - whole plant , PO:0001170 - seed development stage ","Os10g0457200","LOC_Os10g31910.1",null,null,"Os01g0114100",-2.1976218,0,null,"GLB1","glb1(t)*, glb1(t), glb1, alpha-Glb, Glb-1, OsGlb1, Glb, OsEnS-77","LACK OF ALPHA-GLOBULIN","lack of alpha-globulin, alpha-globulin, 26 kDa globulin, 19 kDa globulin, 19kD globulin, endosperm-specific gene 77, Globulin23",5," Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait, TO:0002661 - seed maturation","PO:0009010 - seed ","Os05g0499100","LOC_Os05g41970.1",null,"Os03g0183000","Os01g0179400",-1.1389996,0,null,"SBE1","sbe1, Rbe1. Sbe1, sbe1*(QEI), RBE1, BEI, SBE I, QEI, OsBEI, BE1, OsSBEI, SBEI","STARCH BRANCHING ENZYME 1","starch branching enzyme1 (Q enzyme1), starch branching enzyme1, Q enzyme1, starch branching enzyme 1, Q-enzyme 1, \\1, 4-alpha-glucan branching enzyme, chloroplast precursor\\\", \\\"1, 4-alpha-glucan branching enzyme, chloroplast\\\", \\\"1, 4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic\\\", Q-enzyme 1, starch branching enzyme 1, starch branching enzyme-1, branching enzyme-I, Q-Enzyme I, starch Branching enzyme isoform Type A, Branching enzyme isoform Type A, BE isoform type A, branching enzyme 1\"",6," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005976 - polysaccharide metabolic process, GO:0003844 - 1,4-alpha-glucan branching enzyme activity, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0019252 - starch biosynthetic process, GO:0043169 - cation binding, GO:0009536 - plastid, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0009568 - amyloplast starch grain, GO:0005982 - starch metabolic process, GO:0009413 - response to flooding","TO:0000097 - amylopectin content, TO:0000489 - carbohydrate composition related trait, TO:0000196 - amylose content, TO:0000333 - sugar content, TO:0000286 - submergence sensitivity, TO:0000590 - grain weight","PO:0025034 - leaf , PO:0009089 - endosperm ","Os06g0726400","LOC_Os06g51084.3, LOC_Os06g51084.1, LOC_Os06g51084.2, LOC_Os06g51084.8, LOC_Os06g51084.7, LOC_Os06g51084.6, LOC_Os06g51084.5, LOC_Os06g51084.4","Os08g0532200","Os05g0491200","Os02g0810900",0,2.6135428,null,"NRFG3","OsENODL17, ENODL17, OsNRFG3","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 3","early nodulin-like protein 17, neo-tetraploid rice fertility related gene 3",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009055 - electron carrier activity, GO:0005507 - copper ion binding, GO:0046658 - anchored to plasma membrane","TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0009066 - anther , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os06g0553800","LOC_Os06g36010.1"]
[{"$nulls":6},"Os02g0594800","LOC_Os02g38130",1.3745664,"Os11g0490900","LOC_Os11g29870","WRKY",-2.0225337,{"$nulls":10},"Os12g0597400","Os07g0489200","Os07g0160100","Os07g0160100",3.168094,2.8481522,null,"Os08g0445000",5.427522,"Os07g0152700",-1.935855,{"$nulls":17},"Os07g0156200",3.268673,4.1536126,{"$nulls":9},"IM1","OsIM1, OsIM1a, OsIM2, OsIM, PTOX1","OSIMASE","OsIMase, plastid terminal oxidase 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009579 - thylakoid, GO:0022900 - electron transport chain, GO:0016117 - carotenoid biosynthetic process, GO:0009916 - alternative oxidase activity, GO:0007585 - respiratory gaseous exchange, GO:0070469 - respiratory chain, GO:0009507 - chloroplast, GO:0009688 - abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding, GO:0009651 - response to salt stress, GO:0009657 - plastid organization","TO:0000329 - tillering ability, TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0002667 - abscisic acid content, TO:0002672 - auxin content, TO:0000478 - abscisic acid concentration, TO:0000069 - variegated leaf",null,"Os04g0668900","LOC_Os04g57320.1, LOC_Os04g57320.2",null,"Os03g0810100","Os01g0223600","Os09g0241100",2.641684,0,null,"SLG","OsSLG","SLENDER GRAIN","slender grain",8," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0010143 - cutin biosynthetic process, GO:0005634 - nucleus, GO:0010268 - brassinosteroid homeostasis, GO:0001558 - regulation of cell growth, GO:0010229 - inflorescence development, GO:0010090 - trichome morphogenesis, GO:0005737 - cytoplasm, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0005829 - cytosol, GO:0051179 - localization","TO:0000621 - inflorescence development trait, TO:0002676 - brassinosteroid content, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield","PO:0000034 - vascular system , PO:0025477 - floral organ primordium , PO:0009038 - palea , PO:0000229 - flower meristem , PO:0001083 - inflorescence development stage , PO:0009037 - lemma , PO:0020141 - stem node , PO:0006327 - spikelet meristem , PO:0025127 - primordium ","Os08g0562500","LOC_Os08g44840.1",null,null,"Os01g0103100",-2.2874813,0,null,"GLE4","gle4*, gle4","GLOBULAR EMBRYO 4","globular embryo4, globular embryo 4, globular embryo-4",null," Seed - Morphological traits - Embryo","GO:0009888 - tissue development, GO:0009887 - organ morphogenesis","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",{"$nulls":3},"Os09g0522200","Os01g0765000",-1.1396238,0,null,"SE5","Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, YGL2, YGL2/HO1","PHOTOSENSITIVITY 5","Photosensitivity5, Photosensitivity 5, Photoperiod-sensitivity-5, heme oxygenase 1, heme oxygenase-1, haem oxygenase-1, photoperiod sensitivity5, PHOTOPERIOD SENSITIVITY 5, YELLOW-GREEN LEAF2, YELLOW GREEN LEAF 2",6," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0003700 - transcription factor activity, GO:0010024 - phytochromobilin biosynthetic process, GO:0009409 - response to cold, GO:0060359 - response to ammonium ion, GO:0006979 - response to oxidative stress, GO:0006788 - heme oxidation, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0009658 - chloroplast organization, GO:0010229 - inflorescence development, GO:0010019 - chloroplast-nucleus signaling pathway, GO:0009585 - red, far-red light phototransduction, GO:0009507 - chloroplast, GO:0048573 - photoperiodism, flowering, GO:0004392 - heme oxygenase (decyclizing) activity, GO:0009648 - photoperiodism, GO:0015979 - photosynthesis, GO:0009536 - plastid, GO:0010075 - regulation of meristem growth","TO:0000429 - salt sensitivity, TO:0000229 - photoperiod sensitivity, TO:0000137 - days to heading, TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000298 - chlorophyll ratio, TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0002715 - chloroplast development trait, TO:0002616 - flowering time, TO:0000303 - cold tolerance, TO:0000469 - days to maturity","PO:0020033 - coleoptile , PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009013 - portion of meristem tissue , PO:0009049 - inflorescence , PO:0020148 - shoot apical meristem , PO:0020103 - flag leaf , PO:0025034 - leaf ","Os06g0603000","LOC_Os06g40080.1","Os06g0132400","Os12g0615400","Os08g0102000",0,2.6119964,null,"UCL8","OsUCL8","UCLACYANIN-LIKE PROTEIN 8","uclacyanin-like protein 8, uclacyanin 8",3," Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0010109 - regulation of photosynthesis, GO:0055070 - copper ion homeostasis, GO:0005737 - cytoplasm, GO:0070623 - regulation of thiamin biosynthetic process, GO:0009555 - pollen development, GO:0080092 - regulation of pollen tube growth, GO:0005507 - copper ion binding, GO:0009055 - electron carrier activity","TO:0002600 - flower organ size, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000447 - filled grain number, TO:0000214 - anther shape, TO:0000396 - grain yield","PO:0009010 - seed , PO:0000230 - inflorescence meristem ","Os03g0709100","LOC_Os03g50140.1"]
[{"$nulls":6},"Os07g0581366","LOC_Os07g39310",1.3780867,"Os07g0160100","LOC_Os07g06620","YABBY",2.8481522,{"$nulls":10},"Os06g0681600","Os01g0193900","Os01g0871200","Os01g0871200",-1.379191,-1.065425,null,"Os10g0544200",5.418375,"Os02g0634600",-1.9351217,{"$nulls":17},"Os01g0293900",3.268673,4.1536126,{"$nulls":9},"OUL1","ROC5, Roc5(t), Roc5, GL2-5, OsROC5, CLF1, OsCLF1, OsOUL1","OUTCURVED LEAF 1","Rice outmost cell-specific gene 5(t), Rice outermost cell-specific gene-5, Homeobox-leucine zipper protein ROC5, Homeodomain transcription factor ROC5, HD-ZIP protein ROC5, Protein RICE OUTERMOST CELL-SPECIFIC 5, GLABRA 2-like homeobox protein 5, outcurved leaf1, Rice ooutmost cell-specific gene5, curly leaf 1",2," Vegetative organ - Leaf,  Other","GO:0051302 - regulation of cell division, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding","TO:0000276 - drought tolerance, TO:0000492 - leaf shape, TO:0000064 - embryo related trait","PO:0009025 - vascular leaf , PO:0009009 - plant embryo ","Os02g0674800","LOC_Os02g45250.1",null,"Os03g0235900","Os03g0215900","Os01g0646300",2.6251109,0,null,"LPL2",null,"LESS PRONOUNCED LOBE EPIDERMAL CELL 2","less pronounced lobe epidermal cell2, PIROGI/Specifically Rac1-associated protein 1 (PIR/SRA1)-like protein",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle","GO:0007015 - actin filament organization, GO:0045010 - actin nucleation, GO:0045604 - regulation of epidermal cell differentiation","TO:0000227 - root length, TO:0000207 - plant height, TO:0000566 - stomatal frequency, TO:0000040 - panicle length",null,"Os03g0143800","LOC_Os03g05020.1",null,null,"Os03g0176800",-2.3431058,0,null,"ITH","Ith*, Ith","INHIBITOR FOR DIFFICULT","Inhibitor for difficult threshing (easy threshing)",null," Seed - Physiological traits - Shattering","GO:0009838 - abscission","TO:0000406 - panicle threshability","PO:0009049 - inflorescence ",{"$nulls":3},"Os06g0270900","Os10g0498700",-1.1622273,0,null,"SPL4","spl4(bl5), spl4, bl5","SPOTTED LEAF 4","spotted leaf4, spotted leaf 4, spotted leaf-4",6," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os03g0855700","Os10g0564500","Os08g0566600",0,2.6051998,null,"TAD1","TAD1, OsCCS52A, TE, OsWD40-61, TAD1/TE, CCS52A1","TILLERING AND DWARF 1","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0010030 - positive regulation of seed germination, GO:0032877 - positive regulation of DNA endoreduplication, GO:0042023 - DNA endoreduplication, GO:0010091 - trichome branching, GO:0010082 - regulation of root meristem growth, GO:0048507 - meristem development, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0016049 - cell growth, GO:0005737 - cytoplasm","TO:0000329 - tillering ability, TO:0002692 - root meristem development, TO:0000656 - root development trait, TO:0000615 - abscisic acid sensitivity, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000166 - gibberellic acid sensitivity","PO:0005029 - root primordium , PO:0009005 - root , PO:0006085 - root meristem , PO:0007520 - root development stage , PO:0007057 - 0 seed germination stage ","Os03g0123300","LOC_Os03g03150.1, LOC_Os03g03150.2"]
[{"$nulls":6},"Os07g0425000","LOC_Os07g24230",1.3912657,"Os08g0438400","LOC_Os08g34010","ZF-HD",-1.6525875,{"$nulls":10},"Os06g0695500","Os06g0156900","Os01g0195000","Os01g0195000",-0.9520299,-0.9494095,null,"Os01g0913300",5.415975,"Os06g0202400",-1.9340004,{"$nulls":17},"Os01g0670800",1.4240936,1.0322542,{"$nulls":9},"ADL2","adl2","ADAXIALIZED LEAF 2","adaxialized leaf-2",null," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000576 - stem length, TO:0000492 - leaf shape","PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":3},"Os07g0191600","Os12g0641400","Os09g0455300",2.4607484,0,null,"WP3",null,"WHITE PANICLE 3","WHITE PANICLE3",1," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others","GO:0010027 - thylakoid membrane organization, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0009658 - chloroplast organization","TO:0002701 - lutein content, TO:0000326 - leaf color, TO:0000201 - panicle color, TO:0000069 - variegated leaf, TO:0002715 - chloroplast development trait, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000289 - carotene content","PO:0009046 - flower , PO:0000025 - root tip ","Os01g0306650","LOC_Os01g20100.1",null,null,"Os05g0421900",-2.6399226,0,null,"MR1","mr1*, mr1","MULTIPLE RADICLE 1","multiple radicle-1",null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development","TO:0000250 - vigor related trait, TO:0000019 - seedling height","PO:0000003 - whole plant , PO:0009006 - shoot system ",{"$nulls":3},"Os06g0658900","Os03g0270700",-1.2140936,0,null,"STVA","Stva(St1), St1, Stva, Stv1","STRIPE DISEASE RESISTANCE A","Stripe disease resistance, Stripe disease resistance-a, Stripe disease resistance-1, STRIPE DISEASE RESISTANCE",6," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000148 - viral disease resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os12g0118400","Os05g0447200","Os01g0303600",4.029588,2.591104,null,"LABA1","LOGL6, OsLOGL6, An-2","LONG AND BARBED AWN 1","LOG LIKE phosphoribohydrolase 6, LOG LIKE 6, LOG-like 6, Lonely Guy Like protein 6, long and barbed awn 1, Awn-2",4," Biochemical character,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080038 - positive regulation of cytokinin mediated signaling, GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds, GO:0009821 - alkaloid biosynthetic process, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0009691 - cytokinin biosynthetic process","TO:0000346 - tiller number, TO:0002660 - cytokinin content, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0002718 - awn anatomy and morphology trait, TO:0000072 - awn length",null,"Os04g0518800","LOC_Os04g43840.1"]
[{"$nulls":6},"Os06g0712700","LOC_Os06g49840",1.468964,"Os01g0110200","LOC_Os01g02010",0,5.0858483,{"$nulls":10},"Os05g0134400","Os01g0944900","Os01g0951100","Os01g0951100",3.6229203,3.5703247,null,"Os01g0378100",5.3934464,"Os03g0655000",-1.9319369,{"$nulls":17},"Os03g0238600",0,1.3971219,{"$nulls":9},"GO","go, go1, pla3, PLA3, PLA3/GO, OsLBD3-7, LBD3-7","GOLIATH","goliath, PLASTOCHRON 3, plastochron3, PLASTOCHRON3/GOLIATH, lateral organ boundaries domain 3-7",3," Biochemical character,  Vegetative organ - Leaf,  Heterochrony,  Seed - Morphological traits - Embryo","GO:0004181 - metallocarboxypeptidase activity, GO:0004180 - carboxypeptidase activity, GO:0010081 - regulation of inflorescence meristem growth, GO:0009640 - photomorphogenesis, GO:0007275 - multicellular organismal development, GO:0009908 - flower development, GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0005634 - nucleus, GO:0010080 - regulation of floral meristem growth, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010305 - leaf vascular tissue pattern formation, GO:0005886 - plasma membrane, GO:0010229 - inflorescence development, GO:0010082 - regulation of root meristem growth, GO:0048366 - leaf development, GO:0051781 - positive regulation of cell division, GO:0006508 - proteolysis","TO:0000287 - brown rice shape, TO:0000064 - embryo related trait, TO:0000655 - leaf development trait","PO:0009009 - plant embryo , PO:0009010 - seed , PO:0001050 - leaf development stage ","Os03g0790600","LOC_Os03g57660.1, LOC_Os03g57660.2, LOC_Os03g57660.3, LOC_Os03g57660.4, LOC_Os03g57670.1",null,"Os03g0582300","Os04g0206700","Os03g0811100",2.3960612,0,null,"BZR3","OsBZR3","BRASSINAZOLE RESISTANT 3","BRASSINAZOLE-RESISTANT3",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000371 - yield trait",null,"Os06g0552300","LOC_Os06g35900.1",null,null,"Os04g0398000",-2.758197,0,null,"PS","Ra*, bhlh13, OsbHLH013, OsbHLH13, Ra, OSB1, Ra1, OsGL3A, GL3A, OsB2, OsMYC7, MYC7, OsPs, Ps, OsHLH1, HLH1","PURPLE STIGMA","Rice R gene (Anthocyanin biosynthesis) : a, basic helix loop helix 13, Rice R gene (Anthocyanin biosynthesis)-a, GLABRA3A, GLABRA 3A, Myelocytomatosis oncogene transcription factor 7, purple stigma",4," Coloration - Anthocyanin,  Seed - Morphological traits","GO:0046983 - protein dimerization activity, GO:0005739 - mitochondrion, GO:0009536 - plastid, GO:0005634 - nucleus, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0009812 - flavonoid metabolic process","TO:0000487 - endosperm color, TO:0000185 - stigma color, TO:0000190 - seed coat color, TO:0000071 - anthocyanin content","PO:0009073 - stigma , PO:0009088 - seed coat , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0009047 - stem ","Os04g0557800","LOC_Os04g47080.1",null,"Os03g0208500","Os05g0323800",-1.2204713,0,null,"XA7","Xa7","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 7","Xanthomonas oryzae pv. oryzae resistance 7, Xanthomonas campestris pv. oryzae resistance-7, Xanthomonas oryzae pv. oryzae resistance-7",6," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os03g0121700","Os08g0532200","Os07g0407700",2.4074306,2.579023,null,"_","OsNIA1, OsNia1, NIA1, Nia1, OsNR, NR, OsNR2, NR2, NIA2","_","nitrate reductase, nitrate reductase 2, NO3-reductase 2, NADH/NADPH-dependent NO3-reductase 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0006809 - nitric oxide biosynthetic process, GO:0009738 - abscisic acid mediated signaling, GO:0010157 - response to chlorate, GO:0009055 - electron carrier activity, GO:0020037 - heme binding, GO:0050660 - FAD binding, GO:0009416 - response to light stimulus, GO:0009610 - response to symbiotic fungus, GO:0009703 - nitrate reductase (NADH) activity, GO:0043546 - molybdopterin cofactor binding, GO:0030151 - molybdenum ion binding, GO:0005506 - iron ion binding, GO:0005773 - vacuole, GO:0005886 - plasma membrane, GO:0042128 - nitrate assimilation","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000276 - drought tolerance",null,"Os02g0770800","LOC_Os02g53130.1"]
[{"$nulls":6},"Os03g0239300","LOC_Os03g13600",1.4908657,"Os01g0117200","LOC_Os01g02780",0,-2.0088966,{"$nulls":10},"Os01g0293900","Os03g0797500","Os02g0572900","Os02g0572900",-1.2639445,-1.0505309,null,"Os02g0191800",5.3782306,"Os02g0803600",-1.9311813,{"$nulls":17},"Os02g0726300",2.4783533,3.431485,{"$nulls":9},"OSH15","OSH15, OsH15, OSKN3, Oskn3, HOS3, D6, d6, OSH15/Oskn3, HB253, H15, OsKNOX3, KNOX3","HOMEOBOX 15","Oryza sativa homeobox15, Rice KNOX gene-15, Homeobox protein knotted-1-like 12, Homeobox protein OSH15, Homeobox protein HOS3, Homeobox protein knotted-1-like 3, KNOX PROTEIN 3, Oryza sativa Homeobox 15",7," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0003677 - DNA binding, GO:0043565 - sequence-specific DNA binding, GO:0080006 - internode patterning, GO:0048831 - regulation of shoot development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000145 - internode length, TO:0000492 - leaf shape","PO:0009025 - vascular leaf , PO:0007089 - stem elongation stage , PO:0005005 - shoot internode ","Os07g0129700","LOC_Os07g03770.1",null,"Os03g0237100","Os08g0537800","Os07g0605200",2.3901968,0,null,"GATA28","OsGATA28","GATA TRANSCRIPTION FACTOR 28","GATA transcription factor 28, GATA factor 28",11," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Other","GO:0006366 - transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0030154 - cell differentiation, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:2000028 - regulation of photoperiodism, flowering, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0005667 - transcription factor complex","TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000137 - days to heading",null,"Os11g0187200 ","LOC_Os11g08410.1",null,null,"Os11g0588100",-2.7786925,0,null,"RIV1","riv1*","RICE VIVIPARY 1","rice vivipary-1",null," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination",{"$nulls":5},"Os03g0839900","Os03g0344300",-1.2273537,0,null,"BL3","bl3","BROWN LEAF SPOT 3","brown leaf spot3, brown leaf spot 3, brown leaf spot-3",6," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000326 - leaf color, TO:0000063 - mimic response, TO:0000221 - glume color, TO:0000069 - variegated leaf","PO:0009025 - vascular leaf , PO:0009088 - seed coat ",null,null,"Os08g0414700","Os06g0132400","Os11g0113700",3.8011553,2.5787117,null,"_","SIP2, OsSIP2, OsFIP, FIP","_","SKIP interacting protein 2, SKIPa-interacting protein 2, SKIPa-interacting protein 2",6," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009506 - plasmodesma, GO:0007276 - gamete generation, GO:0009556 - microsporogenesis, GO:0000278 - mitotic cell cycle, GO:0005634 - nucleus, GO:0005856 - cytoskeleton, GO:0006396 - RNA processing, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0001510 - RNA methylation, GO:0009790 - embryonic development, GO:0048236 - plant-type spore development","TO:0000437 - male sterility, TO:0000727 - sporogenesis, TO:0000620 - embryo development trait, TO:0000445 - seed number, TO:0000180 - spikelet fertility, TO:0000455 - seed set percent, TO:0000531 - anther length, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000485 - sterility related trait","PO:0007631 - plant embryo stage , PO:0020048 - microspore , PO:0025543 - tapetum cell ","Os06g0474200 ","LOC_Os06g27970.1"]
[{"$nulls":6},"Os08g0161800","LOC_Os08g06450",1.4910184,"Os01g0127400","LOC_Os01g03660",0,2.3219495,{"$nulls":10},"Os07g0156200","Os02g0324700","Os02g0198300","Os02g0198300",2.1420994,1.8940853,null,"Os12g0197100",5.367574,"Os09g0484900",-1.9309164,{"$nulls":17},"Os05g0500600",0,2.6618528,{"$nulls":9},"HOX1","Oshox1, OsHox1","HOMEOBOX GENE 1","rice homeobox gene 1, Homeobox-leucine zipper protein HOX1, Homeodomain transcription factor HOX1, HD-ZIP protein HOX1",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0010600 - regulation of auxin biosynthetic process, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0010252 - auxin homeostasis, GO:0016563 - transcription activator activity, GO:0043565 - sequence-specific DNA binding, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048366 - leaf development, GO:0009959 - negative gravitropism","TO:0002693 - gravity response trait, TO:0000567 - tiller angle, TO:0002672 - auxin content, TO:0000655 - leaf development trait","PO:0005020 - vascular bundle , PO:0025275 - procambium , PO:0025127 - primordium , PO:0020148 - shoot apical meristem , PO:0001050 - leaf development stage ","Os10g0561800","LOC_Os10g41230.1",null,"Os07g0614400","Os06g0706400","Os07g0681300",2.3521602,0,null,"PLS4","OsPLS4","PREMATURE LEAF SENESCENCE 4","3-Oxoacyl-[acyl-carrier-protein] reductase, Premature Leaf Senescence 4",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0016491 - oxidoreductase activity, GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process","TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000303 - cold tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0001027 - net photosynthetic rate, TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os04g0376300","LOC_Os04g30760.1",null,null,"Os02g0106100",-3.254226,0,null,"RIV2","riv2*","RICE VIVIPARY 2","rice vivipary-2",null," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination",{"$nulls":5},"Os02g0745100","Os02g0672600",-1.270368,0,null,"ALK","alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6, SS2a","ALKALI DEGENERATION","alkali degeneration, ALKALI DEGENERATION, \\Soluble starch synthase 2-3, chloroplast precursor\\\", \\\"Soluble starch synthase 2-3, chloroplast\\\", \\\"Soluble starch synthase 2-3, chloroplastic/amyloplastic\\\", Soluble starch synthase II-3, Starch synthase IIa, soluble starch synthase IIa, Starch synthase-IIa, Starch synthase IIa\"",6," Seed - Morphological traits - Endosperm,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009501 - amyloplast, GO:0009011 - starch synthase activity, GO:0009536 - plastid, GO:0009413 - response to flooding, GO:0019252 - starch biosynthetic process, GO:0009507 - chloroplast","TO:0000462 - gelatinization temperature, TO:0000488 - seed composition based quality trait, TO:0000134 - alkali digestion, TO:0000097 - amylopectin content, TO:0000286 - submergence sensitivity, TO:0000379 - cool paste viscosity","PO:0009089 - endosperm ","Os06g0229800","LOC_Os06g12450.1","Os09g0433600","Os03g0855700","Os08g0345800",2.1964571,2.5752084,null,"MYBS2","OsMYBS2","TRANSCRIPTION FACTOR MYBS2","transcription factor MYBS2",10," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009739 - response to gibberellin stimulus, GO:0033500 - carbohydrate homeostasis, GO:0009743 - response to carbohydrate stimulus, GO:0003677 - DNA binding, GO:0009408 - response to heat, GO:0009744 - response to sucrose stimulus, GO:0010187 - negative regulation of seed germination, GO:0009414 - response to water deprivation, GO:0047484 - regulation of response to osmotic stress, GO:0080050 - regulation of seed development, GO:0005634 - nucleus, GO:0045926 - negative regulation of growth, GO:0042594 - response to starvation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity","TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance, TO:0000590 - grain weight, TO:0000259 - heat tolerance, TO:0000449 - grain yield per plant",null,"Os10g0562100","LOC_Os10g41260.1"]
[{"$nulls":6},"Os07g0549600","LOC_Os07g36460",1.4914767,"Os01g0136100","LOC_Os01g04370",0,0.9654362,{"$nulls":10},"Os03g0368900","Os12g0123200","Os01g0715000","Os01g0715000",1.0142423,1.0285195,null,"Os08g0446800",5.350241,"Os12g0609900",-1.9294013,{"$nulls":17},"Os05g0332300",0,2.441363,{"$nulls":9},"CDR1","cdr1, cdr1*","CELL DEATH AND RESISTANCE 1","cell death and resistance1",null," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response, GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",{"$nulls":3},"Os02g0635000","Os03g0200500","Os02g0811000",2.3510377,0,null,"ST2","ALR, OsDCD, DCD","STRIPE 2 ","STRIPE2, albinic leaf and growth retardation, dCMP deaminase",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0009658 - chloroplast organization, GO:0008284 - positive regulation of cell proliferation, GO:0045787 - positive regulation of cell cycle, GO:0006281 - DNA repair, GO:0004132 - dCMP deaminase activity, GO:0005739 - mitochondrion, GO:0016787 - hydrolase activity, GO:0010027 - thylakoid membrane organization, GO:0015995 - chlorophyll biosynthetic process, GO:0008270 - zinc ion binding, GO:0010020 - chloroplast fission","TO:0002715 - chloroplast development trait, TO:0000391 - seed size, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0000069 - variegated leaf",null,"Os01g0765000","LOC_Os01g55974.1, LOC_Os01g55974.2, LOC_Os01g55974.3",null,null,"Os02g0120500",-3.2845008,0,null,"NPP1","OsNPP1, OsPAP27b, PAP27B","NUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE 1","Nucleotide Pyrophosphatase/Phosphodiesterase 1, Purple acid phosphatase 27b",8," Biochemical character,  Seed - Physiological traits - Storage substances","GO:0005618 - cell wall, GO:0004528 - phosphodiesterase I activity, GO:0046872 - metal ion binding, GO:0003993 - acid phosphatase activity, GO:0004551 - nucleotide diphosphatase activity","TO:0000696 - starch content, TO:0000233 - root volume, TO:0000207 - plant height",null,"Os08g0531000","LOC_Os08g41880.1",null,"Os08g0174700","Os03g0215900",-1.2779297,0,null,"PIZ","Piz, Piz (Pi2, Pi-z, Piz), Pi-z, Pi2, Pi-2","PYRICULARIA ORYZAE RESISTANCE Z","Pyricularia oryzae resistance-z, Magnaporthe grisea resistance-z, Blast resistance z, Pyricularia oryzae resistance-2, Magnaporthe grisea resistance-2, Blast resistance 2",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus, GO:0006952 - defense response, GO:0043531 - ADP binding","TO:0000522 - stomatal conductance, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0020141 - stem node , PO:0009049 - inflorescence , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os06g0286700","LOC_Os06g17900.1","Os01g0723400","Os12g0118400","Os08g0553800",0,2.5750682,null,"ARF2","OsARF2, OsARF4, ARF4","AUXIN RESPONSE FACTOR 2","auxin response factor-2, auxin response factor 2, auxin response factor-4, auxin response factor 4",1," Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0048316 - seed development, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0010928 - regulation of auxin mediated signaling pathway","TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os01g0927600","LOC_Os01g70270.4, LOC_Os01g70270.3, LOC_Os01g70270.2, LOC_Os01g70270.1"]
[{"$nulls":6},"Os01g0174000","LOC_Os01g07880",1.4943272,"Os01g0144100","LOC_Os01g05080",0,3.3075333,{"$nulls":10},"Os02g0236800","Os02g0643800","Os12g0515500","Os12g0515500",-1.7212644,-1.0432993,null,"Os04g0554200",5.3340816,"Os08g0494200",-1.9260122,{"$nulls":17},"Os01g0618900",3.0894601,2.7548828,{"$nulls":9},"CDR2","cdr2, cdr2*","CELL DEATH AND RESISTANCE 2","cell death and resistance2",null," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response, GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",{"$nulls":4},"Os10g0403000","Os01g0848400",2.314164,0,null,"MED14_1 ","OsMED14_1","MEDIATOR 14_1 ","Mediator 14_1, Mediator subunit 14_1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0001944 - vasculature development, GO:0048653 - anther development, GO:0070847 - core mediator complex, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048366 - leaf development, GO:0009556 - microsporogenesis, GO:0051301 - cell division, GO:0010252 - auxin homeostasis, GO:0016592 - mediator complex","TO:0000146 - seed length, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000621 - inflorescence development trait, TO:0000382 - 1000-seed weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000370 - leaf width, TO:0001035 - stem width, TO:0000470 - vascular tissue related trait, TO:0000539 - large vascular bundle number, TO:0000558 - small vascular bundle number, TO:0000257 - root branching, TO:0001013 - lateral root number, TO:0000050 - inflorescence branching, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002672 - auxin content, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009066 - anther , PO:0025034 - leaf , PO:0009005 - root , PO:0009071 - anther wall tapetum , PO:0001004 - anther development stage , PO:0009051 - spikelet , PO:0020048 - microspore , PO:0005029 - root primordium , PO:0001083 - inflorescence development stage , PO:0001050 - leaf development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0332800 ","LOC_Os08g24400.1",null,null,"Os05g0203800",-3.5836766,0,null,"MADS51","OsMADS51, OsMADS65, MADS65, qHd1, DLN36, OsDLN36","MADS BOX GENE 51","MADS box gene51, DLN repressor 36, DLN motif protein 36",1," Reproductive organ - Heading date,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0006350 - transcription, GO:0003700 - transcription factor activity","TO:0002616 - flowering time, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000303 - cold tolerance, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0000432 - temperature response trait",null,"Os01g0922800","LOC_Os01g69850.1",null,"Os02g0140300","Os08g0537800",-1.2991232,0,null,"BL2","bl2(blm), blm, bl2","BROWN LEAF SPOT 2","brown leaf spot2, brown leaf spot 2, brown leaf spot-2",6," Tolerance and resistance - Lesion mimic","GO:0015996 - chlorophyll catabolic process","TO:0000326 - leaf color, TO:0000221 - glume color, TO:0000056 - stem color, TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009088 - seed coat ",null,null,"Os02g0601300","Os03g0121700","Os07g0686800",0,2.5641897,null,"ARF6A","OsARF6a, OsARF6, ARF6","AUXIN RESPONSE FACTOR 6A","auxin response factor-6a, auxin response factor 6a, auxin response factor-6, auxin response factor 6, auxin responsive factor 6",2," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0009808 - lignin metabolic process, GO:0030244 - cellulose biosynthetic process, GO:0009733 - response to auxin stimulus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009834 - secondary cell wall biogenesis, GO:0009908 - flower development, GO:0009734 - auxin mediated signaling pathway","TO:0002688 - leaf lamina joint bending, TO:0000396 - grain yield, TO:0000163 - auxin sensitivity, TO:0000074 - blast disease, TO:0000731 - lignin content, TO:0000124 - flag leaf angle","PO:0020039 - leaf lamina , PO:0020103 - flag leaf ","Os02g0164900","LOC_Os02g06910.1"]
[{"$nulls":6},"Os09g0460300","LOC_Os09g28620",1.5051641,"Os01g0210500","LOC_Os01g11230",0,1.6222515,{"$nulls":10},"Os02g0833900","Os01g0128000","Os06g0667100","Os06g0667100",-1.7911767,-1.2620894,null,"Os05g0441400",5.3184514,"Os01g0639600",-1.9205837,{"$nulls":17},"Os03g0738400",0,2.250975,{"$nulls":9},"CDR3","Cdr3, Cdr3*","CELL DEATH AND RESISTANCE 3","Cell death and resistance3",null," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0009620 - response to fungus, GO:0006952 - defense response","TO:0000468 - leaf blast disease resistance, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",{"$nulls":4},"Os02g0575700","Os02g0187800",2.2997735,0,null,"CYP704A3","OsCYP704A3","P-450 704A3","Cytochrome P450 704A3",4," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape","GO:0005506 - iron ion binding, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding, GO:0010229 - inflorescence development","TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000391 - seed size, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os04g0573900","LOC_Os04g48460.1, LOC_Os04g48460.2",null,null,"Os03g0215400",-3.8352463,0,null,"RISBZ1","OsbZIP58, OsEnS-92, OsSMF1, SMF1, OsRISBZ1, RISBZ1/bZIP58","BZIP ACTIVATOR 1","bZIP transcription factor 58, rice seed b-Zipper 1, endosperm-specific gene 92, seed maturation factor 1, rice seed basic leucine zipper 1",7," Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Other","GO:0010371 - regulation of gibberellin biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0012501 - programmed cell death, GO:0009845 - seed germination, GO:0003700 - transcription factor activity, GO:0010431 - seed maturation, GO:0009408 - response to heat","TO:0002673 - amino acid content, TO:0000490 - protein composition related trait, TO:0002661 - seed maturation, TO:0000432 - temperature response trait","PO:0005360 - aleurone layer , PO:0007057 - 0 seed germination stage , PO:0007632 - seed maturation stage , PO:0009089 - endosperm ","Os07g0182000","LOC_Os07g08420.1",null,"Os04g0106300","Os03g0200500",-1.3408308,0,null,"PI17","Pi17(t), Pi17, Pi-17(t)","PYRICULARIA ORYZAE RESISTANCE 17","Pyricularia oryzae resistance 17, Magnaporthe grisea resistance-17, Blast resistance 17",7," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000492 - leaf shape, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os06g0561000","Os08g0414700","Os05g0497600",2.45413,2.5479977,null,"ARF17","OsARF17","AUXIN RESPONSE FACTOR 17","auxin response factor-17, auxin response factor 17",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0009834 - secondary cell wall biogenesis, GO:0003677 - DNA binding, GO:0006350 - transcription, GO:0051607 - defense response to virus, GO:0009808 - lignin metabolic process, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway, GO:0030244 - cellulose biosynthetic process, GO:0009926 - auxin polar transport, GO:0009908 - flower development","TO:0000163 - auxin sensitivity, TO:0000074 - blast disease, TO:0000206 - leaf angle, TO:0000567 - tiller angle, TO:0000124 - flag leaf angle, TO:0000731 - lignin content, TO:0000020 - black streak dwarf virus resistance, TO:0002688 - leaf lamina joint bending, TO:0002693 - gravity response trait, TO:0000396 - grain yield","PO:0020039 - leaf lamina , PO:0020103 - flag leaf ","Os06g0677800","LOC_Os06g46410.2, LOC_Os06g46410.1"]
[{"$nulls":6},"Os12g0609500","LOC_Os12g41590",1.5288626,"Os01g0219000","LOC_Os01g11970",0,-1.0124993,{"$nulls":10},"Os07g0157600","Os01g0720400","Os04g0548700","Os04g0548700",2.7146962,2.2563107,null,"Os10g0352000",5.312212,"Os07g0659300",-1.9204081,{"$nulls":17},"Os03g0333400",0,4.14127,{"$nulls":9},"PNH1","OsPNH1","PINHEAD 1","Oryza sativa pinhead1, PINHEAD1, ZLL/PNH homologous protein, Protein argonaute PNH1, Protein PINHEAD homolog 1, pinhead1, OsPINHEAD1",6," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf","GO:0019827 - stem cell maintenance, GO:0003676 - nucleic acid binding, GO:0031047 - gene silencing by RNA, GO:0005737 - cytoplasm, GO:0048366 - leaf development, GO:0003743 - translation initiation factor activity, GO:0010073 - meristem maintenance","TO:0000492 - leaf shape, TO:0000207 - plant height, TO:0000472 - vascular bundle number, TO:0006017 - meristem identity","PO:0006023 - bundle sheath , PO:0000036 - leaf vascular system , PO:0000225 - peripheral zone , PO:0000230 - inflorescence meristem , PO:0004726 - adaxial side of leaf primordium , PO:0006018 - leaf adaxial epidermis , PO:0006019 - leaf abaxial epidermis , PO:0009015 - portion of vascular tissue ","Os06g0597400","LOC_Os06g39640.1",null,null,"Os02g0559800","Os04g0613000",2.2946336,0,null,"WP2","TRXZ, OsPAP10, PAP10, OsPAP10/OsTRXz, OsTRXz, TRXz","WHITE PANICLE 2","PEP-associated protein 10, plastid-encoded plastid polymerase-associated protein 10, plastidic thioredoxin Z, THIOREDOXINZ, thioredoxin Z, white panicle2",8," Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0006662 - glycerol ether metabolic process, GO:0009507 - chloroplast, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009579 - thylakoid, GO:0009657 - plastid organization, GO:0009658 - chloroplast organization, GO:0015035 - protein disulfide oxidoreductase activity, GO:0016671 - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor, GO:0031347 - regulation of defense response, GO:0034051 - negative regulation of plant-type hypersensitive response, GO:0034599 - cellular response to oxidative stress, GO:0045454 - cell redox homeostasis, GO:0047134 - protein-disulfide reductase activity, GO:0009408 - response to heat, GO:0009295 - nucleoid, GO:0042793 - transcription from plastid promoter, GO:0005737 - cytoplasm, GO:0006952 - defense response, GO:0008219 - cell death, GO:0004791 - thioredoxin-disulfide reductase activity","TO:0000326 - leaf color, TO:0000259 - heat tolerance, TO:0000201 - panicle color, TO:0002715 - chloroplast development trait, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0020104 - leaf sheath ","Os08g0378900","LOC_Os08g29110.2, LOC_Os08g29110.1",null,null,"Os04g0282400",-6.613068,0,null,"RPBF","OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3, OsRPBF, OsDOF7","PROLAMIN BOX BINDING FACTOR","rice (Oryza sativa) prolamin box binding factor, pyrimidine box-binding protein, endosperm-specific gene 34, Dof zinc factor 10, Dof transcription factor 10, DNA BINDING WITH ONE FINGER 10",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0045449 - regulation of transcription","TO:0002673 - amino acid content, TO:0000276 - drought tolerance, TO:0000179 - biotic stress trait",null,"Os02g0252400","LOC_Os02g15350.1",null,"Os07g0175100","Os05g0187800",-1.3682857,0,null,"SPL9","spl9","SPOTTED LEAF 9","spotted leaf9, spotted leaf 9, spotted leaf-9",7," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000069 - variegated leaf","PO:0009025 - vascular leaf , PO:0009047 - stem ",null,null,"Os10g0493600","Os09g0433600","Os01g0848200",0,2.543742,null,"ASP1","OsLIS-L1, OsWD40-155, ASP1, TPR2, OsTPR2, OsREL2, REL2, OsTPL3, TPL3, OsTPL2, TPL2, ASP-LSL","ABERRANT SPIKELET AND PANICLE 1","Lissencephaly type-1-like 1, ABERRANT SPIKELET AND PANICLE1, TOPLESS-RELATED PROTEIN 2, TOPLESS 3, aberrant spikelet-long sterile lemma, ROMOSA ENHANCER LOCI2",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0010073 - meristem maintenance, GO:0003714 - transcription corepressor activity, GO:0010229 - inflorescence development, GO:0019827 - stem cell maintenance, GO:0009734 - auxin mediated signaling pathway, GO:0010072 - primary shoot apical meristem specification, GO:0005634 - nucleus","TO:0002660 - cytokinin content, TO:0002672 - auxin content, TO:0000040 - panicle length, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0000145 - internode length, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000240 - sterile lemma length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000050 - inflorescence branching, TO:0000152 - panicle number, TO:0002768 - spikelet length, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0002727 - sterile lemma width, TO:0020033 - glume length, TO:0020034 - glume width, TO:0000371 - yield trait, TO:0000621 - inflorescence development trait, TO:0000650 - lemma length, TO:0002675 - gibberellic acid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os08g0162100","LOC_Os08g06480.1"]
[{"$nulls":6},"Os05g0586600","LOC_Os05g50930",1.5925454,"Os01g0225600","LOC_Os01g12580",0,1.7882758,{"$nulls":10},"Os01g0378100","Os03g0132900","Os05g0455200","Os05g0455200",4.5274816,1.769432,null,"Os03g0188400",5.307608,"Os04g0538000",-1.9123079,{"$nulls":17},"Os03g0368900",4.013238,7.180881,{"$nulls":9},"BRD1","brd1, OsDWARF, DWARF, OsBR6ox, BR6ox, CYP85A1, CYP85A4, OsDWF, CYP85A1/OsDWARF, OsBRD1, OsCYP85A1","BRASSINOSTEROID-DEFICIENT DWARF 1","brassinosteroid-dependent1, brassinosteroid-dependent 1, brassinosteroid-deficient dwarf1, brassinosteroid-deficient dwarf 1, Cytochrome P450 85A1, C6-oxidase, BR-6-oxidase, Dwarf protein, cytochrome P450 CYP85A4, brassinosteroid deficient1, BR-deficient dwarf1, BR-deficient dwarf 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005506 - iron ion binding, GO:0080113 - regulation of seed growth, GO:0007275 - multicellular organismal development, GO:0009719 - response to endogenous stimulus, GO:0055114 - oxidation reduction, GO:0009647 - skotomorphogenesis, GO:0022900 - electron transport chain, GO:0016020 - membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007165 - signal transduction, GO:0016132 - brassinosteroid biosynthetic process, GO:0020037 - heme binding, GO:0001578 - microtubule bundle formation, GO:0009637 - response to blue light, GO:0016021 - integral to membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0010268 - brassinosteroid homeostasis, GO:0009753 - response to jasmonic acid stimulus, GO:0004497 - monooxygenase activity, GO:0009055 - electron carrier activity, GO:0060359 - response to ammonium ion","TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000642 - leaf sheath diameter, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000085 - leaf rolling, TO:0000370 - leaf width, TO:0000159 - blue light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000227 - root length, TO:0002676 - brassinosteroid content, TO:0000391 - seed size, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000492 - leaf shape, TO:0000145 - internode length","PO:0001031 - 4 root elongation stage ","Os03g0602300","LOC_Os03g40540.1",null,null,"Os01g0315800","Os05g0373300",2.2896612,0,null,"CYP94D7","OsCYP94D7","CYTOCHROME P450 94D7","Cytochrome P450 94D7",1," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0020037 - heme binding, GO:0016021 - integral to membrane, GO:0010229 - inflorescence development, GO:0009694 - jasmonic acid metabolic process, GO:0009651 - response to salt stress, GO:0009611 - response to wounding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage ","Os01g0804400 ","LOC_Os01g59020.1",null,null,"Os06g0474200",0,-0.9868986,null,"WAK98","OsWAK98, OsRLCK287, RLCK287","WALL-ASSOCIATED KINASE GENE 98","Receptor-like Cytoplasmic Kinase 287",10," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0112700","LOC_Os10g02360.1",null,"Os01g0159800","Os10g0573400",-1.3692966,0,null,"WBPH1","Wph1(Wbph), Wbph1, Wph1","WHITEBACKED PLANTHOPPER RESISTANCE 1","Whitebacked planthopper resistance1, Whitebacked planthopper resistance 1, Whitebacked planthopper resistance-1",7," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance",{"$nulls":3},"Os04g0567800","Os01g0723400","Os02g0115700",0,2.5351803,null,"CYP20-2","OsCYP20-2, OsCYP-11, OsNuCYP20-2","CYCLOPHILIN 20-2","cyclophilin 20-2, rice thylakoid lumenal cyclophilin OsCYP20-2, cyclophilin 11",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth, GO:0009409 - response to cold, GO:0009533 - chloroplast stromal thylakoid, GO:0006457 - protein folding, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0080050 - regulation of seed development, GO:0009535 - chloroplast thylakoid membrane, GO:0009543 - chloroplast thylakoid lumen, GO:0010275 - NAD(P)H dehydrogenase complex assembly, GO:0000245 - spliceosome assembly, GO:0009507 - chloroplast, GO:0005634 - nucleus","TO:0000303 - cold tolerance, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0000040 - panicle length, TO:0002730 - grain shape, TO:0000734 - grain length",null,"Os05g0103200","LOC_Os05g01270.1"]
[{"$nulls":6},"Os01g0210500","LOC_Os01g11230",1.6222515,"Os01g0235100","LOC_Os01g13390",0,1.630047,{"$nulls":10},"Os05g0135500","Os03g0792500","Os06g0140700","Os06g0140700",2.8959248,1.2395021,null,"Os01g0875700",5.3056884,"Os05g0557400",-1.911023,{"$nulls":17},"Os12g0274700",0,4.865291,{"$nulls":9},"GRF1","OsGRF1","GROWTH-REGULATING FACTOR 1","growth-regulating factor1",2," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0048366 - leaf development, GO:0009411 - response to UV, GO:0009741 - response to brassinosteroid stimulus, GO:0009733 - response to auxin stimulus, GO:0016563 - transcription activator activity, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002637 - leaf size, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000492 - leaf shape, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000160 - UV light sensitivity, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009009 - plant embryo , PO:0000017 - vascular leaf primordium , PO:0020148 - shoot apical meristem ","Os02g0776900","LOC_Os02g53690.1",null,null,"Os05g0150500","Os07g0129700",2.2871413,0,null,"_",null,"_",null,2," Biochemical character,  Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0016021 - integral to membrane, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0186900  ","LOC_Os02g09400.1",null,null,"Os04g0444100",0,-1.0263926,null,"AMY1C","Amy1A/C*(RAmy1A/C), alpha Amy10, Amy1C, RAmy1A/C, Amy1A/C*, Amy3, RAmy1C, OsAmy1C, alphaAmy10-C","ALPHA-AMYLASE 1C","Alpha-amylase1C, Alpha-amylase 1C, Amylase-3, Alpha-amylase-1A, alpha-amylase 10-C",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0004556 - alpha-amylase activity, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0005975 - carbohydrate metabolic process, GO:0005509 - calcium ion binding","TO:0000259 - heat tolerance","PO:0007057 - 0 seed germination stage ","Os02g0765400","LOC_Os02g52700.1",null,"Os01g0103800","Os07g0668900",-1.374946,0,null,"XA K*","xa k*, XAK, xak*, xak","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE K","Xanthomonas oryzae pv. oryzae resistance-k, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE K, Xanthomonas campestris pv. oryzae resistance-k",7," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os11g0169200","Os02g0601300","Os10g0422600",0,2.5280125,null,"APO1","apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393, Pbl6/APO1, Pbl6, OsPbl6","ABERRANT PANICLE ORGANIZATION 1","aberrant panicle organization 1, aberrant panicle organization-1, STRONG CULM 2, STRONG CULM2, F-box protein 321, PRIMARY BRANCH LENGTH6, PRIMARY BRANCH LENGTH 6",6," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030154 - cell differentiation","TO:0000068 - lodging incidence, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000339 - stem thickness, TO:0002639 - shoot branching, TO:0000040 - panicle length, TO:0000641 - primary branch length, TO:0000456 - spikelet number, TO:0000052 - primary branching of inflorescence, TO:0000051 - stem strength, TO:0000499 - flower anatomy and morphology trait, TO:0000089 - panicle type, TO:0000371 - yield trait","PO:0009082 - spikelet floret , PO:0009049 - inflorescence ","Os06g0665400","LOC_Os06g45460.1"]
[{"$nulls":6},"Os01g0235100","LOC_Os01g13390",1.630047,"Os01g0238500","LOC_Os01g13690",0,2.4488654,{"$nulls":10},"Os01g0294700","Os10g0562100","Os03g0123500","Os03g0123500",4.8892865,3.811927,null,"Os06g0132500",5.295942,"Os05g0530400",-1.9081851,{"$nulls":17},"Os11g0242800",2.7024975,3.8949242,{"$nulls":9},"MADS57","OsMADS57, MADS-57","MADS BOX GENE 57","MADS box gene57, MADS-box transcription factor 57",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0048364 - root development, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0060359 - response to ammonium ion, GO:0010423 - negative regulation of brassinosteroid biosynthetic process, GO:0006350 - transcription, GO:0010167 - response to nitrate, GO:0006355 - regulation of transcription, DNA-dependent, GO:0015706 - nitrate transport, GO:0009629 - response to gravity, GO:0016036 - cellular response to phosphate starvation, GO:0006995 - cellular response to nitrogen starvation, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling, GO:0051607 - defense response to virus","TO:0000148 - viral disease resistance, TO:0000168 - abiotic stress trait, TO:0001007 - coleoptile length, TO:0000586 - seminal root length, TO:0000227 - root length, TO:0002693 - gravity response trait, TO:0000145 - internode length, TO:0000656 - root development trait, TO:0002676 - brassinosteroid content, TO:0000206 - leaf angle","PO:0007520 - root development stage , PO:0001031 - 4 root elongation stage , PO:0009005 - root , PO:0005352 - xylem , PO:0000074 - parenchyma cell , PO:0020124 - root stele ","Os02g0731200","LOC_Os02g49840.1, LOC_Os02g49840.2, LOC_Os02g49840.3, LOC_Os02g49840.4",null,null,"Os05g0155200","Os01g0357100",2.2584693,0,null,"CYP92A9","OsCYP92A9","CYTOCHROME P450 92A9","cytochrome P450 71A1, Cytochrome P450 92A9",9," Biochemical character,  Reproductive organ - panicle,  Coloration - Anthocyanin","GO:0010229 - inflorescence development, GO:0009813 - flavonoid biosynthetic process, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0016020 - membrane, GO:0002238 - response to molecule of fungal origin, GO:0046677 - response to antibiotic","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os09g0441400   ","LOC_Os09g26960.1",null,null,"Os03g0640100",-1.3389326,-1.0269638,null,"CDPK31","OsCDPK31, OsCPK31","CALCIUM-DEPENDENT PROTEIN KINASE 31","calcium-dependent protein kinase",null," Biochemical character,  Seed,  Seed - Morphological traits - Endosperm","GO:0010857 - calcium-dependent protein kinase activity, GO:0043036 - starch grain, GO:0010431 - seed maturation","TO:0002661 - seed maturation","PO:0009001 - fruit , PO:0007633 - endosperm development stage ",{"$nulls":3},"Os02g0807100","Os03g0183000",-1.3754607,0,null,"SPL5","spl5(bl6,spl5-1), bl6, spl5, SF3b3","SPOTTED LEAF 5","spotted leaf5, spotted leaf 5, spotted leaf-5, splicing factor 3b subunit 3",7," Tolerance and resistance - Lesion mimic","GO:0003676 - nucleic acid binding, GO:0006952 - defense response, GO:0005634 - nucleus","TO:0000063 - mimic response, TO:0000069 - variegated leaf","PO:0009025 - vascular leaf ","Os07g0203700","LOC_Os07g10390.1","Os01g0113200","Os06g0561000","Os02g0817900",1.1431576,2.516514,null,"LK3","lk3(t), lk3(t)*, SG3, GS3, SG3-GS3, OsGW3, OsGS3, RGG3/GS3/Mi/OsGGC1, RGG3, Mi, OsGGC1, GGC1, OsSYL3, SYL3","LONG KERNEL 3","long kernel 3, long kernel-3, grain size, grain length and weight protein, GRAIN SIZE 3, G gamma subunit GS3, Heterotrimeric G Protein gamma3 Subunit, style length 3",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0007275 - multicellular organismal development, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000592 - 1000-dehulled grain weight, TO:0000382 - 1000-seed weight, TO:0000402 - grain width, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002731 - grain length to width ratio, TO:0000137 - days to heading, TO:0000396 - grain yield, TO:0000146 - seed length, TO:0000391 - seed size, TO:0000162 - seed quality, TO:0002730 - grain shape, TO:0000040 - panicle length, TO:0000734 - grain length","PO:0009049 - inflorescence , PO:0009010 - seed ","Os03g0407400"]
[{"$nulls":6},"Os10g0437700","LOC_Os10g30162",1.6509336,"Os01g0239100","LOC_Os01g13760",0,-1.1356636,{"$nulls":10},"Os01g0326300","Os01g0778100","Os02g0125700","Os02g0125700",1.2156931,2.3285046,null,"Os06g0549300",5.287023,"Os02g0159700",-1.9032897,{"$nulls":17},"Os07g0558400",0,4.7045493,{"$nulls":9},"HDAC1","OsHDAC1, HDA702, OsHDA702, HDA1, OsHDA1, HDT702, OsHDT702","CLASS-1 TYPE HISTONE DEACETYLASE 1","class-1 type histone deacetylase 1, histone deacetylase 1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance","GO:0004407 - histone deacetylase activity, GO:0009734 - auxin mediated signaling pathway, GO:0009617 - response to bacterium, GO:0048364 - root development, GO:0006338 - chromatin remodeling, GO:0003714 - transcription corepressor activity","TO:0000227 - root length, TO:0000656 - root development trait, TO:0000339 - stem thickness, TO:0000370 - leaf width","PO:0007520 - root development stage ","Os06g0583400","LOC_Os06g38470.1, LOC_Os06g38470.2, LOC_Os06g38470.3",null,null,"Os06g0703900","Os01g0883900",2.258114,0,null,"_",null,"_",null,4," Biochemical character,  Reproductive organ - panicle","GO:0005506 - iron ion binding, GO:0010229 - inflorescence development, GO:0016020 - membrane, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0020037 - heme binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os04g0407900    ","LOC_Os04g33370.1",null,null,"Os01g0892800",1.322858,-1.0663403,null,"AMY3C","Amy3A/B/C*(RAmy3A/B/C), AmyII-6, AMY1.7, Amy3C, RAmy3A/B/C, Amy3A/B/C*, Amy7, AMY3B, RAmy3C, OsAmy3B","ALPHA-AMYLASE 3C","Alpha-amylase3C, Alpha-amylase isozyme 3C precursor, Alpha-amylase isozyme 3C, Amylase-7, Alpha-amylase-3A",9," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0009739 - response to gibberellin stimulus, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0004556 - alpha-amylase activity, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009408 - response to heat","TO:0000166 - gibberellic acid sensitivity, TO:0000259 - heat tolerance","PO:0007057 - 0 seed germination stage ","Os09g0457800","LOC_Os09g28420.1",null,"Os06g0726400","Os09g0522200",-1.3784245,0,null,"SK2(T)(SCL, FGR)","sk2(t)(scl, fgr), fgr, scl, BAD2, BADH2, sk2, OsBADH2, Badh2, badh2, Os2AP, BADH-2, OsALDH10A8, ALDH10A8","SCENTED KERNEL 2","scented kernel2, scented kernel 2, fragrance, betaine-aldehyde dehydrogenase 2, betaine aldehyde dehydrogenase 2, scented kernel-2, betaine aldehyde dehydrogenase-2, Aldehyde dehydrogenase 10A8",8," Biochemical character,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0005777 - peroxisome, GO:0008802 - betaine-aldehyde dehydrogenase activity, GO:0006950 - response to stress, GO:0009507 - chloroplast, GO:0009698 - phenylpropanoid metabolic process, GO:0031456 - glycine betaine biosynthetic process, GO:0009413 - response to flooding","TO:0000286 - submergence sensitivity, TO:0000087 - aroma","PO:0009011 - plant structure , PO:0000003 - whole plant , PO:0009010 - seed ","Os08g0424500","LOC_Os08g32870.1","Os09g0419500","Os10g0493600","Os03g0395000",2.4157012,2.5141485,null,"RSUS1","sus1, RSus1(t), SUS1, SS2, OsScS2, RSs2, RSus1, SuSy1, OsSUS1, RSS2, RSus2, OsRSUS1","SUCROSE SYNTHASE 1","sucrose synthase1, Sucrose synthase 1, Sucrose synthase 2, Sucrose-UDP glucosyltransferase 1, Sucrose synthase-2, rice SuSy gene 2, sucrose-UDP glucosyltransferase isozyme 2",3," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0006970 - response to osmotic stress, GO:0009413 - response to flooding, GO:0046686 - response to cadmium ion, GO:0009058 - biosynthetic process, GO:0051781 - positive regulation of cell division, GO:0005985 - sucrose metabolic process, GO:0009409 - response to cold, GO:0005886 - plasma membrane, GO:0016157 - sucrose synthase activity, GO:0010037 - response to carbon dioxide, GO:0005773 - vacuole","TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000449 - grain yield per plant",null,"Os03g0401300","LOC_Os03g28330.1, LOC_Os03g28330.2, LOC_Os03g28330.5, LOC_Os03g28330.4, LOC_Os03g28330.3"]
[{"$nulls":6},"Os07g0539100","LOC_Os07g35480",1.6647385,"Os01g0621900","LOC_Os01g43370",0,-1.0719166,{"$nulls":10},"Os01g0962700","Os04g0444100","Os01g0749300","Os01g0749300",-1.0989451,-1.2446251,null,"Os04g0625000",5.283609,"Os01g0326300",-1.8977785,{"$nulls":17},"Os05g0491200",1.8963717,1.044405,{"$nulls":9},"HAP3A","OsHAP3A, OsNF-YB-2, NFYB2, NF-YB2","HAP3A SUBUNIT OF CCAAT-BOX BINDING COMPLEX","rice HAP3A, Nuclear transcription factor Y subunit B-2, NUCLEAR FACTOR-Y subunit B2, NUCLEAR FACTOR-Y subunit NF-YB2, Transcriptional activator HAP3A, NF-YB subunit 2, NF-YB family 2",1," Vegetative organ - Leaf,  Other","GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription","TO:0002715 - chloroplast development trait",null,"Os01g0834400","LOC_Os01g61810.1, LOC_Os01g61810.2",null,null,"Os06g0270900","Os09g0570800",2.240189,0,null,"_",null,"_",null,7," Biochemical character,  Reproductive organ - panicle","GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0010229 - inflorescence development, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0635300     ","LOC_Os07g44130.1",null,null,"Os03g0818800",0,-1.0689335,null,"SSIIB","OsSSIIb, OsSSII-2, SSII-2, SS2, OsSSSIIb, SS2b","SOLUBLE STARCH SYNTHASE IIB","Starch synthase-IIb, starch synthase IIb, \\Soluble starch synthase 2-2, chloroplastic/amyloplastic\\\", Soluble starch synthase II-2, Starch synthase isoform zSTSII-2\"",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009011 - starch synthase activity, GO:0019252 - starch biosynthetic process, GO:0009651 - response to salt stress, GO:0009501 - amyloplast","TO:0006001 - salt tolerance, TO:0000488 - seed composition based quality trait","PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0009010 - seed ","Os02g0744700","LOC_Os02g51070.1",null,"Os04g0401300","Os06g0270900",-1.4823111,0,null,"XA","xa(t)*, Xa(t)","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE","Xanthomonas oryzae pv. oryzae resistance, Xanthomonas campestris pv. oryzae resistance",8," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os05g0104200","Os04g0567800","Os12g0115300",0,2.509622,null,"RSUS2","sus2, RSus2(t), SUS2, SS1, OsScS1, RSs1, RSus2, OsSUS2, RSS1, RSus1, OsSusy2, Susy2","SUCROSE SYNTHASE 2","sucrose synthase2, Sucrose synthase 2, Sucrose synthase 1, Sucrose-UDP glucosyltransferase 2, Sucrose synthase-1, rice SuSy gene 1, sucrose-UDP glucosyltransferase isozyme 1, sucrose synthase l, rice sucrose synthase-1",6," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046686 - response to cadmium ion, GO:0051781 - positive regulation of cell division, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0009555 - pollen development, GO:0005985 - sucrose metabolic process, GO:0009413 - response to flooding, GO:0006970 - response to osmotic stress, GO:0009058 - biosynthetic process, GO:0016157 - sucrose synthase activity, GO:0005773 - vacuole","TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000432 - temperature response trait, TO:0000396 - grain yield, TO:0000286 - submergence sensitivity, TO:0000592 - 1000-dehulled grain weight","PO:0001007 - pollen development stage ","Os06g0194900","LOC_Os06g09450.2, LOC_Os06g09450.8, LOC_Os06g09450.7, LOC_Os06g09450.6, LOC_Os06g09450.3, LOC_Os06g09450.1, LOC_Os06g09450.4, LOC_Os06g09450.5"]
[{"$nulls":6},"Os01g0343300","LOC_Os01g24070",1.6746718,"Os01g0636500","LOC_Os01g44970",0,1.3535758,{"$nulls":10},"Os06g0522300","Os06g0159900","Os02g0670700","Os02g0670700",1.1783543,1.5658927,null,"Os02g0152400",5.2765746,"Os01g0297200",-1.89193,{"$nulls":17},"Os11g0131900",2.1340487,1.9461266,{"$nulls":9},"CRY1A","OsCRY1a, OsCRY1, CRY1a, CRY2","CRYPTOCHROME 1A","cryptochrome 1a, Blue-light-receptor cryptochrome 1",2," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010075 - regulation of meristem growth, GO:0009882 - blue light photoreceptor activity, GO:0009785 - blue light signaling pathway, GO:0009881 - photoreceptor activity, GO:0007623 - circadian rhythm, GO:0006281 - DNA repair, GO:0009414 - response to water deprivation, GO:0009583 - detection of light stimulus, GO:0055114 - oxidation reduction, GO:0010118 - stomatal movement, GO:0009637 - response to blue light, GO:0010343 - singlet oxygen-mediated programmed cell death, GO:0010617 - circadian regulation of calcium ion oscillation, GO:0051510 - regulation of unidimensional cell growth, GO:0046777 - protein amino acid autophosphorylation, GO:0009640 - photomorphogenesis, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0005524 - ATP binding, GO:0046283 - anthocyanin metabolic process, GO:0003913 - DNA photolyase activity, GO:0004672 - protein kinase activity, GO:0010224 - response to UV-B","TO:0000159 - blue light sensitivity, TO:0002689 - leaf sheath length, TO:0000601 - UV-B light sensitivity, TO:0002675 - gibberellic acid content",null,"Os02g0573200","LOC_Os02g36380.1, LOC_Os02g36380.2",null,null,"Os08g0120000","Os05g0159300",2.2393348,0,null,"_",null,"_",null,1," Biochemical character,  Reproductive organ - panicle","GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0010229 - inflorescence development, GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0005506 - iron ion binding, GO:0020037 - heme binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0227800      ","LOC_Os01g12770.1",null,null,"Os05g0145400",0,-1.1132355,null,"SSIIC","OsSSIIc, SSII-1, SSII1","SOLUBLE STARCH SYNTHASE IIC","\\Soluble starch synthase 2-1, chloroplastic/amyloplastic\\\", Soluble starch synthase II-1\"",10," Seed - Physiological traits - Storage substances","GO:0019252 - starch biosynthetic process, GO:0009011 - starch synthase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast",null,"PO:0025034 - leaf , PO:0009089 - endosperm ","Os10g0437600","LOC_Os10g30156.1",null,"Os12g0268000","Os06g0658900",-1.5231868,0,null,"XA13","xa13, Xa13, Os8N3, Os-8N3, 8N3, OsSWEET11, SWEET11, OsSWEET11/Xa13, Xa13/Os8N3/SWEET11, Os8N3/Xa13, OsSWEET11/Os8N3","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13","Xanthomonas oryzae pv. oryzae resistance 13, Xanthomonas campestris pv. oryzae resistance-13, Xanthomonas oryzae pv. oryzae resistance-13",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0002237 - response to molecule of bacterial origin, GO:0034219 - carbohydrate transmembrane transport, GO:0015770 - sucrose transport, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0005887 - integral to plasma membrane, GO:0005515 - protein binding, GO:0009915 - phloem loading, GO:0006825 - copper ion transport, GO:0006952 - defense response, GO:0051119 - sugar transmembrane transporter activity, GO:0008515 - sucrose transmembrane transporter activity, GO:0010431 - seed maturation, GO:0009960 - endosperm development, GO:0005886 - plasma membrane, GO:0009617 - response to bacterium, GO:0010150 - leaf senescence","TO:0006001 - salt tolerance, TO:0002661 - seed maturation, TO:0000575 - endosperm related trait, TO:0000060 - aborted uni-nucleate stage, TO:0000371 - yield trait, TO:0000249 - leaf senescence, TO:0000540 - leaf area, TO:0000180 - spikelet fertility, TO:0000696 - starch content, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage , PO:0005360 - aleurone layer , PO:0008006 - nucellar epidermis , PO:0008007 - nucellar projection , PO:0020020 - nucellus , PO:0007632 - seed maturation stage , PO:0020128 - leaf margin , PO:0020137 - leaf apex ","Os08g0535200","LOC_Os08g42350.1","Os09g0380200","Os11g0169200","Os05g0382900",0,2.4894917,null,"RSUS3","RSus3(t), SUS3, SS3, OsScS3, RSs3, RSus3, OsSUS3, RSS3, OsEnS-111, Susy3, OsSusy3","SUCROSE SYNTHASE 3","Rice sucrose synthase-3(t), Sucrose synthase 3, Sucrose-UDP glucosyltransferase 3, Sucrose synthase-3, rice SuSy gene 3, endosperm-specific gene 111",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0030244 - cellulose biosynthetic process, GO:0009555 - pollen development, GO:0010581 - regulation of starch biosynthetic process, GO:0009960 - endosperm development, GO:0010410 - hemicellulose metabolic process, GO:0052324 - cell wall cellulose biosynthetic process, GO:0005773 - vacuole, GO:0046686 - response to cadmium ion, GO:0051321 - meiotic cell cycle, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress, GO:0010229 - inflorescence development, GO:0009409 - response to cold, GO:0009413 - response to flooding, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process, GO:0048316 - seed development, GO:0009723 - response to ethylene stimulus, GO:0009873 - ethylene mediated signaling pathway, GO:0016157 - sucrose synthase activity","TO:0000173 - ethylene sensitivity, TO:0000575 - endosperm related trait, TO:0000457 - total biomass yield, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000391 - seed size, TO:0000592 - 1000-dehulled grain weight, TO:0000449 - grain yield per plant, TO:0000734 - grain length, TO:0000068 - lodging incidence, TO:0000696 - starch content, TO:0000396 - grain yield, TO:0000114 - flooding related trait, TO:0000590 - grain weight","PO:0001007 - pollen development stage , PO:0009089 - endosperm , PO:0007633 - endosperm development stage , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os07g0616800","LOC_Os07g42490.2, LOC_Os07g42490.1"]
[{"$nulls":6},"Os10g0371100","LOC_Os10g22600",1.6778313,"Os01g0652100","LOC_Os01g46350",0,2.927578,{"$nulls":10},"Os10g0109300","Os07g0408100","Os03g0844000","Os03g0844000",2.7068872,2.7728684,null,"Os08g0547500",5.26353,"Os05g0197300",-1.891696,{"$nulls":17},"Os06g0561000",1.6449728,4.2721057,{"$nulls":9},"CRY1B","OsCRY1b, OsCRY2, CRY1b, CRY1","CRYPTOCHROME 1B","cryptochrome 1b, Blue-light-receptor cryptochrome 2",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0046777 - protein amino acid autophosphorylation, GO:0005524 - ATP binding, GO:0009785 - blue light signaling pathway, GO:0004672 - protein kinase activity, GO:0003913 - DNA photolyase activity, GO:0051510 - regulation of unidimensional cell growth, GO:0009640 - photomorphogenesis, GO:0009740 - gibberellic acid mediated signaling, GO:0055114 - oxidation reduction, GO:0006281 - DNA repair, GO:0009882 - blue light photoreceptor activity, GO:0010343 - singlet oxygen-mediated programmed cell death, GO:0010075 - regulation of meristem growth, GO:0010617 - circadian regulation of calcium ion oscillation, GO:0009414 - response to water deprivation, GO:0010118 - stomatal movement, GO:0005634 - nucleus, GO:0046283 - anthocyanin metabolic process, GO:0009583 - detection of light stimulus, GO:0007623 - circadian rhythm, GO:0009637 - response to blue light","TO:0002689 - leaf sheath length, TO:0002675 - gibberellic acid content, TO:0000159 - blue light sensitivity",null,"Os04g0452100","LOC_Os04g37920.6, LOC_Os04g37920.4, LOC_Os04g37920.1, LOC_Os04g37920.3",null,null,"Os06g0658900","Os09g0459200",2.2374077,0,null,"_",null,"_",null,11," Biochemical character,  Reproductive organ - panicle","GO:0016021 - integral to membrane, GO:0010268 - brassinosteroid homeostasis, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0007275 - multicellular organismal development, GO:0055114 - oxidation reduction, GO:0016125 - sterol metabolic process, GO:0016132 - brassinosteroid biosynthetic process, GO:0010229 - inflorescence development, GO:0005506 - iron ion binding, GO:0020037 - heme binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os11g0289700       ","LOC_Os11g18570.1",null,null,"Os07g0262200",0,-1.1710991,null,"SSIIIB","OsSSIIIb. SSIII-1, SSIIIa","SOLUBLE STARCH SYNTHASE IIIB",null,4," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0019252 - starch biosynthetic process, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0009011 - starch synthase activity, GO:0009408 - response to heat","TO:0000621 - inflorescence development trait, TO:0000259 - heat tolerance","PO:0009010 - seed , PO:0025034 - leaf , PO:0009089 - endosperm , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage ","Os04g0624600","LOC_Os04g53310.1",null,"Os09g0473400","Os03g0208500",-1.5386328,0,null,"PI11","Pi11(t)*(Pi zh), Pi11(t)*, Pizh, Pi-zh, Pi-zh*, Pi-zh(t), Pi-11(t), Pi-11, Pi11","PYRICULARIA ORYZAE RESISTANCE 11","Pyricularia oryzae resistance 11, Magnaporthe grisea resistance zh, Blast resistance 11",8," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000484 - seed shape","PO:0009025 - vascular leaf ",null,null,"Os02g0673700","Os01g0113200","Os10g0496900",0,2.4886959,null,"NAC5","OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009","NAC DOMAIN-CONTAINING PROTEIN 5","NAC 5, NAC domain-containing protein 71, ONNAC GENE 5, OsNAC gene-5, NAC domain-containing protein 9, NAC domain-containing protein 20, OnNAC gene-5",11," Biochemical character,  Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0045449 - regulation of transcription, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0003677 - DNA binding, GO:0010150 - leaf senescence, GO:0006350 - transcription, GO:0004812 - aminoacyl-tRNA ligase activity, GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000731 - lignin content, TO:0000043 - root anatomy and morphology trait, TO:0000303 - cold tolerance, TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity, TO:0000153 - relative yield, TO:0000396 - grain yield, TO:0000276 - drought tolerance, TO:0002661 - seed maturation","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os11g0184900","LOC_Os11g08210.1"]
[{"$nulls":6},"Os01g0753500","LOC_Os01g54990",1.6797137,"Os01g0668100","LOC_Os01g47780",0,3.9767025,{"$nulls":10},"Os12g0530100","Os03g0820400","Os11g0114150","Os11g0114150",3.184474,2.5206258,null,"Os09g0264400",5.26255,"Os03g0189400",-1.8898478,{"$nulls":17},"Os01g0917400",0,1.7494059,{"$nulls":9},"CRY2","OsCRY2","CRYPTOCHROME 2","cryptochrome 2",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006281 - DNA repair, GO:0010224 - response to UV-B, GO:0003913 - DNA photolyase activity, GO:0009881 - photoreceptor activity, GO:0009648 - photoperiodism, GO:0009908 - flower development, GO:0009740 - gibberellic acid mediated signaling, GO:0051510 - regulation of unidimensional cell growth, GO:0009785 - blue light signaling pathway","TO:0002689 - leaf sheath length, TO:0002675 - gibberellic acid content, TO:0000159 - blue light sensitivity, TO:0000601 - UV-B light sensitivity","PO:0007615 - flower development stage ","Os02g0625000","LOC_Os02g41550.1, LOC_Os02g41550.2, LOC_Os02g41550.3, LOC_Os02g41550.4",null,null,"Os12g0507200","Os03g0122300",2.235305,0,null,"_",null,"_",null,10," Biochemical character,  Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0486100        ","LOC_Os10g34480.1",null,null,"Os08g0189900",0,-1.2424258,null,"SSIVA","OsSSIVa, SSIV-1, OsSSIV-1","SOLUBLE STARCH SYNTHASE IVA","SOLUBLE STARCH SYNTHASE IV-1",1," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0019252 - starch biosynthetic process, GO:0009250 - glucan biosynthetic process, GO:0009011 - starch synthase activity","TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0001083 - inflorescence development stage ","Os01g0720600 ","LOC_Os01g52250.1, LOC_Os01g52250.2, LOC_Os01g52250.6, LOC_Os01g52250.5, LOC_Os01g52250.4, LOC_Os01g52250.3",null,"Os11g0199200","Os03g0839900",-1.5584296,0,null,"ADH2","Adh2*, Adh2, OsADH2","ALCOHOL DEHYDROGENASE 2","Alcohol dehydrogenase2, Alcohol dehydrogenase 2, Alcohol dehydrogenase-2",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0001666 - response to hypoxia, GO:0055114 - oxidation reduction, GO:0008270 - zinc ion binding, GO:0005737 - cytoplasm, GO:0009873 - ethylene mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0009413 - response to flooding, GO:0018468 - alcohol dehydrogenase (acceptor) activity, GO:0004022 - alcohol dehydrogenase (NAD) activity","TO:0000173 - ethylene sensitivity, TO:0000114 - flooding related trait",null,"Os11g0210500","LOC_Os11g10510.2, LOC_Os11g10510.1","Os01g0670800","Os09g0419500","Os01g0124401",0,2.4845889,null,"AMT1;3","OsAMT1;3, AMT1-3, Osamt1-2, \\OsAMT1, 2\\\", OsAMT1;2, OsAMT1.3, AMT1.2\"","AMMONIUM TRANSPORTER-1; 3","ammonium transporter-1;3, ammonium transporter 1;3, Ammonium transporter 1 member 3, ammonium transporter 1-2, \\NH4+ transporter 1, 2\\\", Ammonium transporter 1;2\"",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0009413 - response to flooding, GO:0019740 - nitrogen utilization, GO:0042128 - nitrate assimilation, GO:0042594 - response to starvation, GO:0008519 - ammonium transmembrane transporter activity, GO:0015696 - ammonium transport, GO:0010157 - response to chlorate, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0005886 - plasma membrane, GO:0051258 - protein polymerization, GO:0009624 - response to nematode, GO:0005634 - nucleus, GO:0015398 - high affinity secondary active ammonium transmembrane transporter activity, GO:0009737 - response to abscisic acid stimulus, GO:0015843 - methylammonium transport","TO:0000598 - protein content, TO:0000114 - flooding related trait, TO:0000396 - grain yield","PO:0009005 - root , PO:0025034 - leaf ","Os02g0620500","LOC_Os02g40710.1"]
[{"$nulls":6},"Os03g0198600","LOC_Os03g10210",1.6825858,"Os01g0701700","LOC_Os01g50610",0,-2.0907042,{"$nulls":10},"Os05g0527000","Os06g0474800","Os07g0636900","Os07g0636900",-2.4468281,-1.0778502,null,"Os01g0672100",5.2550783,"Os08g0163300",-1.889485,{"$nulls":17},"Os01g0343300",2.8214571,1.6746718,{"$nulls":9},"SPX2","OsSPX2","SPX DOMAIN PROTEIN 2","SPX (SYG/PHO81/XPR1) domain gene 2, SPX domain protein 2",2," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0080040 - positive regulation of cellular response to phosphate starvation, GO:0016036 - cellular response to phosphate starvation, GO:0005634 - nucleus, GO:0070417 - cellular response to cold, GO:0042594 - response to starvation, GO:0010167 - response to nitrate","TO:0000102 - phosphorus sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle",null,"Os02g0202200","LOC_Os02g10780.1",null,null,"Os02g0817700","Os05g0563400",2.2042835,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",1," Reproductive organ - panicle","GO:0009451 - RNA modification, GO:0010229 - inflorescence development, GO:0008270 - zinc ion binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0589900","LOC_Os01g40720.1",null,null,"Os09g0533600",1.278048,-1.25211,null,"SSIVB","OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2","SOLUBLE STARCH SYNTHASE IVB","SOLUBLE STARCH SYNTHASE IV-2",5," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009011 - starch synthase activity, GO:0009507 - chloroplast, GO:0009960 - endosperm development, GO:0019252 - starch biosynthetic process, GO:0005978 - glycogen biosynthetic process, GO:0009501 - amyloplast",null,"PO:0025034 - leaf , PO:0007633 - endosperm development stage , PO:0009089 - endosperm ","Os05g0533600","LOC_Os05g45720.4, LOC_Os05g45720.3, LOC_Os05g45720.2, LOC_Os05g45720.1",null,"Os07g0107800","Os02g0745100",-1.5785723,0,null,"BPH","Bph(t)*, Bph11","BROWN PLANTHOPPER RESISTANCE","brown planthopper resistance, Brown planthopper resistance, Brown planthopper resistance-11",9," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009005 - root ",null,null,"Os06g0571800","Os01g0633100","Os12g0115500",0,2.480174,null,"HD2","Hd2(t), Hd2, qHD2(t), OsPRR37, Os-PRR37, PRR37, Prr4, OsPRR4, DTH7, OsCCT28, CCT28, Ghd7.1, PRR37/Hd2, EH7-2, EH7-2/Hd2, Hd2/PRR37, PRR37-1a, PRR37-1b, PRR37-1c, PRR37-2a, PRR37- 2, HD7.2","Heading date 2","Heading date (QTL)-2(t), Heading date 2, PSEUDO-RESPONSE REGULATOR 37, PSEUDO RESPONSE REGULATOR 37, pseudo-response regulator 4, Days to heading 7, Days to heading on chromosome 7, CCT domain-containing gene 28, CCT (CO, CO-LIKE and TOC1) domain protein 28, CCT domain protein 28, \\grain number, plant height and heading date 7.1\\\", Early heading7-2, Heading date 7.2\"",7," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048511 - rhythmic process, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0000156 - two-component response regulator activity, GO:0007623 - circadian rhythm, GO:0048573 - photoperiodism, flowering, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000229 - photoperiod sensitivity, TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000137 - days to heading",null,"Os07g0695100","LOC_Os07g49460.1, LOC_Os07g49460.4, LOC_Os07g49460.3, LOC_Os07g49460.2"]
[{"$nulls":6},"Os03g0782500","LOC_Os03g56950",1.688983,"Os01g0701900","LOC_Os01g50616",0,1.1218387,{"$nulls":10},"Os01g0597800","Os04g0405800","Os02g0697500","Os02g0697500",1.8175578,1.1643367,null,"Os01g0266400",5.254554,"Os03g0646800",-1.8766861,{"$nulls":17},"Os04g0269600",-2.9795387,2.4455447,{"$nulls":9},"SDG725","OsSDG725, OsSET8, ASHH2","SET DOMAIN GROUP PROTEIN 725","SET Domain Group Protein725, SET DOMAIN GROUP725, SET protein 8, \\ABSENT, SMALL, OR HOMEOTIC DISCS 1 HOMOLOG 2\\\"\"",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018024 - histone-lysine N-methyltransferase activity, GO:0005634 - nucleus, GO:0034968 - histone lysine methylation, GO:2000028 - regulation of photoperiodism, flowering, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0009742 - brassinosteroid mediated signaling, GO:0009908 - flower development, GO:0008270 - zinc ion binding","TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0002616 - flowering time, TO:0000391 - seed size, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0000456 - spikelet number","PO:0007615 - flower development stage ","Os02g0554000","LOC_Os02g34850.1",null,null,"Os02g0745100","Os07g0593000",2.202812,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",8," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0008270 - zinc ion binding, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os08g0402600","LOC_Os08g31110.1",null,null,"Os11g0667700",0,-1.307413,null,"SBE4","RBE4, OsSBE4, BEIIa, QEIIb, BEIIA, OsBEIIa","STARCH BRANCHING ENZYME 4","Q-enzyme IIb, starch branching enzyme IIb, Starch branching enzyme IIa",4," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process, GO:0005982 - starch metabolic process, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0003844 - 1,4-alpha-glucan branching enzyme activity, GO:0009501 - amyloplast, GO:0019252 - starch biosynthetic process","TO:0000489 - carbohydrate composition related trait, TO:0000097 - amylopectin content, TO:0000099 - sugary endosperm, TO:0000162 - seed quality, TO:0000399 - grain thickness, TO:0000734 - grain length","PO:0025034 - leaf ","Os04g0409200","LOC_Os04g33460.1",null,"Os01g0114100","Os08g0174700",-1.6404195,0,null,"GM","gm1, gm2(pd), pd, gm13","GALL MIDGE RESISTANCE ","gall midge resistance, gall midge resistance-13",9," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os12g0197500","Os05g0481000","Os02g0204400",0,2.474655,null,"qYD-7-1 (yd7a)","qYD-7-1 (yd7a)","yield (QTL)-7-1","yield (QTL)-7-1",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0583200","LOC_Os04g49370",1.7046095,"Os01g0706700","LOC_Os01g51040",0,1.7048115,{"$nulls":10},"Os07g0489200","Os07g0513200","Os12g0113900","Os12g0113900",4.251044,2.575023,null,"Os11g0702200",5.245071,"Os10g0491000",-1.8751928,{"$nulls":17},"Os05g0405000",0,1.3920685,{"$nulls":9},"HAG703","OsHAG703, OsELP3, ELP3","HISTONE ACETYLTRANSFERASE HAG703","Histone acetyltransferase HAG703",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding, GO:0051536 - iron-sulfur cluster binding, GO:0009294 - DNA mediated transformation, GO:0008283 - cell proliferation, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048366 - leaf development, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0004402 - histone acetyltransferase activity, GO:0035265 - organ growth, GO:0016573 - histone acetylation","TO:0000615 - abscisic acid sensitivity, TO:0000655 - leaf development trait, TO:0002681 - leaf curling, TO:0000370 - leaf width, TO:0000276 - drought tolerance","PO:0001050 - leaf development stage ","Os04g0484900","LOC_Os04g40840.1",null,null,"Os04g0614600","Os03g0680800",2.1520936,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",7," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0009451 - RNA modification","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0244400 ","LOC_Os07g14100.1",null,null,"Os06g0187200",0,-1.344282,null,"GIF1","gif1, CIN2, OsCIN2, OsGIF1, WB1, OsWB1, GIF1/OsCIN2","GRAIN  INCOMPLETE FILLING 1","grain incomplete filling 1, \\Beta-fructofuranosidase, insoluble isoenzyme 2\\\", Sucrose hydrolase 2, Invertase 2, Cell wall beta-fructosidase 2, cell-wall invertase 2, White Belly 1\"",4," Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste,  Character as QTL - Yield and productivity","GO:0009960 - endosperm development, GO:0016787 - hydrolase activity, GO:0005987 - sucrose catabolic process, GO:0005975 - carbohydrate metabolic process, GO:0005618 - cell wall, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005986 - sucrose biosynthetic process, GO:0048046 - apoplast, GO:0004575 - sucrose alpha-glucosidase activity, GO:0004564 - beta-fructofuranosidase activity","TO:0000304 - seed thickness, TO:0000456 - spikelet number, TO:0000447 - filled grain number, TO:0000328 - sucrose content, TO:0002661 - seed maturation, TO:0000391 - seed size, TO:0000300 - glucose content, TO:0000311 - invertase activity, TO:0000196 - amylose content, TO:0000455 - seed set percent, TO:0000590 - grain weight, TO:0000097 - amylopectin content, TO:0006005 - fructose content, TO:0000221 - glume color, TO:0002656 - starch grain shape, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000396 - grain yield, TO:0000487 - endosperm color, TO:0000575 - endosperm related trait, TO:0000266 - chalky endosperm, TO:0000696 - starch content, TO:0000592 - 1000-dehulled grain weight, TO:0000162 - seed quality","PO:0000025 - root tip , PO:0005019 - carpel vascular system , PO:0006326 - inflorescence internode , PO:0009084 - pericarp , PO:0009089 - endosperm , PO:0007633 - endosperm development stage ","Os04g0413500","LOC_Os04g33740.1",null,"Os07g0412100","Os02g0140300",-1.6587092,0,null,"HSP2*","hsp2*, hsp2","HEAT SHOCK PROTEIN2","heat shock protein2, heat shock protein 2, heat shock protein-2",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003773 - heat shock protein activity, GO:0042026 - protein refolding","TO:0000432 - temperature response trait, TO:0000259 - heat tolerance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os03g0235700","Os05g0104200","Os04g0459000",0,2.4731069,null,"qYD-8 (yd8)","qYD-8 (yd8)","yield (QTL)-8","yield (QTL)-8",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0706700","LOC_Os01g51040",1.7048115,"Os01g0715400","LOC_Os01g51754",0,1.0224143,{"$nulls":10},"Os01g0176000","Os04g0567800","Os01g0193900","Os01g0193900",-2.4264348,-1.6069416,null,"Os08g0238200",5.243205,"Os04g0650800",-1.8694534,{"$nulls":17},"Os01g0225600",0,1.7882758,{"$nulls":9},"ICL","OsEnS-107, EnS-107, OsI85, I85, OsICL, Osl85, l43, Osl43, OsL85","ISOCITRATE LYASE","isocitrate lyase, endosperm-specific gene 107",7," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0004451 - isocitrate lyase activity, GO:0019752 - carboxylic acid metabolic process, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010150 - leaf senescence, GO:0009413 - response to flooding","TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance","PO:0001054 - 4 leaf senescence stage ","Os07g0529000","LOC_Os07g34520.3, LOC_Os07g34520.2, LOC_Os07g34520.1",null,null,"Os02g0570400","Os02g0743400",2.1346276,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",3," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0363700 ","LOC_Os03g24880.1",null,null,"Os03g0172000",-1.591598,-1.3587781,null,"PT4","OsPT4, PHT1-4, OsPht1;4, PHT1-2, PHT1;4, OsPHT1;4","PHOSPHATE TRANSPORTER 4","Probable inorganic phosphate transporter 1-4, Plant Phosphate Transporter 1;4",4," Biochemical character,  Seed - Morphological traits - Embryo,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0016020 - membrane, GO:0055085 - transmembrane transport, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0009739 - response to gibberellin stimulus, GO:0046688 - response to copper ion, GO:0009790 - embryonic development, GO:0009733 - response to auxin stimulus, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0006817 - phosphate transport, GO:0009845 - seed germination, GO:0016036 - cellular response to phosphate starvation, GO:0015293 - symporter activity, GO:0009735 - response to cytokinin stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000021 - copper sensitivity, TO:0000102 - phosphorus sensitivity","PO:0007631 - plant embryo stage , PO:0009009 - plant embryo , PO:0020103 - flag leaf , PO:0007057 - 0 seed germination stage ","Os04g0186400","LOC_Os04g10750.4, LOC_Os04g10750.3, LOC_Os04g10750.2, LOC_Os04g10750.1",null,"Os02g0823100","Os04g0106300",-1.8234681,0,null,"HSP4*","hsp4*, hsp4","HEAT SHOCK PROTEIN4","heat shock protein4, heat shock protein 4, heat shock protein-4",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0042026 - protein refolding, GO:0003773 - heat shock protein activity","TO:0000259 - heat tolerance, TO:0000432 - temperature response trait","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os02g0580800","Os09g0380200","Os12g0113500",2.9253447,2.4671364,null,"qYD-6 (yd6)","qYD-6 (yd6)","yield (QTL)-6","yield (QTL)-6",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0128200","LOC_Os02g03580",1.7083406,"Os01g0720400","LOC_Os01g52230",0,-1.3515873,{"$nulls":10},"Os01g0176200","Os02g0673700","Os03g0859900","Os03g0859900",5.768721,3.5007906,null,"Os10g0504600",5.24136,"Os12g0552300",-1.8654522,{"$nulls":17},"Os09g0361500",3.678552,3.756293,{"$nulls":9},"PAP26","OsPAP26","PURPLE ACID PHOSPHATASE 26","purple acid phosphatase 26",6," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0055062 - phosphate ion homeostasis, GO:0046872 - metal ion binding, GO:0010150 - leaf senescence, GO:0003993 - acid phosphatase activity, GO:0006817 - phosphate transport, GO:0042594 - response to starvation, GO:0009505 - plant-type cell wall, GO:0005773 - vacuole","TO:0000249 - leaf senescence, TO:0002661 - seed maturation","PO:0001054 - 4 leaf senescence stage ","Os06g0643900","LOC_Os06g43640.2, LOC_Os06g43640.1",null,null,"Os02g0274100","Os04g0659300",2.0896952,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",12," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0009451 - RNA modification, GO:0008270 - zinc ion binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os12g0552300  ","LOC_Os12g36620.1",null,null,"Os03g0643300",-2.851637,-1.3771795,null,"GLP1","OsGLP1, GER1, GER5, GLP110, OsGER1, OsGER5, OsGLP8-14, GLP8-14","GERMIN-LIKE PROTEIN 1","Germin-like protein 8-14, Germin-like protein 5, Germin-like protein 1, Germin protein type 1, germin-like protein1",8," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0010229 - inflorescence development","TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020104 - leaf sheath ","Os08g0460000","LOC_Os08g35760.1",null,"Os01g0601000","Os07g0175100",-1.831513,0,null,"SUB1","Sub1, Sub1(Sub1A,Sub1B,Sub1C), Sub1A, Sub1B, Sub1C, Sub1","SUBMERGENCE TOLERANCE 1","Submergence tolerance1, Submergence tolerance 1, Submergence tolerance-1",9," Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0003677 - DNA binding","TO:0000103 - deepwater stress, TO:0000207 - plant height, TO:0000286 - submergence sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os09g0533600","Os06g0498400","Os01g0798500",0,2.4597769,null,"qYD-7-2 (yd7b)","qYD-7-2 (yd7b)","yield (QTL)-7-2","yield (QTL)-7-2",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0555000","LOC_Os04g46860",1.7134777,"Os01g0757500","LOC_Os01g55270",0,-1.2921511,{"$nulls":10},"Os01g0201100","Os04g0620700","Os02g0153000","Os02g0153000",2.293679,2.51517,null,"Os07g0157600",5.2276287,"osa-miR416",-1.8653711,{"$nulls":17},"Os12g0572000",0,3.1233323,{"$nulls":9},"Y37","NAC11, ONAC011, ONAC11, OMTN4, OsY37, OsY37N, OsY37I, OsNAC1, DLN172, OsDLN172","YELLOW 37","NAC domain-containing protein 011, NAC domain-containing protein 11, miR164-targeted NAC4, Oryza miR164-targeted NAC4, Yellow37, Yellow 37, DLN repressor 172, DLN motif protein 172",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009651 - response to salt stress, GO:0010942 - positive regulation of cell death, GO:0055072 - iron ion homeostasis, GO:0003677 - DNA binding, GO:0048573 - photoperiodism, flowering, GO:0010150 - leaf senescence, GO:0006995 - cellular response to nitrogen starvation, GO:0006355 - regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance, TO:0000495 - chlorophyll content, TO:0000224 - iron sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000326 - leaf color, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0009005 - root ","Os06g0675600","LOC_Os06g46270.1",null,null,"Os08g0174700","Os09g0439800",2.0700114,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",2," Reproductive organ - panicle","GO:0009507 - chloroplast, GO:0008380 - RNA splicing, GO:0006417 - regulation of translation, GO:0006397 - mRNA processing, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0750400   ","LOC_Os02g51480.1",null,null,"Os04g0683700",0,-1.505579,null,"GLP12-1","OsGLP12-1","GERMIN-LIKE PROTEIN 12-1","Germin-like protein 12-1",12," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0048046 - apoplast, GO:0045735 - nutrient reservoir activity, GO:0050832 - defense response to fungus, GO:0030145 - manganese ion binding","TO:0000074 - blast disease",null,"Os12g0154700","LOC_Os12g05840.1",null,"Os02g0106100","Os01g0159800",-1.8455215,0,null,"BPH3","Bph3","BROWN PLANTHOPPER RESISTANCE 3","brown planthopper resistance 3, Brown planthopper resistance-3",6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os04g0416400","Os02g0673700","Os07g0686600",2.438549,2.4509923,null,"qTP-1 (tp1)","qTP-1 (tp1)","tillers per plant (QTL)-1","tillers per plant (QTL)-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0101700","LOC_Os08g01140",1.7257352,"Os01g0846800","LOC_Os01g62810",0,-1.3124882,{"$nulls":10},"Os06g0187500","Os12g0515500","Os01g0675800","Os01g0675800",-2.1810002,-1.7036854,null,"Os04g0600900",5.221672,"Os10g0573800",-1.8643912,{"$nulls":17},"Os03g0129300",2.203059,3.3167012,{"$nulls":9},"NAC62","ONAC062, ONAC62, OsSND2, SND2","NAC DOMAIN-CONTAINING PROTEIN 62","NAC domain-containing protein 062, NAC domain-containing protein 62, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN2, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2",5," Vegetative organ - Leaf,  Other","GO:0009834 - secondary cell wall biogenesis, GO:0003677 - DNA binding, GO:0030244 - cellulose biosynthetic process, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent",null,"PO:0020142 - stem internode ","Os05g0563000 ","LOC_Os05g48850.1",null,null,"Os02g0140300","Os08g0441500",2.016576,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",8," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0009451 - RNA modification","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os08g0340900    ","LOC_Os08g25280.1",null,null,"Os01g0114300",-1.6340421,-1.5384606,null,"GLP12-2","OsGLP12-2","GERMIN-LIKE PROTEIN 12-2","Germin-like protein 12-2",12," Seed - Physiological traits - Storage substances","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast",null,null,"Os12g0154800","LOC_Os12g05860.1",null,"Os03g0215400","Os01g0103800",-1.854517,0,null,"BPH4","bph4","BROWN PLANTHOPPER RESISTANCE 4","brown planthopper resistance 4, brown planthopper resistance-4",6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os03g0273800","Os01g0670800","Os03g0267300",0,2.447728,null,"qTP-7-1 (tp7a)","qTP-7-1 (tp7a)","tillers per plant (QTL)-7-1","tillers per plant (QTL)-7-1",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0305900","LOC_Os01g19970",1.7271547,"Os01g0850700","LOC_Os01g63190",0,6.7043138,{"$nulls":10},"Os04g0556500","Os09g0447000","Os02g0747400","Os02g0747400",4.3927207,3.0791883,null,"Os02g0767800",5.2201934,"Os01g0864500",-1.860396,{"$nulls":17},"Os10g0370500",1.9080826,1.3736,{"$nulls":9},"TAR1","OsTAR1, FBL","TRYPTOPHAN AMINOTRANSFERASE 1","Trp aminotransferase 1, FIBLIKE, FIB LIKE, TRYPTOPHAN AMINOTRANSFERASE RELATED 1",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0016846 - carbon-sulfur lyase activity, GO:0010588 - cotyledon vascular tissue pattern formation, GO:0080098 - L-tyrosine:pyruvate aminotransferase activity, GO:0004838 - L-tyrosine:2-oxoglutarate aminotransferase activity, GO:0048825 - cotyledon development, GO:0048366 - leaf development, GO:0080097 - L-tryptophan:pyruvate aminotransferase activity, GO:0010078 - maintenance of root meristem identity, GO:0010087 - phloem or xylem histogenesis, GO:0048467 - gynoecium development, GO:0009684 - indoleacetic acid biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0030170 - pyridoxal phosphate binding, GO:0080022 - primary root development, GO:0009723 - response to ethylene stimulus, GO:0009641 - shade avoidance, GO:0005737 - cytoplasm, GO:0004021 - L-alanine:2-oxoglutarate aminotransferase activity, GO:0080100 - L-glutamine:2-oxoglutarate aminotransferase activity, GO:0009734 - auxin mediated signaling pathway, GO:0050362 - L-tryptophan:2-oxoglutarate aminotransferase activity, GO:0047312 - L-phenylalanine:pyruvate aminotransferase activity, GO:0080130 - L-phenylalanine:2-oxoglutarate aminotransferase activity, GO:0080099 - L-methionine:2-oxoglutarate aminotransferase activity, GO:0050048 - L-leucine:2-oxoglutarate aminotransferase activity, GO:0009958 - positive gravitropism","TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0002681 - leaf curling",null,"Os05g0169300","LOC_Os05g07720.1",null,null,"Os01g0889400","Os06g0595900",2.000423,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",10," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0116000     ","LOC_Os10g02650.1",null,null,"Os04g0573900",-1.9732274,-1.538496,null,"GLP12-3","OsGLP12-3","GERMIN-LIKE PROTEIN 12-3",null,12," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0048046 - apoplast",null,null,"Os12g0154900","LOC_Os12g05870.1",null,"Os02g0783700","Os02g0807100",-1.9080248,0,null,"GLH3","Glh3","GREEN LEAFHOPPER RESISTANCE 3","Green leafhopper resistance3, Green leafhopper resistance 3, Green leafhopper resistance-3",10," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os02g0125700","Os06g0571800","Os04g0269600",-2.9795387,2.4455447,null,"qTP-7-2 (tp7b)","qTP-7-2 (tp7b)","tillers per plant (QTL)-7-2","tillers per plant (QTL)-7-2",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0145800","LOC_Os06g05350",1.7282958,"Os01g0859400","LOC_Os01g64010",0,1.130426,{"$nulls":10},"Os04g0636100","Os04g0616700","Os02g0648300","Os02g0648300",2.0378513,3.4605591,null,"Os03g0817800",5.2190604,"Os01g0246700",-1.8576914,{"$nulls":17},"Os09g0537700",0,3.1804707,{"$nulls":9},"DDF1","OsDDF1","DWARF AND DEFORMED FLOWER 1","Dwarf and deformed flower 1, dwarf and deformed flower 1-1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051302 - regulation of cell division, GO:0001558 - regulation of cell growth, GO:0005730 - nucleolus, GO:0010093 - specification of floral organ identity","TO:0000145 - internode length, TO:0000135 - leaf length, TO:0000258 - leaf thickness, TO:0000227 - root length, TO:0006009 - lodicule anatomy and morphology trait, TO:0006032 - panicle size, TO:0000557 - secondary branch number, TO:0000472 - vascular bundle number, TO:0002692 - root meristem development, TO:0000470 - vascular tissue related trait, TO:0000576 - stem length, TO:0000339 - stem thickness, TO:0000223 - pistil anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait, TO:0000437 - male sterility, TO:0000614 - lemma shape, TO:0006020 - shoot apical meristem development, TO:0000306 - root thickness, TO:0000040 - panicle length, TO:0000547 - primary branch number",null,"Os06g0139000","LOC_Os06g04710.1",null,null,"Os03g0737200","Os01g0495900",1.9984254,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",11," Reproductive organ - panicle","GO:0009451 - RNA modification, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os11g0433101      ","LOC_Os11g24530.1",null,null,"Os04g0490500",0,-1.5664234,null,"GLP8-11","OsGLP8-11, RGLP1, OsRGLP1","GERMIN-LIKE PROTEIN 8-11","Germin-like protein 8-11",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048046 - apoplast, GO:0009723 - response to ethylene stimulus, GO:0009651 - response to salt stress, GO:0030912 - response to deep water, GO:0002242 - defense response to parasitic plant, GO:0030145 - manganese ion binding, GO:0050832 - defense response to fungus, GO:0005618 - cell wall, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009414 - response to water deprivation, GO:0045735 - nutrient reservoir activity","TO:0000444 - parasitic weed, TO:0000173 - ethylene sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000286 - submergence sensitivity, TO:0000276 - drought tolerance","PO:0009010 - seed ","Os08g0190100","LOC_Os08g09080.2, LOC_Os08g09080.1",null,"Os01g0800500","Os06g0726400",-1.9654859,0,null,"FGL","fgl(fl), fl, fgl, OsPorB, PoPA, PORA, porA, OsPORA, PORB, OsPORB","FADED GREEN LEAF","faded green leaf, NADPH: protochlorophyllide oxidoreductase B, NADPH-dependent protochlorophyllide oxidoreductase A",10," Biochemical character,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0016630 - protochlorophyllide reductase activity, GO:0015979 - photosynthesis, GO:0009658 - chloroplast organization, GO:0015995 - chlorophyll biosynthetic process, GO:0009507 - chloroplast, GO:0009416 - response to light stimulus, GO:0007623 - circadian rhythm, GO:0000166 - nucleotide binding, GO:0048366 - leaf development","TO:0000063 - mimic response, TO:0000655 - leaf development trait, TO:0000496 - carotenoid content, TO:0000299 - leaf lamina color, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000075 - light sensitivity, TO:0000298 - chlorophyll ratio","PO:0001050 - leaf development stage , PO:0009025 - vascular leaf ","Os10g0496900","LOC_Os10g35370.2, LOC_Os10g35370.1","Os06g0704600","Os12g0197500","Os10g0421800",0,2.4434547,null,"qGP-3 (gp3)","qGP-3 (gp3)","grains per panicle (QTL)-3","grains per panicle (QTL)-3",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0204600","LOC_Os05g11510",1.7392745,"Os01g0875000","LOC_Os01g65420",0,3.0359428,{"$nulls":10},"Os01g0926600","Os08g0438400","Os11g0490900","Os11g0490900",-1.6612319,-2.0225337,null,"Os06g0219900",5.218441,"Os07g0513200",-1.8564715,{"$nulls":17},"Os03g0267300",0,2.447728,{"$nulls":9},"LC1","OsGH3-1, GH3-1, OsGH3.1, GH3.1, OsLC1","LEAF INCLINATION 1","LEAF INCLINATION1",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0009651 - response to salt stress, GO:0016874 - ligase activity, GO:0009733 - response to auxin stimulus, GO:0016132 - brassinosteroid biosynthetic process","TO:0002672 - auxin content, TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle",null,"Os01g0785400","LOC_Os01g57610.1",null,null,"Os02g0168100","Os06g0695600",1.9816061,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",1," Reproductive organ - panicle","GO:0009451 - RNA modification, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0815900       ","LOC_Os01g60000.1",null,null,"Os09g0133600",-1.8123945,-1.5827652,null,"GLP8-12","OsGLP8-12","GERMIN-LIKE PROTEIN 8-12","Germin-like protein 8-12",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0048046 - apoplast, GO:0050832 - defense response to fungus, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0009414 - response to water deprivation, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009723 - response to ethylene stimulus, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance",null,"Os08g0231400","LOC_Os08g13440.3, LOC_Os08g13440.2, LOC_Os08g13440.1",null,"Os02g0513100","Os04g0401300",-2.0050352,0,null,"RF1","Rf1 (Rf-1), rf-1, PPR791, PPR8-1, Rf-1, Rf1, Rf-1A, Rf5, Rf1a, RF5, Rf5(t)*(Rf(t)*), RF1A, PPR6","RESTORATION OF FERTILITY 1","Pollen fertility restoration1, Pollen fertility restoration-1, \\Rf1 protein, mitochondrial precursor\\\", \\\"Rf1 protein, mitochondrial\\\", \\\"Protein Rf1, mitochondrial\\\", fertility restorer 5, Pentatricopeptide Repeat Protein RF5, pentatricopeptide repeat protein 791, Fertile revertant from II-32A, Pollen fertility restoration-5, RESTORATION OF FERTILITY 5, RESTORATION OF FERTILITY 1A, pentatricopeptide repeat motif containing gene 6, PPR motif-containing gene 6\"",10," Reproductive organ - Pollination, fertilization, fertility - Fertility restoration,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0005739 - mitochondrion, GO:0007275 - multicellular organismal development","TO:0000021 - copper sensitivity, TO:0000498 - female fertility restoration trait, TO:0000308 - male fertility restoration trait","PO:0009066 - anther ","Os10g0497432 ","LOC_Os10g35440.1","Os02g0817900","Os03g0235700","Os05g0332300",0,2.441363,null,"qGP-5-1 (gp5a)","qGP-5-1 (gp5a)","grains per panicle (QTL)-5-1","grains per panicle (QTL)-5-1",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0917400","LOC_Os01g68860",1.7494059,"Os01g0878900","LOC_Os01g65690",0,9.539226,{"$nulls":10},"Os06g0712500","Os01g0326300","Os01g0246700","Os01g0246700",-2.4092262,-1.8576914,null,"Os07g0148800",5.216684,"osa-miR397a",-1.8473768,{"$nulls":17},"Os06g0140700",2.8959248,1.2395021,{"$nulls":9},"BBX8","OsBBX8, OsK, OsCCT09, OsGhd2, OsK/Ghd2, CCT09, Ghd2","B-BOX-CONTAINING PROTEIN 8","B-box-containing protein 8, CCT domain-containing gene 9, CCT (CO, CO-LIKE and TOC1) domain protein 9, CCT domain protein 9, \\Grain number, plant height, and heading date2\\\", CONSTANS-like 1 protein\"",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0046686 - response to cadmium ion, GO:0009409 - response to cold, GO:0007623 - circadian rhythm, GO:0010045 - response to nickel ion, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0010039 - response to iron ion","TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance, TO:0000224 - iron sensitivity, TO:0000303 - cold tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0007616 - flowering stage ","Os02g0731700","LOC_Os02g49880.1",null,null,"Os05g0320700","Os06g0203800",1.9706968,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",7," Reproductive organ - panicle","GO:0009451 - RNA modification, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0635800        ","LOC_Os07g44170.1",null,null,"Os12g0552300",0,-1.8654522,null,"GLP8-2","OsGLP8-2, GER3, OsGER3, GLP16, OsEnS-117","GERMIN-LIKE PROTEIN 8-2","Germin-like protein 8-2, Germin-like protein 3, Germin-like protein 16, endosperm-specific gene 117",8," Seed,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity, GO:0030145 - manganese ion binding, GO:0048046 - apoplast","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0189100","LOC_Os08g08960.1",null,null,"Os12g0268000",-2.1136835,0,null,"SPL10","spl10","SPOTTED LEAF 10","spotted leaf10, spotted leaf 10, spotted leaf-10",10," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os04g0304200","Os02g0580800","Os11g0169200",1.594853,2.4397767,null,"qGP-7-1 (gp7a)","qGP-7-1 (gp7a)","grains per panicle (QTL)-7-1","grains per panicle (QTL)-7-1",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0713000","LOC_Os06g49880",1.7561938,"Os01g0894700","LOC_Os01g66980",0,1.815704,{"$nulls":10},"Os09g0531900","Os12g0226700","Os08g0499300","Os08g0499300",-2.1273124,-1.3271414,null,"Os07g0621800",5.2146544,"Os01g0933200",-1.8457562,{"$nulls":17},"Os06g0704600",1.2104546,1.337017,{"$nulls":9},"TWI1","OsSRO1a, SRO1a, OsTWI1, RCD1, OsRCD1","TWISTED-LEAF1","SRO protein 1a, SIMILAR to RCD1 a, TWISTED-LEAF 1, Nuclear proteins RCD1",10," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0009414 - response to water deprivation, GO:0003950 - NAD+ ADP-ribosyltransferase activity, GO:0009651 - response to salt stress, GO:0006979 - response to oxidative stress, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0009408 - response to heat, GO:0009269 - response to desiccation, GO:0051595 - response to methylglyoxal","TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity","PO:0001050 - leaf development stage ","Os10g0577800 ","LOC_Os10g42710.7, LOC_Os10g42710.6, LOC_Os10g42710.5, LOC_Os10g42710.4, LOC_Os10g42710.1, LOC_Os10g42710.2, LOC_Os10g42710.3",null,null,"Os09g0466400","Os01g0507000",1.9223205,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",7," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0621100         ","LOC_Os07g42880.1",null,null,"Os03g0725200",3.7773674,-2.226667,null,"GLP8-5","OsGLP8-5","GERMIN-LIKE PROTEIN 8-5","Germin-like protein 8-5",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0048046 - apoplast, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,null,"Os08g0189400","LOC_Os08g08990.1",null,null,"Os09g0473400",-2.1688263,0,null,"CHS","CHS*, Oschs, chs, chas, OsCHS, OsCHS1, CHS1, OsPKS26, PKS26, OsCHS24, CHS24","CHALCONE SYNTHASE","Chalcone synthase, Naregenin-chalcone synthase, chalcone synthase, chalcone synthase 1, polyketide synthase 26, Chalcone synthase 24",11," Biochemical character,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009718 - anthocyanin biosynthetic process, GO:0008415 - acyltransferase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010332 - response to gamma radiation, GO:0016210 - naringenin-chalcone synthase activity, GO:0051553 - flavone biosynthetic process, GO:0051555 - flavonol biosynthetic process, GO:0009408 - response to heat, GO:0009814 - defense response, incompatible interaction, GO:0009411 - response to UV, GO:0002213 - defense response to insect, GO:0009813 - flavonoid biosynthetic process","TO:0000160 - UV light sensitivity, TO:0000707 - pericarp color, TO:0000259 - heat tolerance, TO:0000071 - anthocyanin content, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000290 - flavonoid content, TO:0000653 - seed development trait","PO:0020104 - leaf sheath , PO:0009006 - shoot system , PO:0009047 - stem , PO:0001170 - seed development stage ","Os11g0530600","LOC_Os11g32650.1","Os06g0703500","Os09g0533600","Os06g0130100",2.7244008,2.4381118,null,"qGP-1 (gp1)","qGP-1 (gp1)","grains per panicle (QTL)-1","grains per panicle (QTL)-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0455200","LOC_Os05g38120",1.769432,"Os01g0952900","LOC_Os01g72360",0,-1.4009453,{"$nulls":10},"Os03g0359600","Os06g0551400","Os01g0180300","Os01g0180300",2.6470938,3.2926652,null,"Os01g0829600",5.211622,"Os03g0195100",-1.845352,{"$nulls":17},"Os08g0532200",1.8331337,1.8685623,{"$nulls":9},"_","osSRT701, OsSIRT701, OsSRT1, SRT1, OS-SIR2","_","sirtuin 1",4," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005983 - starch catabolic process, GO:0016787 - hydrolase activity, GO:0017136 - NAD-dependent histone deacetylase activity, GO:0033552 - response to vitamin B3, GO:0034355 - NAD salvage, GO:0035067 - negative regulation of histone acetylation, GO:0046872 - metal ion binding, GO:0048316 - seed development, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0046169 - methanol biosynthetic process, GO:0010150 - leaf senescence, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0080134 - regulation of response to stress, GO:0045820 - negative regulation of glycolysis, GO:0070403 - NAD binding, GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process","TO:0002668 - jasmonic acid content, TO:0000653 - seed development trait, TO:0000723 - microsporocyte development trait, TO:0002658 - starch grain synthesis, TO:0000266 - chalky endosperm, TO:0000696 - starch content, TO:0000269 - 100-seed weight, TO:0000180 - spikelet fertility, TO:0000249 - leaf senescence","PO:0001170 - seed development stage ","Os04g0271000","LOC_Os04g20270.1, LOC_Os04g20270.2",null,null,"Os07g0175100","Os04g0684500",1.9033203,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",2," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0127600          ","LOC_Os02g03530.1",null,null,"Os10g0573900",-2.1658926,-2.732528,null,"GLP8-6","OsGLP8-6","GERMIN-LIKE PROTEIN 8-6","Germin-like protein 8-6",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,null,"Os08g0189500","LOC_Os08g09000.1",null,null,"Os11g0199200",-2.169667,0,null,"GRHB","Grhb(t)*, Grhb, Grh4","GREEN RICE LEAFHOPPER RESISTANCE B","Green rice leafhopper resistance B, Green rice leafhopper resistance-4",11," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os09g0407200","Os04g0416400","Os04g0530900",0,2.4195888,null,"qGP-5-2 (gp5b)","qGP-5-2 (gp5b)","grains per panicle (QTL)-5-2","grains per panicle (QTL)-5-2",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0524800","LOC_Os08g41320",1.7823194,"Os02g0134300","LOC_Os02g04160",0,-1.9522705,{"$nulls":10},"Os03g0300900","Os10g0510500","Os08g0519800","Os08g0519800",-1.4634509,-0.9846638,null,"Os07g0189700",5.2034497,"Os06g0115300",-1.8400387,{"$nulls":17},"Os02g0697400",0,4.7170224,{"$nulls":9},"GL3.1","OsPPKL1, PPKL1, qGL3, OsPP54, PP54, OsGL3.1, qGL3/OsPPKL1","GRAIN LENGTH 3.1","protein phosphatase with Kelch-like repeat domain 1, grain length 3, Grain Length 3.1, Protein phosphatase 54",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0030145 - manganese ion binding, GO:0005506 - iron ion binding, GO:0009742 - brassinosteroid mediated signaling, GO:0004721 - phosphoprotein phosphatase activity, GO:0005886 - plasma membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0005829 - cytosol","TO:0000734 - grain length, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending",null,"Os03g0646900","LOC_Os03g44500.1",null,null,"Os11g0173500","Os03g0858800",1.8806342,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",3," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0009451 - RNA modification","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0283500           ","LOC_Os03g17510.1",null,null,"Os01g0224700",-4.1785526,-3.0126324,null,"GLP8-7","OsGLP8-7, GER6, OsRGLP2, RGLP2","GERMIN-LIKE PROTEIN 8-7","Germin-like protein 8-7, Germin-like protein 6, germin-like protein gene 2, Root GLP 2, root GLP2, root Germin-like protein 2",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0009651 - response to salt stress, GO:0048046 - apoplast, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0034059 - response to anoxia, GO:0002213 - defense response to insect, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0002242 - defense response to parasitic plant, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity","TO:0000315 - bacterial disease resistance, TO:0000444 - parasitic weed, TO:0000074 - blast disease, TO:0000015 - oxygen sensitivity, TO:0000303 - cold tolerance, TO:0000424 - brown planthopper resistance, TO:0000439 - fungal disease resistance, TO:0000605 - hydrogen peroxide content, TO:0006001 - salt tolerance, TO:0000168 - abiotic stress trait, TO:0000112 - disease resistance, TO:0000249 - leaf senescence, TO:0000188 - drought sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000075 - light sensitivity, TO:0000401 - plant growth hormone sensitivity","PO:0009010 - seed ","Os08g0189600","LOC_Os08g09010.1",null,null,"Os07g0107800",-2.1946523,0,null,"MPI","MPi z(Rb6), Rb6, MPiz","MODIFIER FOR BLAST RESISTANCE","Modifier for blast resistance gene Pi z, Modifier for blast resistance (Piz)",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000522 - stomatal conductance, TO:0000074 - blast disease","PO:0009025 - vascular leaf ",null,null,"Os03g0758800","Os03g0273800","Os08g0462700",2.1748066,2.403643,null,"qGP-6 (gp6)","qGP-6 (gp6)","grains per panicle (QTL)-6","grains per panicle (QTL)-6",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0731700","LOC_Os02g49880",1.7829956,"Os02g0192700","LOC_Os02g09940",0,7.461029,{"$nulls":10},"Os07g0510400","Os07g0108800","Os01g0231000","Os01g0231000",1.753673,1.1733681,null,"Os07g0689600",5.196869,"Os02g0681100",-1.8381257,{"$nulls":17},"Os01g0962700",0,0.9525461,{"$nulls":9},"PL","OsMYB55, OsMYB-2, MYB55, MYB-2, OsPL","PURPLE LEAF","R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55, purple leaf",5," Vegetative organ - Leaf,  Coloration - Anthocyanin,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010150 - leaf senescence, GO:0009755 - hormone-mediated signaling, GO:0009408 - response to heat, GO:0003682 - chromatin binding, GO:0030912 - response to deep water, GO:0009718 - anthocyanin biosynthetic process, GO:0003677 - DNA binding, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000524 - submergence tolerance, TO:0002672 - auxin content, TO:0002667 - abscisic acid content, TO:0002668 - jasmonic acid content, TO:0000071 - anthocyanin content, TO:0000734 - grain length, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0002724 - leaf sheath color","PO:0001054 - 4 leaf senescence stage ","Os05g0553400","LOC_Os05g48010.1",null,null,"Os01g0103800","Os04g0585200",1.8477923,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",2," Reproductive organ - panicle","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0170000            ","LOC_Os02g07360.1",{"$nulls":6},"GLP8-8","OsGLP8-8","GERMIN-LIKE PROTEIN 8-8","Germin-like protein 8-8",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding",null,null,"Os08g0189700","LOC_Os08g09020.1",null,null,"Os01g0114100",-2.1976218,0,null,"NAL2","nal2, nal3, cul2, OsWOX3A, WOX3A, Os NS, NS, OsNS, OsWOX3, OsNS1/OsNS2, OsPRS","NARROW LEAF 2","narrow leaf2, narrow leaf 2, narrow leaf-2, curl leaf-2, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3A",11," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009740 - gibberellic acid mediated signaling, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009734 - auxin mediated signaling pathway, GO:0048364 - root development, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis","TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height, TO:0001013 - lateral root number, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000166 - gibberellic acid sensitivity, TO:0000402 - grain width, TO:0000656 - root development trait, TO:0000370 - leaf width, TO:0000492 - leaf shape, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0009025 - vascular leaf , PO:0007520 - root development stage ","Os11g0102100","LOC_Os11g01130.1, LOC_Os11g01130.2","Os02g0539500","Os02g0125700","Os12g0468300",2.1176693,2.3992846,null,"qGP-7-2 (gp7b)","qGP-7-2 (gp7b)","grains per panicle (QTL)-7-2","grains per panicle (QTL)-7-2",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0225600","LOC_Os01g12580",1.7882758,"Os02g0217900","LOC_Os02g12610",0,-3.372493,{"$nulls":10},"Os01g0805500","Os02g0506500","Os06g0597000","Os06g0597000",2.1740987,1.4440836,null,"Os12g0625200",5.19574,"Os01g0955500",-1.8308636,{"$nulls":17},"Os02g0729400",0,2.62098,{"$nulls":9},"_","OsMYB8, MYB8, OsMYB305, MYB305","_","myb transcription factor 8, transcription factor MYB8",1," Vegetative organ - Leaf,  Coloration,  Tolerance and resistance - Stress tolerance,  Other","GO:0010150 - leaf senescence, GO:0042594 - response to starvation, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0030244 - cellulose biosynthetic process, GO:0005634 - nucleus, GO:0042128 - nitrate assimilation, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0009964 - negative regulation of flavonoid biosynthetic process","TO:0000249 - leaf senescence, TO:0000552 - shoot dry weight, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity","PO:0020141 - stem node , PO:0020142 - stem internode , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root ","Os01g0637800","LOC_Os01g45090.1",null,null,"Os02g0742200","Os09g0529300",1.831159,0,null,"_","PPR","_","Pentatricopeptide repeat (PPR) protein",7," Reproductive organ - panicle","GO:0009451 - RNA modification, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0260000            ","LOC_Os07g15640.1",{"$nulls":6},"GLP8-9","OsGLP8-9","GERMIN-LIKE PROTEIN 8-9","Germin-like protein 8-9",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast",null,null,"Os08g0189850","LOC_Os08g09040.1",null,null,"Os07g0412100",-2.363206,0,null,"PBR*","PBR*","PANICLE BLAST RESISTANCE","Panicle blast resistance",11," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000477 - panicle blast disease resistance",{"$nulls":3},"Os03g0826600","Os06g0704600","Os10g0150600",0,2.3875122,null,"qGW-3-1(t) (gw3)","qGW-3-1(t) (gw3)","grain weight (QTL)-3-1(t)","grain weight (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0279700","LOC_Os03g17150",1.7891141,"Os02g0245100","LOC_Os02g14790",0,-0.9853433,{"$nulls":10},"Os02g0207100","Os05g0552300","Os05g0230700","Os05g0230700",2.8708909,1.7808269,null,"Os07g0273700",5.1888843,"Os06g0551800",-1.8291126,{"$nulls":17},"Os06g0499500",0,1.0032129,{"$nulls":9},"MIR319A","OsmiR319a, Osa-miR319a, osa-MIR319aosa-miR319a osa-miR319a-3p osa-miR319a-3p.2-3p","MICRORNA319A","rice microRNA319a, MicroRNA319a",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Other","GO:0009965 - leaf morphogenesis, GO:0035068 - micro-ribonucleoprotein complex, GO:0009409 - response to cold, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA","TO:0000303 - cold tolerance, TO:0000370 - leaf width",null,"Os01g0659400","LOC_Os01g46984.1",null,null,"Os07g0516300","Os02g0557800",1.7785755,0,null,"UBP1-5","OsUBP1-5, OsUBP31, UBP31","UBIQUITIN-SPECIFIC PROCESSING PROTEASE 1-5","ubiquitin-specific processing protease 1-5, Ubiquitin-specific protease 31",8," Biochemical character,  Reproductive organ - panicle","GO:0004197 - cysteine-type endopeptidase activity, GO:0016579 - protein deubiquitination, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0004843 - ubiquitin-specific protease activity, GO:0008270 - zinc ion binding, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os08g0527600","LOC_Os08g41580.1",{"$nulls":6},"RL9","rl9, SLL1/RL9, SLL1, OsSLL1, OsADD1, ADD1, KANADI1","ROLLED LEAF 9","SHALLOT-LIKE1, SHALLOT-LIKE 1, ROLLED LEAF9, anther dehiscence defected 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0003682 - chromatin binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010158 - abaxial cell fate specification, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0010088 - phloem development, GO:0048364 - root development, GO:0048653 - anther development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0012501 - programmed cell death, GO:0048316 - seed development, GO:0009555 - pollen development","TO:0000655 - leaf development trait, TO:0001012 - lateral root length, TO:0000207 - plant height, TO:0000474 - glume opening, TO:0000391 - seed size, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000656 - root development trait, TO:0000085 - leaf rolling, TO:0000653 - seed development trait, TO:0000316 - photosynthetic ability, TO:0000053 - pollen sterility, TO:0000227 - root length, TO:0001006 - adventitious root number, TO:0000495 - chlorophyll content","PO:0001007 - pollen development stage , PO:0001050 - leaf development stage , PO:0006019 - leaf abaxial epidermis , PO:0001004 - anther development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0025426 - phloem development stage , PO:0020104 - leaf sheath , PO:0000293 - guard cell ","Os09g0395300","LOC_Os09g23200.1",null,null,"Os02g0823100",-2.4148831,0,null,"PBST*","Pbst*","PANICLE BLAST RESISTANCE","Panicle blast resistance",11," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000477 - panicle blast disease resistance",{"$nulls":3},"Os01g0749300","Os02g0817900","Os05g0498300",2.2618573,2.3783703,null,"qGW-5-1(t) (gw5a)","qGW-5-1(t) (gw5a)","grain weight (QTL)-5-1(t)","grain weight (QTL)-5-1(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0661800","LOC_Os06g45100",1.7923781,"Os02g0253700","LOC_Os02g15460",0,1.8251814,{"$nulls":10},"Os02g0243300","Os04g0359700","Os07g0182400","Os07g0182400",2.6529365,1.0804805,null,"Os06g0278000",5.1812615,"Os10g0209700",-1.8288916,{"$nulls":17},"Os04g0457000",0,5.0769076,{"$nulls":9},"_","OsCLP, CLP","_","chitinase-like protein",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits","GO:0048364 - root development, GO:0019722 - calcium-mediated signaling, GO:0045493 - xylan catabolic process, GO:0006508 - proteolysis, GO:0004190 - aspartic-type endopeptidase activity, GO:0048046 - apoplast","TO:0000472 - vascular bundle number, TO:0002655 - starch grain size, TO:0000181 - seed weight, TO:0000304 - seed thickness, TO:0000370 - leaf width, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000484 - seed shape, TO:0006036 - stem elongation, TO:0000227 - root length, TO:0000640 - total root number, TO:0000656 - root development trait","PO:0001031 - 4 root elongation stage , PO:0007520 - root development stage , PO:0007033 - whole plant development stage , PO:0007089 - stem elongation stage , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009005 - root , PO:0009047 - stem , PO:0009046 - flower , PO:0020104 - leaf sheath ","Os01g0937050","LOC_Os01g71080.1",null,null,"Os01g0160800","Os12g0468600",1.7705879,0,null,"_",null,"_",null,12," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os12g0210601",{"$nulls":7},"AGPL2","OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2, GIF2, GAS1","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 2","sativa ADP-glucose pyrophosphorylase large subunit 2, ADP-glucose Pyrophosphorylase large subunit 2, AGPase large subunit 2, AGPase large unit 2, ADP-glucose pyrophosphorylase subunit SH2, GRAIN INCOMPLETE FILLING 2",1," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005978 - glycogen biosynthetic process, GO:0009058 - biosynthetic process, GO:0009536 - plastid, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0010431 - seed maturation, GO:0048316 - seed development, GO:0016779 - nucleotidyltransferase activity, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0010581 - regulation of starch biosynthetic process","TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0006001 - salt tolerance, TO:0000104 - floury endosperm, TO:0000162 - seed quality, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000100 - shrunken endosperm","PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0009001 - fruit , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os01g0633100","LOC_Os01g44220.3, LOC_Os01g44220.4, LOC_Os01g44220.7, LOC_Os01g44220.6, LOC_Os01g44220.5, LOC_Os01g44220.1, LOC_Os01g44220.2",null,null,"Os01g0601000",-2.4867172,0,null,"PIF","Pi f, PIF, Pif, RMg3, Pi-f","PYRICULARIA ORYZAE RESISTANCE-F","Pyricularia oryzae resistance-f, Magnaporthe grisea resistance-f, Blast resistance f",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000509 - leaf blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os04g0462900","Os04g0304200","Os02g0553200",0,2.374568,null,"qGW-5-2(t) (gw5b)","qGW-5-2(t) (gw5b)","grain weight (QTL)-5-2(t)","grain weight (QTL)-5-2(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0668500","LOC_Os02g44820",1.8131456,"Os02g0269200","LOC_Os02g16909",0,3.0136003,{"$nulls":10},"Os04g0305700","Os10g0377400","Os07g0434500","Os07g0434500",1.4953214,1.2663385,null,"Os08g0511400",5.178243,"Os06g0667000",-1.8280029,{"$nulls":17},"Os10g0109300",0,3.37045,{"$nulls":9},"DST","OsDST, DLN102, OsDLN102","DROUGHT AND SALT TOLERANCE","zinc finger transcription factor DST, Drought and Salt Tolerance gene, DLN repressor 102, DLN motif protein 102",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010119 - regulation of stomatal movement, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress","TO:0002759 - grain number, TO:0006001 - salt tolerance, TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0000143 - relative biomass, TO:0000370 - leaf width, TO:0001016 - relative chlorophyll content, TO:0000095 - osmotic response sensitivity, TO:0000456 - spikelet number, TO:0000136 - relative water content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000608 - sodium content, TO:0000609 - potassium content",null,"Os03g0786400","LOC_Os03g57240.1",null,null,"Os03g0325600","Os02g0626100",1.7492199,0,null,"UBP1-8","OsUBP1-8, OsUBP33, UBP33","UBIQUITIN-SPECIFIC PROCESSING PROTEASE 1-8","Ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific processing protease 1-8, Ubiquitin-specific protease 33",8," Biochemical character,  Reproductive organ - panicle","GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0010229 - inflorescence development, GO:0008270 - zinc ion binding, GO:0004843 - ubiquitin-specific protease activity, GO:0016579 - protein deubiquitination, GO:0004197 - cysteine-type endopeptidase activity","TO:0000621 - inflorescence development trait","PO:0009029 - stamen , PO:0001083 - inflorescence development stage ","Os08g0528100","LOC_Os08g41630.1",{"$nulls":6},"AGPL4","OsAGPL4, APL4, OsAPL4, OsSTA193","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4","sativa ADP-glucose pyrophosphorylase large subunit 4, ADP-glucose Pyrophosphorylase large subunit 4, AGPase large subunit 4, AGPase large unit 4",7," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016779 - nucleotidyltransferase activity, GO:0019252 - starch biosynthetic process, GO:0009058 - biosynthetic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009536 - plastid","TO:0000106 - male sterility type, TO:0000696 - starch content","PO:0009089 - endosperm , PO:0009066 - anther ","Os07g0243200","LOC_Os07g13980.1",null,null,"Os02g0106100",-3.254226,0,null,"PIIS1","Pi is1(Rb4), Rb4, Rb-4, Piis1, Pi-is-1","PYRICULARIA ORYZAE RESISTANCE IS-1","Pyricularia oryzae resistance-is-1, Magnaporthe grisea resistance-is1, Blast resistance is1",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000511 - phosphorus uptake","PO:0009025 - vascular leaf ",null,null,"Os02g0573200","Os06g0703500","Os03g0130900",0,2.371442,null,"qGW-7-1(t) (gw7)","qGW-7-1(t) (gw7)","grain weight (QTL)-7-1(t)","grain weight (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0894700","LOC_Os01g66980",1.815704,"Os02g0324700","LOC_Os02g21920",0,-0.9914401,{"$nulls":10},"Os04g0530900","Os07g0227600","Os05g0150300","Os05g0150300",-1.3731136,-1.140707,null,"Os10g0554900",5.163193,"Os05g0460000",-1.8242869,{"$nulls":17},"Os12g0210200",0,1.0485562,{"$nulls":9},"_","OsPAPST1","_","3'-Phosphoadenosine 5'-Phosphosulfate Transporter1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane",null,null,"Os01g0265200","LOC_Os01g16040.1",null,null,"Os06g0208100","Os01g0718300",1.7013999,0,null,"_",null,"_","Formin-like protein",3," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0010114 - response to red light","TO:0000158 - red light sensitivity, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0725200","LOC_Os03g51530.1",{"$nulls":6},"AGPS1","OsAGPS1, APS1, OsAPS1, AGPsma","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1","sativa ADP-glucose pyrophosphorylase small subunit 1, ADP-glucose Pyrophosphorylase small subunit 1, AGPase small subunit 1, Adenosine diphosphate glucose pyrophosphorylase, adenosine diphosphoglucose pyrophosphorylase, ADP-glucose pyrophosphorylase small unit 1, AGPase S1",9," Biochemical character,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0019252 - starch biosynthetic process, GO:0009413 - response to flooding, GO:0009536 - plastid, GO:0009058 - biosynthetic process, GO:0009501 - amyloplast, GO:0016779 - nucleotidyltransferase activity","TO:0000286 - submergence sensitivity, TO:0000266 - chalky endosperm","PO:0009089 - endosperm ","Os09g0298200","LOC_Os09g12660.2, LOC_Os09g12660.1",null,null,"Os03g0215400",-3.8352463,0,null,"PIKUR2","Pi kur2*, PIKUR2, Pikur2, Pikur2*, RMg10, Pi-kur 2, Pi-kur2","PYRICULARIA ORYZAE RESISTANCE-KUR-2","Pyricularia oryzae resistance-kur-2, Magnaporthe grisea resistance-kur2, Blast resistance kur2",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000515 - relative growth rate","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os01g0869200","Os09g0407200","Os12g0541300",5.8683686,2.361488,null,"qGW-11-1(t) (gw11)","qGW-11-1(t) (gw11)","grain weight (QTL)-11-1(t)","grain weight (QTL)-11-1(t)",11," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0817800","LOC_Os02g57270",1.8248959,"Os02g0506500","LOC_Os02g30310",0,-1.0128212,{"$nulls":10},"Os04g0613700","Os01g0773600","Os11g0463600","Os11g0463600",-1.787105,-1.0070429,null,"Os09g0482780",5.1618247,"Os03g0841700",-1.822158,{"$nulls":17},"Os06g0132400",1.801102,3.1289246,{"$nulls":9},"LC2","OsLC2, OsVIL2, VIL2, OsVIL3","LEAF INCLINATION 2","leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3",2," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0051302 - regulation of cell division, GO:0009733 - response to auxin stimulus, GO:2000028 - regulation of photoperiodism, flowering","TO:0000166 - gibberellic acid sensitivity, TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000163 - auxin sensitivity, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0006032 - panicle size, TO:0000615 - abscisic acid sensitivity, TO:0002616 - flowering time",null,"Os02g0152500","LOC_Os02g05840.1",null,null,"Os12g0268000","Os04g0671900",1.6843008,0,null,"_",null,"_",null,10," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os10g0366400","LOC_Os10g22170.1, LOC_Os10g22170.2",{"$nulls":6},"ABI5","OsABI5, OsbZIP10, OsABF1, OREB1, OsABI5-1, OsABI5-2, OsOREB1, OREB1","ABA INSENSITIVE 5","ABA Insensitive 5, bZIP-type transcription factor ABI5, bZIP transcription factors OsABI5, bZIP transcription factor 10, Abscisic acid insensitive 5",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0030187 - melatonin biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0009845 - seed germination, GO:0009737 - response to abscisic acid stimulus, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0042744 - hydrogen peroxide catabolic process, GO:0009651 - response to salt stress, GO:0009725 - response to hormone stimulus, GO:0010152 - pollen maturation, GO:0009733 - response to auxin stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0010029 - regulation of seed germination, GO:0045449 - regulation of transcription, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000420 - fertility related trait, TO:0000615 - abscisic acid sensitivity, TO:0000483 - germinability at low temperature, TO:0000303 - cold tolerance, TO:0000401 - plant growth hormone sensitivity, TO:0000053 - pollen sterility, TO:0000429 - salt sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000253 - seed dormancy, TO:0000163 - auxin sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0009049 - inflorescence , PO:0020091 - obsolete microgametophyte ","Os01g0859300","LOC_Os01g64000.3, LOC_Os01g64000.2, LOC_Os01g64000.1",null,null,"Os02g0783700",-4.0521126,0,null,"PISE1","Pi se1(Rb1), Rb1, Pise1, RMg11, Pi-se, Pi-se-1, Pise-1, Rb-1","PYRICULARIA ORYZAE RESISTANCE SE 1","Pyricularia oryzae resistance-se-1, Magnaporthe grisea resistance-se1, Blast resistance se1",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000516 - relative root length, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os03g0358100","Os03g0758800","Os01g0866400",-3.1494305,2.356459,null,"qGYD-1-1","qGYD-1-1","grain yield per plant (QTL)-1-1","grain yield per plant (QTL)-1-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0253700","LOC_Os02g15460",1.8251814,"Os02g0510600","LOC_Os02g30650",0,2.0547333,{"$nulls":10},"Os05g0500000","Os09g0467200","Os08g0528900","Os08g0528900",-1.678867,-1.0100232,null,"Os02g0614600",5.1561527,"Os05g0439000",-1.8216048,{"$nulls":17},"Os12g0541300",5.8683686,2.361488,{"$nulls":9},"TDD1","OsTDD1, ASB1, OASB1, OsASbeta1, ASbeta1, TDD1/OASB1","TRYPTOPHAN DEFICIENT DWARF 1","anthranilate synthase beta subunit 1, Anthranilate synthase beta 1 subunit, tryptophan deficient dwarf",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009851 - auxin biosynthetic process, GO:0009790 - embryonic development, GO:0000162 - tryptophan biosynthetic process, GO:0009848 - indoleacetic acid biosynthetic process via tryptophan, GO:0002213 - defense response to insect, GO:0009617 - response to bacterium, GO:0009507 - chloroplast, GO:0009411 - response to UV, GO:0009723 - response to ethylene stimulus","TO:0002674 - tryptophan content, TO:0000424 - brown planthopper resistance, TO:0000227 - root length, TO:0002672 - auxin content, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000064 - embryo related trait, TO:0000499 - flower anatomy and morphology trait, TO:0000160 - UV light sensitivity",null,"Os04g0463500","LOC_Os04g38950.1, LOC_Os04g38950.3, LOC_Os04g38950.2",null,null,"Os02g0532800","Os01g0769700",1.675939,0,null,"_",null,"_","\\Protein CHUP1, chloroplastic\\\"\"",3," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0172100","LOC_Os03g07590.1",{"$nulls":6},"AGO17","OsAGO17","ARGONAUTE 17","Protein argonaute 17",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0051512 - positive regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0031047 - gene silencing by RNA, GO:0003676 - nucleic acid binding, GO:0005739 - mitochondrion","TO:0000449 - grain yield per plant, TO:0000391 - seed size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000266 - chalky endosperm, TO:0000455 - seed set percent, TO:0000456 - spikelet number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000590 - grain weight","PO:0020141 - stem node ","Os02g0169400","LOC_Os02g07310.1",null,null,"Os01g0800500",-5.3757,0,null,"PI30","Pi-30(t), Pi30(t)","PYRICULARIA ORYZAE RESISTANCE 30","Magnaporthe grisea resistance 30, Blast resistance 30",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000482 - chemical stress sensitivity, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance",{"$nulls":3},"Os03g0780400","Os02g0539500","Os05g0519600",0,2.3533654,null,"qGYD-1-2","qGYD-1-2","grain yield per plant (QTL)-1-2","grain yield per plant (QTL)-1-2",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0733300","LOC_Os02g50040",1.841709,"Os02g0574100","LOC_Os02g36450",0,-3.042162,{"$nulls":10},"Os06g0289900","Os02g0603600","Os08g0532500","Os08g0532500",-1.3090434,-1.0528625,null,"Os09g0511900",5.1503463,"Os07g0613300",-1.8188405,{"$nulls":17},"Os10g0493600",1.6268731,1.5362161,{"$nulls":9},"BOP1","OsNPR5, NPR5, NH4, OsNH4, OsBOP1","BLADE-ON-PETIOLE 1","NPR1-like gene 5, NPR1 homolog 4, OsBLADE-ON-PETIOLE1",1," Vegetative organ - Leaf","GO:0009954 - proximal/distal pattern formation, GO:0005634 - nucleus, GO:0009790 - embryonic development, GO:0048366 - leaf development, GO:0005737 - cytoplasm, GO:0009944 - polarity specification of adaxial/abaxial axis, GO:0010254 - nectary development, GO:0048439 - flower morphogenesis, GO:0010227 - floral organ abscission, GO:0010582 - floral meristem determinacy","TO:0000492 - leaf shape, TO:0002689 - leaf sheath length","PO:0009105 - inflorescence branch meristem , PO:0020148 - shoot apical meristem , PO:0020104 - leaf sheath , PO:0000017 - vascular leaf primordium , PO:0020105 - ligule , PO:0020128 - leaf margin ","Os01g0948900","LOC_Os01g72020.1, LOC_Os01g72020.2",null,null,"Os01g0884200","Os03g0640800",1.6751747,0,null,"_",null,"_","Pyruvate decarboxylase",5," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os05g0469701",{"$nulls":7},"AGO1C","OsAGO1c, OsAGO1, AGO1, AGO1c","ARGONAUTE 1C","Protein argonaute 1C, Protein argonaute 1, argonaute1",2," Seed - Physiological traits,  Other","GO:0003676 - nucleic acid binding, GO:0031047 - gene silencing by RNA","TO:0000345 - seed viability",null,"Os02g0831600","LOC_Os02g58490.1",null,null,"Os02g0513100",-5.8503895,0,null,"PI18","Pi18(t)*, Pi18(t), Pi18, Pi-18(t), Pi-18","PYRICULARIA ORYZAE RESISTANCE 18","Pyricularia oryzae resistance 18, Magnaporthe grisea resistance-18, Blast resistance 18",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000493 - leaf composition trait, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os01g0310800","Os03g0826600","Os05g0217700",0,2.3523762,null,"qGYD-6-1","qGYD-6-1","grain yield per plant (QTL)-6-1","grain yield per plant (QTL)-6-1",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0164200","LOC_Os07g06990",1.8467737,"Os02g0589000","LOC_Os02g37654",0,{"$error":"#N/A"},{"$nulls":10},"Os06g0727300","Os03g0146400","Os04g0484900","Os04g0484900",-1.1907401,-0.9539693,null,"Os07g0510400",5.149489,"Os03g0341000",-1.8170595,{"$nulls":17},"Os12g0530100",0,3.463534,{"$nulls":9},"TSC1","ABCI7, OsABCI7, OsABCI7_1, OsABCI7_2, OsABCI8, ABCI8, OsABCI8.1, OsABCI8.2, OsCNL1, CNL1, OsTSC1, TSC1.1, TSC1.2","TRANSPLANT-SENSITIVE CHLOROPLAST-DEFICIENT 1","ABC transporter superfamily ABCI subgroup member 7, chlorotic and necrotic leaf1, transplant-sensitive chloroplast-deficient 1",11," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0006826 - iron ion transport, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0009536 - plastid, GO:0009646 - response to absence of light, GO:0055065 - metal ion homeostasis, GO:0009628 - response to abiotic stimulus, GO:0009657 - plastid organization, GO:0009658 - chloroplast organization, GO:0055070 - copper ion homeostasis, GO:0009642 - response to light intensity, GO:0010027 - thylakoid membrane organization, GO:0015995 - chlorophyll biosynthetic process, GO:0016887 - ATPase activity, GO:0033013 - tetrapyrrole metabolic process, GO:0046466 - membrane lipid catabolic process, GO:0006974 - response to DNA damage stimulus, GO:0006260 - DNA replication, GO:0006281 - DNA repair, GO:0012501 - programmed cell death, GO:0009826 - unidimensional cell growth, GO:0009409 - response to cold, GO:0070265 - necrotic cell death, GO:0055072 - iron ion homeostasis, GO:0042651 - thylakoid membrane","TO:0000316 - photosynthetic ability, TO:0000357 - growth and development trait, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000168 - abiotic stress trait, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000326 - leaf color, TO:0000145 - internode length, TO:0001018 - transpiration rate, TO:0000460 - light intensity sensitivity, TO:0001027 - net photosynthetic rate, TO:0000303 - cold tolerance, TO:0000652 - leaf necrosis","PO:0000003 - whole plant , PO:0025034 - leaf ","Os11g0490800","LOC_Os11g29850.1, LOC_Os11g29850.2",null,null,"Os10g0419500","Os06g0103600",1.6570779,0,null,"_",null,"_","4-Coumarate-CoA ligase",4," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os04g0310900",{"$nulls":7},"AGO2","OsAGO2","ARGONAUTE 2","sativa Argonaute 2, Protein argonaute 2, ARGONAUTE2",4," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009690 - cytokinin metabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0046466 - membrane lipid catabolic process, GO:0031047 - gene silencing by RNA, GO:0050687 - negative regulation of defense response to virus, GO:0006306 - DNA methylation, GO:0003676 - nucleic acid binding","TO:0000734 - grain length, TO:0002660 - cytokinin content, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000020 - black streak dwarf virus resistance, TO:0006001 - salt tolerance",null,"Os04g0615700","LOC_Os04g52540.1",null,null,"Os02g0137800",0,-0.9468778,null,"PI1","Pi1, Pi-1, Pi1-5C, Pi1-6C","PYRICULARIA ORYZAE RESISTANCE 1","Pyricularia oryzae resistance 1, Magnaporthe grisea resistance-1, Blast resistance 1",11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0005524 - ATP binding, GO:0009620 - response to fungus, GO:0006952 - defense response, GO:0017111 - nucleoside-triphosphatase activity","TO:0000504 - leaf temperature, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os04g0484900","Os01g0749300","Os08g0191900",2.3786328,2.335797,null,"qGYD-7-1","qGYD-7-1","grain yield per plant (QTL)-7-1","grain yield per plant (QTL)-7-1",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0861100","LOC_Os03g64320",1.8487477,"Os02g0640700","LOC_Os02g42800",0,4.648108,{"$nulls":10},"Os07g0510500","Os04g0573900","Os09g0551600","Os09g0551600",2.7729027,2.2946422,null,"Os05g0406800",5.145809,"Os01g0845000",-1.8143712,{"$nulls":17},"Os10g0564500",1.8656765,1.4809216,{"$nulls":9},"ARG1 ","ABCI8, OsABCI8, OsABCI9, ABCI9, OsARG1","ALBINO-REVERTIBLE GREEN 1","ABC transporter superfamily ABCI subgroup member 8, albino-revertible green 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0055068 - cobalt ion homeostasis, GO:0009941 - chloroplast envelope, GO:0009535 - chloroplast thylakoid membrane, GO:0006824 - cobalt ion transport, GO:0015675 - nickel ion transport, GO:0016021 - integral to membrane","TO:0000293 - chlorophyll-a content, TO:0000316 - photosynthetic ability, TO:0000295 - chlorophyll-b content, TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000056 - stem color, TO:0000326 - leaf color",null,"Os05g0400600","LOC_Os05g33230.1",null,null,"Os11g0184900","Os03g0602300",1.5881429,0,null,"_",null,"_",null,5," Reproductive organ - panicle","GO:0003677 - DNA binding, GO:0010229 - inflorescence development, GO:0005634 - nucleus","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os05g0162800","LOC_Os05g07010.1, LOC_Os05g07010.2",{"$nulls":6},"AGPL1","OsAGPL1, OsAPL1, APL1, OsAGPL3, AGPL3","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1","sativa ADP-glucose pyrophosphorylase large subunit 1, ADP-glucose Pyrophosphorylase large subunit 1, AGPase large subunit 1, ADP-glucose pyrophosphorylase large subunit 3, AGPase large unit 3",3," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009058 - biosynthetic process, GO:0005978 - glycogen biosynthetic process, GO:0016779 - nucleotidyltransferase activity, GO:0008878 - glucose-1-phosphate adenylyltransferase activity",null,"PO:0025034 - leaf ","Os03g0735000","LOC_Os03g52460.1",null,null,"Os07g0568300",0,-0.9563233,null,"STVB","Stvb(St2), St2, Stvb, Stv2","STRIPE DISEASE RESISTANCE B","Stripe disease resistance, Stripe disease resistance-b, Stripe disease resistance-2, STRIPE DISEASE RESISTANCE",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009615 - response to virus, GO:0009408 - response to heat","TO:0000446 - leaf drying, TO:0002688 - leaf lamina joint bending, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000259 - heat tolerance, TO:0000148 - viral disease resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ","Os11g0514000","LOC_Os11g31480.1","Os03g0188500","Os04g0462900","Os02g0125700",1.2156931,2.3285046,null,"qGYD-7-2","qGYD-7-2","grain yield per plant (QTL)-7-2","grain yield per plant (QTL)-7-2",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0137200","LOC_Os05g04610",1.8693342,"Os02g0654400","LOC_Os02g43750",0,-0.97860146,{"$nulls":10},"Os11g0461200","Os01g0860800","Os08g0108200","Os08g0108200",-2.8676589,-1.5532484,null,"Os07g0407900",5.1068683,"Os12g0134300",-1.8095843,{"$nulls":17},"Os04g0659100",0,4.2717166,{"$nulls":9},"PLS1","OsVHA-A, VHAA1, VHA-A1, OsVHA-A1, OsPLS1, OsPSL1/VHA-A1","PREMATURE LEAF SENESCENCE 1","vacuolar H+-ATPase subunit A, vacuolar-type H+-ATPase subunit A1, premature leaf senescence 1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005618 - cell wall, GO:0009734 - auxin mediated signaling pathway, GO:0007030 - Golgi organization, GO:0009555 - pollen development, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0033180 - proton-transporting V-type ATPase, V1 domain, GO:0009737 - response to abscisic acid stimulus, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010148 - transpiration, GO:0010150 - leaf senescence, GO:0010162 - seed dormancy, GO:0009941 - chloroplast envelope, GO:0046961 - proton-transporting ATPase activity, rotational mechanism, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0000325 - plant-type vacuole, GO:0005886 - plasma membrane, GO:0005774 - vacuolar membrane, GO:0005524 - ATP binding","TO:0000063 - mimic response, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000455 - seed set percent, TO:0000128 - harvest index, TO:0000592 - 1000-dehulled grain weight, TO:0000598 - protein content, TO:0000333 - sugar content, TO:0001027 - net photosynthetic rate, TO:0000040 - panicle length, TO:0000253 - seed dormancy, TO:0000249 - leaf senescence, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000615 - abscisic acid sensitivity, TO:0001018 - transpiration rate","PO:0001054 - 4 leaf senescence stage , PO:0025374 - seed dormant stage , PO:0020025 - micropyle ","Os06g0662000 ","LOC_Os06g45120.2, LOC_Os06g45120.1",null,null,"Os11g0124300","Os02g0685900",1.5876187,0,null,"_",null,"_",null,6," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os06g0100550",{"$nulls":7},"ANS","ANS, OsANS1, ANS1, LDOX, LDOX1, OsLDOX, OsLDOX1","ANTHOCYANIDIN SYNTHASE","anthocyanidin synthase, leucoanthocyanidin dioxygenase",1," Biochemical character,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0009718 - anthocyanin biosynthetic process, GO:0050589 - leucocyanidin oxygenase activity, GO:0009611 - response to wounding, GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0009813 - flavonoid biosynthetic process, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0010023 - proanthocyanidin biosynthetic process, GO:0009416 - response to light stimulus, GO:0007033 - vacuole organization, GO:0005506 - iron ion binding, GO:0048316 - seed development, GO:0009408 - response to heat","TO:0000259 - heat tolerance, TO:0000168 - abiotic stress trait, TO:0000290 - flavonoid content, TO:0000707 - pericarp color, TO:0000075 - light sensitivity, TO:0000653 - seed development trait, TO:0000071 - anthocyanin content","PO:0001170 - seed development stage ","Os01g0372500","LOC_Os01g27490.1",null,null,"Os03g0826600",-1.0878702,-0.96084374,null,"XA A*","Xa a*, XAA, Xaa*, Xaa","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE A","Xanthomonas oryzae pv. oryzae resistance-a, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE A, Xanthomonas campestris pv. oryzae resistance-a",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os07g0684000","Os02g0573200","Os01g0823500",0,2.3226073,null,"qGYD-10","qGYD-10","grain yield per plant (QTL)-10","grain yield per plant (QTL)-10",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0536300","LOC_Os08g42440",1.903288,"Os02g0668500","LOC_Os02g44820",0,1.8131456,{"$nulls":10},"Os02g0169300","Os07g0150700","Os02g0540700","Os02g0540700",-1.5451984,-1.6222826,null,"Os04g0627400",5.1058235,"Os04g0600300",-1.8078017,{"$nulls":17},"Os01g0883800",-2.0003462,1.0044001,{"$nulls":9},"VYL","OsClpP6, ClpP6, CLP6, NAL9, NAL9/VYL","VIRESCENT-YELLOW LEAF","plastidic caseinolytic protease 6, chloroplast Clp 6, Virescent-Yellow Leaf, Clp protease 6, narrow leaf 9",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009965 - leaf morphogenesis, GO:0009941 - chloroplast envelope, GO:0015979 - photosynthesis, GO:0004252 - serine-type endopeptidase activity, GO:0006508 - proteolysis, GO:0009534 - chloroplast thylakoid, GO:0009658 - chloroplast organization, GO:0009840 - chloroplastic endopeptidase Clp complex","TO:0006032 - panicle size, TO:0000370 - leaf width, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000346 - tiller number",null,"Os03g0411500","LOC_Os03g29810.1",null,null,"Os07g0558100","Os03g0157300",1.5712484,0,null,"_",null,"_",null,7," Reproductive organ - panicle","GO:0008270 - zinc ion binding, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os07g0646200","LOC_Os07g45180.1",{"$nulls":6},"DCL3B","OsDCL3b","DICER-LIKE 3B","Endoribonuclease Dicer homolog 3b, Dicer-like protein 3b",10," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0030145 - manganese ion binding, GO:0000287 - magnesium ion binding, GO:0004525 - ribonuclease III activity, GO:0005524 - ATP binding, GO:0031047 - gene silencing by RNA, GO:0003725 - double-stranded RNA binding, GO:0005634 - nucleus, GO:0006396 - RNA processing, GO:0008026 - ATP-dependent helicase activity, GO:0000380 - alternative nuclear mRNA splicing, via spliceosome","TO:0000396 - grain yield, TO:0002673 - amino acid content, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000421 - pollen fertility, TO:0000162 - seed quality, TO:0000598 - protein content",null,"Os10g0485600","LOC_Os10g34430.1",null,null,"Os04g0436100",-1.3397518,-0.97047997,null,"XA H*","Xa h*, XAH, Xah*, Xah","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE H","Xanthomonas oryzae pv. oryzae resistance-h, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE H, Xanthomonas campestris pv. oryzae resistance-h",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os08g0503800","Os01g0869200","Os10g0163040",3.7016354,2.3213081,null,"qNP-6-1 (NP-6)","qNP-6-1 (NP-6)","number of panicles per plant (QTL)-6-1","number of panicles per plant (QTL)-6-1",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os10g0477600","LOC_Os10g33760",1.9038072,"Os02g0690000","LOC_Os02g46473",0,2.6725676,{"$nulls":10},"Os03g0213200","Os02g0433600","Os10g0501300","Os10g0501300",-1.3677753,-1.0453898,null,"Os06g0174700",5.0986342,"Os03g0729000",-1.8073081,{"$nulls":17},"Os08g0424500",0,1.1904254,{"$nulls":9},"SET1","OsSET1, SDG721, OsSDG721","SET PROTEIN 1","SET protein 1, SET DOMAIN GROUP 721 protein",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005634 - nucleus, GO:0010446 - response to alkalinity, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0051568 - histone H3-K4 methylation, GO:0008168 - methyltransferase activity, GO:0008270 - zinc ion binding, GO:0009294 - DNA mediated transformation","TO:0000206 - leaf angle, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0020004 - shoot sodium content, TO:0000525 - sodium to potassium content ratio, TO:0020003 - shoot potassium content, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000481 - alkali sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000397 - grain size","PO:0009047 - stem , PO:0009005 - root , PO:0009039 - glume , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0218800","LOC_Os01g11952.1",null,null,"Os12g0122000","Os03g0294700",1.5126151,0,null,"_",null,"_",null,9," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os09g0513900","LOC_Os09g33882.1",{"$nulls":6},"F3'H","OsF3'H, OsCYP75B3, CYP75B3","FLAVONOID 3'-HYDROXYLASE","sativa flavonoid 3'-hydroxylase, Flavanone 3'-hydroxylase, P-450 75B3, Cytochrome P450 75B3, flavonoid 3'-monooxygenase",10," Biochemical character,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0048316 - seed development, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0045486 - naringenin 3-dioxygenase activity, GO:0005506 - iron ion binding, GO:0009813 - flavonoid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0016021 - integral to membrane","TO:0000071 - anthocyanin content, TO:0000259 - heat tolerance, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os10g0320100","LOC_Os10g17260.1",null,null,"Os02g0189100",0,-0.97741985,null,"XA","xa(t)*","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE","Xanthomonas oryzae pv. oryzae resistance",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os08g0374100","Os03g0358100","Os03g0857500",0,2.3101816,null,"qNFGP-1-1","qNFGP-1-1","number of filled grains per panicle (QTL)-1-1","number of filled grains per panicle (QTL)-1-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0332700","LOC_Os08g24390",1.9147564,"Os02g0697400","LOC_Os02g46970",0,4.7170224,{"$nulls":10},"Os01g0841600","Os01g0621900","Os02g0469200","Os02g0469200",-0.95828724,-1.0693129,null,"Os12g0601300",5.083589,"Os08g0173300",-1.8062282,{"$nulls":17},"Os10g0533500",0,3.4932086,{"$nulls":9},"FWL4","OsFWL4","FRUIT-WEIGHT2.2-LIKE 4","FW2.2-like 4",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0015691 - cadmium ion transport, GO:0051781 - positive regulation of cell division","TO:0000080 - micronutrient sensitivity, TO:0000346 - tiller number, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000370 - leaf width","PO:0009006 - shoot system , PO:0009047 - stem , PO:0009089 - endosperm ","Os03g0829900","LOC_Os03g61440.1",null,null,"Os04g0398000","Os09g0555500",1.4703366,0,null,"_",null,"_",null,12," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os12g0234000","LOC_Os12g13174.1",{"$nulls":6},"LSI6","Lsi6, OsNIP2;2, NIP2-2, OsLsi6, OsNIP2.2/OsLsi6, OsNIP2.2, NIP2.2","LOW SILICON RICE 6","Low silicon rice 6, Aquaporin NIP2-2, NOD26-like intrinsic protein 2-2",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0010035 - response to inorganic substance, GO:0015104 - antimonite transmembrane transporter activity, GO:0046685 - response to arsenic, GO:0016021 - integral to membrane, GO:0032523 - silicon efflux transmembrane transporter activity, GO:0005215 - transporter activity, GO:0042594 - response to starvation, GO:0051207 - silicic acid transport, GO:0055085 - transmembrane transport","TO:0000031 - silicon sensitivity, TO:0000007 - sulfur sensitivity","PO:0020141 - stem node ","Os06g0228200","LOC_Os06g12310.1",null,null,"Os06g0474200",0,-0.9868986,null,"XA10","Xa10, Xa-10","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 10","Xanthomonas oryzae pv. oryzae resistance 10, Xanthomonas campestris pv. oryzae resistance-10, Xanthomonas oryzae pv. oryzae resistance-10",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os07g0691800","Os03g0780400","Os09g0551600",2.7729027,2.2946422,null,"qNFGP-1-2","qNFGP-1-2","number of filled grains per panicle (QTL)-1-2","number of filled grains per panicle (QTL)-1-2",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0397500","LOC_Os04g32590",1.9183289,"Os02g0702100","LOC_Os02g47370",0,-2.1104476,{"$nulls":10},"Os01g0905800","Os02g0132500","Os03g0198900","Os03g0198900",1.0619564,1.2118767,null,"Os02g0630300",5.081969,"Os01g0771100",-1.7984475,{"$nulls":17},"Os06g0131700",5.644571,4.2799582,{"$nulls":9},"PCR1","OsFWL5, FWL5, OsPcr1, OsPCR1, OsFWL5/OsPCR1","PLANT CADMIUM RESISTANCE 1","FW2.2-like 5, fruit-weight 2.2-like 5, Plant cadmium resistance 1",10," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0005886 - plasma membrane, GO:0055065 - metal ion homeostasis, GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0015691 - cadmium ion transport, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010942 - positive regulation of cell death, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin","TO:0000203 - bacterial leaf streak disease resistance, TO:0000080 - micronutrient sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000655 - leaf development trait, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000351 - zinc sensitivity",null,"Os10g0112100","LOC_Os10g02300.3, LOC_Os10g02300.2, LOC_Os10g02300.1",null,null,"Os02g0120100","Os03g0305500",1.4425586,0,null,"_",null,"_","ABC transporter B family member",1," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os01g0290800",{"$nulls":7},"LCD1","NRAMP5, OsNRAMP5, OsNramp5, OsLCD1","LOW CADMIUM ACCUMULATION 1","BACTERIOCIDE EFFECT 5, NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 5, low cadmium accumulation 1",7," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010033 - response to organic substance, GO:0006811 - ion transport, GO:0007623 - circadian rhythm, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0009088 - threonine biosynthetic process, GO:0006523 - alanine biosynthetic process, GO:0006537 - glutamate biosynthetic process, GO:0015691 - cadmium ion transport, GO:0055072 - iron ion homeostasis, GO:0005886 - plasma membrane, GO:0010378 - temperature compensation of the circadian clock, GO:0010233 - phloem transport, GO:0009266 - response to temperature stimulus, GO:0046686 - response to cadmium ion, GO:0006828 - manganese ion transport, GO:0009094 - L-phenylalanine biosynthetic process","TO:0000044 - stigma exsertion, TO:0002673 - amino acid content, TO:0000388 - forage yield, TO:0000397 - grain size, TO:0000432 - temperature response trait","PO:0005059 - root endodermis , PO:0005772 - exodermis ","Os07g0257200","LOC_Os07g15370.1, LOC_Os07g15370.2",null,null,"Os02g0169300",0,-0.987922,null,"XA3","Xa-3, Xa3 (Xa4b, Xa6, Xa9, Xa w), Xa3, Xaw, Xa6, Xa9, Xa4-b, XA26, Xa26(t), Xa26(t)*, Xa26, RKb, MRKb, MRKB, TRKb, Xa3/Xa26","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 3","Xanthomonas oryzae pv. oryzae resistance 3, Xanthomonas campestris pv. oryzae resistance-3, Xanthomonas oryzae pv. oryzae resistance-3, Xanthomonas oryzae pv. oryzae resistance 26",11," Tolerance and resistance - Disease resistance","GO:0016021 - integral to membrane, GO:0042742 - defense response to bacterium, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,"LOC_Os11g47210.1","Os06g0551400","Os01g0310800","Os01g0292700",0,2.2945359,null,"qNFGP-3-1","qNFGP-3-1","number of filled grains per panicle (QTL)-3-1","number of filled grains per panicle (QTL)-3-1",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0495500","LOC_Os04g41820",1.9407967,"Os02g0702600","LOC_Os02g47420",0,4.0011487,{"$nulls":10},"Os12g0291400","Os01g0201100","Os03g0270000","Os03g0270000",-1.468778,-1.075112,null,"Os02g0833900",5.081926,"Os06g0160800",-1.7952458,{"$nulls":17},"Os06g0604200",0,3.9052277,{"$nulls":9},"FWL6","OsFWL6, OsCNR10, CNR10","FW2.2-LIKE 6","FW2.2-like 6, fruit-weight 2.2-like 6, CELL NUMBER REGULATOR10",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0046686 - response to cadmium ion, GO:0048366 - leaf development, GO:0005886 - plasma membrane, GO:0005634 - nucleus","TO:0000655 - leaf development trait, TO:0000080 - micronutrient sensitivity, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield",null,"Os03g0830200","LOC_Os03g61470.1",null,null,"Os10g0389200","Os06g0724900",1.4347986,0,null,"_",null,"_",null,6," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os06g0361500",{"$nulls":7},"REG1",null,"RICE EMBRYO GLOBULIN-1 PROTEIN",null,null," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0015671 - oxygen transport, GO:0019825 - oxygen binding, GO:0020037 - heme binding",{"$nulls":6},"Os03g0843300",0,-0.989985,null,"XA4","Xa4, Xa4(Xa4a), Xa-4, Xa4-a, WAK, wak, xa4","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 4","Xanthomonas oryzae pv. oryzae resistance 4, Xanthomonas campestris pv. oryzae resistance-4, Xanthomonas oryzae pv. oryzae resistance-4",11," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009689 - induction of phytoalexin biosynthetic process, GO:0009828 - plant-type cell wall loosening, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0052324 - cell wall cellulose biosynthetic process","TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000207 - plant height, TO:0000051 - stem strength",{"$nulls":3},"Os02g0663800","Os04g0484900","Os08g0414700",1.69453,2.293911,null,"qNFGP-5-1","qNFGP-5-1","number of filled grains per panicle (QTL)-5-1","number of filled grains per panicle (QTL)-5-1",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0226200","LOC_Os07g12390",1.9527107,"Os02g0733300","LOC_Os02g50040",0,1.841709,{"$nulls":10},"Os01g0869800","Os01g0841600","Os09g0542000","Os09g0542000",-1.9438957,-1.0918126,null,"Os10g0505700",5.068006,"Os03g0829200",-1.7933804,{"$nulls":17},"Os01g0279100",2.9026222,4.379773,{"$nulls":9},"FWL7","OsFWL7","FRUIT-WEIGHT2.2-LIKE 7","FW2.2-like 7",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0010233 - phloem transport, GO:0046686 - response to cadmium ion, GO:0048366 - leaf development, GO:0015691 - cadmium ion transport","TO:0000227 - root length, TO:0000552 - shoot dry weight, TO:0000080 - micronutrient sensitivity, TO:0000636 - relative shoot dry weight, TO:0000655 - leaf development trait, TO:0000465 - mineral and ion content related trait","PO:0009005 - root ","Os03g0830500","LOC_Os03g61500.1",null,null,"Os01g0385400","Os03g0109400",1.4288174,0,null,"_",null,"_","Metallopeptidase family M24 containing protein",12," Reproductive organ - panicle","GO:0042393 - histone binding, GO:0035101 - FACT complex, GO:0010229 - inflorescence development, GO:0031491 - nucleosome binding, GO:0034724 - DNA replication-independent nucleosome organization, GO:0032968 - positive regulation of RNA elongation from RNA polymerase II promoter, GO:0006368 - RNA elongation from RNA polymerase II promoter","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os12g0446500","LOC_Os12g26030.1",{"$nulls":6},"REG2","REG-2","RICE EMBRYO GLOBULIN-2 PROTEIN",null,null," Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances","GO:0020037 - heme binding, GO:0015671 - oxygen transport, GO:0009790 - embryonic development, GO:0019825 - oxygen binding","TO:0002653 - endosperm storage protein content",{"$nulls":5},"Os02g0208900",1.2093801,-1.0023584,null,"PIA","Pi a, Pia, Pi-a, Pia-1, Pia-2","PYRICULARIA ORYZAE RESISTANCE A","Pyricularia oryzae resistance-a, Magnaporthe grisea resistance-a, Blast resistance a",11," Tolerance and resistance - Disease resistance","GO:0006952 - defense response","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000507 - osmotic adjustment capacity","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os03g0669000","Os03g0188500","Os09g0532400",0,2.290649,null,"qNFGP-5-2","qNFGP-5-2","number of filled grains per panicle (QTL)-5-2","number of filled grains per panicle (QTL)-5-2",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0500400","LOC_Os05g42100",1.9572873,"Os02g0744200","LOC_Os02g51040",0,{"$error":"#N/A"},{"$nulls":10},"Os12g0292400","Os01g0318400","Os04g0544400","Os04g0544400",2.2318153,2.26373,null,"Os02g0192700",5.063101,"Os02g0806400",-1.787879,{"$nulls":17},"Os01g0136100",0,0.9654362,{"$nulls":9},"EBS","OsEBS","ENHANCING BIOMASS AND SPIKELET NUMBER","enhancing biomass and spikelet number",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0008283 - cell proliferation","TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000457 - total biomass yield, TO:0000449 - grain yield per plant, TO:0000456 - spikelet number","PO:0025034 - leaf ","Os05g0591400","LOC_Os05g51360.1",null,null,"Os09g0532000","Os09g0565200",1.3572193,0,null,"_",null,"_","MATE efflux family protein",3," Reproductive organ - panicle","GO:0015238 - drug transporter activity, GO:0005381 - iron ion transmembrane transporter activity, GO:0006855 - multidrug transport, GO:0010015 - root morphogenesis, GO:0006970 - response to osmotic stress, GO:0016021 - integral to membrane, GO:0055072 - iron ion homeostasis, GO:0017119 - Golgi transport complex, GO:0010229 - inflorescence development, GO:0005770 - late endosome, GO:0015297 - antiporter activity, GO:0009737 - response to abscisic acid stimulus, GO:0009646 - response to absence of light, GO:0009408 - response to heat, GO:0009624 - response to nematode","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0229500","LOC_Os03g12790.1",{"$nulls":6},"HAP3K","OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, NF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41","HAP3K SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear transcription factor Y subunit B-1, CCAAT-binding transcription factor subunit NF-YB1, leafy cotyledon 1, endosperm-specific gene 41, Nuclear Factor YB1, NUCLEAR FACTOR-Y subunit B1, NUCLEAR FACTOR-Y subunit NF-YB1, NF-YB subunit 1, NF-YB family 1",2," Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0045449 - regulation of transcription, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009960 - endosperm development, GO:0005634 - nucleus, GO:0010431 - seed maturation, GO:0005737 - cytoplasm, GO:0008283 - cell proliferation, GO:0005829 - cytosol","TO:0002672 - auxin content, TO:0000391 - seed size, TO:0000196 - amylose content, TO:0000184 - seed anatomy and morphology trait, TO:0002661 - seed maturation, TO:0000266 - chalky endosperm, TO:0000397 - grain size, TO:0000162 - seed quality, TO:0000653 - seed development trait","PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0007633 - endosperm development stage , PO:0005360 - aleurone layer ","Os02g0725900","LOC_Os02g49410.1",null,null,"Os01g0310800",-1.179885,-1.0326945,null,"ADH1","Adh1, Adh1/2, adh1/adh2, OsADH1","ALCOHOL DEHYDROGENASE 1","Alcohol dehydrogenase1, Alcohol dehydrogenase 1, Alcohol dehydrogenase-1, reduced adh activity, Alcohol dehydrogenase I",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0008270 - zinc ion binding, GO:0009413 - response to flooding, GO:0004022 - alcohol dehydrogenase (NAD) activity, GO:0018468 - alcohol dehydrogenase (acceptor) activity, GO:0005737 - cytoplasm","TO:0000524 - submergence tolerance",null,"Os11g0210300","LOC_Os11g10480.4, LOC_Os11g10480.1, LOC_Os11g10480.2","Os02g0220500","Os07g0684000","Os01g0524500",0,2.2737515,null,"qNFGP-6","qNFGP-6","number of filled grains per panicle (QTL)-6","number of filled grains per panicle (QTL)-6",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0753300","LOC_Os02g51710",1.9598923,"Os02g0753300","LOC_Os02g51710",0,1.9598923,{"$nulls":10},"Os04g0459500","Os04g0412300","Os01g0953801","Os01g0953801",2.1990469,4.34181,null,"Os07g0598000",5.05852,"Os11g0703000",-1.7869438,{"$nulls":17},"Os11g0610900",3.794843,2.055989,{"$nulls":9},"_","OsF5HL, F5HL, CYP84A7","_","Ferulate-5-hydroxylase",6," Biochemical character,  Vegetative organ - Leaf","GO:0010224 - response to UV-B, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0046424 - ferulate 5-hydroxylase activity, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0005783 - endoplasmic reticulum, GO:0009055 - electron carrier activity",null,null,"Os06g0349700","LOC_Os06g24180.1",null,null,"Os04g0401700","Os01g0757200",1.3517102,0,null,"ESP","OsESP","EPIGENETIC SHORT PANICLE","Epigenetic Short Panicle",1," Reproductive organ - panicle",null,"TO:0000040 - panicle length, TO:0000207 - plant height, TO:0006032 - panicle size",null,"Os01g0356951",{"$nulls":7},"DEP1","OsDEP1, EP, qPE9-1, DN1, DEP1/DN1/qPE9-1, qNGR9, qDEP1, RGG4/DEP1/DN1/qPE9-1/OsGGC3, RGG4, OsDN1, OsGGC3, GGC3","DENSE AND ERECT PANICLE 1","dense and erect panicle 1, erect-pose panicle, DENSE PANICLE 1, DENSE AND ERECT PANICLE1, DENSE AND ERECT PANICLES 1, G gamma subunit DEP1, Heterotrimeric G Protein gamma4 Subunit",9," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0048573 - photoperiodism, flowering, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009651 - response to salt stress, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005882 - intermediate filament","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000137 - days to heading, TO:0000050 - inflorescence branching, TO:0000397 - grain size, TO:0002759 - grain number, TO:0000456 - spikelet number",null,"Os09g0441900","LOC_Os09g26999.3, LOC_Os09g26999.2, LOC_Os09g26999.1",null,null,"Os05g0519400",0,-1.0439752,null,"DRP7","drp7, OsHSD1, LGF1, HSD1","DRIPPING-WET LEAF 7","dripping-wet leaf7, dripping-wet leaf 7, dripping-wet leaf-7, hydroxysteroid dehydrogenase 1, Leaf Gas Film 1, dripping wet leaf 7",11," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0006629 - lipid metabolic process, GO:0042335 - cuticle development, GO:0006633 - fatty acid biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0034309 - monohydric alcohol biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0016021 - integral to membrane, GO:0010166 - wax metabolic process, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009413 - response to flooding, GO:0005783 - endoplasmic reticulum, GO:0009741 - response to brassinosteroid stimulus, GO:0055088 - lipid homeostasis","TO:0000602 - total fat content, TO:0002677 - brassinosteroid sensitivity, TO:0000524 - submergence tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000114 - flooding related trait, TO:0000207 - plant height, TO:0000493 - leaf composition trait, TO:0000145 - internode length","PO:0009025 - vascular leaf , PO:0020104 - leaf sheath ","Os11g0499600","LOC_Os11g30560.1","Os01g0329800","Os08g0503800","Os02g0537700",1.9904842,2.2646053,null,"qNFGP-7-1","qNFGP-7-1","number of filled grains per panicle (QTL)-7-1","number of filled grains per panicle (QTL)-7-1",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0461000","LOC_Os11g27329",{"$f":"VLOOKUP(G195,AG:AH, 2,FALSE)","v":1.9769455},"Os02g0781400","LOC_Os02g54060",0,8.439939,{"$nulls":10},"Os10g0536500","Os10g0491000","Os08g0451400","Os08g0451400",-1.2792073,-1.0829905,null,"Os02g0568200",5.0546517,"Os01g0855200",-1.7868414,{"$nulls":17},"Os03g0592500",3.8585846,4.4201694,{"$nulls":9},"_","OsF5HL2, F5HL2, CYP84A6, OsCYP84A6, OsF5H1, F5H1","_","Ferulate-5-hydroxylase 2, ferule-5-hydroxylase-like 2, Cytochrome P450 84A6",3," Biochemical character,  Vegetative organ - Leaf","GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0009807 - lignan biosynthetic process, GO:0016021 - integral to membrane, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0046424 - ferulate 5-hydroxylase activity, GO:0010224 - response to UV-B, GO:0020037 - heme binding, GO:0005783 - endoplasmic reticulum, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000731 - lignin content, TO:0000733 - lignin biosynthesis trait",null,"Os03g0112900","LOC_Os03g02180.1",null,null,"Os05g0575000","Os11g0148500",1.3287393,0,null,"WLS5","OsWLS5","WEAKNESS AND LEAF SENESCENCE 5","weakness and leaf senescence5",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0008283 - cell proliferation, GO:0009826 - unidimensional cell growth, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling","TO:0000040 - panicle length, TO:0002675 - gibberellic acid content, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000566 - stomatal frequency, TO:0000495 - chlorophyll content, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os05g0141050","LOC_Os05g04900.1",{"$nulls":6},"DLT","dlt, OsGRAS32, OsDLT, OsDLT1, DTL1, OsGRAS-32, OsGRAS32, GRAS-32, GRAS32, SMOS2/DLT, SMOS2, OsSMOS2","DWARF AND LOW-TILLERING","GRAS protein 32, SMALL ORGAN SIZE 2",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0008283 - cell proliferation, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling","TO:0002601 - stamen size, TO:0000329 - tillering ability, TO:0001035 - stem width, TO:0000326 - leaf color, TO:0000227 - root length, TO:0000206 - leaf angle, TO:0002637 - leaf size, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0002677 - brassinosteroid sensitivity, TO:0002684 - plant cell size, TO:0000346 - tiller number, TO:0002602 - pistil size, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending",null,"Os06g0127800","LOC_Os06g03710.1",null,null,"Os03g0818800",0,-1.0689335,null,"XA21","Xa21*, Xa21, OsXA21","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 21","Xanthomonas oryzae pv. oryzae resistance 21, Xanthomonas campestris pv. oryzae resistance-21, Xanthomonas oryzae pv. oryzae resistance-21, Xanthomonas resistance 21",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005515 - protein binding, GO:0005524 - ATP binding, GO:0016567 - protein ubiquitination, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0002679 - respiratory burst during defense response, GO:0004672 - protein kinase activity, GO:0006468 - protein amino acid phosphorylation","TO:0000470 - vascular tissue related trait, TO:0000731 - lignin content, TO:0000276 - drought tolerance, TO:0000507 - osmotic adjustment capacity, TO:0000175 - bacterial blight disease resistance",null,"Os11g0559200","LOC_Os11g35500.1","Os08g0126300","Os08g0374100","Os03g0711100",0,2.263133,null,"qNFGP-7-2","qNFGP-7-2","number of filled grains per panicle (QTL)-7-2","number of filled grains per panicle (QTL)-7-2",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0475700","LOC_Os07g29310",1.9867239,"Os02g0782500","LOC_Os02g54140",0,{"$f":"VLOOKUP(K196,H:I, 2,FALSE)","v":-2.0676515},{"$nulls":10},"Os01g0720500","Os02g0601500","Os12g0579000","Os12g0579000",-1.0492018,-0.9946081,null,"Os07g0176600",5.045758,"Os03g0143400",-1.779047,{"$nulls":17},"Os12g0113500",2.9253447,2.4671364,{"$nulls":9},"SMT1-1","Ossmt1-1, OsSMT1-1","STEROL METHYLTRANSFERASE 1-1 ","sterol methyltransferase 1-1, sterol-C24-methyltransferase 1-1",7," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009793 - embryonic development ending in seed dormancy, GO:0009805 - coumarin biosynthetic process, GO:0006597 - spermine biosynthetic process, GO:0016126 - sterol biosynthetic process, GO:0016132 - brassinosteroid biosynthetic process, GO:0019745 - pentacyclic triterpenoid biosynthetic process, GO:0005773 - vacuole, GO:0003838 - sterol 24-C-methyltransferase activity, GO:0042398 - cellular amino acid derivative biosynthetic process, GO:0006084 - acetyl-CoA metabolic process, GO:0008295 - spermidine biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0006598 - polyamine catabolic process, GO:0009506 - plasmodesma, GO:0009611 - response to wounding","TO:0000370 - leaf width, TO:0000135 - leaf length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000136 - relative water content, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000040 - panicle length",null,"Os07g0206700","LOC_Os07g10600.1, LOC_Os07g10600.2",null,null,"Os05g0572000","Os07g0563300",1.3104769,0,null,"_","SPL24","_","spotted leaf 24, spotted-leaf 24",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic,  Character as QTL - Yield and productivity","GO:0009863 - salicylic acid mediated signaling pathway, GO:0012501 - programmed cell death, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000316 - photosynthetic ability, TO:0000180 - spikelet fertility, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000496 - carotenoid content, TO:0000293 - chlorophyll-a content, TO:0000346 - tiller number, TO:0000249 - leaf senescence, TO:0000325 - soluble protein content, TO:0000063 - mimic response, TO:0000592 - 1000-dehulled grain weight, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000295 - chlorophyll-b content","PO:0001054 - 4 leaf senescence stage ",{"$nulls":8},"PIP1;3","OsPIP1;3. PIP1.3, PIP1-3, RWC3, RWC-3, OsPIP1-3","PLASMA MEMBRANE INTRINSIC PROTEIN 1;3","Aquaporin PIP 1.3, Aquaporin PIP 1-3, Plasma membrane intrinsic protein 1-3, Water channel protein RWC3, Aquaporin RWC3",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006833 - water transport, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0010036 - response to boron, GO:0046713 - boron transport, GO:0042742 - defense response to bacterium, GO:0015250 - water channel activity, GO:0042128 - nitrate assimilation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0005215 - transporter activity, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0006950 - response to stress, GO:0006810 - transport","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0001017 - water use efficiency, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000457 - total biomass yield, TO:0000241 - leaf number, TO:0000442 - plant fresh weight, TO:0000357 - growth and development trait, TO:0001027 - net photosynthetic rate, TO:0000175 - bacterial blight disease resistance, TO:0000018 - boron sensitivity, TO:0000352 - plant dry weight","PO:0025034 - leaf , PO:0005059 - root endodermis , PO:0009005 - root ","Os02g0823100","LOC_Os02g57720.1",null,null,"Os02g0115900",-1.9412088,-1.0845118,null,"D27","d27(d t), dt, dwf23, d27, OsD27","DWARF BUNKETSUTO TILLERING","bunketsuto tillering dwarf, dwarf-27, DWARF27, DWARF 27, iron-binding protein D27, OsDWARF27",11," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0016859 - cis-trans isomerase activity, GO:0007275 - multicellular organismal development, GO:0042594 - response to starvation, GO:0009733 - response to auxin stimulus, GO:0009507 - chloroplast, GO:0005506 - iron ion binding, GO:0009735 - response to cytokinin stimulus","TO:0001013 - lateral root number, TO:0000163 - auxin sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity, TO:0000329 - tillering ability, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity","PO:0009047 - stem , PO:0009025 - vascular leaf , PO:0006343 - axillary shoot system ","Os11g0587000",null,"Os01g0871200","Os07g0691800","Os03g0738400",0,2.250975,null,"qTNSP-1-1","qTNSP-1-1","total number of spikelets per panicle (QTL)-1-1","total number of spikelets per panicle (QTL)-1-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0603300","LOC_Os01g41900",1.9925747,"Os02g0792000","LOC_Os02g54920",0,3.080574,{"$nulls":10},"Os08g0512500","Os05g0464300","Os08g0438400","Os08g0438400",-1.1426324,-1.6525875,null,"Os07g0287400",5.040909,"Os03g0218400",-1.771308,{"$nulls":17},"Os02g0657000",3.3227575,4.613399,{"$nulls":9},"_","OsHPPD, HPPD, Osl30, l30","_","4-hydroxyphenylpyruvate dioxygenase, p-hydroxyphenylpyruvate dioxygenase",2," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0005739 - mitochondrion, GO:0010150 - leaf senescence, GO:0046872 - metal ion binding, GO:0010189 - vitamin E biosynthetic process, GO:0009072 - aromatic amino acid family metabolic process, GO:0006979 - response to oxidative stress, GO:0005737 - cytoplasm, GO:0010236 - plastoquinone biosynthetic process, GO:0006572 - tyrosine catabolic process, GO:0006559 - L-phenylalanine catabolic process, GO:0009651 - response to salt stress, GO:0016117 - carotenoid biosynthetic process, GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity","TO:0000249 - leaf senescence, TO:0002657 - oxidative stress, TO:0006001 - salt tolerance","PO:0001054 - 4 leaf senescence stage ","Os02g0168100 ","LOC_Os02g07160.1",null,null,"Os07g0638400","Os12g0477200",1.2716502,0,null,"PIP5K1","OsPIP5K1","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1","phosphatidylinositol-4-phosphate 5-kinase 1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity, GO:0016307 - phosphatidylinositol phosphate kinase activity, GO:0040008 - regulation of growth, GO:0019932 - second-messenger-mediated signaling, GO:0005634 - nucleus","TO:0000077 - shoot anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0000034 - vascular system , PO:0000017 - vascular leaf primordium , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os03g0705300","LOC_Os03g49800.1",{"$nulls":6},"PIP2;2","OsPIP2;2, PIP2-2, OsPIP2-3","PLASMA MEMBRANE INTRINSIC PROTEIN 2;2","Probable aquaporin PIP2-2, Plasma membrane intrinsic protein 2-2",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0005215 - transporter activity, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0034021 - response to silicon dioxide, GO:0055085 - transmembrane transport, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0046686 - response to cadmium ion, GO:0006833 - water transport, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0006002 - proline content","PO:0025034 - leaf ","Os02g0629200","LOC_Os02g41860.2, LOC_Os02g41860.1, LOC_Os02g41860.4, LOC_Os02g41860.3",null,null,"Os09g0455500",-1.4617075,-1.1798892,null,"PIK","Pik, RMg8, Pi-k, Pik-2, Pik-1, Pik1, Pik2, Pik-H4","PYRICULARIA ORYZAE RESISTANCE K","Pyricularia oryzae resistance-k, Magnaporthe grisea resistance-k, Blast resistance k",11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0009620 - response to fungus, GO:0005524 - ATP binding, GO:0017111 - nucleoside-triphosphatase activity","TO:0000513 - potassium concentration, TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ","Os11g0688832/Os11g0689100","LOC_Os11g46210.1, LOC_Os11g46200.1","Os04g0600300","Os06g0551400","Os01g0749200",3.0105135,2.2505827,null,"qTNSP-2-2","qTNSP-2-2","total number of spikelets per panicle (QTL)-2-2","total number of spikelets per panicle (QTL)-2-2",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0174100","LOC_Os02g07780",1.9949021,"Os02g0817800","LOC_Os02g57270",0,1.8248959,{"$nulls":10},"Os01g0938100","Os12g0170600","Os11g0246100","Os11g0246100",-1.1768972,-1.2360724,null,"Os05g0562800",5.0386844,"Os09g0272900",-1.7700769,{"$nulls":17},"Os11g0106700",0,1.9319158,{"$nulls":9},"_","Osh69, h69","_","alkaline alpha-galactosidase",8," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0008152 - metabolic process, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0010150 - leaf senescence","TO:0002649 - pesticide sensitivity, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os08g0495800","LOC_Os08g38710.1",null,null,"Os02g0569900","Os02g0755000",1.2398332,0,null,"DSL1","OsDSL1, OsHDA711, HDA711","DWARF WITH SLENDER LEAF1","dwarf with slender leaf 1, Histone Deacetylase 711",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle","GO:0051781 - positive regulation of cell division, GO:0000118 - histone deacetylase complex, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0070933 - histone H4 deacetylation, GO:0070932 - histone H3 deacetylation, GO:0046872 - metal ion binding, GO:0004407 - histone deacetylase activity, GO:0048608 - reproductive structure development, GO:0010229 - inflorescence development","TO:0000145 - internode length, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000370 - leaf width, TO:0000472 - vascular bundle number, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os04g0409600","LOC_Os04g33480.1",{"$nulls":6},"MIR159A","miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2","MICRORNA159A",null,1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009555 - pollen development, GO:0035068 - micro-ribonucleoprotein complex, GO:0048316 - seed development, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0048443 - stamen development","TO:0000074 - blast disease, TO:0000734 - grain length, TO:0006032 - panicle size, TO:0000696 - starch content, TO:0000053 - pollen sterility, TO:0000187 - anther color, TO:0000342 - panicle axis angle, TO:0000447 - filled grain number, TO:0000485 - sterility related trait, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000371 - yield trait","PO:0001170 - seed development stage , PO:0001007 - pollen development stage ","Os01g0507000","LOC_Os01g32259.1",null,null,"Os02g0134200",0,-1.2308279,null,"BPH1","Bph1","BROWN PLANTHOPPER RESISTANCE 1","brown planthopper resistance 1, Brown planthopper resistance-1",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os08g0250900","Os02g0663800","Os11g0167800",0,2.2365227,null,"qTNSP-5","qTNSP-5","total number of spikelets per panicle (QTL)-5","total number of spikelets per panicle (QTL)-5",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0703500","LOC_Os06g49010",2.0117123,"Os03g0102700","LOC_Os03g01270",0,3.442166,{"$nulls":10},"Os03g0731100","Os02g0574100","Os06g0118700","Os06g0118700",7.3395557,7.5530396,null,"Os09g0556700",5.035236,"Os08g0448100",-1.7653023,{"$nulls":17},"Os06g0661800",0,1.7923781,{"$nulls":9},"AMTR1","Osh36, OsH36, H36, OsAMTR1","AMINOTRANSFERASE 1","alanine:glyoxylate aminotransferase-like protein, aminotransferase 1",5," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009749 - response to glucose stimulus, GO:0080134 - regulation of response to stress, GO:0009737 - response to abscisic acid stimulus, GO:0008483 - transaminase activity, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0030170 - pyridoxal phosphate binding, GO:0009646 - response to absence of light, GO:0006979 - response to oxidative stress, GO:0008152 - metabolic process, GO:0010150 - leaf senescence","TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000460 - light intensity sensitivity","PO:0001054 - 4 leaf senescence stage ","Os05g0475400","LOC_Os05g39770.2, LOC_Os05g39770.1",null,null,"Os04g0282400","Os01g0856500",1.1745979,0,null,"REY(K2)","OsPFKB1, PFKB1","REVERTIBLE EARLY YELLOWING KITAAKE 2","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0008443 - phosphofructokinase activity, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0019200 - carbohydrate kinase activity","TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os10g0573000","LOC_Os10g42240.2, LOC_Os10g42240.1",{"$nulls":6},"HSFA9","HSfA9, OsHsfA9, OsHsf-09, rHsf8, HSF09, OsHSF9, HSF9, HSF8, OsHsfA8, HsfA8","HEAT STRESS TRANSCRIPTION FACTOR A9","Heat stress transcription factor A9, Heat stress transcription factor A-9, Heat stress transcription factor 9, Heat stress transcription factor 8",3," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0005737 - cytoplasm, GO:0006950 - response to stress, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005829 - cytosol, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os03g0224700","LOC_Os03g12370.4, LOC_Os03g12370.3, LOC_Os03g12370.2, LOC_Os03g12370.1",null,null,"Os02g0673700",1.456047,-1.2354975,null,"BPH10","Bph10(t)*, Bph10","BROWN PLANTHOPPER RESISTANCE 10","brown planthopper resistance 10*, Brown planthopper resistance-10",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",null,null,"Os08g0440300","Os03g0669000","Os03g0673800",0,2.217145,null,"qTNSP-6","qTNSP-6","total number of spikelets per panicle (QTL)-6","total number of spikelets per panicle (QTL)-6",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0684700","LOC_Os03g48030",2.0154927,"Os03g0118600","LOC_Os03g02690",0,5.2110105,{"$nulls":10},"Os05g0292800","Os12g0131100","Os06g0624900","Os06g0624900",-1.6970464,-1.2052364,null,"Os04g0454200",5.0336294,"Os04g0598900",-1.7638403,{"$nulls":17},"Os01g0750300",6.3130035,5.462513,{"$nulls":9},"_","Osl2, l2","_","aminotransferase, pyruvate-dependent GABA transaminase",4," Biochemical character,  Vegetative organ - Leaf","GO:0005739 - mitochondrion, GO:0030170 - pyridoxal phosphate binding, GO:0010150 - leaf senescence, GO:0009737 - response to abscisic acid stimulus, GO:0008152 - metabolic process, GO:0008483 - transaminase activity, GO:0009749 - response to glucose stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os04g0614600","LOC_Os04g52450.2, LOC_Os04g52450.1",null,null,"Os07g0529000","Os05g0207500",1.1615924,0,null,"NPF6.1","OsNPF6.1","NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 6.1","NRT1/PTR family protein 6.1",1," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0022857 - transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0015333 - peptide:hydrogen symporter activity, GO:0016021 - integral to membrane, GO:0006857 - oligopeptide transport, GO:0042128 - nitrate assimilation","TO:0000371 - yield trait, TO:0000011 - nitrogen sensitivity, TO:0001032 - relative panicle number",null,"Os01g0103100","LOC_Os01g01360.1",{"$nulls":6},"C3H50","OsC3H50, OsTZF6, OsCCCH-Zn-6, DLN188, OsDLN188","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 50","Zinc finger CCCH domain-containing protein 50, Protein ZF, Tandem zinc finger protein 6, DLN repressor 188, DLN motif protein 188",7," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os07g0568300","LOC_Os07g38090.2, LOC_Os07g38090.1",null,null,"Os08g0189900",0,-1.2424258,null,"HBV","Hbv","HOJA BLANCA RESISTANCE","Hoja blanca resistance",12," Tolerance and resistance - Disease resistance","GO:0009615 - response to virus","TO:0000147 - rice hoja blanca disease resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os03g0792500","Os02g0220500","Os05g0554000",4.227717,2.2158854,null,"qTNSP-7","qTNSP-7","total number of spikelets per panicle (QTL)-7","total number of spikelets per panicle (QTL)-7",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0525600","LOC_Os11g32260",2.0368564,"Os03g0126300","LOC_Os03g03470",0,2.1885755,{"$nulls":10},"Os10g0516100","Os08g0499300","Os12g0189300","Os12g0189300",1.9949931,3.295161,null,"Os11g0708100",5.032804,"Os02g0802500",-1.7631084,{"$nulls":17},"Os01g0113200",1.5442066,1.2218553,{"$nulls":9},"KAT1","OsI57, I57, OsKAT1","3-KETOACYL-COA THIOLASE 1","3-ketoacyl-CoA thiolase, 3-ketoacyl-CoA thiolase-like protein",2," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010111 - glyoxysome organization, GO:0005739 - mitochondrion, GO:0005730 - nucleolus, GO:0005777 - peroxisome, GO:0005773 - vacuole, GO:0010150 - leaf senescence, GO:0003988 - acetyl-CoA C-acyltransferase activity, GO:0009507 - chloroplast, GO:0005886 - plasma membrane, GO:0005829 - cytosol","TO:0000249 - leaf senescence, TO:0000432 - temperature response trait","PO:0001054 - 4 leaf senescence stage ","Os02g0817700","LOC_Os02g57260.1",null,null,"Os10g0467800","Os01g0678500",1.157255,0,null,"RBG1","OsRBG1","RICE BIG GRAIN 1","Rice Big Grain 1",11," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0009408 - response to heat, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009628 - response to abiotic stimulus, GO:0080050 - regulation of seed development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress","TO:0000276 - drought tolerance, TO:0000168 - abiotic stress trait, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000656 - root development trait, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000227 - root length, TO:0000592 - 1000-dehulled grain weight, TO:0000146 - seed length, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000145 - internode length, TO:0000128 - harvest index","PO:0001170 - seed development stage , PO:0007518 - crown root emergence stage , PO:0007520 - root development stage , PO:0004010 - meristematic cell ","Os11g0497350","LOC_Os11g30430.1",{"$nulls":6},"LGC2",null,"LOW GLUTELIN CONTENT 2",null,2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",{"$nulls":6},"Os01g0685400",1.7438254,-1.3034965,null,"IPI","IPi(t)*, IPi. Rmg56","PYRICULARIA ORYZAE RESISTANCE","Pyricularia oryzae resistance, Magnaporthe grisea resistance, Blast resistance",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os01g0933200","Os01g0329800","Os05g0272800",3.0277631,2.2053874,null,"qTNSP-9","qTNSP-9","total number of spikelets per panicle (QTL)-9","total number of spikelets per panicle (QTL)-9",9," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0510600","LOC_Os02g30650",2.0547333,"Os03g0243700","LOC_Os03g14010",0,2.6563866,{"$nulls":10},"Os02g0750200","Os02g0733500","Os12g0197500","Os12g0197500",1.4194412,1.5788475,null,"Os10g0317900",5.0300117,"Os05g0130300",-1.7590485,{"$nulls":17},"Os07g0556200",0,2.058778,{"$nulls":9},"_","OsUXS2, UXS-2, Osl381, l381","_","dTDP-glucose 4-6-dehydratase-like protein, UDP-xylose synthase 2, UDP-glucuronic acid decarboxylase 2",1," Biochemical character,  Vegetative organ - Leaf","GO:0048040 - UDP-glucuronate decarboxylase activity, GO:0050662 - coenzyme binding, GO:0042732 - D-xylose metabolic process, GO:0044237 - cellular metabolic process, GO:0005886 - plasma membrane, GO:0005773 - vacuole, GO:0000139 - Golgi membrane, GO:0010150 - leaf senescence, GO:0010416 - arabinoxylan metabolic process, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os01g0315800","LOC_Os01g21320.1",null,null,"Os01g0750300","Os06g0713800",1.1527869,0,null,"_","OspPLAIIIalpha, pPLAIIIalpha","_","Patatin-related phospholipase A III alpha",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits","GO:0009739 - response to gibberellin stimulus, GO:0008112 - nicotinamide N-methyltransferase activity, GO:0080113 - regulation of seed growth, GO:0080112 - seed growth, GO:0048366 - leaf development, GO:0016042 - lipid catabolic process, GO:0016787 - hydrolase activity, GO:0030244 - cellulose biosynthetic process","TO:0000040 - panicle length, TO:0000135 - leaf length, TO:0000166 - gibberellic acid sensitivity, TO:0000146 - seed length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000227 - root length, TO:0000655 - leaf development trait, TO:0000653 - seed development trait","PO:0007030 - seedling shoot emergence stage ","Os03g0254400 ","LOC_Os03g14950.1",{"$nulls":6},"KNAT7","HOS66, HB365, OsKNAT7","KNOTTED ARABIDOPSIS THALIANA 7","HOMEOBOX ORYZA SATIVA 66, Homeobox protein knotted-1-like 3, Homeobox protein HOS66, KNOTTED ARABIDOPSIS THALIANA7, KNOX ARABIDOPSIS THALIANA7",3," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0010229 - inflorescence development, GO:0009664 - plant-type cell wall organization, GO:0009809 - lignin biosynthetic process, GO:0080006 - internode patterning, GO:0001558 - regulation of cell growth, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009834 - secondary cell wall biogenesis","TO:0000731 - lignin content, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000621 - inflorescence development trait, TO:0000068 - lodging incidence","PO:0001083 - inflorescence development stage ","Os03g0123500","LOC_Os03g03164.3, LOC_Os03g03164.2, LOC_Os03g03164.1",null,null,"Os02g0683500",0,-1.3406903,null,"IPI3","IPi3(t)*, IPi3, Rmg57","PYRICULARIA ORYZAE RESISTANCE","Pyricularia oryzae resistance, Magnaporthe grisea resistance, Blast resistance",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000469 - days to maturity, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os05g0556900","Os08g0126300","Os09g0451000",0,2.1812222,null,"qTGWT-1-1","qTGWT-1-1","1000-grain weight (QTL)-1-1","1000-grain weight (QTL)-1-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0445700","LOC_Os04g36800",2.0806143,"Os03g0243900","LOC_Os03g14030",0,5.939701,{"$nulls":10},"Os09g0535000","Os02g0704000","Os08g0471800","Os08g0471800",4.177091,3.6115944,null,"Os02g0236800",5.022431,"Os01g0864200",-1.7539033,{"$nulls":17},"Os05g0349700",2.3802779,2.0641327,{"$nulls":9},"CCC1","Os CCC1, OsCCC1, OsLAT9","CATION-CHLORIDE COTRANSPORTER 1","cation-Cl- cotransporter 1, cation-chloride cotransporter 1, cation-chloride co-transporter",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0008511 - sodium:potassium:chloride symporter activity, GO:0055078 - sodium ion homeostasis, GO:0009826 - unidimensional cell growth, GO:0055075 - potassium ion homeostasis, GO:0030104 - water homeostasis, GO:0008361 - regulation of cell size, GO:0055064 - chloride ion homeostasis, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane","TO:0000371 - yield trait, TO:0000068 - lodging incidence, TO:0000145 - internode length, TO:0000339 - stem thickness, TO:0000051 - stem strength, TO:0000207 - plant height, TO:0000526 - sodium concentration, TO:0000432 - temperature response trait, TO:0000513 - potassium concentration, TO:0000576 - stem length, TO:0000370 - leaf width, TO:0000227 - root length, TO:0006001 - salt tolerance","PO:0020104 - leaf sheath , PO:0000025 - root tip ","Os08g0323700","LOC_Os08g23440.1",null,null,"Os11g0490600","Os10g0562700",1.1526028,0,null,"LP1","OsREM5.3, REM5.3, OsLP1","LONG PANICLE 1 ","Remorin 5.3, remorin group 5 member 3, remorin family protein LP1",9," Reproductive organ - panicle",null,"TO:0000040 - panicle length",null,"Os09g0456100","LOC_Os09g28300.1, LOC_Os09g28300.2",{"$nulls":6},"BT1-1","OsBT1-1, OsEnS-29, OsBT1, OsBt1, BT1, Bt1, OsBt1-1, shr3, OsBT1-2, BT1-2","BRITTLE 1-1","Brittle-1-1, endosperm-specific gene 29, BRITTLE1, shrunken3",2," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances","GO:0010162 - seed dormancy, GO:0005982 - starch metabolic process, GO:0022891 - substrate-specific transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0005975 - carbohydrate metabolic process, GO:0015711 - organic anion transport, GO:0055085 - transmembrane transport, GO:0010581 - regulation of starch biosynthetic process, GO:0006412 - translation, GO:0019252 - starch biosynthetic process, GO:0003735 - structural constituent of ribosome, GO:0009660 - amyloplast organization, GO:0010021 - amylopectin biosynthetic process, GO:0033097 - amyloplast membrane","TO:0000487 - endosperm color, TO:0000100 - shrunken endosperm, TO:0002658 - starch grain synthesis, TO:0000696 - starch content, TO:0000253 - seed dormancy, TO:0000196 - amylose content, TO:0000382 - 1000-seed weight","PO:0009089 - endosperm ","Os02g0202400","LOC_Os02g10800.3, LOC_Os02g10800.2, LOC_Os02g10800.1",null,null,"Os02g0244700",-1.6086735,-1.3553886,null,"PITA","Pita, Pita (sl, Pi4a, Pi-ta), Pita2, Pi4a, Pita, Pi-ta, Pita-2, Pi-ta2, Pi-4(t), Pi-4, Pi4, Pi-4a(t), OsTRXh6, TRXh6, OsTrx30","PYRICULARIA ORYZAE RESISTANCE TA","Pyricularia oryzae resistance-ta, Magnaporthe grisea resistance-ta, Blast resistance ta, Thioredoxin H-type 6, H-type Thioredoxin 6, Thioredoxin 30",12," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0006662 - glycerol ether metabolic process, GO:0022900 - electron transport chain, GO:0045454 - cell redox homeostasis, GO:0009055 - electron carrier activity, GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0005524 - ATP binding, GO:0006915 - apoptosis, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009536 - plastid, GO:0009620 - response to fungus","TO:0000521 - stomatal closure time, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ","Os12g0281300","LOC_Os12g18360.2, LOC_Os12g18360.1","Os03g0787000","Os01g0871200","Os12g0263000",2.0778656,2.1643085,null,"qTGWT-2-2(t)","qTGWT-2-2(t)","1000-grain weight (QTL)-2-2(t)","1000-grain weight (QTL)-2-2(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0532900","LOC_Os09g36250",2.1058097,"Os03g0271500","LOC_Os03g16470",0,2.849537,{"$nulls":10},"Os02g0744900","Os02g0601300","Os09g0423500","Os09g0423500",3.0806415,2.8926609,null,"Os04g0382400",5.0101733,"Os01g0959750",-1.7513604,{"$nulls":17},"Os02g0110200",0,3.3673182,{"$nulls":9},"BZIP72","OsbZIP72, OsAREB2, OsABF4, Osbzip72, OsABI5, ABI5","b-ZIP TRANSCRIPTION FACTOR 72","b-ZIP transcription factor 72, AREB/ABF-family protein 2",9," Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009738 - abscisic acid mediated signaling, GO:0010150 - leaf senescence, GO:0010029 - regulation of seed germination, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000249 - leaf senescence","PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage ","Os09g0456200","LOC_Os09g28310.1",null,null,"Os12g0541300","Os01g0574600",1.1469933,0,null,"F3H1","OsF3H-1, F3H-1, OsF3H1, OsF3H, F3H","FLAVANONE 3-HYDROXYLASE 1","Flavanone 3-hydroxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Character as QTL - Yield and productivity","GO:0009718 - anthocyanin biosynthetic process, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0045486 - naringenin 3-dioxygenase activity, GO:0010224 - response to UV-B, GO:0002213 - defense response to insect, GO:0009698 - phenylpropanoid metabolic process, GO:0016491 - oxidoreductase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0051555 - flavonol biosynthetic process","TO:0000328 - sucrose content, TO:0000205 - white-backed planthopper resistance, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0000290 - flavonoid content, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color, TO:0000180 - spikelet fertility",null,"Os04g0662600","LOC_Os04g56700.1",{"$nulls":6},"SH-H","sh-h, OsCPL1","SHATTERING-H","carboxy-terminal domain phosphatase-like 1",7," Seed - Physiological traits - Shattering",{"$nulls":3},"Os07g0207700","LOC_Os07g10690.1, LOC_Os07g10690.2, LOC_Os07g10690.3, LOC_Os07g10690.4, LOC_Os07g10690.6, LOC_Os07g10690.7, LOC_Os07g10690.8",null,null,"Os04g0652400",-3.14538,-1.3742207,null,"PI12","Pi12(t), Pi12(t)*, Pi12, Pi-12(t)","PYRICULARIA ORYZAE RESISTANCE 12","Magnaporthe grisea resistance-12, Blast resistance 12",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000485 - sterility related trait, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os01g0542700","Os04g0600300","Os03g0337600",0,2.157176,null,"qTGWT-3-1(t)","qTGWT-3-1(t)","1000-grain weight (QTL)-3-1(t)","1000-grain weight (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0481800","LOC_Os09g30410",2.126032,"Os03g0277000","LOC_Os03g16900",0,2.2104716,{"$nulls":10},"Os05g0496200","Os02g0632500","Os07g0481000","Os07g0481000",1.8391976,1.2245995,null,"Os05g0153000",4.9982343,"Os01g0952800",-1.7507919,{"$nulls":17},"Os10g0150600",0,2.3875122,{"$nulls":9},"LEA7","OsLEA7, OsLEA7a, OsLEA7b, OsLEA7c","LATE EMBRYOGENESIS ABUNDANT PROTEIN 7","late embryogenesis abundant protein 7",3," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0080112 - seed growth, GO:0080113 - regulation of seed growth, GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0009269 - response to desiccation, GO:0048366 - leaf development","TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000180 - spikelet fertility",null,"Os03g0843300","LOC_Os03g62620.2, LOC_Os03g62620.3, LOC_Os03g62620.4",null,null,"Os01g0914400","Os10g0556200",1.1279386,0,null,"RLCK103","GUDK, OsRLCK103","RECEPTOR-LIKE CYTOPLASMIC KINASE 103","GROWTH UNDER DROUGHT KINASE, Receptor-like Cytoplasmic Kinase 103",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0179400","LOC_Os03g08170.1",{"$nulls":6},"qSH3",null,"Shattering (QTL)-3",null,3," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering",{"$nulls":5},"Os03g0643300",-2.851637,-1.3771795,null,"PI157","Pi157*, Pi157(t)*, Pi-157, Pi157","PYRICULARIA ORYZAE RESISTANCE 157","Pyricularia oryzae resistance in Moroberekan, Magnaporthe grisea resistance from Moroberekan, Blast resistance",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000480 - nutrient sensitivity, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os02g0540700","Os08g0250900","Os06g0326400",2.01738,2.1571176,null,"qTGWT-3-2(t)","qTGWT-3-2(t)","1000-grain weight (QTL)-3-2(t)","1000-grain weight (QTL)-3-2(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0135700","LOC_Os03g04310",2.1326425,"Os03g0304800","LOC_Os03g19220",0,4.6029663,{"$nulls":10},"Os01g0805300","Os01g0215500","Os02g0782100","Os02g0782100",-1.2892442,-1.1639978,null,"Os10g0550500",4.9869304,"Os08g0320500",-1.7390229,{"$nulls":17},"Os02g0236800",5.022431,3.900514,{"$nulls":9},"ILA1","OsILA1, OsACTPK4, ACTPK4, OsMAPKKK43, MAPKKK43","INCREASED LEAF ANGLE 1","increased leaf angle1, ACT domain containing protein kinase 4, MAPK kinase kinase 43",6," Biochemical character,  Vegetative organ - Leaf","GO:0005524 - ATP binding, GO:0009733 - response to auxin stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0005829 - cytosol, GO:0009834 - secondary cell wall biogenesis, GO:0009734 - auxin mediated signaling pathway","TO:0000731 - lignin content, TO:0000163 - auxin sensitivity, TO:0000124 - flag leaf angle, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os06g0724900","LOC_Os06g50920.1",null,null,"Os03g0123500","Os03g0128700",1.119038,0,null,"CEP5","OsCEP5, OsCEP14, CEP14","C-TERMINALLY ENCODED PEPTIDE 5","C-terminally encoded peptide 14",9," Reproductive organ - panicle",null,null,"PO:0009049 - inflorescence ",null,"LOC_Os09g28780",{"$nulls":6},"SH4","sh4, SH4, SHAT2, SHA1, qSH4, OsSh4, Sh4, Osh4, OsMSL23, MSL23","SHATTERING 4","grain shattering quantitative trait locus on chromosome 4, SHATTERING ABORTION2, shattering abortion 2, shattering 4, Shattering1, Myb/SANT-LIKE 23",4," Seed - Physiological traits - Shattering","GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0000473 - grain shattering","PO:0009047 - stem , PO:0025034 - leaf ","Os04g0670900","LOC_Os04g57530.1",null,null,"Os04g0683700",0,-1.505579,null,"PI19","Pi19(t), Pi14, Pi19","PYRICULARIA ORYZAE RESISTANCE 19","Pyricularia oryzae resistance 19, Magnaporthe grisea resistance-19, Blast resistance 19",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000494 - pigment content, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os12g0162100","Os08g0440300","Os05g0103200",2.04943,2.154865,null,"qTGWT-4-1(t) (qTGWT-4)","qTGWT-4-1(t) (qTGWT-4)","1000-grain weight (QTL)-4-1(t)","1000-grain weight (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0107700","LOC_Os06g01850",2.1411397,"Os03g0314400","LOC_Os03g19980",0,-1.3869253,{"$nulls":10},"Os02g0578400","Os01g0952800","Os06g0610800","Os06g0610800",3.1316576,4.0232925,null,"Os01g0875300",4.9666185,"Os07g0150700",-1.7380567,{"$nulls":17},"Os03g0243700",0,2.6563866,{"$nulls":9},"IIP3","OsIIP3","ILA1 INTERACTING PROTEIN 3","ILA1 interacting protein 3",2," Vegetative organ - Leaf",null,"TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle",null,"Os02g0575700 ","LOC_Os02g36590.1, LOC_Os02g36590.2, LOC_Os02g36590.3, LOC_Os02g36595.1",null,null,"Os08g0460000","Os01g0719100",1.119002,0,null,"CEP6","OsCEP6, OsCEP6.1, CEP6.1, OsCEP13, CEP13","C-TERMINALLY ENCODED PEPTIDE 6","C-terminally encoded peptide 13",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0080050 - regulation of seed development, GO:0048364 - root development, GO:0010229 - inflorescence development, GO:0048831 - regulation of shoot development, GO:0008361 - regulation of cell size, GO:0009414 - response to water deprivation, GO:0006995 - cellular response to nitrogen starvation, GO:0046686 - response to cadmium ion","TO:0000654 - shoot development trait, TO:0000402 - grain width, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000382 - 1000-seed weight, TO:0000149 - seed width, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000734 - grain length","PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os08g0475500","LOC_Os08g37070.1",{"$nulls":6},"LOX2","LOX-2","LIPOXYGENASE 2",null,null," Seed - Physiological traits - Taste","GO:0055114 - oxidation reduction, GO:0005506 - iron ion binding, GO:0051707 - response to other organism, GO:0009611 - response to wounding, GO:0031408 - oxylipin biosynthetic process, GO:0005737 - cytoplasm, GO:0016165 - lipoxygenase activity",{"$nulls":6},"Os01g0114300",-1.6340421,-1.5384606,null,"PI20","Pi20, Pi20(t)","PYRICULARIA ORYZAE RESISTANCE 20","Pyricularia oryzae resistance 20, Magnaporthe grisea resistance-20, Blast resistance 20",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000495 - chlorophyll content","PO:0009025 - vascular leaf ",null,null,"Os01g0852200","Os03g0792500","Os11g0134700",0,2.1503115,null,"qTGWT-5-1(t) (qTGWT-5)","qTGWT-5-1(t) (qTGWT-5)","1000-grain weight (QTL)-5-1(t)","1000-grain weight (QTL)-5-1(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0430200","LOC_Os04g35100",2.148569,"Os03g0356300","LOC_Os03g24020",0,2.9967391,{"$nulls":10},"Os09g0439500","Os02g0247800","Os10g0488100","Os10g0488100",-1.4124676,-1.0586424,null,"Os01g0273800",4.9486427,"Os01g0364800",-1.7365016,{"$nulls":17},"Os06g0571800",1.420514,3.0469806,{"$nulls":9},"MYB11","OsMyb11, Myb11, OsMYB60, MYB60","TRANSCRIPTION FACTOR MYB11","myb transcription factor 11, transcription factor MYB11",12," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Other","GO:0009723 - response to ethylene stimulus, GO:0010118 - stomatal movement, GO:0009733 - response to auxin stimulus, GO:0048366 - leaf development, GO:0042761 - very-long-chain fatty acid biosynthetic process, GO:0009626 - plant-type hypersensitive response, GO:0009737 - response to abscisic acid stimulus, GO:0009416 - response to light stimulus, GO:0009965 - leaf morphogenesis, GO:0030912 - response to deep water, GO:0046686 - response to cadmium ion, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0003677 - DNA binding, GO:0009617 - response to bacterium, GO:0009414 - response to water deprivation","TO:0000075 - light sensitivity, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0001050 - leaf development stage ","Os12g0125000","LOC_Os12g03150.1",null,null,"Os09g0510500","Os02g0618200",1.116649,0,null,"RLCK3","OsRLCK3","RECEPTOR-LIKE CYTOPLASMIC KINASE 3","Receptor-like Cytoplasmic Kinase 3",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0048316 - seed development","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0113300","LOC_Os01g02300.1",{"$nulls":6},"LOX1","LOX-1","LIPOXYGENASE 1",null,null," Seed - Physiological traits - Taste","GO:0031408 - oxylipin biosynthetic process, GO:0016165 - lipoxygenase activity, GO:0005506 - iron ion binding, GO:0055114 - oxidation reduction",{"$nulls":6},"Os04g0573900",-1.9732274,-1.538496,null,"PI6","Pi6(t)*, Pi6, Pi-6(t), pi6(t)","PYRICULARIA ORYZAE RESISTANCE 6","Pyricularia oryzae resistance 6, Magnaporthe grisea resistance-6, Blast resistance 6",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000503 - leaf rolling time, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os10g0527800","Os01g0933200","Os10g0567400",0,2.1365983,null,"qTGWT-6-1(t) (qTGWT-6)","qTGWT-6-1(t) (qTGWT-6)","1000-grain weight (QTL)-6-1(t)","1000-grain weight (QTL)-6-1(t)",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0103200","LOC_Os05g01270",2.154865,"Os03g0359600","LOC_Os03g24510",0,3.041989,{"$nulls":10},"Os04g0412200","Os04g0600300","Os03g0120200","Os03g0120200",1.8470777,2.2569926,null,"Os02g0702600",4.939876,"Os04g0600000",-1.7341932,{"$nulls":17},"Os05g0211100",0,1.6188742,{"$nulls":9},"_","OsMyb7, Myb7, OsMYB102, MYB102","_","myb transcription factor 7, transcription factor MYB7",7," Vegetative organ - Leaf,  Coloration,  Other","GO:0003677 - DNA binding, GO:0009964 - negative regulation of flavonoid biosynthetic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence",null,"Os07g0558100","LOC_Os07g37210.1",null,null,"Os03g0819600","Os04g0566500",1.0733117,0,null,"RLCK5","OsRLCK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 5","Receptor-like Cytoplasmic Kinase 5",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity","TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000255 - sheath blight disease resistance","PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os01g0114100","LOC_Os01g02390.2, LOC_Os01g02390.1",{"$nulls":6},"EMF1","OsEMF1","EMBRYONIC FLOWER 1",null,1," Seed - Morphological traits - Embryo","GO:0048573 - photoperiodism, flowering",{"$nulls":6},"Os04g0490500",0,-1.5664234,null,"PI62","Pi62(t)*(=Pita?), Pi62(t)*, Pi62, Pi62(t), Pi-62(t)","PYRICULARIA ORYZAE RESISTANCE 62","Pyricularia oryzae resistance from Yashiro-mochi, Magnaporthe grisea resistance from Yashiro-mochi, Magnaporthe grisea resistance-62, Blast resistance 62",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000479 - acid sensitivity","PO:0009025 - vascular leaf ",null,null,"Os01g0114300","Os05g0556900","Os03g0135700",5.4800797,2.1326425,null,"qTGWT-10-1(t) (qTGWT-10)","qTGWT-10-1(t) (qTGWT-10)","1000-grain weight (QTL)-10-1(t)","1000-grain weight (QTL)-10-1(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0132800","LOC_Os12g03860",2.1567156,"Os03g0421800","LOC_Os03g30830",0,2.3464868,{"$nulls":10},"Os08g0104600","Os07g0568300","Os02g0208900","Os02g0208900",1.2093801,-1.0023584,null,"Os04g0249600",4.935286,"Os08g0132100",-1.7320153,{"$nulls":17},"Os03g0782500",0,1.688983,{"$nulls":9},"YGL98","OsChlD, ChlD, CHLD, OsCHLD, Ygl7, YGL3","YELLOW-GREEN LEAF 98","magnesium chelatase subunit ChlD, magnesium-chelatase ChlD subunit, yellow-green leaf mutant 98, yellow-green leaf 7, magnesium-chelatase ChlD protein, MgCh D subunit, D-subunit of Mg-chelatase, Mg-chelatase D subunit, yellow green leaf3, yellow green leaf 3",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0009658 - chloroplast organization, GO:0017111 - nucleoside-triphosphatase activity, GO:0009637 - response to blue light, GO:0009507 - chloroplast, GO:0005524 - ATP binding, GO:0016851 - magnesium chelatase activity, GO:0015995 - chlorophyll biosynthetic process, GO:0015979 - photosynthesis","TO:0000159 - blue light sensitivity, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait","PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os03g0811100","LOC_Os03g59640.1",null,null,"Os05g0563000","Os02g0116600",1.0241575,0,null,"RLCK6","OsRLCK6","RECEPTOR-LIKE CYTOPLASMIC KINASE 6","Receptor-like Cytoplasmic Kinase 6",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0114300","LOC_Os01g02400.1, LOC_Os01g02400.2, LOC_Os01g02400.3",{"$nulls":6},"BU1","ILI4, OsILI4, OsBU1, BU1/ILI4, OsbHLH172, bHLH172","BRASSINOSTEROID UPREGULATED 1","BRASSINOSTEROID UPREGULATED1, Increased Leaf Inclination4, BR upregulated 1, basic helix-loop-helix protein 172",6," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0005737 - cytoplasm, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0040008 - regulation of growth, GO:0046983 - protein dimerization activity, GO:0009723 - response to ethylene stimulus","TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002677 - brassinosteroid sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000172 - jasmonic acid sensitivity, TO:0000734 - grain length, TO:0000173 - ethylene sensitivity","PO:0005052 - plant callus ","Os06g0226500","LOC_Os06g12210.1",null,null,"Os12g0155000",0,-1.603726,null,"SPL1","Spl1, spl1(sl,bl2), sl, bl2, spl1","SPOTTED LEAF 1","spotted leaf1, spotted leaf 1, spotted leaf-1",12," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000069 - variegated leaf, TO:0000063 - mimic response","PO:0009025 - vascular leaf ",null,null,"Os11g0490900","Os03g0787000","Os05g0406800",5.145809,2.1089206,null,"qGYD-2 (GYD-2)","qGYD-2 (GYD-2)","grain yield per plant (QTL)-2","grain yield per plant (QTL)-2",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0817100","LOC_Os03g60250",2.172726,"Os03g0582000","LOC_Os03g38540",0,4.2610555,{"$nulls":10},"Os07g0562700","Os04g0509600","Os10g0396300","Os10g0396300",1.8787161,0.97349644,null,"Os05g0556400",4.9319777,"Os11g0153500",-1.7294817,{"$nulls":17},"Os09g0346500",0,3.3939323,{"$nulls":9},"YAB3","OsYAB3, OsYAB4, TOB3","YABBY3","YABBY 3, OsYABBY3, Os YABBY3, TONGARI-BOUSHI 3, TONGARI-BOUSHI3",10," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0010158 - abaxial cell fate specification, GO:0046872 - metal ion binding, GO:0010154 - fruit development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0025487 - bract primordium ","Os10g0508300","LOC_Os10g36420.1",null,null,"Os01g0118300","Os09g0114500",1.0101665,0,null,"RLCK28","OsRLCK28","RECEPTOR-LIKE CYTOPLASMIC KINASE 28","Receptor-like Cytoplasmic Kinase 28",1," Reproductive organ - panicle,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009409 - response to cold","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000303 - cold tolerance","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os01g0259200","LOC_Os01g15470.1, LOC_Os01g15470.2, LOC_Os01g15470.3",{"$nulls":6},"SDR4","Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k, OsSdr4L, Sdr4L","SEED DORMANCY 4","Sdr4-like",7," Seed - Physiological traits - Dormancy","GO:0009738 - abscisic acid mediated signaling, GO:0009845 - seed germination","TO:0000615 - abscisic acid sensitivity, TO:0000253 - seed dormancy, TO:0000619 - vivipary","PO:0009010 - seed ","Os07g0585700","LOC_Os07g39700.1",null,null,"Os10g0562100",-2.144032,-1.7148021,null,"NAL3","nal3(nal2), nal2, nal3, cul3, OsWOX3A, WOX3A, WOX3, OsWOX3, OsNS, OsNS1/OsNS2, OsPRS","NARROW LEAF 3","narrow leaf3, narrow leaf 3, narrow leaf-3, curl leaf-3, WUSCHEL related homeobox 3A, WUSCHEL-related homeobox 3, WUSCHEL-related homeobox 3A",12," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0009739 - response to gibberellin stimulus, GO:0010336 - gibberellic acid homeostasis, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0048366 - leaf development, GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000276 - drought tolerance, TO:0000370 - leaf width, TO:0000402 - grain width, TO:0000346 - tiller number, TO:0000492 - leaf shape, TO:0000149 - seed width, TO:0001013 - lateral root number, TO:0002675 - gibberellic acid content, TO:0000655 - leaf development trait, TO:0000166 - gibberellic acid sensitivity","PO:0009025 - vascular leaf , PO:0001050 - leaf development stage ","Os12g0101600","LOC_Os12g01120.1","Os07g0239400","Os01g0542700","Os04g0685900",2.1874247,2.0713534,null,"qGYD-6-2 (GDY-6-2)","qGYD-6-2 (GDY-6-2)","grain yield per plant (QTL)-6-2","grain yield per plant (QTL)-6-2",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0126300","LOC_Os03g03470",2.1885755,"Os03g0638200","LOC_Os03g43720",0,1.0119572,{"$nulls":10},"Os08g0276100","Os01g0176000","Os01g0720500","Os01g0720500",5.5040946,8.342963,null,"Os06g0699500",4.9297743,"Os01g0178900",-1.724074,{"$nulls":17},"Os04g0530900",0,2.4195888,{"$nulls":9},"KAT2","OsKAT2","SHAKER POTASSIUM CHANNEL 2","shaker potassium channel OsKAT2",1," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0005249 - voltage-gated potassium channel activity, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010118 - stomatal movement, GO:0016021 - integral to membrane, GO:0050891 - multicellular organismal water homeostasis, GO:0009644 - response to high light intensity, GO:0007623 - circadian rhythm","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0000293 - guard cell , PO:0009005 - root ","Os01g0210700","LOC_Os01g11250.1",null,null,"Os01g0600900","Os10g0555200",0.9937124,0,null,"RLCK39","OsRLCK39, OsUSP4, USP4","RECEPTOR-LIKE CYTOPLASMIC KINASE 39","Receptor-like Cytoplasmic Kinase 39, universal stress protein 4",1," Reproductive organ - panicle,  Seed","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0006950 - response to stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0581400","LOC_Os01g39970.1",{"$nulls":6},"SSG",null,"SUBSTANDARD STARCH GRAIN",null,null," Seed - Morphological traits - Endosperm",{"$nulls":7},"Os01g0184100",0,-1.986811,null,"PI","Pi(t)*, Pi(t)","PYRICULARIA ORYZAE RESISTANCE","Pyricularia oryzae resistance, Magnaporthe grisea resistance, Blast resistance",4," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000470 - vascular tissue related trait, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020141 - stem node ",null,null,"Os01g0955100","Os02g0540700","Os04g0469800",0,2.068486,null,"qGYD-7-3 (GYD-7-3)","qGYD-7-3 (GYD-7-3)","grain yield per plant (QTL)-7-3","grain yield per plant (QTL)-7-3",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0517900","LOC_Os07g33420",2.2067585,"Os03g0684700","LOC_Os03g48030",0,2.0154927,{"$nulls":10},"Os03g0563300","Os01g0685400","Os02g0197600","Os02g0197600",4.6723037,3.8901205,null,"Os03g0401300",4.925789,"Os03g0822700",-1.7211622,{"$nulls":17},"Os01g0866400",-3.1494305,2.356459,{"$nulls":9},"IG1","CRL1L3, OsCrll3, OsIG1, OsLBD1-9, LBD1-9, OsAS2, AS2","INDETERMINATE GAMETOPHYTE 1","Crl1-like 3, indeterminate gametophyte1, lateral organ boundaries domain 1-9, ASYMMETRIC LEAVES2, ASYMMETRIC LEAVES 2",1," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009553 - embryo sac development, GO:0048437 - floral organ development, GO:0009561 - megagametogenesis, GO:0005634 - nucleus, GO:0007275 - multicellular organismal development","TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000206 - leaf angle, TO:0006038 - floral organ number","PO:0004001 - bulliform cell , PO:0007621 - megagametophyte development stage , PO:0009038 - palea , PO:0009039 - glume , PO:0025279 - megagametophyte ","Os01g0889400","LOC_Os01g66590.1, LOC_Os01g66590.2, LOC_Os01g66590.3",null,null,"Os03g0416200","Os02g0768600",0.9773137,0,null,"RLCK40","OsRLCK40, PTK1, OsPTK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 40","Receptor-like Cytoplasmic Kinase 40, Protein Tyrosine Kinase 1",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0030912 - response to deep water, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding","TO:0000524 - submergence tolerance, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0009066 - anther , PO:0009030 - carpel , PO:0009051 - spikelet , PO:0000003 - whole plant , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0588500","LOC_Os01g40590.1",{"$nulls":6},"RDD1","OsDof2, OsDof9, Dof9, OsDof-9, DLN64, OsDLN64, OsDof8, Dof8","RICE DOF DAILY FLUCTUATIONS 1","Dof zinc factor 9, Dof transcription factor 9, DLN repressor 64, DLN motif protein 64",2," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000303 - cold tolerance","PO:0009005 - root ","Os02g0673700","LOC_Os02g45200.4, LOC_Os02g45200.3, LOC_Os02g45200.2, LOC_Os02g45200.1",null,null,"Os08g0190100",0,-2.0081575,null,"SHL2","shl2, SHL2, sh2, OsRDR6, RDR6","SHOOTLESS 2","shootless 2, shootless-2, Probable RNA-dependent RNA polymerase SHL2, Protein SHOOTLESS 2, SHOOTLESS2, RNA-dependent RNA polymerase 6, rod-like lemma",1," Vegetative organ - Shoot apical meristem(SAM),  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006306 - DNA methylation, GO:0042138 - meiotic DNA double-strand break formation, GO:0006950 - response to stress, GO:0009266 - response to temperature stimulus, GO:0003968 - RNA-directed RNA polymerase activity, GO:0009737 - response to abscisic acid stimulus, GO:0003723 - RNA binding, GO:0010492 - maintenance of shoot apical meristem identity, GO:0051607 - defense response to virus, GO:0031047 - gene silencing by RNA, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development, GO:0030422 - production of siRNA involved in RNA interference, GO:0016246 - RNA interference, GO:0005739 - mitochondrion","TO:0000485 - sterility related trait, TO:0002718 - awn anatomy and morphology trait, TO:0000615 - abscisic acid sensitivity, TO:0000274 - floret anatomy and morphology trait, TO:0000432 - temperature response trait, TO:0000064 - embryo related trait, TO:0000164 - stress trait, TO:0000148 - viral disease resistance","PO:0009009 - plant embryo , PO:0020144 - apical meristem ","Os01g0527600","LOC_Os01g34350.1","Os02g0706500","Os12g0162100","Os05g0349700",2.3802779,2.0641327,null,"qNP-1-1 (NP-1)","qNP-1-1 (NP-1)","number of panicles per plant (QTL)-1-1","number of panicles per plant (QTL)-1-1",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0277000","LOC_Os03g16900",2.2104716,"Os03g0701500","LOC_Os03g49480",0,3.5719688,{"$nulls":10},"Os02g0764500","Os04g0672100","Os04g0551200","Os04g0551200",4.201263,3.4666278,null,"Os06g0680700",4.9187603,"Os07g0124100",-1.7200141,{"$nulls":17},"Os04g0613700",0,1.5049185,{"$nulls":9},"PAL1","OsPAL1, PAL, OsPAL06, ZB8, pal/zb8, PAL06, rPAL-P5, ZB8PAL, OsPAL, OsPAL2, OsPAL4, PAL4, PAL/ZB8, OsPAL6, PAL6","PHENYLALANINE AMMONIA-LYASE 1","phenylalanine ammonia-lyase 1, phenylalanine ammonia lyase",2," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Seed - Morphological traits,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0002238 - response to molecule of fungal origin, GO:0006559 - L-phenylalanine catabolic process, GO:0042742 - defense response to bacterium, GO:0009800 - cinnamic acid biosynthetic process, GO:0010229 - inflorescence development, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0002237 - response to molecule of bacterial origin, GO:0009609 - response to symbiotic bacterium, GO:0010200 - response to chitin, GO:0009635 - response to herbicide, GO:0002213 - defense response to insect, GO:0009697 - salicylic acid biosynthetic process, GO:0046688 - response to copper ion, GO:0032355 - response to estradiol stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0050832 - defense response to fungus, GO:0009718 - anthocyanin biosynthetic process, GO:0010332 - response to gamma radiation, GO:0006952 - defense response, GO:0002215 - defense response to nematode, GO:0005737 - cytoplasm","TO:0000468 - leaf blast disease resistance, TO:0000664 - fungal blight disease resistance, TO:0000401 - plant growth hormone sensitivity, TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000674 - phytochemical compound content, TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000315 - bacterial disease resistance, TO:0000058 - herbicide sensitivity, TO:0000021 - copper sensitivity, TO:0000421 - pollen fertility, TO:0000605 - hydrogen peroxide content, TO:0000071 - anthocyanin content, TO:0000424 - brown planthopper resistance, TO:0000384 - nematode damage resistance, TO:0000326 - leaf color, TO:0000074 - blast disease","PO:0009005 - root , PO:0001083 - inflorescence development stage ","Os02g0627100","LOC_Os02g41680.1",null,null,"Os01g0323300","Os01g0885000",0.9633527,0,null,"RLCK45","OsRLCK45","RECEPTOR-LIKE CYTOPLASMIC KINASE 45","Receptor-like Cytoplasmic Kinase 45",1," Reproductive organ - panicle,  Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0789200","LOC_Os01g57940.1",{"$nulls":6},"RDD2","OsDof23, Dof23, OsDof-23, OsDof1, OsCDF3, CDF3, OsDof24, Dof24","RICE DOF DAILY FLUCTUATIONS 2","AOBP-like protein gene, Rdd1-like gene, DNA binding of the One Finger 1, DNA binding with one finger protein 1, Dof protein 1, CYCLING DOF FACTOR 3, Dof zinc factor 23, Dof transcription factor 23",7," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009620 - response to fungus, GO:0009266 - response to temperature stimulus, GO:0007623 - circadian rhythm, GO:0008270 - zinc ion binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010378 - temperature compensation of the circadian clock, GO:0009611 - response to wounding, GO:0003677 - DNA binding","TO:0000432 - temperature response trait, TO:0000074 - blast disease, TO:0000164 - stress trait",null,"Os07g0685000","LOC_Os07g48570.1",null,null,"Os03g0764900",-3.6407013,-2.1698039,null,"D61","d61*, dwf42, d61, OsBRI1, OSBRI1, BRI1, Os BRI1, Osbri1, OsBRKq1, BRKq1","DWARF 61","dm-type dwarf, dwarf-61, DWARF61, BRASSINOSTEROID INSENSITIVE 1, BR receptor BRASSINOSTEROID INSENSITIVE1, BRASSINOSTEROID-INSENSITIVE1, brassinosteroid insensitive 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0001578 - microtubule bundle formation, GO:0009741 - response to brassinosteroid stimulus, GO:0016049 - cell growth, GO:0004903 - growth hormone receptor activity, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006468 - protein amino acid phosphorylation, GO:0009647 - skotomorphogenesis, GO:0009753 - response to jasmonic acid stimulus, GO:0009729 - detection of brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus","TO:0000145 - internode length, TO:0000357 - growth and development trait, TO:0000085 - leaf rolling, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000040 - panicle length, TO:0000329 - tillering ability, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000255 - sheath blight disease resistance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0006347 - stem intercalary meristem , PO:0009047 - stem , PO:0020142 - stem internode , PO:0020104 - leaf sheath , PO:0020033 - coleoptile ","Os01g0718300","LOC_Os01g52050.1","Os02g0759400","Os01g0852200","Os07g0556200",0,2.058778,null,"qNP-2-1 (NP-2-1)","qNP-2-1 (NP-2-1)","number of panicles per plant (QTL)-2-1","number of panicles per plant (QTL)-2-1",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0548700","LOC_Os04g46350",2.2563107,"Os03g0725200","LOC_Os03g51530",0,-2.226667,{"$nulls":10},"Os03g0738400","Os05g0437200","Os10g0390600","Os10g0390600",4.0828304,3.8806279,null,"Os04g0384000",4.9163795,"Os05g0576700",-1.7193314,{"$nulls":17},"Os06g0662200",2.9997795,1.2566763,{"$nulls":9},"PLT2","OsPLT2, AP2/EREBP#060, AP2/EREBP60, HL6, OsHL6","PLETHORA 2","Plethora 2, APETALA2/ethylene-responsive element binding protein 60, Hairy Leaf 6",6," Vegetative organ - Leaf,  Other","GO:0003700 - transcription factor activity, GO:0010090 - trichome morphogenesis, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding",null,null,"Os06g0657500","LOC_Os06g44750.1",null,null,"Os11g0610900","Os03g0586900",-0.9504668,0,null,"RLCK46","OsRLCK46, OsMRLK5, MRLK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 46","Receptor-like Cytoplasmic Kinase 46, malectin/malectin-like receptor-like kinase 5",1," Reproductive organ - panicle,  Seed","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0810600","LOC_Os01g59560.1",{"$nulls":6},"RDD3","OsDof26, Dof26, OsDof-26, OsDof27, Dof27","RICE DOF DAILY FLUCTUATIONS 3","Dof zinc factor 26, Dof transcription factor 26",10," Seed,  Other","GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent",null,"PO:0009005 - root ","Os10g0406300","LOC_Os10g26620.1",null,null,"Os06g0133000",-1.9926609,-2.2645013,null,"GLH9","Glh9(t)*, Glh9","GREEN LEAFHOPPER RESISTANCE 9","Green leafhopper resistance-9(t), Green leafhopper resistance-9, Green leafhopper resistance 9",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os07g0186000","Os10g0527800","Os11g0610900",3.794843,2.055989,null,"qNP-2-2 (NP-2-2)","qNP-2-2 (NP-2-2)","number of panicles per plant (QTL)-2-2","number of panicles per plant (QTL)-2-2",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0711100","LOC_Os03g50310",2.263133,"Os03g0749500","LOC_Os03g53860",0,4.551239,{"$nulls":10},"Os03g0333400","Os03g0327100","Os01g0600900","Os01g0600900",4.0118365,3.538292,null,"Os05g0513800",4.915007,"Os04g0365100",-1.7192389,{"$nulls":17},"Os06g0695500",3.074114,2.9345798,{"$nulls":9},"IAA12","OsIAA12","_","Aux/IAA protein 12",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009734 - auxin mediated signaling pathway, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009629 - response to gravity, GO:0051510 - regulation of unidimensional cell growth, GO:0009733 - response to auxin stimulus","TO:0002693 - gravity response trait, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os03g0633800","LOC_Os03g43410.1",null,null,"Os02g0762600","Os07g0497100",-0.9551296,0,null,"RLCK52","OsRLCK52","RECEPTOR-LIKE CYTOPLASMIC KINASE 52","Receptor-like Cytoplasmic Kinase 52",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004713 - protein tyrosine kinase activity","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0899000","LOC_Os01g67340.1, LOC_Os01g67340.2, LOC_Os01g67340.3",{"$nulls":6},"RDD4","OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12, OsDof11, Dof11","RICE DOF DAILY FLUCTUATIONS 4","CYCLING DOF FACTOR 1, Dof zinc factor 12, Dof transcription factor 12",3," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0010378 - temperature compensation of the circadian clock, GO:0009266 - response to temperature stimulus, GO:0007623 - circadian rhythm, GO:0009414 - response to water deprivation, GO:0009646 - response to absence of light, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008270 - zinc ion binding","TO:0000460 - light intensity sensitivity, TO:0000432 - temperature response trait, TO:0000276 - drought tolerance","PO:0025034 - leaf ","Os03g0169600","LOC_Os03g07360.1",null,null,"Os10g0573900",-2.1658926,-2.732528,null,"GM5","Gm5*, Gm5","GALL MIDGE RESISTANCE 5","Gall midge resistance5, Gall midge resistance 5, Gall midge resistance-5",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0547600","Os01g0114300","Os03g0169700",0,2.0296562,null,"qNP-3-1 (NP-3-1)","qNP-3-1 (NP-3-1)","number of panicles per plant (QTL)-3-1","number of panicles per plant (QTL)-3-1",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0524500","LOC_Os01g34060",2.2737515,"Os03g0751400","LOC_Os03g54040",0,2.9028213,{"$nulls":10},"Os06g0107700","Os01g0871200","Os03g0592500","Os03g0592500",3.8585846,4.4201694,null,"Os11g0683500",4.9107556,"Os05g0194900",-1.7165629,{"$nulls":17},"Os02g0197600",4.6723037,3.8901205,{"$nulls":9},"CFL1","OsCFL1","CURLY FLAG LEAF 1","curly flag leaf1",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0042335 - cuticle development","TO:0002681 - leaf curling, TO:0000068 - lodging incidence, TO:0000085 - leaf rolling",null,"Os02g0516400","LOC_Os02g31140.1",null,null,"Os10g0163040","Os03g0329900",-0.98224515,0,null,"RLCK57","OsRLCK57","RECEPTOR-LIKE CYTOPLASMIC KINASE 57","Receptor-like Cytoplasmic Kinase 57",1," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0032494 - response to peptidoglycan, GO:0050832 - defense response to fungus, GO:0010229 - inflorescence development, GO:0009742 - brassinosteroid mediated signaling, GO:0004674 - protein serine/threonine kinase activity, GO:0009741 - response to brassinosteroid stimulus, GO:0002237 - response to molecule of bacterial origin, GO:0010200 - response to chitin, GO:0009651 - response to salt stress","TO:0000050 - inflorescence branching, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0973500","LOC_Os01g74200.1",{"$nulls":6},"SP3","OsDof15, Dof15, OsDof-15, DOF15","SHORT PANICLE 3","Dof zinc factor 15, Dof transcription factor 15, DNA BINDING WITH ONE FINGER 15, Short Panicle 3",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0048364 - root development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009690 - cytokinin metabolic process, GO:0009873 - ethylene mediated signaling pathway, GO:0008284 - positive regulation of cell proliferation, GO:0009651 - response to salt stress, GO:0010082 - regulation of root meristem growth, GO:0010081 - regulation of inflorescence meristem growth","TO:0000656 - root development trait, TO:0000557 - secondary branch number, TO:0002660 - cytokinin content, TO:0000434 - root activity, TO:0000371 - yield trait, TO:0000592 - 1000-dehulled grain weight, TO:0000373 - inflorescence anatomy and morphology trait, TO:0002692 - root meristem development, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0000227 - root length, TO:0000145 - internode length, TO:0000173 - ethylene sensitivity, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000734 - grain length, TO:0000050 - inflorescence branching, TO:0000456 - spikelet number, TO:0006032 - panicle size","PO:0009049 - inflorescence ","Os03g0764900 ","LOC_Os03g55610.1",{"$nulls":6},"GM6","Gm6(t), Gm6","GALL MIDGE RESISTANCE 6","Gall midge resistance6, Gall midge resistance 6, Gall midge resistance-6",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os06g0667100","Os11g0490900","Os04g0416400",1.2605988,2.0173132,null,"qNP-3-2 (NP-3-2)","qNP-3-2 (NP-3-2)","number of panicles per plant (QTL)-3-2","number of panicles per plant (QTL)-3-2",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0414700","LOC_Os08g31980",2.293911,"Os03g0782200","LOC_Os03g56930",0,2.6140633,{"$nulls":10},"Os12g0274700","Os08g0163800","Os04g0412200","Os04g0412200",3.5931473,2.7985,null,"Os02g0739900",4.9037075,"Os01g0904300",-1.7155517,{"$nulls":17},"Os11g0530600",3.9305646,4.57839,{"$nulls":9},"NGR5","ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, RLA1, RLA1/SMOS1, OsERF142/SMOS1, OsNGR5","NITROGEN-MEDIATED TILLER GROWTH RESPONSE 5","ethylene response factor 142, APETALA2/ethylene-responsive element binding protein 49, small organ size1, small organ size 1, SHOEBOX, shoebox, reduced leaf angle1, reduced leaf angle 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0016049 - cell growth, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009845 - seed germination, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006808 - regulation of nitrogen utilization","TO:0000163 - auxin sensitivity, TO:0002684 - plant cell size, TO:0001035 - stem width, TO:0002602 - pistil size, TO:0002601 - stamen size, TO:0000391 - seed size, TO:0000227 - root length, TO:0002637 - leaf size, TO:0000371 - yield trait, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0002677 - brassinosteroid sensitivity","PO:0007527 - 2 root meristem formation stage , PO:0006085 - root meristem , PO:0007057 - 0 seed germination stage ","Os05g0389000","LOC_Os05g32270.2, LOC_Os05g32270.1",null,null,"Os05g0555600","Os11g0544600",-0.98757154,0,null,"RLCK60","OsRLCK60","RECEPTOR-LIKE CYTOPLASMIC KINASE 60","Receptor-like Cytoplasmic Kinase 60",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0118200","LOC_Os02g02600.1",{"$nulls":6},"MKK3","OsMKK3, OsMAPKK3, MAPKK3, OsMEK8a, MEK8a","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3","MAPK kinase 3",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect, GO:0042542 - response to hydrogen peroxide, GO:2000033 - regulation of seed dormancy, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium","TO:0000615 - abscisic acid sensitivity, TO:0000253 - seed dormancy, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance",null,"Os06g0473200","LOC_Os06g27890.4, LOC_Os06g27890.3, LOC_Os06g27890.2, LOC_Os06g27890.1",{"$nulls":6},"GM7","Gm7*, Gm7","GALL MIDGE RESISTANCE 7","Gall midge resistance-7",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os03g0213100","Os07g0239400","Os06g0703500",1.0499412,2.0117123,null,"qNP-5-1 (NP-5)","qNP-5-1 (NP-5)","number of panicles per plant (QTL)-5-1","number of panicles per plant (QTL)-5-1",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0127400","LOC_Os01g03660",2.3219495,"Os03g0817100","LOC_Os03g60250",0,2.172726,{"$nulls":10},"Os11g0242800","Os04g0372700","Os01g0905800","Os01g0905800",3.5656865,-0.97642773,null,"Os01g0802700",4.8981066,"Os10g0562100",-1.7148021,{"$nulls":17},"Os01g0848200",0,2.543742,{"$nulls":9},"DRW1","OsWD40-166, WD40-166, OsDRW1","DWARF-RELATED WD40 PROTEIN 1 ","dwarf-related wd40 protein 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0045740 - positive regulation of DNA replication, GO:0006974 - response to DNA damage stimulus, GO:0070734 - histone H3-K27 methylation, GO:0010564 - regulation of cell cycle process, GO:0005634 - nucleus, GO:0045787 - positive regulation of cell cycle","TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000145 - internode length","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0006085 - root meristem , PO:0020148 - shoot apical meristem ","Os09g0241100","LOC_Os09g06560.1",null,null,"Os09g0422500","Os01g0703600",-0.99137324,0,null,"RLCK63","OsRLCK63","RECEPTOR-LIKE CYTOPLASMIC KINASE 63","Receptor-like Cytoplasmic Kinase 63",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0048316 - seed development, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0165100","LOC_Os02g06930.1, LOC_Os02g06930.2, LOC_Os02g06930.3, LOC_Os02g06930.4",{"$nulls":6},"SMG1","OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6","SMALL GRAIN 1","MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11",2," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0008283 - cell proliferation, GO:0050832 - defense response to fungus, GO:0009741 - response to brassinosteroid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009690 - cytokinin metabolic process, GO:0009611 - response to wounding, GO:0045595 - regulation of cell differentiation, GO:0009742 - brassinosteroid mediated signaling, GO:0009751 - response to salicylic acid stimulus, GO:0048364 - root development, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009409 - response to cold, GO:0009743 - response to carbohydrate stimulus, GO:0080027 - response to herbivore, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0010229 - inflorescence development, GO:0000165 - MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus","TO:0000454 - stem borer resistance, TO:0000396 - grain yield, TO:0002669 - diterpenoid phytoalexin content, TO:0000615 - abscisic acid sensitivity, TO:0000397 - grain size, TO:0000439 - fungal disease resistance, TO:0000447 - filled grain number, TO:0002677 - brassinosteroid sensitivity, TO:0002660 - cytokinin content, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000734 - grain length","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage ","Os02g0787300","LOC_Os02g54600.1",{"$nulls":6},"HD5","Hd5(t)*, Hd5, qHD5, HAP3H, OsHAP3H, NF-YB, CBF-A, DTH8, qHD5(t)*, Ghd8, Ghd8/DTH8, Lhd1, NF-YB11, OsNF-YB11, NFYB11, LH8, DTH8/Ghd8, RH8, DTH8/Ghd8/LHD1, CAR8, DTH8/Ghd8/ OsHAP3H, EF8, OsEF8","Heading date (QTL)-5(t)","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0043565 - sequence-specific DNA binding, GO:0009648 - photoperiodism, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0010119 - regulation of stomatal movement","TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0002616 - flowering time, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000439 - fungal disease resistance, TO:0000522 - stomatal conductance, TO:0000447 - filled grain number",null,"Os08g0174500","LOC_Os08g07740.1","Os01g0733200","Os01g0955100","Os05g0481000",1.526935,1.9932986,null,"qNFGP-3-2 (NFGP-3-2)","qNFGP-3-2 (NFGP-3-2)","number of filled grains per panicle (QTL)-3-2","number of filled grains per panicle (QTL)-3-2",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0704700","LOC_Os06g49120",2.3237917,"Os03g0823400","LOC_Os03g60840",0,1.0985451,{"$nulls":10},"Os07g0558400","Os04g0445600","Os03g0781400","Os03g0781400",3.426588,3.2535255,null,"Os04g0566300",4.8950834,"Os04g0105500",-1.7139115,{"$nulls":17},"Os11g0454000",0,2.6712487,{"$nulls":9},"WD40-190","OsWD40-190","WD40-REPEAT TRANSCRIPTION FACTOR 190","WD40-repeat transcription factor 190",11," Vegetative organ - Leaf,  Coloration - Anthocyanin","GO:0031540 - regulation of anthocyanin biosynthetic process","TO:0000326 - leaf color",null,"Os11g0610700","LOC_Os11g39650.1",null,null,"Os09g0441900","Os06g0301000",-1.0257816,0,null,"RLCK79","OsRLCK79","RECEPTOR-LIKE CYTOPLASMIC KINASE 79","Receptor-like Cytoplasmic Kinase 79",2," Reproductive organ - panicle,  Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0648100","LOC_Os02g43290.1",{"$nulls":6},"EMF2A","OsEMF2a, OsEMF2, EMF2","EMBRYONIC FLOWER 2A","EMBRYONIC FLOWER 2, Embryonic Flower2a",4," Reproductive organ - Heading date,  Seed - Morphological traits,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0008270 - zinc ion binding, GO:0009960 - endosperm development, GO:0006325 - chromatin organization, GO:0030154 - cell differentiation, GO:0007349 - cellularization, GO:0046872 - metal ion binding, GO:0006349 - genetic imprinting, GO:0031490 - chromatin DNA binding, GO:0010342 - cellularization of endosperm, GO:0009910 - negative regulation of flower development, GO:0010600 - regulation of auxin biosynthetic process, GO:0051726 - regulation of cell cycle, GO:0048316 - seed development, GO:0005634 - nucleus, GO:0007275 - multicellular organismal development, GO:0005622 - intracellular, GO:0009790 - embryonic development, GO:0010431 - seed maturation, GO:0010581 - regulation of starch biosynthetic process, GO:0009691 - cytokinin biosynthetic process","TO:0000300 - glucose content, TO:0000696 - starch content, TO:0000328 - sucrose content, TO:0006020 - shoot apical meristem development, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000137 - days to heading, TO:0000487 - endosperm color, TO:0000345 - seed viability, TO:0000620 - embryo development trait, TO:0002672 - auxin content, TO:0002653 - endosperm storage protein content, TO:0002661 - seed maturation, TO:0002660 - cytokinin content, TO:0006005 - fructose content","PO:0007633 - endosperm development stage , PO:0007631 - plant embryo stage , PO:0025281 - pollen , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009005 - root , PO:0009006 - shoot system , PO:0009089 - endosperm , PO:0001170 - seed development stage ","Os04g0162100","LOC_Os04g08034.1, LOC_Os04g08034.2, LOC_Os04g08034.3, LOC_Os04g08034.4, LOC_Os04g08034.6, LOC_Os04g08034.5",{"$nulls":6},"LRT1","Lrt1*, Lrt1, Lrt 1","DEFICIENCY OF LATERAL ROOTS","Deficiency of lateral roots, Lateral root-1, LATERAL ROOT LESS1",null," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0007275 - multicellular organismal development, GO:0051301 - cell division, GO:0009629 - response to gravity, GO:0010311 - lateral root formation, GO:0009958 - positive gravitropism, GO:0009501 - amyloplast","TO:0000227 - root length, TO:0002693 - gravity response trait, TO:0000257 - root branching","PO:0009005 - root ",null,null,"Os11g0528200","Os02g0706500","Os02g0137200",2.7745018,1.9851907,null,"qNFGP-4 (NFGP-4)","qNFGP-4 (NFGP-4)","number of filled grains per panicle (QTL)-4","number of filled grains per panicle (QTL)-4",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0341900","LOC_Os04g27410",2.324516,"Os03g0828100","LOC_Os03g61260",0,3.0872662,{"$nulls":10},"Os01g0600900","Os03g0189400","Os01g0938100","Os01g0938100",3.2042682,4.273134,null,"Os03g0123500",4.8892865,"Os04g0359700",-1.7128247,{"$nulls":17},"Os06g0326400",2.01738,2.1571176,{"$nulls":9},"BHLH2","OsbHLH002, bHLH002, OsbHLH2, bHLH2, OsICE1, ICE1, OsbHLH002/OsICE1","BASIC HELIX-LOOP-HELIX PROTEIN 2","basic helix-loop-helix protein 002, Inducer of CBF expression 1",11," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010440 - stomatal lineage progression, GO:0005634 - nucleus, GO:0010374 - stomatal complex development, GO:0050826 - response to freezing, GO:0009409 - response to cold, GO:0009631 - cold acclimation, GO:0003677 - DNA binding","TO:0000303 - cold tolerance, TO:0006003 - oligosaccharide content","PO:0009010 - seed ","Os11g0523700","LOC_Os11g32100.1",null,null,"Os05g0389000","Os12g0465700",-1.0289987,0,null,"RLCK80","OsRLCK80","RECEPTOR-LIKE CYTOPLASMIC KINASE 80","Receptor-like Cytoplasmic Kinase 80",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0650500","LOC_Os02g43430.1",{"$nulls":6},"EMF2B","OsEMF2b, EMF2b","EMBRYONIC FLOWER 2B","EMBRYONIC FLOWER 2b",9," Vegetative organ - Culm,  Seed - Morphological traits - Embryo,  Character as QTL - Germination","GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0010187 - negative regulation of seed germination, GO:0010336 - gibberellic acid homeostasis, GO:0009740 - gibberellic acid mediated signaling","TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000430 - germination rate","PO:0007633 - endosperm development stage , PO:0025281 - pollen , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009005 - root , PO:0009006 - shoot system , PO:0020056 - tegmen ","Os09g0306800","LOC_Os09g13630.1",{"$nulls":6},"PDC1","pdc1*, pdc1, pdc4, pdc 1, PDC 1, RRJ2, OsPDC1","PYRUVATE DECARBOXYLASE 1","pyruvate decarboxylase-1, Pyruvate decarboxylase isozyme 1, Pyruvate Decarboxylase 1",5," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0004737 - pyruvate decarboxylase activity, GO:0000287 - magnesium ion binding, GO:0009536 - plastid, GO:0010229 - inflorescence development, GO:0030976 - thiamin pyrophosphate binding, GO:0009413 - response to flooding","TO:0000621 - inflorescence development trait, TO:0000114 - flooding related trait","PO:0001083 - inflorescence development stage ","Os05g0469600","LOC_Os05g39310.1","Os07g0246200","Os02g0759400","Os10g0430600",2.0563192,1.968002,null,"qTNSP-1-2 (TNSP-1-2)","qTNSP-1-2 (TNSP-1-2)","total number of spikelets per panicle (QTL)-1-2","total number of spikelets per panicle (QTL)-1-2",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0269700","LOC_Os08g16830",2.3445482,"Os03g0861100","LOC_Os03g64320",0,1.8487477,{"$nulls":10},"Os07g0513000","Os01g0905800","Os06g0664200","Os06g0664200",3.1257572,3.7274342,null,"Os01g0801500",4.8881145,"Os08g0107800",-1.7094434,{"$nulls":17},"Os12g0106000",0,1.6871611,{"$nulls":9},"_","OsCOI1b, COI1b, OsCOI1H, COI1H, OsFbox260, Fbox260, Os_F0646","_","coronatine insensitive 1b, F-box protein 260",5," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010218 - response to far red light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009909 - regulation of flower development, GO:0010118 - stomatal movement, GO:0010150 - leaf senescence, GO:0009754 - detection of jasmonic acid stimulus, GO:0080027 - response to herbivore, GO:0009625 - response to insect, GO:0002213 - defense response to insect, GO:0009641 - shade avoidance, GO:0019005 - SCF ubiquitin ligase complex, GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0031348 - negative regulation of defense response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding","TO:0000396 - grain yield, TO:0000172 - jasmonic acid sensitivity, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000031 - silicon sensitivity, TO:0002712 - stay green trait, TO:0000424 - brown planthopper resistance, TO:0000261 - insect damage resistance, TO:0000298 - chlorophyll ratio, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility","PO:0001054 - 4 leaf senescence stage ","Os05g0449500","LOC_Os05g37690.1",null,null,"Os03g0315800","Os03g0437600",-1.0550466,0,null,"RLCK85","OsRLCK85, OsER2, ER2","RECEPTOR-LIKE CYTOPLASMIC KINASE 85","Receptor-like Cytoplasmic Kinase 85, ERECTA 2, OsERECTA2",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009554 - megasporogenesis, GO:0001558 - regulation of cell growth, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0022414 - reproductive process, GO:0004674 - protein serine/threonine kinase activity, GO:0042127 - regulation of cell proliferation, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0048229 - gametophyte development, GO:0009553 - embryo sac development","TO:0006032 - panicle size, TO:0000455 - seed set percent, TO:0000358 - female sterility, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000180 - spikelet fertility, TO:0000207 - plant height","PO:0028003 - gametophyte development stage , PO:0020003 - plant ovule , PO:0007041 - inflorescence emergence stage , PO:0000084 - plant sperm cell , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0009029 - stamen , PO:0009051 - spikelet , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009047 - stem ","Os02g0777400","LOC_Os02g53720.1, LOC_Os02g53720.2",{"$nulls":6},"CLF","OsSET24, SDG711, EZ1, OsCLF, OsSDG711","CURLY LEAF","SET protein 24, polycomb protein EZ1, SET DOMAIN GROUP 711",6," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010228 - vegetative to reproductive phase transition, GO:0005982 - starch metabolic process, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0031519 - PcG protein complex, GO:0016571 - histone methylation, GO:0009965 - leaf morphogenesis, GO:0009790 - embryonic development, GO:0051567 - histone H3-K9 methylation, GO:0045857 - negative regulation of molecular function, epigenetic, GO:0031047 - gene silencing by RNA, GO:0009294 - DNA mediated transformation, GO:0003700 - transcription factor activity, GO:0006306 - DNA methylation, GO:0010048 - vernalization response, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0048574 - long-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0003677 - DNA binding, GO:0003727 - single-stranded RNA binding, GO:0006349 - genetic imprinting","TO:0006032 - panicle size, TO:0002616 - flowering time, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000391 - seed size","PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem , PO:0009089 - endosperm , PO:0020056 - tegmen ","Os06g0275500","LOC_Os06g16390.1",{"$nulls":6},"PDC2","pdc2*, pdc2","PYRUVATE DECARBOXYLASE 2","pyruvate decarboxylase-2, Pyruvate decarboxylase isozyme 2",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0000287 - magnesium ion binding, GO:0046688 - response to copper ion, GO:0030976 - thiamin pyrophosphate binding, GO:0004737 - pyruvate decarboxylase activity","TO:0000021 - copper sensitivity",null,"Os03g0293500","LOC_Os03g18220.1, LOC_Os03g18220.2","Os07g0209000","Os07g0186000","Os01g0915200",0,1.9487625,null,"qTNSP-2-1 (TNSP-2-1)","qTNSP-2-1 (TNSP-2-1)","total number of spikelets per panicle (QTL)-2-1","total number of spikelets per panicle (QTL)-2-1",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0421800","LOC_Os03g30830",2.3464868,"Os04g0119000","LOC_Os04g02880",0,3.3447883,{"$nulls":10},"Os05g0405000","Os06g0522300","Os02g0578400","Os02g0578400",2.7575023,6.63686,null,"Os03g0165400",4.8809204,"Os02g0528900",-1.7046064,{"$nulls":17},"Os05g0139100",0,2.685197,{"$nulls":9},"ILI1","ILI1, OsbHLH154, OsILI1","INCREASED LEAF INCLINATION 1","Increased Leaf Inclination1, INCREASED LEAF INCLINATION 1, basic helix-loop-helix protein 154",4," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0005773 - vacuole, GO:0009640 - photomorphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0010086 - embryonic root morphogenesis, GO:0009826 - unidimensional cell growth","TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000397 - grain size, TO:0000206 - leaf angle",null,"Os04g0641700","LOC_Os04g54900.1",null,null,"Os06g0572400","Os07g0192300",-1.0620524,0,null,"RLCK86","OsRLCK86, PTK2, OsPTK2","RECEPTOR-LIKE CYTOPLASMIC KINASE 86","Receptor-like Cytoplasmic Kinase 86, Protein Tyrosine Kinase 2",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0006970 - response to osmotic stress, GO:0004674 - protein serine/threonine kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0030912 - response to deep water, GO:0009408 - response to heat, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding","TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000095 - osmotic response sensitivity, TO:0000653 - seed development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os02g0777800","LOC_Os02g53750.1, LOC_Os02g53750.2",{"$nulls":6},"IEZ1","OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718, DLN84, OsDLN84","ENHANCER OF ZESTE 1","indica Enhancer of Zeste 1, SET protein 15, DLN repressor 84, DLN motif protein 84",3," Reproductive organ - Heading date,  Seed,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009960 - endosperm development, GO:0031519 - PcG protein complex, GO:0003727 - single-stranded RNA binding, GO:0048575 - short-day photoperiodism, flowering, GO:0003677 - DNA binding, GO:0006349 - genetic imprinting, GO:0048587 - regulation of short-day photoperiodism, flowering, GO:0009790 - embryonic development","TO:0002616 - flowering time, TO:0000428 - callus induction","PO:0020056 - tegmen , PO:0009089 - endosperm ","Os03g0307800","LOC_Os03g19480.1",{"$nulls":6},"PI21","pi21, rMg40, OsHMP26, HMP26, OsHIPP5, HIPP5, OsaHIP05, HIP05","PYRICULARIA ORYZAE RESISTANCE 21","Pyricularia oryzae resistance-21 (field resistance), Pyricularia oryzae resistance-21, Magnaporthe grisea resistance-21 (field resistance), Magnaporthe grisea resistance-21, Heavy metal-associated protein 26, heavy-metal-associated isoprenylated plant protein 5",4," Tolerance and resistance - Disease resistance","GO:0046872 - metal ion binding, GO:0009620 - response to fungus, GO:0005634 - nucleus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000497 - fertility restoration trait",null,"Os04g0401000","LOC_Os04g32850.3, LOC_Os04g32850.1, LOC_Os04g32850.2","Os03g0606200","Os01g0547600","Os11g0131900",2.1340487,1.9461266,null,"qTGWT-1-2 (TGWT-1-2)","qTGWT-1-2 (TGWT-1-2)","1000-grain weight (QTL)-1-2","1000-grain weight (QTL)-1-2",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0579500","LOC_Os05g50330",2.3744586,"Os04g0223300","LOC_Os04g14680",0,4.304131,{"$nulls":10},"Os03g0129300","Os01g0542700","Os11g0242800","Os11g0242800",2.7024975,3.8949242,null,"Os03g0591300",4.875519,"Os01g0675800",-1.7036854,{"$nulls":17},"Os02g0833900",5.081926,3.2200165,{"$nulls":9},"ILI3","OsILI3, OsbHLH153, bHLH153, OsBUL2, BUL2","INCREASED LEAF INCLINATION 3","Increased Leaf Inclination3, basic helix-loop-helix protein 153, BRASSINOSTEROID UPREGULATED 1-LIKE2, BRASSINOSTEROID UPREGULATED 1-LIKE 2",3," Vegetative organ - Leaf","GO:0006355 - regulation of transcription, DNA-dependent, GO:0009733 - response to auxin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0046983 - protein dimerization activity, GO:0040008 - regulation of growth","TO:0000166 - gibberellic acid sensitivity, TO:0000206 - leaf angle, TO:0000163 - auxin sensitivity, TO:0002677 - brassinosteroid sensitivity",null,"Os03g0171700","LOC_Os03g07540.1",null,null,"Os03g0769100","Os04g0583500",-1.083526,0,null,"RLCK87","OsRLCK87, OsUSP15, USP15","RECEPTOR-LIKE CYTOPLASMIC KINASE 87","Receptor-like Cytoplasmic Kinase 87, universal stress protein 15",2," Reproductive organ - panicle","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0006950 - response to stress, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0007616 - flowering stage , PO:0007041 - inflorescence emergence stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os02g0787200","LOC_Os02g54590.1",{"$nulls":6},"FIE1","OsFIE1, OsWD40-154, OsEnS-116, OsFIE1/OsWD40-154, WD40-154","FERTILIZATION-INDEPENDENT ENDOSPERM 1","FERTILIZATION-INDEPENDENT ENDOSPERM1, Fertilization-Independent Endosperm 1, dwarf and flower aberrant mutant, endosperm-specific gene 116",8," Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016571 - histone methylation, GO:0043078 - polar nucleus, GO:0000003 - reproduction, GO:0010342 - cellularization of endosperm, GO:0006349 - genetic imprinting, GO:0048316 - seed development, GO:0009409 - response to cold, GO:0009790 - embryonic development","TO:0000455 - seed set percent, TO:0000653 - seed development trait, TO:0002653 - endosperm storage protein content, TO:0002673 - amino acid content, TO:0000391 - seed size","PO:0020056 - tegmen , PO:0001170 - seed development stage , PO:0009089 - endosperm ","Os08g0137250","LOC_Os08g04290.1",{"$nulls":6},"PI21","Pi21(t)*, Pi21, RMg41, Pi-21(t), Pi21(t)","PYRICULARIA ORYZAE RESISTANCE 21","Pyricularia oryzae resistance-21, Magnaporthe grisea resistance-21, Blast resistance 21",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000496 - carotenoid content, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os02g0190300","Os06g0667100","Os01g0846500",3.5549147,1.9442039,null,"qTGWT-2-1(t) (TGWT-2-1)","qTGWT-2-1(t) (TGWT-2-1)","1000-grain weight (QTL)-2-1(t)","1000-grain weight (QTL)-2-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0566701","LOC_Os01g38610",2.377971,"Os04g0234600","LOC_Os04g16680",0,3.3669853,{"$nulls":10},"Os03g0267300","Os03g0194900","Os03g0685000","Os03g0685000",2.4836004,1.8466314,null,"Os01g0875500",4.8743377,"Os03g0256800",-1.7005287,{"$nulls":17},"Os06g0681600",2.2868707,1.6549255,{"$nulls":9},"ILI5","ILI5, OsILI5, PGL2, OsPGL2, Os170, OsBUL1, BUL1, ILI5/PGL2, OsbHLH170, bHLH170","INCREASED LEAF INCLINATION 5","Increased Leaf Inclination 5, POSITIVE REGULATOR OF GRAIN LENGTH 2, BRASSINOSTEROID UPREGULATED 1-LIKE1, BRASSINOSTEROID UPREGULATED1 LIKE1, basic helix-loop-helix protein 170",2," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0051510 - regulation of unidimensional cell growth, GO:0009409 - response to cold","TO:0000734 - grain length, TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002688 - leaf lamina joint bending, TO:0000303 - cold tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0002687 - cell elongation trait, TO:0000590 - grain weight","PO:0009046 - flower , PO:0009051 - spikelet ","Os02g0747900","LOC_Os02g51320.1",null,null,"Os02g0810200","Os04g0520700",-1.087243,0,null,"RLCK90","OsRLCK90","RECEPTOR-LIKE CYTOPLASMIC KINASE 90","Receptor-like Cytoplasmic Kinase 90",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0821400","LOC_Os02g57560.1",{"$nulls":6},"FIE2","OsFIE2, FIE, OsWD40-153","FERTILIZATION-INDEPENDENT ENDOSPERM 2","FERTILIZATION-INDEPENDENT ENDOSPERM2, Fertilization-Independent Endosperm 2, Polycomb protein OsFIE2",8," Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity","GO:0043078 - polar nucleus, GO:0009409 - response to cold, GO:0016571 - histone methylation, GO:0006349 - genetic imprinting, GO:0000003 - reproduction",null,"PO:0020056 - tegmen ","Os08g0137100","LOC_Os08g04270.1, LOC_Os08g04270.2, LOC_Os08g04270.3",{"$nulls":6},"PI22","Pi22(t)*, Pi22, RMg42, pi22(t), Pi-22(t)","PYRICULARIA ORYZAE RESISTANCE 22","Pyricularia oryzae resistance-22, Magnaporthe grisea resistance-22, Blast resistance 22",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000498 - female fertility restoration trait","PO:0009025 - vascular leaf ",null,null,"Os05g0301500","Os03g0213100","Os11g0106700",0,1.9319158,null,"qTGWT-1-3 (TGWT-1-3)","qTGWT-1-3 (TGWT-1-3)","1000-grain weight (QTL)-1-3","1000-grain weight (QTL)-1-3",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os10g0150600","LOC_Os10g05980",2.3875122,"Os04g0430200","LOC_Os04g35100",0,2.148569,{"$nulls":10},"Os07g0489800","Os06g0318600","Os03g0129300","Os03g0129300",2.203059,3.3167012,null,"Os01g0249200",4.872751,"Os07g0604700",-1.6997224,{"$nulls":17},"Os05g0550300",4.8264666,6.0061736,{"$nulls":9},"ILI7","OsILI7, OsbHLH173, bHLH173","INCREASED LEAF INCLINATION 7","Increased Leaf Inclination7, basic helix-loop-helix protein 173",10," Vegetative organ - Leaf","GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0005773 - vacuole, GO:0009640 - photomorphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0009826 - unidimensional cell growth, GO:0010086 - embryonic root morphogenesis","TO:0000206 - leaf angle",null,"Os10g0404300","LOC_Os10g26460.1",null,null,"Os03g0123300","Os04g0574700",-1.0882174,0,null,"RLCK96","OsRLCK96","RECEPTOR-LIKE CYTOPLASMIC KINASE 96","Receptor-like Cytoplasmic Kinase 96",3," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os03g0130900","LOC_Os03g03880.1",{"$nulls":6},"WFP","OsSPL14, SPL14, IPA1, WFP/IPA1, OsSPL14/WFP/IPA1, OsIPA1, IPA1/OsSPL14","WEALTHY FARMER'S PANICLE","IDEAL PLANT ARCHITECTURE 1, Ideal Plant Architecture 1, Ideal Plant Architecture1, Squamosa promoter-binding-like protein 14, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14, Squamosa promoter binding protein like-14, IDEAL PLANT ARCHITECTURE1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0010050 - vegetative phase change, GO:0006350 - transcription, GO:0009607 - response to biotic stimulus, GO:0010187 - negative regulation of seed germination, GO:0005982 - starch metabolic process, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0048366 - leaf development, GO:0003677 - DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0045449 - regulation of transcription, GO:0009755 - hormone-mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process","TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000017 - anatomy and morphology related trait, TO:0000547 - primary branch number, TO:0000357 - growth and development trait, TO:0000011 - nitrogen sensitivity, TO:0002689 - leaf sheath length, TO:0000621 - inflorescence development trait, TO:0000340 - total soluble sugar content, TO:0000653 - seed development trait, TO:0000179 - biotic stress trait, TO:0000447 - filled grain number, TO:0000166 - gibberellic acid sensitivity, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000455 - seed set percent, TO:0000175 - bacterial blight disease resistance, TO:0000152 - panicle number, TO:0000135 - leaf length, TO:0002759 - grain number","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007057 - 0 seed germination stage ","Os08g0509600","LOC_Os08g39890.1",{"$nulls":6},"PI23","Pi23(t)*, Pi23(t), Pi23, RMg43, Pi-23(t)","PYRICULARIA ORYZAE RESISTANCE 23","Pyricularia oryzae resistance-23, Magnaporthe grisea resistance-23, Blast resistance 23",5," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000499 - flower anatomy and morphology trait","PO:0009025 - vascular leaf ",null,null,"Os09g0467200","Os01g0733200","Os05g0480000",0,1.9188571,null,"qSF-3-1(t) (QSf3)","qSF-3-1(t) (QSf3)","spikelet fertility (QTL)-3-1(t)","spikelet fertility (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0319700","LOC_Os05g25540",2.3925202,"Os04g0445700","LOC_Os04g36800",0,2.0806143,{"$nulls":10},"Os04g0234600","Os03g0690500","Os07g0562700","Os07g0562700",2.1846063,4.4393106,null,"Os06g0679500",4.860439,"osa-miR169m",-1.6987382,{"$nulls":17},"Os04g0469800",0,2.068486,{"$nulls":9},"IBH1","Os IBH1, OsIBH1, OsbHLH175, bHLH175","ILI1-BINDING BHLH PROTEIN 1","ILI1Binding bHLH Protein1, ILI1 Binding bHLH 1, basic helix-loop-helix protein 175",4," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009826 - unidimensional cell growth, GO:0006351 - transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0002687 - cell elongation trait, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os04g0660100","LOC_Os04g56500.1",null,null,"Os05g0227600","Os02g0579600",-1.0919329,0,null,"RLCK98","OsRLCK98, OsBSK1, BSK1, OsBSK1-1, BSK1-1","RECEPTOR-LIKE CYTOPLASMIC KINASE 98","Receptor-like Cytoplasmic Kinase 98, BR-signaling kinase 1, brassinosteroid-signaling kinase 1, brassinosteroid-SIGNALING KINASE 1-1",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0132800","LOC_Os03g04050.1",{"$nulls":6},"BLS1","OsBLS1, OsG1L6, G1L6, TH1, OsTH1, TH1/BSG1/BLS1/AFD1, BSG1, OsBSG1, AFD1, OsAFD1, BH1, OsBH1","BEAK LIKE SPIKELET 1","G1 LIKE PROTEIN 6, TRIANGULAR HULL1, TRIANGULAR HULL 1, BEAK LIKE SPIKELET1, abnormal ower and dwarf1, beak-shaped grain1, BEAK-SHAPED GRAIN 1, ABNORMAL FLOWER AND DWARF 1",2," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009416 - response to light stimulus, GO:0009299 - mRNA transcription, GO:0008361 - regulation of cell size, GO:0007275 - multicellular organismal development, GO:0001558 - regulation of cell growth, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0051302 - regulation of cell division, GO:0048437 - floral organ development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility, TO:0000564 - spikelet width, TO:0000590 - grain weight, TO:0000145 - internode length, TO:0002762 - width of grain with hull, TO:0006011 - lodicule shape, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000421 - pollen fertility, TO:0000397 - grain size, TO:0002730 - grain shape","PO:0009049 - inflorescence , PO:0009037 - lemma , PO:0009038 - palea , PO:0001083 - inflorescence development stage , PO:0025585 - floral organ formation stage , PO:0020032 - plumule , PO:0020104 - leaf sheath , PO:0001048 - palea development stage , PO:0001047 - lemma development stage ","Os02g0811000","LOC_Os02g56610.1",{"$nulls":6},"PI44","Pi44(t)*, Pi44(t), Pi44, Pi-44(t)","PYRICULARIA ORYZAE RESISTANCE 44","Pyricularia oryzae resistance-44, Magnaporthe grisea resistance-44, Blast resistance 44",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000501 - spikelet weight, TO:0000477 - panicle blast disease resistance","PO:0009025 - vascular leaf ",null,null,"Os02g0135300","Os09g0133600","Os07g0657900",0,1.8899571,null,"qSF-5-1(t) (QSf5)","qSF-5-1(t) (QSf5)","spikelet fertility (QTL)-5-1(t)","spikelet fertility (QTL)-5-1(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0238500","LOC_Os01g13690",2.4488654,"Os04g0509600","LOC_Os04g43070",0,-1.0550585,{"$nulls":10},"Os12g0480100","Os03g0599800","Os06g0133800","Os06g0133800",2.0900714,2.580087,null,"Os04g0350100",4.858172,"osa-miR439e",-1.6978077,{"$nulls":17},"Os03g0711100",0,2.263133,{"$nulls":9},"GELP62","OsGELP62, OsGELP62a, OsGELP62b, OsGELP62c, DARX1, OsDARX1","GDSL ESTERASE/LIPASE PROTEIN 62","GDSL esterase/lipase protein 62, DEACETYLASE ON ARABINOSYL SIDECHAIN OF XYLAN1",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0016787 - hydrolase activity, GO:0009834 - secondary cell wall biogenesis, GO:0005794 - Golgi apparatus","TO:0000207 - plant height, TO:0000051 - stem strength",null,"Os05g0159300","LOC_Os05g06720.3, LOC_Os05g06720.2, LOC_Os05g06720.1",null,null,"Os03g0131900","Os03g0666100",-1.1007951,0,null,"RLCK100","OsRLCK100","RECEPTOR-LIKE CYTOPLASMIC KINASE 100","Receptor-like Cytoplasmic Kinase 100",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0148700","LOC_Os03g05470.1",{"$nulls":6},"GW2","OsGW2","GRAIN WEIGHT 2","GRAIN WIDTH AND WEIGHT2, Grain width 2",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016874 - ligase activity, GO:0080050 - regulation of seed development, GO:0008270 - zinc ion binding, GO:0006109 - regulation of carbohydrate metabolic process","TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000402 - grain width, TO:0000397 - grain size","PO:0009005 - root , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0009066 - anther , PO:0005360 - aleurone layer ","Os02g0244100","LOC_Os02g14720.1, LOC_Os02g14720.2",{"$nulls":6},"TPS3","OsTPS3","TERPENE SYNTHASE 3",null,null," Biochemical character,  Tolerance and resistance - Insect resistance","GO:0010333 - terpene synthase activity, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000401 - plant growth hormone sensitivity",{"$nulls":3},"Os02g0115900","Os11g0528200","Os05g0137200",0,1.8693342,null,"qSF-6-1(t) (QSf6)","qSF-6-1(t) (QSf6)","spikelet fertility (QTL)-6(t)","spikelet fertility (QTL)-6(t)",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0686600","LOC_Os07g48710",2.4509923,"Os04g0538000","LOC_Os04g45480",0,-1.9123079,{"$nulls":10},"Os04g0106400","Os06g0502900","Os08g0347500","Os08g0347500",1.9158579,1.7727855,null,"Os03g0234100",4.857046,"Os05g0495700",-1.696875,{"$nulls":17},"Os02g0731700",0,1.7829956,{"$nulls":9},"SIP2","Sip2, OsARD1, ARD1, OsIDI1, IDI1, OsIDI1L/OsARD1","SUBMERGENCE-INDUCED PROTEIN 2","submergence-induced protein 2, submergence-induced protein2, acireductone dioxygenase 1",10," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0034059 - response to anoxia, GO:0009409 - response to cold, GO:0010309 - acireductone dioxygenase [iron(II)-requiring] activity, GO:0019509 - methionine salvage, GO:0046872 - metal ion binding, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0009753 - response to jasmonic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0010150 - leaf senescence, GO:0009611 - response to wounding","TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000131 - leaf water potential, TO:0000566 - stomatal frequency, TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0000136 - relative water content, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000173 - ethylene sensitivity, TO:0000095 - osmotic response sensitivity","PO:0001054 - 4 leaf senescence stage ","Os10g0419400","LOC_Os10g28350.1",null,null,"Os03g0685000","Os01g0834400",-1.1052814,0,null,"RLCK102","OsRLCK102","RECEPTOR-LIKE CYTOPLASMIC KINASE 102","Receptor-like Cytoplasmic Kinase 102",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0170400","LOC_Os03g07430.1, LOC_Os03g07430.2, LOC_Os03g07430.3, LOC_Os03g07430.4, LOC_Os03g07430.5",{"$nulls":6},"GBSSII","GBSS2, OsGBSSII, OsGBSS2","GRANULE BOUND STARCH SYNTHASE II","Granule-bound starch synthase Ib, Granule-bound starch synthase II",7," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005982 - starch metabolic process, GO:0009408 - response to heat, GO:0009011 - starch synthase activity, GO:0004373 - glycogen (starch) synthase activity, GO:0019252 - starch biosynthetic process, GO:0010229 - inflorescence development","TO:0000259 - heat tolerance, TO:0000621 - inflorescence development trait","PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0001083 - inflorescence development stage ","Os07g0412100","LOC_Os07g22930.4, LOC_Os07g22930.3, LOC_Os07g22930.2",{"$nulls":6},"PI39","Pi39(t), Pi39","PYRICULARIA ORYZAE RESISTANCE 39","Pyricularia grisea resistance 39, Magnaporthe grisea resistance 39, Blast resistance 39",12," Tolerance and resistance - Disease resistance,  Character as QTL - Grain quality","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000510 - penetrated to total root ratio",{"$nulls":3},"Os06g0143900","Os07g0246200","Os08g0532200",1.8331337,1.8685623,null,"qSF-7-1(t) (QSf7)","qSF-7-1(t) (QSf7)","spikelet fertility (QTL)-7-1(t)","spikelet fertility (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0113500","LOC_Os12g02200",2.4671364,"Os04g0583200","LOC_Os04g49370",0,1.7046095,{"$nulls":10},"Os06g0664200","Os08g0176900","Os01g0723400","Os01g0723400",1.6914802,1.4522462,null,"Os08g0460000",4.8411865,"Os03g0183200",-1.6938057,{"$nulls":17},"Os04g0640700",0,4.935722,{"$nulls":9},"_","OsRab7B3, Rab7B3, OsRab7, Rab7","_","small GTP-binding protein OsRab7B3, GTP-binding protein OsRab7",5," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0016192 - vesicle-mediated transport, GO:0005525 - GTP binding, GO:0005634 - nucleus, GO:0005886 - plasma membrane, GO:0005774 - vacuolar membrane, GO:0015031 - protein transport, GO:0009414 - response to water deprivation, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0007264 - small GTPase mediated signal transduction, GO:0009408 - response to heat, GO:0030104 - water homeostasis, GO:0007033 - vacuole organization","TO:0006002 - proline content, TO:0000333 - sugar content, TO:0000396 - grain yield, TO:0000276 - drought tolerance, TO:0000325 - soluble protein content, TO:0000495 - chlorophyll content, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000467 - cell membrane stability, TO:0000605 - hydrogen peroxide content",null,"Os05g0516600","LOC_Os05g44050.1",null,null,"Os03g0563300","Os12g0479400",-1.1378107,0,null,"RLCK108","OsRLCK108","RECEPTOR-LIKE CYTOPLASMIC KINASE 108","Receptor-like Cytoplasmic Kinase 108",3," Reproductive organ - panicle,  Seed","GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0283900","LOC_Os03g17550.1",{"$nulls":6},"RSR1","AP2/EREBP#090, AP2/EREBP90, OsTOE1, TOE1, qHD5, AP2-1, AP2/EREBP/RSR1, OsRSR1, DLN130, DLN130a, DLN130b, OsDLN130, OsDLN130a, OsDLN130b","RICE STRACH REGULATOR 1","AP2/EREBP family transcription factor, APETALA2/ethylene-responsive element binding protein 90, Rice Starch Regulator1, APETALA2-1, DLN repressor 130, DLN motif protein 130",5," Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process, GO:0010228 - vegetative to reproductive phase transition, GO:0010077 - maintenance of inflorescence meristem identity, GO:0009887 - organ morphogenesis, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0048573 - photoperiodism, flowering, GO:0048437 - floral organ development","TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0006032 - panicle size, TO:0006030 - spikelet meristem identity",null,"Os05g0121600","LOC_Os05g03040.3, LOC_Os05g03040.2, LOC_Os05g03040.1",{"$nulls":6},"ROMT9","COMT, OsCOMT, ROMT-9, OsCOMT1, OsCAldOMT1, CAldOMT1, OsOMT","O-METHYLTRANSFERASE 9","Quercetin 3-O-methyltransferase 1, Flavonol 3-O-methyltransferase 1, caffeic acid 3-O-methyltransferase, Flavonol 3-O-methyltransferase 1, caffeic acid O-methyltransferase 1, 5-hydroxyconiferaldehyde O-methyltransferase 1, 5-hydroxyconiferaldehyde OMT1, 5-HCAld OMT1",8," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0009698 - phenylpropanoid metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0008171 - O-methyltransferase activity, GO:0009642 - response to light intensity, GO:0009807 - lignan biosynthetic process, GO:0009809 - lignin biosynthetic process, GO:0046983 - protein dimerization activity, GO:0005737 - cytoplasm, GO:0017096 - acetylserotonin O-methyltransferase activity, GO:0030187 - melatonin biosynthetic process, GO:0030755 - quercetin 3-O-methyltransferase activity","TO:0000460 - light intensity sensitivity, TO:0000731 - lignin content, TO:0000051 - stem strength, TO:0000160 - UV light sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000733 - lignin biosynthesis trait",null,"Os08g0157500","LOC_Os08g06100.1","Os09g0542000","Os07g0209000","Os03g0856700",1.9106296,1.865975,null,"qSF-8-1(t) (QSf8)","qSF-8-1(t) (QSf8)","spikelet fertility (QTL)-8-1(t)","spikelet fertility (QTL)-8-1(t)",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0725300","LOC_Os06g50960",2.522997,"Os04g0600300","LOC_Os04g51160",0,-1.8078017,{"$nulls":10},"Os04g0457000","Os10g0515200","Os02g0601300","Os02g0601300",1.6465193,-0.9919462,null,"Os11g0654100",4.840424,"Os08g0550000",-1.6872311,{"$nulls":17},"Os01g0206700",0,1.3550063,{"$nulls":9},"NAL11","OsDjC58, DjC58","NARROW LEAF 11","DnaJ domain protein C58, narrow leaf 11",7," Vegetative organ - Leaf",null,"TO:0000370 - leaf width",null,"Os07g0192300","LOC_Os07g09450.1",null,null,"Os03g0712800","Os08g0323700",-1.1379477,0,null,"BBS1","OsRLCK109, RLCK109, OsBBS1, OSBBS1/OsRLCK109, PTK4, PTK4/BBS1, OsPTK4","BILATERAL BLADE SENESCENCE 1","Receptor-like Cytoplasmic Kinase 109, bilateral blade senescence 1, Protein Tyrosine Kinase 4",3," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0006970 - response to osmotic stress, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0045492 - xylan biosynthetic process, GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0009658 - chloroplast organization, GO:0009414 - response to water deprivation, GO:0010413 - glucuronoxylan metabolic process, GO:0010150 - leaf senescence","TO:0000397 - grain size, TO:0000227 - root length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000095 - osmotic response sensitivity, TO:0000524 - submergence tolerance, TO:0000259 - heat tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000249 - leaf senescence, TO:0001007 - coleoptile length, TO:0000298 - chlorophyll ratio, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility","PO:0007632 - seed maturation stage , PO:0007010 - whole plant fruit ripening stage , PO:0020103 - flag leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0001083 - inflorescence development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0001170 - seed development stage ","Os03g0364400","LOC_Os03g24930.1, LOC_Os03g24930.2",{"$nulls":6},"PPS","OsWD40-55, OsCOP1, COP1, YEL, OsYEL, OsPPS, COP1-1, OsCOP1-1","PETER PAN SYNDROME","COP1 ortholog, CONSTITUTIVE PHOTOMORPHOGENIC 1, yellowish-pericarp embryo lethal",2," Reproductive organ - Heading date,  Heterochrony,  Coloration - Others,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0048573 - photoperiodism, flowering, GO:0008270 - zinc ion binding, GO:0006281 - DNA repair, GO:0009416 - response to light stimulus, GO:0005634 - nucleus, GO:0009640 - photomorphogenesis, GO:0046283 - anthocyanin metabolic process, GO:0010228 - vegetative to reproductive phase transition, GO:0016874 - ligase activity, GO:0010119 - regulation of stomatal movement, GO:0009793 - embryonic development ending in seed dormancy, GO:0009962 - regulation of flavonoid biosynthetic process, GO:0009641 - shade avoidance, GO:0009266 - response to temperature stimulus, GO:0009628 - response to abiotic stimulus, GO:0046685 - response to arsenic","TO:0000326 - leaf color, TO:0000675 - ferulic acid content, TO:0006006 - monosaccharide content, TO:0000430 - germination rate, TO:0002616 - flowering time, TO:0000229 - photoperiod sensitivity, TO:0000432 - temperature response trait, TO:0000075 - light sensitivity, TO:0000051 - stem strength, TO:0006007 - polysaccharide content, TO:0000137 - days to heading, TO:0000168 - abiotic stress trait, TO:0000396 - grain yield, TO:0000707 - pericarp color, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000290 - flavonoid content, TO:0000064 - embryo related trait",null,"Os02g0771100","LOC_Os02g53140.1",{"$nulls":6},"BIF2","bif2, Osbif2, OsBIF2, OsPID, PID","BARREN INFLORESCENCE 2","barren inflorescence2, barren inflorescence2-like serine/threonine protein kinase, rice ortholog of PINOID, OsPINOID, PINOID",12," Reproductive organ - Inflorescence,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048367 - shoot development, GO:0048766 - root hair initiation, GO:0009908 - flower development, GO:0009734 - auxin mediated signaling pathway, GO:0004674 - protein serine/threonine kinase activity, GO:0035266 - meristem growth, GO:0005886 - plasma membrane, GO:0009926 - auxin polar transport, GO:0009986 - cell surface, GO:0048481 - ovule development, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009958 - positive gravitropism, GO:0009555 - pollen development, GO:0010622 - specification of ovule identity, GO:0048479 - style development, GO:0010076 - maintenance of floral meristem identity, GO:0048480 - stigma development, GO:0005524 - ATP binding, GO:0048767 - root hair elongation, GO:0048825 - cotyledon development, GO:0048364 - root development, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0006010 - lodicule number, TO:0000225 - stamen number, TO:0000485 - sterility related trait, TO:0000214 - anther shape","PO:0007619 - ovule development stage ","Os12g0614600","LOC_Os12g42020.1","Os01g0864500","Os03g0606200","Os02g0465900",0,1.8619734,null,"qSF-10-2(t) (QSf10)","qSF-10-2(t) (QSf10)","spikelet fertility (QTL)-10-2(t)","spikelet fertility (QTL)-10-2(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0560000","LOC_Os09g38710",2.5940719,"Os04g0604900","LOC_Os04g51520",0,1.0033355,{"$nulls":10},"Os07g0105600","Os02g0654400","Os08g0126300","Os08g0126300",-1.3604058,-1.3236626,null,"Os02g0646500",4.8398767,"Os04g0598600",-1.6867648,{"$nulls":17},"Os08g0414700",1.69453,2.293911,{"$nulls":9},"_","FCP1, FCP1/Os CLE402, Os CLE402, OsCLE402","_","FON2-LIKE CLE PROTEIN1, CLV3/ESR-related 402, CLAVATA3/ENDOSPERM SURROUNDING REGION (ESR)-related (CLE) protein 402",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf","GO:0048366 - leaf development","TO:0000655 - leaf development trait",null,"Os04g0473800","LOC_Os04g39770.1",null,null,"Os05g0349700","Os01g0765000",-1.1396238,0,null,"RLCK110","OsRLCK110, PTK5, OsPTK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 110","Receptor-like Cytoplasmic Kinase 110, Protein Tyrosine Kinase 5",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0407900","LOC_Os03g29410.1",{"$nulls":6},"EP3","EP3/LP, LP, OsLP, OsFbox076, OsFbox76, Os_F0106, OsEP3","ERECT PANICLE 3","LARGER PANICLE, F-box protein 76",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0048513 - organ development, GO:0048437 - floral organ development, GO:0048316 - seed development, GO:0005737 - cytoplasm, GO:0009908 - flower development, GO:0010118 - stomatal movement, GO:0009760 - C4 photosynthesis, GO:0010052 - guard cell differentiation, GO:0005634 - nucleus","TO:0000391 - seed size, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0006029 - glume number, TO:0000225 - stamen number, TO:0002768 - spikelet length, TO:0000564 - spikelet width, TO:0000371 - yield trait, TO:0000269 - 100-seed weight, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000625 - spikelet density, TO:0000531 - anther length, TO:0006013 - carpel number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0006022 - floral organ development trait, TO:0000370 - leaf width, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0002600 - flower organ size, TO:0000397 - grain size, TO:0000357 - growth and development trait, TO:0006038 - floral organ number, TO:0000622 - flower development trait, TO:0000421 - pollen fertility","PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0006036 - root epidermis , PO:0020123 - root cap , PO:0009013 - portion of meristem tissue , PO:0020127 - primary root , PO:0009046 - flower , PO:0009010 - seed , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0025585 - floral organ formation stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage ","Os02g0260200","LOC_Os02g15950.1",{"$nulls":6},"CAB1R","cab1R, LHCP, CAB, OsLhcb1, Lhcb1, Cab1, OsCAB1, Lhcb1b, OsLhcb1b, CAB2R","CHLOROPHYLL A/B BINDING PROTEIN 1R","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"",9," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010114 - response to red light, GO:0009637 - response to blue light, GO:0000287 - magnesium ion binding, GO:0009522 - photosystem I, GO:0009507 - chloroplast, GO:0007623 - circadian rhythm, GO:0016021 - integral to membrane, GO:0018298 - protein-chromophore linkage, GO:0009536 - plastid, GO:0009535 - chloroplast thylakoid membrane, GO:0016168 - chlorophyll binding, GO:0009658 - chloroplast organization, GO:0015979 - photosynthesis, GO:0009765 - photosynthesis, light harvesting, GO:0009523 - photosystem II","TO:0002715 - chloroplast development trait, TO:0000159 - blue light sensitivity, TO:0000158 - red light sensitivity",null,"Os09g0346500","LOC_Os09g17740.1","Os02g0532500","Os02g0190300","Os07g0568700",0,1.8588246,null,"qSF-11-1(t) (QSf11)","qSF-11-1(t) (QSf11)","spikelet fertility (QTL)-11-1(t)","spikelet fertility (QTL)-11-1(t)",11," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0810900","LOC_Os02g56600",2.6135428,"Os04g0606000","LOC_Os04g51660",0,-1.0785271,{"$nulls":10},"Os06g0132400","Os02g0185300","Os02g0244700","Os02g0244700",-1.6086735,-1.3553886,null,"Os01g0514600",4.8379703,"Os10g0190900",-1.6866058,{"$nulls":17},"Os09g0422500",3.34322,1.567009,{"$nulls":9},"FC24","OsUGE2, UGE2, OsFC24, BZ1, OsBZ1","FRAGILE CULM 24","UDP-glucose epimerase 2, fragile culm 24, brittle stem and zebra leaf 1",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0006012 - galactose metabolic process, GO:0005795 - Golgi stack, GO:0003978 - UDP-glucose 4-epimerase activity, GO:0009664 - plant-type cell wall organization, GO:0010215 - cellulose microfibril organization, GO:0009658 - chloroplast organization, GO:0005829 - cytosol, GO:0010405 - arabinogalactan protein metabolic process, GO:0050662 - coenzyme binding, GO:0042546 - cell wall biogenesis, GO:0010053 - root epidermal cell differentiation, GO:0009969 - xyloglucan biosynthetic process, GO:0006950 - response to stress","TO:0000590 - grain weight, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000346 - tiller number, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000731 - lignin content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000051 - stem strength","PO:0009047 - stem , PO:0025034 - leaf ","Os08g0374800","LOC_Os08g28730.1",null,null,"Os11g0544800","Os02g0121300",-1.1479763,0,null,"RLCK120","OsRLCK120","RECEPTOR-LIKE CYTOPLASMIC KINASE 120","Receptor-like Cytoplasmic Kinase 120",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009627 - systemic acquired resistance, GO:0009697 - salicylic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0004683 - calmodulin-dependent protein kinase activity, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0825800","LOC_Os03g61060.1, LOC_Os03g61060.2",{"$nulls":6},"ETR2","etr2, OsPK1, PK1, ERL1, OsETR2, OsERL1, OS-ETR2, OsERS3","ETHYLENE RESPONSE 2","subfamily I ethylene receptor, ethylene receptor 2",4," Biochemical character,  Seed - Physiological traits - Storage substances","GO:0005524 - ATP binding, GO:0005789 - endoplasmic reticulum membrane, GO:0000156 - two-component response regulator activity, GO:0009739 - response to gibberellin stimulus, GO:0009413 - response to flooding, GO:0009873 - ethylene mediated signaling pathway, GO:0018106 - peptidyl-histidine phosphorylation, GO:0009733 - response to auxin stimulus, GO:0000155 - two-component sensor activity, GO:0009723 - response to ethylene stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048573 - photoperiodism, flowering","TO:0000163 - auxin sensitivity, TO:0000286 - submergence sensitivity, TO:0000696 - starch content, TO:0000382 - 1000-seed weight, TO:0000173 - ethylene sensitivity, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000166 - gibberellic acid sensitivity",null,"Os04g0169100","LOC_Os04g08740.3, LOC_Os04g08740.2, LOC_Os04g08740.1",{"$nulls":6},"CDSP32","CDSP32","CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN","chloroplastic drought-induced stress protein of 32 kD",null," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0002657 - oxidative stress",{"$nulls":3},"Os03g0808600","Os05g0301500","Os09g0409000",0,1.8579812,null,"qGPP-1-1(t) (gpp1,1)","qGPP-1-1(t) (gpp1,1)","grains per panicle (QTL)-1-1(t)","grains per panicle (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0782200","LOC_Os03g56930",2.6140633,"Os04g0659100","LOC_Os04g56400",0,4.2717166,{"$nulls":10},"Os03g0279950","Os02g0683500","Os07g0630800","Os07g0630800",-2.1778238,1.5200287,null,"Os05g0550300",4.8264666,"Os11g0278300",-1.6839733,{"$nulls":17},"Os10g0371100",0,1.6778313,{"$nulls":9},"YGL6 ","CSP41b, LGL1","YELLOW-GREEN LEAF 6","NAD-dependent epimerase/dehydratase, chloroplast stem-loop-binding protein of 41 kDa b, light-green leaves 1, yellow-green leaf 6",12," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others","GO:0010287 - plastoglobule, GO:0016020 - membrane, GO:0006364 - rRNA processing, GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0009658 - chloroplast organization, GO:0007623 - circadian rhythm, GO:0010319 - stromule, GO:0005840 - ribosome, GO:0005777 - peroxisome, GO:0010027 - thylakoid membrane organization, GO:0009941 - chloroplast envelope, GO:0048046 - apoplast, GO:0042742 - defense response to bacterium, GO:0005773 - vacuole","TO:0000293 - chlorophyll-a content, TO:0002655 - starch grain size, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000298 - chlorophyll ratio, TO:0000326 - leaf color, TO:0000295 - chlorophyll-b content",null,"Os12g0420200 ","LOC_Os12g23180.1",null,null,"Os03g0169800","Os10g0498700",-1.1622273,0,null,"RLCK122","OsRLCK122, OsUSP20, USP20","RECEPTOR-LIKE CYTOPLASMIC KINASE 122","Receptor-like Cytoplasmic Kinase 122, universal stress protein 20",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0006950 - response to stress, GO:0009413 - response to flooding, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000524 - submergence tolerance, TO:0000653 - seed development trait","PO:0005052 - plant callus , PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0839900","LOC_Os03g62340.1",{"$nulls":6},"RAC1","OsRAC1, OsRac1, Os Rac1, Rac1, Os-Rac1","RAC/ROP-TYPE GTPASE 1","small GTP-binding protein 1, Rac-like GTP-binding protein 1, GTPase Rac homolog, Rice homolog of mammalian Rac-GTPase RAC1",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0005525 - GTP binding, GO:0005737 - cytoplasm, GO:0006915 - apoptosis, GO:0019898 - extrinsic to membrane, GO:0005886 - plasma membrane, GO:0002238 - response to molecule of fungal origin, GO:0007264 - small GTPase mediated signal transduction, GO:0050832 - defense response to fungus, GO:0052567 - response to defense-related host reactive oxygen species production, GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0051302 - regulation of cell division","TO:0000112 - disease resistance, TO:0000439 - fungal disease resistance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000590 - grain weight","PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009066 - anther ","Os01g0229400","LOC_Os01g12900.3, LOC_Os01g12900.2, LOC_Os01g12900.1",{"$nulls":6},"GH3-8","OsGH3-8, OsMGH3, OsGH3.8, GH3.8, OsGH3-2","GH3-8",null,7," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0016874 - ligase activity, GO:0009908 - flower development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009852 - auxin catabolic process, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0006955 - immune response, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000020 - black streak dwarf virus resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0002672 - auxin content, TO:0000622 - flower development trait, TO:0000172 - jasmonic acid sensitivity","PO:0009066 - anther , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0007615 - flower development stage ","Os07g0592600","LOC_Os07g40290.1","Os06g0133000","Os09g0467200","Os02g0733300",3.2091076,1.841709,null,"qGPP-1-2(t) (gpp1.2)","qGPP-1-2(t) (gpp1.2)","grains per panicle (QTL)-1-2(t)","grains per panicle (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0548300","LOC_Os12g36194",2.6423004,"Os05g0103200","LOC_Os05g01270",0,2.154865,{"$nulls":10},"Os05g0438600","Os04g0508500","Os08g0366000","Os08g0366000",-2.8793118,-1.3273716,null,"Os08g0200100",4.824087,"Os01g0667100",-1.6821321,{"$nulls":17},"Os05g0137200",0,1.8693342,{"$nulls":9},"PAL","OsPAL, OsPAL08, PAL2, GP-28, GP28, PAL08, OsPAL2, OsPAL8, PAL8","PHENYLALANINE AMMONIA-LYASE","phenylalanine ammonia-lyase, phenylalanine ammonia-lyase 2",2," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide, GO:0009751 - response to salicylic acid stimulus, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0009718 - anthocyanin biosynthetic process, GO:0002215 - defense response to nematode, GO:0005737 - cytoplasm, GO:0006559 - L-phenylalanine catabolic process, GO:0009800 - cinnamic acid biosynthetic process, GO:0009411 - response to UV, GO:0009807 - lignan biosynthetic process, GO:0002213 - defense response to insect","TO:0000160 - UV light sensitivity, TO:0000731 - lignin content, TO:0000074 - blast disease, TO:0000384 - nematode damage resistance, TO:0000733 - lignin biosynthesis trait, TO:0000424 - brown planthopper resistance, TO:0000326 - leaf color, TO:0000058 - herbicide sensitivity",null,"Os02g0626400","LOC_Os02g41650.2, LOC_Os02g41650.1, LOC_Os02g41650.3",null,null,"Os02g0198300","Os12g0502300",-1.1735872999999999,0,null,"RLCK151","OsRLCK151","RECEPTOR-LIKE CYTOPLASMIC KINASE 151","Receptor-like Cytoplasmic Kinase 151",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0430000","LOC_Os04g35080.1",{"$nulls":6},"MPK6","OsMPK6, OsDR6, DR6, OsMPK4, MPK4, OsMAPK4, MAPK4","MITOGEN-ACTIVATED PROTEIN KINASE 6","mitogen-activated protein kinase 6, MAP kinase 4",10," Biochemical character,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0042539 - hypotonic salinity response, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009861 - jasmonic acid and ethylene-dependent systemic resistance, GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0000165 - MAPKKK cascade, GO:0009620 - response to fungus, GO:0080026 - response to indolebutyric acid stimulus, GO:0009411 - response to UV, GO:0009863 - salicylic acid mediated signaling pathway, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0006972 - hyperosmotic response, GO:0009734 - auxin mediated signaling pathway, GO:0043622 - cortical microtubule organization, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009751 - response to salicylic acid stimulus, GO:0009611 - response to wounding, GO:0002213 - defense response to insect","TO:0000276 - drought tolerance, TO:0002668 - jasmonic acid content, TO:0000454 - stem borer resistance, TO:0000160 - UV light sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0000175 - bacterial blight disease resistance","PO:0001170 - seed development stage ","Os10g0533600","LOC_Os10g38950.1",{"$nulls":6},"GID1","gid1, OsGID1, Thl, Os GID1","GIBBERELLIN INSENSITIVE DWARF1","GIBBERELLIN-INSENSITIVE DWARF1, Gibberellin receptor GID1, Gibberellin-insensitive dwarf protein 1, Protein GIBBERELLIN INSENSITIVE DWARF1, Thumbelina, GA-insensitive dwarf 1",5," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0014001 - sclerenchyma cell differentiation, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling, GO:2000038 - regulation of stomatal complex development, GO:0009739 - response to gibberellin stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0008152 - metabolic process, GO:0016787 - hydrolase activity, GO:0004872 - receptor activity, GO:0010271 - regulation of chlorophyll catabolic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0006109 - regulation of carbohydrate metabolic process, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:2000037 - regulation of stomatal complex patterning","TO:0000566 - stomatal frequency, TO:0000291 - carbohydrate content, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000286 - submergence sensitivity, TO:0000276 - drought tolerance, TO:0000135 - leaf length, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000470 - vascular tissue related trait",null,"Os05g0407500","LOC_Os05g33730.1","Os06g0716700","Os02g0135300","Os08g0546100",3.2197192,1.8338398,null,"qGPP-2-1(t) (gpp2.1)","qGPP-2-1(t) (gpp2.1)","grains per panicle (QTL)-2-1(t)","grains per panicle (QTL)-2-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0264200","LOC_Os06g15330",2.6492913,"Os05g0137200","LOC_Os05g04610",0,1.8693342,{"$nulls":10},"Os06g0608700","Os07g0258400","Os01g0866400","Os01g0866400",-3.1494305,2.356459,null,"Os07g0150901",4.8202686,"Os03g0687700",-1.6818318,{"$nulls":17},"Os02g0510200",0,1.0548363,{"$nulls":9},"MIR319B","OsmiR319b, Osa-miR319b","MICRORNA319B","rice microRNA319b, MicroRNA319b",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Other","GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0009409 - response to cold, GO:0009965 - leaf morphogenesis, GO:0006379 - mRNA cleavage","TO:0000370 - leaf width, TO:0000303 - cold tolerance",{"$nulls":5},"Os12g0263000","Os07g0222300",-1.176473,0,null,"RLCK152","OsRLCK152","RECEPTOR-LIKE CYTOPLASMIC KINASE 152","Receptor-like Cytoplasmic Kinase 152",4," Reproductive organ - panicle,  Seed","GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0004672 - protein kinase activity","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0490500","LOC_Os04g41310.1, LOC_Os04g41310.2",{"$nulls":6},"AMY3E","Amy3D/E*(RAmy3D/E), alpha Amy8, alphaAmy8, AmyII-3, AMY1.4, Amy3E, Amy3D/E*, RAmy3D/E, Amy9, RAmy3E, alphaAmy8-C, AMY3E/AMY1.4, OsAmy3E","ALPHA-AMYLASE 3E","Alpha-amylase3E, Alpha-amylase isozyme 3E precursor, Alpha-amylase isozyme 3E, Alpha-amylase-3E, Amylase-9, Alpha-amylase-3D",8," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0080006 - internode patterning, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0001666 - response to hypoxia, GO:0009739 - response to gibberellin stimulus, GO:0051775 - response to redox state","TO:0000544 - mesocotyl length, TO:0000259 - heat tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000015 - oxygen sensitivity","PO:0007057 - 0 seed germination stage ","Os08g0473600","LOC_Os08g36900.1, LOC_Os08g36900.2",{"$nulls":6},"HSA32","Hsa32, OsPPS1","HEAT-STRESS-ASSOCIATED 32KD PROTEIN","heat-stress-associated 32-kD protein, rice ortholog of Hsa32, Hsa32 homolog, phosphosulfolactate synthase 1",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010608 - posttranscriptional regulation of gene expression, GO:0005618 - cell wall, GO:0019295 - coenzyme M biosynthetic process, GO:0006950 - response to stress, GO:0010286 - heat acclimation, GO:0004252 - serine-type endopeptidase activity",null,null,"Os06g0682900 ","LOC_Os06g46900.1, LOC_Os06g46900.2, LOC_Os06g46900.3, LOC_Os06g46900.4","Os06g0716701","Os02g0115900","Os01g0631700",0,1.8202939,null,"qGPP-3-1(t) (gpp3.1)","qGPP-3-1(t) (gpp3.1)","grains per panicle (QTL)-3-1(t)","grains per panicle (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0243700","LOC_Os03g14010",2.6563866,"Os05g0163300","LOC_Os05g07060",0,3.399143,{"$nulls":10},"Os01g0966200","Os03g0785900","Os08g0224300","Os08g0224300",3.2541883,2.7845814,null,"Os10g0478100",4.802132,"Os05g0490000",-1.674954,{"$nulls":17},"Os05g0515600",8.009467,5.9088807,{"$nulls":9},"MIR164C","miR164c, osa-miR164c","MICRORNA164C","MICRORNA164c, osa-miRNA164c",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0048366 - leaf development, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0010199 - organ boundary specification between lateral organs and the meristem","TO:0000437 - male sterility, TO:0000207 - plant height, TO:0000202 - germination ratio, TO:0000345 - seed viability, TO:0000655 - leaf development trait, TO:0000225 - stamen number","PO:0001050 - leaf development stage ",{"$nulls":4},"Os03g0425000","Os08g0407200",-1.1862564,0,null,"RLCK153","OsRLCK153","RECEPTOR-LIKE CYTOPLASMIC KINASE 153","Receptor-like Cytoplasmic Kinase 153",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0503600","LOC_Os04g42480.1",{"$nulls":6},"GH3-2","OsGH3-2, OsGH3.2, GH3.2","GRETCHENHAGEN 3-2","OsGRETCHENHAGEN3-2, GRETCHENHAGEN3-2, GRETCHEN HAGEN3-2",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits,  Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009683 - indoleacetic acid metabolic process, GO:0010252 - auxin homeostasis, GO:0005737 - cytoplasm, GO:0016881 - acid-amino acid ligase activity, GO:0009416 - response to light stimulus, GO:0009733 - response to auxin stimulus, GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0051607 - defense response to virus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0002667 - abscisic acid content, TO:0000345 - seed viability, TO:0000435 - seed longevity, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000135 - leaf length, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root , PO:0009010 - seed , PO:0009066 - anther , PO:0009049 - inflorescence ","Os01g0764800","LOC_Os01g55940.1",{"$nulls":6},"HSP70","OsHSP70, OsEnS-45, EnS-45","HEAT SHOCK PROTEIN 70KD","endosperm-specific gene 45",3," Tolerance and resistance - Stress tolerance","GO:0042026 - protein refolding, GO:0009408 - response to heat, GO:0003773 - heat shock protein activity","TO:0000259 - heat tolerance",null,"Os03g0277300","LOC_Os03g16920.1","Os06g0716702","Os06g0143900","Os09g0441900",3.2746305,1.8199071,null,"qGPP-4-1(t) (gpp4.1)","qGPP-4-1(t) (gpp4.1)","grains per panicle (QTL)-4-1(t)","grains per panicle (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0500600","LOC_Os05g42130",2.6618528,"Os05g0190500","LOC_Os05g10210",0,6.838286,{"$nulls":10},"Os07g0148900","Os12g0603800","Os04g0556500","Os04g0556500",-1.6177063,-1.454739,null,"Os09g0510500",4.8006577,"Os11g0242200",-1.6713899,{"$nulls":17},"Os09g0451000",0,2.1812222,{"$nulls":9},"MIR171C","miR171c, osa-miR171cosa-miR171c-3p osa-miR171c-5p","MICRORNA171C","MICRORNA171c, osa-miRNA171c, delayed heading",4," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0010228 - vegetative to reproductive phase transition, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0048573 - photoperiodism, flowering, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase","TO:0006020 - shoot apical meristem development, TO:0000137 - days to heading, TO:0002616 - flowering time","PO:0020148 - shoot apical meristem , PO:0000037 - shoot apex ","Os04g0623901",{"$nulls":3},"Os01g0134500","Os09g0567400",-1.188919,0,null,"RLCK154","OsRLCK154, STRK1, OsSTRK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 154","Receptor-like Cytoplasmic Kinase 154, salt tolerance receptor-like cytoplasmic kinase 1",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0005886 - plasma membrane, GO:0006979 - response to oxidative stress, GO:0042542 - response to hydrogen peroxide, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000605 - hydrogen peroxide content, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0540900","LOC_Os04g45730.1",{"$nulls":6},"MYBAS1","OsMYBAS1","MYB ALTERNATIVE SPLICING 1","Transcription factor MYBAS1, MYB alternative splicing 1",11," Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0034059 - response to anoxia, GO:0009413 - response to flooding, GO:0009845 - seed germination, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000114 - flooding related trait","PO:0007057 - 0 seed germination stage ","Os11g0700500","LOC_Os11g47460.1, LOC_Os11g47460.4, LOC_Os11g47460.3, LOC_Os11g47460.2",{"$nulls":6},"NTRC","OsNTRC, NtrC, OsGRL15","CHLOROPLAST NADPH THIOREDOXIN REDUCTASE","NADPH thioredoxin reductase, GRX-like protein 15, glutaredoxin-like protein 15, chloroplastic type NTR, chloroplastic type NADPH-dependent thioredoxin reductase",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008047 - enzyme activator activity, GO:0050660 - FAD binding, GO:0009507 - chloroplast, GO:0009570 - chloroplast stroma, GO:0010027 - thylakoid membrane organization, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0010581 - regulation of starch biosynthetic process, GO:0004791 - thioredoxin-disulfide reductase activity, GO:0022900 - electron transport chain, GO:0046686 - response to cadmium ion, GO:0045454 - cell redox homeostasis, GO:0042744 - hydrogen peroxide catabolic process, GO:0019430 - removal of superoxide radicals, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0016671 - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor, GO:0016117 - carotenoid biosynthetic process","TO:0002657 - oxidative stress",null,"Os07g0657900","LOC_Os07g46410.1","Os06g0716703","Os09g0542000","Os01g0702500",2.3082602,1.8170567,null,"qGPP-8-1(t) (gpp8.1)","qGPP-8-1(t) (gpp8.1)","grains per panicle (QTL)-8-1(t)","grains per panicle (QTL)-8-1(t)",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0454000","LOC_Os11g26760",2.6712487,"Os05g0191500","LOC_Os05g10310",0,3.1318233,{"$nulls":10},"Os01g0279100","Os01g0210200","Os07g0489200","Os07g0489200",-4.27325,-2.356139,null,"Os02g0208500",4.800588,"Os01g0778100",-1.671371,{"$nulls":17},"Os03g0123500",4.8892865,3.811927,{"$nulls":9},"MIR394","OsmiR394, miR394, osa-MIR394","MICRORNA394","MICRORNA394",2," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Other","GO:0048366 - leaf development, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0009733 - response to auxin stimulus, GO:0051510 - regulation of unidimensional cell growth, GO:0001558 - regulation of cell growth, GO:0050832 - defense response to fungus","TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0002688 - leaf lamina joint bending",{"$nulls":5},"Os05g0382600","Os03g0270700",-1.2140936,0,null,"RLCK155","OsRLCK155","RECEPTOR-LIKE CYTOPLASMIC KINASE 155","Receptor-like Cytoplasmic Kinase 155",4," Reproductive organ - panicle,  Seed","GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0543000","LOC_Os04g45920.1",{"$nulls":6},"SBE3","SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III, OsSBEIIb, SBEIIb","STARCH BRANCHING ENZYME 3","starch branching enzyme3, starch branching enzyme 3, Starch branching enzyme III, Starch branching enzyme-3, starch branching enzyme IIb, branching enzyme-3, Q-enzyme IIa, starch Branching enzyme isoform Type B, Branching enzyme isoform Type B, BE isoform type B",2," Seed - Morphological traits - Endosperm,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances","GO:0010021 - amylopectin biosynthetic process, GO:0009501 - amyloplast, GO:0009568 - amyloplast starch grain, GO:0019252 - starch biosynthetic process, GO:0003844 - 1,4-alpha-glucan branching enzyme activity, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005982 - starch metabolic process, GO:0005976 - polysaccharide metabolic process","TO:0000489 - carbohydrate composition related trait, TO:0000097 - amylopectin content, TO:0000196 - amylose content, TO:0000462 - gelatinization temperature, TO:0000409 - peak viscosity, TO:0000412 - setback viscosity, TO:0000374 - breakdown viscosity, TO:0000696 - starch content, TO:0000333 - sugar content, TO:0000604 - fat and essential oil content, TO:0002673 - amino acid content, TO:0000011 - nitrogen sensitivity","PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os02g0528200","LOC_Os02g32660.2, LOC_Os02g32660.1",{"$nulls":6},"ACO7","OsACO7","AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 7","ACC oxidase 7",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium, GO:0009693 - ethylene biosynthetic process","TO:0000175 - bacterial blight disease resistance",null,"Os01g0580500","LOC_Os01g39860.1","Os10g0209700","Os01g0864500","Os06g0661800",0,1.7923781,null,"qGPP-9-1(t) (gpp9.1)","qGPP-9-1(t) (gpp9.1)","grains per panicle (QTL)-9-1(t)","grains per panicle (QTL)-9-1(t)",9," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0690000","LOC_Os02g46473",2.6725676,"Os05g0192100","LOC_Os05g10370",0,2.9939125,{"$nulls":10},"Os03g0592500","Os03g0183200","Os02g0689200","Os02g0689200",-1.1945983,-1.1932411,null,"Os04g0667200",4.795489,"Os01g0748200",-1.6646973,{"$nulls":17},"Os02g0220400",0,1.3303136,{"$nulls":9},"MIR1848","miR1848, osa-miR1848, osa-MIR1848","MICRORNA1848","MICRORNA1848, osa-miRNA1848",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009651 - response to salt stress, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0009414 - response to water deprivation, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0007623 - circadian rhythm","TO:0000053 - pollen sterility, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0006031 - inflorescence size, TO:0000445 - seed number, TO:0000207 - plant height",{"$nulls":5},"Os03g0856700","Os05g0565900",-1.2161306,0,null,"RLCK156","OsRLCK156","RECEPTOR-LIKE CYTOPLASMIC KINASE 156","Receptor-like Cytoplasmic Kinase 156",4," Reproductive organ - panicle","GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0548400","LOC_Os04g46320.1",{"$nulls":6},"WX1","wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI, GSS, OsWx","GLUTINOUS ENDOSPERM","glutinous endosperm, waxy, Waxy, WAXY, \\Granule-bound starch synthase 1, chloroplastic/amyloplastic\\\", Granule-bound starch synthase I, UDP-glycogen synthase, \\\"Granule-bound starch synthase, chloroplast precursor\\\", glycogen [starch] synthase, Granule-bound glycogen synthase, UDPG-glycogen transglucosylase, uridine diphosphoglucose-glycogen glucosyltransferase, glycogen [starch] synthetase, Granule-bound glycogen [starch] synthase, UDPG-glycogen synthetase, granule bound starch synthase I, granule-bound starch synthase 1, granule-bound starch synthase I\"",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0010229 - inflorescence development, GO:0009507 - chloroplast, GO:0005982 - starch metabolic process, GO:0009011 - starch synthase activity, GO:0009501 - amyloplast, GO:0004373 - glycogen (starch) synthase activity, GO:0009568 - amyloplast starch grain, GO:0019252 - starch biosynthetic process, GO:0033840 - NDP-glucose-starch glucosyltransferase activity, GO:0009845 - seed germination, GO:0009536 - plastid, GO:0009415 - response to water, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009413 - response to flooding","TO:0000098 - glutinous endosperm, TO:0000196 - amylose content, TO:0000162 - seed quality, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000286 - submergence sensitivity, TO:0000621 - inflorescence development trait, TO:0000259 - heat tolerance, TO:0000011 - nitrogen sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0009089 - endosperm , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage , PO:0001083 - inflorescence development stage , PO:0007632 - seed maturation stage ","Os06g0133000","LOC_Os06g04200.4, LOC_Os06g04200.3, LOC_Os06g04200.2, LOC_Os06g04200.1",{"$nulls":6},"CIPK01","OsCIPK01, CIPK1, OsCIPK1, OsSnRK3.3, SnRK3.3","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 1","CBL-interacting protein kinase 1, Sucrose nonfermenting-1-related protein kinase 3.3",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction, GO:0030145 - manganese ion binding, GO:0004713 - protein tyrosine kinase activity, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding","TO:0000432 - temperature response trait, TO:0000114 - flooding related trait, TO:0000303 - cold tolerance",null,"Os01g0292200","LOC_Os01g18800.5, LOC_Os01g18800.4, LOC_Os01g18800.3, LOC_Os01g18800.1, LOC_Os01g18800.2","Os05g0156500","Os02g0532500","Os01g0225600",0,1.7882758,null,"qGPP-11-1(t) (gpp11.1)","qGPP-11-1(t) (gpp11.1)","grains per panicle (QTL)-11-1(t)","grains per panicle (QTL)-11-1(t)",11," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0139100","LOC_Os05g04740",2.685197,"Os05g0227600","LOC_Os05g13940",0,3.817176,{"$nulls":10},"Os08g0435900","Os09g0369500","Os11g0490600","Os11g0490600",6.2186036,3.9044907,null,"Os02g0635800",4.7890244,"Os06g0514800",-1.6636208,{"$nulls":17},"Os02g0810900",0,2.6135428,{"$nulls":9},"HMA5","OsHMA8, osHMA5, HMA8, OsHMP27, HMP27","HEAVY METAL ATPASE 5","heavy metal ATPase 8, heavy metal ATPase 5, heavy metal P-Type ATPase 5, Heavy metal-associated protein 27",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity","GO:0005507 - copper ion binding, GO:0010288 - response to lead ion, GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0046688 - response to copper ion, GO:0016020 - membrane, GO:0005524 - ATP binding, GO:0016021 - integral to membrane, GO:0043682 - copper-transporting ATPase activity, GO:0010232 - vascular transport, GO:0015994 - chlorophyll metabolic process, GO:0006825 - copper ion transport","TO:0000540 - leaf area, TO:0000552 - shoot dry weight, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000605 - hydrogen peroxide content, TO:0000326 - leaf color, TO:0000227 - root length, TO:0000078 - root dry weight, TO:0000576 - stem length, TO:0000021 - copper sensitivity, TO:0000351 - zinc sensitivity",null,"Os04g0556000","LOC_Os04g46940.1",null,null,"Os05g0447200","Os08g0206900",-1.2175723,0,null,"RLCK157","OsRLCK157","RECEPTOR-LIKE CYTOPLASMIC KINASE 157","Receptor-like Cytoplasmic Kinase 157",4," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0563900","LOC_Os04g47620.1",{"$nulls":6},"ISA1","OsISA1, ISA, OsISA, PHS8, PHS8/ISA1, ISA I, OsISA I, ISAI, OsISAI","ISOAMYLASE 1","isoamylase 1, isoamylase1, sugary-1, pre-harvest sprouting 8",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances","GO:0043169 - cation binding, GO:0019156 - isoamylase activity, GO:0009960 - endosperm development, GO:0019252 - starch biosynthetic process, GO:0010029 - regulation of seed germination, GO:0010231 - maintenance of seed dormancy, GO:0005980 - glycogen catabolic process, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0048623 - seed germination on parent plant","TO:0000099 - sugary endosperm, TO:0002658 - starch grain synthesis, TO:0000734 - grain length, TO:0000399 - grain thickness, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity","PO:0007632 - seed maturation stage ","Os08g0520900","LOC_Os08g40930.1",{"$nulls":6},"CIPK02","OsCIPK02, CIPK2, OsCIPK2, OsSnRK3.26, SnRK3.26","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 2","CBL-interacting protein kinase 2, Sucrose nonfermenting-1-related protein kinase 3.26",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0044136 - development of symbiont on or near host rhizosphere, GO:0019740 - nitrogen utilization, GO:0007165 - signal transduction, GO:0006468 - protein amino acid phosphorylation, GO:0042594 - response to starvation, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000495 - chlorophyll content, TO:0001027 - net photosynthetic rate, TO:0000644 - relative root dry weight, TO:0000371 - yield trait, TO:0000636 - relative shoot dry weight, TO:0000455 - seed set percent, TO:0000152 - panicle number",null,"Os07g0678600","LOC_Os07g48100.1","Os06g0115300","Os03g0808600","Os05g0480200",0,1.7853955,null,"qGPP-12-1(t) (gpp12.1)","qGPP-12-1(t) (gpp12.1)","grains per panicle (QTL)-12-1(t)","grains per panicle (QTL)-12-1(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0438100","LOC_Os09g26670",2.6970565,"Os05g0232200","LOC_Os05g14270",0,4.457756,{"$nulls":10},"Os07g0556200","Os05g0495700","Os05g0556400","Os05g0556400",4.9319777,5.386839,null,"Os11g0275500",4.7777877,"Os06g0513050",-1.6636208,{"$nulls":17},"Os02g0698000",0,2.9928296,{"$nulls":9},"_","ONI3","_","ONION3, ONION 3",9," Biochemical character,  Vegetative organ - Leaf","GO:0050660 - FAD binding, GO:0042759 - long-chain fatty acid biosynthetic process, GO:0010430 - fatty acid omega-oxidation, GO:0048366 - leaf development, GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors, GO:0048367 - shoot development","TO:0000655 - leaf development trait, TO:0000654 - shoot development trait, TO:0000135 - leaf length","PO:0007033 - whole plant development stage , PO:0000037 - shoot apex , PO:0001050 - leaf development stage , PO:0007112 - 1 main shoot growth stage ","Os09g0363900","LOC_Os09g19930.1",null,null,"Os08g0532200","Os08g0422600",-1.2176208,0,null,"RLCK158","OsRLCK158","RECEPTOR-LIKE CYTOPLASMIC KINASE 158","Receptor-like Cytoplasmic Kinase 158",4," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0584100","LOC_Os04g49460.1",{"$nulls":6},"SSI","OsSSI, SSS 1, SSS1, SS1, OsSS1, SSSI, OsSSSI","SOLUBLE STARCH SYNTHASE I","Starch synthase-I, \\Soluble starch synthase 1, chloroplastic/amyloplastic\\\", Starch synthase I\"",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009011 - starch synthase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0019252 - starch biosynthetic process, GO:0009413 - response to flooding","TO:0000488 - seed composition based quality trait, TO:0000286 - submergence sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009010 - seed , PO:0009089 - endosperm , PO:0025034 - leaf , PO:0007632 - seed maturation stage ","Os06g0160700","LOC_Os06g06560.1",{"$nulls":6},"CIPK04","OsCIPK04, CIPK4, OsCIPK4, OsSnRK3.35, SnRK3.35","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 4","CBL-interacting protein kinase 4, Sucrose nonfermenting-1-related protein kinase 3.35",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction, GO:0030145 - manganese ion binding","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance",null,"Os12g0603700","LOC_Os12g41090.1","Os08g0499300","Os06g0133000","Os02g0731700",0,1.7829956,null,"qGPP-12-2(t) (gpp12.2)","qGPP-12-2(t) (gpp12.2)","grains per panicle (QTL)-12-2(t)","grains per panicle (QTL)-12-2(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0320500","LOC_Os06g21590",2.7043002,"Os05g0247100","LOC_Os05g15770",0,2.9267607,{"$nulls":10},"Os09g0346500","Os02g0566800","Os09g0555100","Os09g0555100",3.4082623,4.1791673,null,"Os04g0538900",4.7726855,"Os05g0463800",-1.6632209,{"$nulls":17},"Os03g0175600",0,1.0514646,{"$nulls":9},"IDD2","OsIDD2","INDETERMINATE DOMAIN 2","indeterminate domain 2",1," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0008270 - zinc ion binding, GO:0003676 - nucleic acid binding","TO:0000731 - lignin content, TO:0000207 - plant height, TO:0006036 - stem elongation","PO:0007089 - stem elongation stage ","Os01g0195000","LOC_Os01g09850.3, LOC_Os01g09850.2, LOC_Os01g09850.1",null,null,"Os09g0380200","Os09g0471900",-1.2242223,0,null,"RLCK160","OsRLCK160, PTK6, OsPTK6","RECEPTOR-LIKE CYTOPLASMIC KINASE 160","Receptor-like Cytoplasmic Kinase 160, Protein Tyrosine Kinase 6",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os04g0619400","LOC_Os04g52840.1, LOC_Os04g52840.2",{"$nulls":6},"AGPS2","OsAGPS2a, AGPS2A, AGPS2B, OsAGPS2, osagps2, APS2, APS2a, APS2b, AGPS2a, APGS2b, OsAGPS2b, AGPP, GAS8, OsAPS2, OsAPS2a, OsAPS2b","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 2","sativa ADP-glucose pyrophosphorylase small subunit 2a, sativa ADP-glucose pyrophosphorylase small subunit 2, ADP-glucose Pyrophosphorylase small subunit 2, AGPase small subunit 2, ADP-glucose\npyrophosphorylase small subunit 2a, ADP-glucose pyrophosphorylase 51kD subunit, ADP-glucose pyrophosphorylase small unit 2, ADP-glucose pyrophosphorylase small subunit 2b",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0005978 - glycogen biosynthetic process, GO:0005982 - starch metabolic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009415 - response to water","TO:0002661 - seed maturation, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000100 - shrunken endosperm, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000011 - nitrogen sensitivity","PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os08g0345800","LOC_Os08g25734.2, LOC_Os08g25734.1",{"$nulls":6},"CIPK05","OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.2","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5","CBL-interacting protein kinase 5, Sucrose nonfermenting-1-related protein kinase 3.2",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006468 - protein amino acid phosphorylation, GO:0030145 - manganese ion binding, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding, GO:0007165 - signal transduction, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000114 - flooding related trait","PO:0009066 - anther ","Os01g0206700","LOC_Os01g10890.1","Os11g0704500","Os06g0716700","Os12g0628400",2.3686078,1.7793636,null,"qGW-1-1(t) (gw1.1)","qGW-1-1(t) (gw1.1)","grain weight (QTL)-1-1(t)","grain weight (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0320501","LOC_Os06g21591",{"$error":"#N/A"},"Os05g0247101","LOC_Os05g15771",1,{"$error":"#N/A"},{"$nulls":10},"Os09g0346501","Os02g0566801","Os05g0447200","Os05g0447200",1.8482307,1.2837814,null,"Os04g0538901",5.7726855,"Os05g0463801",-0.6632209,{"$nulls":17},"Os06g0264200",0,2.6492913,{"$nulls":9},"IDD3","OsIDD3","INDETERMINATE DOMAIN 3","indeterminate domain 3",2," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0008270 - zinc ion binding, GO:0003676 - nucleic acid binding","TO:0000731 - lignin content, TO:0000207 - plant height, TO:0006036 - stem elongation","PO:0007089 - stem elongation stage ","Os01g0195001","LOC_Os01g09850.3, LOC_Os01g09850.2, LOC_Os01g09850.2",null,null,"Os09g0380201","Os09g0471901",-0.2242223,1,null,"RLCK161","OsRLCK160, PTK6, OsPTK7","RECEPTOR-LIKE CYTOPLASMIC KINASE 161","Receptor-like Cytoplasmic Kinase 160, Protein Tyrosine Kinase 7",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os04g0619401","LOC_Os04g52840.1, LOC_Os04g52840.3",{"$nulls":6},"AGPS3","OsAGPS2a, AGPS2A, AGPS2B, OsAGPS2, osagps2, APS2, APS2a, APS2b, AGPS2a, APGS2b, OsAGPS2b, AGPP, GAS8, OsAPS2, OsAPS2a, OsAPS2b","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 3","sativa ADP-glucose pyrophosphorylase small subunit 2a, sativa ADP-glucose pyrophosphorylase small subunit 2, ADP-glucose Pyrophosphorylase small subunit 2, AGPase small subunit 2, ADP-glucose\npyrophosphorylase small subunit 2a, ADP-glucose pyrophosphorylase 51kD subunit, ADP-glucose pyrophosphorylase small unit 2, ADP-glucose pyrophosphorylase small subunit 2b",9," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0005978 - glycogen biosynthetic process, GO:0005982 - starch metabolic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009415 - response to water","TO:0002661 - seed maturation, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000100 - shrunken endosperm, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000011 - nitrogen sensitivity","PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os08g0345801","LOC_Os08g25734.2, LOC_Os08g25734.2",{"$nulls":6},"CIPK06","OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.3","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 6","CBL-interacting protein kinase 5, Sucrose nonfermenting-1-related protein kinase 3.3",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006468 - protein amino acid phosphorylation, GO:0030145 - manganese ion binding, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding, GO:0007165 - signal transduction, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000114 - flooding related trait","PO:0009066 - anther ","Os01g0206701","LOC_Os01g10890.2","Os02g0526400","Os06g0716701","Os12g0628401",3.3686078,2.7793636,null,"qGW-1-1(t) (gw1.1)","qGW-1-1(t) (gw1.1)","grain weight (QTL)-1-1(t)","grain weight (QTL)-1-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0320502","LOC_Os06g21592",{"$error":"#N/A"},"Os05g0247102","LOC_Os05g15772",2,{"$error":"#N/A"},{"$nulls":10},"Os09g0346502","Os02g0566802","Os11g0169200","Os11g0169200",1.594853,2.4397767,null,"Os04g0538902",6.7726855,"Os05g0463802",0.3367791,{"$nulls":17},"Os03g0135700",5.4800797,2.1326425,{"$nulls":9},"IDD4","OsIDD4","INDETERMINATE DOMAIN 4","indeterminate domain 4",3," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0008270 - zinc ion binding, GO:0003676 - nucleic acid binding","TO:0000731 - lignin content, TO:0000207 - plant height, TO:0006036 - stem elongation","PO:0007089 - stem elongation stage ","Os01g0195002","LOC_Os01g09850.3, LOC_Os01g09850.2, LOC_Os01g09850.3",null,null,"Os09g0380202","Os09g0471902",0.7757777,2,null,"RLCK162","OsRLCK160, PTK6, OsPTK8","RECEPTOR-LIKE CYTOPLASMIC KINASE 162","Receptor-like Cytoplasmic Kinase 160, Protein Tyrosine Kinase 8",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os04g0619402","LOC_Os04g52840.1, LOC_Os04g52840.4",{"$nulls":6},"AGPS4","OsAGPS2a, AGPS2A, AGPS2B, OsAGPS2, osagps2, APS2, APS2a, APS2b, AGPS2a, APGS2b, OsAGPS2b, AGPP, GAS8, OsAPS2, OsAPS2a, OsAPS2b","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 4","sativa ADP-glucose pyrophosphorylase small subunit 2a, sativa ADP-glucose pyrophosphorylase small subunit 2, ADP-glucose Pyrophosphorylase small subunit 2, AGPase small subunit 2, ADP-glucose\npyrophosphorylase small subunit 2a, ADP-glucose pyrophosphorylase 51kD subunit, ADP-glucose pyrophosphorylase small unit 2, ADP-glucose pyrophosphorylase small subunit 2b",10," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0005978 - glycogen biosynthetic process, GO:0005982 - starch metabolic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009415 - response to water","TO:0002661 - seed maturation, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000100 - shrunken endosperm, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000011 - nitrogen sensitivity","PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os08g0345802","LOC_Os08g25734.2, LOC_Os08g25734.3",{"$nulls":6},"CIPK07","OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.4","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 7","CBL-interacting protein kinase 5, Sucrose nonfermenting-1-related protein kinase 3.4",3," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006468 - protein amino acid phosphorylation, GO:0030145 - manganese ion binding, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding, GO:0007165 - signal transduction, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000114 - flooding related trait","PO:0009066 - anther ","Os01g0206702","LOC_Os01g10890.3","Os10g0500700","Os06g0716702","Os12g0628402",4.3686078,3.7793636,null,"qGW-1-1(t) (gw1.1)","qGW-1-1(t) (gw1.1)","grain weight (QTL)-1-1(t)","grain weight (QTL)-1-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0320503","LOC_Os06g21593",{"$error":"#N/A"},"Os05g0247103","LOC_Os05g15773",3,{"$error":"#N/A"},{"$nulls":10},"Os09g0346503","Os02g0566803","Os03g0172000","Os03g0172000",-1.591598,-1.3587781,null,"Os04g0538903",7.7726855,"Os05g0463803",1.3367791,{"$nulls":17},"Os02g0833900",5.081926,3.2200165,{"$nulls":9},"IDD5","OsIDD5","INDETERMINATE DOMAIN 5","indeterminate domain 5",4," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0008270 - zinc ion binding, GO:0003676 - nucleic acid binding","TO:0000731 - lignin content, TO:0000207 - plant height, TO:0006036 - stem elongation","PO:0007089 - stem elongation stage ","Os01g0195003","LOC_Os01g09850.3, LOC_Os01g09850.2, LOC_Os01g09850.4",null,null,"Os09g0380203","Os09g0471903",1.7757777,3,null,"RLCK163","OsRLCK160, PTK6, OsPTK9","RECEPTOR-LIKE CYTOPLASMIC KINASE 163","Receptor-like Cytoplasmic Kinase 160, Protein Tyrosine Kinase 9",7," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os04g0619403","LOC_Os04g52840.1, LOC_Os04g52840.5",{"$nulls":6},"AGPS5","OsAGPS2a, AGPS2A, AGPS2B, OsAGPS2, osagps2, APS2, APS2a, APS2b, AGPS2a, APGS2b, OsAGPS2b, AGPP, GAS8, OsAPS2, OsAPS2a, OsAPS2b","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 5","sativa ADP-glucose pyrophosphorylase small subunit 2a, sativa ADP-glucose pyrophosphorylase small subunit 2, ADP-glucose Pyrophosphorylase small subunit 2, AGPase small subunit 2, ADP-glucose\npyrophosphorylase small subunit 2a, ADP-glucose pyrophosphorylase 51kD subunit, ADP-glucose pyrophosphorylase small unit 2, ADP-glucose pyrophosphorylase small subunit 2b",11," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0005978 - glycogen biosynthetic process, GO:0005982 - starch metabolic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009415 - response to water","TO:0002661 - seed maturation, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000100 - shrunken endosperm, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000011 - nitrogen sensitivity","PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os08g0345803","LOC_Os08g25734.2, LOC_Os08g25734.4",{"$nulls":6},"CIPK08","OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.5","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 8","CBL-interacting protein kinase 5, Sucrose nonfermenting-1-related protein kinase 3.5",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006468 - protein amino acid phosphorylation, GO:0030145 - manganese ion binding, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding, GO:0007165 - signal transduction, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000114 - flooding related trait","PO:0009066 - anther ","Os01g0206703","LOC_Os01g10890.4","Os05g0460000","Os06g0716703","Os12g0628403",5.3686078,4.7793636,null,"qGW-1-1(t) (gw1.1)","qGW-1-1(t) (gw1.1)","grain weight (QTL)-1-1(t)","grain weight (QTL)-1-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0271700","LOC_Os12g17320",2.7686508,"Os05g0426800","LOC_Os05g35230",0,3.722933,{"$nulls":10},"Os02g0101500","Os08g0535800","Os01g0547600","Os01g0547600",-1.7720733,-1.1524473,null,"Os12g0106300",4.7552133,"Os01g0877900",-1.6590228,{"$nulls":17},"Os05g0550300",4.8264666,6.0061736,{"$nulls":9},"_","OsGASR1, GASR1","_","GAST (GA-stimulated transcript) homolog 1, GAST homolog 1, GA-stimulated transcript homolog 1, GA-stimulated transcript-related gene 1",3," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf","GO:0009737 - response to abscisic acid stimulus, GO:0048046 - apoplast, GO:0009826 - unidimensional cell growth, GO:0009739 - response to gibberellin stimulus, GO:0008283 - cell proliferation, GO:0010229 - inflorescence development, GO:0009411 - response to UV, GO:0005618 - cell wall, GO:0009651 - response to salt stress","TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000135 - leaf length, TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000615 - abscisic acid sensitivity","PO:0020148 - shoot apical meristem , PO:0020147 - root apical meristem , PO:0020123 - root cap , PO:0000055 - bud , PO:0000005 - cultured plant cell , PO:0001083 - inflorescence development stage ","Os03g0760800","LOC_Os03g55290.1",null,null,"Os05g0567300","Os03g0215900",-1.2779297,0,null,"RLCK168","OsRLCK168","RECEPTOR-LIKE CYTOPLASMIC KINASE 168","Receptor-like Cytoplasmic Kinase 168",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0655300","LOC_Os04g56110.1, LOC_Os04g56110.2, LOC_Os04g56110.3",{"$nulls":6},"DREB1A","OsDREB1A, Os DREB1A, CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24, OsERF024, OsERF#024, AP2/EREBP#114, AP2/EREBP114, OsDREBL","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A","Dehydration-responsive element-binding protein 1A, Protein DREB1A, Protein C-repeat-binding factor 3, ethylene response factor 24, APETALA2/ethylene-responsive element binding protein 114",9," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0009408 - response to heat, GO:0009845 - seed germination, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009409 - response to cold, GO:0009611 - response to wounding, GO:0009651 - response to salt stress, GO:0009609 - response to symbiotic bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0006950 - response to stress, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus","TO:0000164 - stress trait, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance","PO:0007022 - seed imbibition stage ","Os09g0522200","LOC_Os09g35030.1",{"$nulls":6},"CIPK09","OsCIPK09, CIPK9, OsCIPK9, OsSnRK3.10, SnRK3.10","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 9","CBL-interacting protein kinase 9, Sucrose nonfermenting-1-related protein kinase 3.10",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction, GO:0060359 - response to ammonium ion, GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000227 - root length",null,"Os03g0126800","LOC_Os03g03510.2, LOC_Os03g03510.1","Os04g0402100","Os10g0209700","Os01g0917400",0,1.7494059,null,"qGW-5-3(t) (gw5.1)","qGW-5-3(t) (gw5.1)","grain weight (QTL)-5-3(t)","grain weight (QTL)-5-3(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0419800","LOC_Os05g34700",2.8321915,"Os05g0450300","LOC_Os05g37780",0,-1.4306365,{"$nulls":10},"Os10g0461400","Os08g0473900","Os01g0919800","Os01g0919800",-4.09928,-2.1748767,null,"Os07g0645000",4.7497783,"Os01g0828300",-1.658373,{"$nulls":17},"Os09g0422500",3.34322,1.567009,{"$nulls":9},"_","RAVL1, RAVL, OsRAVL1","_","RAV-Like1, RAV-like 1 protein, RAV-LIKE 1",4," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Other","GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0009961 - response to 1-aminocyclopropane-1-carboxylic acid, GO:0010104 - regulation of ethylene mediated signaling pathway, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0009733 - response to auxin stimulus","TO:0000227 - root length, TO:0000255 - sheath blight disease resistance, TO:0000326 - leaf color, TO:0000206 - leaf angle",null,"Os04g0581400","LOC_Os04g49230.1",null,null,"Os02g0125700","Os12g0641400",-1.2934047,0,null,"RLCK173","OsRLCK173, OsBSK3, BSK3","RECEPTOR-LIKE CYTOPLASMIC KINASE 173","Receptor-like Cytoplasmic Kinase 173, BR-signaling kinase 3, brassinosteroid-signaling kinase 3, brassinosteroid-SIGNALING KINASE 3",4," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0004672 - protein kinase activity, GO:0050832 - defense response to fungus, GO:0009742 - brassinosteroid mediated signaling, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0002677 - brassinosteroid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0684200","LOC_Os04g58750.4, LOC_Os04g58750.3, LOC_Os04g58750.2, LOC_Os04g58750.1",{"$nulls":6},"LEA3-1","OsLEA3-1, OsLea3-1, LEA3, OsLEA3, OsLEA19, OsLEA19a, LEA19, OsLEA19b, OsLEA3, Oslea3, oslea3, OsLEA3A, LEA3A","LATE EMBRYOGENESIS ABUNDANT 3-1","Late embryogenesis abundant protein 3, late embryogenesis abundant protein 19, Group 3 LEA (type I) protein",5," Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009738 - abscisic acid mediated signaling, GO:0009411 - response to UV, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000303 - cold tolerance, TO:0000507 - osmotic adjustment capacity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance, TO:0000160 - UV light sensitivity",null,"Os05g0542500 ","LOC_Os05g46480.4, LOC_Os05g46480.3, LOC_Os05g46480.1, LOC_Os05g46480.2",{"$nulls":6},"CIPK10","OsCIPK10, OsSnRK3.12, SnRK3.12","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 10","CBL-interacting protein kinase 10, Sucrose nonfermenting-1-related protein kinase 3.12",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0007165 - signal transduction, GO:0030145 - manganese ion binding","TO:0000276 - drought tolerance",null,"Os03g0339900","LOC_Os03g22050.4, LOC_Os03g22050.1, LOC_Os03g22050.2, LOC_Os03g22050.3","Os03g0852300","Os05g0156500","Os06g0472000",0,1.7438723,null,"qGW-9-1(t) (gw9.1)","qGW-9-1(t) (gw9.1)","grain weight (QTL)-9-1(t)","grain weight (QTL)-9-1(t)",9," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0192000","LOC_Os01g09620",2.8330657,"Os05g0460000","LOC_Os05g38530",0,-1.8242869,{"$nulls":10},"Os08g0504500","Os11g0525600","Os01g0224700","Os01g0224700",-4.1785526,-3.0126324,null,"Os11g0622150",4.7480226,"Os02g0740300",-1.6577975,{"$nulls":17},"Os05g0515600",8.009467,5.9088807,{"$nulls":9},"CPN60BETA1","OsCPn60beta1, OsCPn60b1, CPn60b1","CHAPERONIN 60 BETA SUBUNIT 1","chaperonin 60 beta subunit 1",6," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0015977 - carbon utilization by fixation of carbon dioxide, GO:0009658 - chloroplast organization, GO:0005524 - ATP binding, GO:0015979 - photosynthesis, GO:0009507 - chloroplast, GO:0042026 - protein refolding, GO:0005737 - cytoplasm","TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait",null,"Os06g0114000","LOC_Os06g02380.1, LOC_Os06g02380.2",null,null,"Os06g0703500","Os04g0206700",-1.2966986,0,null,"RLCK174","OsRLCK174","RECEPTOR-LIKE CYTOPLASMIC KINASE 174","Receptor-like Cytoplasmic Kinase 174",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0016021 - integral to membrane, GO:0048316 - seed development, GO:0050832 - defense response to fungus","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0685900","LOC_Os04g58910.1",{"$nulls":6},"BUI1","BUI1, FH5, FH5/BUI1, RMD, OsFH5, FH5/RMD","BENT UPPERMOST INTERNODE 1","BENT UPPERMOST INTERNODE1, class II formin FH5, Rice Morphology Determinant, formin homology 5, Type II Formin FH5, forming family protein 5, FH2 protein 5, FH2 domain protein 5, rice morphology determinant1-1",7," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0003779 - actin binding, GO:0004721 - phosphoprotein phosphatase activity, GO:0030036 - actin cytoskeleton organization, GO:0060627 - regulation of vesicle-mediated transport, GO:0001558 - regulation of cell growth, GO:0009733 - response to auxin stimulus, GO:0000902 - cell morphogenesis, GO:0009507 - chloroplast, GO:0009826 - unidimensional cell growth, GO:0030041 - actin filament polymerization, GO:0051017 - actin filament bundle formation, GO:0051016 - barbed-end actin filament capping, GO:0008017 - microtubule binding, GO:0001578 - microtubule bundle formation, GO:0051125 - regulation of actin nucleation, GO:0000226 - microtubule cytoskeleton organization, GO:0009941 - chloroplast envelope, GO:0009416 - response to light stimulus, GO:0032922 - circadian regulation of gene expression, GO:0009959 - negative gravitropism","TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000268 - inflorescence shape, TO:0000484 - seed shape, TO:0000262 - panicle shape, TO:0002756 - shoot habit, TO:0000075 - light sensitivity, TO:0000391 - seed size, TO:0000146 - seed length, TO:0000547 - primary branch number, TO:0000207 - plant height, TO:0002710 - root shape, TO:0000043 - root anatomy and morphology trait, TO:0002693 - gravity response trait","PO:0025034 - leaf , PO:0020132 - columella root cap cell ","Os07g0596300","LOC_Os07g40520.1, LOC_Os07g40510.1",{"$nulls":6},"CIPK11","OsCIPK11, OsMSURPK2, MSURPK2, OsSnRK3.7, SnRK3.7","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 11","CBL-interacting protein kinase 11, Sucrose nonfermenting-1-related protein kinase 3.7",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding, GO:0007165 - signal transduction, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation",null,null,"Os01g0824600","LOC_Os01g60910.1, LOC_Os01g60910.2","Os05g0245700","Os06g0115300","Os05g0204600",0,1.7392745,null,"qGW-10-1(t) (gw10.1)","qGW-10-1(t) (gw10.1)","grain weight (QTL)-10-1(t)","grain weight (QTL)-10-1(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0294600","LOC_Os06g19070",2.8447745,"Os05g0464300","LOC_Os05g38880",0,-1.0324746,{"$nulls":10},"Os02g0197600","Os01g0360200","Os12g0541300","Os12g0541300",5.8683686,2.361488,null,"Os02g0590400",4.74621,"Os12g0438300",-1.657742,{"$nulls":17},"Os03g0123500",4.8892865,3.811927,{"$nulls":9},"EIF3E","eIF-3e, OseIF3e","EUKARYOTIC INITIATION FACTOR 3E","Eukaryotic translation initiation factor 3 subunit e",7," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0010152 - pollen maturation, GO:0010555 - response to mannitol stimulus, GO:0006446 - regulation of translational initiation, GO:0005852 - eukaryotic translation initiation factor 3 complex, GO:0003743 - translation initiation factor activity, GO:0001731 - formation of translation preinitiation complex, GO:0016282 - eukaryotic 43S preinitiation complex, GO:0033290 - eukaryotic 48S preinitiation complex","TO:0000269 - 100-seed weight, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000399 - grain thickness, TO:0000040 - panicle length, TO:0000262 - panicle shape, TO:0000207 - plant height, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000734 - grain length, TO:0000456 - spikelet number",null,"Os07g0222300","LOC_Os07g12110.1",null,null,"Os01g0233000","Os08g0537800",-1.2991232,0,null,"RLCK175","OsRLCK175","RECEPTOR-LIKE CYTOPLASMIC KINASE 175","Receptor-like Cytoplasmic Kinase 175",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0100700","LOC_Os05g01040.1, LOC_Os05g01040.2, LOC_Os05g01040.3, LOC_Os05g01040.4",{"$nulls":6},"qSD-4-1(t) (qSD4)","qSD-4-1(t) (qSD4)","seed dormancy (QTL)-4-1(t)","seed dormancy (QTL)-4-1(t)",4," Seed - Physiological traits - Dormancy",{"$nulls":11},"CIPK14","OsCIPK14, OsSnRK3.33, SnRK3.33","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 14","CBL-interacting protein kinase 14, Sucrose nonfermenting-1-related protein kinase 3.33",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0060359 - response to ammonium ion, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0030145 - manganese ion binding, GO:0006468 - protein amino acid phosphorylation, GO:0009413 - response to flooding","TO:0000114 - flooding related trait",null,"Os12g0113500","LOC_Os12g02200.2, LOC_Os12g02200.1","Os08g0562200","Os08g0499300","Os04g0390100",2.508571,1.7338842,null,"qGW-12-1(t) (gw12.1)","qGW-12-1(t) (gw12.1)","grain weight (QTL)-12-1(t)","grain weight (QTL)-12-1(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0160100","LOC_Os07g06620",2.8481522,"Os05g0500400","LOC_Os05g42100",0,1.9572873,{"$nulls":10},"Os09g0411650","Os05g0227600","Os02g0640500","Os02g0640500",3.5286038,1.3651978,null,"Os01g0881300",4.745487,"Os01g0889601",-1.6527287,{"$nulls":17},"Os03g0135700",5.4800797,2.1326425,{"$nulls":9},"PPR676","OsPPR676, OsATP4, ATP4","PENTATRICOPEPTIDE REPEAT PROTEIN 676","pentatricopeptide repeat protein 676",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009516 - leucoplast, GO:0009509 - chromoplast, GO:0009555 - pollen development, GO:0009657 - plastid organization, GO:0009409 - response to cold, GO:0016556 - mRNA modification, GO:0019252 - starch biosynthetic process, GO:0016051 - carbohydrate biosynthetic process, GO:0016554 - cytidine to uridine editing, GO:0006633 - fatty acid biosynthetic process, GO:0040007 - growth, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0048653 - anther development, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000135 - leaf length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000371 - yield trait, TO:0000370 - leaf width, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0000326 - leaf color, TO:0002714 - plastid development trait, TO:0000053 - pollen sterility","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0025313 - tapetum ","Os03g0215900","LOC_Os03g11670.1",null,null,"Os01g0195000","Os06g0706400",-1.3119088,0,null,"RLCK177","OsRLCK177","RECEPTOR-LIKE CYTOPLASMIC KINASE 177","Receptor-like Cytoplasmic Kinase 177",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0125300","LOC_Os05g03460.1",{"$nulls":6},"qSD-7-2(t) (qSD7-1)","qSD-7-2(t) (qSD7-1)","seed dormancy (QTL)-7-2(t)","seed dormancy (QTL)-7-2(t)",7," Seed - Physiological traits - Dormancy",{"$nulls":11},"CIPK15","OsCIPK15, OsSnRK3.31, SnRK3.31","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 15","CBL-interacting protein kinase 15, Sucrose nonfermenting-1-related protein kinase 3.31",11," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding","TO:0000114 - flooding related trait",null,"Os11g0113700","LOC_Os11g02240.1","Os01g0246700","Os11g0704500","Os04g0555000",0,1.7134777,null,"qPPL-3-1(t) (ppl3.1)","qPPL-3-1(t) (ppl3.1)","panicles per plant (QTL)-3-1(t)","panicles per plant (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0271500","LOC_Os03g16470",2.849537,"Os05g0515600","LOC_Os05g43940",0,5.9088807,{"$nulls":10},"Os04g0107300","Os03g0329500","Os05g0150800","Os05g0150800",1.7585611,1.8795738,null,"Os03g0567100",4.736645,"Os08g0438400",-1.6525875,{"$nulls":29},"NAL21","cyc07, T151, OsNAL21, OsRPS3A, RPS3A, RPS3aA, OsRPS3aA","NARROW LEAF 21","narrow leaf21, ribosomal protein S3A",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009965 - leaf morphogenesis, GO:0010482 - regulation of epidermal cell division, GO:0009733 - response to auxin stimulus, GO:0003735 - structural constituent of ribosome, GO:0051302 - regulation of cell division, GO:0005783 - endoplasmic reticulum, GO:0005840 - ribosome, GO:0006413 - translational initiation, GO:0032790 - ribosome disassembly, GO:0042255 - ribosome assembly, GO:0001558 - regulation of cell growth, GO:0048366 - leaf development, GO:0045727 - positive regulation of translation, GO:0006412 - translation, GO:0022627 - cytosolic small ribosomal subunit","TO:0000470 - vascular tissue related trait, TO:0000146 - seed length, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000135 - leaf length, TO:0000370 - leaf width","PO:0000055 - bud , PO:0000016 - lateral root primordium , PO:0000025 - root tip , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001050 - leaf development stage ","Os03g0200500","LOC_Os03g10340.1",null,null,"Os03g0826600","Os03g0200500",-1.3408308,0,null,"Z15","OsRLCK181, RLCK181, OsZ15","ZEBRA LEAF 15","Receptor-like Cytoplasmic Kinase 181, Zebra leaf 15",5," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009658 - chloroplast organization, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0048316 - seed development","TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0218400","LOC_Os05g12680.1",{"$nulls":6},"qSD-7-3(t) (qSD7-2)","qSD-7-3(t) (qSD7-2)","seed dormancy (QTL)-7-3(t)","seed dormancy (QTL)-7-3(t)",7," Seed - Physiological traits - Dormancy",{"$nulls":11},"CIPK16","OsCIPK16, OsSnRK3.29, SnRK3.29","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 16","CBL-interacting protein kinase 16, Sucrose nonfermenting-1-related protein kinase 3.29",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os09g0418000","LOC_Os09g25090.1","Os10g0567000","Os02g0526400","Os02g0828600",2.6166303,1.7000703,null,"qPPL-7-1(t) (ppl7.1)","qPPL-7-1(t) (ppl7.1)","panicles per plant (QTL)-7-1(t)","panicles per plant (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0751400","LOC_Os03g54040",2.9028213,"Os05g0527000","LOC_Os05g45100",0,-3.971136,{"$nulls":10},"Os11g0707100","Os01g0827700","Os07g0239400","Os07g0239400",-1.6668768,-1.0277327,null,"Os12g0178000",4.73316,"Os04g0500600",-1.6502976,{"$nulls":29},"WGL2","rps9, OsRPS9, OsWGL2","WHITE GREEN LEAF 2","ribosomal protein S9, chloroplast ribosomal protein S9, plastid ribosomal protein S9, white green leaf 2",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Other","GO:0005840 - ribosome, GO:0009507 - chloroplast, GO:0003735 - structural constituent of ribosome, GO:0006412 - translation, GO:0009658 - chloroplast organization","TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000298 - chlorophyll ratio","PO:0025034 - leaf ","Os03g0769100 ","LOC_Os03g55930.1",null,null,"Os02g0573200","Os10g0403000",-1.3444344,0,null,"RLCK186","OsRLCK186","RECEPTOR-LIKE CYTOPLASMIC KINASE 186","Receptor-like Cytoplasmic Kinase 186",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005576 - extracellular region, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0387700","LOC_Os05g32170.1",{"$nulls":6},"qSD-8-1(t) (qSD8)","qSD-8-1(t) (qSD8)","seed dormancy (QTL)-8-1(t)","seed dormancy (QTL)-8-1(t)",8," Seed - Physiological traits - Dormancy",{"$nulls":11},"CIPK17","OsCIPK17, OsSnRK3.14, SnRK3.14","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 17","CBL-interacting protein kinase 17, Sucrose nonfermenting-1-related protein kinase 3.14",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding, GO:0009414 - response to water deprivation, GO:0006468 - protein amino acid phosphorylation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os05g0136200","LOC_Os05g04550.1","Os06g0354700","Os10g0562100","Os03g0782500",0,1.688983,null,"qYLD-2-1(t) (yld2.1)","qYLD-2-1(t) (yld2.1)","yield per plant (QTL)-2-1(t)","yield per plant (QTL)-2-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0247100","LOC_Os05g15770",2.9267607,"Os05g0548900","LOC_Os05g47540",0,-1.3847553,{"$nulls":10},"Os07g0577600","Os03g0749500","Os06g0551400","Os06g0551400",-1.2561706,-1.1777105,null,"Os11g0150400",4.729543,"Os09g0431050",-1.6487532,{"$nulls":29},"GLCNACTI","GlcNAc-TI, OsGlcNAc-TI, GnTI, OsGnTI","N-ACETYLGLUCOSAMINYLTRANSFERASE I","N-acetylglucosaminyltransferase I",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009736 - cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0030244 - cellulose biosynthetic process, GO:0006491 - N-glycan processing, GO:0042546 - cell wall biogenesis, GO:0006486 - protein amino acid glycosylation, GO:0000139 - Golgi membrane, GO:0003827 - alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","TO:0000167 - cytokinin sensitivity, TO:0006001 - salt tolerance, TO:0000357 - growth and development trait",null,"Os02g0832800","LOC_Os02g58590.1",null,null,"Os04g0484900","Os02g0575700",-1.3882623,0,null,"RLCK189","OsRLCK189, OsSTA156","RECEPTOR-LIKE CYTOPLASMIC KINASE 189","Receptor-like Cytoplasmic Kinase 189",5," Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os05g0498900","LOC_Os05g41950.1",{"$nulls":6},"qSD-12-1(t) (qSD12)","qSD-12-1(t) (qSD12)","seed dormancy (QTL)-12-1(t)","seed dormancy (QTL)-12-1(t)",12," Seed - Physiological traits - Dormancy",{"$nulls":11},"CIPK18","OsCIPK18, OsSnRK3.16, SnRK3.16","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 18","CBL-interacting protein kinase 18, Sucrose nonfermenting-1-related protein kinase 3.16",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0009414 - response to water deprivation, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0030145 - manganese ion binding","TO:0000276 - drought tolerance",null,"Os05g0332300","LOC_Os05g26820.1","Os07g0633200","Os10g0500700","Os12g0106000",0,1.6871611,null,"qYLD-3-1(t) (yld3.1)","qYLD-3-1(t) (yld3.1)","yield per plant (QTL)-3-1(t)","yield per plant (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0652100","LOC_Os01g46350",2.927578,"Os05g0550300","LOC_Os05g47700",0,6.0061736,{"$nulls":10},"Os07g0544800","Os04g0408700","Os01g0716200","Os01g0716200",7.2312036,3.9512074,null,"Os12g0156500",4.722254,"Os09g0357400",-1.6483129,{"$nulls":29},"LAS1","HDR, OsHDR, OsIspH, IspH, OsHDR1, HDR1, OsLAS1, LAS1/OsHMBPP, OsHMBPP, HMBPP","LETHAL ALBINIC SEEDLING 1 ","1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, HMBDP reductase, HMBPP reductase 1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1, HMBDP REDUCTASE, lethal albinic seedling 1",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0008299 - isoprenoid biosynthetic process, GO:0009416 - response to light stimulus, GO:0051538 - 3 iron, 4 sulfur cluster binding, GO:0007623 - circadian rhythm, GO:0042254 - ribosome biogenesis, GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, GO:0015995 - chlorophyll biosynthetic process, GO:0009658 - chloroplast organization, GO:0050992 - dimethylallyl diphosphate biosynthetic process, GO:0046872 - metal ion binding, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009570 - chloroplast stroma","TO:0000075 - light sensitivity, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color","PO:0000003 - whole plant , PO:0009005 - root , PO:0009010 - seed , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os03g0731900","LOC_Os03g52170.1",null,null,"Os08g0503800","Os02g0559800",-1.391642,0,null,"RLCK191","OsRLCK191","RECEPTOR-LIKE CYTOPLASMIC KINASE 191","Receptor-like Cytoplasmic Kinase 191",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0042742 - defense response to bacterium, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development","TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000068 - lodging incidence, TO:0000339 - stem thickness, TO:0000051 - stem strength","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os05g0589700","LOC_Os05g51190.5, LOC_Os05g51190.4, LOC_Os05g51190.2, LOC_Os05g51190.3",{"$nulls":6},"qSH-3-4(t) (qSH3)","qSH-3-4(t) (qSH3)","shattering (QTL)-3-4(t)","shattering (QTL)-3-4(t)",3," Seed - Physiological traits - Shattering",{"$nulls":11},"PK4","OsCIPK19, OsPK4, OsPK04, Os-CIPK19, CIPK19, OsSnRK3.20, SnRK3.20","PROTEIN KINASE 4","protein kinase 4, CBL-interacting protein kinase 19, CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 19, Sucrose nonfermenting-1-related protein kinase 3.20",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009413 - response to flooding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0030145 - manganese ion binding, GO:0007165 - signal transduction","TO:0000114 - flooding related trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os05g0514200","LOC_Os05g43840.1","Os01g0695800","Os01g0675800","Os03g0198600",0,1.6825858,null,"qYLD-3-2(t) (yld3.2)","qYLD-3-2(t) (yld3.2)","yield per plant (QTL)-3-2(t)","yield per plant (QTL)-3-2(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0155400","LOC_Os05g06340",2.987538,"Os05g0555600","LOC_Os05g48200",0,-2.5385206,{"$nulls":10},"Os03g0278900","Os01g0229400","Os10g0539600","Os10g0539600",4.3911285,3.3820488,null,"Os04g0453300",4.72225,"Os08g0163800",-1.6463923,{"$nulls":29},"MCS","OsMCS, IspF, OsIspF, OsMDS, MDS","2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE","2-C-methyl-D-erythritol 2, 4-cyclodiphosphate synthase, MECDP synthase",2," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016114 - terpenoid biosynthetic process, GO:0009416 - response to light stimulus, GO:0046872 - metal ion binding, GO:0009411 - response to UV, GO:0009658 - chloroplast organization, GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity, GO:0009570 - chloroplast stroma, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","TO:0000295 - chlorophyll-b content, TO:0000075 - light sensitivity, TO:0000160 - UV light sensitivity, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000495 - chlorophyll content, TO:0000293 - chlorophyll-a content",null,"Os02g0680600","LOC_Os02g45660.1",null,null,"Os03g0669000","Os01g0315800",-1.3936968,0,null,"RLCK193","OsRLCK193, OsCrRLK1L13, CrRLK1L13, OsMRLK40, MRLK40","RECEPTOR-LIKE CYTOPLASMIC KINASE 193","Receptor-like Cytoplasmic Kinase 193, Catharanthus roseus receptor-like kinase1-like kinase 13, malectin/malectin-like receptor-like kinase 40",6," Reproductive organ - panicle","GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os06g0126250","LOC_Os06g03610.1",{"$nulls":6},"qSH-4-4(t) (qSH4)","qSH-4-4(t) (qSH4)","shattering (QTL)-4-4(t)","shattering (QTL)-4-4(t)",4," Seed - Physiological traits - Shattering",{"$nulls":11},"CIPK20","OsCIPK20, OsSnRK3.15, SnRK3.15","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 20","CBL-interacting protein kinase 20, Sucrose nonfermenting-1-related protein kinase 3.15",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0030145 - manganese ion binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction","TO:0000114 - flooding related trait",null,"Os05g0208100","LOC_Os05g11790.1","Os09g0491772","Os05g0460000","Os10g0371100",0,1.6778313,null,"qYLD-6-1(t) (yld6.1)","qYLD-6-1(t) (yld6.1)","yield per plant (QTL)-6-1(t)","yield per plant (QTL)-6-1(t)",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0192100","LOC_Os05g10370",2.9939125,"Os05g0579500","LOC_Os05g50330",0,2.3744586,{"$nulls":10},"Os09g0481200","Os12g0291400","Os03g0161400","Os03g0161400",3.4722931,3.2118518,null,"Os02g0528500",4.7122116,"Os09g0559600",-1.6462044,{"$nulls":29},"GRY340","OsCMK, CMK, OsIspE, IspE, OsGRY340","GREEN-REVERTIBLE YELLOW LEAF 340","4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, CDP-ME kinase, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, green-revertible yellow leaf 340",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0007005 - mitochondrion organization, GO:0009416 - response to light stimulus, GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity, GO:0009411 - response to UV, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0016114 - terpenoid biosynthetic process, GO:0009570 - chloroplast stroma, GO:0005524 - ATP binding, GO:0009658 - chloroplast organization","TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000496 - carotenoid content, TO:0000160 - UV light sensitivity, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000456 - spikelet number, TO:0000455 - seed set percent, TO:0000075 - light sensitivity, TO:0002715 - chloroplast development trait, TO:0000137 - days to heading, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content, TO:0000326 - leaf color","PO:0000003 - whole plant ","Os01g0802100","LOC_Os01g58790.2, LOC_Os01g58790.1",null,null,"Os06g0275000","Os05g0150500",-1.4351007,0,null,"RLCK203","OsRLCK203, PTK8, OsPTK8","RECEPTOR-LIKE CYTOPLASMIC KINASE 203","Receptor-like Cytoplasmic Kinase 203, Protein Tyrosine Kinase 8",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0030912 - response to deep water, GO:0048316 - seed development, GO:0006970 - response to osmotic stress, GO:0010229 - inflorescence development, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0009408 - response to heat","TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait","PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os06g0202900","LOC_Os06g10160.1",{"$nulls":6},"qSH-7-2(t) (qSD7)","qSH-7-2(t) (qSD7)","shattering (QTL)-7-2(t)","shattering (QTL)-7-2(t)",7," Seed - Physiological traits - Shattering",{"$nulls":11},"CIPK21","OsCIPK21, OsSnRK3.24, SnRK3.24","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 21","CBL-interacting protein kinase 21, Sucrose nonfermenting-1-related protein kinase 3.24",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0009536 - plastid, GO:0007165 - signal transduction, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0006468 - protein amino acid phosphorylation","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os07g0637000","LOC_Os07g44290.1","Os07g0694700","Os04g0402100","Os01g0343300",2.8214571,1.6746718,null,"qYLD-9-1(t) (yld9.1)","qYLD-9-1(t) (yld9.1)","yield per plant (QTL)-9-1(t)","yield per plant (QTL)-9-1(t)",9," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0356300","LOC_Os03g24020",2.9967391,"Os05g0586600","LOC_Os05g50930",0,1.5925454,{"$nulls":10},"Os01g0228600","Os02g0781400","Os01g0896200","Os01g0896200",3.3473082,3.0610015,null,"Os01g0917900",4.7069354,"Os11g0545000",-1.6378018,{"$nulls":29},"EAS1 ","OsPAO, PAO, OsACD1, ACD1, OsEAS1, RCD2, OsRCD2","EARLY SENESCENCE 1 ","Pheophorbide a oxygenase, accelerated cell-death 1, early senescence 1, rapid cell death 2",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0008219 - cell death, GO:0045730 - respiratory burst, GO:0009507 - chloroplast, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009416 - response to light stimulus, GO:0009611 - response to wounding, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046872 - metal ion binding, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000346 - tiller number, TO:0000316 - photosynthetic ability, TO:0000605 - hydrogen peroxide content, TO:0000326 - leaf color, TO:0000075 - light sensitivity, TO:0000325 - soluble protein content, TO:0000495 - chlorophyll content, TO:0000455 - seed set percent, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0001018 - transpiration rate, TO:0000522 - stomatal conductance, TO:0000145 - internode length, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os03g0146400","LOC_Os03g05310.1",null,null,"Os08g0250900","Os05g0155200",-1.4368228,0,null,"RLCK204","OsRLCK204, OsER1, ER1","RECEPTOR-LIKE CYTOPLASMIC KINASE 204","Receptor-like Cytoplasmic Kinase 204, ERECTA 1, ERECTA1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0009690 - cytokinin metabolic process, GO:0048281 - inflorescence morphogenesis, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress","TO:0000621 - inflorescence development trait, TO:0000456 - spikelet number, TO:0000259 - heat tolerance, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000734 - grain length, TO:0000397 - grain size, TO:0006032 - panicle size, TO:0002660 - cytokinin content, TO:0000072 - awn length, TO:0000207 - plant height","PO:0009047 - stem , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0009029 - stamen , PO:0009051 - spikelet , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os06g0203800","LOC_Os06g10230.1",{"$nulls":6},"qSH-8-3(t) (qSH8)","qSH-8-3(t) (qSH8)","shattering (QTL)-8-3(t)","shattering (QTL)-8-3(t)",8," Seed - Physiological traits - Shattering",{"$nulls":11},"CIPK23","OsCIPK23, Os-CIPK23, OsSnRK3.23, SnRK3.23","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 23","CBL-interacting protein kinase 23, CBL-Interacting Protein Kinase23, Sucrose nonfermenting-1-related protein kinase 3.23",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0060359 - response to ammonium ion, GO:0006468 - protein amino acid phosphorylation, GO:0005739 - mitochondrion, GO:0005524 - ATP binding, GO:0007165 - signal transduction, GO:0009414 - response to water deprivation, GO:0030145 - manganese ion binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance, TO:0000514 - potassium uptake",null,"Os07g0150700","LOC_Os07g05620.2, LOC_Os07g05620.1","Os04g0269600","Os03g0852300","Os03g0169800",2.1932287,1.6628205,null,"qYLD-9-2(t) (qYLD9-1)","qYLD-9-2(t) (qYLD9-1)","yield per plant (QTL)-9-2(t)","yield per plant (QTL)-9-2(t)",9," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0725000","LOC_Os06g50930",{"$f":"VLOOKUP(G259,AG:AH, 2,FALSE)","v":3.0041504},"Os06g0107700","LOC_Os06g01850",0,2.1411397,{"$nulls":10},"Os12g0189400","Os08g0116900","Os02g0158100","Os02g0158100",2.85886,2.9534626,null,"Os02g0613900",4.703098,"Os02g0592700",-1.6353971,{"$nulls":29},"RCCR1","OsRCCR1, OsRCCR, RCCR","RED CHLOROPHYLL CATABOLITE REDUCTASE 1","red chlorophyll catabolite reductase 1",10," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0010150 - leaf senescence, GO:0051607 - defense response to virus, GO:0015996 - chlorophyll catabolic process","TO:0000524 - submergence tolerance, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os10g0389200","LOC_Os10g25030.1",null,null,"Os02g0540700","Os06g0703900",-1.4425235,0,null,"RLCK212","OsRLCK212","RECEPTOR-LIKE CYTOPLASMIC KINASE 212","Receptor-like Cytoplasmic Kinase 212",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0663900","LOC_Os06g45350.1, LOC_Os06g45350.2, LOC_Os06g45350.5",{"$nulls":6},"FLO4","FLO4-4, flo4, flo4-2, flo4-3, ppdk, OsPPDK, PPDK1, CPDK1, PPDKB, OsPPDKB, cyOsPPDKB, OsPBDK, PBDK, osppdkb, PPD, cyPPDK","FLOURY ENDOSPERM 4","floury endosperm4, floury endosperm 4, pyruvate orthophospate dikinase, \\Pyruvate, phosphate dikinase 1, chloroplastic\\\", \\\"Pyruvate, orthophosphate dikinase 1\\\", pyruvate orthophosphate dikinase, pyruvate orthophosphate dikinase B, cytosolic pyruvate orthophosphate dikinase, orthophosphate dikinase, Pyruvate phosphate dikinase\"",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0050242 - pyruvate, phosphate dikinase activity, GO:0019252 - starch biosynthetic process, GO:0016772 - transferase activity, transferring phosphorus-containing groups, GO:0016310 - phosphorylation, GO:0000287 - magnesium ion binding, GO:0009651 - response to salt stress, GO:0006529 - asparagine biosynthetic process, GO:0010150 - leaf senescence, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0016740 - transferase activity, GO:0008610 - lipid biosynthetic process, GO:0009416 - response to light stimulus, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016301 - kinase activity","TO:0000249 - leaf senescence, TO:0000104 - floury endosperm, TO:0006001 - salt tolerance, TO:0000075 - light sensitivity","PO:0005360 - aleurone layer , PO:0009005 - root , PO:0009089 - endosperm , PO:0020039 - leaf lamina , PO:0001054 - 4 leaf senescence stage , PO:0020104 - leaf sheath , PO:0020110 - scutellum , PO:0007022 - seed imbibition stage ","Os05g0405000","LOC_Os05g33570.2, LOC_Os05g33570.1",{"$nulls":6},"CIPK24","OsCIPK24, SOS2, OsSOS2, OsSnRK3.22, SnRK3.22","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 24","CBL-interacting protein kinase 24, salt overly sensitive 2, low-cesium rice mutant 1, Sucrose nonfermenting-1-related protein kinase 3.22",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0007165 - signal transduction, GO:0030145 - manganese ion binding, GO:0009705 - plant-type vacuole membrane","TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0000025 - root tip , PO:0009005 - root ","Os06g0606000","LOC_Os06g40370.1","Os03g0195100","Os05g0245700","Os01g0852200",-1.5891167,1.6583257,null,"qYLD-4-1(t) (qYLD4-1)","qYLD-4-1(t) (qYLD4-1)","yield per plant (QTL)-4-1(t)","yield per plant (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0269200","LOC_Os02g16909",3.0136003,"Os06g0109200","LOC_Os06g01966",0,{"$f":"VLOOKUP(K260,H:I, 2,FALSE)","v":3.9187546},{"$nulls":10},"Os05g0555300","Os06g0549300","Os12g0619000","Os12g0619000",2.3381193,1.3225497,null,"Os04g0115800",4.702831,"Os01g0194600",-1.6271919,{"$nulls":29},"RCCR2","OsRCCR2, OsRCCR1, RCCR1","RED CHLOROPHYLL CATABOLITE REDUCTASE 2","red chlorophyll catabolite reductase 2",10," Biochemical character,  Vegetative organ - Leaf","GO:0010150 - leaf senescence","TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os10g0389300","LOC_Os10g25040.1, LOC_Os10g25040.2",null,null,"Os04g0556500","Os06g0270900",-1.4823111,0,null,"RLCK213","OsRLCK213","RECEPTOR-LIKE CYTOPLASMIC KINASE 213","Receptor-like Cytoplasmic Kinase 213",6," Reproductive organ - panicle,  Seed","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0676600","LOC_Os06g46330.1",{"$nulls":6},"ALAAT","alaAT, ALT-1, OsAlaAT1, AlaAT1","ALANINE AMINOTRANSFERASE","alanine aminotransferase, Alanine transaminase 1, alanine-aminotransferase1",10," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004021 - L-alanine:2-oxoglutarate aminotransferase activity, GO:0019481 - L-alanine catabolic process, by transamination, GO:0030170 - pyridoxal phosphate binding, GO:0005829 - cytosol, GO:0010581 - regulation of starch biosynthetic process, GO:0001666 - response to hypoxia, GO:0005507 - copper ion binding, GO:0042594 - response to starvation, GO:0005739 - mitochondrion, GO:0046686 - response to cadmium ion, GO:0008483 - transaminase activity, GO:0009058 - biosynthetic process, GO:0009507 - chloroplast","TO:0000196 - amylose content, TO:0000696 - starch content, TO:0000011 - nitrogen sensitivity, TO:0000104 - floury endosperm","PO:0004506 - developing seed stage ","Os10g0390500","LOC_Os10g25130.1",{"$nulls":6},"CIPK25","OsCIPK25, OsSnRK3.21, SnRK3.21","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 25","CBL-interacting protein kinase 25, Sucrose nonfermenting-1-related protein kinase 3.21",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os06g0543400","LOC_Os06g35160.1","Os04g0652400","Os08g0562200","Os05g0389600",0,1.657834,null,"qYLD-10-1(t) (qYLD10-1)","qYLD-10-1(t) (qYLD10-1)","yield per plant (QTL)-10-1(t)","yield per plant (QTL)-10-1(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0634900","LOC_Os07g44090",3.0182467,"Os06g0159900","LOC_Os06g06490",0,-1.2050422,{"$nulls":10},"Os03g0778100","Os01g0869800","Os04g0569900","Os04g0569900",2.282586,2.0508223,null,"Os12g0571700",4.694078,"Os04g0684800",-1.6265568,{"$nulls":29},"_","CP, OsSAG12-2, SAG12-2","_","Cys protease, cysteine protease, senescence-associated gene 12-2",8," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010150 - leaf senescence, GO:0006508 - proteolysis, GO:0009411 - response to UV, GO:0008219 - cell death, GO:0008234 - cysteine-type peptidase activity","TO:0006001 - salt tolerance, TO:0000160 - UV light sensitivity, TO:0000249 - leaf senescence",null,"Os08g0556900","LOC_Os08g44270.1",null,null,"Os11g0490900","Os08g0120000",-1.5058984,0,null,"RLCK215","OsRLCK215","RECEPTOR-LIKE CYTOPLASMIC KINASE 215","Receptor-like Cytoplasmic Kinase 215",6," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development","TO:0000074 - blast disease, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os06g0690200","LOC_Os06g47530.1",{"$nulls":6},"BRD2","brd2, OsBRD2, Dim/dwf1, Dim, dwf1, OsDWF1, DWF1, LTBSG1, OsLTBSG1, LHDD10, OsLHDD10, OsD-LDH3, D-LDH3","BRASSINOSTEROID DEFICIENT DWARF 2","brassinosteroid (BR)-deficient dwarf-2, BR-deficient dwarf2, brassinosteroid-deficient dwarf2, rice homolog of Arabidopsis thaliana DIMINUTO/DWARF1, Dim/dwf1 protein, DIMINUTO, DWARF1, Putative Cell elongation protein DIMINUTO, Cell elongation protein Dwarf1, Dimunito/Dwarf1, longer top branch and shorter grain 1, D-lactate dehydrogenase 3",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010154 - fruit development, GO:0005783 - endoplasmic reticulum, GO:0009834 - secondary cell wall biogenesis, GO:0048767 - root hair elongation, GO:0010075 - regulation of meristem growth, GO:0000272 - polysaccharide catabolic process, GO:0000271 - polysaccharide biosynthetic process, GO:0009664 - plant-type cell wall organization, GO:0005634 - nucleus, GO:0009932 - cell tip growth, GO:0010229 - inflorescence development, GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development, GO:0005982 - starch metabolic process, GO:0016126 - sterol biosynthetic process, GO:0009507 - chloroplast, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0048587 - regulation of short-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0016132 - brassinosteroid biosynthetic process, GO:0043481 - anthocyanin accumulation in tissues in response to UV light, GO:0048653 - anther development, GO:0050614 - delta24-sterol reductase activity, GO:0050660 - FAD binding, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0006084 - acetyl-CoA metabolic process, GO:0009808 - lignin metabolic process, GO:0009825 - multidimensional cell growth, GO:0019344 - cysteine biosynthetic process","TO:0000734 - grain length, TO:0002688 - leaf lamina joint bending, TO:0000326 - leaf color, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000397 - grain size, TO:0000621 - inflorescence development trait, TO:0000495 - chlorophyll content, TO:0000382 - 1000-seed weight, TO:0000357 - growth and development trait, TO:0000207 - plant height","PO:0001083 - inflorescence development stage , PO:0001002 - fruit development stage , PO:0000037 - shoot apex ","Os10g0397400","LOC_Os10g25780.3, LOC_Os10g25780.2, LOC_Os10g25780.1",{"$nulls":6},"CIPK26","OsCIPK26, OsSnRK3.8, SnRK3.8","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 26","CBL-interacting protein kinase 26, Sucrose nonfermenting-1-related protein kinase 3.8",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006468 - protein amino acid phosphorylation, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0030145 - manganese ion binding, GO:0005524 - ATP binding, GO:0007165 - signal transduction","TO:0000303 - cold tolerance",null,"Os02g0161000","LOC_Os02g06570.1, LOC_Os02g06570.2","Os02g0658100","Os01g0246700","Os02g0573200",-1.1510574,1.6562303,null,"qBMS-1-1(t) (qBMS1-1)","qBMS-1-1(t) (qBMS1-1)","biomass per plant (QTL)-1-1(t)","biomass per plant (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0623300","LOC_Os02g41450",3.0280483,"Os06g0196300","LOC_Os06g09610",0,3.1995986,{"$nulls":10},"Os02g0698000","Os05g0135500","Os03g0807400","Os03g0807400",1.3167697,1.2865318,null,"Os07g0691600",4.6874776,"Os03g0570800",-1.6251078,{"$nulls":29},"_","OsSAG12, SAG12","_","senescence-associated gene 12",4," Biochemical character,  Vegetative organ - Leaf","GO:0008234 - cysteine-type peptidase activity, GO:0010150 - leaf senescence, GO:0006508 - proteolysis","TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os04g0208200","LOC_Os04g13140.1",null,null,"Os03g0266200","Os06g0658900",-1.5231868,0,null,"RLCK216","OsRLCK216, OsRRK1, RRK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 216","Receptor-like Cytoplasmic Kinase 216, Rop-interacting receptor-like kinase 1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0002213 - defense response to insect","TO:0000180 - spikelet fertility, TO:0006001 - salt tolerance, TO:0000424 - brown planthopper resistance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os06g0693200","LOC_Os06g47820.1",{"$nulls":6},"DBS1","dbs1","DWARFBAMBOO SHOOT 1","dwarf bamboo shoot 1",1," Seed - Morphological traits - Embryo","GO:0009790 - embryonic development, GO:0009653 - anatomical structure morphogenesis",{"$nulls":10},"CIPK29","OsCIPK29, OsSnRK3.25, SnRK3.25","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 29","CBL-interacting protein kinase 29, Sucrose nonfermenting-1-related protein kinase 3.25",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0030145 - manganese ion binding, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0007165 - signal transduction, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os07g0678300","LOC_Os07g48090.1","Os10g0515200","Os10g0567000","Os06g0681600",2.2868707,1.6549255,null,"qBMS-1-2(t) (qBMS1-2)","qBMS-1-2(t) (qBMS1-2)","biomass per plant (QTL)-1-2(t)","biomass per plant (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0875000","LOC_Os01g65420",3.0359428,"Os06g0264800","LOC_Os06g15400",0,4.016331,{"$nulls":10},"Os08g0347500","Os09g0531900","Os08g0115200","Os08g0115200",1.2290587,1.5523863,null,"Os11g0308800",4.68484,"Os10g0130600",-1.62406,{"$nulls":29},"NAC58","OsNAP, NAP, ONAC058, ONAC58, Os PS1, PS1, OsCTb1, CTb1","NAC DOMAIN-CONTAINING PROTEIN 58","NAC Family Transcription Factor OsNAP, NAC domain-containing protein 058, NAC domain-containing protein 58, prematurely senile 1",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0015996 - chlorophyll catabolic process, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0009738 - abscisic acid mediated signaling, GO:0003677 - DNA binding","TO:0000168 - abiotic stress trait, TO:0002667 - abscisic acid content, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0002668 - jasmonic acid content, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os03g0327800","LOC_Os03g21060.1",null,null,"Os01g0547600","Os12g0507200",-1.5388855,0,null,"RLCK218","OsRLCK218","RECEPTOR-LIKE CYTOPLASMIC KINASE 218","Receptor-like Cytoplasmic Kinase 218",6," Reproductive organ - panicle,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os06g0714900","LOC_Os06g50100.1",{"$nulls":6},"ENL","enl","ENDOSPERMLESS","endospermless",null," Seed - Morphological traits - Endosperm","GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development",{"$nulls":10},"CIPK30","OsCIPK30, OsSnRK3.5, SnRK3.5","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 30","CBL-interacting protein kinase 30, Sucrose nonfermenting-1-related protein kinase 3.5",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0030145 - manganese ion binding, GO:0007165 - signal transduction, GO:0006468 - protein amino acid phosphorylation, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000114 - flooding related trait",null,"Os01g0759200","LOC_Os01g55440.1","Os04g0600200","Os06g0354700","Os10g0554200",0,1.6377968,null,"qBMS-3-1(t) (qBMS3-1)","qBMS-3-1(t) (qBMS3-1)","biomass per plant (QTL)-3-1(t)","biomass per plant (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0359600","LOC_Os03g24510",3.041989,"Os06g0289900","LOC_Os06g18670",0,7.8760147,{"$nulls":10},"Os03g0786100","Os02g0192700","Os08g0300200","Os08g0300200",1.1450081,1.4960216,null,"Os01g0880800",4.683676,"Os04g0394766",-1.6235386,{"$nulls":29},"PUP1","OsPUP1","PURINE PERMEASE 1","purine permease 1, PUP-type cytokinin transporter 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0010184 - cytokinin transport, GO:0015211 - purine nucleoside transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum","TO:0000040 - panicle length, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000346 - tiller number, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002689 - leaf sheath length, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000590 - grain weight","PO:0001083 - inflorescence development stage , PO:0005417 - phloem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0000034 - vascular system , PO:0009005 - root ","Os03g0187800","LOC_Os03g08880.1",null,null,"Os07g0209000","Os02g0817700",-1.5615784,0,null,"RLCK220","OsRLCK220","RECEPTOR-LIKE CYTOPLASMIC KINASE 220","Receptor-like Cytoplasmic Kinase 220",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0727400","LOC_Os06g51170.1",{"$nulls":6},"GLUB1","GluB1, GluB1-A, GluB-1, OsGluB1, GluB-1b, OsGluB-1b, GLUB1B","GLUTELIN B1","Glutelin type-B 1, Glutelin type-B 1 acidic chain, Glutelin type-B 1 basic chain",2," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",null,"PO:0006220 - central endosperm ","Os02g0249900","LOC_Os02g15169.1",{"$nulls":6},"DMI3","OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK","DOESN'T MAKE INFECTIONS 3","DOESN'T MAKE INFECTIONS3, calcium and calmodulin-dependent protein kinase 1, Ca2+/calmodulin (CaM)-dependent protein kinase, CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0019722 - calcium-mediated signaling, GO:0004683 - calmodulin-dependent protein kinase activity, GO:0010726 - positive regulation of hydrogen peroxide metabolic process, GO:0016021 - integral to membrane, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0048364 - root development, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0009845 - seed germination, GO:0006979 - response to oxidative stress, GO:0042542 - response to hydrogen peroxide, GO:0009738 - abscisic acid mediated signaling, GO:0043408 - regulation of MAPKKK cascade","TO:0002657 - oxidative stress, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000656 - root development trait, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0007057 - 0 seed germination stage ","Os05g0489900","LOC_Os05g41090.1","Os01g0930400","Os07g0633200","Os03g0235700",1.3965803,1.6259762,null,"qBMS-4-1(t) (qBMS4-1)","qBMS-4-1(t) (qBMS4-1)","biomass per plant (QTL)-4-1(t)","biomass per plant (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0571800","LOC_Os06g37450",3.0469806,"Os06g0294600","LOC_Os06g19070",0,2.8447745,{"$nulls":10},"Os12g0420400","Os02g0817900","Os03g0130500","Os03g0130500",-1.1229655,-1.0064472,null,"Os03g0192100",4.677479,"Os01g0113900",-1.6231936,{"$nulls":29},"PUP4","OsPUP4, BG3/OsPUP4, BG3, OsBG3","PURINE PERMEASE 4","purine permease 4, PUP-type cytokinin transporter 4, Big Grain3",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0009690 - cytokinin metabolic process, GO:0010184 - cytokinin transport, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0048366 - leaf development, GO:0009737 - response to abscisic acid stimulus","TO:0000567 - tiller angle, TO:0000137 - days to heading, TO:0002759 - grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000655 - leaf development trait, TO:0000397 - grain size, TO:0000557 - secondary branch number, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0002689 - leaf sheath length, TO:0000734 - grain length, TO:0000399 - grain thickness, TO:0000615 - abscisic acid sensitivity","PO:0009015 - portion of vascular tissue ","Os01g0680200","LOC_Os01g48800.1",null,null,"Os01g0883800","Os02g0745100",-1.5785723,0,null,"RLCK222","OsRLCK222","RECEPTOR-LIKE CYTOPLASMIC KINASE 222","Receptor-like Cytoplasmic Kinase 222",7," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0016021 - integral to membrane, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os07g0134200","LOC_Os07g04190.1",{"$nulls":6},"GRX","grx, OsGRX, OsGRX14, OsGrx9, OsGrxC2;2, GrxC2;2, OsGrxC2.2, GrxC2.2","GLUTAREDOXIN","glutaredoxin, glutaredoxin 14, CPYC-type Glutaredoxin 2.2",4," Biochemical character,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Stress tolerance","GO:0022900 - electron transport chain, GO:0045454 - cell redox homeostasis, GO:0016209 - antioxidant activity, GO:0006810 - transport, GO:0005737 - cytoplasm, GO:0008794 - arsenate reductase (glutaredoxin) activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0045995 - regulation of embryonic development, GO:0009055 - electron carrier activity, GO:0006979 - response to oxidative stress","TO:0000189 - embryoless, TO:0002657 - oxidative stress, TO:0000181 - seed weight, TO:0000064 - embryo related trait, TO:0000605 - hydrogen peroxide content","PO:0004506 - developing seed stage , PO:0009009 - plant embryo , PO:0005360 - aleurone layer , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0009010 - seed , PO:0020033 - coleoptile ","Os04g0508300","LOC_Os04g42930.2, LOC_Os04g42930.1",{"$nulls":6},"HKT7","OsHKT7, OsHKT1;4, HKT1;4","HIGH-AFFINITY K+ TRANSPORTER 7","Oryza sativa High-affinity K+ Transporter 7, Probable cation transporter HKT7",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015079 - potassium ion transmembrane transporter activity, GO:0030955 - potassium ion binding, GO:0034059 - response to anoxia, GO:0009651 - response to salt stress, GO:0006813 - potassium ion transport, GO:0006814 - sodium ion transport, GO:0055085 - transmembrane transport, GO:0031402 - sodium ion binding, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane","TO:0006001 - salt tolerance","PO:0009006 - shoot system , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0009047 - stem ","Os04g0607600","LOC_Os04g51830.1","Os03g0183200","Os01g0695800","Os03g0841800",0,1.6212746,null,"qBMS-7-1(t) (qBMS7-1)","qBMS-7-1(t) (qBMS7-1)","biomass per plant (QTL)-7-1(t)","biomass per plant (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0747400","LOC_Os02g51280",3.0791883,"Os06g0318600","LOC_Os06g21380",0,-1.1053046,{"$nulls":10},"Os06g0320500","Os01g0294700","Os01g0329800","Os01g0329800",-1.348208,-0.9762449,null,"Os02g0197600",4.6723037,"Os02g0540700",-1.6222826,{"$nulls":29},"PUP7","OsPUP7","PURINE PERMEASE 7","purine permease 7, PUP-type cytokinin transporter 7",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0010184 - cytokinin transport, GO:0005783 - endoplasmic reticulum, GO:0051302 - regulation of cell division","TO:0006001 - salt tolerance, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000567 - tiller angle, TO:0000397 - grain size","PO:0009015 - portion of vascular tissue ","Os05g0556800","LOC_Os05g48300.1",null,null,"Os03g0146400","Os04g0614600",-1.585734,0,null,"RLCK240","OsRLCK240","RECEPTOR-LIKE CYTOPLASMIC KINASE 240","Receptor-like Cytoplasmic Kinase 240",7," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os07g0668900","LOC_Os07g47270.1",{"$nulls":6},"LPA1","Lpa1, OsLpa1, OsLpa1.1, OsLpa1.2, OsLpa1.3, Oslpa1, OsLpa1-3.1, OsLpa1-3.2, OsLpa1-3.3","LOW PHYTIC ACID 1","Low phytic acid-1, low phytic acid 1, low PA  1",2," Seed - Physiological traits - Storage substances","GO:0009845 - seed germination, GO:0009737 - response to abscisic acid stimulus, GO:0009507 - chloroplast, GO:0032958 - inositol phosphate biosynthetic process, GO:0006793 - phosphorus metabolic process, GO:0043647 - inositol phosphate metabolic process","TO:0002666 - seed phosphorus content, TO:0000615 - abscisic acid sensitivity","PO:0009010 - seed , PO:0005360 - aleurone layer , PO:0009047 - stem , PO:0025034 - leaf , PO:0009005 - root , PO:0009067 - filament , PO:0007057 - 0 seed germination stage ","Os02g0819400","LOC_Os02g57400.3, LOC_Os02g57400.2, LOC_Os02g57400.1",{"$nulls":6},"HMA9","OsHMA9, oshma9-1, oshma9-2, HMA9, OsHMP33, HMP33","HEAVY METAL ATPASE 9","Oryza sativa heavy metal ATPase 9, HEAVY METAL ATPASE 9, heavy metal P-Type ATPase 9, Heavy metal-associated protein 33",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0043682 - copper-transporting ATPase activity, GO:0016021 - integral to membrane, GO:0010119 - regulation of stomatal movement, GO:0010288 - response to lead ion, GO:0005794 - Golgi apparatus, GO:0009873 - ethylene mediated signaling pathway, GO:0046688 - response to copper ion, GO:0016020 - membrane, GO:0046873 - metal ion transmembrane transporter activity","TO:0000351 - zinc sensitivity, TO:0000021 - copper sensitivity",null,"Os06g0665800","LOC_Os06g45500.1","Os01g0919800","Os03g0643300","Os05g0211100",0,1.6188742,null,"qBMS-7-2(t) (qBMS7-2)","qBMS-7-2(t) (qBMS7-2)","biomass per plant (QTL)-7-2(t)","biomass per plant (QTL)-7-2(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0792000","LOC_Os02g54920",3.080574,"Os06g0320500","LOC_Os06g21590",0,2.7043002,{"$nulls":10},"Os03g0343900","Os12g0292400","Os03g0158500","Os03g0158500",-1.3515953,-1.2037576,null,"Os01g0744200",4.6721015,"Os08g0202300",-1.620855,{"$nulls":29},"CEF1","OsMYB103, OsMYB103L, CEF1/OsMYB103L, MYB103, MYB103L, OsMYB93, MYB93","CULM EASILY FRAGILE 1","myb transcription factor 103, transcription factor MYB103, Oryza sativa MYB103 Like, culm easily fragile 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Other","GO:0030244 - cellulose biosynthetic process, GO:0009740 - gibberellic acid mediated signaling, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0003677 - DNA binding, GO:0009834 - secondary cell wall biogenesis","TO:0000200 - brittle culm, TO:0000085 - leaf rolling, TO:0000166 - gibberellic acid sensitivity",null,"Os08g0151300","LOC_Os08g05520.1",null,null,"Os10g0573900","Os02g0570400",-1.6144248,0,null,"RLCK241","OsRLCK241, PTK11, OsPTK11","RECEPTOR-LIKE CYTOPLASMIC KINASE 241","Receptor-like Cytoplasmic Kinase 241, Protein Tyrosine Kinase 11",7," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0009408 - response to heat, GO:0004672 - protein kinase activity","TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity, TO:0000621 - inflorescence development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os07g0686800","LOC_Os07g48730.1",{"$nulls":6},"LSI1","lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1, lsi(t), OsNIP2.1/OsLsi1/OsSIIT1, OsNIP2.1, NIP2.1","LOW SILICON RICE 1","low silicon rice, Low silicon rice 1, Silicon transporter LSI1, Aquaporin NIP2-1, NOD26-like intrinsic protein 2-1, Silicon transporter LSI1, Low silicon protein 1, NOD26 LIKE INTRINSIC PROTEIN 2;1, low Si uptake, Low Si 1",2," Vegetative organ - Root,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0055085 - transmembrane transport, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0009733 - response to auxin stimulus, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0015115 - silicate transmembrane transporter activity, GO:0009651 - response to salt stress, GO:0048830 - adventitious root development, GO:0015104 - antimonite transmembrane transporter activity, GO:0015708 - silicate transport, GO:0048226 - Casparian strip, GO:0016021 - integral to membrane, GO:0009409 - response to cold, GO:0010035 - response to inorganic substance, GO:0005215 - transporter activity, GO:0042594 - response to starvation, GO:0016020 - membrane","TO:0000396 - grain yield, TO:0000021 - copper sensitivity, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000031 - silicon sensitivity, TO:0000261 - insect damage resistance, TO:0000007 - sulfur sensitivity, TO:0000201 - panicle color","PO:0009005 - root , PO:0005059 - root endodermis , PO:0005772 - exodermis , PO:0020121 - lateral root , PO:0020127 - primary root ","Os02g0745100","LOC_Os02g51110.1",{"$nulls":6},"HPL3","OsHPL3, CYP74B2, OsCYP74B2","HYDROPEROXIDE LYASE 3",null,2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0009941 - chloroplast envelope, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0010597 - green leaf volatile biosynthetic process, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016829 - lyase activity, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009055 - electron carrier activity","TO:0000148 - viral disease resistance, TO:0000396 - grain yield",null,"Os02g0110200","LOC_Os02g02000.1","Os01g0224700","Os09g0491772","Os09g0487600",0,1.6109462,null,"qHID-1-1(t) (qHID1-1)","qHID-1-1(t) (qHID1-1)","harvest index (QTL)-1-1(t)","harvest index (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0828100","LOC_Os03g61260",3.0872662,"Os06g0474800","LOC_Os06g28050",0,-1.9624877,{"$nulls":10},"Os01g0279100","Os08g0531000","Os01g0279300","Os01g0279300",-1.4656292,-1.3882551,null,"Os07g0636800",4.6675253,"Os02g0733500",-1.6196266,{"$nulls":29},"DNRL1","OsDAHP1, DAHP1, DAHPS, OsDAHPS2, DAHPS2, OsDNRL1","DYNAMIC NARROW-ROLLED LEAF 1","phospho-2-dehydro-3-deoxyheptonate aldolase, 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2, Dynamic Narrow-Rolled Leaf 1, 3-deoxy-7-phosphoheptulonate synthase 1, Phospho-2-dehydro-3-deoxyheptonate aldolase 2",7," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0009423 - chorismate biosynthetic process, GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity, GO:0009073 - aromatic amino acid family biosynthetic process, GO:0045764 - positive regulation of cellular amino acid metabolic process, GO:0009965 - leaf morphogenesis, GO:0009507 - chloroplast","TO:0002673 - amino acid content, TO:0000160 - UV light sensitivity, TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0002674 - tryptophan content","PO:0009005 - root , PO:0009006 - shoot system , PO:0001050 - leaf development stage ","Os07g0622200","LOC_Os07g42960.2, LOC_Os07g42960.1",null,null,"Os06g0354700","Os02g0274100",-1.6256365,0,null,"RLCK242","OsRLCK242","RECEPTOR-LIKE CYTOPLASMIC KINASE 242","Receptor-like Cytoplasmic Kinase 242",7," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0016021 - integral to membrane, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os07g0693000","LOC_Os07g49240.1",{"$nulls":6},"AGAP","OsAGAP","ARF-GTPASE-ACTIVATING PROTEIN","ARF-GTPase-activating protein, adenosine diphosphate ribosylation factor-GTPase-activating protein",2," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005543 - phospholipid binding, GO:0005096 - GTPase activator activity, GO:0008060 - ARF GTPase activator activity, GO:0005634 - nucleus, GO:0005737 - cytoplasm","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0009066 - anther , PO:0009039 - glume , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0009047 - stem , PO:0009005 - root ","Os02g0198300","LOC_Os02g10480.6, LOC_Os02g10480.5, LOC_Os02g10480.4, LOC_Os02g10480.3, LOC_Os02g10480.2, LOC_Os02g10480.1",{"$nulls":6},"MADS51","OsMADS51, OsMADS65, MADS65, qHd1, DLN36, OsDLN36","MADS BOX GENE 51","MADS box gene51, DLN repressor 36, DLN motif protein 36",1," Reproductive organ - Heading date,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0006350 - transcription, GO:0003700 - transcription factor activity","TO:0002616 - flowering time, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000303 - cold tolerance, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0000432 - temperature response trait",null,"Os01g0922800","LOC_Os01g69850.1","Os03g0188100","Os07g0694700","Os06g0531200",2.3217194,1.5896063,null,"qHID-1-2(t) (qHID1-2)","qHID-1-2(t) (qHID1-2)","harvest index (QTL)-1-2(t)","harvest index (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0572000","LOC_Os12g38400",3.1233323,"Os06g0483200","LOC_Os06g28820",0,4.0655737,{"$nulls":10},"Os01g0600900","Os03g0749300","Os02g0247800","Os02g0247800",-1.5008136,-1.1376272,null,"Os03g0432100",4.6538124,"Os01g0961300",-1.6182219,{"$nulls":29},"BHLH7","OsbHLH007, bHLH007","BASIC HELIX-LOOP-HELIX PROTEIN 7","basic helix-loop-helix protein 007",4," Vegetative organ - Leaf,  Coloration - Anthocyanin","GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0005634 - nucleus","TO:0000326 - leaf color",null,"Os04g0300600","LOC_Os04g23440.1",null,null,"Os10g0580400","Os08g0174700",-1.6404195,0,null,"RLCK249","OsRLCK249, OsUSP32, USP32","RECEPTOR-LIKE CYTOPLASMIC KINASE 249","Receptor-like Cytoplasmic Kinase 249, universal stress protein 32",8," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0009751 - response to salicylic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0006950 - response to stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0002238 - response to molecule of fungal origin, GO:0009408 - response to heat","TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os08g0249100","LOC_Os08g15060.1",{"$nulls":6},"CUC3","OsCUC3, ONAC107, NAC107, DLN214, OsDLN214","CUP-SHAPED COTYLEDON 3","cup-shaped cotyledon 3, NAC domain-containing protein 107, CUP-SHAPED COTYLEDON3, DLN repressor 214, DLN motif protein 214",8," Vegetative organ - Leaf,  Seed - Morphological traits - Embryo,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045449 - regulation of transcription, GO:0009790 - embryonic development, GO:0048508 - embryonic meristem development, GO:0003677 - DNA binding, GO:0048366 - leaf development, GO:0009791 - post-embryonic development, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0010492 - maintenance of shoot apical meristem identity","TO:0006020 - shoot apical meristem development, TO:0000225 - stamen number, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0020103 - flag leaf , PO:0009055 - bract , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0009005 - root , PO:0025034 - leaf , PO:0020148 - shoot apical meristem , PO:0009009 - plant embryo ","Os08g0511200","LOC_Os08g40030.1",{"$nulls":6},"MIR156B","miR156b, OsmiR156b, osmiR156b, osa-miR156b, osa-MIR156b, miR156b*osa-miR156b-3p osa-miR156b-5p","MICRORNA156B","micro RNA 156b, microRNA156b, osa-miRNA156b",1," Tolerance and resistance - Disease resistance,  Character as QTL - Plant growth activity,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0010050 - vegetative phase change, GO:0032350 - regulation of hormone metabolic process","TO:0000476 - growth hormone content, TO:0000074 - blast disease, TO:0000357 - growth and development trait","PO:0000009 - cultured plant callus , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009049 - inflorescence ",null,null,"Os01g0597800","Os04g0269600","Os08g0425200",0,1.5866632,null,"qHID-3-1(t) (qHID3-1)","qHID-3-1(t) (qHID3-1)","harvest index (QTL)-3-1(t)","harvest index (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0191500","LOC_Os05g10310",3.1318233,"Os06g0502900","LOC_Os06g30710",0,-1.046475,{"$nulls":10},"Os01g0720500","Os02g0608600","Os01g0955500","Os01g0955500",-1.5536238,-1.8308636,null,"Os12g0501900",4.635998,"Os04g0639200",-1.617464,{"$nulls":29},"BHLH9","OsbHLH009, bHLH009, OsMYC2, MYC2","BASIC HELIX-LOOP-HELIX PROTEIN 9","basic helix-loop-helix protein 009, Myelocytomatosis oncogene transcription factor 2",10," Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010200 - response to chitin, GO:0031348 - negative regulation of defense response, GO:0010100 - negative regulation of photomorphogenesis, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding, GO:0009742 - brassinosteroid mediated signaling, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009269 - response to desiccation, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0003677 - DNA binding, GO:0046983 - protein dimerization activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0051607 - defense response to virus, GO:0010150 - leaf senescence, GO:0051090 - regulation of transcription factor activity, GO:0009646 - response to absence of light, GO:0010229 - inflorescence development, GO:0043619 - regulation of transcription from RNA polymerase II promoter in response to oxidative stress, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009689 - induction of phytoalexin biosynthetic process, GO:0002213 - defense response to insect","TO:0000261 - insect damage resistance, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000175 - bacterial blight disease resistance, TO:0000112 - disease resistance, TO:0000621 - inflorescence development trait, TO:0000495 - chlorophyll content, TO:0000657 - spikelet anatomy and morphology trait, TO:0000172 - jasmonic acid sensitivity, TO:0000075 - light sensitivity, TO:0000276 - drought tolerance, TO:0000148 - viral disease resistance, TO:0000249 - leaf senescence, TO:0002677 - brassinosteroid sensitivity, TO:0000020 - black streak dwarf virus resistance","PO:0001054 - 4 leaf senescence stage , PO:0001083 - inflorescence development stage , PO:0009047 - stem ","Os10g0575000","LOC_Os10g42430.1",null,null,"Os01g0866400","Os02g0140300",-1.6587092,0,null,"RLCK257","OsRLCK257","RECEPTOR-LIKE CYTOPLASMIC KINASE 257","Receptor-like Cytoplasmic Kinase 257",8," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0016021 - integral to membrane","TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os08g0506400","LOC_Os08g39590.1",{"$nulls":6},"EIL1","OsEIL1, EIN3, OsEIN3, MHZ6, OsEIL1a, EIL1a","ETHYLENE INSENSITIVE-LIKE GENE 1","EIN3-like protein 1, ethylene-insensitive 3, ETHYLENE INSENSITIVE3-LIKE 1, EIN3-LIKE 1, EIN3-like 1",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0010150 - leaf senescence, GO:0003677 - DNA binding, GO:0042742 - defense response to bacterium, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009873 - ethylene mediated signaling pathway, GO:0003700 - transcription factor activity, GO:0010601 - positive regulation of auxin biosynthetic process, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus","TO:0000043 - root anatomy and morphology trait, TO:0000173 - ethylene sensitivity, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000620 - embryo development trait, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0001031 - 4 root elongation stage ","Os03g0324200","LOC_Os03g20780.1",{"$nulls":6},"SDT","miR156h, OsmiR156h, osmiR156h, osa-miR156h, osa-MIR156hosa-miR156h-3p osa-miR156h-5p","SEMIDWARF AND HIGH-TILLERING","micro RNA 156h, microRNA156h, osa-miRNA156h, semidwarf and high-tillering",6," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000068 - lodging incidence, TO:0000207 - plant height","PO:0000009 - cultured plant callus , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009049 - inflorescence ",null,null,"Os01g0952800","Os03g0195100","Os06g0146100",0,1.5859522,null,"qHID-3-2(t) (qHID3-2)","qHID-3-2(t) (qHID3-2)","harvest index (QTL)-3-2(t)","harvest index (QTL)-3-2(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0375400","LOC_Os05g31140",3.1620057,"Os06g0573600","LOC_Os06g37560",0,3.277757,{"$nulls":10},"Os01g0805300","Os02g0280700","Os03g0748000","Os03g0748000",-1.6022412,-1.1706415,null,"Os02g0802500",4.632011,"Os01g0551100",-1.6171036,{"$nulls":29},"DPF","OsbHLH025, bHLH025, bHLH25","DITERPENIOD PHYTOALEXIN FACTOR","basic helix-loop-helix protein 025",1," Vegetative organ - Leaf,  Coloration - Anthocyanin,  Other","GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0031540 - regulation of anthocyanin biosynthetic process","TO:0000326 - leaf color, TO:0000074 - blast disease",null,"Os01g0196300","LOC_Os01g09990.2, LOC_Os01g09990.1",null,null,"Os03g0764900","Os01g0889400",-1.6627002,0,null,"RLCK272","OsRLCK272, PTK14, OsPTK14","RECEPTOR-LIKE CYTOPLASMIC KINASE 272","Receptor-like Cytoplasmic Kinase 272, Protein Tyrosine Kinase 14",9," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009408 - response to heat, GO:0006970 - response to osmotic stress, GO:0030912 - response to deep water, GO:0009737 - response to abscisic acid stimulus","TO:0000095 - osmotic response sensitivity, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0007616 - flowering stage , PO:0009030 - carpel , PO:0009066 - anther , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0442100","LOC_Os09g27010.1",{"$nulls":6},"EXPB3","OsEXPB3, osaEXPb1.10, EXPb1.10","BETA-EXPANSIN 3","Expansin-B3, Beta-expansin-3",10," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy","GO:0019953 - sexual reproduction, GO:0007047 - cell wall organization, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005576 - extracellular region, GO:0019898 - extrinsic to membrane, GO:0005618 - cell wall","TO:0000207 - plant height",null,"Os10g0555900","LOC_Os10g40720.1",{"$nulls":6},"SOS1","OsSOS1, OsNHA1, NHA1","SALT OVERLY SENSITIVE 1","Oryza sativa salt overly sensitive 1, Na+/H+ antiporter 1",12," Tolerance and resistance - Stress tolerance","GO:0010352 - lithium ion export, GO:0055085 - transmembrane transport, GO:0009414 - response to water deprivation, GO:0055075 - potassium ion homeostasis, GO:0055078 - sodium ion homeostasis, GO:0015385 - sodium:hydrogen antiporter activity, GO:0042542 - response to hydrogen peroxide, GO:0016021 - integral to membrane, GO:0006814 - sodium ion transport, GO:0010163 - high-affinity potassium ion import, GO:0009941 - chloroplast envelope, GO:0009651 - response to salt stress, GO:0010348 - lithium:hydrogen antiporter activity, GO:0005886 - plasma membrane","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0000025 - root tip ","Os12g0641100","LOC_Os12g44360.1, LOC_Os12g44360.2, LOC_Os12g44360.4, LOC_Os12g44360.3","Os10g0491000","Os04g0652400","Os03g0273800",1.2573267,1.5858539,null,"qHID-4-1(t) (qHID4-1)","qHID-4-1(t) (qHID4-1)","harvest index (QTL)-4-1(t)","harvest index (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0537700","LOC_Os09g36680",3.1804707,"Os06g0661800","LOC_Os06g45100",0,1.7923781,{"$nulls":10},"Os01g0869800","Os09g0459900","Os01g0955100","Os01g0955100",-1.683084,-1.1783794,null,"Os05g0361700",4.630455,"Os07g0570100",-1.616642,{"$nulls":29},"BHLH51","OsbHLH051, bHLH051, bHLH51, OsFAMA, FAMA","BASIC HELIX-LOOP-HELIX PROTEIN 51","basic helix-loop-helix protein 051",5," Vegetative organ - Leaf","GO:0010052 - guard cell differentiation, GO:0051782 - negative regulation of cell division, GO:0010374 - stomatal complex development, GO:0010442 - guard cell morphogenesis, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010443 - meristemoid mother cell division, GO:0016597 - amino acid binding, GO:0045597 - positive regulation of cell differentiation, GO:0008152 - metabolic process",null,null,"Os05g0586300","LOC_Os05g50900.1",null,null,"Os01g0930400","Os03g0737200",-1.6777977,0,null,"RLCK282","OsRLCK282","RECEPTOR-LIKE CYTOPLASMIC KINASE 282","Receptor-like Cytoplasmic Kinase 282",9," Reproductive organ - panicle,  Seed,  Tolerance and resistance","GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0009611 - response to wounding, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0570100","LOC_Os09g39650.1, LOC_Os09g39650.2, LOC_Os09g39650.3",{"$nulls":6},"SGD2","HOX3, Oshox3, OsHox3","SMALL GRAIN AND DWARF 2","rice homeobox gene 3, Homeobox-leucine zipper protein HOX3, Homeodomain transcription factor HOX3, HD-ZIP protein HOX3, Small Grain and Dwarf 2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0030371 - translation repressor activity, GO:0016049 - cell growth, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0002675 - gibberellic acid content, TO:0002689 - leaf sheath length, TO:0000207 - plant height, TO:0000241 - leaf number, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000346 - tiller number, TO:0006020 - shoot apical meristem development, TO:0000734 - grain length","PO:0009005 - root , PO:0020141 - stem node , PO:0025395 - floral organ ","Os01g0643600","LOC_Os01g45570.1",{"$nulls":6},"YUCCA1","OsYUCCA1, OsYUC1, YUC1","YUCCA-LIKE GENE 1","(YUCCA-like gene)",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0046685 - response to arsenic, GO:0051607 - defense response to virus, GO:0009851 - auxin biosynthetic process, GO:0009414 - response to water deprivation, GO:0004499 - flavin-containing monooxygenase activity, GO:0048830 - adventitious root development, GO:0046686 - response to cadmium ion, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus","TO:0000084 - root number, TO:0000615 - abscisic acid sensitivity, TO:0000031 - silicon sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000578 - root fresh weight, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0002672 - auxin content, TO:0001006 - adventitious root number","PO:0020103 - flag leaf ","Os01g0645400","LOC_Os01g45760.1, LOC_Os01g45760.2","Os09g0454600","Os01g0866400","Os12g0197500",1.4194412,1.5788475,null,"qHID-4-2(t) (qHID4-2)","qHID-4-2(t) (qHID4-2)","harvest index (QTL)-4-2(t)","harvest index (QTL)-4-2(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0196300","LOC_Os06g09610",3.1995986,"Os06g0695700","LOC_Os06g48050",0,1.3618697,{"$nulls":10},"Os01g0938100","Os03g0582000","Os07g0170300","Os07g0170300",-1.7040291,-1.0645069,null,"Os08g0502900",4.628408,"Os03g0725300",-1.614138,{"$nulls":29},"BHLH53","OsbHLH053, bHLH053, bHLH53, OsSPCH2, SPCH2","BASIC HELIX-LOOP-HELIX PROTEIN 53","basic helix-loop-helix protein 053, SPEECHLESS 2",2," Vegetative organ - Leaf","GO:0010377 - guard cell fate commitment, GO:0010444 - guard mother cell differentiation, GO:0010374 - stomatal complex development, GO:0010440 - stomatal lineage progression, GO:0005634 - nucleus","TO:0000566 - stomatal frequency",null,"Os02g0257500","LOC_Os02g15760.1",null,null,"Os01g0919800","Os02g0168100",-1.6955171,0,null,"RLCK298","OsRLCK298, PTK17, OsPTK17","RECEPTOR-LIKE CYTOPLASMIC KINASE 298","Receptor-like Cytoplasmic Kinase 298, Protein Tyrosine Kinase 17",10," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000172 - jasmonic acid sensitivity","PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os10g0395000","LOC_Os10g25550.1",{"$nulls":6},"HOX5","Oshox5, OsHox5, EIP9","HOMEOBOX GENE 5","rice homeobox gene 5, Homeobox-leucine zipper protein HOX5, Homeodomain transcription factor HOX5, HD-ZIP protein HOX5, EBR1-interacting protein 9",8," Seed,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os08g0416000","LOC_Os08g32080.1, LOC_Os08g32085.1",{"$nulls":6},"YUCCA3","OsYUCCA3, OsYUC3, YUC3","YUCCA-LIKE GENE 3","(YUCCA-like gene)",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009629 - response to gravity, GO:0004499 - flavin-containing monooxygenase activity, GO:0009851 - auxin biosynthetic process, GO:0016491 - oxidoreductase activity","TO:0002693 - gravity response trait",null,"Os01g0732700","LOC_Os01g53200.1","Os02g0704000","Os02g0658100","Os01g0901000",3.2319505,1.5737334,null,"qHID-4-3(t) (qHID4-3)","qHID-4-3(t) (qHID4-3)","harvest index (QTL)-4-3(t)","harvest index (QTL)-4-3(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0229700","LOC_Os07g12630",3.2081091,"Os06g0704700","LOC_Os06g49120",0,2.3237917,{"$nulls":10},"Os02g0197600","Os04g0459500","Os07g0246200","Os07g0246200",-1.8407364,-1.0358893,null,"Os03g0412300",4.613917,"Os05g0382550",-1.613327,{"$nulls":29},"BHLH54","OsbHLH054, bHLH054, bHLH54, OsSPCH1, SPCH1, SPCH","BASIC HELIX-LOOP-HELIX PROTEIN 54","basic helix-loop-helix protein 054, SPEECHLESS 1, SPEECHLESS1",6," Vegetative organ - Leaf","GO:0010444 - guard mother cell differentiation, GO:0010377 - guard cell fate commitment, GO:0010374 - stomatal complex development, GO:0010440 - stomatal lineage progression, GO:0005634 - nucleus",null,null,"Os06g0526100","LOC_Os06g33450.2, LOC_Os06g33450.1",{"$nulls":3},"Os05g0320700",-1.7367069,0,null,"RLCK299","OsRLCK299","RECEPTOR-LIKE CYTOPLASMIC KINASE 299","Receptor-like Cytoplasmic Kinase 299",10," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0405100","LOC_Os10g26520.1",{"$nulls":6},"HSP18.0-CII","OsHSP18.0-CII, Oshsp18.0-CII, OsHSP18.0, OsHSP18.2","18.0 KDA CLASS II HEAT SHOCK PROTEIN","18.0 kDa class II heat shock protein, small heat shock protein 18.0",1," Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0005635 - nuclear envelope, GO:0005737 - cytoplasm, GO:0009408 - response to heat, GO:0010431 - seed maturation, GO:0046907 - intracellular transport, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0007568 - aging","TO:0002661 - seed maturation, TO:0000430 - germination rate, TO:0000259 - heat tolerance, TO:0000250 - vigor related trait, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000435 - seed longevity","PO:0007632 - seed maturation stage , PO:0009010 - seed ","Os01g0184100","LOC_Os01g08860.1, LOC_Os01g08860.2",{"$nulls":6},"YUCCA4","OsYUCCA4, OsYUC4, YUC4, YUCCA6, OsYUCCA6","YUCCA-LIKE GENE 4","(YUCCA-like gene)",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009737 - response to abscisic acid stimulus, GO:0009851 - auxin biosynthetic process, GO:0004499 - flavin-containing monooxygenase activity, GO:0048653 - anther development, GO:0042594 - response to starvation, GO:0009901 - anther dehiscence, GO:0051607 - defense response to virus","TO:0000148 - viral disease resistance, TO:0002672 - auxin content, TO:0000615 - abscisic acid sensitivity","PO:0001004 - anther development stage , PO:0009066 - anther ","Os01g0224700","LOC_Os01g12490.1","Os04g0537900","Os10g0515200","Os11g0605500",2.1898155,1.5702606,null,"qHID-7-1(t) (qHID7-1)","qHID-7-1(t) (qHID7-1)","harvest index (QTL)-7-1(t)","harvest index (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0413000","LOC_Os03g29970",3.2168026,"Os06g0705100","LOC_Os06g49160",0,4.463914,{"$nulls":10},"Os02g0578400","Os06g0102100","Os01g0950700","Os01g0950700",-1.9666328,-2.1979692,null,"Os02g0532900",4.6136327,"Os05g0580900",-1.6132323,{"$nulls":29},"BHLH55","OsbHLH055, bHLH055, bHLH55, OsMUTE, MUTE","BASIC HELIX-LOOP-HELIX PROTEIN 55","basic helix-loop-helix protein 055",5," Vegetative organ - Leaf","GO:0010377 - guard cell fate commitment, GO:0005634 - nucleus, GO:0010374 - stomatal complex development, GO:0010444 - guard mother cell differentiation, GO:0010442 - guard cell morphogenesis",null,null,"Os05g0597000","LOC_Os05g51820.1",{"$nulls":3},"Os09g0466400",-1.799709,0,null,"RLCK300","OsRLCK300, PTK18, OsPTK18","RECEPTOR-LIKE CYTOPLASMIC KINASE 300","Receptor-like Cytoplasmic Kinase 300, Protein Tyrosine Kinase 18",10," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0030912 - response to deep water, GO:0048316 - seed development, GO:0009408 - response to heat, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development","TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000524 - submergence tolerance, TO:0000259 - heat tolerance, TO:0000653 - seed development trait","PO:0007632 - seed maturation stage , PO:0007010 - whole plant fruit ripening stage , PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os10g0431900","LOC_Os10g29620.1",{"$nulls":6},"ISA2","OsISA2, ISA II, OsISA II","ISOAMYLASE 2","isoamylase-2, isoamylase 2",5," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0043169 - cation binding, GO:0019156 - isoamylase activity",null,null,"Os05g0393700","LOC_Os05g32710.1",{"$nulls":6},"YUCCA6","OsYUCCA6, OsYUC6, YUC6","YUCCA-LIKE GENE 6","(YUCCA-like gene)",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009851 - auxin biosynthetic process, GO:0004499 - flavin-containing monooxygenase activity, GO:0051607 - defense response to virus, GO:0009629 - response to gravity","TO:0000020 - black streak dwarf virus resistance, TO:0002693 - gravity response trait, TO:0002672 - auxin content","PO:0005020 - vascular bundle , PO:0025275 - procambium , PO:0025127 - primordium , PO:0020148 - shoot apical meristem ","Os07g0437000","LOC_Os07g25540.1","Os04g0469800","Os04g0600200","Os09g0422500",3.34322,1.567009,null,"qHID-7-2(t) (qHID7-2)","qHID-7-2(t) (qHID7-2)","harvest index (QTL)-7-2(t)","harvest index (QTL)-7-2(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0563000","LOC_Os05g48850",3.2179844,"Os06g0725000","LOC_Os06g50930",0,3.0041504,{"$nulls":10},"Os02g0744900","Os08g0460000","Os03g0808600","Os03g0808600",-1.9889625,-0.9945205,null,"Os11g0112050",4.587917,"Os06g0685200",-1.6116563,{"$nulls":29},"BHLH59","OsbHLH059, bHLH059, OsbHLH59, bHLH59, OsPRI3, PRI3","BASIC HELIX-LOOP-HELIX PROTEIN 59","basic helix-loop-helix protein 059, POSITIVE REGULATOR OF IRON HOMEOSTASIS 3",2," Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009611 - response to wounding, GO:0005634 - nucleus, GO:0055072 - iron ion homeostasis, GO:0042594 - response to starvation, GO:0005829 - cytosol, GO:0009753 - response to jasmonic acid stimulus","TO:0000172 - jasmonic acid sensitivity, TO:0000326 - leaf color, TO:0000224 - iron sensitivity",null,"Os02g0116600","LOC_Os02g02480.3, LOC_Os02g02480.2, LOC_Os02g02480.1",{"$nulls":3},"Os07g0175100",-1.831513,0,null,"RLCK301","OsRLCK301","RECEPTOR-LIKE CYTOPLASMIC KINASE 301","Receptor-like Cytoplasmic Kinase 301",10," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0004672 - protein kinase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0442800","LOC_Os10g30600.1, LOC_Os10g30600.2",{"$nulls":6},"OSK1","osk1, SnRK1A, OsSnRK1A, OsSNRK1a, SnRK1A/OSK1, SnRK1a, OsSnRK1.2, SnRK1.2","PROTEIN KINASE 1","protein kinase 1, SnRK1A protein kinase, sucrose non-fermenting-1 related protein kinase 1a",5," Biochemical character,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010182 - sugar mediated signaling, GO:0006468 - protein amino acid phosphorylation, GO:0010431 - seed maturation, GO:0048316 - seed development, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0045926 - negative regulation of growth, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009628 - response to abiotic stimulus, GO:0009845 - seed germination, GO:2000028 - regulation of photoperiodism, flowering, GO:0051511 - negative regulation of unidimensional cell growth, GO:0051093 - negative regulation of developmental process, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009409 - response to cold","TO:0000137 - days to heading, TO:0002661 - seed maturation, TO:0000255 - sheath blight disease resistance, TO:0000356 - brown spot disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000253 - seed dormancy, TO:0000280 - seedling vigor, TO:0000346 - tiller number, TO:0000168 - abiotic stress trait, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000227 - root length, TO:0002616 - flowering time","PO:0001170 - seed development stage , PO:0007632 - seed maturation stage ","Os05g0530500 ","LOC_Os05g45420.3, LOC_Os05g45420.2, LOC_Os05g45420.1",{"$nulls":6},"YUCCA7","OsYUCCA7, OsYUC7, OsYUC5, YUC5, YUC7","YUCCA-LIKE GENE 7","(YUCCA-like gene)",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009629 - response to gravity, GO:0004499 - flavin-containing monooxygenase activity, GO:0009851 - auxin biosynthetic process","TO:0002693 - gravity response trait",null,"Os04g0128900","LOC_Os04g03980.1","Os05g0494200","Os01g0930400","Os08g0428400",2.029749,1.5630218,null,"qHID-8-1(t) (qHID8-1)","qHID-8-1(t) (qHID8-1)","harvest index (QTL)-8-1(t)","harvest index (QTL)-8-1(t)",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0659500","LOC_Os07g46540",3.2362716,"Os06g0725300","LOC_Os06g50960",0,2.522997,{"$nulls":10},"Os02g0764500","Os07g0586200","Os04g0402100","Os04g0402100",-2.2351904,-1.3851147,null,"Os03g0849900",4.582326,"Os03g0146400",-1.6110601,{"$nulls":29},"BLR1","OsbHLH079, OsbHLH79, bHLH079, bHLH79, OsBLR1, OsBCL2, BCL2","BRASSINOSTEROID-RESPONSIVE LEAF ANGLE REGULATOR 1","basic helix-loop-helix protein 079, Basic Helix-Loop-Helix 79, OsBC1-Like2, BC1-Like 2",2," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0051512 - positive regulation of unidimensional cell growth, GO:0001558 - regulation of cell growth, GO:0048366 - leaf development, GO:0048573 - photoperiodism, flowering, GO:0030308 - negative regulation of cell growth, GO:0009741 - response to brassinosteroid stimulus, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0046983 - protein dimerization activity","TO:0000655 - leaf development trait, TO:0002687 - cell elongation trait, TO:0002675 - gibberellic acid content, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0002730 - grain shape, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000397 - grain size, TO:0000396 - grain yield","PO:0009073 - stigma , PO:0009066 - anther , PO:0009036 - lodicule , PO:0009037 - lemma , PO:0009038 - palea , PO:0009005 - root , PO:0020033 - coleoptile ","Os02g0705500","LOC_Os02g47660.1",{"$nulls":3},"Os11g0173500",-1.8348898,0,null,"RLCK311","OsRLCK311","RECEPTOR-LIKE CYTOPLASMIC KINASE 311","Receptor-like Cytoplasmic Kinase 311",11," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010119 - regulation of stomatal movement, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009738 - abscisic acid mediated signaling, GO:0004672 - protein kinase activity, GO:0042742 - defense response to bacterium, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000522 - stomatal conductance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os11g0168600","LOC_Os11g06780.1",{"$nulls":6},"OSK4","osk4, OsK4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK24, OsSNRK1b, OsSnRK1.4, SnRK1.4","PROTEIN KINASE 4","protein kinase 4, autophagy 1c, AUTOPHAGY ASSOCIATED GENE 1C, SnRK1B protein kinase, sucrose non-fermenting-1 related protein kinase 1b",8," Biochemical character,  Reproductive organ - Heading date,  Seed - Morphological traits - Endosperm","GO:0004674 - protein serine/threonine kinase activity, GO:0009960 - endosperm development, GO:0006468 - protein amino acid phosphorylation, GO:0005524 - ATP binding, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0007165 - signal transduction","TO:0000137 - days to heading, TO:0000653 - seed development trait",null,"Os08g0484600","LOC_Os08g37800.1",{"$nulls":6},"PHB","prohibitin","PROHIBITIN","prohibitin",null," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0005739 - mitochondrion",{"$nulls":4},"Os05g0530400","Os03g0183200","Os03g0786400",0,1.5608987,null,"qHID-8-2(t) (qHID8-2)","qHID-8-2(t) (qHID8-2)","harvest index (QTL)-8-2(t)","harvest index (QTL)-8-2(t)",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0181700","LOC_Os11g07922",3.2697775,"Os07g0164200","LOC_Os07g06990",0,1.8467737,{"$nulls":10},"Os03g0343900","Os03g0300900","Os05g0197300","Os05g0197300",-3.1118813,-1.891696,null,"Os04g0515900",4.5724883,"Os12g0603800",-1.6109797,{"$nulls":29},"BHLH081","OsbHLH081, bHLH081, OsBC1, BC1","BASIC HELIX-LOOP-HELIX PROTEIN 81","basic helix-loop-helix protein 081, OsBUL1 COMPLEX1, BUL1 COMPLEX 1, BU1-LIKE 1 COMPLEX1, BU-LIKE1 COMPLEX1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape","GO:0051510 - regulation of unidimensional cell growth, GO:0009741 - response to brassinosteroid stimulus","TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000397 - grain size, TO:0002687 - cell elongation trait",null,"Os09g0510500","LOC_Os09g33580.1, LOC_Os09g33580.2",{"$nulls":3},"Os01g0103800",-1.854517,0,null,"RLCK320","OsRLCK320","RECEPTOR-LIKE CYTOPLASMIC KINASE 320","Receptor-like Cytoplasmic Kinase 320",11," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os11g0233800","LOC_Os11g12620.1",{"$nulls":6},"DSG1","OsMAPK6, MAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, OsDSG1","DWARF AND SMALL GRAIN 1","Mitogen-activated protein kinase 1, MAP kinase 1, MAP kinase 6, dwarf and small grain1",6," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010200 - response to chitin, GO:0005524 - ATP binding, GO:0009524 - phragmoplast, GO:0009651 - response to salt stress, GO:0010120 - camalexin biosynthetic process, GO:0006952 - defense response, GO:0009790 - embryonic development, GO:0009741 - response to brassinosteroid stimulus, GO:0002238 - response to molecule of fungal origin, GO:0009414 - response to water deprivation, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009409 - response to cold, GO:0009814 - defense response, incompatible interaction, GO:0009734 - auxin mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0009574 - preprophase band, GO:0043068 - positive regulation of programmed cell death, GO:0010268 - brassinosteroid homeostasis, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0004707 - MAP kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0048481 - ovule development, GO:0009742 - brassinosteroid mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0000165 - MAPKKK cascade, GO:0005737 - cytoplasm, GO:0006468 - protein amino acid phosphorylation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:2000038 - regulation of stomatal complex development, GO:0005802 - trans-Golgi network, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus, GO:0080136 - priming of cellular response to stress, GO:0009738 - abscisic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0009733 - response to auxin stimulus, GO:0006979 - response to oxidative stress, GO:2000037 - regulation of stomatal complex patterning, GO:0042127 - regulation of cell proliferation, GO:0051301 - cell division","TO:0000447 - filled grain number, TO:0002668 - jasmonic acid content, TO:0002677 - brassinosteroid sensitivity, TO:0002676 - brassinosteroid content, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000454 - stem borer resistance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000203 - bacterial leaf streak disease resistance, TO:0006032 - panicle size, TO:0002669 - diterpenoid phytoalexin content, TO:0000273 - armyworm resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000175 - bacterial blight disease resistance, TO:0000439 - fungal disease resistance, TO:0002660 - cytokinin content, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0000074 - blast disease, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os06g0154500","LOC_Os06g06090.2, LOC_Os06g06090.1",{"$nulls":6},"RBOHB","rbohB, OsrbohB, Os rbohB, OsRbohB, OsNox1, Nox1, Os-RbohB, RbohB, OsRboh1, Rboh1","RESPIRATORY BURST OXIDASE HOMOLOG B","Respiratory Burst Oxidase Homolog B, Respiratory Burst Oxidase Homologue B, NADPH oxidase 1",1," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043020 - NADPH oxidase complex, GO:0010266 - response to vitamin B1, GO:0004601 - peroxidase activity, GO:0009733 - response to auxin stimulus, GO:0043621 - protein self-association, GO:0002238 - response to molecule of fungal origin, GO:0009566 - fertilization, GO:0009845 - seed germination, GO:0050832 - defense response to fungus, GO:0009413 - response to flooding, GO:0006952 - defense response, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0016174 - NAD(P)H oxidase activity, GO:0016021 - integral to membrane, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0005509 - calcium ion binding, GO:0009408 - response to heat, GO:0005886 - plasma membrane","TO:0000112 - disease resistance, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000439 - fungal disease resistance, TO:0000524 - submergence tolerance",null,"Os01g0360200","LOC_Os01g25820.2, LOC_Os01g25820.1","Os06g0146100","Os01g0919800","Os10g0493600",1.6268731,1.5362161,null,"qNOP-1-1(t) (qNOP1-1)","qNOP-1-1(t) (qNOP1-1)","number of panicles per plant (QTL)-1-1(t)","number of panicles per plant (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0573600","LOC_Os06g37560",3.277757,"Os07g0189700","LOC_Os07g09140",0,3.8183568,{"$nulls":10},"Os03g0563300","Os10g0536500","Os11g0605500","Os11g0605500",2.1898155,1.5702606,null,"Os04g0536500",4.5497527,"Os01g0804200",-1.6088339,{"$nulls":29},"_","OsbHLH144, OsEnS-65, bHLH144, EnS-65, OsZOU-1, OsZOU1, ZOU-1, ZOU1","_","basic helix-loop-helix protein 144, endosperm-specific gene 65, ZHOUPI 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Endosperm","GO:0009790 - embryonic development, GO:0042335 - cuticle development, GO:0009960 - endosperm development, GO:0048316 - seed development","TO:0002627 - fruit width, TO:0000420 - fertility related trait, TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0002681 - leaf curling, TO:0000370 - leaf width, TO:0020034 - glume width","PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0009089 - endosperm , PO:0009010 - seed ","Os04g0429400","LOC_Os04g35010.1",{"$nulls":3},"Os02g0742200",-1.858441,0,null,"RLCK334","OsRLCK334","RECEPTOR-LIKE CYTOPLASMIC KINASE 334","Receptor-like Cytoplasmic Kinase 334",11," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os11g0556400","LOC_Os11g35274.1",{"$nulls":6},"NAC2","OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2, DLN113, OsDLN113","NAC DOMAIN-CONTAINING PROTEIN 2","NAC domain-containing protein 004, NAC domain-containing protein 4, NAC domain-containing protein 34, NAC domain-containing protein 58, miR164-targeted NAC2, Oryza miR164-targeted NAC2, Oryza sativa tillering1, ORESARA 1.2, DLN repressor 113, DLN motif protein 113",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination,  Other","GO:0006970 - response to osmotic stress, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009740 - gibberellic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0006350 - transcription, GO:0010150 - leaf senescence, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010187 - negative regulation of seed germination, GO:0010029 - regulation of seed germination, GO:0010942 - positive regulation of cell death, GO:0080036 - regulation of cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance, TO:0000017 - anatomy and morphology related trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0002768 - spikelet length, TO:0000656 - root development trait, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000227 - root length, TO:0000567 - tiller angle, TO:0002685 - crown root number, TO:0002660 - cytokinin content, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000145 - internode length, TO:0000095 - osmotic response sensitivity, TO:0000396 - grain yield, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000450 - grain yield per panicle","PO:0007045 - coleoptile emergence stage , PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage , PO:0000025 - root tip , PO:0000043 - crown root , PO:0005029 - root primordium , PO:0020121 - lateral root ","Os04g0460600","LOC_Os04g38720.1",{"$nulls":6},"RISBZ1","OsbZIP58, OsEnS-92, OsSMF1, SMF1, OsRISBZ1, RISBZ1/bZIP58","BZIP ACTIVATOR 1","bZIP transcription factor 58, rice seed b-Zipper 1, endosperm-specific gene 92, seed maturation factor 1, rice seed basic leucine zipper 1",7," Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Other","GO:0010371 - regulation of gibberellin biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0012501 - programmed cell death, GO:0009845 - seed germination, GO:0003700 - transcription factor activity, GO:0010431 - seed maturation, GO:0009408 - response to heat","TO:0002673 - amino acid content, TO:0000490 - protein composition related trait, TO:0002661 - seed maturation, TO:0000432 - temperature response trait","PO:0005360 - aleurone layer , PO:0007057 - 0 seed germination stage , PO:0007632 - seed maturation stage , PO:0009089 - endosperm ","Os07g0182000","LOC_Os07g08420.1","Os08g0424500","Os01g0224700","Os03g0712800",2.4170392,1.5344108,null,"qNOP-3-1(t) (qNOP3-1)","qNOP-3-1(t) (qNOP3-1)","number of panicles per plant (QTL)-3-1(t)","number of panicles per plant (QTL)-3-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0473900","LOC_Os08g36910",3.305474,"Os07g0226200","LOC_Os07g12390",0,1.9527107,{"$nulls":10},"Os03g0592500","Os04g0568600","Os03g0412800","Os03g0412800",2.1469824,2.1626768,null,"Os12g0190400",4.5458946,"Os01g0193900",-1.6069416,{"$nulls":29},"FIT","OsbHLH156, OsFIT/OsbHLH156, OsFIT, bHLH156, OsIROP1, IROP1","FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR","basic helix-loop-helix protein 156",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0042594 - response to starvation, GO:0055072 - iron ion homeostasis, GO:0005737 - cytoplasm, GO:0040007 - growth","TO:0000357 - growth and development trait, TO:0000224 - iron sensitivity, TO:0000326 - leaf color","PO:0009005 - root ","Os04g0381700","LOC_Os04g31290.1",{"$nulls":3},"Os07g0516300",-1.8637333,0,null,"RLCK348","OsRLCK348","RECEPTOR-LIKE CYTOPLASMIC KINASE 348","Receptor-like Cytoplasmic Kinase 348",11," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os11g0667600","LOC_Os11g44560.1",{"$nulls":6},"NRAMP2","OsNramp2, OsNRAMP2","BACTERIOCIDE EFFECT 2","homologues of mammalian Nramp2 gene",3," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0055072 - iron ion homeostasis, GO:0006537 - glutamate biosynthetic process, GO:0009094 - L-phenylalanine biosynthetic process, GO:0009088 - threonine biosynthetic process, GO:0006811 - ion transport, GO:0006523 - alanine biosynthetic process, GO:0009751 - response to salicylic acid stimulus, GO:0005215 - transporter activity, GO:0010033 - response to organic substance, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0046686 - response to cadmium ion, GO:0009705 - plant-type vacuole membrane, GO:0015086 - cadmium ion transmembrane transporter activity, GO:0005384 - manganese ion transmembrane transporter activity","TO:0002673 - amino acid content, TO:0000401 - plant growth hormone sensitivity","PO:0025034 - leaf ","Os03g0208500","LOC_Os03g11010.1",{"$nulls":6},"RPBF","OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3, OsRPBF, OsDOF7","PROLAMIN BOX BINDING FACTOR","rice (Oryza sativa) prolamin box binding factor, pyrimidine box-binding protein, endosperm-specific gene 34, Dof zinc factor 10, Dof transcription factor 10, DNA BINDING WITH ONE FINGER 10",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0045449 - regulation of transcription","TO:0002673 - amino acid content, TO:0000276 - drought tolerance, TO:0000179 - biotic stress trait",null,"Os02g0252400","LOC_Os02g15350.1","Os10g0496900","Os03g0188100","Os06g0572400",2.8347607,1.5327787,null,"qNOP-4-1(t) (qNOP4-1)","qNOP-4-1(t) (qNOP4-1)","number of panicles per plant (QTL)-4-1(t)","number of panicles per plant (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0144100","LOC_Os01g05080",3.3075333,"Os07g0229700","LOC_Os07g12630",0,3.2081091,{"$nulls":10},"Os03g0731100","Os01g0720500","Os06g0564500","Os06g0564500",2.0843341,2.37991,null,"Os08g0531100",4.5370812,"Os09g0405300",-1.6067966,{"$nulls":29},"ASMT11","OsASMT11","ACETYL-SEROTONIN METHYLTRANSFERASE 11","acetyl-serotonin methyltransferase 11",8," Biochemical character,  Vegetative organ - Leaf","GO:0007623 - circadian rhythm, GO:0009737 - response to abscisic acid stimulus, GO:0008171 - O-methyltransferase activity, GO:0019438 - aromatic compound biosynthetic process, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0032259 - methylation, GO:0046983 - protein dimerization activity","TO:0000124 - flag leaf angle, TO:0000615 - abscisic acid sensitivity","PO:0009005 - root ","Os08g0290700","LOC_Os08g19420.1",{"$nulls":3},"Os01g0160800",-2.0618272,0,null,"RLCK373","OsRLCK373","RECEPTOR-LIKE CYTOPLASMIC KINASE 373","Receptor-like Cytoplasmic Kinase 373",12," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0611100","LOC_Os12g41710.1, LOC_Os12g41710.2, LOC_Os12g41710.3, LOC_Os12g41710.4",{"$nulls":6},"NRAMP3","OsNramp3, OsNRAMP3","BACTERIOCIDE EFFECT 3","homologues of mammalian Nramp3 gene, Integral membrane protein OsNramp3",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010033 - response to organic substance, GO:0016021 - integral to membrane, GO:0055072 - iron ion homeostasis, GO:0009088 - threonine biosynthetic process, GO:0006523 - alanine biosynthetic process, GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0046686 - response to cadmium ion, GO:0030001 - metal ion transport, GO:0009094 - L-phenylalanine biosynthetic process, GO:0006537 - glutamate biosynthetic process","TO:0002673 - amino acid content","PO:0025034 - leaf ","Os06g0676000","LOC_Os06g46310.1, LOC_Os06g46310.2, LOC_Os06g46310.3",{"$nulls":6},"SCAMP1","Scamp1, OsSCAMP1","SECRETORY CARRIER MEMBRANE PROTEIN 1","rice (Oryza sativa) homolog of animal SCAMP1, secretory carrier-associated membrane protein 1",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015031 - protein transport, GO:0006897 - endocytosis, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0016020 - membrane, GO:0005769 - early endosome, GO:0016021 - integral to membrane, GO:0031410 - cytoplasmic vesicle, GO:0006898 - receptor-mediated endocytosis","TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity",null,"Os07g0564600","LOC_Os07g37740.1","Os08g0174500","Os01g0597800","Os06g0114200",0,1.5095987,null,"qNOP-4-2(t) (qNOP4-2)","qNOP-4-2(t) (qNOP4-2)","number of panicles per plant (QTL)-4-2(t)","number of panicles per plant (QTL)-4-2(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0119000","LOC_Os04g02880",3.3447883,"Os07g0258400","LOC_Os07g15460",0,-2.169833,{"$nulls":10},"Os03g0778100","Os06g0725000","Os01g0978100","Os01g0978100",1.4352293,1.7641544,null,"Os12g0249900",4.531137,"Os09g0406500",-1.6067966,{"$nulls":29},"MYB48","OsMYB48, OsMYB48-1, OsMYB48-2, OsMYB59, MYB59","MYB TRANSCRIPTION FACTOR 48","MYB transcription factor 48",1," Vegetative organ - Leaf,  Coloration,  Tolerance and resistance - Stress tolerance,  Other","GO:0010150 - leaf senescence, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0042594 - response to starvation, GO:0009963 - positive regulation of flavonoid biosynthetic process","TO:0002667 - abscisic acid content, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000008 - potassium sensitivity, TO:0000249 - leaf senescence",null,"Os01g0975300","LOC_Os01g74410.2, LOC_Os01g74410.1",{"$nulls":3},"Os03g0325600",-2.0727797,0,null,"NRFG5","OsRH51, RH51, OsNRFG5","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 5","RNA helicase 51, neo-tetraploid rice fertility related gene 5",6," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0003723 - RNA binding, GO:0004386 - helicase activity, GO:0005524 - ATP binding","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000371 - yield trait, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000455 - seed set percent",null,"Os06g0535100","LOC_Os06g34420.1",{"$nulls":6},"TUBA1","OsTubA1, TubA1, OS-TubA3, TubA3","TUBULIN ALPHA-1 CHAIN","Tubulin alpha-1 chain, Tubulin alpha-1",7," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0051258 - protein polymerization, GO:0005874 - microtubule, GO:0005525 - GTP binding, GO:0003924 - GTPase activity, GO:0007017 - microtubule-based process, GO:0005200 - structural constituent of cytoskeleton, GO:0046688 - response to copper ion, GO:0007018 - microtubule-based movement, GO:0009845 - seed germination, GO:0005737 - cytoplasm, GO:0005198 - structural molecule activity, GO:0009266 - response to temperature stimulus, GO:0016049 - cell growth","TO:0000432 - temperature response trait, TO:0000021 - copper sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os07g0574800","LOC_Os07g38730.1",{"$nulls":6},"SDG714","OsSDG714, OsSET5, OsSUVH4","SET DOMAIN GROUP PROTEIN 714","SET Domain Group Protein714, SET protein 5, SUVH Histone Methyltransferase 4",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046974 - histone methyltransferase activity (H3-K9 specific), GO:0046686 - response to cadmium ion, GO:0005634 - nucleus, GO:0042393 - histone binding, GO:0005694 - chromosome, GO:0008270 - zinc ion binding",null,null,"Os01g0927000","LOC_Os01g70220.1","Os04g0401000","Os01g0952800","Os04g0613700",0,1.5049185,null,"qNOP-12-1(t) (qNOP12-1)","qNOP-12-1(t) (qNOP12-1)","number of panicles per plant (QTL)-12-1(t)","number of panicles per plant (QTL)-12-1(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0691500","LOC_Os02g46560",3.364888,"Os07g0287400","LOC_Os07g18750",0,5.622683,{"$nulls":10},"Os04g0457000","Os01g0190300","Os09g0446800","Os09g0446800",1.2564974,1.9186751,null,"Os12g0541500",4.5302405,"Os04g0668900",-1.6065053,{"$nulls":29},"ZHD1","OsZHD1, ACL-D, OsACL-D","_","zinc finger homeodomain class homeobox transcription factor 1, abaxially curled and drooping leaf",9," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009793 - embryonic development ending in seed dormancy, GO:0003677 - DNA binding, GO:0048366 - leaf development","TO:0000068 - lodging incidence, TO:0000655 - leaf development trait, TO:0002681 - leaf curling, TO:0001012 - lateral root length",null,"Os09g0466400","LOC_Os09g29130.1",{"$nulls":3},"Os06g0208100",-2.105268,0,null,"NRFG4","OsRH52A, RH52A, OsNRFG4","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 4","RNA helicase 52A, neo-tetraploid rice fertility related gene 4",6," Vegetative organ - Culm,  Reproductive organ,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004386 - helicase activity, GO:0003723 - RNA binding, GO:0005524 - ATP binding","TO:0000152 - panicle number, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000421 - pollen fertility","PO:0020094 - plant egg cell ","Os06g0602400","LOC_Os06g40020.1",{"$nulls":6},"qSH1","qSH1, qsh1, qSH-1, RIL1, OsRIL1","Shattering (QTL)-1","QTL of seed shattering in chromosome 1, RI-LIKE1, erticillate rachis-like 1",1," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Seed - Physiological traits - Shattering","GO:0010492 - maintenance of shoot apical meristem identity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0080006 - internode patterning, GO:0010073 - meristem maintenance, GO:0003677 - DNA binding","TO:0000547 - primary branch number, TO:0000207 - plant height, TO:0000142 - secondary branching of inflorescence, TO:0006020 - shoot apical meristem development, TO:0006014 - phyllotaxy, TO:0000145 - internode length, TO:0000473 - grain shattering",null,"Os01g0848400","LOC_Os01g62920.1",{"$nulls":6},"WDA1","OsWDA1, Wda1, wda1, OS-CER1, OsGL1-5","WAX-DEFICIENT ANTHER 1","Wax-deficient anther1, Wax-deficient anther 1, WDA1 protein, Glossy1-homologous gene 5",10," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0010143 - cutin biosynthetic process, GO:0048653 - anther development, GO:0043668 - exine, GO:0010025 - wax biosynthetic process, GO:0005783 - endoplasmic reticulum","TO:0000187 - anther color, TO:0000531 - anther length, TO:0000214 - anther shape, TO:0000245 - pollen free, TO:0000709 - leaf gloss, TO:0000723 - microsporocyte development trait, TO:0000276 - drought tolerance","PO:0009071 - anther wall tapetum , PO:0000002 - anther wall , PO:0000022 - plant cuticle , PO:0000032 - tetrad of microspores , PO:0000282 - trichome , PO:0009066 - anther , PO:0020091 - obsolete microgametophyte , PO:0009073 - stigma , PO:0009036 - lodicule ","Os10g0471100","LOC_Os10g33250.3, LOC_Os10g33250.2, LOC_Os10g33250.1","Os09g0346500","Os10g0491000","Os01g0972200",0,1.5007988,null,"qNOP-12-2(t) (qNOP12-2)","qNOP-12-2(t) (qNOP12-2)","number of panicles per plant (QTL)-12-2(t)","number of panicles per plant (QTL)-12-2(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0234600","LOC_Os04g16680",3.3669853,"Os07g0413800","LOC_Os07g23120",0,4.0813904,{"$nulls":10},"Os05g0242400","Os05g0455200","Os01g0276100","Os01g0276100",-1.0096482,-0.97771454,null,"Os05g0455200",4.5274816,"Os07g0204100",-1.6056952,{"$nulls":29},"ZHD2","OsZHD2","_","zinc finger homeodomain class homeobox transcription factor 2",8," Vegetative organ - Leaf,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0048366 - leaf development, GO:0048364 - root development, GO:0003677 - DNA binding, GO:0010365 - positive regulation of ethylene biosynthetic process","TO:0000655 - leaf development trait, TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000396 - grain yield, TO:0002681 - leaf curling, TO:0000586 - seminal root length, TO:0000656 - root development trait, TO:0001013 - lateral root number","PO:0007520 - root development stage , PO:0000025 - root tip , PO:0020148 - shoot apical meristem ","Os08g0479400","LOC_Os08g37400.1",{"$nulls":3},"Os12g0268000",-2.1136835,0,null,"RLCK268","OsRLCK268","RECEPTOR-LIKE CYTOPLASMIC KINASE 268","Receptor-like Cytoplasmic Kinase 268",9," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0361100","LOC_Os09g19700.1",{"$nulls":6},"qSH11","qSH11","shattering (QTL)-11",null,11," Seed - Physiological traits - Shattering",{"$nulls":11},"XB3","Xb3","XA21 BINDING PROTEIN 3","Xa21-binding protein 3, receptor-like kinase Xa21-binding protein 3",5," Tolerance and resistance - Disease resistance","GO:0008270 - zinc ion binding, GO:0016301 - kinase activity, GO:0004872 - receptor activity, GO:0051865 - protein autoubiquitination, GO:0016567 - protein ubiquitination, GO:0042742 - defense response to bacterium, GO:0004842 - ubiquitin-protein ligase activity, GO:0005515 - protein binding","TO:0000175 - bacterial blight disease resistance","PO:0009025 - vascular leaf ","Os05g0112000","LOC_Os05g02130.1","Os07g0657900","Os09g0454600","Os09g0466100",0,1.4984407,null,"qTGWT-1-4(t) (qTGW1-1)","qTGWT-1-4(t) (qTGW1-1)","1000 grain weight (QTL)-1-4(t)","1000 grain weight (QTL)-1-4(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0163300","LOC_Os05g07060",3.399143,"Os07g0425000","LOC_Os07g24230",0,1.3912657,{"$nulls":10},"Os05g0405000","Os01g0210500","Os11g0629500","Os11g0629500",-1.433699,-1.4835685,null,"Os07g0586200",4.5226154,"Os12g0155000",-1.603726,{"$nulls":29},"_","OsPAL07, OsPAL, PAL07, OsPAL6, PAL6, PAL1, OsPAL7, PAL7","_","Phenylalanine ammonia-lyase 07",4," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0006559 - L-phenylalanine catabolic process, GO:0046688 - response to copper ion, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0009800 - cinnamic acid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009620 - response to fungus, GO:0009809 - lignin biosynthetic process, GO:0002213 - defense response to insect, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0009697 - salicylic acid biosynthetic process, GO:0010229 - inflorescence development, GO:0045548 - phenylalanine ammonia-lyase activity","TO:0000621 - inflorescence development trait, TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000021 - copper sensitivity, TO:0000424 - brown planthopper resistance, TO:0000207 - plant height, TO:0000326 - leaf color","PO:0020104 - leaf sheath , PO:0009047 - stem , PO:0001083 - inflorescence development stage ","Os04g0518400","LOC_Os04g43800.1",{"$nulls":3},"Os02g0532800",-2.137474,0,null,"RLCK207","OsPUB47, PUB47, OsRLCK207, OsUSP29, USP29","RECEPTOR-LIKE CYTOPLASMIC KINASE 207","plant U-box-containing protein 47, U-box protein 47, Receptor-like Cytoplasmic Kinase 207, universal stress protein 29",6," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0009611 - response to wounding, GO:0010229 - inflorescence development, GO:0006950 - response to stress, GO:0004842 - ubiquitin-protein ligase activity, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0007623 - circadian rhythm, GO:0000151 - ubiquitin ligase complex, GO:0004674 - protein serine/threonine kinase activity","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0574200","LOC_Os06g37620.1",{"$nulls":6},"qSH12","qSH12","shattering (QTL)-12",null,12," Seed - Physiological traits - Shattering",{"$nulls":11},"YGL1","OsYGL1, CHLG, Ygl1, CS, OsCHLG","YELLOW-GREEN LEAF 1","chlorina, Chl synthetase, Chlorophyll synthase, yellow green leaf 1",5," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0015995 - chlorophyll biosynthetic process, GO:0030154 - cell differentiation, GO:0015994 - chlorophyll metabolic process, GO:0051607 - defense response to virus, GO:0046408 - chlorophyll synthetase activity, GO:0009965 - leaf morphogenesis, GO:0006098 - pentose-phosphate shunt, GO:0046686 - response to cadmium ion, GO:0016117 - carotenoid biosynthetic process, GO:0009902 - chloroplast relocation, GO:0006364 - rRNA processing, GO:0019344 - cysteine biosynthetic process, GO:0031969 - chloroplast membrane, GO:0009534 - chloroplast thylakoid, GO:0042793 - transcription from plastid promoter, GO:0010027 - thylakoid membrane organization, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009416 - response to light stimulus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009073 - aromatic amino acid family biosynthetic process","TO:0000148 - viral disease resistance, TO:0000075 - light sensitivity, TO:0000020 - black streak dwarf virus resistance",null,"Os05g0349700","LOC_Os05g28200.2, LOC_Os05g28200.1","Os07g0678600","Os02g0704000","Os01g0851000",0,1.4919344,null,"qTGWT-1-5(t) (qTGW1-2)","qTGWT-1-5(t) (qTGW1-2)","1000 grain weight (QTL)-1-5(t)","1000 grain weight (QTL)-1-5(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os10g0531900","LOC_Os10g38820",3.415385,"Os07g0475700","LOC_Os07g29310",0,1.9867239,{"$nulls":10},"Os06g0107700","Os08g0428400","Os03g0266200","Os03g0266200",-1.7446078,-1.1778779,null,"Os03g0115700",4.5180345,"Os02g0605900",-1.6030992,{"$nulls":29},"EIF4D","eIF-4d, EIF4D, elF-4D, OseIF5A-2, eIF5A-2, EIF5A2","EUKARYOTIC INITIATION FACTOR 4D","eukaryotic initiation factor 4D, initiation factor eIF-4D",12," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0045905 - positive regulation of translational termination, GO:0003743 - translation initiation factor activity, GO:0003746 - translation elongation factor activity, GO:0010038 - response to metal ion, GO:0009651 - response to salt stress, GO:0009743 - response to carbohydrate stimulus, GO:0042594 - response to starvation, GO:0048366 - leaf development, GO:0006452 - translational frameshifting, GO:0008612 - peptidyl-lysine modification to hypusine, GO:0043022 - ribosome binding, GO:0045901 - positive regulation of translational elongation","TO:0000357 - growth and development trait, TO:0000480 - nutrient sensitivity, TO:0006001 - salt tolerance, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0009049 - inflorescence , PO:0025034 - leaf ","Os12g0507200","LOC_Os12g32240.1",{"$nulls":3},"Os01g0884200",-2.2922897,0,null,"RLCK69","OsPUB48, PUB48, OsRLCK69, OsUSP10, USP10","RECEPTOR-LIKE CYTOPLASMIC KINASE 69","plant U-box-containing protein 48, U-box protein 48, Receptor-like Cytoplasmic Kinase 69, universal stress protein 10",2," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0004842 - ubiquitin-protein ligase activity, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0004674 - protein serine/threonine kinase activity, GO:0006950 - response to stress, GO:0009413 - response to flooding, GO:0000151 - ubiquitin ligase complex, GO:0005524 - ATP binding","TO:0000621 - inflorescence development trait, TO:0000524 - submergence tolerance","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os02g0218600","LOC_Os02g12670.1",{"$nulls":6},"qSH2","qSH2","shattering (QTL)-2 ",null,2," Seed - Physiological traits - Shattering",{"$nulls":11},"WAK98","OsWAK98, OsRLCK287, RLCK287","WALL-ASSOCIATED KINASE GENE 98","Receptor-like Cytoplasmic Kinase 287",10," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0112700","LOC_Os10g02360.1","Os01g0206700","Os04g0644400","Os09g0474051",0,1.4868604,null,"qTGWT-1-6(t) (qTGW1-3)","qTGWT-1-6(t) (qTGW1-3)","1000 grain weight (QTL)-1-6(t)","1000 grain weight (QTL)-1-6(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0726300","LOC_Os02g49440",3.431485,"Os07g0510500","LOC_Os07g32630",0,5.8879046,{"$nulls":10},"Os06g0132400","Os05g0455500","Os06g0594100","Os06g0594100",-1.8793551,1.1202508,null,"Os03g0399800",4.5169587,"Os01g0128000",-1.60054,{"$nulls":29},"DYE1","cab, cab-n8, Lhca4, OsLhca4","DELAYED YELLOWING1","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4",8," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0046872 - metal ion binding, GO:0009765 - photosynthesis, light harvesting, GO:0018298 - protein-chromophore linkage, GO:0009941 - chloroplast envelope, GO:0010287 - plastoglobule, GO:0009522 - photosystem I, GO:0009534 - chloroplast thylakoid, GO:0009416 - response to light stimulus, GO:0009535 - chloroplast thylakoid membrane, GO:0016021 - integral to membrane, GO:0009523 - photosystem II, GO:0009768 - photosynthesis, light harvesting in photosystem I, GO:0016168 - chlorophyll binding","TO:0002664 - leaf yellowing tolerance, TO:0000326 - leaf color, TO:0000495 - chlorophyll content",null,"Os08g0435900","LOC_Os08g33820.1",{"$nulls":3},"Os10g0419500",-2.3851786,0,null,"RLCK307","OsPUB49, PUB49, OsRLCK307, OsUSP38, USP38","RECEPTOR-LIKE CYTOPLASMIC KINASE 307","plant U-box-containing protein 49, U-box protein 49, Receptor-like Cytoplasmic Kinase 307, universal stress protein 38",10," Biochemical character,  Reproductive organ - panicle,  Seed","GO:0000151 - ubiquitin ligase complex, GO:0010229 - inflorescence development, GO:0004842 - ubiquitin-protein ligase activity, GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0561500","LOC_Os10g41220.1",{"$nulls":6},"qSH5","qSH5","Shattering (QTL)-5",null,5," Seed - Physiological traits - Shattering",{"$nulls":11},"WAK112","OsWAK112, OsWAK112d","WALL-ASSOCIATED KINASE GENE 112","cell wall associated receptor kinase 112, cell wall associated receptor kinase 112d",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0010200 - response to chitin, GO:0005509 - calcium ion binding, GO:0010366 - negative regulation of ethylene biosynthetic process, GO:0005886 - plasma membrane, GO:0030247 - polysaccharide binding, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content","PO:0009073 - stigma , PO:0009029 - stamen , PO:0009038 - palea , PO:0020031 - radicle , PO:0009047 - stem , PO:0009005 - root , PO:0025034 - leaf , PO:0020105 - ligule , PO:0020033 - coleoptile ","Os10g0180800","LOC_Os10g10130.5, LOC_Os10g10130.4, LOC_Os10g10130.3, LOC_Os10g10130.2, LOC_Os10g10130.1","Os05g0332300","Os05g0469600","Os10g0564500",1.8656765,1.4809216,null,"qTGWT-3-3(t) (qTGW3-1)","qTGWT-3-3(t) (qTGW3-1)","1000 grain weight (QTL)-3-3(t)","1000 grain weight (QTL)-3-3(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0102700","LOC_Os03g01270",3.442166,"Os07g0517900","LOC_Os07g33420",0,2.2067585,{"$nulls":10},"Os06g0320500","Os07g0273700","Os03g0189400","Os03g0189400",-3.645768,-1.8898478,null,"Os04g0383700",4.5095916,"Os12g0514500",-1.598486,{"$nulls":29},"NAC106","ONAC106","NAC DOMAIN-CONTAINING PROTEIN 106","NAC domain-containing protein 106",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress, GO:0010150 - leaf senescence","TO:0000567 - tiller angle, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os08g0433500","LOC_Os08g33670.1",{"$nulls":3},"Os11g0184900",-2.4898646,0,null,"RLCK93","OsPUB50, PUB50, OsRLCK93","RECEPTOR-LIKE CYTOPLASMIC KINASE 93","plant U-box-containing protein 50, U-box protein 50, Receptor-like Cytoplasmic Kinase 93",3," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0004842 - ubiquitin-protein ligase activity, GO:0004674 - protein serine/threonine kinase activity, GO:0000151 - ubiquitin ligase complex, GO:0050832 - defense response to fungus","TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os03g0101200","LOC_Os03g01160.2",{"$nulls":6},"qSH8","sh8","shattering(QTL)-8","shattering8",8," Seed - Physiological traits - Shattering",{"$nulls":11},"WAK128","OsWAK128","WALL-ASSOCIATED KINASE GENE 128","Wall-associated kinase gene 128",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os12g0615100","LOC_Os12g42060.1, LOC_Os12g42060.2, LOC_Os12g42060.3","Os07g0150700","Os02g0814200","Os05g0566800",0,1.4706432,null,"qTGWT-3-4(t) (qTGW3-2)","qTGWT-3-4(t) (qTGW3-2)","1000 grain weight (QTL)-3-4(t)","1000 grain weight (QTL)-3-4(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0648300","LOC_Os02g43300",3.4605591,"Os07g0539100","LOC_Os07g35480",0,1.6647385,{"$nulls":10},"Os07g0105600","Os05g0500000","Os02g0101500","Os02g0101500",-4.8936963,2.1582224,null,"Os02g0826300",4.506241,"Os06g0224200",-1.5925931,{"$nulls":29},"YL3","ONAC109, NAC109, OsYL3","YELLOW LEAF 3","NAC domain-containing protein 109, yellow leaf 3",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046345 - abscisic acid catabolic process, GO:0009658 - chloroplast organization, GO:0051510 - regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010150 - leaf senescence, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0010364 - regulation of ethylene biosynthetic process","TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000357 - growth and development trait, TO:0000325 - soluble protein content, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000227 - root length, TO:0000145 - internode length, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000592 - 1000-dehulled grain weight, TO:0002667 - abscisic acid content, TO:0002675 - gibberellic acid content, TO:0002672 - auxin content","PO:0001054 - 4 leaf senescence stage ","Os09g0552800","LOC_Os09g38000.1",{"$nulls":3},"Os11g0124300",-2.5458815,0,null,"RLCK194","OsPUB51, PUB51, OsRLCK194, OsUSP27, USP27","RECEPTOR-LIKE CYTOPLASMIC KINASE 194","plant U-box-containing protein 51, U-box protein 51, Receptor-like Cytoplasmic Kinase 194, universal stress protein 27",6," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0000151 - ubiquitin ligase complex, GO:0004674 - protein serine/threonine kinase activity, GO:0009651 - response to salt stress, GO:0004842 - ubiquitin-protein ligase activity, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009507 - chloroplast, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0140800","LOC_Os06g04880.1",{"$nulls":6},"SNB","AP2/EREBP#073, AP2/EREBP73, AP2-3, SSH1, OsSSH1, OsSNB, DLN181, DLN181a, DLN181b, OsDLN181, OsDLN181a, OsDLN181b, SUI4, OsSUI4, SUI4/SNB","SUPERNUMERARY BRACT GENE","Supernumerary Bract gene, Supernumerary Bract, SUPERNUMERARY BRACT, supernumerary bract, transcription factor; SNB, APETALA2/ethylene-responsive element binding protein 73, APETALA2-3, suppression of shattering1, DLN repressor 181, DLN motif protein 181, shortened uppermost internode 4",7," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0009736 - cytokinin mediated signaling, GO:0009740 - gibberellic acid mediated signaling, GO:0009908 - flower development, GO:0010077 - maintenance of inflorescence meristem identity, GO:0005634 - nucleus, GO:0045449 - regulation of transcription, GO:0009832 - plant-type cell wall biogenesis, GO:0080006 - internode patterning, GO:0010022 - meristem determinacy, GO:0003700 - transcription factor activity, GO:0048506 - regulation of timing of meristematic phase transition, GO:0010092 - specification of organ identity","TO:0000225 - stamen number, TO:0000207 - plant height, TO:0000209 - palea number, TO:0000671 - pre-flowering flower abortion, TO:0006032 - panicle size, TO:0000436 - spikelet sterility, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000391 - seed size, TO:0006030 - spikelet meristem identity, TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000622 - flower development trait, TO:0000650 - lemma length, TO:0000208 - lemma number, TO:0000499 - flower anatomy and morphology trait, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009034 - flower bract , PO:0009036 - lodicule , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0235800","LOC_Os07g13170.2, LOC_Os07g13170.1",{"$nulls":6},"WAK129","OsWAK129, OsRLCK375, RLCK375","WALL-ASSOCIATED KINASE GENE 129","Receptor-like Cytoplasmic Kinase 375",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030247 - polysaccharide binding, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0005509 - calcium ion binding, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance",null,"Os12g0615300","LOC_Os12g42070.1","Os02g0110200","Os10g0437500","Os09g0442100",2.6503267,1.4673223,null,"qTGWT-3-5(t) (qTGW3-3)","qTGWT-3-5(t) (qTGW3-3)","1000 grain weight (QTL)-3-5(t)","1000 grain weight (QTL)-3-5(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os10g0533500","LOC_Os10g38940",3.4932086,"Os07g0567400","LOC_Os07g38000",0,5.170736,{"$nulls":10},"Os07g0148900","Os01g0946600","Os05g0456300","Os05g0456300",8.402199,7.4999757,null,"Os01g0192000",4.5031657,"Os02g0525900",-1.5875002,{"$nulls":29},"XDH1","OsXDH1","XANTHINE DEHYDROGENASE 1","Xanthine dehydrogenase, xanthine dehydrogenase 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042554 - superoxide anion generation, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046466 - membrane lipid catabolic process, GO:0050660 - FAD binding, GO:0009055 - electron carrier activity, GO:0009414 - response to water deprivation, GO:0046110 - xanthine metabolic process, GO:0005829 - cytosol, GO:0000302 - response to reactive oxygen species, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009416 - response to light stimulus, GO:0009408 - response to heat, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0004854 - xanthine dehydrogenase activity, GO:0005506 - iron ion binding","TO:0000371 - yield trait, TO:0000734 - grain length, TO:0000460 - light intensity sensitivity, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000605 - hydrogen peroxide content, TO:0000382 - 1000-seed weight, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000249 - leaf senescence, TO:0000432 - temperature response trait","PO:0009047 - stem , PO:0009005 - root , PO:0025034 - leaf ","Os03g0429800","LOC_Os03g31550.1, LOC_Os03g31550.2",{"$nulls":3},"Os07g0558100",-2.6159618,0,null,"RLCK280","OsPUB52, PUB52, OsRLCK280, OsUSP33, USP33","RECEPTOR-LIKE CYTOPLASMIC KINASE 280","plant U-box-containing protein 52, U-box protein 52, Receptor-like Cytoplasmic Kinase 280, universal stress protein 33",9," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009739 - response to gibberellin stimulus, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009751 - response to salicylic acid stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0000151 - ubiquitin ligase complex, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009611 - response to wounding, GO:0006950 - response to stress, GO:0004842 - ubiquitin-protein ligase activity, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0007623 - circadian rhythm","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000507 - osmotic adjustment capacity, TO:0000276 - drought tolerance, TO:0000653 - seed development trait","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0569800","LOC_Os09g39620.1",{"$nulls":6},"TGW6","tgw6, OsSTRL7, STRL7","TOTAL GRAIN WEIGHT6","total grain weight6, THOUSAND-GRAIN WEIGHT 6, STR-like 7",6," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009058 - biosynthetic process, GO:0016844 - strictosidine synthase activity, GO:0009683 - indoleacetic acid metabolic process, GO:0005783 - endoplasmic reticulum, GO:0016020 - membrane, GO:0016788 - hydrolase activity, acting on ester bonds","TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000734 - grain length",null,"Os06g0623700","LOC_Os06g41850.1",{"$nulls":6},"AMY1A","Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A, AmyI-1, OsAmyI-1","ALPHA-AMYLASE 1A","Alpha-amylase1A, Alpha-amylase-1A, Alpha-amylase isozyme 1B, Amylase-1, alpha-amylase I-1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding, GO:0005983 - starch catabolic process, GO:0009408 - response to heat, GO:0005987 - sucrose catabolic process, GO:0004556 - alpha-amylase activity, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000259 - heat tolerance",null,"Os02g0765600","LOC_Os02g52710.1","Os01g0360200","Os06g0653000","Os03g0667500",0,1.4625627,null,"qTGWT-6-2(t) (qTGW6-1)","qTGWT-6-2(t) (qTGW6-1)","1000 grain weight (QTL)-6-2(t)","1000 grain weight (QTL)-6-2(t)",6," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0683500","LOC_Os11g45710",3.5710804,"Os07g0633200","LOC_Os07g43950",0,-1.363359,{"$nulls":10},"Os07g0544800","Os02g0792000","Os11g0210500","Os11g0210500",3.2258322,-2.2529678,null,"Os04g0249900",4.5006657,"Os01g0920100",-1.5830997,{"$nulls":29},"LHR","OsLHR","LONG HAIRPIN-STRUCTURE CONTAINING NON-CODING RNA","Long Hairpin-structure containing non-coding RNA",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016246 - RNA interference, GO:0006306 - DNA methylation","TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000522 - stomatal conductance, TO:0000592 - 1000-dehulled grain weight, TO:0000370 - leaf width, TO:0000207 - plant height","PO:0009010 - seed , PO:0009005 - root ","Os12g0618400",{"$nulls":4},"Os12g0122000",-2.6847703,0,null,"RLCK285","OsPUB61, PUB61, OsRLCK285, OsUSP35, USP35","RECEPTOR-LIKE CYTOPLASMIC KINASE 285","plant U-box-containing protein 61, U-box protein 61, Receptor-like Cytoplasmic Kinase 285, universal stress protein 35",10," Biochemical character,  Reproductive organ - panicle,  Seed","GO:0000151 - ubiquitin ligase complex, GO:0004674 - protein serine/threonine kinase activity, GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004842 - ubiquitin-protein ligase activity","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os10g0100500","LOC_Os10g01060.1",{"$nulls":6},"TR1","tr1","TINY RICE 1","tiny rice",8," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development",{"$nulls":10},"AMY1C","Amy1A/C*(RAmy1A/C), alpha Amy10, Amy1C, RAmy1A/C, Amy1A/C*, Amy3, RAmy1C, OsAmy1C, alphaAmy10-C","ALPHA-AMYLASE 1C","Alpha-amylase1C, Alpha-amylase 1C, Amylase-3, Alpha-amylase-1A, alpha-amylase 10-C",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0004556 - alpha-amylase activity, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0005975 - carbohydrate metabolic process, GO:0005509 - calcium ion binding","TO:0000259 - heat tolerance","PO:0007057 - 0 seed germination stage ","Os02g0765400","LOC_Os02g52700.1","Os10g0180800","Os11g0499600","Os04g0612500",0,1.4602467,null,"qTGWT-10-2(t) (qTGW10-1)","qTGWT-10-2(t) (qTGW10-1)","1000 grain weight (QTL)-10-2(t)","1000 grain weight (QTL)-10-2(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0701500","LOC_Os03g49480",3.5719688,"Os07g0659500","LOC_Os07g46540",0,3.2362716,{"$nulls":10},"Os07g0558400","Os05g0419800","Os11g0210300","Os11g0210300",2.3903496,-1.0419011,null,"Os04g0455600",4.4854712,"Os03g0116000",-1.582964,{"$nulls":29},"TET13","OsSAP, SAP, OsTET13","TETRASPANIN 13","senescence associated protein, tetraspanin 13",9," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0005886 - plasma membrane, GO:0010150 - leaf senescence, GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0006970 - response to osmotic stress","TO:0000259 - heat tolerance, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0002657 - oxidative stress","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os09g0425900 ","LOC_Os09g25760.1",{"$nulls":3},"Os04g0398000",-2.758197,0,null,"RLCK197","OsPUB70, PUB70, OsRLCK197, UCIP19, OsUCIP19","RECEPTOR-LIKE CYTOPLASMIC KINASE 197","plant U-box-containing protein 70, U-box protein 70, Receptor-like Cytoplasmic Kinase 197, OsUBC26 Interact Protein 19",6," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0004842 - ubiquitin-protein ligase activity, GO:0048316 - seed development, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0000151 - ubiquitin ligase complex, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0163000","LOC_Os06g06760.1, LOC_Os06g06760.2, LOC_Os06g06760.3",{"$nulls":6},"WRKY37","OsWRKY37","WRKY GENE 37","Rice WRKY gene37",4," Seed,  Tolerance and resistance - Disease resistance,  Other","GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance",null,"Os04g0597300","LOC_Os04g50920.1",{"$nulls":6},"CDPK1","OsCDPK1, OsCPK1, CPK1","CALCIUM-DEPENDENT PROTEIN KINASE 1","calcium-dependent protein kinase",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0010857 - calcium-dependent protein kinase activity, GO:0009733 - response to auxin stimulus, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding","TO:0000163 - auxin sensitivity, TO:0000303 - cold tolerance",null,"Os01g0622600","LOC_Os01g43410.1","Os03g0132900","Os11g0141900","Os02g0212900",0,1.4578999,null,"qTGWT-10-3(t) (qTGW10-2)","qTGWT-10-3(t) (qTGW10-2)","1000 grain weight (QTL)-10-3(t)","1000 grain weight (QTL)-10-3(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os12g0510900","LOC_Os12g32620",3.5731878,"Os07g0678600","LOC_Os07g48100",0,-1.0833645,{"$nulls":10},"Os07g0562700","Os08g0345800","Os08g0345700","Os08g0345700",2.1321049,-1.2344389,null,"Os01g0329900",4.481261,"Os09g0133600",-1.5827652,{"$nulls":29},"MYB102","R2R3-MYB, OsMYB102","MYB TRANSCRIPTION FACTOR 102","Myb transcription factor 102",6," Vegetative organ - Leaf,  Other","GO:0009723 - response to ethylene stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0003682 - chromatin binding, GO:0003677 - DNA binding, GO:0090359 - negative regulation of abscisic acid biosynthetic process, GO:0009414 - response to water deprivation, GO:0009628 - response to abiotic stimulus, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0010200 - response to chitin, GO:0010150 - leaf senescence, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0046686 - response to cadmium ion, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus","TO:0000168 - abiotic stress trait, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os06g0637500","LOC_Os06g43090.1",{"$nulls":3},"Os02g0120100",-2.776417,0,null,"_","OsNMD3, NMD3","_","60S ribosomal subunit nuclear export adaptor NMD3",10," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits","GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0006611 - protein export from nucleus, GO:0007029 - endoplasmic reticulum organization, GO:0009834 - secondary cell wall biogenesis","TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000397 - grain size, TO:0000207 - plant height, TO:0000590 - grain weight",null,"Os10g0573900","LOC_Os10g42320.1",{"$nulls":6},"WRKY53","OsWRKY53, WRKY-53","WRKY GENE 53","Rice WRKY gene53",5," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009741 - response to brassinosteroid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0002213 - defense response to insect, GO:0080027 - response to herbivore, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0000454 - stem borer resistance, TO:0002677 - brassinosteroid sensitivity",null,"Os05g0343400","LOC_Os05g27730.1",{"$nulls":6},"CDPK4","OsCDPK4, OsCPK4, CPK4, CDPK1","CALCIUM-DEPENDENT PROTEIN KINASE 4","calcium-dependent protein kinase 4, Ca2 +-dependent protein kinase 4",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0010857 - calcium-dependent protein kinase activity, GO:0031348 - negative regulation of defense response, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0009735 - response to cytokinin stimulus, GO:0005509 - calcium ion binding, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin, GO:0002237 - response to molecule of bacterial origin","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000167 - cytokinin sensitivity",null,"Os02g0126400","LOC_Os02g03410.1, LOC_Os02g03410.2","Os08g0190100","Os06g0142350","Os01g0723400",1.6914802,1.4522462,null,"qTGWT-10-4(t) (qTGW10-3)","qTGWT-10-4(t) (qTGW10-3)","1000 grain weight (QTL)-10-4(t)","1000 grain weight (QTL)-10-4(t)",10," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0510500","LOC_Os09g33580",3.5891144,"Os07g0686600","LOC_Os07g48710",0,2.4509923,{"$nulls":10},"Os07g0577600","Os01g0850700","Os06g0326400","Os06g0326400",2.01738,2.1571176,null,"Os02g0163400",4.480375,"Os03g0241800",-1.5820802,{"$nulls":29},"FLP","OsFLP","FOUR LIPS",null,7," Vegetative organ - Leaf,  Other","GO:0010442 - guard cell morphogenesis, GO:0003677 - DNA binding, GO:0010374 - stomatal complex development, GO:0010377 - guard cell fate commitment, GO:0003682 - chromatin binding, GO:0010235 - guard mother cell cytokinesis",null,null,"Os07g0627300","LOC_Os07g43420.1",{"$nulls":3},"Os10g0389200",-2.9787807,0,null,"RLCK33","OsPti1b, OsRLCK33","RECEPTOR-LIKE CYTOPLASMIC KINASE 33","Pto-interacting protein 1b, Receptor-like Cytoplasmic Kinase 33",1," Reproductive organ - panicle,  Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0005524 - ATP binding","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os01g0323100","LOC_Os01g21970.1",{"$nulls":6},"AE","ae","AMYLOSE EXTENDER ",null,null," Seed - Physiological traits - Storage substances","GO:0007275 - multicellular organismal development, GO:0000271 - polysaccharide biosynthetic process",{"$nulls":10},"CDPK8","OsCDPK8, OsCPK8","CALCIUM-DEPENDENT PROTEIN KINASE 8","calcium-dependent protein kinase",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0005886 - plasma membrane, GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0009738 - abscisic acid mediated signaling, GO:0004698 - calcium-dependent protein kinase C activity, GO:0005509 - calcium ion binding, GO:0010857 - calcium-dependent protein kinase activity, GO:0009651 - response to salt stress, GO:0005634 - nucleus","TO:0000160 - UV light sensitivity",null,"Os03g0808600","LOC_Os03g59390.1","Os03g0237100","Os12g0138500","Os01g0578000",0,1.4502782,null,"TMS5","tms5, NAC18, ONAC023, ONAC23, NAC23, TMS5/ONAC023, OsEnS-30","THERMOSENSITIVE MALE STERILITY 5","thermosensitive male sterility5, NAC domain-containing protein 18, NAC domain-containing protein 023, NAC domain-containing protein 23, endosperm-specific gene 30",2," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Character as QTL - Yield and productivity,  Other","GO:0009266 - response to temperature stimulus, GO:0007275 - multicellular organismal development","TO:0000449 - grain yield per plant, TO:0000067 - genic male sterility-thermo sensitive, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000396 - grain yield",null,"Os02g0214500","LOC_Os02g12310.1"]
[{"$nulls":6},"Os05g0426800","LOC_Os05g35230",3.722933,"Os08g0101700","LOC_Os08g01140",0,1.7257352,{"$nulls":10},"Os08g0276100","Os03g0304800","Os09g0511900","Os09g0511900",5.1503463,3.6288593,null,"Os06g0317200",4.472512,"Os03g0157900",-1.5750166,{"$nulls":29},"_","R2R3-MYB, MYB48/59, OsMYB48/59","_",null,12," Vegetative organ - Leaf,  Coloration,  Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000524 - submergence tolerance",null,"Os12g0567300","LOC_Os12g37970.1, LOC_Os12g37970.3, LOC_Os12g37970.2",{"$nulls":3},"Os01g0385400",-3.0720632,0,null,"_","OsEnS-40, EnS-40","_","endosperm-specific gene 40",2," Reproductive organ - panicle","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0586900","LOC_Os02g37480.1",{"$nulls":6},"FLO5","OsSSIIIa, SSIII-2, OsSSIII-2, OsSS3A, SS3A, SS3a, OsSSSIIIa, SSIIIa, Flo5","FLOURY ENDOSPERM 5","SOLUBLE STARCH SYNTHASE III-2, SOLUBLE STARCH SYNTHASE IIIA, floury endosperm 5",8," Seed - Physiological traits - Storage substances","GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0005976 - polysaccharide metabolic process, GO:0009011 - starch synthase activity, GO:0019252 - starch biosynthetic process, GO:0009568 - amyloplast starch grain","TO:0000462 - gelatinization temperature, TO:0000667 - cooking or brewing quality, TO:0000488 - seed composition based quality trait","PO:0009089 - endosperm , PO:0009010 - seed ","Os08g0191433","LOC_Os08g09230.2, LOC_Os08g09230.1",{"$nulls":6},"CDPK9","OsCDPK9, OsCPK9, CPK9","CALCIUM-DEPENDENT PROTEIN KINASE 9","calcium-dependent protein kinase",3," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010857 - calcium-dependent protein kinase activity, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0002237 - response to molecule of bacterial origin, GO:0006970 - response to osmotic stress","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000180 - spikelet fertility",null,"Os03g0688300","LOC_Os03g48270.1","Os06g0486800","Os02g0767300","Os06g0597000",2.1740987,1.4440836,null,"qDTM-4-1(t) (dtm4.1)","qDTM-4-1(t) (dtm4.1)","days to maturity (QTL)-4-1(t)","days to maturity (QTL)-4-1(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os10g0544200","LOC_Os10g39750",3.7744904,"Os08g0104600","LOC_Os08g01380",0,3.9559326,{"$nulls":10},"Os08g0347500","Os05g0517500","Os03g0401300","Os03g0401300",4.925789,2.328625,null,"Os12g0510900",4.4667897,"Os04g0117900",-1.5737028,{"$nulls":29},"_","SWL1","_","SNOW-WHITE LEAF1, SNOW-WHITE LEAF 1",4," Vegetative organ - Leaf,  Coloration","GO:0009507 - chloroplast, GO:0009535 - chloroplast thylakoid membrane, GO:0048366 - leaf development, GO:0009790 - embryonic development, GO:0009658 - chloroplast organization","TO:0002715 - chloroplast development trait, TO:0000655 - leaf development trait, TO:0000069 - variegated leaf, TO:0000326 - leaf color",null,"Os04g0497900","LOC_Os04g42030.1",{"$nulls":3},"Os09g0532000",-3.135744,0,null,"ANA","Ana*","AWN DEVELOPMENT A","Awn development-a",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000146 - seed length, TO:0000072 - awn length","PO:0006032 - lemma awn , PO:0009010 - seed ",{"$nulls":8},"FLO3","flo3","FLOURY ENDOSPERM 3","floury endosperm3",6," Seed - Physiological traits - Storage substances","GO:0009568 - amyloplast starch grain, GO:0005976 - polysaccharide metabolic process",{"$nulls":10},"CDPK10","OsCDPK10, OsCPK10, CPK10","CALCIUM-DEPENDENT PROTEIN KINASE 10","calcium-dependent protein kinase",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0000302 - response to reactive oxygen species, GO:0042542 - response to hydrogen peroxide, GO:0046466 - membrane lipid catabolic process, GO:0010857 - calcium-dependent protein kinase activity, GO:0009735 - response to cytokinin stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000167 - cytokinin sensitivity, TO:0000276 - drought tolerance, TO:0000605 - hydrogen peroxide content",null,"Os03g0788500","LOC_Os03g57450.1","Os11g0106700","Os01g0795400","Os03g0389100",0,1.4400749,null,"qDTM-4-2(t) (dtm4.2)","qDTM-4-2(t) (dtm4.2)","days to maturity (QTL)-4-2(t)","days to maturity (QTL)-4-2(t)",4," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0672100","LOC_Os01g48130",3.7783573,"Os08g0161800","LOC_Os08g06450",0,1.4910184,{"$nulls":10},"Os08g0435900","Os08g0512500","Os08g0509400","Os08g0509400",3.9792273,3.9423048,null,"Os10g0466500",4.4661345,"Os01g0757900",-1.5733361,{"$nulls":29},"_","C4H2, OsC4H, OsC4HL, C4H, OsC4H2","_","cinnamate 4-hydroxylase 2, C4H-like gene, Cinnamate-4-Hydroxylase like gene",5," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009814 - defense response, incompatible interaction, GO:0006952 - defense response, GO:0009505 - plant-type cell wall, GO:0009506 - plasmodesma, GO:0009555 - pollen development, GO:0009611 - response to wounding, GO:0009699 - phenylpropanoid biosynthetic process, GO:0009807 - lignan biosynthetic process, GO:0009808 - lignin metabolic process, GO:0046688 - response to copper ion, GO:0010266 - response to vitamin B1, GO:0040007 - growth, GO:0009718 - anthocyanin biosynthetic process, GO:0002213 - defense response to insect, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding, GO:0005774 - vacuolar membrane, GO:0005506 - iron ion binding, GO:0005794 - Golgi apparatus, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0004497 - monooxygenase activity","TO:0000424 - brown planthopper resistance, TO:0000112 - disease resistance, TO:0000731 - lignin content, TO:0000021 - copper sensitivity, TO:0000733 - lignin biosynthesis trait, TO:0000326 - leaf color",null,"Os05g0320700","LOC_Os05g25640.1",{"$nulls":3},"Os04g0401700",-3.1895149,0,null,"ANB","Anb*","AWN DEVELOPMENT B","Awn development-b",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length, TO:0000146 - seed length","PO:0006032 - lemma awn , PO:0009009 - plant embryo ",{"$nulls":8},"MIK","MIK","'KITAAKE MUTANT' MINUTE GRAIN",null,11," Seed - Morphological traits","GO:0007275 - multicellular organismal development",{"$nulls":10},"ESL4","CDPK12, OsCDPK12, OsCPK12, CPK12, OsESL4","EARLY SENESCENCE LEAF 4","calcium-dependent protein kinase, Calcium-dependent protein kinase 12, Early senescence leaf 4",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009627 - systemic acquired resistance, GO:0006807 - nitrogen compound metabolic process, GO:0010150 - leaf senescence, GO:0009697 - salicylic acid biosynthetic process, GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000455 - seed set percent, TO:0000271 - inflorescence length, TO:0000440 - grain number per plant, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence","PO:0007633 - endosperm development stage ","Os04g0560600","LOC_Os04g47300.1","Os12g0106000","Os08g0473600","Os06g0486800",0,1.4346266,null,"qDTM-7-1(t) (dtm7.1)","qDTM-7-1(t) (dtm7.1)","days to maturity (QTL)-7-1(t)","days to maturity (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0123500","LOC_Os03g03164",3.811927,"Os08g0269700","LOC_Os08g16830",0,2.3445482,{"$nulls":10},"Os09g0346500","Os01g0930800","Os03g0736300","Os03g0736300",3.8959491,2.595525,null,"Os03g0246500",4.464298,"Os06g0541600",-1.5731025,{"$nulls":29},"LC4","OsFbox053, OsFbox53, Os_F0309, OsLC4","LEAF INCLINCATION 4","F-box protein 53, LEAF INCLINCATION4",1," Vegetative organ - Leaf","GO:0060776 - simple leaf morphogenesis, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0010305 - leaf vascular tissue pattern formation, GO:0001558 - regulation of cell growth, GO:0051510 - regulation of unidimensional cell growth, GO:0048366 - leaf development, GO:0009733 - response to auxin stimulus","TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending, TO:0000163 - auxin sensitivity","PO:0009005 - root , PO:0009010 - seed , PO:0009000 - pulvinus ","Os01g0923900","LOC_Os01g69940.1",{"$nulls":3},"Os05g0575000",-3.727555,0,null,"BD2","bd2","BEAKED LEMMA 2","beaked lemma2, beaked lemma 2, beaked lemma-2",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"NK1","NK1","NOTCHED KERNEL 1",null,null," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development",{"$nulls":10},"CDPK17","OsCDPK17, OsCPK17, CPK17, OsCPK17.1, OsCPK17.2, OsCPK17.3, OsCPK17.4, OsCPK17.5","CALCIUM-DEPENDENT PROTEIN KINASE 17","calcium-dependent protein kinase",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0005509 - calcium ion binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0010857 - calcium-dependent protein kinase activity, GO:0006109 - regulation of carbohydrate metabolic process, GO:0009733 - response to auxin stimulus","TO:0000303 - cold tolerance, TO:0000163 - auxin sensitivity",null,"Os07g0161600","LOC_Os07g06740.1, LOC_Os07g06740.2, LOC_Os07g06740.3","Os01g0177900","Os02g0700700","Os03g0794500",0,1.4252104,null,"qDTM-8-1(t) (dtm8.1)","qDTM-8-1(t) (dtm8.1)","days to maturity (QTL)-8-1(t)","days to maturity (QTL)-8-1(t)",8," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0227600","LOC_Os05g13940",3.817176,"Os08g0332700","LOC_Os08g24390",0,1.9147564,{"$nulls":10},"Os09g0439500","Os05g0189900","Os03g0735000","Os03g0735000",2.4854543,2.2307365,null,"Os07g0148600",4.4642086,"Os01g0650800",-1.5730438,{"$nulls":29},"CAB1R","cab1R, LHCP, CAB, OsLhcb1, Lhcb1, Cab1, OsCAB1, Lhcb1b, OsLhcb1b, CAB2R","CHLOROPHYLL A/B BINDING PROTEIN 1R","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"",9," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010114 - response to red light, GO:0009637 - response to blue light, GO:0000287 - magnesium ion binding, GO:0009522 - photosystem I, GO:0009507 - chloroplast, GO:0007623 - circadian rhythm, GO:0016021 - integral to membrane, GO:0018298 - protein-chromophore linkage, GO:0009536 - plastid, GO:0009535 - chloroplast thylakoid membrane, GO:0016168 - chlorophyll binding, GO:0009658 - chloroplast organization, GO:0015979 - photosynthesis, GO:0009765 - photosynthesis, light harvesting, GO:0009523 - photosystem II","TO:0002715 - chloroplast development trait, TO:0000159 - blue light sensitivity, TO:0000158 - red light sensitivity",null,"Os09g0346500","LOC_Os09g17740.1",{"$nulls":3},"Os05g0572000",-3.9512386,0,null,"CLW","clw","CLAW SHAPED SPIKELET","claw shaped spikelet",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009082 - spikelet floret , PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"ASA1","OASA1 (=ASA1), OsASA1, OASA1, OASA1(D323N), OASA1D","ANTHRANILATE SYNTHASE ALPHA-SUBUNIT 1","anthranilate synthase alpha subunit 1, feedback-insensitive a subunit of rice AS",3," Biochemical character,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste","GO:0000162 - tryptophan biosynthetic process, GO:0004049 - anthranilate synthase activity, GO:0051955 - regulation of amino acid transport","TO:0000409 - peak viscosity, TO:0000696 - starch content, TO:0000598 - protein content, TO:0000196 - amylose content, TO:0000266 - chalky endosperm, TO:0000462 - gelatinization temperature, TO:0000134 - alkali digestion",null,"Os03g0826500","LOC_Os03g61120.1",{"$nulls":6},"CDPK19","OsCDPK19, OsCPK19, OsCDPK2, CPK2, CDPK2","CALCIUM-DEPENDENT PROTEIN KINASE 19","calcium-dependent protein kinase, calcium-dependent protein kinase 2",7," Biochemical character,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance","GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0010857 - calcium-dependent protein kinase activity, GO:0009739 - response to gibberellin stimulus, GO:0009733 - response to auxin stimulus, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0051607 - defense response to virus","TO:0000163 - auxin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance",null,"Os07g0515100","LOC_Os07g33110.1, LOC_Os07g33110.2, LOC_Os07g33110.3, LOC_Os07g33110.4, LOC_Os07g33110.5","Os11g0167800","Os10g0478000","Os02g0154200",2.3735273,1.4195126,null,"qPPL-1-1(t) (ppl1.1)","qPPL-1-1(t) (ppl1.1)","panicles per plant (QTL)-1-1(t)","panicles per plant (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0189700","LOC_Os07g09140",3.8183568,"Os08g0414700","LOC_Os08g31980",0,2.293911,{"$nulls":10},"Os09g0481200","Os02g0753300","Os03g0329500","Os03g0329500",2.4628983,2.7066774,null,"Os03g0103000",4.460877,"Os04g0540500",-1.5697442,{"$nulls":29},"NYC1","nyc1, OsNYC1","NON-YELLOW COLORING 1","Chlorophyl b degrading enzyme, Chlase, Non-Yellow Coloring 1, non-yellow coloring1, Probable chlorophyll(ide) b reductase NYC1, chloroplastic, Protein NON-YELLOW COLORING 1, short-chain dehydrogenase/reductase NYC1",1," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0015996 - chlorophyll catabolic process, GO:0042170 - plastid membrane, GO:0009535 - chloroplast thylakoid membrane, GO:0016491 - oxidoreductase activity, GO:0010304 - PSII associated light-harvesting complex II catabolic process, GO:0055114 - oxidation reduction, GO:0010150 - leaf senescence, GO:0009536 - plastid, GO:0034256 - chlorophyll(ide) b reductase activity, GO:0005488 - binding, GO:0016021 - integral to membrane","TO:0000495 - chlorophyll content, TO:0000599 - enzyme activity, TO:0000249 - leaf senescence, TO:0002712 - stay green trait","PO:0009025 - vascular leaf , PO:0009037 - lemma , PO:0009038 - palea , PO:0020104 - leaf sheath , PO:0020122 - inflorescence axis , PO:0001054 - 4 leaf senescence stage ","Os01g0227100","LOC_Os01g12710.2, LOC_Os01g12710.1",{"$nulls":3},"Os07g0638400",-4.3782697,0,null,"FON2","fon2, FON4, OsFON4, FON2/FON4, TG1","FLORAL ORGAN NUMBER 2","floral organ number2, floral organ number 2, floral organ number-2, floral organ number4, floral organ number 4, twin-grain1, twin-grain 1",11," Reproductive organ - Heading date,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0030154 - cell differentiation, GO:0019827 - stem cell maintenance, GO:0009887 - organ morphogenesis, GO:0007275 - multicellular organismal development, GO:0005576 - extracellular region, GO:0009888 - tissue development","TO:0000499 - flower anatomy and morphology trait, TO:0002759 - grain number, TO:0000445 - seed number, TO:0006038 - floral organ number","PO:0009046 - flower ","Os11g0595400","LOC_Os11g38270.1",{"$nulls":6},"SH5","OsSH5, RI, SH5/RI, OsRI, VPB1, OsVPB1","SHATTERING 5","Shattering-5, erticillate rachis, verticillate primary branch 1",5," Reproductive organ - Inflorescence,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010492 - maintenance of shoot apical meristem identity, GO:0003677 - DNA binding, GO:0009809 - lignin biosynthetic process, GO:0080006 - internode patterning, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0010081 - regulation of inflorescence meristem growth, GO:0048507 - meristem development, GO:0010014 - meristem initiation, GO:0009755 - hormone-mediated signaling, GO:0010077 - maintenance of inflorescence meristem identity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010065 - primary meristem tissue development, GO:0010229 - inflorescence development, GO:0010073 - meristem maintenance","TO:0000142 - secondary branching of inflorescence, TO:0000547 - primary branch number, TO:0000473 - grain shattering, TO:0006020 - shoot apical meristem development, TO:0006014 - phyllotaxy, TO:0000733 - lignin biosynthesis trait, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000052 - primary branching of inflorescence, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000373 - inflorescence anatomy and morphology trait","PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0006327 - spikelet meristem ","Os05g0455200","LOC_Os05g38120.1",{"$nulls":6},"CDPK21","OsCDPK21, OsCPK21, CPK-21","CALCIUM-DEPENDENT PROTEIN KINASE 21","calcium-dependent protein kinase",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0010857 - calcium-dependent protein kinase activity, GO:0009737 - response to abscisic acid stimulus","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance","PO:0004506 - developing seed stage ","Os08g0540400","LOC_Os08g42750.1","Os11g0454000","Os07g0674800","Os06g0641800",0,1.4135418,null,"qPPL-1-2(t) (ppl1.2)","qPPL-1-2(t) (ppl1.2)","panicles per plant (QTL)-1-2(t)","panicles per plant (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0109200","LOC_Os06g01966",3.9187546,"Os08g0435900","LOC_Os08g33820",0,4.3340163,{"$nulls":10},"Os11g0242800","Os04g0548700","Os04g0513900","Os04g0513900",2.4258778,3.3421793,null,"Os04g0271700",4.4586425,"Os07g0585900",-1.5679756,{"$nulls":29},"YAB5","OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1, OsTPB1","YABBY 5","Protein YABBY 5, TONGARI-BOUSHI1, TONGARI-BOUSHI 1",4," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0048437 - floral organ development, GO:0048366 - leaf development, GO:0046872 - metal ion binding, GO:0010073 - meristem maintenance, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0009908 - flower development","TO:0000621 - inflorescence development trait, TO:0000622 - flower development trait, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0025477 - floral organ primordium , PO:0007615 - flower development stage , PO:0000017 - vascular leaf primordium , PO:0001083 - inflorescence development stage , PO:0025487 - bract primordium ","Os04g0536300","LOC_Os04g45330.1",{"$nulls":3},"Os02g0569900",-5.477722,0,null,"FOR1","for1*, for1","FLOWER ORGANIZATION 1","flower organization1, flower organization 1, flower organization-1",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0009888 - tissue development, GO:0009887 - organ morphogenesis","TO:0000499 - flower anatomy and morphology trait","PO:0009046 - flower ",{"$nulls":8},"SH6","SH6","SHATTERING 6",null,5," Seed - Physiological traits - Shattering",{"$nulls":11},"CDPK24","OsCDPK24, OsCPK24, OsCDPK14","CALCIUM-DEPENDENT PROTEIN KINASE 24","calcium-dependent protein kinase, calcium-dependent protein kinase 14",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0009409 - response to cold, GO:0010857 - calcium-dependent protein kinase activity, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0005886 - plasma membrane, GO:0005509 - calcium ion binding, GO:0009411 - response to UV, GO:0004674 - protein serine/threonine kinase activity","TO:0006002 - proline content, TO:0000303 - cold tolerance, TO:0000160 - UV light sensitivity, TO:0000166 - gibberellic acid sensitivity","PO:0009005 - root , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009047 - stem ","Os11g0171500","LOC_Os11g07040.1","Os03g0198600","Os03g0113000","Os01g0131900",0,1.4124184,null,"qPPL-2-1(t) (ppl2.1)","qPPL-2-1(t) (ppl2.1)","panicles per plant (QTL)-2-1(t)","panicles per plant (QTL)-2-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0439500","LOC_Os09g26810",3.9424746,"Os08g0460000","LOC_Os08g35760",0,7.935741,{"$nulls":10},"Os12g0274700","Os03g0413000","Os08g0345800","Os08g0345800",2.1964571,2.5752084,null,"Os02g0809800",4.45799,"Os04g0490500",-1.5664234,{"$nulls":29},"YGL1","OsYGL1, CHLG, Ygl1, CS, OsCHLG","YELLOW-GREEN LEAF 1","chlorina, Chl synthetase, Chlorophyll synthase, yellow green leaf 1",5," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0015995 - chlorophyll biosynthetic process, GO:0030154 - cell differentiation, GO:0015994 - chlorophyll metabolic process, GO:0051607 - defense response to virus, GO:0046408 - chlorophyll synthetase activity, GO:0009965 - leaf morphogenesis, GO:0006098 - pentose-phosphate shunt, GO:0046686 - response to cadmium ion, GO:0016117 - carotenoid biosynthetic process, GO:0009902 - chloroplast relocation, GO:0006364 - rRNA processing, GO:0019344 - cysteine biosynthetic process, GO:0031969 - chloroplast membrane, GO:0009534 - chloroplast thylakoid, GO:0042793 - transcription from plastid promoter, GO:0010027 - thylakoid membrane organization, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009416 - response to light stimulus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009073 - aromatic amino acid family biosynthetic process","TO:0000148 - viral disease resistance, TO:0000075 - light sensitivity, TO:0000020 - black streak dwarf virus resistance",null,"Os05g0349700","LOC_Os05g28200.2, LOC_Os05g28200.1",{"$nulls":3},"Os04g0282400",-6.613068,0,null,"G2","G2(Gm, Gl), Gl, Gm","LONG STERILE LEMMAS 2","Long sterile lemmas2, Long sterile lemmas 2, Long sterile lemmas-2",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000240 - sterile lemma length","PO:0009037 - lemma ",{"$nulls":8},"TR1","TR1","TINY RICE 1",null,8," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development",{"$nulls":10},"PSY1","OsPSY1","PHYTOENE SYNTHASE 1","phytoene synthase 1, PSY1-like gene",6," Biochemical character,  Coloration,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0016117 - carotenoid biosynthetic process, GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups, GO:0016767 - geranylgeranyl-diphosphate geranylgeranyltransferase activity, GO:0046905 - phytoene synthase activity, GO:0009416 - response to light stimulus, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000075 - light sensitivity",null,"Os06g0729000","LOC_Os06g51290.4, LOC_Os06g51290.3, LOC_Os06g51290.1, LOC_Os06g51290.2","Os09g0541000","Os05g0111300","Os08g0490600",2.1200368,1.3993632,null,"qPPL-11-1(t) (ppl11.1)","qPPL-11-1(t) (ppl11.1)","panicles per plant (QTL)-11-1(t)","panicles per plant (QTL)-11-1(t)",11," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0104600","LOC_Os08g01380",3.9559326,"Os08g0473900","LOC_Os08g36910",0,3.305474,{"$nulls":10},"Os12g0420400","Os01g0938100","Os03g0749300","Os03g0749300",1.5461766,1.8135477,null,"Os12g0225900",4.4526906,"Os11g0482200",-1.5626589,{"$nulls":29},"ESL4","CDPK12, OsCDPK12, OsCPK12, CPK12, OsESL4","EARLY SENESCENCE LEAF 4","calcium-dependent protein kinase, Calcium-dependent protein kinase 12, Early senescence leaf 4",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009627 - systemic acquired resistance, GO:0006807 - nitrogen compound metabolic process, GO:0010150 - leaf senescence, GO:0009697 - salicylic acid biosynthetic process, GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000455 - seed set percent, TO:0000271 - inflorescence length, TO:0000440 - grain number per plant, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence","PO:0007633 - endosperm development stage ","Os04g0560600","LOC_Os04g47300.1",{"$nulls":3},"Os07g0529000",-7.9519114,0,null,"IANA","IAna*","SUPPRESSOR FOR AWN A","Suppressor for awn, Suppressor for awn-a",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"MAPK4","OsMAPK4, OsMAP2, OsMSRMK3, OsMPK4, OsMPK7, MAP2, MSRMK3, MPK4, MPK7, MAPK7, OsMAPK7","MITOGEN-ACTIVATED PROTEIN KINASE 4","Mitogen-activated protein kinase 4, MAP kinase 4, Multiple stress-responsive MAP kinase 3",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0006950 - response to stress, GO:2000033 - regulation of seed dormancy, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0009737 - response to abscisic acid stimulus, GO:0009611 - response to wounding, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009411 - response to UV","TO:0000173 - ethylene sensitivity, TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000253 - seed dormancy",null,"Os06g0699400","LOC_Os06g48590.2, LOC_Os06g48590.1",{"$nulls":6},"PSY2","OsPSY2","PHYTOENE SYNTHASE 2","phytoene synthase 2",12," Biochemical character,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0010287 - plastoglobule, GO:0009058 - biosynthetic process, GO:0005829 - cytosol, GO:0009408 - response to heat, GO:0009507 - chloroplast, GO:0046905 - phytoene synthase activity, GO:0016117 - carotenoid biosynthetic process, GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups, GO:0009416 - response to light stimulus","TO:0000432 - temperature response trait, TO:0000075 - light sensitivity",null,"Os12g0626400","LOC_Os12g43130.1","Os01g0917400","Os11g0170900","Os03g0238600",0,1.3971219,null,"qPPL-11-2(t) (ppl11.2)","qPPL-11-2(t) (ppl11.2)","panicles per plant (QTL)-12-2(t)","panicles per plant (QTL)-12-2(t)",11," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os01g0668100","LOC_Os01g47780",3.9767025,"Os08g0483200","LOC_Os08g37700",0,1.2590462,{"$nulls":10},"Os01g0101200","Os02g0668500","Os01g0633100","Os01g0633100",1.5410696,1.1146822,null,"Os05g0515500",4.452006,"Os01g0840100",-1.5626196,{"$nulls":29},"CAB2R","cab2R, CAB-2, OsLhcp, Lhcb1, Lhcb1a, OsLhcb1, OsLhcb1a","CHLOROPHYLL A/B BINDING PROTEIN 2R","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"",1," Vegetative organ - Leaf","GO:0009523 - photosystem II, GO:0009658 - chloroplast organization, GO:0016168 - chlorophyll binding, GO:0009522 - photosystem I, GO:0009507 - chloroplast, GO:0016021 - integral to membrane, GO:0015979 - photosynthesis, GO:0009765 - photosynthesis, light harvesting, GO:0009536 - plastid, GO:0018298 - protein-chromophore linkage, GO:0009535 - chloroplast thylakoid membrane, GO:0000287 - magnesium ion binding","TO:0002715 - chloroplast development trait",null,"Os01g0600900","LOC_Os01g41710.1",{"$nulls":3},"Os02g0137800",0,-0.9468778,null,"IANB","IAnb*","SUPPRESSOR FOR AWN B","Suppressor for awn, Suppressor for awn-b",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"AMY3D","Amy3D/E*(RAmy3D/E), alpha Amy3, AmyII-4, AMY1.3, Amy3D, Amy3D/E*, RAmy3D/E, Amy3D_E, Amy8, aAmy3, RAmy3D, OsAmy3D, alphaAmy3","ALPHA-AMYLASE 3D","Alpha-amylase3D, Alpha-amylase isozyme 3D precursor, Alpha-amylase isozyme 3D, Alpha-amylase-3D, Amylase-8",8," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009413 - response to flooding, GO:0009873 - ethylene mediated signaling pathway, GO:0033500 - carbohydrate homeostasis, GO:0045927 - positive regulation of growth, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009723 - response to ethylene stimulus, GO:0009408 - response to heat","TO:0000253 - seed dormancy, TO:0000432 - temperature response trait, TO:0000168 - abiotic stress trait, TO:0000280 - seedling vigor, TO:0000173 - ethylene sensitivity, TO:0000259 - heat tolerance, TO:0000114 - flooding related trait, TO:0000449 - grain yield per plant",null,"Os08g0473900","LOC_Os08g36910.3, LOC_Os08g36910.2, LOC_Os08g36910.1",{"$nulls":6},"AMY3C","Amy3A/B/C*(RAmy3A/B/C), AmyII-6, AMY1.7, Amy3C, RAmy3A/B/C, Amy3A/B/C*, Amy7, AMY3B, RAmy3C, OsAmy3B","ALPHA-AMYLASE 3C","Alpha-amylase3C, Alpha-amylase isozyme 3C precursor, Alpha-amylase isozyme 3C, Amylase-7, Alpha-amylase-3A",9," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0009739 - response to gibberellin stimulus, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0004556 - alpha-amylase activity, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009408 - response to heat","TO:0000166 - gibberellic acid sensitivity, TO:0000259 - heat tolerance","PO:0007057 - 0 seed germination stage ","Os09g0457800","LOC_Os09g28420.1","Os07g0568300","Os01g0913300","Os03g0235900",0,1.3953772,null,"qGPP-2-2(t) (gpp2.1)","qGPP-2-2(t) (gpp2.1)","grains per panicle (QTL)-2-2(t)","grains per panicle (QTL)-2-2(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0702600","LOC_Os02g47420",4.0011487,"Os08g0489300","LOC_Os08g38170",0,6.915251,{"$nulls":10},"Os01g0221900","Os12g0582700","Os10g0437600","Os10g0437600",1.5073477,2.085221,null,"Os09g0420300",4.4511766,"Os01g0299700",-1.5609776,{"$nulls":29},"COW1","OsCOW1, oscow1, OsYUC8, YUC8, NAL7, OsNAL7, OsYUCCA8, YUCCA8, FMO, OsFMO(t), REIN7, YUC8/REIN7","CONSTITUTIVELY WILTED 1","CONSTITUTIVELY WILTED1, Constitutively wilted 1, NARROW LEAF7, NARROW LEAF 7, YUCCA-LIKE GENE 8, flavin monooxygenase, rice ethylene-insensitive 7",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048825 - cotyledon development, GO:0030104 - water homeostasis, GO:0009851 - auxin biosynthetic process, GO:0051607 - defense response to virus, GO:0010229 - inflorescence development, GO:0005829 - cytosol, GO:0047434 - indolepyruvate decarboxylase activity, GO:0022603 - regulation of anatomical structure morphogenesis, GO:0009911 - positive regulation of flower development, GO:0007275 - multicellular organismal development, GO:0005654 - nucleoplasm, GO:0009734 - auxin mediated signaling pathway, GO:0050661 - NADP or NADPH binding, GO:0050660 - FAD binding, GO:0004499 - flavin-containing monooxygenase activity, GO:0000139 - Golgi membrane","TO:0000148 - viral disease resistance, TO:0000492 - leaf shape","PO:0000025 - root tip , PO:0025034 - leaf , PO:0009047 - stem , PO:0020141 - stem node ","Os03g0162000","LOC_Os03g06654.2, LOC_Os03g06654.1",{"$nulls":3},"Os01g0195000",-0.9520299,-0.9494095,null,"LP2","lp2","LONG PALEA 2","long palea2, long palea 2, long palea-2",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"SPL4","OsSPL4","RICE SQUAMOSA PROMOTER-BINDING-LIKE 4","Squamosa promoter-binding-like protein 4",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0003677 - DNA binding, GO:0051302 - regulation of cell division, GO:0045449 - regulation of transcription, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0006350 - transcription, GO:0008270 - zinc ion binding, GO:0010229 - inflorescence development","TO:0000142 - secondary branching of inflorescence, TO:0000050 - inflorescence branching, TO:0000449 - grain yield per plant, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000455 - seed set percent, TO:0000399 - grain thickness, TO:0000456 - spikelet number, TO:0000612 - seed density, TO:0000052 - primary branching of inflorescence","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0174100","LOC_Os02g07780.1, LOC_Os02g07780.2",{"$nulls":6},"ACR2.1","CDC25.1, OsACR2.1, OsStr20, STR20","ARSENATE REDUCTASE 1","Sulfurtransferase 20",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004725 - protein tyrosine phosphatase activity, GO:0016791 - phosphatase activity, GO:0046685 - response to arsenic, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0009507 - chloroplast, GO:0008794 - arsenate reductase (glutaredoxin) activity, GO:0006468 - protein amino acid phosphorylation",null,null,"Os10g0545700","LOC_Os10g39860.1, LOC_Os10g39860.2","Os01g0274800","Os12g0197100","Os05g0405000",0,1.3920685,null,"qGPP-3-2(t) (gpp3.1)","qGPP-3-2(t) (gpp3.1)","grains per panicle (QTL)-3-2(t)","grains per panicle (QTL)-3-2(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0264800","LOC_Os06g15400",4.016331,"Os09g0369500","LOC_Os09g20400",0,-1.4270524,{"$nulls":10},"Os01g0227100","Os11g0308800","Os06g0683300","Os06g0683300",1.3159599,1.6149316,null,"Os04g0562500",4.449345,"Os04g0387000",-1.5609131,{"$nulls":29},"AHP1","OHP1, HPt, OsAHP1, Hpt2, Ohp1, OsHP2, OsHpt2, OsHPt2, OsHP02","HISTIDINE CONTAINING PHOSPHOTRANSMITTER 1","histidine containing phosphotransmitter, authentic His-containing phosphotransfer protein 1, Authentic Histidine Phosphotransfer protein 1",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0004871 - signal transducer activity, GO:0009736 - cytokinin mediated signaling, GO:0000160 - two-component signal transduction system (phosphorelay), GO:0009735 - response to cytokinin stimulus","TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000207 - plant height, TO:0000249 - leaf senescence, TO:0000346 - tiller number, TO:0000420 - fertility related trait, TO:0000227 - root length, TO:0000173 - ethylene sensitivity, TO:0000095 - osmotic response sensitivity",null,"Os08g0557700","LOC_Os08g44350.1",{"$nulls":3},"Os04g0484900",-1.1907401,-0.9539693,null,"MLS1","mls1","MALFORMED LEMMA 1","malformed lemma1, malformed lemma 1, malformed lemma-1",null," Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000436 - spikelet sterility, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000053 - pollen sterility","PO:0009037 - lemma , PO:0009038 - palea , PO:0009051 - spikelet , PO:0020091 - obsolete microgametophyte ",{"$nulls":8},"GLW7 ","OsSPL13, SPL13","GRAIN LENGTH AND WEIGHT ON CHROMOSOME 7 ","Squamosa promoter-binding-like protein 13, RICE SQUAMOSA PROMOTER-BINDING-LIKE 13, GRAIN LENGTH AND WIEIGHT ON CHROMOSOME 7",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0030307 - positive regulation of cell growth, GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0010050 - vegetative phase change, GO:0005634 - nucleus","TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000357 - growth and development trait",null,"Os07g0505200","LOC_Os07g32170.2, LOC_Os07g32170.1",{"$nulls":6},"SSIIB","OsSSIIb, OsSSII-2, SSII-2, SS2, OsSSSIIb, SS2b","SOLUBLE STARCH SYNTHASE IIB","Starch synthase-IIb, starch synthase IIb, \\Soluble starch synthase 2-2, chloroplastic/amyloplastic\\\", Soluble starch synthase II-2, Starch synthase isoform zSTSII-2\"",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009011 - starch synthase activity, GO:0019252 - starch biosynthetic process, GO:0009651 - response to salt stress, GO:0009501 - amyloplast","TO:0006001 - salt tolerance, TO:0000488 - seed composition based quality trait","PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0009010 - seed ","Os02g0744700","LOC_Os02g51070.1","Os09g0532400","Os03g0188400","Os02g0562700",0,1.3901037,null,"qGPL-1-1(t) (gpl1.1)","qGPL-1-1(t) (gpl1.1)","grains per plant (QTL)-1-1(t)","grains per plant (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0247100","LOC_Os02g14910",4.0527945,"Os09g0438100","LOC_Os09g26670",0,2.6970565,{"$nulls":10},"Os01g0232700","Os01g0926600","Os07g0510200","Os07g0510200",1.1478238,1.8603745,null,"Os12g0568200",4.445687,"Os03g0302100",-1.5604439,{"$nulls":29},"AHP2","OHP2, HPt, OsAHP2 Hpt3, Ohp2, OsHP1, OsHpt3, OsHP01","HISTIDINE CONTAINING PHOSPHOTRANSMITTER 2","histidine containing phosphotransmitter, authentic His-containing phosphotransfer protein 2",9," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0004871 - signal transducer activity, GO:0009735 - response to cytokinin stimulus, GO:0009736 - cytokinin mediated signaling, GO:0000160 - two-component signal transduction system (phosphorelay), GO:0009723 - response to ethylene stimulus","TO:0000167 - cytokinin sensitivity, TO:0000420 - fertility related trait, TO:0000249 - leaf senescence, TO:0000173 - ethylene sensitivity, TO:0000207 - plant height, TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000656 - root development trait, TO:0000346 - tiller number",null,"Os09g0567400","LOC_Os09g39400.2, LOC_Os09g39400.1",{"$nulls":3},"Os03g0826600",-1.0878702,-0.96084374,null,"MLS2","mls2","MALFORMED LEMMA 2","malformed lemma2, malformed lemma 2, malformed lemma-2",null," Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000436 - spikelet sterility, TO:0000053 - pollen sterility, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea , PO:0009051 - spikelet , PO:0020091 - obsolete microgametophyte ",{"$nulls":8},"GW8","SPL16, OsSPL16, SLP1, OsSLP1, qGW8","GRAIN-WIDTH 8","RICE SQUAMOSA PROMOTER-BINDING-LIKE 16, Squamosa promoter-binding-like protein 16, SQUAMOSA promoter-binding-like 16, stunted lemma palea 1, grain-width 8",8," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0008284 - positive regulation of cell proliferation, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0002661 - seed maturation, TO:0000402 - grain width, TO:0000162 - seed quality, TO:0000397 - grain size",null,"Os08g0531600","LOC_Os08g41940.1",{"$nulls":6},"SSIIIB","OsSSIIIb. SSIII-1, SSIIIa","SOLUBLE STARCH SYNTHASE IIIB",null,4," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0019252 - starch biosynthetic process, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0009011 - starch synthase activity, GO:0009408 - response to heat","TO:0000621 - inflorescence development trait, TO:0000259 - heat tolerance","PO:0009010 - seed , PO:0025034 - leaf , PO:0009089 - endosperm , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage ","Os04g0624600","LOC_Os04g53310.1","Os02g0553200","Os11g0702200","Os10g0370500",1.9080826,1.3736,null,"qGPL-2-1(t) (gpl2.1)","qGPL-2-1(t) (gpl2.1)","grains per plant (QTL)-2-1(t)","grains per plant (QTL)-2-1(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0483200","LOC_Os06g28820",4.0655737,"Os09g0439500","LOC_Os09g26810",0,3.9424746,{"$nulls":10},"Os01g0279100","Os02g0269200","Os06g0133000","Os06g0133000",-1.9926609,-2.2645013,null,"Os02g0628200",4.4422307,"Os01g0681800",-1.5585666,{"$nulls":29},"RL10","rl10","ROLLED LEAF 10",null,9," Vegetative organ - Leaf","GO:0030154 - cell differentiation",{"$nulls":7},"Os02g0643800",0,-0.9625449,null,"SUG1","Su g1","SUPPRESSOR FOR LONG STERILE LEMMAS G 1","Suppressor for long sterile lemmas (g1), SUPPRESSOR FOR LONG STERILE LEMMAS G1",null," Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000240 - sterile lemma length","PO:0009037 - lemma ",{"$nulls":8},"WAK4","OsWAK4, OsRLCK32, RLCK32","WALL-ASSOCIATED KINASE GENE 4","Receptor-like Cytoplasmic Kinase 32",1," Biochemical character,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease","PO:0001170 - seed development stage , PO:0009010 - seed ","Os01g0310800","LOC_Os01g20900.1, LOC_Os01g20900.2, LOC_Os01g20900.3, LOC_Os01g20900.4, LOC_Os01g20900.5, LOC_Os01g20900.6, LOC_Os01g20900.7",{"$nulls":6},"SSIVA","OsSSIVa, SSIV-1, OsSSIV-1","SOLUBLE STARCH SYNTHASE IVA","SOLUBLE STARCH SYNTHASE IV-1",1," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0019252 - starch biosynthetic process, GO:0009250 - glucan biosynthetic process, GO:0009011 - starch synthase activity","TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0001083 - inflorescence development stage ","Os01g0720600 ","LOC_Os01g52250.1, LOC_Os01g52250.2, LOC_Os01g52250.6, LOC_Os01g52250.5, LOC_Os01g52250.4, LOC_Os01g52250.3","Os01g0229400","Os04g0600900","Os01g0970600",0,1.3733307,null,"qGPL-12-1(t) (gpl12.1)","qGPL-12-1(t) (gpl12.1)","grains per plant (QTL)-12-1(t)","grains per plant (QTL)-12-1(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0413800","LOC_Os07g23120",4.0813904,"Os09g0459900","LOC_Os09g28580",0,6.248041,{"$nulls":10},"Os01g0528300","Os10g0378000","Os11g0701000","Os11g0701000",8.388633,2.0844676,null,"Os01g0956500",4.4381905,"Os01g0606900",-1.5562181,{"$nulls":29},"RL7","rl7","ROLLED LEAF 7",null,5," Vegetative organ - Leaf","GO:0030154 - cell differentiation",{"$nulls":7},"Os08g0503800",-1.2457505,-0.97760075,null,"MP1","mp1","MULTIPLE PISTIL 1","multiple pistil1, multiple pistil 1, multiple pistil-1",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0009887 - organ morphogenesis","TO:0000499 - flower anatomy and morphology trait","PO:0009046 - flower ",{"$nulls":8},"WAK45","OsWAK45, OsRLCK143, RLCK143","WALL-ASSOCIATED KINASE GENE 45","Receptor-like Cytoplasmic Kinase 143",4," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0030247 - polysaccharide binding, GO:0005524 - ATP binding, GO:0005509 - calcium ion binding, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0368800 ","LOC_Os04g30010.1",{"$nulls":6},"CATC","OsCat, OsCatC, OsCATC, NOE1, noe1, catC, OsCATC, CAT3, OsCAT3","CATALASE C","catalase C, catalase isozyme C, nitric oxide excess1",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0004096 - catalase activity, GO:0006801 - superoxide metabolic process, GO:0006979 - response to oxidative stress, GO:0005739 - mitochondrion, GO:0020037 - heme binding, GO:0009408 - response to heat","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress","PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os03g0131200","LOC_Os03g03910.1","Os04g0555000","Os07g0689600","Os02g0640500",3.5286038,1.3651978,null,"qGW-1-2(t) (gw1.1)","qGW-1-2(t) (gw1.1)","grain weight (QTL)-1-2(t)","grain weight (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os09g0491100","LOC_Os09g31430",4.143511,"Os09g0460300","LOC_Os09g28620",0,1.5051641,{"$nulls":10},"Os01g0622300","Os12g0155200","Os05g0135500","Os05g0135500",7.861364,9.636413,null,"Os08g0502600",4.427164,"Os04g0308000",-1.5558076,{"$nulls":29},"RL8","rl8","ROLLED LEAF 8",null,5," Vegetative organ - Leaf","GO:0030154 - cell differentiation",{"$nulls":7},"Os10g0520700",0,-0.9866403,null,"LAX1","lax, lax(lx), LAX1, lx, OsbHLH123, OsLAX1","LAX PANICLE 1","lax panicle, Transcription factor LAX PANICLE, lax panicle1, basic helix-loop-helix protein 123, LAX PANICLE1",1," Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0045449 - regulation of transcription, GO:0030528 - transcription regulator activity, GO:0007275 - multicellular organismal development, GO:0006350 - transcription, GO:0005634 - nucleus","TO:0000089 - panicle type, TO:0000501 - spikelet weight, TO:0000436 - spikelet sterility, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000152 - panicle number, TO:0000456 - spikelet number","PO:0009049 - inflorescence , PO:0009051 - spikelet ","Os01g0831000","LOC_Os01g61480.1",{"$nulls":6},"DEES1","WAK91, OsWAK91, OsDEES1","DEFECT IN EARLY EMBRYO SAC1","WALL-ASSOCIATED KINASE GENE 91",9," Biochemical character,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0010200 - response to chitin, GO:0004674 - protein serine/threonine kinase activity, GO:0030247 - polysaccharide binding, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000074 - blast disease",null,"Os09g0561600","LOC_Os09g38850.1",{"$nulls":6},"qBPH11","Qbph11","brown planthopper resistance (QTL) 11","brown planthopper resistance QTL",11," Tolerance and resistance - Insect resistance",{"$nulls":5},"Os05g0500600","Os02g0630300","Os01g0802000",0,1.3565899,null,"qGW-2-2(t) (gw2.1)","qGW-2-2(t) (gw2.1)","grain weight (QTL)-2-2(t)","grain weight (QTL)-2-2(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0582000","LOC_Os03g38540",4.2610555,"Os09g0481800","LOC_Os09g30410",0,2.126032,{"$nulls":10},"Os01g0652600","Os03g0239300","Os04g0678700","Os04g0678700",6.5093646,12.208504,null,"Os02g0753500",4.4211354,"Os08g0108200",-1.5532484,{"$nulls":29},"RL9","rl9, SLL1/RL9, SLL1, OsSLL1, OsADD1, ADD1, KANADI1","ROLLED LEAF 9","SHALLOT-LIKE1, SHALLOT-LIKE 1, ROLLED LEAF9, anther dehiscence defected 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0003682 - chromatin binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010158 - abaxial cell fate specification, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0010088 - phloem development, GO:0048364 - root development, GO:0048653 - anther development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0012501 - programmed cell death, GO:0048316 - seed development, GO:0009555 - pollen development","TO:0000655 - leaf development trait, TO:0001012 - lateral root length, TO:0000207 - plant height, TO:0000474 - glume opening, TO:0000391 - seed size, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000656 - root development trait, TO:0000085 - leaf rolling, TO:0000653 - seed development trait, TO:0000316 - photosynthetic ability, TO:0000053 - pollen sterility, TO:0000227 - root length, TO:0001006 - adventitious root number, TO:0000495 - chlorophyll content","PO:0001007 - pollen development stage , PO:0001050 - leaf development stage , PO:0006019 - leaf abaxial epidermis , PO:0001004 - anther development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0025426 - phloem development stage , PO:0020104 - leaf sheath , PO:0000293 - guard cell ","Os09g0395300","LOC_Os09g23200.1",{"$nulls":3},"Os03g0843300",0,-0.989985,null,"EG1","eg1, GY1, OsEG1, OsGY1","EXTRA GLUME 1","extra glume-1, extra glume 1, extra glume1, gaoyao1",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0016042 - lipid catabolic process, GO:0009507 - chloroplast, GO:0009408 - response to heat, GO:0030154 - cell differentiation, GO:0009873 - ethylene mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0009695 - jasmonic acid biosynthetic process, GO:0008970 - phospholipase A1 activity","TO:0000173 - ethylene sensitivity, TO:0006022 - floral organ development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0002668 - jasmonic acid content, TO:0001007 - coleoptile length, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000544 - mesocotyl length","PO:0009010 - seed , PO:0009082 - spikelet floret , PO:0009039 - glume ","Os01g0900400","LOC_Os01g67430.1",{"$nulls":6},"PGWC8","pgwc8","PERCENTAGE OF GRAINS WITH CHALKINESS",null,8," Seed - Physiological traits","GO:0007275 - multicellular organismal development",{"$nulls":10},"XA28","xa28","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 28","Xanthomonas oryzae pv. oryzae resistance 28",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os02g0643800","Os04g0249600","Os01g0206700",0,1.3550063,null,"qGW-3-4(t) (gw3.1)","qGW-3-4(t) (gw3.1)","grain weight (QTL)-3-4(t)","grain weight (QTL)-3-4(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0659100","LOC_Os04g56400",4.2717166,"Os09g0484900","LOC_Os09g31130",0,-1.9309164,{"$nulls":10},"Os01g0743400","Os01g0133900","Os07g0157600","Os07g0157600",5.2276287,5.6324897,null,"Os06g0179000",4.4132853,"Os07g0251200",-1.5525755,{"$nulls":29},"AGO1B","OsAGO1b, AGO1b, AGO1-2","ARGONAUTE 1B","Protein argonaute 1B",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048366 - leaf development, GO:0031047 - gene silencing by RNA, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding, GO:0005737 - cytoplasm","TO:0000421 - pollen fertility, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000655 - leaf development trait, TO:0000455 - seed set percent","PO:0000002 - anther wall , PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os04g0566500","LOC_Os04g47870.2, LOC_Os04g47870.1",{"$nulls":3},"Os07g0614400",0,-1.0024766,null,"HG","Hg, Fg","HAIRY GLUME","Hairy glume",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000419 - leaf anatomy and morphology trait, TO:0000055 - leaf lamina pubescence, TO:0000417 - lemma and palea pubescence","PO:0009025 - vascular leaf , PO:0009039 - glume , PO:0009088 - seed coat , PO:0020106 - leaf sheath auricle ",{"$nulls":8},"ABA8OX1","OsABA8OX1, CYP707A5, OsCYP707A5, ABA8ox1, OsABA8ox1, OsABA8'OH1, ABA8'OH1","ABA-8'-HYDROXYLASE 1","Abscisic acid 8'-hydroxylase 1, ABA 8'-hydroxylase 1 ; Cytochrome P450 707A5, ABA 8'-hydroxylase1",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0009737 - response to abscisic acid stimulus, GO:0010295 - (+)-abscisic acid 8'-hydroxylase activity, GO:0032940 - secretion by cell, GO:0055114 - oxidation reduction, GO:0009408 - response to heat, GO:0010029 - regulation of seed germination, GO:0005783 - endoplasmic reticulum, GO:0046345 - abscisic acid catabolic process, GO:0030912 - response to deep water, GO:0009414 - response to water deprivation, GO:0022900 - electron transport chain, GO:0009055 - electron carrier activity, GO:0006950 - response to stress, GO:0009845 - seed germination, GO:0009409 - response to cold, GO:0016491 - oxidoreductase activity, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000286 - submergence sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000430 - germination rate, TO:0000103 - deepwater stress, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000478 - abscisic acid concentration","PO:0007045 - coleoptile emergence stage , PO:0007057 - 0 seed germination stage , PO:0009006 - shoot system ","Os02g0703600","LOC_Os02g47470.3, LOC_Os02g47470.2, LOC_Os02g47470.1",{"$nulls":6},"XA29","Xa29","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 29","Xanthomonas oryzae pv. oryzae resistance 29",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os11g0705200","Os03g0165400","Os05g0455500",2.5600822,1.34377,null,"qGW-3-5(t) (gw3.2)","qGW-3-5(t) (gw3.2)","grain weight (QTL)-3-5(t)","grain weight (QTL)-3-5(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0131700","LOC_Os06g04090",4.2799582,"Os09g0491100","LOC_Os09g31430",0,4.143511,{"$nulls":10},"Os01g0848200","Os05g0533600","Os02g0833900","Os02g0833900",5.081926,3.2200165,null,"Os11g0559200",4.4121723,"Os01g0869200",-1.547753,{"$nulls":29},"DCL3A","OsDCL3a","DICER-LIKE 3A","Endoribonuclease Dicer homolog 3a, Dicer-like protein 3a",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0000287 - magnesium ion binding, GO:0031047 - gene silencing by RNA, GO:0003723 - RNA binding, GO:0006396 - RNA processing, GO:0050832 - defense response to fungus, GO:0003677 - DNA binding, GO:0004525 - ribonuclease III activity, GO:0004386 - helicase activity, GO:0030145 - manganese ion binding","TO:0000557 - secondary branch number, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000124 - flag leaf angle",null,"Os01g0909200","LOC_Os01g68120.1",{"$nulls":3},"Os03g0237100",0,-1.0076208,null,"AN3","An3","AWN 3","Awn3, Awn 3, Awn-3",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"ABA8OX2","OsABA8OX2, OsABA8ox2, CYP707A6, OsCYP707A6, OsAba-ox2, OsABA8ox2, OsABA8OH2, ABA8OH2, ABA8'-OH2, OsABA8'ox2, ABA8'ox2, OsABAX2, ABAX2, OsABA8'OH2, ABA8'OH2","ABA-8'-HYDROXYLASE 2","Abscisic acid 8'-hydroxylase 2, ABA 8'-hydroxylase 2, Cytochrome P450 707A6",8," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0046345 - abscisic acid catabolic process, GO:0009055 - electron carrier activity, GO:0009845 - seed germination, GO:0055114 - oxidation reduction, GO:0020037 - heme binding, GO:0009415 - response to water, GO:0010295 - (+)-abscisic acid 8'-hydroxylase activity, GO:0016021 - integral to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000237 - water stress trait","PO:0007057 - 0 seed germination stage ","Os08g0472800","LOC_Os08g36860.1",{"$nulls":6},"XA30","Xa30(t)","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 30","Xanthomonas oryzae pv. oryzae resistance 30",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os01g0165000","Os02g0208500","Os06g0704600",1.2104546,1.337017,null,"qGW-7-2(t) (gw7.1)","qGW-7-2(t) (gw7.1)","grain weight (QTL)-7-2(t)","grain weight (QTL)-7-2(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os04g0223300","LOC_Os04g14680",4.304131,"Os09g0537700","LOC_Os09g36680",0,3.1804707,{"$nulls":10},"Os01g0978100","Os03g0731100","Os10g0317900","Os10g0317900",5.0300117,6.3679175,null,"Os09g0487200",4.4057403,"Os02g0456000",-1.5458115,{"$nulls":29},"HB4","OSHB4, OsHox32, HOX32, OsHB4, Oshox32, PHB3","HOMEODOMAIN CONTAINING PROTEIN 4","Homeobox-leucine zipper protein HOX32, Homeodomain transcription factor HOX32, HD-ZIP protein HOX32, rice homeobox gene 32",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0048366 - leaf development, GO:0009416 - response to light stimulus, GO:0042546 - cell wall biogenesis, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009733 - response to auxin stimulus, GO:0046686 - response to cadmium ion, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000051 - stem strength, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000615 - abscisic acid sensitivity, TO:0000085 - leaf rolling, TO:0000075 - light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000206 - leaf angle","PO:0001050 - leaf development stage ","Os03g0640800","LOC_Os03g43930.2, LOC_Os03g43930.1",{"$nulls":3},"Os05g0110900",0,-1.02154,null,"AN1","An1","AWN 1","Awn1, Awn 1, Awn-1",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"ABA8OX3","OsABA8OX3, OsABA8ox3, CYP707A7, OsCYP707A7, OsAba-ox3, OsABA8ox3, OsABA8'ox3, ABA8'ox3, OsABAX3, ABAX3, OsABA8'OH3, ABA8'OH3","ABA-8'-HYDROXYLASE 3","Abscisic acid 8'-hydroxylase 3, ABA 8'-hydroxylase 3, Cytochrome P450 707A7",9," Biochemical character,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009408 - response to heat, GO:0051607 - defense response to virus, GO:0009055 - electron carrier activity, GO:0020037 - heme binding, GO:0060359 - response to ammonium ion, GO:0055114 - oxidation reduction, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0048364 - root development, GO:0010295 - (+)-abscisic acid 8'-hydroxylase activity, GO:0009845 - seed germination, GO:0046345 - abscisic acid catabolic process","TO:0000516 - relative root length, TO:0002667 - abscisic acid content, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0000578 - root fresh weight, TO:0000259 - heat tolerance, TO:0000656 - root development trait, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0007057 - 0 seed germination stage ","Os09g0457100","LOC_Os09g28390.1",{"$nulls":6},"XA31","Xa31","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 31","Xanthomonas oryzae pv. oryzae resistance 31",4," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os02g0115700","Os02g0635800","Os06g0240050",0,1.3349804,null,"qYLD-1-1(t) (yld1.1)","qYLD-1-1(t) (yld1.1)","yield per plant (QTL)-1-1(t)","yield per plant (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os08g0435900","LOC_Os08g33820",4.3340163,"Os09g0546900","LOC_Os09g37480",0,1.039621,{"$nulls":10},"Os02g0296800","Os04g0583200","Os02g0236800","Os02g0236800",5.022431,3.900514,null,"Os06g0677000",4.399954,"Os08g0535800",-1.5443617,{"$nulls":29},"ASR5","OsASR5, Asr5, Asr1, OsASR1, OsASR2, ASR2","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 5 PROTEIN","Abiotic Stress Responsive 1, \\ABA-, stress and ripening-induced protein 5\\\", \\\"abscisic acid-, stress- and ripening (ASR) gene 5\\\", \\\"abscisic acid, stress and ripening 2\\\"\"",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010044 - response to aluminum ion, GO:0006950 - response to stress, GO:0009723 - response to ethylene stimulus, GO:0042742 - defense response to bacterium, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0010119 - regulation of stomatal movement, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000522 - stomatal conductance, TO:0000255 - sheath blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000354 - aluminum sensitivity, TO:0006001 - salt tolerance, TO:0000173 - ethylene sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002667 - abscisic acid content, TO:0000303 - cold tolerance",null,"Os11g0167800","LOC_Os11g06720.1",{"$nulls":3},"Os03g0669000",-1.2880772,-1.0285134,null,"D11","d11(d8), dwf10, d8, D11/CYP724B1, d11, CYP724B1, GNS4, OsD11, PMM1, OsPMM1, PMM1/D11, NBG4, OsCPB1, CPB1, CPB1/D11","DWARF SHINKANEAIKOKU OR NOHRIN 28","shinkaneaikoku or nohrin 28 dwarf, DWARF SHINKANEAIKOKU OR NOHRIN 28, OsDWARF11, dwarf-11, Cytochrome P450 724B1, Dwarf protein 11, cytochrome P450 CYP724B1, DWARF11, grain number and size on chromosome 4, Panicle Morphology Mutant 1, Notched Belly Grain 4, CLUSTERED PRIMARY BRANCH 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0022900 - electron transport chain, GO:0006879 - cellular iron ion homeostasis, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling, GO:0048573 - photoperiodism, flowering, GO:0010029 - regulation of seed germination, GO:0051512 - positive regulation of unidimensional cell growth, GO:0016020 - membrane, GO:0009055 - electron carrier activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009826 - unidimensional cell growth, GO:0006826 - iron ion transport, GO:0009647 - skotomorphogenesis, GO:0008199 - ferric iron binding, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000206 - leaf angle, TO:0000455 - seed set percent, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000484 - seed shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000592 - 1000-dehulled grain weight, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000371 - yield trait, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0002730 - grain shape, TO:0000052 - primary branching of inflorescence, TO:0000396 - grain yield, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000456 - spikelet number, TO:0000391 - seed size, TO:0000329 - tillering ability, TO:0000397 - grain size, TO:0000139 - grains per panicle, TO:0000641 - primary branch length, TO:0000557 - secondary branch number, TO:0000501 - spikelet weight, TO:0000050 - inflorescence branching, TO:0000576 - stem length, TO:0000207 - plant height","PO:0020142 - stem internode , PO:0020122 - inflorescence axis , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009010 - seed , PO:0006321 - primary inflorescence branch ","Os04g0469800","LOC_Os04g39430.2, LOC_Os04g39430.1",{"$nulls":6},"CCA1","OsCCA1, OsLHY, LHY, LHY-like_chr.8, COC1, DLN203, OsDLN203, LEM1, OsLEM1, Nhd1, OsNhd1","CIRCADIAN CLOCK ASSOCIATED 1","LATE ELONGATED HYPOCOTYL, DLN repressor 203, DLN motif protein 203, lvp1 enhancer mutant 1, N-mediated heading date1",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Heterochrony,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010228 - vegetative to reproductive phase transition, GO:0009743 - response to carbohydrate stimulus, GO:0050832 - defense response to fungus, GO:0007623 - circadian rhythm, GO:0042752 - regulation of circadian rhythm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0019740 - nitrogen utilization, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009730 - detection of carbohydrate stimulus, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0002616 - flowering time, TO:0000346 - tiller number","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0000055 - bud , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os08g0157600","LOC_Os08g06110.2, LOC_Os08g06110.5, LOC_Os08g06110.4, LOC_Os08g06110.3",{"$nulls":6},"XA32","Xa32","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 32","Xanthomonas oryzae pv. oryzae resistance 32",11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os05g0405000","Os04g0538900","Os02g0220400",0,1.3303136,null,"qYLD-1-2(t) (yld1.2)","qYLD-1-2(t) (yld1.2)","yield per plant (QTL)-1-2(t)","yield per plant (QTL)-1-2(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os07g0273700","LOC_Os07g17230",4.3932843,"Os09g0560000","LOC_Os09g38710",0,2.5940719,{"$nulls":10},"Os02g0510200","Os03g0421800","Os06g0699500","Os06g0699500",4.9297743,3.7381475,null,"Os06g0676900",4.399954,"Os04g0600200",-1.5403436,{"$nulls":29},"LF1","HOX10, Oshox10, OsHox10, OsHB1, HB1, OSHB1, LF1/OsHB1, OsLF1","LATERAL FLORET 1","rice homeobox gene 10, Homeobox-leucine zipper protein HOX10, Homeodomain transcription factor HOX10, HD-ZIP protein HOX10, HOMEODOMAIN CONTAINING PROTEIN 1, Homeodomain transcription factor HOX10, lateral florets 1",3," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009955 - adaxial/abaxial pattern formation, GO:0006350 - transcription, GO:0048366 - leaf development, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0010582 - floral meristem determinacy, GO:0009908 - flower development, GO:0001708 - cell fate specification, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000614 - lemma shape, TO:0002672 - auxin content, TO:0000657 - spikelet anatomy and morphology trait","PO:0001050 - leaf development stage , PO:0009037 - lemma , PO:0005352 - xylem , PO:0006022 - bundle sheath extension , PO:0020148 - shoot apical meristem , PO:0000017 - vascular leaf primordium , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root ","Os03g0109400","LOC_Os03g01890.2, LOC_Os03g01890.1",{"$nulls":3},"Os12g0163600",0,-1.0337161,null,"MLS3","mls3","MALFORMED LEMMA 3","malformed spikelet3 (lemma3 ?), malformed spikelet 3, malformed spikelet-3",4," Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000436 - spikelet sterility, TO:0000432 - temperature response trait, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0000003 - whole plant , PO:0009037 - lemma , PO:0009038 - palea , PO:0009051 - spikelet ",{"$nulls":8},"GSN1","MKP1, OsMKP1, osmkp1, LARGE8, GLA1, OsGLA1","GRAIN SIZE AND NUMBER1","Oryza sativa Mitogen-Activated Protein Kinase Phosphatase 1, Mitogen-Activated Protein Kinase Phosphatase 1, MAPK phosphatase 1, large grain8, LARGE GRAIN 8, grain size and number1, grain size and number 1, grain length and awn 1",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008285 - negative regulation of cell proliferation, GO:0045595 - regulation of cell differentiation, GO:0006470 - protein amino acid dephosphorylation, GO:0048316 - seed development, GO:0004725 - protein tyrosine phosphatase activity, GO:0008138 - protein tyrosine/serine/threonine phosphatase activity, GO:0009651 - response to salt stress, GO:0016301 - kinase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0010225 - response to UV-C, GO:0033549 - MAP kinase phosphatase activity, GO:0042127 - regulation of cell proliferation, GO:0005737 - cytoplasm","TO:0000653 - seed development trait, TO:0000181 - seed weight, TO:0000547 - primary branch number, TO:0002660 - cytokinin content, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000557 - secondary branch number, TO:0000072 - awn length, TO:0002759 - grain number, TO:0006032 - panicle size","PO:0009066 - anther , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009047 - stem , PO:0009051 - spikelet , PO:0009039 - glume , PO:0025349 - awn ","Os05g0115800","LOC_Os05g02500.3, LOC_Os05g02500.2, LOC_Os05g02500.1",{"$nulls":6},"XA22","Xa22, Xa22*, RXa20, Xa(t), Xa22(t)","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 22","Xanthomonas oryzae pv. oryzae resistance 22, Xanthomonas campestris pv. oryzae resistance-22, Xanthomonas oryzae pv. oryzae resistance-22, Xa22 candidate",11," Tolerance and resistance - Disease resistance","GO:0040029 - regulation of gene expression, epigenetic, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os11g0689500/Os11g0689650","LOC_Os11g46250.1","Os03g0118400","Os12g0106300","Os05g0447200",1.8482307,1.2837814,null,"qYLD-2-2(t) (yld2.1)","qYLD-2-2(t) (yld2.1)","yield per plant (QTL)-2-2(t)","yield per plant (QTL)-2-2(t)",2," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os05g0232200","LOC_Os05g14270",4.457756,"Os10g0111700","LOC_Os10g02260",0,5.1882243,{"$nulls":10},"Os02g0562700","Os03g0773700","Os06g0179000","Os06g0179000",4.4132853,5.533913,null,"Os06g0247500",4.3934584,"Os04g0573900",-1.538496,{"$nulls":29},"DLT","dlt, OsGRAS32, OsDLT, OsDLT1, DTL1, OsGRAS-32, OsGRAS32, GRAS-32, GRAS32, SMOS2/DLT, SMOS2, OsSMOS2","DWARF AND LOW-TILLERING","GRAS protein 32, SMALL ORGAN SIZE 2",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0008283 - cell proliferation, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling","TO:0002601 - stamen size, TO:0000329 - tillering ability, TO:0001035 - stem width, TO:0000326 - leaf color, TO:0000227 - root length, TO:0000206 - leaf angle, TO:0002637 - leaf size, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0002677 - brassinosteroid sensitivity, TO:0002684 - plant cell size, TO:0000346 - tiller number, TO:0002602 - pistil size, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending",null,"Os06g0127800","LOC_Os06g03710.1",{"$nulls":3},"Os08g0250900",-1.4197196,-1.0348444,null,"AN2","An2","AWN 2","Awn2, Awn 2, Awn-2",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"NCED2","OSNCED2, OsNCED2, OsNCED5, NCED5","9-CIS-EPOXYCAROTENOID DIOXYGENASE 2","9-cis-epoxycarotenoid dioxygenase 2",12," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0009845 - seed germination, GO:0009688 - abscisic acid biosynthetic process, GO:0001666 - response to hypoxia, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0002667 - abscisic acid content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000015 - oxygen sensitivity","PO:0007057 - 0 seed germination stage ","Os12g0617400","LOC_Os12g42280.1",{"$nulls":6},"ALT9","Alt-9, qPRE-9","ALUMINIUM TOLERANCE 9","alminium tolerance 9",9," Tolerance and resistance - Stress tolerance","GO:0010038 - response to metal ion",{"$nulls":4},"Os04g0659100","Os01g0880800","Os04g0435700",0,1.2835745,null,"qGG-7-1(t) (GG)","qGG-7-1(t) (GG)","green rice percentage (QTL)-7-1(t)","green rice percentage (QTL)-7-1(t)",7," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os06g0705100","LOC_Os06g49160",4.463914,"Os10g0150600","LOC_Os10g05980",0,2.3875122,{"$nulls":10},"Os02g0608600","Os02g0733300","Os03g0819600","Os03g0819600",4.391084,4.5862184,null,"Os02g0747400",4.3927207,"Os01g0114300",-1.5384606,{"$nulls":29}," LIC","OsC3H46, C3H46, OsLIC","LEAF AND TILLER ANGLE INCREASED CONTROLLER","Zinc finger CCCH domain-containing protein 46, LEAF and TILLER ANGLE INCREASED CONTROLLER",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0008270 - zinc ion binding, GO:0009742 - brassinosteroid mediated signaling, GO:0005739 - mitochondrion, GO:0003677 - DNA binding","TO:0000567 - tiller angle, TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000445 - seed number, TO:0000207 - plant height, TO:0000206 - leaf angle",null,"Os06g0704300","LOC_Os06g49080.1",{"$nulls":3},"Os07g0690900",0,-1.0373789,null,"BD1","bd1","BEAKED LEMMA 1","beaked lemma1, beaked lemma 1, beaked lemma-1",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"NCED3","OSNCED3, OsNCED-3, OsNCED3, OsNCED4, NCED4, OsNECD2","9-CIS-EPOXYCAROTENOID DIOXYGENASE 3","9-cis-epoxycarotenoid dioxygenase 3",7," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009688 - abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0001666 - response to hypoxia, GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0009408 - response to heat","TO:0006001 - salt tolerance, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000015 - oxygen sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance","PO:0007022 - seed imbibition stage , PO:0007057 - 0 seed germination stage ","Os07g0154100","LOC_Os07g05940.1",{"$nulls":6},"CRL4","CHARK, S/T kinase, OsCRL4, OsHKL1, OsCDP","CHASE DOMAIN RECEPTOR-LIKE SERINE/THREONINE KINASE","CHASE domain receptor-like serine/threonine kinase, CHASE domain protein",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004872 - receptor activity, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance",null,"Os12g0454800","LOC_Os12g26940.1","Os02g0510200","Os03g0432100","Os08g0300300",0,1.2744942,null,"qGG-12-1(t) (GG)","qGG-12-1(t) (GG)","green rice percentage (QTL)-12-1(t)","green rice percentage (QTL)-12-1(t)",12," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0749500","LOC_Os03g53860",4.551239,"Os10g0370500","LOC_Os10g22520",0,1.3736,{"$nulls":10},"Os02g0623500","Os04g0397500","Os03g0100800","Os03g0100800",4.164438,3.1755283,null,"Os07g0524000",4.3924584,"Os04g0577000",-1.5380398,{"$nulls":29},"NYC3","nyc3, OsNYC3, PPH","NON-YELLOW COLORING 3","pheophytinase",6," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0009536 - plastid, GO:0009645 - response to low light intensity stimulus, GO:0010941 - regulation of cell death, GO:0050832 - defense response to fungus, GO:0080124 - pheophytinase activity, GO:0016787 - hydrolase activity, GO:0015996 - chlorophyll catabolic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000326 - leaf color, TO:0000605 - hydrogen peroxide content, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os06g0354700","LOC_Os06g24730.3, LOC_Os06g24730.2, LOC_Os06g24730.1",{"$nulls":3},"Os06g0275000",-1.3490849,-1.0695515,null,"GL1","gl1, NUDA/GL-1, NUDA/GL1, NUDA, GL-1, OsWOX3B, OsWOX2, OsWOX3, Os WOX3, WOX3B, WOX2, WOX3, LSY1, OsLSY1, DEP, OsDEP","GLABROUS LEAF AND HULL 1","glabrous leaf and hull1, glabrous leaf and hull 1, glabrous leaf and hull-1, WUSCHEL-related homeobox 3B, leaf lateral symmetry-1, LEAF LATERAL SYMMETRY1, DEPILOUS",5," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009955 - adaxial/abaxial pattern formation, GO:0007275 - multicellular organismal development, GO:0003700 - transcription factor activity, GO:0000079 - regulation of cyclin-dependent protein kinase activity, GO:0048366 - leaf development, GO:0030154 - cell differentiation, GO:0043565 - sequence-specific DNA binding, GO:0010090 - trichome morphogenesis, GO:0006351 - transcription, DNA-dependent","TO:0000417 - lemma and palea pubescence,  - palea pubescence, TO:0000655 - leaf development trait, TO:0000358 - female sterility, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000055 - leaf lamina pubescence","PO:0001050 - leaf development stage , PO:0009025 - vascular leaf , PO:0009062 - gynoecium , PO:0009037 - lemma , PO:0009038 - palea , PO:0020039 - leaf lamina ","Os05g0118700","LOC_Os05g02730.1",{"$nulls":6},"GLP8-3","OsGLP8-3, GER2","GERMIN-LIKE PROTEIN 8-3","Germin-like protein 8-3, germin-like protein 2",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0009607 - response to biotic stimulus, GO:0048046 - apoplast, GO:0002242 - defense response to parasitic plant","TO:0000444 - parasitic weed, TO:0000179 - biotic stress trait, TO:0000432 - temperature response trait","PO:0009010 - seed ","Os08g0189200","LOC_Os08g08970.1",{"$nulls":6},"CHT11","Cht11, PR3, OsCHT11","CHITINASE 11","Chitinase11, Chitinase 11, Pathogenesis related (PR)-3 chitinase 11, Pathogenesis related-3 chitinase 11, PR-3 chitinase 11",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0016998 - cell wall macromolecule catabolic process, GO:0006032 - chitin catabolic process, GO:0004568 - chitinase activity",null,null,"Os03g0132900","LOC_Os03g04060.1","Os07g0568700","Os02g0809800","Os02g0635000",0,1.2736211,null,"qHR-1-1(t) (HR)","qHR-1-1(t) (HR)","head rice grain (QTL)-1-1(t)","head rice grain (QTL)-1-1(t)",1," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os11g0530600","LOC_Os11g32650",4.57839,"Os10g0437700","LOC_Os10g30162",0,1.6509336,{"$nulls":10},"Os02g0744900","Os07g0510900","Os03g0368900","Os03g0368900",4.013238,7.180881,null,"Os10g0539600",4.3911285,"Os04g0476400",-1.5369649,{"$nulls":29},"NOL","nol, NOL1, OsNOL, OsNOL1","NYC1-LIKE","Non-Yellow Coloring 1 like, NYC1-like, \\Chlorophyll(ide) b reductase NOL, chloroplastic\\\", Protein NON-YELLOW COLORING 1-LIKE, Protein NYC1-LIKE, Short-chain dehydrogenase/reductase NOL\"",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0055114 - oxidation reduction, GO:0016491 - oxidoreductase activity, GO:0009536 - plastid, GO:0034256 - chlorophyll(ide) b reductase activity, GO:0010304 - PSII associated light-harvesting complex II catabolic process, GO:0015996 - chlorophyll catabolic process, GO:0008152 - metabolic process, GO:0009535 - chloroplast thylakoid membrane, GO:0005488 - binding","TO:0000326 - leaf color, TO:0000495 - chlorophyll content",null,"Os03g0654600","LOC_Os03g45194.1",{"$nulls":3},"Os03g0301200",0,-1.1215805,null,"WGL","wgl(t)*, wgl","SPIKELET WIDTH","spikelet width",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000149 - seed width","PO:0009082 - spikelet floret , PO:0009039 - glume ",{"$nulls":8},"GLP8-1","OsGLP8-1","GERMIN-LIKE PROTEIN 8-1","Germin-like protein 8-1",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding",null,null,"Os08g0188900","LOC_Os08g08920.1",{"$nulls":6},"CHT5","Cht5, OsChia4a, OsChitIVa, Chia4a, ChitIVa, CHIT3, OsCHIT3","CHITINASE 5","Chitinase5, Chitinase 5, Pathogenesis related (PR)-3 chitinase 5, Pathogenesis related-3 chitinase 5, PR-3 chitinase 5, Class IV chitinase a, Chitinase IVa, Endochitinase A",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0008061 - chitin binding, GO:0006952 - defense response, GO:0006032 - chitin catabolic process, GO:0004568 - chitinase activity, GO:0046688 - response to copper ion, GO:0016998 - cell wall macromolecule catabolic process","TO:0000021 - copper sensitivity",null,"Os04g0494100","LOC_Os04g41680.1","Os01g0136100","Os12g0568200","Os08g0167000",0,1.2633623,null,"qHR-2-1(t) (HR)","qHR-2-1(t) (HR)","head rice grain (QTL)-2-1(t)","head rice grain (QTL)-2-1(t)",3," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os03g0304800","LOC_Os03g19220",4.6029663,"Os10g0462900","LOC_Os10g32550",0,-1.9924326,{"$nulls":10},"Os03g0106400","Os03g0856700","Os09g0361500","Os09g0361500",3.678552,3.756293,null,"Os03g0819600",4.391084,"Os06g0226000",-1.5365504,{"$nulls":29},"HD3B","Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3, ELF3_chr.6, OsELF3.1, ELF3.1","HEADING DATE 3B","HEADING DATE 17, EARLINESS 7, EARLY FLOWERING 3-1, EARLY FLOWERING3.1, EARLY FLOWERING 3.1, ELF3 homolog 1, Heading date from Qingluzhan 11, EARLY FLOWERING3",6," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0009648 - photoperiodism, GO:0007623 - circadian rhythm, GO:0048573 - photoperiodism, flowering","TO:0000137 - days to heading, TO:0000229 - photoperiod sensitivity, TO:0000249 - leaf senescence, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os06g0142600","LOC_Os06g05060.1",{"$nulls":3},"Os08g0504700",0,-1.1219383,null,"APH","aph","APICULUS HAIRS","apiculus hairs",6," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000417 - lemma and palea pubescence,  - palea pubescence","PO:0006033 - paleal apiculus , PO:0009088 - seed coat ",{"$nulls":8},"GLUB4","GluB4, GluB-4, GluB-5, GluB5, GluB-4/5","GLUTELIN B4",null,2," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009279 - cell outer membrane, GO:0006952 - defense response, GO:0045735 - nutrient reservoir activity","TO:0002661 - seed maturation","PO:0006220 - central endosperm , PO:0005360 - aleurone layer ","Os02g0268300","LOC_Os02g16830.1",{"$nulls":6},"CHT8","Cht8, OsChia2a, Cht2, Rcht2, Chia2a, CHIT14, OsCHIT14, OsPR3","CHITINASE 8","Chitinase8, Chitinase 8, Pathogenesis related (PR)-3 chitinase 8, Pathogenesis related-3 chitinase 8, PR-3 chitinase 8, Class II chitinase a",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0004568 - chitinase activity, GO:0006032 - chitin catabolic process, GO:0016998 - cell wall macromolecule catabolic process","TO:0000175 - bacterial blight disease resistance, TO:0000031 - silicon sensitivity",null,"Os10g0542900","LOC_Os10g39680.1","Os01g0184100","Os11g0559200","Os06g0662200",2.9997795,1.2566763,null,"qHR-5-1(t) (HR)","qHR-5-1(t) (HR)","head rice grain (QTL)-5-1(t)","head rice grain (QTL)-5-1(t)",5," Character as QTL - Yield and productivity"]
[{"$nulls":6},"Os02g0657000","LOC_Os02g43970",4.613399,"Os10g0491000","LOC_Os10g34930",0,-1.8751928,{"$nulls":10},"Os03g0118600","Os09g0491100","Os07g0214900","Os07g0214900",3.4705398,4.0250535,null,"Os05g0469800",4.3882146,"Os01g0733200",-1.5364038,{"$nulls":29},"BT1-3","OsBT1-3, SLA","BRITTLE 1-3","Brittle-1-3, seedling leaf albino",6," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0005743 - mitochondrial inner membrane, GO:0022857 - transmembrane transporter activity, GO:0022891 - substrate-specific transmembrane transporter activity, GO:0006839 - mitochondrial transport, GO:0015853 - adenine transport, GO:0015292 - uniporter activity, GO:0009941 - chloroplast envelope, GO:0009507 - chloroplast, GO:0016021 - integral to membrane, GO:0009658 - chloroplast organization, GO:0005982 - starch metabolic process","TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os06g0602700","LOC_Os06g40050.1, LOC_Os06g40050.2",{"$nulls":3},"Os06g0354700",-2.6283875,-1.1361288,null,"MP2","mp2","MULTIPLE PISTIL 2","multiple pistil2, multiple pistil 2, multiple pistil-2",6," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009062 - gynoecium , PO:0009029 - stamen , PO:0009030 - carpel ",{"$nulls":8},"GLUB5","GluB5, GLU2.3","GLUTELIN B5","gluten 2.3",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009279 - cell outer membrane, GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0009791 - post-embryonic development, GO:0000003 - reproduction, GO:0009651 - response to salt stress, GO:0009415 - response to water, GO:0006952 - defense response","TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os02g0268100","LOC_Os02g16820.1",{"$nulls":6},"COW1","OsCOW1, oscow1, OsYUC8, YUC8, NAL7, OsNAL7, OsYUCCA8, YUCCA8, FMO, OsFMO(t), REIN7, YUC8/REIN7","CONSTITUTIVELY WILTED 1","CONSTITUTIVELY WILTED1, Constitutively wilted 1, NARROW LEAF7, NARROW LEAF 7, YUCCA-LIKE GENE 8, flavin monooxygenase, rice ethylene-insensitive 7",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048825 - cotyledon development, GO:0030104 - water homeostasis, GO:0009851 - auxin biosynthetic process, GO:0051607 - defense response to virus, GO:0010229 - inflorescence development, GO:0005829 - cytosol, GO:0047434 - indolepyruvate decarboxylase activity, GO:0022603 - regulation of anatomical structure morphogenesis, GO:0009911 - positive regulation of flower development, GO:0007275 - multicellular organismal development, GO:0005654 - nucleoplasm, GO:0009734 - auxin mediated signaling pathway, GO:0050661 - NADP or NADPH binding, GO:0050660 - FAD binding, GO:0004499 - flavin-containing monooxygenase activity, GO:0000139 - Golgi membrane","TO:0000148 - viral disease resistance, TO:0000492 - leaf shape","PO:0000025 - root tip , PO:0025034 - leaf , PO:0009047 - stem , PO:0020141 - stem node ","Os03g0162000","LOC_Os03g06654.2, LOC_Os03g06654.1","Os07g0258400","Os06g0247500","Os06g0140700",2.8959248,1.2395021,null,"LHS1","OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO, OsLHS1, OsLG3b, LG3b, qLGY3, LGY3, DLN80, OsDLN80","LEAFY HULL STERILE 1","MADS box gene1, leafy hull sterile1, leafy hull sterile 1, LEAFY HULL STERILE1, naked seed rice, over developed palea, MADS-box transcription factor 1, Protein LEAFY HULL STERILE 1, Protein SEPALLATA-like, abnormal floral organs, long grain 3b, DLN repressor 80, DLN motif protein 80, Oat-like rice",3," Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0042127 - regulation of cell proliferation, GO:0005515 - protein binding, GO:0005634 - nucleus, GO:0010093 - specification of floral organ identity, GO:0010582 - floral meristem determinacy, GO:0010076 - maintenance of floral meristem identity, GO:0009553 - embryo sac development, GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0048316 - seed development, GO:0001708 - cell fate specification, GO:0009908 - flower development, GO:0045449 - regulation of transcription, GO:0048437 - floral organ development, GO:0045165 - cell fate commitment, GO:0030154 - cell differentiation, GO:0003677 - DNA binding, GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0045595 - regulation of cell differentiation","TO:0001000 - glume cover, TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000437 - male sterility, TO:0006012 - carpel anatomy and morphology trait, TO:0000274 - floret anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000499 - flower anatomy and morphology trait, TO:0000436 - spikelet sterility, TO:0000344 - days to flower, TO:0000207 - plant height, TO:0006037 - carpel shape, TO:0006009 - lodicule anatomy and morphology trait, TO:0002659 - pistil number, TO:0006010 - lodicule number, TO:0000209 - palea number, TO:0000208 - lemma number, TO:0006029 - glume number, TO:0006038 - floral organ number, TO:0000592 - 1000-dehulled grain weight, TO:0000304 - seed thickness, TO:0000149 - seed width, TO:0000146 - seed length, TO:0000399 - grain thickness, TO:0000416 - embryosac abortion, TO:0000455 - seed set percent, TO:0000657 - spikelet anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000670 - floret number, TO:0000223 - pistil anatomy and morphology trait, TO:0000266 - chalky endosperm, TO:0000650 - lemma length, TO:0000225 - stamen number, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000397 - grain size, TO:0000377 - cooked grain elongation, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000622 - flower development trait, TO:0000245 - pollen free, TO:0000417 - lemma and palea pubescence","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009030 - carpel , PO:0009039 - glume , PO:0009046 - flower , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0001049 - lodicule development stage , PO:0001048 - palea development stage , PO:0001047 - lemma development stage , PO:0006000 - caryopsis hull , PO:0009062 - gynoecium , PO:0009029 - stamen , PO:0009010 - seed , PO:0007615 - flower development stage , PO:0009037 - lemma , PO:0009036 - lodicule , PO:0009038 - palea , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000229 - flower meristem ","Os03g0215400","LOC_Os03g11614.1"]
[{"$nulls":6},"Os02g0640700","LOC_Os02g42800",{"$f":"VLOOKUP(G323,AG:AH, 2,FALSE)","v":4.648108},"Os10g0510500","LOC_Os10g36703",0,-1.1871086,{"$nulls":10},"Os03g0146400","Os08g0105800","Os01g0293900","Os01g0293900",3.268673,4.1536126,null,"Os08g0201700",4.383181,"Os09g0520700",-1.5360321,{"$nulls":29},"EP2","ep2, EP2/DEP2/SRS1, SRS1/DEP2, DEP2, SRS1, CL7(t), OsRELA, RELA","ERECT PANICLE 2","erect panical 2, Erect panicle2, erect panicle2-1, erect panicle2-2, dense and erect panicle 2, small and round seed 1, cleistogamy 7, cleistogamy gene on chromosome 7, regulator of leaf angle",7," Vegetative organ - Leaf,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000557 - secondary branch number, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000472 - vascular bundle number, TO:0000339 - stem thickness, TO:0000040 - panicle length, TO:0000180 - spikelet fertility, TO:0000402 - grain width, TO:0000382 - 1000-seed weight, TO:0000051 - stem strength, TO:0002637 - leaf size, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000397 - grain size","PO:0009005 - root , PO:0020104 - leaf sheath , PO:0005020 - vascular bundle , PO:0009047 - stem , PO:0009082 - spikelet floret ","Os07g0616000","LOC_Os07g42410.1",{"$nulls":3},"Os03g0810100",0,-1.1375446,null,"DP1","dp1, pa, DP1/PAL1, PAL1, OsDP1","DEPRESSED PALEA 1","depressed palea1, depressed palea 1, depressed palea-1, DEPRESSED PALEA1, PALEALESS1, OsDEPRESSED PALEA1",6," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000484 - seed shape, TO:0000449 - grain yield per plant, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009082 - spikelet floret , PO:0009009 - plant embryo , PO:0009038 - palea ","Os06g0136900","LOC_Os06g04540.1",{"$nulls":6},"ETR4","PK3, OsPK3, OsETR4, OS-ETR4","ETHYLENE RESPONSE 4","subfamily I ethylene receptor",7," Seed - Physiological traits - Storage substances","GO:0005789 - endoplasmic reticulum membrane, GO:0000156 - two-component response regulator activity, GO:0000155 - two-component sensor activity, GO:0009723 - response to ethylene stimulus, GO:0048573 - photoperiodism, flowering, GO:0009873 - ethylene mediated signaling pathway, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000173 - ethylene sensitivity, TO:0000137 - days to heading, TO:0002616 - flowering time",null,"Os07g0259100","LOC_Os07g15540.1",{"$nulls":6},"HK3","OHK2, HK, OsHK3, Ohk, Crl2, Ohk2, OsHK3b, OsHK03","HISTIDINE KINASE 3","histidine kinase 3, His kinase 3",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009736 - cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0006979 - response to oxidative stress, GO:0004673 - protein histidine kinase activity, GO:0000156 - two-component response regulator activity, GO:0000155 - two-component sensor activity, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold","TO:0000167 - cytokinin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress",null,"Os01g0923700 ","LOC_Os01g69920.1, LOC_Os01g69920.2, LOC_Os01g69920.3","Os03g0235900","Os04g0654600","Os01g0190300",0,1.2362556,null,"RFL","RFL, OSL, FL, APO2, APO2/RFL, SSC, SSC/RFL/APO2, OsRFL, OsFL, OsAPO2, OsSSC","FLO-LFY HOMOLOG OF RICE","Rice LFY-like gene, Probable transcription factor FL, RICE FLORICAULA, ABERRANT PANICLE ORGANIZATION 2, RFL/ABERRANT PANICLE ORGANIZATION 2, SHORT and SOLID CULM, RICE FLORICAULA/LEAFY",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010223 - secondary shoot formation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0043067 - regulation of programmed cell death, GO:0045487 - gibberellin catabolic process, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0045449 - regulation of transcription, GO:0048573 - photoperiodism, flowering, GO:0010229 - inflorescence development, GO:0051510 - regulation of unidimensional cell growth, GO:0051302 - regulation of cell division, GO:0010073 - meristem maintenance, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling","TO:0002616 - flowering time, TO:0006032 - panicle size, TO:0001035 - stem width, TO:0000145 - internode length, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000050 - inflorescence branching, TO:0000621 - inflorescence development trait, TO:0000547 - primary branch number, TO:0000329 - tillering ability, TO:0002759 - grain number, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0000017 - vascular leaf primordium , PO:0006079 - shoot meristem , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage , PO:0000034 - vascular system ","Os04g0598300","LOC_Os04g51000.1"]
[{"$nulls":6},"Os02g0697400","LOC_Os02g46970",4.7170224,"Os10g0529300","LOC_Os10g38580",0,{"$f":"VLOOKUP(K324,H:I, 2,FALSE)","v":5.40127},{"$nulls":10},"Os03g0157900","Os08g0152300","Os07g0156200","Os07g0156200",3.268673,4.1536126,null,"Os03g0421800",4.3816485,"Os05g0442700",-1.5360001,{"$nulls":29},"LPS1","SDH2, SDHB, sdhB, RPS14, rps14, sdh2-1, SDH2-RPS14, OsLPS1, OsSDH2-1","LATE PREMATURE SENESCENCE 1","SUCCINATE:UBIQUINONE OXIDOREDUCTASE, mitochondrial succinate dehydrogenase subunit B, ribosomal protein S14, succinate dehydrogenase (iron-sulphur protein subunit), chimeric SDH2-RPS14",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion, GO:0006099 - tricarboxylic acid cycle, GO:0009055 - electron carrier activity, GO:0016491 - oxidoreductase activity, GO:0009658 - chloroplast organization, GO:0007005 - mitochondrion organization, GO:0000104 - succinate dehydrogenase activity, GO:0010150 - leaf senescence, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000249 - leaf senescence, TO:0000040 - panicle length, TO:0002715 - chloroplast development trait, TO:0000447 - filled grain number, TO:0000522 - stomatal conductance, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0000621 - inflorescence development trait, TO:0000639 - seed fertility, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content, TO:0006032 - panicle size, TO:0001015 - photosynthetic rate, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0009072 - plant ovary , PO:0000025 - root tip , PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os08g0120000","LOC_Os08g02640.1, LOC_Os08g02640.2, LOC_Os08g02640.3, LOC_Os08g02640.4, LOC_Os08g02640.5",{"$nulls":3},"Os01g0547600",-1.7720733,-1.1524473,null,"LP1","lp1","LONG PALEA 1","long palea1, long palea 1, long palea-1",7," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"TPS8","OsTPS8, OsTPS1, TPS1","TREHALOSE-6-PHOSPHATE SYNTHASE 8","trehalose-6-phosphate synthase 1",8," Biochemical character,  Seed,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0010431 - seed maturation, GO:0010182 - sugar mediated signaling, GO:0005992 - trehalose biosynthetic process","TO:0002661 - seed maturation, TO:0000333 - sugar content","PO:0007632 - seed maturation stage ","Os08g0445700","LOC_Os08g34580.1, LOC_Os08g34580.2",{"$nulls":6},"AHP1","OHP1, HPt, OsAHP1, Hpt2, Ohp1, OsHP2, OsHpt2, OsHPt2, OsHP02","HISTIDINE CONTAINING PHOSPHOTRANSMITTER 1","histidine containing phosphotransmitter, authentic His-containing phosphotransfer protein 1, Authentic Histidine Phosphotransfer protein 1",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0004871 - signal transducer activity, GO:0009736 - cytokinin mediated signaling, GO:0000160 - two-component signal transduction system (phosphorelay), GO:0009735 - response to cytokinin stimulus","TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000207 - plant height, TO:0000249 - leaf senescence, TO:0000346 - tiller number, TO:0000420 - fertility related trait, TO:0000227 - root length, TO:0000173 - ethylene sensitivity, TO:0000095 - osmotic response sensitivity",null,"Os08g0557700","LOC_Os08g44350.1","Os03g0170900","Os09g0474000","Os03g0855700",1.7672962,1.2234253,null,"BRD1","brd1, OsDWARF, DWARF, OsBR6ox, BR6ox, CYP85A1, CYP85A4, OsDWF, CYP85A1/OsDWARF, OsBRD1, OsCYP85A1","BRASSINOSTEROID-DEFICIENT DWARF 1","brassinosteroid-dependent1, brassinosteroid-dependent 1, brassinosteroid-deficient dwarf1, brassinosteroid-deficient dwarf 1, Cytochrome P450 85A1, C6-oxidase, BR-6-oxidase, Dwarf protein, cytochrome P450 CYP85A4, brassinosteroid deficient1, BR-deficient dwarf1, BR-deficient dwarf 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005506 - iron ion binding, GO:0080113 - regulation of seed growth, GO:0007275 - multicellular organismal development, GO:0009719 - response to endogenous stimulus, GO:0055114 - oxidation reduction, GO:0009647 - skotomorphogenesis, GO:0022900 - electron transport chain, GO:0016020 - membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007165 - signal transduction, GO:0016132 - brassinosteroid biosynthetic process, GO:0020037 - heme binding, GO:0001578 - microtubule bundle formation, GO:0009637 - response to blue light, GO:0016021 - integral to membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0010268 - brassinosteroid homeostasis, GO:0009753 - response to jasmonic acid stimulus, GO:0004497 - monooxygenase activity, GO:0009055 - electron carrier activity, GO:0060359 - response to ammonium ion","TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000642 - leaf sheath diameter, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000085 - leaf rolling, TO:0000370 - leaf width, TO:0000159 - blue light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000227 - root length, TO:0002676 - brassinosteroid content, TO:0000391 - seed size, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000492 - leaf shape, TO:0000145 - internode length","PO:0001031 - 4 root elongation stage ","Os03g0602300","LOC_Os03g40540.1"]
[{"$nulls":6},"Os01g0110200","LOC_Os01g02010",5.0858483,"Os10g0533500","LOC_Os10g38940",0,3.4932086,{"$nulls":10},"Os03g0337600","Os01g0672100","Os05g0134400","Os05g0134400",3.1733818,3.6408613,null,"Os04g0654600",4.376442,"Os12g0579450",-1.5359154,{"$nulls":29},"RIM1","ONAC054, ONAC54, NAC54, ONAC054alpha, ONAC054beta","RICE DWARF VIRUS MULTIPLICATION 1","NAC domain-containing protein 054, NAC domain-containing protein 54",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0003700 - transcription factor activity","TO:0000326 - leaf color, TO:0000447 - filled grain number, TO:0000148 - viral disease resistance, TO:0000173 - ethylene sensitivity, TO:0000316 - photosynthetic ability, TO:0000152 - panicle number, TO:0002667 - abscisic acid content, TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility, TO:0000227 - root length, TO:0000172 - jasmonic acid sensitivity","PO:0001054 - 4 leaf senescence stage ","Os03g0119966","LOC_Os03g02800.1",{"$nulls":3},"Os07g0262200",0,-1.1710991,null,"G1","g1 (lng), lng, g1, ELE, OsG1, G1/ELE, LSL2, OsLSL2","LONG STERILE LEMMAS 1","long sterile lemmas1, long sterile lemmas 1, long sterile lemmas-1, elongated empty glume, long sterile lemma/glume1, long sterile lemma 2",7," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010029 - regulation of seed germination, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009909 - regulation of flower development, GO:0009416 - response to light stimulus, GO:0009299 - mRNA transcription, GO:0048449 - floral organ formation","TO:0002726 - sterile lemma shape, TO:0000622 - flower development trait, TO:0000430 - germination rate, TO:0000657 - spikelet anatomy and morphology trait, TO:0020033 - glume length, TO:0000240 - sterile lemma length, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0139300","LOC_Os07g04670.1",{"$nulls":6},"SG1","OsSG1, Sg1","SHORT GRAIN 1","SHORT GRAIN1, Short grain 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0008285 - negative regulation of cell proliferation, GO:0048316 - seed development","TO:0000397 - grain size, TO:0000370 - leaf width, TO:0000734 - grain length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000326 - leaf color, TO:0002677 - brassinosteroid sensitivity, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage ","Os09g0459200","LOC_Os09g28520.1",{"$nulls":6},"AHP2","OHP2, HPt, OsAHP2 Hpt3, Ohp2, OsHP1, OsHpt3, OsHP01","HISTIDINE CONTAINING PHOSPHOTRANSMITTER 2","histidine containing phosphotransmitter, authentic His-containing phosphotransfer protein 2",9," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0004871 - signal transducer activity, GO:0009735 - response to cytokinin stimulus, GO:0009736 - cytokinin mediated signaling, GO:0000160 - two-component signal transduction system (phosphorelay), GO:0009723 - response to ethylene stimulus","TO:0000167 - cytokinin sensitivity, TO:0000420 - fertility related trait, TO:0000249 - leaf senescence, TO:0000173 - ethylene sensitivity, TO:0000207 - plant height, TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000656 - root development trait, TO:0000346 - tiller number",null,"Os09g0567400","LOC_Os09g39400.2, LOC_Os09g39400.1","Os01g0972200","Os05g0583600","Os01g0113200",1.5442066,1.2218553,null,"FST ","OsMADS29, MADS29, OsFST","FEMALE-STERILE ","MADS box gene29, MADS-box transcription factor 29",2," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity,  Other","GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0010600 - regulation of auxin biosynthetic process, GO:0010252 - auxin homeostasis, GO:0009960 - endosperm development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0048481 - ovule development, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009755 - hormone-mediated signaling, GO:0009790 - embryonic development","TO:0000620 - embryo development trait, TO:0000358 - female sterility, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0002672 - auxin content, TO:0000476 - growth hormone content, TO:0000163 - auxin sensitivity, TO:0000621 - inflorescence development trait","PO:0001002 - fruit development stage , PO:0007619 - ovule development stage , PO:0007633 - endosperm development stage , PO:0007631 - plant embryo stage , PO:0001083 - inflorescence development stage ","Os02g0170300","LOC_Os02g07430.1"]
[{"$nulls":6},"Os07g0567400","LOC_Os07g38000",5.170736,"Os10g0567000","LOC_Os10g41749",0,-1.4640685,{"$nulls":10},"Os03g0391400","Os07g0686600","Os04g0640600","Os04g0640600",3.16819,2.2150252,null,"Os10g0133500",4.369273,"Os11g0543100",-1.5350777,{"$nulls":29},"AOC","OsAOC, AOC1, OsAOC1, HB, CPM2","ALLENE OXIDE CYCLASE","allene oxide cyclase, coleoptile photomorphogenesis 2, hebiba, hebibaAOC",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009570 - chloroplast stroma, GO:0009535 - chloroplast thylakoid membrane, GO:0009620 - response to fungus, GO:0009695 - jasmonic acid biosynthetic process, GO:0016853 - isomerase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009941 - chloroplast envelope, GO:0005886 - plasma membrane, GO:0009269 - response to desiccation, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0010319 - stromule, GO:0046423 - allene-oxide cyclase activity","TO:0002668 - jasmonic acid content, TO:0000112 - disease resistance, TO:0001007 - coleoptile length, TO:0000544 - mesocotyl length, TO:0000074 - blast disease","PO:0009051 - spikelet ","Os03g0438100","LOC_Os03g32314.1",{"$nulls":3},"Os03g0266200",-1.7446078,-1.1778779,null,"SLG","slg, Rurm1, Urm1","SLENDER GLUME","slender glume, slender-glume, rice ubiquitin-related modifier-1, ubiquitin-related modifier-1",7," Reproductive organ - Spikelet, flower, glume, awn","GO:0034227 - tRNA thio-modification, GO:0005737 - cytoplasm, GO:0009826 - unidimensional cell growth","TO:0000149 - seed width, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000207 - plant height, TO:0000304 - seed thickness, TO:0000145 - internode length","PO:0009039 - glume , PO:0009047 - stem , PO:0020142 - stem internode ","Os07g0466300","LOC_Os07g28280.1",{"$nulls":6},"SSG6","OsACS6, ACS6","SUBSTANDARD STARCH GRAIN6","substandard starch grain 6, ACC SYNTHASE 6",6," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances","GO:0009658 - chloroplast organization, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0033097 - amyloplast membrane, GO:0009693 - ethylene biosynthetic process","TO:0000402 - grain width, TO:0000266 - chalky endosperm, TO:0000397 - grain size, TO:0002655 - starch grain size, TO:0002715 - chloroplast development trait, TO:0002658 - starch grain synthesis, TO:0000590 - grain weight","PO:0009089 - endosperm , PO:0009005 - root ","Os06g0130400","LOC_Os06g03990.1",{"$nulls":6},"RR2","rr2, Osrr2, OsRR2, Rra10, OsRRA10","A-TYPE RESPONSE REGULATOR 2","A-TYPE response regulator 2, Type A response regulator 2, A-type RR 10",2," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0000160 - two-component signal transduction system (phosphorelay), GO:0045449 - regulation of transcription, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0000156 - two-component response regulator activity, GO:0048364 - root development, GO:0009736 - cytokinin mediated signaling, GO:0070482 - response to oxygen levels","TO:0000015 - oxygen sensitivity, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity","PO:0007504 - crown root primordium formation stage ","Os02g0557800","LOC_Os02g35180.1","Os12g0274700","Os09g0262000","Os05g0129000",2.0921073,1.2048731,null,"PAP2","MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2, PAP2/OsMADS34, OsMADS34/PAP2, OsMADS19","PANICLE PHYTOMER2","MADS box gene34, MADS-box transcription factor 34, panicle phytomer 2",3," Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0010228 - vegetative to reproductive phase transition, GO:0043565 - sequence-specific DNA binding, GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003006 - reproductive developmental process","TO:0000358 - female sterility, TO:0002759 - grain number, TO:0000621 - inflorescence development trait, TO:0002726 - sterile lemma shape, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os03g0753100","LOC_Os03g54170.1"]
[{"$nulls":6},"Os10g0111700","LOC_Os10g02260",5.1882243,"Os10g0580400","LOC_Os10g42960",0,-2.238878,{"$nulls":10},"Os03g0563300","Os11g0184300","Os05g0455700","Os05g0455700",3.132274,3.3997002,null,"Os04g0676400",4.3668,"Os02g0706500",-1.5348808,{"$nulls":29},"BU1","ILI4, OsILI4, OsBU1, BU1/ILI4, OsbHLH172, bHLH172","BRASSINOSTEROID UPREGULATED 1","BRASSINOSTEROID UPREGULATED1, Increased Leaf Inclination4, BR upregulated 1, basic helix-loop-helix protein 172",6," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0005737 - cytoplasm, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0040008 - regulation of growth, GO:0046983 - protein dimerization activity, GO:0009723 - response to ethylene stimulus","TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002677 - brassinosteroid sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000172 - jasmonic acid sensitivity, TO:0000734 - grain length, TO:0000173 - ethylene sensitivity","PO:0005052 - plant callus ","Os06g0226500","LOC_Os06g12210.1",{"$nulls":3},"Os10g0419400",0,-1.2983583,null,"DP","dp(t)*, dp3, dp","DEPRESSED PALEA","depressed palea, depressed palea-3",9," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000484 - seed shape, TO:0000436 - spikelet sterility","PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009038 - palea ",{"$nulls":8},"GA2OX8","OsGA2ox8","GIBBERELLIN 2-OXIDASE 8","gibberellin 2-beta-dioxygenase 8",5," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009845 - seed germination, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0016020 - membrane, GO:0048364 - root development, GO:0010336 - gibberellic acid homeostasis, GO:0045487 - gibberellin catabolic process, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009962 - regulation of flavonoid biosynthetic process, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0009685 - gibberellin metabolic process","TO:0000615 - abscisic acid sensitivity, TO:0000340 - total soluble sugar content, TO:0000163 - auxin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0002675 - gibberellic acid content, TO:0000227 - root length, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress, TO:0000166 - gibberellic acid sensitivity, TO:0000152 - panicle number, TO:0000656 - root development trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000576 - stem length","PO:0007520 - root development stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os05g0560900","LOC_Os05g48700.1",{"$nulls":6},"RR4","rr4, OsRR4, Rra3, OsRRA3","A-TYPE RESPONSE REGULATOR 4","A-TYPE response regulator 4, Type A response regulator 4, A-type RR 3",1," Tolerance and resistance - Stress tolerance","GO:0000160 - two-component signal transduction system (phosphorelay), GO:0000156 - two-component response regulator activity, GO:0009733 - response to auxin stimulus, GO:0045449 - regulation of transcription, GO:0009736 - cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity",null,"Os01g0952500","LOC_Os01g72330.1","Os01g0734000","Os05g0205800","Os07g0411200",0,1.1983309,null,"GNP1","GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2, OsGA20ox2, OsGA20ox-1, GA20ox1, OsGNP1","GRAIN NUMBER PER PANICLE 1","GIBBERELLIN 20-OXIDASE 1, rice GA 20-oxidase1, GA 20-oxidase1, Gibberellin 20 oxidase 1, Gibberellin C-20 oxidase 1, GA 20-oxidase 1, GA20 oxidase-1, GA 20-oxidase 1, GA20 oxidase, Gibberellin C-20 oxidase, Grain Number per Panicle1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009686 - gibberellin biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0006970 - response to osmotic stress, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0055114 - oxidation reduction, GO:0010336 - gibberellic acid homeostasis","TO:0000397 - grain size, TO:0000291 - carbohydrate content, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000599 - enzyme activity, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000095 - osmotic response sensitivity, TO:0000357 - growth and development trait, TO:0000455 - seed set percent, TO:0000396 - grain yield","PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem ","Os03g0856700","LOC_Os03g63970.1"]
[{"$nulls":6},"Os03g0118600","LOC_Os03g02690",5.2110105,"Os11g0181700","LOC_Os11g07922",0,3.2697775,{"$nulls":10},"Os03g0679700","Os07g0670300","Os06g0695500","Os06g0695500",3.074114,2.9345798,null,"Os04g0233400",4.3566394,"Os12g0527700",-1.533811,{"$nulls":29},"COE1","coe1","COMMISSURAL VEIN EXCESSIVE1","commissural vein excessive1",8," Vegetative organ - Leaf",{"$nulls":3},"Os08g0442700","LOC_Os08g34380.1, LOC_Os08g34380.2",{"$nulls":3},"Os02g0683500",0,-1.3406903,null,"DP2","dp2","DEPRESSED PALEA 2","depressed palea2, depressed palea 2, depressed palea-2",9," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000499 - flower anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000484 - seed shape","PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0009038 - palea ",{"$nulls":8},"SWEET4","OsSWEET4","SWEET4",null,2," Biochemical character,  Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0008643 - carbohydrate transport, GO:0015758 - glucose transport, GO:0008645 - hexose transport, GO:0009960 - endosperm development, GO:0051119 - sugar transmembrane transporter activity, GO:0009749 - response to glucose stimulus, GO:0034219 - carbohydrate transmembrane transport, GO:0016021 - integral to membrane, GO:0005887 - integral to plasma membrane, GO:0010150 - leaf senescence, GO:0015757 - galactose transport, GO:0009739 - response to gibberellin stimulus","TO:0000167 - cytokinin sensitivity, TO:0000333 - sugar content, TO:0000166 - gibberellic acid sensitivity, TO:0000249 - leaf senescence, TO:0000100 - shrunken endosperm, TO:0000163 - auxin sensitivity, TO:0002661 - seed maturation","PO:0007633 - endosperm development stage , PO:0001054 - 4 leaf senescence stage , PO:0025196 - basal endosperm transfer layer ","Os02g0301100","LOC_Os02g19820.1",{"$nulls":6},"SPL17","spl17","SPOTTED LEAF 17","spotted leaf 17",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os06g0659100","Os04g0460600","Os01g0770500",0,1.1925329,null,"AHA7","OSA7, OsA7, osAHA7, AHA7, PAA-Hwa","H+-ATPASE 7","plasma membrane H+-ATPase 7, PM H+-ATPase 7, plasma membrane H+ P-Type ATPase 7, panicle apical abortion-h",4," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046872 - metal ion binding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0060359 - response to ammonium ion, GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism, GO:0010167 - response to nitrate, GO:0010119 - regulation of stomatal movement, GO:0006754 - ATP biosynthetic process, GO:0016021 - integral to membrane, GO:0005773 - vacuole, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000371 - yield trait","PO:0025034 - leaf , PO:0000025 - root tip ","Os04g0656100","LOC_Os04g56160.1, LOC_Os04g56160.2, LOC_Os04g56160.3"]
[{"$nulls":6},"Os05g0589400","LOC_Os05g51160",5.3580303,"Os11g0454000","LOC_Os11g26760",0,2.6712487,{"$nulls":10},"Os03g0712800","Os01g0941800","Os05g0132100","Os05g0132100",3.055768,2.0293887,null,"Os03g0259001",4.353885,"Os04g0464966",-1.5327772,{"$nulls":29},"CLF","OsSET24, SDG711, EZ1, OsCLF, OsSDG711","CURLY LEAF","SET protein 24, polycomb protein EZ1, SET DOMAIN GROUP 711",6," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010228 - vegetative to reproductive phase transition, GO:0005982 - starch metabolic process, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0031519 - PcG protein complex, GO:0016571 - histone methylation, GO:0009965 - leaf morphogenesis, GO:0009790 - embryonic development, GO:0051567 - histone H3-K9 methylation, GO:0045857 - negative regulation of molecular function, epigenetic, GO:0031047 - gene silencing by RNA, GO:0009294 - DNA mediated transformation, GO:0003700 - transcription factor activity, GO:0006306 - DNA methylation, GO:0010048 - vernalization response, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0048574 - long-day photoperiodism, flowering, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0003677 - DNA binding, GO:0003727 - single-stranded RNA binding, GO:0006349 - genetic imprinting","TO:0006032 - panicle size, TO:0002616 - flowering time, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000391 - seed size","PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem , PO:0009089 - endosperm , PO:0020056 - tegmen ","Os06g0275500","LOC_Os06g16390.1",{"$nulls":3},"Os04g0665600",0,-1.3667952,null,"SHL2","shl2, SHL2, sh2, OsRDR6, RDR6","SHOOTLESS 2","shootless 2, shootless-2, Probable RNA-dependent RNA polymerase SHL2, Protein SHOOTLESS 2, SHOOTLESS2, RNA-dependent RNA polymerase 6, rod-like lemma",1," Vegetative organ - Shoot apical meristem(SAM),  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006306 - DNA methylation, GO:0042138 - meiotic DNA double-strand break formation, GO:0006950 - response to stress, GO:0009266 - response to temperature stimulus, GO:0003968 - RNA-directed RNA polymerase activity, GO:0009737 - response to abscisic acid stimulus, GO:0003723 - RNA binding, GO:0010492 - maintenance of shoot apical meristem identity, GO:0051607 - defense response to virus, GO:0031047 - gene silencing by RNA, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development, GO:0030422 - production of siRNA involved in RNA interference, GO:0016246 - RNA interference, GO:0005739 - mitochondrion","TO:0000485 - sterility related trait, TO:0002718 - awn anatomy and morphology trait, TO:0000615 - abscisic acid sensitivity, TO:0000274 - floret anatomy and morphology trait, TO:0000432 - temperature response trait, TO:0000064 - embryo related trait, TO:0000164 - stress trait, TO:0000148 - viral disease resistance","PO:0009009 - plant embryo , PO:0020144 - apical meristem ","Os01g0527600","LOC_Os01g34350.1",{"$nulls":6},"SWEET15","OsSWEET15","SWEET15",null,2," Biochemical character,  Seed - Morphological traits - Endosperm","GO:0010431 - seed maturation, GO:0010150 - leaf senescence, GO:0005887 - integral to plasma membrane, GO:0051119 - sugar transmembrane transporter activity, GO:0008643 - carbohydrate transport, GO:0015757 - galactose transport, GO:0016021 - integral to membrane, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009960 - endosperm development, GO:0034219 - carbohydrate transmembrane transport, GO:0009915 - phloem loading","TO:0000696 - starch content, TO:0000166 - gibberellic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0002661 - seed maturation, TO:0000249 - leaf senescence, TO:0000575 - endosperm related trait","PO:0005360 - aleurone layer , PO:0008006 - nucellar epidermis , PO:0008007 - nucellar projection , PO:0020020 - nucellus , PO:0007632 - seed maturation stage , PO:0001054 - 4 leaf senescence stage ","Os02g0513100","LOC_Os02g30910.1",{"$nulls":6},"SPL18","Spl18, OsAT1","SPOTTED LEAF 18","spotted leaf 18",10," Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups",null,null,"Os10g0195600","LOC_Os10g11980.1","Os01g0225600","Os06g0546500","Os08g0424500",0,1.1904254,null,"PDCD5","OsPDCD5","PROGRAMMED CELL DEATH 5","programmed cell death 5",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0012501 - programmed cell death, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0010600 - regulation of auxin biosynthetic process, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0003677 - DNA binding, GO:0009691 - cytokinin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0009740 - gibberellic acid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0009926 - auxin polar transport","TO:0002672 - auxin content, TO:0002660 - cytokinin content, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0002675 - gibberellic acid content, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000145 - internode length","PO:0009066 - anther , PO:0009039 - glume , PO:0009047 - stem , PO:0020142 - stem internode , PO:0025034 - leaf , PO:0005020 - vascular bundle , PO:0009005 - root ","Os05g0547850","LOC_Os05g47446.1, LOC_Os05g47446.2"]
[{"$nulls":6},"Os10g0529300","LOC_Os10g38580",5.40127,"Os11g0461000","LOC_Os11g27329",0,1.9769455,{"$nulls":10},"Os03g0720300","Os10g0577500","Os02g0533300","Os02g0533300",3.0543835,2.5680068,null,"Os07g0194500",4.3532352,"Os01g0222900",-1.5310451,{"$nulls":29},"WFP","OsSPL14, SPL14, IPA1, WFP/IPA1, OsSPL14/WFP/IPA1, OsIPA1, IPA1/OsSPL14","WEALTHY FARMER'S PANICLE","IDEAL PLANT ARCHITECTURE 1, Ideal Plant Architecture 1, Ideal Plant Architecture1, Squamosa promoter-binding-like protein 14, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14, Squamosa promoter binding protein like-14, IDEAL PLANT ARCHITECTURE1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0010050 - vegetative phase change, GO:0006350 - transcription, GO:0009607 - response to biotic stimulus, GO:0010187 - negative regulation of seed germination, GO:0005982 - starch metabolic process, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0048366 - leaf development, GO:0003677 - DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0045449 - regulation of transcription, GO:0009755 - hormone-mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process","TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000017 - anatomy and morphology related trait, TO:0000547 - primary branch number, TO:0000357 - growth and development trait, TO:0000011 - nitrogen sensitivity, TO:0002689 - leaf sheath length, TO:0000621 - inflorescence development trait, TO:0000340 - total soluble sugar content, TO:0000653 - seed development trait, TO:0000179 - biotic stress trait, TO:0000447 - filled grain number, TO:0000166 - gibberellic acid sensitivity, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000455 - seed set percent, TO:0000175 - bacterial blight disease resistance, TO:0000152 - panicle number, TO:0000135 - leaf length, TO:0002759 - grain number","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007057 - 0 seed germination stage ","Os08g0509600","LOC_Os08g39890.1",{"$nulls":3},"Os01g0862600",0,-1.4497062,null,"AN5","An5(t), an5, An5(t)*","AWN 5","Awn-5, awn-5",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development, GO:0030154 - cell differentiation","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"YUCCA11","OsYUCCA11, OsYUC11, YUC11","YUCCA-LIKE GENE 11",null,12," Biochemical character,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances","GO:0009851 - auxin biosynthetic process, GO:0010431 - seed maturation","TO:0000696 - starch content, TO:0002672 - auxin content, TO:0002661 - seed maturation, TO:0000397 - grain size","PO:0007632 - seed maturation stage , PO:0009089 - endosperm ","Os12g0189500","LOC_Os12g08780.1",{"$nulls":6},"SPL19","spl19","SPOTTED LEAF 19","spotted leaf 19",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os09g0451000","Os05g0140100","Os07g0247100",0,1.180143,null,"LCRN1","OsSPL3, SPL3","LOWER CROWN ROOT NUMBER 1","Squamosa promoter-binding-like protein 3, SQUAMOSA Promoter-Binding Protein-Like 3, lower crown root number1",2," Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0010050 - vegetative phase change, GO:0008270 - zinc ion binding, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0048364 - root development, GO:0003677 - DNA binding, GO:0045449 - regulation of transcription","TO:0001013 - lateral root number, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000346 - tiller number","PO:0020127 - primary root , PO:0025197 - stele , PO:0000252 - endodermis , PO:0005427 - sclerenchyma , PO:0020123 - root cap , PO:0000025 - root tip , PO:0005679 - epidermis , PO:0005772 - exodermis ","Os02g0139400","LOC_Os02g04680.2, LOC_Os02g04680.1"]
[{"$nulls":6},"Os07g0287400","LOC_Os07g18750",5.622683,"Os11g0525600","LOC_Os11g32260",0,2.0368564,{"$nulls":10},"Os03g0738400","Os07g0567400","Os12g0482700","Os12g0482700",3.0479543,2.2604835,null,"Os05g0563000",4.3473687,"Os07g0209000",-1.5298886,{"$nulls":29},"qFLL9","qFLL9","FLAG LEAF LENGTH 9",null,9," Vegetative organ - Leaf,  Character as QTL - Plant growth activity",{"$nulls":8},"Os04g0556500",-1.6177063,-1.454739,null,"LMX","lmx*, lmx","LONG LEMMA","long lemma",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009037 - lemma , PO:0009038 - palea ",{"$nulls":8},"YUCCA12","OsYUCCA12, OsYUC12, YUC12","YUCCA-LIKE GENE 12",null,2," Biochemical character,  Seed - Morphological traits - Endosperm","GO:0048316 - seed development, GO:0050660 - FAD binding, GO:0050661 - NADP or NADPH binding, GO:0016491 - oxidoreductase activity, GO:0009960 - endosperm development","TO:0000653 - seed development trait","PO:0009089 - endosperm , PO:0001170 - seed development stage , PO:0007633 - endosperm development stage ","Os02g0272200","LOC_Os02g17230.1",{"$nulls":6},"SPL20","spl20","SPOTTED LEAF 20","spotted leaf 20",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os08g0504700","Os02g0723400","Os12g0563200",0,1.1762419,null,"SPL17","OsSPL17","RICE SQUAMOSA PROMOTER-BINDING-LIKE 17","Squamosa promoter-binding-like protein 17",9," Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0046872 - metal ion binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0010050 - vegetative phase change, GO:0045449 - regulation of transcription","TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000357 - growth and development trait",null,"Os09g0491532","LOC_Os09g31438.1"]
[{"$nulls":6},"Os07g0510500","LOC_Os07g32630",5.8879046,"Os11g0530600","LOC_Os11g32650",0,4.57839,{"$nulls":10},"Os03g0781400","Os07g0468100","Os01g0279100","Os01g0279100",2.9026222,4.379773,null,"Os06g0707300",4.3381257,"Os04g0643100",-1.5294367,{"$nulls":29},"EP3","EP3/LP, LP, OsLP, OsFbox076, OsFbox76, Os_F0106, OsEP3","ERECT PANICLE 3","LARGER PANICLE, F-box protein 76",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0048513 - organ development, GO:0048437 - floral organ development, GO:0048316 - seed development, GO:0005737 - cytoplasm, GO:0009908 - flower development, GO:0010118 - stomatal movement, GO:0009760 - C4 photosynthesis, GO:0010052 - guard cell differentiation, GO:0005634 - nucleus","TO:0000391 - seed size, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0006029 - glume number, TO:0000225 - stamen number, TO:0002768 - spikelet length, TO:0000564 - spikelet width, TO:0000371 - yield trait, TO:0000269 - 100-seed weight, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000625 - spikelet density, TO:0000531 - anther length, TO:0006013 - carpel number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0006022 - floral organ development trait, TO:0000370 - leaf width, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0002600 - flower organ size, TO:0000397 - grain size, TO:0000357 - growth and development trait, TO:0006038 - floral organ number, TO:0000622 - flower development trait, TO:0000421 - pollen fertility","PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0006036 - root epidermis , PO:0020123 - root cap , PO:0009013 - portion of meristem tissue , PO:0020127 - primary root , PO:0009046 - flower , PO:0009010 - seed , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0025585 - floral organ formation stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage ","Os02g0260200","LOC_Os02g15950.1",{"$nulls":3},"Os07g0209000",-1.8521515,-1.5298886,null,"PDC3","pdc3*, pdc3, OsPDC3, OsSTA202","PYRUVATE DECARBOXYLASE 3","pyruvate decarboxylase-3, pyruvate decarboxylase 3, Pyruvate decarboxylase isozyme 3",7," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006066 - alcohol metabolic process, GO:0000287 - magnesium ion binding, GO:0004737 - pyruvate decarboxylase activity, GO:0030976 - thiamin pyrophosphate binding",null,"PO:0009066 - anther , PO:0025281 - pollen , PO:0009049 - inflorescence ","Os07g0693100","LOC_Os07g49250.1",{"$nulls":6},"SAUR33","OsSAUR33","SMALL AUXIN-UP RNA 33","Small auxin-up RNA 33",8," Seed - Physiological traits,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:0009845 - seed germination, GO:0010182 - sugar mediated signaling","TO:0000300 - glucose content, TO:0000333 - sugar content, TO:0000340 - total soluble sugar content, TO:0000430 - germination rate, TO:0000259 - heat tolerance","PO:0020142 - stem internode , PO:0009005 - root , PO:0009010 - seed , PO:0007022 - seed imbibition stage , PO:0007057 - 0 seed germination stage ","Os08g0452500","LOC_Os08g35110.1",{"$nulls":6},"SPL21","spl21","SPOTTED LEAF 21","spotted leaf 21",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os03g0667500","Os05g0518800","Os09g0104200",0,1.1544582,null,"SPL18","OsSPL18","RICE SQUAMOSA PROMOTER-BINDING-LIKE 18","Squamosa promoter-binding-like protein 18",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0046872 - metal ion binding, GO:0048316 - seed development","TO:0002759 - grain number, TO:0000653 - seed development trait, TO:0000399 - grain thickness, TO:0000040 - panicle length, TO:0000149 - seed width, TO:0000590 - grain weight, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os09g0507100","LOC_Os09g32944.1"]
[{"$nulls":6},"Os05g0515600","LOC_Os05g43940",5.9088807,"Os11g0621400","LOC_Os11g40600",0,{"$error":"#N/A"},{"$nulls":10},"Os03g0794500","Os06g0109200","Os02g0113200","Os02g0113200",2.7889576,3.5112286,null,"Os03g0831700",4.3343883,"Os07g0408100",-1.52917,{"$nulls":29},"SCR1","OsSCR1, OsSCR, OsGRAS-41, OsGRAS41, GRAS-41, GRAS41","SCARECROW 1","GRAS protein 41",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0010374 - stomatal complex development, GO:0010440 - stomatal lineage progression","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000566 - stomatal frequency",null,"Os11g0124300","LOC_Os11g03110.1",{"$nulls":3},"Os04g0668900",0,-1.6065053,null,"BIF2","bif2, Osbif2, OsBIF2, OsPID, PID","BARREN INFLORESCENCE 2","barren inflorescence2, barren inflorescence2-like serine/threonine protein kinase, rice ortholog of PINOID, OsPINOID, PINOID",12," Reproductive organ - Inflorescence,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048367 - shoot development, GO:0048766 - root hair initiation, GO:0009908 - flower development, GO:0009734 - auxin mediated signaling pathway, GO:0004674 - protein serine/threonine kinase activity, GO:0035266 - meristem growth, GO:0005886 - plasma membrane, GO:0009926 - auxin polar transport, GO:0009986 - cell surface, GO:0048481 - ovule development, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009958 - positive gravitropism, GO:0009555 - pollen development, GO:0010622 - specification of ovule identity, GO:0048479 - style development, GO:0010076 - maintenance of floral meristem identity, GO:0048480 - stigma development, GO:0005524 - ATP binding, GO:0048767 - root hair elongation, GO:0048825 - cotyledon development, GO:0048364 - root development, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0006010 - lodicule number, TO:0000225 - stamen number, TO:0000485 - sterility related trait, TO:0000214 - anther shape","PO:0007619 - ovule development stage ","Os12g0614600","LOC_Os12g42020.1",{"$nulls":6},"_","CysR14","_","cysteine-rich 14kDa prolamin",null," Seed - Physiological traits - Storage substances",{"$nulls":11},"SPL22","spl22","SPOTTED LEAF 22","spotted leaf 22",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os03g0794500","Os11g0112000","Os02g0716500",0,1.1461989,null,"SAMS1","OsSAMS1, OS-SAMS1, OsSAMS, SAM, SAMS","S-ADENOSYL-L-METHIONINE SYNTHETASE 1","S-Adenosyl-l-methionine synthetase 1, S-adenosyl methionine synthetase, S-adenosylmethionine synthetase 1, SAM synthase",5," Biochemical character,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0005618 - cell wall, GO:0010364 - regulation of ethylene biosynthetic process, GO:0046872 - metal ion binding, GO:0009873 - ethylene mediated signaling pathway, GO:0005524 - ATP binding, GO:0005730 - nucleolus, GO:0006730 - one-carbon metabolic process, GO:0009809 - lignin biosynthetic process, GO:0009409 - response to cold, GO:0015948 - methanogenesis, GO:0006556 - S-adenosylmethionine biosynthetic process, GO:0009753 - response to jasmonic acid stimulus, GO:0005886 - plasma membrane, GO:0051607 - defense response to virus, GO:0006555 - methionine metabolic process, GO:0004478 - methionine adenosyltransferase activity, GO:0005737 - cytoplasm","TO:0000148 - viral disease resistance, TO:0002759 - grain number, TO:0000476 - growth hormone content, TO:0000172 - jasmonic acid sensitivity, TO:0000249 - leaf senescence, TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000391 - seed size",null,"Os05g0135700","LOC_Os05g04510.2, LOC_Os05g04510.1"]
[{"$nulls":6},"Os03g0243900","LOC_Os03g14030",5.939701,"Os11g0683500","LOC_Os11g45710",0,3.5710804,{"$nulls":10},"Os03g0797500","Os03g0102700","Os04g0608100","Os04g0608100",2.6313894,1.6692061,null,"Os08g0519300",4.332292,"Os04g0530200",-1.5283669,{"$nulls":29},"BZR1","OsBZR1, Os BZR1","BRASSINAZOLE RESISTANT 1","BRASSINAZOLE-RESISTANT1",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0080006 - internode patterning, GO:0043565 - sequence-specific DNA binding, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0009753 - response to jasmonic acid stimulus, GO:0009755 - hormone-mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0040008 - regulation of growth, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0005773 - vacuole, GO:0009741 - response to brassinosteroid stimulus, GO:0005737 - cytoplasm","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000329 - tillering ability, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000615 - abscisic acid sensitivity, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0002688 - leaf lamina joint bending","PO:0025034 - leaf , PO:0000034 - vascular system , PO:0000055 - bud ","Os07g0580500","LOC_Os07g39220.1",{"$nulls":3},"Os03g0146400",-2.0158217,-1.6110601,null,"GH3-8","OsGH3-8, OsMGH3, OsGH3.8, GH3.8, OsGH3-2","GH3-8",null,7," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0016874 - ligase activity, GO:0009908 - flower development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009852 - auxin catabolic process, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0006955 - immune response, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000020 - black streak dwarf virus resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0002672 - auxin content, TO:0000622 - flower development trait, TO:0000172 - jasmonic acid sensitivity","PO:0009066 - anther , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0007615 - flower development stage ","Os07g0592600","LOC_Os07g40290.1",{"$nulls":6},"_","CysR16","_","cysteine-rich 16kDa prolamin",null," Seed - Physiological traits - Storage substances",{"$nulls":11},"SPL23","spl23","SPOTTED LEAF 23","spotted leaf 23",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os04g0457000","Os05g0206000","Os09g0433600",1.6926078,1.1256065,null,"Y37","NAC11, ONAC011, ONAC11, OMTN4, OsY37, OsY37N, OsY37I, OsNAC1, DLN172, OsDLN172","YELLOW 37","NAC domain-containing protein 011, NAC domain-containing protein 11, miR164-targeted NAC4, Oryza miR164-targeted NAC4, Yellow37, Yellow 37, DLN repressor 172, DLN motif protein 172",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009651 - response to salt stress, GO:0010942 - positive regulation of cell death, GO:0055072 - iron ion homeostasis, GO:0003677 - DNA binding, GO:0048573 - photoperiodism, flowering, GO:0010150 - leaf senescence, GO:0006995 - cellular response to nitrogen starvation, GO:0006355 - regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance, TO:0000495 - chlorophyll content, TO:0000224 - iron sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000326 - leaf color, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0009005 - root ","Os06g0675600","LOC_Os06g46270.1"]
[{"$nulls":6},"Os05g0550300","LOC_Os05g47700",6.0061736,"Os12g0113500","LOC_Os12g02200",0,2.4671364,{"$nulls":10},"Os03g0826500","Os05g0292800","Os09g0345700","Os09g0345700",2.6159317,1.191276,null,"Os08g0248100",4.3260255,"Os03g0213100",-1.5263834,{"$nulls":29},"GH3-2","OsGH3-2, OsGH3.2, GH3.2","GRETCHENHAGEN 3-2","OsGRETCHENHAGEN3-2, GRETCHENHAGEN3-2, GRETCHEN HAGEN3-2",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits,  Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009683 - indoleacetic acid metabolic process, GO:0010252 - auxin homeostasis, GO:0005737 - cytoplasm, GO:0016881 - acid-amino acid ligase activity, GO:0009416 - response to light stimulus, GO:0009733 - response to auxin stimulus, GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0051607 - defense response to virus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0002667 - abscisic acid content, TO:0000345 - seed viability, TO:0000435 - seed longevity, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000135 - leaf length, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root , PO:0009010 - seed , PO:0009066 - anther , PO:0009049 - inflorescence ","Os01g0764800","LOC_Os01g55940.1",{"$nulls":3},"Os02g0540700",-1.5451984,-1.6222826,null,"CIPK05","OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.2","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5","CBL-interacting protein kinase 5, Sucrose nonfermenting-1-related protein kinase 3.2",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006468 - protein amino acid phosphorylation, GO:0030145 - manganese ion binding, GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009413 - response to flooding, GO:0007165 - signal transduction, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000114 - flooding related trait","PO:0009066 - anther ","Os01g0206700","LOC_Os01g10890.1",{"$nulls":6},"PDIL1-1","OsPDIL1;1, PDIL1;1, PDIL 1-1, PDI, OsPDIL1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1;1, protein disulfide-isomerase, PDI-like protein 1-1, Protein Disulfide Isomerase Like 1-1",11," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006662 - glycerol ether metabolic process, GO:0009055 - electron carrier activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009651 - response to salt stress, GO:0045454 - cell redox homeostasis, GO:0009408 - response to heat, GO:0055122 - response to very low light intensity stimulus, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0034975 - protein folding in endoplasmic reticulum, GO:0009409 - response to cold, GO:0046689 - response to mercury ion, GO:0010229 - inflorescence development, GO:0003756 - protein disulfide isomerase activity, GO:0005788 - endoplasmic reticulum lumen","TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000382 - 1000-seed weight, TO:0000621 - inflorescence development trait, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0000598 - protein content, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000333 - sugar content","PO:0009047 - stem , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009005 - root , PO:0025034 - leaf , PO:0009010 - seed ","Os11g0199200","LOC_Os11g09280.2, LOC_Os11g09280.1",{"$nulls":6},"SPL24","Spl24","SPOTTED LEAF 24","spotted leaf 24",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os07g0558400","Os02g0285300","Os01g0633100",1.5410696,1.1146822,null,"NAC14","ONAC014, ONAC14, OsNAC14, NAC14, OsNAC68, NAC68","NAC DOMAIN-CONTAINING PROTEIN 14","NAC domain-containing protein 014, NAC domain-containing protein 14",1," Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006282 - regulation of DNA repair, GO:0080134 - regulation of response to stress, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009409 - response to cold, GO:0042594 - response to starvation, GO:0006808 - regulation of nitrogen utilization, GO:0031347 - regulation of defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000153 - relative yield, TO:0000455 - seed set percent, TO:0000011 - nitrogen sensitivity, TO:0000303 - cold tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0002759 - grain number, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000040 - panicle length, TO:0000276 - drought tolerance, TO:0000371 - yield trait",null,"Os01g0675800","LOC_Os01g48446.1"]
[{"$nulls":6},"Os09g0459900","LOC_Os09g28580",6.248041,"Os12g0129700","LOC_Os12g03594",0,-2.2358558,{"$nulls":10},"Os04g0177400","Os02g0740400","Os12g0210800","Os12g0210800",2.5854127,1.5727291,null,"Os03g0250200",4.325434,"Os07g0167500",-1.5245718,{"$nulls":29},"SHR2","OsSHR2, OsGRAS-15, OsGRAS15, GRAS-15, GRAS15","SHORT ROOT GENE 2","rice SHORT  ROOT gene2, SHORT-ROOT 2, SHORTROOT2, SHORT-ROOT protein 2, GRAS protein 15",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0048364 - root development, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0051302 - regulation of cell division, GO:0010374 - stomatal complex development","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000656 - root development trait, TO:0000227 - root length, TO:0000043 - root anatomy and morphology trait, TO:0000306 - root thickness, TO:0000735 - plastochron, TO:0000566 - stomatal frequency","PO:0000258 - root cortex , PO:0007520 - root development stage , PO:0020138 - leaf lamina vein ","Os03g0433200","LOC_Os03g31880.1",{"$nulls":3},"Os05g0463800",0,-1.6632209,null,"YUCCA4","OsYUCCA4, OsYUC4, YUC4, YUCCA6, OsYUCCA6","YUCCA-LIKE GENE 4","(YUCCA-like gene)",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009737 - response to abscisic acid stimulus, GO:0009851 - auxin biosynthetic process, GO:0004499 - flavin-containing monooxygenase activity, GO:0048653 - anther development, GO:0042594 - response to starvation, GO:0009901 - anther dehiscence, GO:0051607 - defense response to virus","TO:0000148 - viral disease resistance, TO:0002672 - auxin content, TO:0000615 - abscisic acid sensitivity","PO:0001004 - anther development stage , PO:0009066 - anther ","Os01g0224700","LOC_Os01g12490.1",{"$nulls":6},"_","CysP13, CpP13, PG5a, Prol-06, pro13b.11, pro13b.12, PROLM9","_","cysteine-poor 13kDa prolamin, Cys-poor 13-kDa prolamin, Prolamin 9",5," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0005773 - vacuole, GO:0005783 - endoplasmic reticulum, GO:0033095 - aleurone grain, GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity",null,"PO:0009089 - endosperm ","Os05g0329100","LOC_Os05g26377.1, LOC_Os05g26386.1",{"$nulls":6},"SPL25","spl25","SPOTTED LEAF 25","spotted leaf 25",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os08g0104600","Os01g0127200","Os06g0208800",0,1.1089834,null,"_","OsSERK1, OsBAK1, OsSERK1/OsBAK1, OsBISERK1, OsSerk1, OsBAK1-1, 08SG2/OsBAK1, 08SG2, SG2","_","somatic embryogenesis receptor-like kinase 1, somatic embryogenesis receptor kinase 1, BRI1-associated receptor kinase 1, BTH-induced SERK1, benzothiadiazole-induced SERK1, bri1-associated receptor kinase 1 (BAK1) homologue 1, small grain 2",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0016021 - integral to membrane, GO:0009742 - brassinosteroid mediated signaling, GO:0032502 - developmental process, GO:0042127 - regulation of cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0004674 - protein serine/threonine kinase activity","TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0002759 - grain number",null,"Os08g0174700","LOC_Os08g07760.1"]
[{"$nulls":6},"Os12g0292400","LOC_Os12g19470",6.6509457,"Os12g0132800","LOC_Os12g03860",0,2.1567156,{"$nulls":10},"Os04g0405800","Os05g0480400","Os05g0455500","Os05g0455500",2.5600822,1.34377,null,"Os01g0775400",4.324076,"Os01g0883000",-1.5212613,{"$nulls":29},"_","FBPase, OsFBPase, OsSBPase, SBPase","_","Fru-1, 6-bisphosphatase, sedoheptulose 1, 7-bisphosphatase",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0019253 - reductive pentose-phosphate cycle, GO:0030388 - fructose 1,6-bisphosphate metabolic process, GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0006002 - fructose 6-phosphate metabolic process, GO:0006000 - fructose metabolic process, GO:0006094 - gluconeogenesis, GO:0016791 - phosphatase activity, GO:0005986 - sucrose biosynthetic process, GO:0005737 - cytoplasm, GO:0005975 - carbohydrate metabolic process","TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0000440 - grain number per plant, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000696 - starch content, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height","PO:0025034 - leaf ","Os04g0234600","LOC_Os04g16680.1",{"$nulls":3},"Os08g0174500",0,-1.6632209,null,"TDR","tdr, OsbHLH005, bHLH005, OsbHLH5, bhlh5, TDR1, OsTDR, OsTDR1, OsMYC5, MYC5","TAPETUM DEGENERATION RETARDATION","tapetum degeneration retardation, basic helix loop helix 5, basic/helix-loop-helix 5, Myelocytomatosis oncogene transcription factor 5",2," Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0048657 - tapetal cell differentiation, GO:0000978 - RNA polymerase II regulatory transcription factor site sequence-specific DNA binding, GO:0046983 - protein dimerization activity, GO:0003682 - chromatin binding, GO:0048658 - tapetal layer development, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0048653 - anther development, GO:0010208 - pollen wall assembly, GO:0010234 - tapetal cell fate specification, GO:0030528 - transcription regulator activity, GO:0009555 - pollen development, GO:0045449 - regulation of transcription, GO:0048654 - anther morphogenesis",null,"PO:0001004 - anther development stage , PO:0009066 - anther , PO:0009049 - inflorescence ","Os02g0120500","LOC_Os02g02820.1",{"$nulls":6},"_","RA17, RAP, RAG1, OsEnS-97","_","16-kDa rice allergen, 16 kDa albumin, endosperm-specific gene 97",7," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005615 - extracellular space, GO:0009651 - response to salt stress, GO:0004867 - serine-type endopeptidase inhibitor activity","TO:0006001 - salt tolerance",null,"Os07g0214100","LOC_Os07g11360.1",{"$nulls":6},"SPL26","Spl26","SPOTTED LEAF 26","spotted leaf 26",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os01g0869800","Os01g0822900","Os08g0101600",0,1.1028924,null,"NGLF","OsARG, ARG, Nglf, Nglf-1, OsAGM, AGM","NARROW GRAIN AND LOW FERTILITY","narrow grain and low fertility, arginase, Osarginase",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0042742 - defense response to bacterium, GO:0006527 - arginine catabolic process, GO:0050897 - cobalt ion binding, GO:0004053 - arginase activity, GO:0006596 - polyamine biosynthetic process","TO:0006001 - salt tolerance, TO:0000050 - inflorescence branching, TO:0002730 - grain shape, TO:0002759 - grain number",null,"Os04g0106300","LOC_Os04g01590.1"]
[{"$nulls":6},"Os01g0850700","LOC_Os01g63190",6.7043138,"Os12g0134300","LOC_Os12g04060",0,-1.8095843,{"$nulls":10},"Os04g0550500","Os11g0683500","Os01g0919900","Os01g0919900",2.5134144,3.6005642,null,"Os03g0624600",4.321589,"Os04g0508500",-1.5152645,{"$nulls":29},"CFM2","OsCFM2","_",null,4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0000372 - Group I intron splicing, GO:0009409 - response to cold, GO:0009532 - plastid stroma, GO:0009651 - response to salt stress, GO:0009658 - chloroplast organization, GO:0003723 - RNA binding, GO:0000373 - Group II intron splicing","TO:0000303 - cold tolerance, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0006001 - salt tolerance","PO:0009051 - spikelet , PO:0009047 - stem , PO:0025034 - leaf "," Os04g0464800","LOC_Os04g39060.2, LOC_Os04g39060.1",{"$nulls":3},"Os02g0134300",0,-1.9522705,null,"YAB5","OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1, OsTPB1","YABBY 5","Protein YABBY 5, TONGARI-BOUSHI1, TONGARI-BOUSHI 1",4," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0048437 - floral organ development, GO:0048366 - leaf development, GO:0046872 - metal ion binding, GO:0010073 - meristem maintenance, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0009908 - flower development","TO:0000621 - inflorescence development trait, TO:0000622 - flower development trait, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0025477 - floral organ primordium , PO:0007615 - flower development stage , PO:0000017 - vascular leaf primordium , PO:0001083 - inflorescence development stage , PO:0025487 - bract primordium ","Os04g0536300","LOC_Os04g45330.1",{"$nulls":6},"NRFG2","PFL, OsNRFG2","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 2","Protodermal Factor Like, neo-tetraploid rice fertility related gene 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000040 - panicle length, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait",null,"Os06g0553200","LOC_Os06g35970.1, LOC_Os06g35970.2",{"$nulls":6},"SPL27","Spl27","SPOTTED LEAF 27","spotted leaf 27",null," Tolerance and resistance - Lesion mimic","GO:0006952 - defense response",{"$nulls":4},"Os02g0697400","Os05g0524400","Os03g0214200",3.0248775,1.0746373,null,"PRP5","OsPRP5, OsRH42, RH42","_","Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0016607 - nuclear speck, GO:0008026 - ATP-dependent helicase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0003723 - RNA binding, GO:0030620 - U2 snRNA binding","TO:0000181 - seed weight, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0002759 - grain number","PO:0020040 - leaf base , PO:0020139 - leaf midvein , PO:0020137 - leaf apex , PO:0020103 - flag leaf , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root ","Os08g0159900","LOC_Os08g06344.1, LOC_Os08g06344.2, LOC_Os08g06344.3"]
[{"$nulls":6},"Os05g0190500","LOC_Os05g10210",6.838286,"Os12g0226700","LOC_Os12g12560",0,-1.2686224,{"$nulls":10},"Os04g0623800","Os07g0112000","Os03g0563300","Os03g0563300",2.476731,3.0603971,null,"Os09g0474000",4.3198514,"Os02g0504000",-1.5094649,{"$nulls":29},"CAF2","OsCAF2","CRS2-ASSOCIATED FACTOR 2","CRS2-associated factor 2",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0006397 - mRNA processing, GO:0003723 - RNA binding, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0008380 - RNA splicing, GO:0000373 - Group II intron splicing, GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0009570 - chloroplast stroma","TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000326 - leaf color, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0002715 - chloroplast development trait","PO:0009051 - spikelet , PO:0009047 - stem , PO:0025034 - leaf ","Os01g0323300","LOC_Os01g21990.1",{"$nulls":3},"Os12g0194900",0,-2.0046668,null,"CDPK2","OsCDPK2, OsCPK2","CALCIUM-DEPENDENT PROTEIN KINASE 2","calcium-dependent protein kinase",1," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0010857 - calcium-dependent protein kinase activity, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0080092 - regulation of pollen tube growth",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os01g0808400","LOC_Os01g59360.1",{"$nulls":6},"FTSZ1","FtsZ1, FtsZ, OsFtsZ1, OsFtsZ","_","plastid division protein FtsZ1",4," Seed - Morphological traits - Endosperm","GO:0005525 - GTP binding, GO:0003924 - GTPase activity, GO:0005874 - microtubule, GO:0051258 - protein polymerization, GO:0007017 - microtubule-based process",null,null,"Os04g0665400","LOC_Os04g56970.2, LOC_Os04g56970.1",{"$nulls":6},"AM1","OsAM1, prx53, OsPRX53","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 1","class III peroxidase 53",4," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009610 - response to symbiotic fungus",null,null,"Os04g0134800","LOC_Os04g04750.1","Os10g0371100","Os01g0303800","Os01g0918200",0,1.0638914,null,"TLD1","OsGH3-13, GH3-13, TLD1/OsGH3.13, TLD1, OsGH3.13, TLD2","INCREASED NUMBER OF TILLERS, ENLARGED LEAF ANGLES AND DWARFISM 1","increased number of tillers, enlarged leaf angles, and dwarfism 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009733 - response to auxin stimulus, GO:0009416 - response to light stimulus","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0000346 - tiller number",null,"Os11g0528700","LOC_Os11g32520.1, LOC_Os11g32510.1"]
[{"$nulls":6},"Os08g0489300","LOC_Os08g38170",6.915251,"Os12g0271700","LOC_Os12g17320",0,2.7686508,{"$nulls":10},"Os04g0640600","Os02g0158100","Os03g0712800","Os03g0712800",2.4170392,1.5344108,null,"Os04g0629600",4.3129053,"Os01g0694000",-1.5088626,{"$nulls":29},"BSR2","OsBSR2, CYP78A15, OsCYP78A15","BROAD-SPECTRUM RESISTANCE 2","BROAD-SPECTRUM RESISTANCE2, Cytochrome P450 78A15",8," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0020037 - heme binding, GO:0080112 - seed growth, GO:0050832 - defense response to fungus","TO:0000650 - lemma length, TO:0000531 - anther length, TO:0020033 - glume length, TO:0002610 - pistil length, TO:0000734 - grain length, TO:0000420 - fertility related trait, TO:0000360 - leaf elongation rate, TO:0000146 - seed length, TO:0002600 - flower organ size, TO:0000255 - sheath blight disease resistance, TO:0000391 - seed size, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009037 - lemma , PO:0009049 - inflorescence , PO:0009005 - root , PO:0025034 - leaf ","Os08g0547300","LOC_Os08g43390.1",{"$nulls":3},"Os11g0490900",-1.6612319,-2.0225337,null,"CDPK14","OsCDPK14, OsCPK14","CALCIUM-DEPENDENT PROTEIN KINASE 14","calcium-dependent protein kinase",5," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010857 - calcium-dependent protein kinase activity",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os05g0491900","LOC_Os05g41270.1",{"$nulls":6},"_","FtsZ2-1","_","plastid division protein FtsZ2-1",3," Seed - Morphological traits - Endosperm","GO:0043234 - protein complex, GO:0051301 - cell division, GO:0051258 - protein polymerization, GO:0005525 - GTP binding, GO:0003924 - GTPase activity",null,null,"Os03g0646100","LOC_Os03g44420.1",{"$nulls":6},"AM2","OsAM2, OsPI8-1a, PI8-1a","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 2","proteinase inhibitor 8-1a",8," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0012501 - programmed cell death, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0048658 - tapetal layer development, GO:0009610 - response to symbiotic fungus, GO:0009845 - seed germination, GO:0009611 - response to wounding","TO:0000357 - growth and development trait","PO:0001004 - anther development stage , PO:0007057 - 0 seed germination stage , PO:0020002 - anther wall endothecium , PO:0009047 - stem , PO:0020148 - shoot apical meristem ","Os08g0441200","LOC_Os08g34249.1","Os12g0292400","Os01g0125600","Os02g0510200",0,1.0548363,null,"BBX10","OsBBX10, OsJ, OsCCT14, OsCOL10, COL10, OsCOL9, CCT14, COL9","B-BOX-CONTAINING PROTEIN 10","B-box-containing protein 10, CCT domain-containing gene 14, CCT (CO, CO-LIKE and TOC1) domain protein 14, CCT domain protein 14, CONSTANS-Like 10, CONSTANS-like 9",3," Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus, GO:0009873 - ethylene mediated signaling pathway, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0008270 - zinc ion binding, GO:0005622 - intracellular","TO:0002616 - flowering time, TO:0000074 - blast disease, TO:0000447 - filled grain number, TO:0000173 - ethylene sensitivity, TO:0000137 - days to heading","PO:0004006 - mesophyll cell , PO:0025034 - leaf , PO:0009010 - seed , PO:0009006 - shoot system , PO:0007616 - flowering stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os03g0711100","LOC_Os03g50310.1"]
[{"$nulls":6},"Os02g0192700","LOC_Os02g09940",7.461029,"Os12g0292400","LOC_Os12g19470",0,6.6509457,{"$nulls":10},"Os04g0650800","Os03g0794500","Os05g0349700","Os05g0349700",2.3802779,2.0641327,null,"Os01g0257100",4.3060427,"Os05g0468100",-1.5076094,{"$nulls":29},"_","OsSLC1, SLC1","SEEDLING-LETHAL CHLOROSIS 1","seedling-lethal chlorosis 1",6," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0015979 - photosynthesis, GO:0000373 - Group II intron splicing","TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000522 - stomatal conductance, TO:0001018 - transpiration rate, TO:0001027 - net photosynthetic rate","PO:0025034 - leaf , PO:0009047 - stem , PO:0020104 - leaf sheath ","Os06g0710800","LOC_Os06g49670.2, LOC_Os06g49670.1",{"$nulls":3},"Os01g0930400",-3.64836,-2.081079,null,"CDPK22","OsCDPK22, OsCPK22","CALCIUM-DEPENDENT PROTEIN KINASE 22","calcium-dependent protein kinase",9," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010857 - calcium-dependent protein kinase activity, GO:0005524 - ATP binding, GO:0005509 - calcium ion binding, GO:0004674 - protein serine/threonine kinase activity",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os09g0514200","LOC_Os09g33910.1",{"$nulls":6},"_","ARC5, OsARC5, Os ARC5","_","ACCUMULATION AND REPLICATION OF CHLOROPLASTS5",12," Seed - Morphological traits - Endosperm","GO:0003924 - GTPase activity, GO:0005525 - GTP binding",null,null,"Os12g0178700","LOC_Os12g07880.1",{"$nulls":6},"BAD1","Badh1, badh1, BAD1, BADH1, OsBADH1, BADH, OsALDH10A5, ALDH10A5","BETAINE ALDEHYDE DEHYDROGENASE 1","betaine aldehyde dehydrogenase 1, Aldehyde dehydrogenase 10A5",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0008802 - betaine-aldehyde dehydrogenase activity, GO:0019285 - glycine betaine biosynthetic process from choline, GO:0010728 - regulation of hydrogen peroxide biosynthetic process, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005777 - peroxisome, GO:0005618 - cell wall, GO:0010037 - response to carbon dioxide, GO:0009416 - response to light stimulus, GO:0009408 - response to heat","TO:0000276 - drought tolerance, TO:0000075 - light sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000286 - submergence sensitivity",null,"Os04g0464200","LOC_Os04g39020.1","Os05g0480200","Os05g0586400","Os01g0916400",0,1.052749,null,"_","OsBBX13, BBX13, OsRIP1, RIP1","_","B-box-containing protein 13, OsRE1-INTERACTING PROTEIN 1, RE1-INTERACTING PROTEIN 1",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0048573 - photoperiodism, flowering, GO:0008270 - zinc ion binding, GO:0007623 - circadian rhythm, GO:0005622 - intracellular","TO:0000040 - panicle length, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0007616 - flowering stage , PO:0025034 - leaf , PO:0009006 - shoot system ","Os04g0540200","LOC_Os04g45690.1"]
[{"$nulls":6},"Os06g0289900","LOC_Os06g18670",7.8760147,"Os12g0431100","LOC_Os12g24320",0,-2.2190163,{"$nulls":10},"Os04g0659100","Os03g0161600","Os11g0544800","Os11g0544800",2.3657959,2.1625051,null,"Os06g0478600",4.3048077,"Os03g0275800",-1.5073284,{"$nulls":29},"SS","OsXYN1, OsXyn1, XYN1, OsSS, OsMORE1m, MORE1m","SLIM STEM","slim stem, xylanase-like protein 1, Magnaporthe oryzae resistance 1m",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0052543 - callose deposition in cell wall, GO:0050832 - defense response to fungus, GO:0040007 - growth, GO:0016020 - membrane, GO:0009414 - response to water deprivation, GO:0009664 - plant-type cell wall organization, GO:0045493 - xylan catabolic process, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds","TO:0000326 - leaf color, TO:0000085 - leaf rolling, TO:0001035 - stem width, TO:0000276 - drought tolerance, TO:0002667 - abscisic acid content, TO:0000074 - blast disease, TO:0000207 - plant height",null,"Os03g0672900","LOC_Os03g47010.1",{"$nulls":3},"Os03g0764900",-3.6407013,-2.1698039,null,"CDPK25","OsCDPK25, OsCPK25","CALCIUM-DEPENDENT PROTEIN KINASE 25","calcium-dependent protein kinase",11," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080092 - regulation of pollen tube growth, GO:0005886 - plasma membrane, GO:0010857 - calcium-dependent protein kinase activity, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0005737 - cytoplasm",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os11g0136600","LOC_Os11g04170.1",{"$nulls":6},"LPA","OsSultr3;3, OsSul3;3, SULTR3;3","LOW PHYTIC ACID ","sulphate transporter 3;3, low phytic acid",4," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0032958 - inositol phosphate biosynthetic process, GO:0046686 - response to cadmium ion, GO:0005783 - endoplasmic reticulum, GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0046685 - response to arsenic, GO:0010288 - response to lead ion, GO:0009414 - response to water deprivation, GO:0006797 - polyphosphate metabolic process, GO:0006790 - sulfur metabolic process, GO:0008271 - secondary active sulfate transmembrane transporter activity, GO:0009409 - response to cold, GO:0055063 - sulfate ion homeostasis","TO:0000488 - seed composition based quality trait, TO:0000276 - drought tolerance, TO:0000034 - chromium sensitivity, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0009073 - stigma , PO:0025034 - leaf , PO:0009005 - root ","Os04g0652400","LOC_Os04g55800.1",{"$nulls":6},"SAMDC","SamDC, AdoMetDC, AdoMetDC1, OsSAMDC1","S-ADENOSYLMETHIONINE DECARBOXYLASE","S-adenosylmethionine decarboxylase, S-adenosylmethionine decarboxylase proenzyme, S-adenosylmethionine decarboxylase alpha chain, S-adenosylmethionine decarboxylase beta chain, S-adenosylmethionine decarboxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0009555 - pollen development, GO:0006596 - polyamine biosynthetic process, GO:0016209 - antioxidant activity, GO:0009846 - pollen germination, GO:0008295 - spermidine biosynthetic process, GO:0006597 - spermine biosynthetic process, GO:0009409 - response to cold, GO:0004014 - adenosylmethionine decarboxylase activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0000303 - cold tolerance, TO:0000430 - germination rate, TO:0000421 - pollen fertility, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance",null,"Os04g0498600","LOC_Os04g42090.1, LOC_Os04g42090.2, LOC_Os04g42090.3, LOC_Os04g42090.4, LOC_Os04g42090.5, LOC_Os04g42095.1","Os01g0524500","Os03g0633800","Os03g0175600",0,1.0514646,null,"BBX17","OsBBX17, OsL, OsCCT20, CCT20, OsCOL16, COL16","B-BOX-CONTAINING PROTEIN 17","B-box-containing protein 17, CCT domain-containing gene 20, CCT (CO, CO-LIKE and TOC1) domain protein 20, CCT domain protein 20, CONSTANS-like protein 16",6," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005622 - intracellular, GO:0009651 - response to salt stress, GO:0010045 - response to nickel ion, GO:0010039 - response to iron ion, GO:0009739 - response to gibberellin stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0046686 - response to cadmium ion, GO:0003700 - transcription factor activity, GO:0008270 - zinc ion binding","TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000224 - iron sensitivity, TO:0006001 - salt tolerance","PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os06g0264200","LOC_Os06g15330.1"]
[{"$nulls":6},"Os08g0460000","LOC_Os08g35760",7.935741,"Os12g0510900","LOC_Os12g32620",0,3.5731878,{"$nulls":10},"Os05g0349700","Os09g0248900","Os04g0643200","Os04g0643200",2.344828,1.5039047,null,"Os03g0702500",4.304272,"Os12g0525300",-1.5070537,{"$nulls":29},"BOP2","OsNH5, NH5, OsBOP2","OsBLADE-ON-PETIOLE 2","NPR1 homologue 5, OsBLADE-ON-PETIOLE2",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0009790 - embryonic development, GO:0048366 - leaf development","TO:0000621 - inflorescence development trait, TO:0000492 - leaf shape","PO:0020104 - leaf sheath , PO:0000017 - vascular leaf primordium , PO:0020105 - ligule , PO:0020128 - leaf margin , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os11g0141900","LOC_Os11g04600.1",{"$nulls":3},"Os01g0919800",-4.09928,-2.1748767,null,"CDPK26","OsCDPK26, OsCPK26","CALCIUM-DEPENDENT PROTEIN KINASE 26","calcium-dependent protein kinase",12," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0010857 - calcium-dependent protein kinase activity, GO:0005509 - calcium ion binding",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os12g0133500","LOC_Os12g03970.1",{"$nulls":6},"SIZ1","OsSIZ1, OsSIZ1.1, OsSIZ1.2, OsSIZ1.3, DLN131, OsDLN131, OsPHD23, PHD23","_","SAP and MIZ 1, SUMO ligase Siz1, Siz/PIAS-type SUMO ligase 1, SIZ/PIAS-type SUMO E3 ligase 1, E3 SUMO-protein ligase SIZ1, DLN repressor 131, DLN motif protein 131, Plant homeo-domain finger protein 23, PHD finger protein 23",5," Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009901 - anther dehiscence, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0003676 - nucleic acid binding, GO:0016874 - ligase activity","TO:0000342 - panicle axis angle, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000146 - seed length, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0125000","LOC_Os05g03430.3, LOC_Os05g03430.2, LOC_Os05g03430.1",{"$nulls":6},"SRWD1","SRWD1, OsWD40-162","SALT RESPONSIVE WD40 PROTEIN 1","salt responsive WD40 protein 1",8," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",null,null,"Os08g0497600","LOC_Os08g38880.1, LOC_Os08g38880.2, LOC_Os08g38880.3, LOC_Os08g38880.4, LOC_Os08g38880.5, LOC_Os08g38880.6","Os04g0352400","Os03g0236200","Os12g0210200",0,1.0485562,null,"GL3.1","OsPPKL1, PPKL1, qGL3, OsPP54, PP54, OsGL3.1, qGL3/OsPPKL1","GRAIN LENGTH 3.1","protein phosphatase with Kelch-like repeat domain 1, grain length 3, Grain Length 3.1, Protein phosphatase 54",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0030145 - manganese ion binding, GO:0005506 - iron ion binding, GO:0009742 - brassinosteroid mediated signaling, GO:0004721 - phosphoprotein phosphatase activity, GO:0005886 - plasma membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0005829 - cytosol","TO:0000734 - grain length, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending",null,"Os03g0646900","LOC_Os03g44500.1"]
[{"$nulls":6},"Os02g0781400","LOC_Os02g54060",8.439939,"Os12g0548300","LOC_Os12g36194",0,2.6423004,{"$nulls":10},"Os05g0455500","Os01g0174000","Os08g0130400","Os08g0130400",2.3004496,4.418789,null,"Os03g0341000",4.300297,"Os04g0683700",-1.505579,{"$nulls":29},"BOP3","NH5, OsNH5, OsBOP3","BLADE-ON-PETIOLE 3","NPR1 homologue 5, OsBLADE-ON-PETIOLE3",12," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0009790 - embryonic development, GO:0048366 - leaf development, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway","TO:0000492 - leaf shape, TO:0000240 - sterile lemma length, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020105 - ligule , PO:0020128 - leaf margin , PO:0009051 - spikelet , PO:0000017 - vascular leaf primordium , PO:0020104 - leaf sheath ","Os12g0138500","LOC_Os12g04410.1",{"$nulls":3},"Os03g0582300",0,-2.1764817,null,"CDPK27","OsCDPK27, OsCPK27","CALCIUM-DEPENDENT PROTEIN KINASE 27","calcium-dependent protein kinase",12," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005509 - calcium ion binding, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os12g0486600","LOC_Os12g30150.1",{"$nulls":6},"SIZ2","OsSIZ2","_","SAP and MIZ 2, SIZ/PIAS-type SUMO E3 ligase 2",3," Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009901 - anther dehiscence, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0019789 - SUMO ligase activity, GO:0051301 - cell division, GO:0016049 - cell growth, GO:0048653 - anther development, GO:0048316 - seed development, GO:0009910 - negative regulation of flower development, GO:0016925 - protein sumoylation, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0040008 - regulation of growth, GO:0010337 - regulation of salicylic acid metabolic process, GO:0050826 - response to freezing, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding","TO:0000146 - seed length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0001004 - anther development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os03g0719100","LOC_Os03g50980.1",{"$nulls":6},"SRWD2","SRWD2, OsWD40-52","SALT RESPONSIVE WD40 PROTEIN 2","salt responsive WD40 protein 2",2," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",null,null,"Os02g0721600","LOC_Os02g48964.1","Os04g0509600","Os01g0702700","Os12g0118400",1.7567202,1.0484266,null,"PL","OsMYB55, OsMYB-2, MYB55, MYB-2, OsPL","PURPLE LEAF","R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55, purple leaf",5," Vegetative organ - Leaf,  Coloration - Anthocyanin,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010150 - leaf senescence, GO:0009755 - hormone-mediated signaling, GO:0009408 - response to heat, GO:0003682 - chromatin binding, GO:0030912 - response to deep water, GO:0009718 - anthocyanin biosynthetic process, GO:0003677 - DNA binding, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000524 - submergence tolerance, TO:0002672 - auxin content, TO:0002667 - abscisic acid content, TO:0002668 - jasmonic acid content, TO:0000071 - anthocyanin content, TO:0000734 - grain length, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0002724 - leaf sheath color","PO:0001054 - 4 leaf senescence stage ","Os05g0553400","LOC_Os05g48010.1"]
[{"$nulls":6},"Os01g0878900","LOC_Os01g65690",9.539226,"Os12g0609500","LOC_Os12g41590",0,1.5288626,{"$nulls":10},"Os05g0455700","Os10g0437600","Os06g0681600","Os06g0681600",2.2868707,1.6549255,null,"Os11g0107000",4.300106,"Os05g0130500",-1.4984912,{"$nulls":29},"TCD3","OsTCD3","THERMO-SENSITIVE CHLOROPHYLL-DEFICIENT 3","thermo-sensitive chlorophyll-deficient 3",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0009658 - chloroplast organization, GO:0009409 - response to cold, GO:0009507 - chloroplast, GO:0001522 - pseudouridine synthesis, GO:0032544 - plastid translation, GO:0000489 - maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA), GO:0000488 - maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA), GO:0003723 - RNA binding, GO:0009982 - pseudouridine synthase activity","TO:0002715 - chloroplast development trait, TO:0000303 - cold tolerance, TO:0002759 - grain number, TO:0000326 - leaf color, TO:0000152 - panicle number, TO:0000293 - chlorophyll-a content, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content","PO:0025034 - leaf ","Os03g0152700","LOC_Os03g05806.1",{"$nulls":3},"Os10g0580400",-2.7884464,-2.238878,null,"CDPK29","OsCDPK29, OsCPK29","CALCIUM-DEPENDENT PROTEIN KINASE 29","calcium-dependent protein kinase",12," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0010857 - calcium-dependent protein kinase activity, GO:0005524 - ATP binding",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os12g0230200","LOC_Os12g12860.1",{"$nulls":6},"EXPA10","OsEXPA10, OsEXP10, osaEXPa1.28","ALPHA-EXPANSIN 10","Expansin-A10",4," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0009751 - response to salicylic acid stimulus, GO:0005576 - extracellular region, GO:0005618 - cell wall, GO:0048364 - root development, GO:0009664 - plant-type cell wall organization, GO:0016020 - membrane, GO:0009826 - unidimensional cell growth, GO:0009737 - response to abscisic acid stimulus, GO:0002213 - defense response to insect, GO:0042742 - defense response to bacterium, GO:0010044 - response to aluminum ion","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000354 - aluminum sensitivity, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000306 - root thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000227 - root length, TO:0000734 - grain length, TO:0000656 - root development trait","PO:0007520 - root development stage , PO:0009005 - root , PO:0000025 - root tip ","Os04g0583500","LOC_Os04g49410.1",{"$nulls":6},"SRWD3","SRWD3, OsWD40-126","SALT RESPONSIVE WD40 PROTEIN 3","salt responsive WD40 protein 3",6," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",null,null,"Os06g0171900","LOC_Os06g07540.1, LOC_Os06g07540.2, LOC_Os06g07540.3","Os04g0668900","Os03g0411300","Os05g0491200",1.8963717,1.044405,null,"DST","OsDST, DLN102, OsDLN102","DROUGHT AND SALT TOLERANCE","zinc finger transcription factor DST, Drought and Salt Tolerance gene, DLN repressor 102, DLN motif protein 102",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010119 - regulation of stomatal movement, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress","TO:0002759 - grain number, TO:0006001 - salt tolerance, TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0000143 - relative biomass, TO:0000370 - leaf width, TO:0001016 - relative chlorophyll content, TO:0000095 - osmotic response sensitivity, TO:0000456 - spikelet number, TO:0000136 - relative water content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000608 - sodium content, TO:0000609 - potassium content",null,"Os03g0786400","LOC_Os03g57240.1"]
[{"$nulls":23},"Os05g0460600","Os08g0524800","Os03g0720300","Os03g0720300",2.2339284,1.5257059,null,"Os08g0459300",4.298104,"Os03g0281300",-1.495973,{"$nulls":29},"PPR756","OsPPR756","PENTATRICOPEPTIDE REPEAT PROTEIN 756","Pentatricopeptide repeat protein 756",12," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009451 - RNA modification, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0009555 - pollen development, GO:0043231 - intracellular membrane-bounded organelle","TO:0000180 - spikelet fertility, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0006032 - panicle size, TO:0000214 - anther shape, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000206 - leaf angle, TO:0000455 - seed set percent","PO:0001007 - pollen development stage , PO:0009047 - stem , PO:0009066 - anther , PO:0009010 - seed ","Os12g0289800","LOC_Os12g19260.1",{"$nulls":3},"Os05g0555600",3.5486362,-2.5385206,null,"GHD7","Ghd2, Ghd7, OsGhd7, OsCCT26, OsCMF8, OsI, Ghd7/Hd4, Hd4, EH7-1/Hd4, Ghd7-0a, EH7-1, EH7/Ghd7, EH7, OsEH7","HEADING DATE 7","heading date 7, \\Grain number, plant height, and heading date7\\\", \\\"GRAIN NUMBER, PLANT HEIGHT AND HEADING DATE 7\\\", CCT domain-containing gene 26, CCT (CO, CO-LIKE and TOC1) domain protein 26, CCT domain protein 26, CCT MOTIF FAMILY (CMF) gene 8, Early heading 7\"",7," Vegetative organ - Culm,  Reproductive organ - Heading date,  Heterochrony,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0009648 - photoperiodism, GO:0007623 - circadian rhythm","TO:0000137 - days to heading, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000050 - inflorescence branching, TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0000469 - days to maturity, TO:0000456 - spikelet number, TO:0000229 - photoperiod sensitivity, TO:0000207 - plant height",null,"Os07g0261200","LOC_Os07g15770.1",{"$nulls":6},"SODCC2","Cu/Zn-SOD, Cu/Zn- SOD, OsSODB, OsSOD3, SodCc2, Os SodCc2, sodB, OsSodB, RSODB, OssodCc1, OsCSD1.1, CSD1.1, OsCDS1, OsSOD3-CU/Zn, SOD3-CU/Zn, CuZnSOD2, Cu/ZnSOD2, OsCu/ZnSOD2, OsCSD1, CSD1, CuZnSOD1","CYTOSOLIC SUPEROXIDASE DISMUTASE 2","Cu/Zn-superoxide dismutase, superoxide dismutase B, copper/zinc-superoxide dismutase, \\Cu, Zn superoxide dismutase\\\", cytosolic copper/zinc-superoxide dismutase 2, \\\"Superoxide dismutase (Cu-Zn) 4, cytosolic\\\", Cu-dependent SOD 1.1\"",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0019430 - removal of superoxide radicals, GO:0006979 - response to oxidative stress, GO:0012501 - programmed cell death, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0005507 - copper ion binding, GO:0004784 - superoxide dismutase activity, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0010039 - response to iron ion, GO:0009845 - seed germination","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0002657 - oxidative stress, TO:0000040 - panicle length, TO:0000447 - filled grain number","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage , PO:0005360 - aleurone layer ","Os07g0665200","LOC_Os07g46990.2, LOC_Os07g46990.1",{"$nulls":6},"SRWD4","SRWD4, OsWD40-160","SALT RESPONSIVE WD40 PROTEIN 4","salt responsive WD40 protein 4",8," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",null,null,"Os08g0408200","LOC_Os08g31560.1","Os12g0210200","Os08g0512700","Os06g0623300",0,1.040073,null,"_","OsDUR3, DUR3","_","high-affinity urea transporter OsDUR3",10," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0006995 - cellular response to nitrogen starvation, GO:0015204 - urea transmembrane transporter activity, GO:0015293 - symporter activity, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane","TO:0000011 - nitrogen sensitivity, TO:0000447 - filled grain number, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000371 - yield trait","PO:0000034 - vascular system , PO:0020139 - leaf midvein ","Os10g0580400","LOC_Os10g42960.1"]
[{"$nulls":23},"Os05g0517500","Os01g0371500","Os06g0729000","Os06g0729000",2.196682,2.9180725,null,"Os02g0815200",4.2946944,"Os09g0464100",-1.4957584,{"$nulls":29},"PPR16","OsPPR16","PENTATRICOPEPTIDE REPEAT PROTEIN 16","pentatricopeptide repeat protein 16",6," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009658 - chloroplast organization, GO:0016556 - mRNA modification, GO:0009507 - chloroplast, GO:0015995 - chlorophyll biosynthetic process","TO:0000295 - chlorophyll-b content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content",null,"Os06g0112000","LOC_Os06g02200.1",{"$nulls":3},"Os10g0573900",-2.1658926,-2.732528,null,"RL9","rl9, SLL1/RL9, SLL1, OsSLL1, OsADD1, ADD1, KANADI1","ROLLED LEAF 9","SHALLOT-LIKE1, SHALLOT-LIKE 1, ROLLED LEAF9, anther dehiscence defected 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0003682 - chromatin binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010158 - abaxial cell fate specification, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0010088 - phloem development, GO:0048364 - root development, GO:0048653 - anther development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0012501 - programmed cell death, GO:0048316 - seed development, GO:0009555 - pollen development","TO:0000655 - leaf development trait, TO:0001012 - lateral root length, TO:0000207 - plant height, TO:0000474 - glume opening, TO:0000391 - seed size, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000656 - root development trait, TO:0000085 - leaf rolling, TO:0000653 - seed development trait, TO:0000316 - photosynthetic ability, TO:0000053 - pollen sterility, TO:0000227 - root length, TO:0001006 - adventitious root number, TO:0000495 - chlorophyll content","PO:0001007 - pollen development stage , PO:0001050 - leaf development stage , PO:0006019 - leaf abaxial epidermis , PO:0001004 - anther development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0025426 - phloem development stage , PO:0020104 - leaf sheath , PO:0000293 - guard cell ","Os09g0395300","LOC_Os09g23200.1",{"$nulls":6},"MAP3","OsMAPK33, OsMPK14, OsMAPK2, OsMAP3, OsMAPK14, OsMPK3, MAPK33, MPK14, MAPK2, MAPK14, MPK3, OsMAPK3, MAPK3","_","MAP kinase 14, MAP kinase 3",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0005524 - ATP binding, GO:0004707 - MAP kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:2000033 - regulation of seed dormancy, GO:0009814 - defense response, incompatible interaction, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect, GO:0009611 - response to wounding, GO:0000165 - MAPKKK cascade, GO:0042542 - response to hydrogen peroxide, GO:0009753 - response to jasmonic acid stimulus","TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity, TO:0000253 - seed dormancy, TO:0000401 - plant growth hormone sensitivity, TO:0000424 - brown planthopper resistance, TO:0000172 - jasmonic acid sensitivity",null,"Os02g0148100","LOC_Os02g05480.2, LOC_Os02g05480.1",{"$nulls":6},"SRWD5","OsSRWD5, OsWD40-73","SALT RESPONSIVE WD40 PROTEIN 5","salt responsive WD40 protein 5",3," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",null,null,"Os03g0386000","LOC_Os03g26870.1, LOC_Os03g26870.2","Os06g0604200","Os12g0503000","Os01g0670800",1.4240936,1.0322542,null,"MIR162A","miR162a, osa-miR162a, osa-MIR162a, OsMIR162a","MICRORNA162A","MICRORNA162a, osa-miRNA162a",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0035195 - gene silencing by miRNA, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex","TO:0000605 - hydrogen peroxide content, TO:0000449 - grain yield per plant, TO:0000371 - yield trait, TO:0000074 - blast disease, TO:0000455 - seed set percent"]
[{"$nulls":23},"Os05g0555600","Os01g0524500","Os11g0131900","Os11g0131900",2.1340487,1.9461266,null,"Os05g0583600",4.2936397,"Os12g0441700",-1.4956417,{"$nulls":29},"CUR1","OsCUR1","CURLED LATER 1","curled later1, largest subunit of Elongator complex",7," Vegetative organ - Leaf,  Reproductive organ - Heading date","GO:0002098 - tRNA wobble uridine modification, GO:0033588 - Elongator holoenzyme complex, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0006979 - response to oxidative stress, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0071215 - cellular response to abscisic acid stimulus, GO:0000049 - tRNA binding, GO:0048366 - leaf development, GO:0010073 - meristem maintenance, GO:0051301 - cell division, GO:0048507 - meristem development, GO:0048573 - photoperiodism, flowering, GO:0048530 - fruit morphogenesis, GO:0009965 - leaf morphogenesis, GO:0031538 - negative regulation of anthocyanin metabolic process, GO:0035265 - organ growth, GO:0008284 - positive regulation of cell proliferation, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0005737 - cytoplasm","TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0006020 - shoot apical meristem development, TO:0000655 - leaf development trait, TO:0002681 - leaf curling, TO:0000370 - leaf width","PO:0001050 - leaf development stage , PO:0000037 - shoot apex , PO:0001051 - 1 leaf initiation stage ","Os07g0563700","LOC_Os07g37640.1",{"$nulls":7},"AGPL4","OsAGPL4, APL4, OsAPL4, OsSTA193","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 4","sativa ADP-glucose pyrophosphorylase large subunit 4, ADP-glucose Pyrophosphorylase large subunit 4, AGPase large subunit 4, AGPase large unit 4",7," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016779 - nucleotidyltransferase activity, GO:0019252 - starch biosynthetic process, GO:0009058 - biosynthetic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009536 - plastid","TO:0000106 - male sterility type, TO:0000696 - starch content","PO:0009089 - endosperm , PO:0009066 - anther ","Os07g0243200","LOC_Os07g13980.1",{"$nulls":6},"TIFY11C","OsJAZ2, JAZ2, OsJAZ 11, OsJAZ11, Os-JAZ11, JAZ11, OsTIFY11c. OsJAZ1, JAZ1","TIFY GENE 11C","Jasmonate ZIM-domain protein 2, Jasmonate ZIM-domain protein 11",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0016036 - cellular response to phosphate starvation, GO:0055062 - phosphate ion homeostasis, GO:0010966 - regulation of phosphate transport, GO:0031347 - regulation of defense response, GO:0042594 - response to starvation, GO:0080022 - primary root development, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0002757 - flag leaf length, TO:0000227 - root length, TO:0000148 - viral disease resistance, TO:0000207 - plant height, TO:0000180 - spikelet fertility",null,"Os03g0180900","LOC_Os03g08320.1",{"$nulls":6},"PT1","OsPT1, PHT1-1, OsPht1;1, Pht1;1, OsPHT1;1, PHT1;1","PHOSPHATE TRANSPORTER 1","Inorganic phosphate transporter 1-1, phosphate transporter 1, Plant Phosphate Transporter 1.1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0015293 - symporter activity, GO:0046688 - response to copper ion, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0042594 - response to starvation, GO:0055085 - transmembrane transport, GO:0006817 - phosphate transport, GO:0046685 - response to arsenic, GO:0016020 - membrane","TO:0000102 - phosphorus sensitivity, TO:0000021 - copper sensitivity","PO:0020103 - flag leaf ","Os03g0150600","LOC_Os03g05620.1","Os03g0214100","Os01g0719300","Os06g0498400",1.4988832,1.0321459,null,"MIR168A","miR168a, osa-miR168a, osa-MIR168a osa-miR168a-3p osa-miR168a-5p, OsMIR168a","MICRORNA168A","MICRORNA168a, osa-miRNA168a",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0048573 - photoperiodism, flowering, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling","TO:0000202 - germination ratio, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0002768 - spikelet length, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability"]
[{"$nulls":23},"Os06g0132400","Os10g0516100","Os05g0129000","Os05g0129000",2.0921073,1.2048731,null,"Os02g0725000",4.2863555,"Os02g0178100",-1.4953613,{"$nulls":29},"WSL9","OsWSL9","WHITE STRIPE LEAF 9","white stripe leaf 9",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0003676 - nucleic acid binding, GO:0008380 - RNA splicing, GO:0048366 - leaf development, GO:0009266 - response to temperature stimulus, GO:0009658 - chloroplast organization, GO:0004519 - endonuclease activity, GO:0009451 - RNA modification","TO:0000432 - temperature response trait, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000655 - leaf development trait, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait","PO:0020104 - leaf sheath , PO:0001050 - leaf development stage , PO:0025034 - leaf , PO:0009005 - root , PO:0009047 - stem ","Os03g0169800","LOC_Os03g07370.1",{"$nulls":7},"AGO1B","OsAGO1b, AGO1b, AGO1-2","ARGONAUTE 1B","Protein argonaute 1B",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048366 - leaf development, GO:0031047 - gene silencing by RNA, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding, GO:0005737 - cytoplasm","TO:0000421 - pollen fertility, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000655 - leaf development trait, TO:0000455 - seed set percent","PO:0000002 - anther wall , PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os04g0566500","LOC_Os04g47870.2, LOC_Os04g47870.1",{"$nulls":6},"TIFY11A","OsJAZ3, JAZ3, OsJAZ 9, OsJAZ9, Os-JAZ9, JAZ9, OsTIFY11a, OsJAZ6, JAZ6","TIFY GENE 11A","Jasmonate ZIM-domain protein 3, Jasmonate ZIM-domain protein 9",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000397 - grain size",null,"Os03g0180800","LOC_Os03g08310.1",{"$nulls":6},"PT2","OsPT2, PTH1-2, OsPht1;2, PHT1;2, OsPHT1;2","PHOSPHATE TRANSPORTER 2","High affinity phosphate transporter 2, Inorganic phosphate transporter 1-2, Plant Phosphate Transporter 1;2",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009735 - response to cytokinin stimulus, GO:0015293 - symporter activity, GO:0042594 - response to starvation, GO:0005886 - plasma membrane, GO:0016036 - cellular response to phosphate starvation, GO:0009610 - response to symbiotic fungus, GO:0009733 - response to auxin stimulus, GO:0016020 - membrane, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006817 - phosphate transport, GO:0016021 - integral to membrane, GO:0010167 - response to nitrate, GO:0005783 - endoplasmic reticulum, GO:0055085 - transmembrane transport","TO:0000163 - auxin sensitivity, TO:0000102 - phosphorus sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity","PO:0009005 - root ","Os03g0150800","LOC_Os03g05640.1","Os06g0208800","Os05g0355300","Os08g0558200",0,1.0272084,null,"LC2","OsLC2, OsVIL2, VIL2, OsVIL3","LEAF INCLINATION 2","leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3",2," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0051302 - regulation of cell division, GO:0009733 - response to auxin stimulus, GO:2000028 - regulation of photoperiodism, flowering","TO:0000166 - gibberellic acid sensitivity, TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000163 - auxin sensitivity, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0006032 - panicle size, TO:0000615 - abscisic acid sensitivity, TO:0002616 - flowering time",null,"Os02g0152500","LOC_Os02g05840.1"]
[{"$nulls":23},"Os06g0564500","Os05g0191500","Os12g0263000","Os12g0263000",2.0778656,2.1643085,null,"Os01g0744000",4.2784195,"Os03g0363200",-1.4932932,{"$nulls":29},"HCF222","OsHCF222","HIGH CHLOROPHYLL FLUORESCENCE 222","HIGH CHLOROPHYLL FLUORESCENCE222",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0042651 - thylakoid membrane, GO:0009507 - chloroplast, GO:0005783 - endoplasmic reticulum, GO:0009658 - chloroplast organization, GO:0010027 - thylakoid membrane organization","TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000605 - hydrogen peroxide content",null,"Os03g0414400","LOC_Os03g30092.1",{"$nulls":7},"LCD1","NRAMP5, OsNRAMP5, OsNramp5, OsLCD1","LOW CADMIUM ACCUMULATION 1","BACTERIOCIDE EFFECT 5, NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 5, low cadmium accumulation 1",7," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010033 - response to organic substance, GO:0006811 - ion transport, GO:0007623 - circadian rhythm, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0009088 - threonine biosynthetic process, GO:0006523 - alanine biosynthetic process, GO:0006537 - glutamate biosynthetic process, GO:0015691 - cadmium ion transport, GO:0055072 - iron ion homeostasis, GO:0005886 - plasma membrane, GO:0010378 - temperature compensation of the circadian clock, GO:0010233 - phloem transport, GO:0009266 - response to temperature stimulus, GO:0046686 - response to cadmium ion, GO:0006828 - manganese ion transport, GO:0009094 - L-phenylalanine biosynthetic process","TO:0000044 - stigma exsertion, TO:0002673 - amino acid content, TO:0000388 - forage yield, TO:0000397 - grain size, TO:0000432 - temperature response trait","PO:0005059 - root endodermis , PO:0005772 - exodermis ","Os07g0257200","LOC_Os07g15370.1, LOC_Os07g15370.2",{"$nulls":6},"TIFY11B","OsJAZ4, JAZ4, OsJAZ 10, OsJAZ10, JAZ10, OsTIFY11b","TIFY GENE 11B","Jasmonate ZIM-domain protein 4, Jasmonate ZIM-domain protein 10",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009409 - response to cold, GO:0005634 - nucleus","TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000180 - spikelet fertility, TO:0000303 - cold tolerance, TO:0002757 - flag leaf length, TO:0000172 - jasmonic acid sensitivity",null,"Os03g0181100","LOC_Os03g08330.1",{"$nulls":6},"PT3","OsPT3, PHT1-3, OsPht1;3, OjPT1, PHT1;3","PHOSPHATE TRANSPORTER 3","Probable inorganic phosphate transporter 1-3",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0042594 - response to starvation, GO:0015293 - symporter activity, GO:0016020 - membrane, GO:0006817 - phosphate transport, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane","TO:0000102 - phosphorus sensitivity","PO:0005020 - vascular bundle , PO:0005417 - phloem ","Os10g0444600","LOC_Os10g30770.1","Os05g0375400","Os12g0111600","Os03g0118400",0,1.0222226,null,"HSP71.1","OsHsp71.1, OsHSP71.1, OsMED37_3, MED37_3","71.1 KDA CLASS I HEAT SHOCK PROTEIN","71.1 kDa heat shock protein, 71.1-kD heat shock protein, Mediator 37_3",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0046686 - response to cadmium ion, GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0009409 - response to cold","TO:0000396 - grain yield, TO:0000653 - seed development trait, TO:0000382 - 1000-seed weight, TO:0000303 - cold tolerance, TO:0000402 - grain width","PO:0001170 - seed development stage ","Os03g0276500","LOC_Os03g16860.1, LOC_Os03g16860.2"]
[{"$nulls":23},"Os06g0604200","Os01g0134500","Os03g0106400","Os03g0106400",2.032217,2.145069,null,"Os07g0567400",4.278233,"Os03g0766900",-1.4931911,{"$nulls":29},"TSCD11","OsTSCD11","TEMPERATURE-SENSITIVE CHLOROPHYLL-DEFICIENT 11","temperature-sensitive chlorophyll-deficient 11",11," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0005739 - mitochondrion, GO:0046466 - membrane lipid catabolic process, GO:0015979 - photosynthesis, GO:0015995 - chlorophyll biosynthetic process, GO:0009408 - response to heat, GO:0009658 - chloroplast organization, GO:0005524 - ATP binding, GO:0004828 - serine-tRNA ligase activity, GO:0000049 - tRNA binding, GO:0070158 - mitochondrial seryl-tRNA aminoacylation, GO:0048481 - ovule development, GO:0006434 - seryl-tRNA aminoacylation, GO:0009507 - chloroplast","TO:0000259 - heat tolerance, TO:0000495 - chlorophyll content, TO:0000069 - variegated leaf, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000326 - leaf color, TO:0000455 - seed set percent, TO:0000592 - 1000-dehulled grain weight, TO:0000496 - carotenoid content, TO:0000605 - hydrogen peroxide content, TO:0002715 - chloroplast development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0009047 - stem , PO:0020104 - leaf sheath ","Os11g0610900","LOC_Os11g39670.2, LOC_Os11g39670.1",{"$nulls":7},"HB4","OSHB4, OsHox32, HOX32, OsHB4, Oshox32, PHB3","HOMEODOMAIN CONTAINING PROTEIN 4","Homeobox-leucine zipper protein HOX32, Homeodomain transcription factor HOX32, HD-ZIP protein HOX32, rice homeobox gene 32",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0048366 - leaf development, GO:0009416 - response to light stimulus, GO:0042546 - cell wall biogenesis, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009733 - response to auxin stimulus, GO:0046686 - response to cadmium ion, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000051 - stem strength, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000615 - abscisic acid sensitivity, TO:0000085 - leaf rolling, TO:0000075 - light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000206 - leaf angle","PO:0001050 - leaf development stage ","Os03g0640800","LOC_Os03g43930.2, LOC_Os03g43930.1",{"$nulls":6},"TIFY10A","OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A","TIFY GENE 10A","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0031347 - regulation of defense response, GO:0005634 - nucleus, GO:0051607 - defense response to virus, GO:0009611 - response to wounding","TO:0002736 - flower number, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0002759 - grain number",null,"Os03g0402800","LOC_Os03g28940.2, LOC_Os03g28940.1",{"$nulls":6},"PT4","OsPT4, PHT1-4, OsPht1;4, PHT1-2, PHT1;4, OsPHT1;4","PHOSPHATE TRANSPORTER 4","Probable inorganic phosphate transporter 1-4, Plant Phosphate Transporter 1;4",4," Biochemical character,  Seed - Morphological traits - Embryo,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0016020 - membrane, GO:0055085 - transmembrane transport, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0009739 - response to gibberellin stimulus, GO:0046688 - response to copper ion, GO:0009790 - embryonic development, GO:0009733 - response to auxin stimulus, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0006817 - phosphate transport, GO:0009845 - seed germination, GO:0016036 - cellular response to phosphate starvation, GO:0015293 - symporter activity, GO:0009735 - response to cytokinin stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000021 - copper sensitivity, TO:0000102 - phosphorus sensitivity","PO:0007631 - plant embryo stage , PO:0009009 - plant embryo , PO:0020103 - flag leaf , PO:0007057 - 0 seed germination stage ","Os04g0186400","LOC_Os04g10750.4, LOC_Os04g10750.3, LOC_Os04g10750.2, LOC_Os04g10750.1","Os04g0574200","Os05g0593900","Os03g0214400",0,1.0209011,null,"GS5","OsSCP26, SCP26, OsGS5","GRAIN SIZE 5","serine carboxypeptidase 26, Grain Size 5",5," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0006508 - proteolysis, GO:0004185 - serine-type carboxypeptidase activity","TO:0002661 - seed maturation, TO:0000734 - grain length, TO:0000402 - grain width, TO:0000397 - grain size, TO:0000590 - grain weight",null,"Os05g0158500","LOC_Os05g06660.1, LOC_Os05g06660.2"]
[{"$nulls":23},"Os06g0677400","Os02g0113200","Os01g0134500","Os01g0134500",1.9972857,2.5228798,null,"Os10g0545500",4.2517276,"Os05g0534800",-1.4917682,{"$nulls":29},"T20","OsT20, Z-ISO, HTD12, OsHTD12","TILLERING 20","tillering20, zeta-Carotene Isomerase, HIGH-TILLERING AND DWARF 12",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009688 - abscisic acid biosynthetic process, GO:0016120 - carotene biosynthetic process, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0010109 - regulation of photosynthesis, GO:0009658 - chloroplast organization, GO:0006970 - response to osmotic stress, GO:0016117 - carotenoid biosynthetic process","TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000496 - carotenoid content, TO:0002715 - chloroplast development trait, TO:0000329 - tillering ability, TO:0000207 - plant height, TO:0002667 - abscisic acid content, TO:0000145 - internode length","PO:0020142 - stem internode , PO:0004709 - axillary bud , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0005004 - shoot node ","Os12g0405200","LOC_Os12g21710.1",{"$nulls":7},"OSC4","Osc4, OsC4, Osg4B, OsLTPc1, OsLtpIII.1, C4","ANTHER SPECIFIC PROTEIN 4","type C non-specific lipid transfer protein 1, non-specific lipid transfer protein c1, lipid transfer protein c1",8," Reproductive organ - Spikelet, flower, glume, awn","GO:0048653 - anther development, GO:0009555 - pollen development",null,"PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os08g0546300","LOC_Os08g43290.1",{"$nulls":6},"TIFY10B","OsJAZ6, OsJAZ 7, OsJAZ7, OsTIFY10B, JAZ6, JAZ7","TIFY GENE 10B","Jasmonate ZIM-domain protein 6, Jasmonate ZIM-domain protein 7.",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus","TO:0000576 - stem length, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0002759 - grain number, TO:0002736 - flower number, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0615200","LOC_Os07g42370.3, LOC_Os07g42370.2, LOC_Os07g42370.1",{"$nulls":6},"PT5","OsPT5, OsPht1;5, Pht1;5, PHT1-5","PHOSPHATE TRANSPORTER 5","Probable inorganic phosphate transporter 1-5",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0016036 - cellular response to phosphate starvation, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0015293 - symporter activity, GO:0006817 - phosphate transport","TO:0000102 - phosphorus sensitivity",null,"Os04g0185600","LOC_Os04g10690.1","Os03g0238600","Os03g0346200","Os05g0104200",1.5177399,1.015623,null,"PDR1","OsABCG45, OsPDR1, FCO1, OsPDR1.2, OsPDR1.3, OsPDR1.1","PLEIOTROPIC DRUG RESISTANCE 1","ABC transporter superfamily ABCG subgroup member 45, pleiotropic drug resistance 1, Functioning in Cesium Over-transport 1",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0006810 - transport, GO:0009753 - response to jasmonic acid stimulus, GO:0006952 - defense response, GO:0006200 - ATP catabolic process, GO:0005524 - ATP binding, GO:0030001 - metal ion transport, GO:0016887 - ATPase activity, GO:0016020 - membrane","TO:0000396 - grain yield, TO:0000112 - disease resistance, TO:0000357 - growth and development trait, TO:0002668 - jasmonic acid content, TO:0000172 - jasmonic acid sensitivity","PO:0009005 - root ","Os08g0544400","LOC_Os08g43120.1"]
[{"$nulls":23},"Os06g0704600","Os08g0566400","Os07g0576000","Os07g0576000",1.9653121,1.9480647,null,"Os12g0113900",4.251044,"Os03g0225600",-1.4909077,{"$nulls":29},"CPSRP54B","OscpSRP54b, cpSRP54b","CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54B","chloroplast signal recognition particle 54b",11," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0005786 - signal recognition particle, endoplasmic reticulum targeting, GO:0008312 - 7S RNA binding, GO:0003924 - GTPase activity, GO:0005525 - GTP binding, GO:0006614 - SRP-dependent cotranslational protein targeting to membrane, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast","TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000495 - chlorophyll content","PO:0025034 - leaf , PO:0009006 - shoot system ","Os11g0153700","LOC_Os11g05556.2, LOC_Os11g05556.1",{"$nulls":7},"OSC6","Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6","ANTHER SPECIFIC PROTEIN 6","GPI-anchored non-specific lipid transfer protein 25, type G nsLTP 25, type G non-specific lipid transfer protein 25",11," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008233 - peptidase activity, GO:0010584 - pollen exine formation, GO:0006869 - lipid transport, GO:0009555 - pollen development","TO:0000432 - temperature response trait","PO:0009066 - anther ","Os11g0582500","LOC_Os11g37280.1",{"$nulls":6},"TIFY10C","OsJAZ7, JAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8","TIFY GENE 10C","Jasmonate ZIM-domain protein 7, Jasmonate ZIM-domain protein 8.",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0005829 - cytosol, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002736 - flower number, TO:0002759 - grain number, TO:0000172 - jasmonic acid sensitivity, TO:0002757 - flag leaf length, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ","Os09g0439200","LOC_Os09g26780.1",{"$nulls":6},"PT6","OsPT6, PHT1-6, OsPht1;6, OsLPT6:1, OsLPT1, OsPT6:1, Pht1;6, LPT6:1, LPT1, PT6:1","PHOSPHATE TRANSPORTER 6","Inorganic phosphate transporter 1-6",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009610 - response to symbiotic fungus, GO:0010167 - response to nitrate, GO:0042594 - response to starvation, GO:0055085 - transmembrane transport, GO:0009733 - response to auxin stimulus, GO:0006817 - phosphate transport, GO:0009735 - response to cytokinin stimulus, GO:0015293 - symporter activity, GO:0005886 - plasma membrane, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016020 - membrane, GO:0009737 - response to abscisic acid stimulus","TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000102 - phosphorus sensitivity, TO:0000615 - abscisic acid sensitivity","PO:0005052 - plant callus ","Os08g0564000","LOC_Os08g45000.1","Os04g0671200","Os03g0233900","Os06g0237502",0,1.0056585,null,"ESG1","ABCI10, OsABCI10, OsABCI10_1, OsABCI10_2, OsESG1","ENLARGED STARCH GRAIN 1","ABC transporter superfamily ABCI subgroup member 10, enlarged starch grain1",4," Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0019375 - galactolipid biosynthetic process, GO:0009414 - response to water deprivation, GO:0009707 - chloroplast outer membrane, GO:0006869 - lipid transport, GO:0048316 - seed development, GO:0009660 - amyloplast organization, GO:0033097 - amyloplast membrane, GO:0031969 - chloroplast membrane","TO:0000104 - floury endosperm, TO:0002655 - starch grain size, TO:0000162 - seed quality, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content","PO:0001170 - seed development stage ","Os04g0553000","LOC_Os04g46700.1, LOC_Os04g46700.2"]
[{"$nulls":23},"Os07g0176900","Os02g0750200","Os01g0232700","Os01g0232700",1.9449066,1.0168957,null,"Os07g0552800",4.2491183,"Os01g0841600",-1.489267,{"$nulls":29},"YPD1","OsYPD1","YELLOW AND PREMATURE DWARF 1","LRR-like1 protein, LRR-like1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching","GO:0008219 - cell death, GO:0031969 - chloroplast membrane, GO:0010941 - regulation of cell death, GO:0009658 - chloroplast organization, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0009642 - response to light intensity, GO:0010150 - leaf senescence","TO:0000460 - light intensity sensitivity, TO:0000494 - pigment content, TO:0002715 - chloroplast development trait, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000547 - primary branch number, TO:0000605 - hydrogen peroxide content, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000298 - chlorophyll ratio, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os06g0237502","LOC_Os06g13050.1",{"$nulls":7},"RAP1A","OsMADS15, FDRMADS3, RMADS215, MADS15, DEP","RICE APETALA 1A","MADS-box transcription factor 15, Protein APETALA1-like A, degenerative palea, MADS box gene15",7," Reproductive organ,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003006 - reproductive developmental process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0005515 - protein binding, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0010228 - vegetative to reproductive phase transition",null,"PO:0020094 - plant egg cell ","Os07g0108900","LOC_Os07g01820.6, LOC_Os07g01820.5, LOC_Os07g01820.4, LOC_Os07g01820.1, LOC_Os07g01820.2, LOC_Os07g01820.3",{"$nulls":6},"TIFY9","OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ11/TIFY9","TIFY GENE 9","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000172 - jasmonic acid sensitivity, TO:0000207 - plant height, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000148 - viral disease resistance",null,"Os04g0395800","LOC_Os04g32480.1",{"$nulls":6},"PT8","OsPT8, PHT1-8, OsPht1;8, Pht1;8, PHT1;8, OsPHT1;8","PHOSPHATE TRANSPORTER 8","Probable inorganic phosphate transporter 1-8, Plant Phosphate Transporter 1;8",10," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0005783 - endoplasmic reticulum, GO:0042742 - defense response to bacterium, GO:0042594 - response to starvation, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0002221 - pattern recognition receptor signaling pathway, GO:0048831 - regulation of shoot development, GO:0002237 - response to molecule of bacterial origin, GO:0002238 - response to molecule of fungal origin, GO:0031348 - negative regulation of defense response, GO:0009733 - response to auxin stimulus, GO:0016036 - cellular response to phosphate starvation, GO:0009737 - response to abscisic acid stimulus, GO:0046685 - response to arsenic, GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0016020 - membrane","TO:0000074 - blast disease, TO:0000102 - phosphorus sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000163 - auxin sensitivity, TO:0000021 - copper sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000043 - root anatomy and morphology trait","PO:0025164 - root epidermal cell ","Os10g0444700","LOC_Os10g30790.2, LOC_Os10g30790.1","Os01g0848200","Os02g0652100","Os01g0883800",-2.0003462,1.0044001,null,"OAT","OsOAT, delta-OAT","ORNITHINE DELTA-AMINOTRANSFERASE","ornithine delta-aminotransferase, ornithine aminotransferase",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006593 - ornithine catabolic process, GO:0009741 - response to brassinosteroid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0019544 - arginine catabolic process to glutamate, GO:0030170 - pyridoxal phosphate binding, GO:0042538 - hyperosmotic salinity response, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0006979 - response to oxidative stress, GO:0005759 - mitochondrial matrix, GO:0004587 - ornithine-oxo-acid transaminase activity, GO:0008270 - zinc ion binding, GO:0009856 - pollination, GO:0009901 - anther dehiscence, GO:0009908 - flower development, GO:0006561 - proline biosynthetic process, GO:0009414 - response to water deprivation, GO:0009413 - response to flooding","TO:0000095 - osmotic response sensitivity, TO:0000622 - flower development trait, TO:0006002 - proline content, TO:0002673 - amino acid content, TO:0020034 - glume width, TO:0000180 - spikelet fertility, TO:0000474 - glume opening, TO:0020033 - glume length, TO:0000484 - seed shape","PO:0007615 - flower development stage ","Os03g0643300","LOC_Os03g44150.1"]
[{"$nulls":23},"Os07g0485400","Os07g0229700","Os03g0856700","Os03g0856700",1.9106296,1.865975,null,"Os06g0662550",4.2405696,"Os03g0297000",-1.4890162,{"$nulls":29},"ERA1","OsERA1, OsERA1.1, OsERA1.2","ENHANCED RESPONSE TO ABA1 ",null,3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0018343 - protein farnesylation, GO:0005965 - protein farnesyltransferase complex, GO:0010119 - regulation of stomatal movement, GO:0080022 - primary root development, GO:0009414 - response to water deprivation, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0004660 - protein farnesyltransferase activity, GO:0008270 - zinc ion binding, GO:0018342 - protein prenylation","TO:0000522 - stomatal conductance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance",null,"Os01g0737800","LOC_Os01g53600.2, LOC_Os01g53600.1",{"$nulls":7},"LF1","HOX10, Oshox10, OsHox10, OsHB1, HB1, OSHB1, LF1/OsHB1, OsLF1","LATERAL FLORET 1","rice homeobox gene 10, Homeobox-leucine zipper protein HOX10, Homeodomain transcription factor HOX10, HD-ZIP protein HOX10, HOMEODOMAIN CONTAINING PROTEIN 1, Homeodomain transcription factor HOX10, lateral florets 1",3," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009955 - adaxial/abaxial pattern formation, GO:0006350 - transcription, GO:0048366 - leaf development, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0010582 - floral meristem determinacy, GO:0009908 - flower development, GO:0001708 - cell fate specification, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000614 - lemma shape, TO:0002672 - auxin content, TO:0000657 - spikelet anatomy and morphology trait","PO:0001050 - leaf development stage , PO:0009037 - lemma , PO:0005352 - xylem , PO:0006022 - bundle sheath extension , PO:0020148 - shoot apical meristem , PO:0000017 - vascular leaf primordium , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root ","Os03g0109400","LOC_Os03g01890.2, LOC_Os03g01890.1",{"$nulls":6},"GSTU34","OsGSTU34","TAU GLUTATHIONE S-TRANSFERASE 34",null,10," Biochemical character,  Coloration - Anthocyanin,  Seed - Morphological traits","GO:0005737 - cytoplasm, GO:0006749 - glutathione metabolic process, GO:0004364 - glutathione transferase activity","TO:0000071 - anthocyanin content",null,"Os10g0395400","LOC_Os10g25590.1",{"$nulls":6},"PT9","OsPT9, PHT1-9, OsPht1;9","PHOSPHATE TRANSPORTER 9","Probable inorganic phosphate transporter 1-9",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0016036 - cellular response to phosphate starvation, GO:0055085 - transmembrane transport, GO:0005739 - mitochondrion, GO:0016020 - membrane, GO:0016021 - integral to membrane",null,null,"Os06g0324800","LOC_Os06g21920.1","Os02g0810900","Os01g0326000","Os06g0499500",0,1.0032129,null,"PLS1","OsVHA-A, VHAA1, VHA-A1, OsVHA-A1, OsPLS1, OsPSL1/VHA-A1","PREMATURE LEAF SENESCENCE 1","vacuolar H+-ATPase subunit A, vacuolar-type H+-ATPase subunit A1, premature leaf senescence 1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005618 - cell wall, GO:0009734 - auxin mediated signaling pathway, GO:0007030 - Golgi organization, GO:0009555 - pollen development, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0033180 - proton-transporting V-type ATPase, V1 domain, GO:0009737 - response to abscisic acid stimulus, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010148 - transpiration, GO:0010150 - leaf senescence, GO:0010162 - seed dormancy, GO:0009941 - chloroplast envelope, GO:0046961 - proton-transporting ATPase activity, rotational mechanism, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0000325 - plant-type vacuole, GO:0005886 - plasma membrane, GO:0005774 - vacuolar membrane, GO:0005524 - ATP binding","TO:0000063 - mimic response, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000455 - seed set percent, TO:0000128 - harvest index, TO:0000592 - 1000-dehulled grain weight, TO:0000598 - protein content, TO:0000333 - sugar content, TO:0001027 - net photosynthetic rate, TO:0000040 - panicle length, TO:0000253 - seed dormancy, TO:0000249 - leaf senescence, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000615 - abscisic acid sensitivity, TO:0001018 - transpiration rate","PO:0001054 - 4 leaf senescence stage , PO:0025374 - seed dormant stage , PO:0020025 - micropyle ","Os06g0662000 ","LOC_Os06g45120.2, LOC_Os06g45120.1"]
[{"$nulls":23},"Os08g0424500","Os06g0264800","Os02g0668100","Os02g0668100",1.8796076,-2.4695454,null,"Os07g0628600",4.239537,"Os01g0178200",-1.488505,{"$nulls":29},"DGP1","OsDGP1","DEEP GREEN PANICLE 1","DEEP GREEN PANICLE1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0015995 - chlorophyll biosynthetic process, GO:0010109 - regulation of photosynthesis, GO:0009416 - response to light stimulus","TO:0000495 - chlorophyll content, TO:0000075 - light sensitivity, TO:0000221 - glume color, TO:0000326 - leaf color","PO:0009039 - glume ","Os01g0837600","LOC_Os01g62060.3, LOC_Os01g62060.2, LOC_Os01g62060.1",{"$nulls":7},"CYP703A3","OsCYP703A3","CYTOCHROME P450 HYDROXYLASE 703A3",null,8," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004497 - monooxygenase activity, GO:0048653 - anther development, GO:0010584 - pollen exine formation","TO:0000245 - pollen free, TO:0000437 - male sterility","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0009066 - anther ","Os08g0131100","LOC_Os08g03682.1",{"$nulls":6},"ATG7","OsATG7, Atg7","AUTOPHAGY ASSOCIATED GENE 7","autophagy 7, OsAuTophaGy7, autophagy-related 7, AUTOPHAGY RELATED7",1," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Grain quality","GO:0010581 - regulation of starch biosynthetic process, GO:0006914 - autophagy, GO:0010150 - leaf senescence, GO:0010152 - pollen maturation, GO:0006109 - regulation of carbohydrate metabolic process, GO:0010431 - seed maturation, GO:0000166 - nucleotide binding, GO:0003824 - catalytic activity, GO:0005737 - cytoplasm, GO:0006629 - lipid metabolic process, GO:0009846 - pollen germination, GO:0009901 - anther dehiscence, GO:0046470 - phosphatidylcholine metabolic process, GO:0048653 - anther development, GO:0048316 - seed development, GO:0009960 - endosperm development, GO:0005983 - starch catabolic process","TO:0002675 - gibberellic acid content, TO:0002637 - leaf size, TO:0000397 - grain size, TO:0002660 - cytokinin content, TO:0002655 - starch grain size, TO:0002661 - seed maturation, TO:0000106 - male sterility type, TO:0000266 - chalky endosperm, TO:0000696 - starch content, TO:0000249 - leaf senescence, TO:0000653 - seed development trait","PO:0001007 - pollen development stage , PO:0001054 - 4 leaf senescence stage , PO:0001004 - anther development stage , PO:0001035 - G anther dehiscence stage , PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0007632 - seed maturation stage ","Os01g0614900","LOC_Os01g42850.2, LOC_Os01g42850.1",{"$nulls":6},"PT10","OsPT10, PHT1-10, OsPht1;10","PHOSPHATE TRANSPORTER 10","Probable inorganic phosphate transporter 1-10",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0005886 - plasma membrane, GO:0055085 - transmembrane transport, GO:0042594 - response to starvation, GO:0016020 - membrane, GO:0016021 - integral to membrane","TO:0000102 - phosphorus sensitivity",null,"Os06g0325200","LOC_Os06g21950.1","Os02g0190600","Os12g0601400","Os06g0352900",0,0.9882434,null,"SMG2","YDA1, OsMKKK10, MKKK10, SMG2/OsMKKK10, OsSMG2, OsMAPKKK10, MAPKKK10","SMALL GRAIN 2","YODA 1, OsYODA-2, YODA-2, MAPK kinase kinase 10, small grain 2",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042127 - regulation of cell proliferation, GO:0010103 - stomatal complex morphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009793 - embryonic development ending in seed dormancy, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0080036 - regulation of cytokinin mediated signaling","TO:0002660 - cytokinin content, TO:0000590 - grain weight, TO:0002677 - brassinosteroid sensitivity, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os04g0559800 ","LOC_Os04g47240.3, LOC_Os04g47240.2, LOC_Os04g47240.1"]
[{"$nulls":23},"Os08g0532200","Os07g0619800","Os12g0615400","Os12g0615400",1.8686042,1.7629586,null,"Os03g0271500",4.239015,"Os05g0424300",-1.4884156,{"$nulls":29},"DNL4","DNL-4, OsDNL-4, OsDNL4","DWARF AND NARROW LEAF 4","dwarf and narrow leaf 4",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape","GO:0016301 - kinase activity","TO:0000040 - panicle length, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000370 - leaf width",null,"Os01g0105900","LOC_Os01g01620.1",{"$nulls":7},"SIP1;2","OsSIP1;2, OsSTA98","SMALL AND BASIC INTRINSIC PROTEIN 1;2",null,3," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006810 - transport, GO:0016021 - integral to membrane, GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,"PO:0009066 - anther ","Os03g0320000","LOC_Os03g20410.1",{"$nulls":6},"ATG8B","OsATG8b, Atg8b","AUTOPHAGY ASSOCIATED GENE 8B","autophagy 8b, OsAuTophaGy8b, AUTOPHAGY RELATED8b",4," Biochemical character,  Vegetative organ - Root,  Coloration - Chlorophyll,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0005773 - vacuole, GO:0033110 - CVT vesicle membrane, GO:0042594 - response to starvation, GO:0005829 - cytosol, GO:0005776 - autophagic vacuole, GO:0016020 - membrane, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0019740 - nitrogen utilization, GO:0006995 - cellular response to nitrogen starvation, GO:0048316 - seed development, GO:0000421 - autophagic vacuole membrane, GO:0005874 - microtubule, GO:0000045 - autophagic vacuole formation, GO:0015031 - protein transport, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0010508 - positive regulation of autophagy, GO:0006914 - autophagy, GO:0048364 - root development","TO:0000266 - chalky endosperm, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0001027 - net photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000457 - total biomass yield, TO:0000357 - growth and development trait, TO:0000506 - nitrogen recycling, TO:0000352 - plant dry weight, TO:0000656 - root development trait, TO:0000325 - soluble protein content, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0000449 - grain yield per plant, TO:0000706 - hull color, TO:0000440 - grain number per plant, TO:0000011 - nitrogen sensitivity","PO:0009005 - root , PO:0025034 - leaf , PO:0007632 - seed maturation stage , PO:0001170 - seed development stage ","Os04g0624000","LOC_Os04g53240.1, LOC_Os04g53240.4, LOC_Os04g53240.3, LOC_Os04g53240.2",{"$nulls":6},"PT11","OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11","PHOSPHATE TRANSPORTER 11","Inorganic phosphate transporter 1-11, PHOSPHATE TRANSPORTER1;11",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0016020 - membrane, GO:0009642 - response to light intensity, GO:0055085 - transmembrane transport, GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0009610 - response to symbiotic fungus, GO:0005886 - plasma membrane, GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0006810 - transport, GO:0009733 - response to auxin stimulus, GO:0005215 - transporter activity","TO:0000163 - auxin sensitivity, TO:0000460 - light intensity sensitivity, TO:0000102 - phosphorus sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000615 - abscisic acid sensitivity","PO:0009029 - stamen ","Os01g0657100","LOC_Os01g46860.1","Os01g0841600","Os03g0855100","Os02g0580800",1.3621451,0.9842709,null,"SET1","OsSET1, SDG721, OsSDG721","SET PROTEIN 1","SET protein 1, SET DOMAIN GROUP 721 protein",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005634 - nucleus, GO:0010446 - response to alkalinity, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0051568 - histone H3-K4 methylation, GO:0008168 - methyltransferase activity, GO:0008270 - zinc ion binding, GO:0009294 - DNA mediated transformation","TO:0000206 - leaf angle, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0020004 - shoot sodium content, TO:0000525 - sodium to potassium content ratio, TO:0020003 - shoot potassium content, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000481 - alkali sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000397 - grain size","PO:0009047 - stem , PO:0009005 - root , PO:0009039 - glume , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0218800","LOC_Os01g11952.1"]
[{"$nulls":23},"Os09g0436500","Os01g0636500","Os03g0171900","Os03g0171900",1.8576733,1.9032122,null,"Os05g0589200",4.2357736,"Os03g0132900",-1.4874182,{"$nulls":29},"NBL1","OsNBL1","NATURE BLIGHT LEAF 1","Nature Blight Leaf 1",10," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0005794 - Golgi apparatus, GO:0005783 - endoplasmic reticulum, GO:0005737 - cytoplasm, GO:0016020 - membrane, GO:0009751 - response to salicylic acid stimulus, GO:0043067 - regulation of programmed cell death, GO:0009646 - response to absence of light, GO:0046907 - intracellular transport, GO:0012505 - endomembrane system, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000634 - node number, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000590 - grain weight, TO:0000455 - seed set percent, TO:0002730 - grain shape, TO:0000175 - bacterial blight disease resistance, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000145 - internode length, TO:0000346 - tiller number","PO:0001054 - 4 leaf senescence stage ","Os10g0478900","LOC_Os10g33855.2, LOC_Os10g33855.1",{"$nulls":7},"MIR159A","miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2","MICRORNA159A",null,1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009555 - pollen development, GO:0035068 - micro-ribonucleoprotein complex, GO:0048316 - seed development, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0048443 - stamen development","TO:0000074 - blast disease, TO:0000734 - grain length, TO:0006032 - panicle size, TO:0000696 - starch content, TO:0000053 - pollen sterility, TO:0000187 - anther color, TO:0000342 - panicle axis angle, TO:0000447 - filled grain number, TO:0000485 - sterility related trait, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000371 - yield trait","PO:0001170 - seed development stage , PO:0001007 - pollen development stage ","Os01g0507000","LOC_Os01g32259.1",{"$nulls":6},"ERF28","OsERF#028, OsERF028, OsERF28, OsERF#029, OsERF029, OsERF29, ERF29, DERF4, OsDERF4, AP2/EREBP#161, AP2/EREBP161, OsDREB1J, OsDREB1I, OsDREB1G","ETHYLENE RESPONSE FACTOR 28","drought-responsive ethylene response factor 4, drought-responsive ERF 4, ethylene response factor 28, ethylene response factor 29, APETALA2/ethylene-responsive element binding protein 161, Dehydration-responsive element-binding protein 1J, Dehydration-responsive element-binding protein 1I",8," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0005634 - nucleus, GO:0006950 - response to stress, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent","TO:0000276 - drought tolerance","PO:0007022 - seed imbibition stage ","Os08g0545500","LOC_Os08g43200.1, LOC_Os08g43210.1",{"$nulls":6},"PT12","OsPT12, PHT1-12, OsPht1;12","PHOSPHATE TRANSPORTER 12","Probable inorganic phosphate transporter 1-12",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0042594 - response to starvation, GO:0016020 - membrane, GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009845 - seed germination, GO:0009739 - response to gibberellin stimulus, GO:0009735 - response to cytokinin stimulus","TO:0000102 - phosphorus sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000166 - gibberellic acid sensitivity",null,"Os03g0150500","LOC_Os03g05610.1","Os03g0782500","Os08g0518900","Os03g0170400",0,0.98200226,null,"_","OsSET27, SDG701","_","SET protein 27, SET DOMAIN GROUP701, SET DOMAIN GROUP 701",8," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0048578 - positive regulation of long-day photoperiodism, flowering, GO:0042800 - histone methyltransferase activity (H3-K4 specific)","TO:0000592 - 1000-dehulled grain weight, TO:0002616 - flowering time, TO:0000450 - grain yield per panicle",null,"Os08g0180100","LOC_Os08g08210.1"]
[{"$nulls":23},"Os09g0565700","Os01g0652100","Os08g0532200","Os08g0532200",1.8331337,1.8685623,null,"Os07g0674400",4.2328553,"Os02g0573500",-1.4872049,{"$nulls":29},"DVB1","OsDVB1","DECREASED VASCULAR BUNDLE 1","Decreased Vascular Bundle 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042407 - cristae formation, GO:0006520 - cellular amino acid metabolic process, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0010600 - regulation of auxin biosynthetic process","TO:0000227 - root length, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0002672 - auxin content, TO:0000420 - fertility related trait, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000218 - pollen abortion type, TO:0000472 - vascular bundle number, TO:0000370 - leaf width","PO:0009006 - shoot system , PO:0009051 - spikelet , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0005020 - vascular bundle ","Os03g0840900","LOC_Os03g62420.1",{"$nulls":7},"GSL5","OsGSL5, OsSTA170","BETA-1,3-GLUCANASE ACTIVITY 5","Oryza sativa callose synthase 5, callose synthase 5, Glucan Synthase-Like 5",6," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0000148 - 1,3-beta-glucan synthase complex, GO:0009409 - response to cold, GO:0006075 - 1,3-beta-glucan biosynthetic process, GO:0016021 - integral to membrane, GO:0003843 - 1,3-beta-glucan synthase activity","TO:0000303 - cold tolerance","PO:0009066 - anther ","Os06g0182300","LOC_Os06g08380.1",{"$nulls":6},"NCED1","OSNCED1, OsNCED-1, OsNCED3, OsNced3, NCED3","9-CIS-EPOXYCAROTENOID DIOXYGENASE 1","9-cis-epoxycarotenoid dioxygenase 1, 9-Cis-Epoxycarotenoid Dioxygenase 3",3," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009688 - abscisic acid biosynthetic process, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0009408 - response to heat, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0009414 - response to water deprivation, GO:0002237 - response to molecule of bacterial origin, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0001666 - response to hypoxia","TO:0002667 - abscisic acid content, TO:0000276 - drought tolerance, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000015 - oxygen sensitivity, TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance","PO:0007057 - 0 seed germination stage ","Os03g0645900","LOC_Os03g44380.1",{"$nulls":6},"PT13","OsPT13, PHT1-13, OsPht1;13, ORYsa;PHT1;13","PHOSPHATE TRANSPORTER 13","Putative inorganic phosphate transporter 1-13, PHOSPHATE TRANSPORTER1;13",4," Biochemical character,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0002213 - defense response to insect, GO:0006817 - phosphate transport, GO:0015293 - symporter activity, GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0042594 - response to starvation, GO:0009735 - response to cytokinin stimulus","TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000102 - phosphorus sensitivity, TO:0000167 - cytokinin sensitivity","PO:0020103 - flag leaf ","Os04g0186800","LOC_Os04g10800.1","Os01g0322700","Os03g0654900","Os09g0419500",1.5415268,0.97944754,null,"_","OsMED15_1, MED15_1, OsKIX_3, KIX_3","_","KIX domain protein 3, Mediator 15_1",4," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0048316 - seed development, GO:0003712 - transcription cofactor activity, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os04g0127800","LOC_Os04g03860.1"]
[{"$nulls":23},"Os10g0516100","Os05g0155400","Os04g0507800","Os04g0507800",1.8013128,2.6061685,null,"Os02g0246900",4.2283235,"Os10g0515200",-1.4838794,{"$nulls":29},"CRP1","OsCRP1, cpRNP1, OsCP31A, CP31A","CHLOROPLAST RNA-BINDING PROTEIN 1",null,9," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, GO:0009535 - chloroplast thylakoid membrane, GO:0003729 - mRNA binding, GO:0009409 - response to cold, GO:0009642 - response to light intensity, GO:0006754 - ATP biosynthetic process, GO:0043488 - regulation of mRNA stability, GO:0009570 - chloroplast stroma, GO:0010109 - regulation of photosynthesis, GO:0003723 - RNA binding, GO:0009414 - response to water deprivation","TO:0000326 - leaf color, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000460 - light intensity sensitivity, TO:0000293 - chlorophyll-a content","PO:0025034 - leaf , PO:0009046 - flower ","Os09g0565200","LOC_Os09g39180.1",{"$nulls":7},"HAK6","OsHAK6, OsSTA42","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 6","High-affinity Potassium(K+) Transporter 6, Potassium transporter 6.",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0030955 - potassium ion binding, GO:0006813 - potassium ion transport",null,"PO:0009066 - anther ","Os01g0932500","LOC_Os01g70660.1",{"$nulls":6},"_","GADPH, OsGAPDHB, GAPDHB, OsGAPB, GAPB","_","glyceraldehyde-3-phosphate dehydrogenase, chloroplastic glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic GAPDH B subunit, beta subunit of glyceraldehyde-3-phosphate dehydrogenase, beta subunit of GAPDH",3," Biochemical character,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, GO:0051287 - NAD or NADH binding, GO:0019685 - photosynthesis, dark reaction, GO:0009642 - response to light intensity, GO:0050661 - NADP or NADPH binding, GO:0006006 - glucose metabolic process","TO:0000495 - chlorophyll content, TO:0000460 - light intensity sensitivity, TO:0000442 - plant fresh weight, TO:0000087 - aroma",null,"Os03g0129300","LOC_Os03g03720.1, LOC_Os03g03720.2",{"$nulls":6},"AOX1A","Ao1-1, AOX1a, OsAOX1a, AOX 1a","ALTERNATIVE OXIDASE 1A","alternative oxidase-1a, ubiquinol oxidase 1a",4," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0007585 - respiratory gaseous exchange, GO:0005740 - mitochondrial envelope, GO:0016491 - oxidoreductase activity, GO:0016021 - integral to membrane, GO:0009408 - response to heat, GO:0070469 - respiratory chain, GO:0046872 - metal ion binding, GO:0009916 - alternative oxidase activity, GO:0022900 - electron transport chain","TO:0000259 - heat tolerance, TO:0000432 - temperature response trait","PO:0000003 - whole plant ","Os04g0600200","LOC_Os04g51150.1","Os01g0578000","Os05g0386800","Os04g0537900",0,0.9706742,null,"TGW2","OsFWL1, FWL1, OsTGW2, OsCNR1, CNR1, OsPCR3, PCR3","THOUSAND GRAIN WEIGHT 2","FW2.2-like 1, FRUIT-WEIGHT2.2-LIKE 1, CELL NUMBER REGULATOR 1, plant cadmium resistance protein 3",2," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0016049 - cell growth, GO:0008283 - cell proliferation","TO:0000734 - grain length, TO:0000590 - grain weight, TO:0000605 - hydrogen peroxide content, TO:0000399 - grain thickness",null,"Os02g0763000","LOC_Os02g52550.1"]
[{"$nulls":23},"Os11g0610900","Os03g0198600","Os06g0132400","Os06g0132400",1.801102,3.1289246,null,"Os05g0554000",4.227717,"Os11g0629500",-1.4835685,{"$nulls":29},"LARGE2","OsLARGE2, OsUPL2, UPL2","UBIQUITIN PROTEIN LIGASE 2","Ubiquitin Protein Ligase 2",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0005737 - cytoplasm, GO:0000209 - protein polyubiquitination, GO:0016567 - protein ubiquitination, GO:0010073 - meristem maintenance, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0045732 - positive regulation of protein catabolic process","TO:0000339 - stem thickness, TO:0002759 - grain number, TO:0006032 - panicle size, TO:0000370 - leaf width","PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0428600","LOC_Os12g24080.1",{"$nulls":7},"PLDbeta2","OsPLDbeta2, OsSTA86","PHOSPHOLIPASE D beta 2",null,3," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005509 - calcium ion binding, GO:0046686 - response to cadmium ion, GO:0004630 - phospholipase D activity, GO:0046470 - phosphatidylcholine metabolic process, GO:0016042 - lipid catabolic process, GO:0016020 - membrane, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0070290 - NAPE-specific phospholipase D activity, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding",null,"PO:0009066 - anther ","Os03g0119100","LOC_Os03g02740.1",{"$nulls":6},"NRFG3","OsENODL17, ENODL17, OsNRFG3","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 3","early nodulin-like protein 17, neo-tetraploid rice fertility related gene 3",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009055 - electron carrier activity, GO:0005507 - copper ion binding, GO:0046658 - anchored to plasma membrane","TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0009066 - anther , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os06g0553800","LOC_Os06g36010.1",{"$nulls":6},"AOX1B","AOX1b, OsAOX1b","ALTERNATIVE OXIDASE 1B","alternative oxidase-1b",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016491 - oxidoreductase activity, GO:0007585 - respiratory gaseous exchange, GO:0009408 - response to heat, GO:0009916 - alternative oxidase activity, GO:0016021 - integral to membrane, GO:0070469 - respiratory chain, GO:0046872 - metal ion binding, GO:0022900 - electron transport chain, GO:0005740 - mitochondrial envelope","TO:0000432 - temperature response trait, TO:0000259 - heat tolerance","PO:0000003 - whole plant ","Os04g0600300","LOC_Os04g51160.1","Os09g0104200","Os04g0340300","Os02g0190600",0,0.9676053,null,"FWL4","OsFWL4","FRUIT-WEIGHT2.2-LIKE 4","FW2.2-like 4",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0015691 - cadmium ion transport, GO:0051781 - positive regulation of cell division","TO:0000080 - micronutrient sensitivity, TO:0000346 - tiller number, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000370 - leaf width","PO:0009006 - shoot system , PO:0009047 - stem , PO:0009089 - endosperm ","Os03g0829900","LOC_Os03g61440.1"]
[{"$nulls":23},"Os11g0629500","Os06g0705100","Os01g0782200","Os01g0782200",1.7902857,1.6842154,null,"Os03g0655100",4.226095,"Os06g0218900",-1.4822427,{"$nulls":29},"SPL36","OsSPL36","SPOTTED LEAF 36","spotted leaf 36",12," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0046466 - membrane lipid catabolic process, GO:0005737 - cytoplasm, GO:0016020 - membrane, GO:0009651 - response to salt stress, GO:0031347 - regulation of defense response, GO:0043067 - regulation of programmed cell death, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0009658 - chloroplast organization","TO:0006001 - salt tolerance, TO:0002715 - chloroplast development trait, TO:0001027 - net photosynthetic rate, TO:0000175 - bacterial blight disease resistance, TO:0000063 - mimic response, TO:0000605 - hydrogen peroxide content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000357 - growth and development trait","PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009047 - stem ","Os12g0182300","LOC_Os12g08180.1",{"$nulls":7},"PLDdelta1","OsPLDdelta1, OsPLDdelta, OsSTA233","PHOSPHOLIPASE D delta 1","phospholipase D delta",9," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004630 - phospholipase D activity, GO:0016042 - lipid catabolic process, GO:0012501 - programmed cell death, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0009506 - plasmodesma, GO:0070290 - NAPE-specific phospholipase D activity, GO:0046473 - phosphatidic acid metabolic process, GO:0046470 - phosphatidylcholine metabolic process, GO:0009409 - response to cold, GO:0005886 - plasma membrane, GO:0005773 - vacuole, GO:0005509 - calcium ion binding",null,"PO:0009066 - anther ","Os09g0543100","LOC_Os09g37100.1",{"$nulls":6},"DMT1","OsMCA1, MCA1, OsDMT1, OsDMT1/OsMCA1","DWARF AND MULTI-TILLERING1","Plasma membrane protein OsMCA1, Mid1-complementing activity1, dwarf and multi-tillering 1",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0070509 - calcium ion import, GO:0009685 - gibberellin metabolic process, GO:0050801 - ion homeostasis, GO:0005886 - plasma membrane, GO:0005887 - integral to plasma membrane, GO:0048528 - post-embryonic root development, GO:0007638 - mechanosensory behavior","TO:0000456 - spikelet number, TO:0002675 - gibberellic acid content, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os03g0157300","LOC_Os03g06120.3, LOC_Os03g06120.2, LOC_Os03g06120.1",{"$nulls":6},"AOX1C","OsAOX1c","ALTERNATIVE OXIDASE 1C","alternative oxidase-1c, Os-ubiquinol oxidase 1, ubiquinol oxidase 1, ubiquinol oxidase 1c",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0005740 - mitochondrial envelope, GO:0070469 - respiratory chain, GO:0046872 - metal ion binding, GO:0009916 - alternative oxidase activity, GO:0009408 - response to heat, GO:0022900 - electron transport chain, GO:0016491 - oxidoreductase activity, GO:0007585 - respiratory gaseous exchange","TO:0000259 - heat tolerance","PO:0000003 - whole plant , PO:0009011 - plant structure ","Os02g0700400","LOC_Os02g47200.1","Os06g0499500","Os10g0456800","Os01g0136100",0,0.9654362,null,"FWL6","OsFWL6, OsCNR10, CNR10","FW2.2-LIKE 6","FW2.2-like 6, fruit-weight 2.2-like 6, CELL NUMBER REGULATOR10",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0046686 - response to cadmium ion, GO:0048366 - leaf development, GO:0005886 - plasma membrane, GO:0005634 - nucleus","TO:0000655 - leaf development trait, TO:0000080 - micronutrient sensitivity, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield",null,"Os03g0830200","LOC_Os03g61470.1"]
[{"$nulls":23},"Os12g0210200","Os03g0823400","Os04g0682300","Os04g0682300",1.7406254,1.3813729,null,"Os01g0546400",4.2233124,"osa-miR169l",-1.4804888,{"$nulls":29},"ASL4","OsPRPS1, PRPS1, OsASL4","ALBINO SEEDLING LETHALITY 4","plastid 30S ribosomal protein S1, albino seedling lethality 4",3," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0015995 - chlorophyll biosynthetic process, GO:0003676 - nucleic acid binding, GO:0009579 - thylakoid, GO:0022627 - cytosolic small ribosomal subunit, GO:0009570 - chloroplast stroma, GO:0006412 - translation, GO:0003735 - structural constituent of ribosome, GO:0003729 - mRNA binding, GO:0042254 - ribosome biogenesis, GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0009416 - response to light stimulus, GO:0048366 - leaf development, GO:0042793 - transcription from plastid promoter, GO:0016117 - carotenoid biosynthetic process","TO:0000655 - leaf development trait, TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000075 - light sensitivity","PO:0020104 - leaf sheath , PO:0001050 - leaf development stage , PO:0025034 - leaf ","Os03g0315800","LOC_Os03g20100.1",{"$nulls":7},"DH1","OsDH1, OsLBD2-1, LBD2-1, OsLOB16, LOB16","DEGENERATED HULL 1","degenerated hull1, lateral organ boundaries domain 2-1",2," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0010311 - lateral root formation, GO:0048437 - floral organ development","TO:0000240 - sterile lemma length, TO:0006022 - floral organ development trait",null,"Os02g0820500","LOC_Os02g57490.1",{"$nulls":6},"GIF3","OsGIF3, OsGIF1, GIF1, MKB3","GRF-INTERACTING FACTOR 3","GRF1-interacting factor 3, GRF-interacting factor 3, Growth-regulating factor interacting factor 1, GRF interacting factor 1, MAKIBA3, MAKIBA 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008283 - cell proliferation, GO:0022414 - reproductive process, GO:0016049 - cell growth, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0009555 - pollen development, GO:0048481 - ovule development, GO:0048366 - leaf development, GO:0009955 - adaxial/abaxial pattern formation, GO:0080060 - integument development","TO:0002686 - cell growth and development trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0000370 - leaf width, TO:0000084 - root number, TO:0000306 - root thickness, TO:0000484 - seed shape, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000655 - leaf development trait, TO:0000485 - sterility related trait, TO:0002637 - leaf size, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait","PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0001007 - pollen development stage , PO:0007619 - ovule development stage , PO:0000017 - vascular leaf primordium ","Os03g0733600","LOC_Os03g52320.2, LOC_Os03g52320.1",{"$nulls":6},"GLP1","OsGLP1, GER1, GER5, GLP110, OsGER1, OsGER5, OsGLP8-14, GLP8-14","GERMIN-LIKE PROTEIN 1","Germin-like protein 8-14, Germin-like protein 5, Germin-like protein 1, Germin protein type 1, germin-like protein1",8," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0010229 - inflorescence development","TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020104 - leaf sheath ","Os08g0460000","LOC_Os08g35760.1","Os02g0731700","Os01g0924966","Os09g0380200",1.5105882,0.96530086,null,"LAC15","OsLAC, LAC, OsLAC15, OsLAC13, LAC13","LACCASE 15","lactase 15, laccase-13, laccase 13",5," Biochemical character,  Character as QTL - Yield and productivity","GO:0052386 - cell wall thickening, GO:0009414 - response to water deprivation, GO:0048046 - apoplast, GO:0008643 - carbohydrate transport, GO:0010821 - regulation of mitochondrion organization, GO:0009698 - phenylpropanoid metabolic process, GO:0005507 - copper ion binding, GO:0046274 - lignin catabolic process, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process","TO:0000180 - spikelet fertility","PO:0009030 - carpel , PO:0009038 - palea , PO:0009037 - lemma , PO:0009066 - anther ","Os05g0458600","LOC_Os05g38420.1"]
[{"$nulls":23},"Os12g0446900","Os09g0535000","Os06g0561000","Os06g0561000",1.6449728,4.2721057,null,"Os03g0178200",4.2230277,"Os05g0363600",-1.4797813,{"$nulls":29},"POW1","OsPOW1","PUT ON WEIGHT 1","put on weight 1",7," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0003682 - chromatin binding, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0051302 - regulation of cell division, GO:0031936 - negative regulation of chromatin silencing, GO:0035098 - ESC/E(Z) complex, GO:0035102 - PRC1 complex, GO:0046872 - metal ion binding","TO:0000397 - grain size, TO:0000206 - leaf angle",null,"Os07g0175100","LOC_Os07g07880.1",{"$nulls":7},"OG1","OsOPR7, OPR7, OsOPR13, OsOPR3, OsOPR5, OsOPR9, OsOPR08-1, OPR13, OPR3, OPR5, OPR9, OPR08-1","OPEN GLUME1","12-oxo-phytodienoic acid reductase 7, 12-oxophytodienoate reductase7, OPDA reductase 7, open glume 1",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010181 - FMN binding, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0008643 - carbohydrate transport, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0051607 - defense response to virus, GO:0005777 - peroxisome, GO:0009695 - jasmonic acid biosynthetic process","TO:0002668 - jasmonic acid content, TO:0000020 - black streak dwarf virus resistance, TO:0000696 - starch content, TO:0000184 - seed anatomy and morphology trait","PO:0007616 - flowering stage , PO:0009036 - lodicule , PO:0009039 - glume ","Os08g0459600","LOC_Os08g35740.2, LOC_Os08g35740.1",{"$nulls":6},"BZIP23","OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2, OsZIP23, ZIP23","b-ZIP TRANSCRIPTION FACTOR 23","Transcription Factor OsbZIP23, bZIP transcription factor 23, AREB/ABF-family protein 1",2," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0046983 - protein dimerization activity, GO:0007623 - circadian rhythm, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0009651 - response to salt stress, GO:0010029 - regulation of seed germination, GO:0000302 - response to reactive oxygen species","TO:0000396 - grain yield, TO:0002657 - oxidative stress, TO:0000615 - abscisic acid sensitivity, TO:0000136 - relative water content, TO:0006001 - salt tolerance, TO:0000333 - sugar content, TO:0000276 - drought tolerance, TO:0000168 - abiotic stress trait, TO:0006002 - proline content","PO:0007057 - 0 seed germination stage ","Os02g0766700","LOC_Os02g52780.2, LOC_Os02g52780.1",{"$nulls":6},"GLP12-1","OsGLP12-1","GERMIN-LIKE PROTEIN 12-1","Germin-like protein 12-1",12," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0048046 - apoplast, GO:0045735 - nutrient reservoir activity, GO:0050832 - defense response to fungus, GO:0030145 - manganese ion binding","TO:0000074 - blast disease",null,"Os12g0154700","LOC_Os12g05840.1","Os03g0711100","Os01g0283700","Os03g0170900",0,0.96311694,null,"GRX6","OsGRX6, OsGrx_I1, Grx_I1","GLUTAREDOXIN 6","glutaredoxin 6",1," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045487 - gibberellin catabolic process, GO:0048878 - chemical homeostasis, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009055 - electron carrier activity, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009686 - gibberellin biosynthetic process, GO:0009691 - cytokinin biosynthetic process, GO:0010476 - gibberellin-mediated signaling, GO:0015035 - protein disulfide oxidoreductase activity, GO:0015996 - chlorophyll catabolic process, GO:0045454 - cell redox homeostasis, GO:0046872 - metal ion binding, GO:0009736 - cytokinin mediated signaling, GO:0009826 - unidimensional cell growth","TO:0000445 - seed number, TO:0000402 - grain width, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000432 - temperature response trait, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002660 - cytokinin content, TO:0002675 - gibberellic acid content",null,"Os01g0667900","LOC_Os01g47760.1"]
[{"$nulls":23},"Os12g0540900","Os01g0110200","Os10g0493600","Os10g0493600",1.6268731,1.5362161,null,"Os03g0675500",4.22232,"Os05g0467700",-1.4776754,{"$nulls":29},"EIF5A1","OseIF5A-1, eIF5A-1","EUKARYOTIC TRANSLATION INITIATION FACTOR 5A1","Eukaryotic translation initiation factor 5 A-1",7," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009743 - response to carbohydrate stimulus, GO:0009651 - response to salt stress, GO:0010038 - response to metal ion, GO:0043022 - ribosome binding, GO:0003746 - translation elongation factor activity, GO:0045901 - positive regulation of translational elongation, GO:0045905 - positive regulation of translational termination, GO:0003743 - translation initiation factor activity, GO:0048366 - leaf development, GO:0042594 - response to starvation","TO:0000655 - leaf development trait, TO:0006001 - salt tolerance, TO:0000480 - nutrient sensitivity, TO:0000357 - growth and development trait","PO:0025034 - leaf , PO:0001050 - leaf development stage , PO:0009049 - inflorescence ","Os07g0597000","LOC_Os07g40580.1",{"$nulls":7},"PRR59","OsPRR59, Os-PRR59, Prr5, OsPRR5, OsCCT38, CCT38","PSEUDO-RESPONSE REGULATOR 59","pseudo-response regulator 5, CCT domain-containing gene 38, CCT (CO, CO-LIKE and TOC1) domain protein 38, CCT domain protein 38",11," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0000156 - two-component response regulator activity","TO:0000207 - plant height, TO:0000456 - spikelet number, TO:0000137 - days to heading, TO:0002616 - flowering time",null,"Os11g0157600","LOC_Os11g05930.5, LOC_Os11g05930.1, LOC_Os11g05930.2, LOC_Os11g05930.3, LOC_Os11g05930.4",{"$nulls":6},"SAPK2","OsSAPK2, OsSnRK2.2, SnRK2.2","STRESS/ABA-ACTIVATED PROTEIN KINASE 2","stress/ABA-activated protein kinase 2, Stress-Activated Protein Kinase 2, Sucrose nonfermenting-1-related protein kinase 2.2",7," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0005829 - cytosol, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0010162 - seed dormancy, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009738 - abscisic acid mediated signaling","TO:0000095 - osmotic response sensitivity, TO:0000253 - seed dormancy, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0007057 - 0 seed germination stage ","Os07g0622000","LOC_Os07g42940.1, LOC_Os07g42940.2, LOC_Os07g42940.3, LOC_Os07g42940.4, LOC_Os07g42940.9, LOC_Os07g42940.8, LOC_Os07g42940.7, LOC_Os07g42940.6, LOC_Os07g42940.5",{"$nulls":6},"GLP8-11","OsGLP8-11, RGLP1, OsRGLP1","GERMIN-LIKE PROTEIN 8-11","Germin-like protein 8-11",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048046 - apoplast, GO:0009723 - response to ethylene stimulus, GO:0009651 - response to salt stress, GO:0030912 - response to deep water, GO:0002242 - defense response to parasitic plant, GO:0030145 - manganese ion binding, GO:0050832 - defense response to fungus, GO:0005618 - cell wall, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009414 - response to water deprivation, GO:0045735 - nutrient reservoir activity","TO:0000444 - parasitic weed, TO:0000173 - ethylene sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000286 - submergence sensitivity, TO:0000276 - drought tolerance","PO:0009010 - seed ","Os08g0190100","LOC_Os08g09080.2, LOC_Os08g09080.1","Os05g0204600","Os07g0282300","Os01g0962700",0,0.9525461,null,"PP2C9","OsPP15, PP15, OsPP2C09, OsPP2C9","PROTEIN PHOSPHATASE 2C 9","protein phosphatase 15, protein phosphatase 2C09, protein phosphatase 2C9, protein phosphatase 2C 9",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0006470 - protein amino acid dephosphorylation, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0009737 - response to abscisic acid stimulus, GO:0080134 - regulation of response to stress, GO:0046872 - metal ion binding, GO:0016021 - integral to membrane, GO:0010119 - regulation of stomatal movement, GO:0030307 - positive regulation of cell growth, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0048831 - regulation of shoot development, GO:0010030 - positive regulation of seed germination, GO:0010374 - stomatal complex development, GO:0050891 - multicellular organismal water homeostasis, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0004722 - protein serine/threonine phosphatase activity","TO:0000430 - germination rate, TO:0000566 - stomatal frequency, TO:0000207 - plant height, TO:0006036 - stem elongation, TO:0000656 - root development trait, TO:0000278 - root to shoot ratio, TO:0000227 - root length, TO:0000447 - filled grain number, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0007057 - 0 seed germination stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007089 - stem elongation stage , PO:0007520 - root development stage ","Os01g0846300","LOC_Os01g62760.1"]
[{"$nulls":23},"Os01g0127900","Os09g0503100","Os11g0438700","Os11g0438700",1.5477895,-1.3608128,null,"Os09g0482900",4.221007,"Os04g0543700",-1.4760503,{"$nulls":29},"NBL3","OsNBL3","NATURAL BLIGHT LEAF 3 ","natural blight leaf 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0008219 - cell death, GO:0009628 - response to abiotic stimulus, GO:0009607 - response to biotic stimulus, GO:0007005 - mitochondrion organization, GO:0000365 - nuclear mRNA trans splicing, via spliceosome, GO:0045292 - nuclear mRNA cis splicing, via spliceosome, GO:0005739 - mitochondrion, GO:0003729 - mRNA binding, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009738 - abscisic acid mediated signaling, GO:0010150 - leaf senescence, GO:0070265 - necrotic cell death, GO:0010230 - alternative respiration","TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000168 - abiotic stress trait, TO:0000179 - biotic stress trait, TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000442 - plant fresh weight, TO:0000516 - relative root length","PO:0001054 - 4 leaf senescence stage ","Os03g0159700","LOC_Os03g06370.2, LOC_Os03g06370.1",{"$nulls":7},"SMG1","OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6","SMALL GRAIN 1","MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11",2," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0008283 - cell proliferation, GO:0050832 - defense response to fungus, GO:0009741 - response to brassinosteroid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009690 - cytokinin metabolic process, GO:0009611 - response to wounding, GO:0045595 - regulation of cell differentiation, GO:0009742 - brassinosteroid mediated signaling, GO:0009751 - response to salicylic acid stimulus, GO:0048364 - root development, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009409 - response to cold, GO:0009743 - response to carbohydrate stimulus, GO:0080027 - response to herbivore, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0010229 - inflorescence development, GO:0000165 - MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus","TO:0000454 - stem borer resistance, TO:0000396 - grain yield, TO:0002669 - diterpenoid phytoalexin content, TO:0000615 - abscisic acid sensitivity, TO:0000397 - grain size, TO:0000439 - fungal disease resistance, TO:0000447 - filled grain number, TO:0002677 - brassinosteroid sensitivity, TO:0002660 - cytokinin content, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000734 - grain length","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage ","Os02g0787300","LOC_Os02g54600.1",{"$nulls":6},"SAPK3","OsSAPK3, REK, OsSnRK2.3, SnRK2.3","STRESS/ABA-ACTIVATED PROTEIN KINASE 3","stress/ABA-activated protein kinase 3, rice endosperm protein kinase, Stress-Activated Protein Kinase 3, Sucrose nonfermenting-1-related protein kinase 2.3",10," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009738 - abscisic acid mediated signaling, GO:0005737 - cytoplasm, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium","TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000095 - osmotic response sensitivity",null,"Os10g0564500","LOC_Os10g41490.1, LOC_Os10g41490.2, LOC_Os10g41490.3",{"$nulls":6},"GLP8-12","OsGLP8-12","GERMIN-LIKE PROTEIN 8-12","Germin-like protein 8-12",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0048046 - apoplast, GO:0050832 - defense response to fungus, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0009414 - response to water deprivation, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009723 - response to ethylene stimulus, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance",null,"Os08g0231400","LOC_Os08g13440.3, LOC_Os08g13440.2, LOC_Os08g13440.1","Os06g0264200","Os07g0673400","Os04g0644400",9.671291,0,null,"EBS","OsEBS","ENHANCING BIOMASS AND SPIKELET NUMBER","enhancing biomass and spikelet number",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0008283 - cell proliferation","TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000457 - total biomass yield, TO:0000449 - grain yield per plant, TO:0000456 - spikelet number","PO:0025034 - leaf ","Os05g0591400","LOC_Os05g51360.1"]
[{"$nulls":23},"Os01g0130400","Os03g0841800","Os02g0608600","Os02g0608600",1.5360166,1.8741177,null,"Os05g0456900",4.2179737,"Os09g0420800",-1.4746151,{"$nulls":29},"ALS3","OsALS3","ALBINO SEEDLING LETHALITY 3","albino seedling lethality3",1," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0003729 - mRNA binding, GO:0010239 - chloroplast mRNA processing, GO:0009658 - chloroplast organization, GO:0009793 - embryonic development ending in seed dormancy","TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content","PO:0005426 - chlorenchyma , PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009047 - stem ","Os01g0674700","LOC_Os01g48380.2, LOC_Os01g48380.1",{"$nulls":7},"IEZ1","OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718, DLN84, OsDLN84","ENHANCER OF ZESTE 1","indica Enhancer of Zeste 1, SET protein 15, DLN repressor 84, DLN motif protein 84",3," Reproductive organ - Heading date,  Seed,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009960 - endosperm development, GO:0031519 - PcG protein complex, GO:0003727 - single-stranded RNA binding, GO:0048575 - short-day photoperiodism, flowering, GO:0003677 - DNA binding, GO:0006349 - genetic imprinting, GO:0048587 - regulation of short-day photoperiodism, flowering, GO:0009790 - embryonic development","TO:0002616 - flowering time, TO:0000428 - callus induction","PO:0020056 - tegmen , PO:0009089 - endosperm ","Os03g0307800","LOC_Os03g19480.1",{"$nulls":6},"TRAB1","OsbZIP66, OsABF5, Osbzip66, OsTRAB1, bZIP66, ABF5","TRANSCRIPTION FACTOR RESPONSIBLE FOR ABA REGULATION 1","basic region leucine zipper factor TRAB1, basic domain/Leu zipper factor TRAB1, transcription factor responsible for ABA regulation 1, bZIP transcription factor 66",8," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0043565 - sequence-specific DNA binding, GO:0046983 - protein dimerization activity, GO:0003700 - transcription factor activity, GO:0010029 - regulation of seed germination, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os08g0472000","LOC_Os08g36790.1",{"$nulls":6},"GLP8-2","OsGLP8-2, GER3, OsGER3, GLP16, OsEnS-117","GERMIN-LIKE PROTEIN 8-2","Germin-like protein 8-2, Germin-like protein 3, Germin-like protein 16, endosperm-specific gene 117",8," Seed,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity, GO:0030145 - manganese ion binding, GO:0048046 - apoplast","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0189100","LOC_Os08g08960.1","Os03g0786400","Os08g0443800","Os05g0469600",8.226357,0,null,"VQ4","OsVQ4","VQ-MOTIF PROTEIN 4","VQ motif-containing protein 4, valine-glutamine protein 4",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051091 - positive regulation of transcription factor activity","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0808900","LOC_Os01g59410.1"]
[{"$nulls":23},"Os01g0618900","Os05g0232200","Os05g0481000","Os05g0481000",1.526935,1.9932986,null,"Os05g0585400",4.212509,"Os05g0496400",-1.4738307,{"$nulls":29},"GW10","OsGW10","GRAIN WIDTH 10","Grain Width gene on chromosome 10",10," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0009742 - brassinosteroid mediated signaling, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000397 - grain size, TO:0000124 - flag leaf angle, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0002759 - grain number, TO:0002677 - brassinosteroid sensitivity",null,"Os10g0515400","LOC_Os10g37120.1",{"$nulls":7},"FIE1","OsFIE1, OsWD40-154, OsEnS-116, OsFIE1/OsWD40-154, WD40-154","FERTILIZATION-INDEPENDENT ENDOSPERM 1","FERTILIZATION-INDEPENDENT ENDOSPERM1, Fertilization-Independent Endosperm 1, dwarf and flower aberrant mutant, endosperm-specific gene 116",8," Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016571 - histone methylation, GO:0043078 - polar nucleus, GO:0000003 - reproduction, GO:0010342 - cellularization of endosperm, GO:0006349 - genetic imprinting, GO:0048316 - seed development, GO:0009409 - response to cold, GO:0009790 - embryonic development","TO:0000455 - seed set percent, TO:0000653 - seed development trait, TO:0002653 - endosperm storage protein content, TO:0002673 - amino acid content, TO:0000391 - seed size","PO:0020056 - tegmen , PO:0001170 - seed development stage , PO:0009089 - endosperm ","Os08g0137250","LOC_Os08g04290.1",{"$nulls":6},"TAD1","TAD1, OsCCS52A, TE, OsWD40-61, TAD1/TE, CCS52A1","TILLERING AND DWARF 1","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0010030 - positive regulation of seed germination, GO:0032877 - positive regulation of DNA endoreduplication, GO:0042023 - DNA endoreduplication, GO:0010091 - trichome branching, GO:0010082 - regulation of root meristem growth, GO:0048507 - meristem development, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0016049 - cell growth, GO:0005737 - cytoplasm","TO:0000329 - tillering ability, TO:0002692 - root meristem development, TO:0000656 - root development trait, TO:0000615 - abscisic acid sensitivity, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000166 - gibberellic acid sensitivity","PO:0005029 - root primordium , PO:0009005 - root , PO:0006085 - root meristem , PO:0007520 - root development stage , PO:0007057 - 0 seed germination stage ","Os03g0123300","LOC_Os03g03150.1, LOC_Os03g03150.2",{"$nulls":6},"GLP8-5","OsGLP8-5","GERMIN-LIKE PROTEIN 8-5","Germin-like protein 8-5",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0048046 - apoplast, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,null,"Os08g0189400","LOC_Os08g08990.1","Os11g0182500","Os10g0390500","Os02g0814200",8.182705,0,null,"HT","OsHT, OsLHT1, LHT1","HISTIDINE TRANSPORTER","Histidine Transporter, lysine and histidine transporter 1, lysine-histidine-like transporter 1, Lysine/Histidine transporter 1, Lysine-Histidine-type Transporter 1",8," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0009536 - plastid, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042886 - amide transport, GO:0015800 - acidic amino acid transport, GO:0010233 - phloem transport, GO:0048367 - shoot development, GO:0006865 - amino acid transport, GO:0005886 - plasma membrane, GO:0019740 - nitrogen utilization, GO:0043090 - amino acid import","TO:0000409 - peak viscosity, TO:0000207 - plant height, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000371 - yield trait, TO:0000576 - stem length, TO:0000346 - tiller number, TO:0000654 - shoot development trait, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0002673 - amino acid content, TO:0000598 - protein content, TO:0000455 - seed set percent, TO:0000138 - brown rice protein, TO:0000430 - germination rate, TO:0000653 - seed development trait, TO:0000196 - amylose content, TO:0000379 - cool paste viscosity, TO:0000621 - inflorescence development trait","PO:0006036 - root epidermis , PO:0025413 - primary leaf vein , PO:0020138 - leaf lamina vein , PO:0025261 - pericycle cell , PO:0005059 - root endodermis , PO:0005427 - sclerenchyma , PO:0005772 - exodermis , PO:0000048 - leaf lamina vascular system , PO:0020124 - root stele , PO:0000258 - root cortex , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0020104 - leaf sheath , PO:0025395 - floral organ , PO:0025066 - stalk , PO:0005020 - vascular bundle , PO:0009005 - root , PO:0009047 - stem , PO:0020103 - flag leaf , PO:0025034 - leaf ","Os08g0127100","LOC_Os08g03350.1"]
[{"$nulls":23},"Os01g0633100","Os07g0475700","Os12g0578400","Os12g0578400",1.5109471,1.2891626,null,"Os10g0574400",4.2110896,"Os03g0582200",-1.4735543,{"$nulls":29},"V14","OsV14","VIRESCENT 14","virescent-14",7," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0010343 - singlet oxygen-mediated programmed cell death, GO:0048367 - shoot development, GO:0048364 - root development, GO:0009651 - response to salt stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006353 - transcription termination, GO:0032502 - developmental process, GO:0003690 - double-stranded DNA binding, GO:0015979 - photosynthesis, GO:0009266 - response to temperature stimulus, GO:0009658 - chloroplast organization, GO:0009416 - response to light stimulus","TO:0000432 - temperature response trait, TO:0000326 - leaf color, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0002715 - chloroplast development trait","PO:0025034 - leaf ","Os07g0583200","LOC_Os07g39430.1",{"$nulls":7},"BLS1","OsBLS1, OsG1L6, G1L6, TH1, OsTH1, TH1/BSG1/BLS1/AFD1, BSG1, OsBSG1, AFD1, OsAFD1, BH1, OsBH1","BEAK LIKE SPIKELET 1","G1 LIKE PROTEIN 6, TRIANGULAR HULL1, TRIANGULAR HULL 1, BEAK LIKE SPIKELET1, abnormal ower and dwarf1, beak-shaped grain1, BEAK-SHAPED GRAIN 1, ABNORMAL FLOWER AND DWARF 1",2," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009416 - response to light stimulus, GO:0009299 - mRNA transcription, GO:0008361 - regulation of cell size, GO:0007275 - multicellular organismal development, GO:0001558 - regulation of cell growth, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0051302 - regulation of cell division, GO:0048437 - floral organ development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility, TO:0000564 - spikelet width, TO:0000590 - grain weight, TO:0000145 - internode length, TO:0002762 - width of grain with hull, TO:0006011 - lodicule shape, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000421 - pollen fertility, TO:0000397 - grain size, TO:0002730 - grain shape","PO:0009049 - inflorescence , PO:0009037 - lemma , PO:0009038 - palea , PO:0001083 - inflorescence development stage , PO:0025585 - floral organ formation stage , PO:0020032 - plumule , PO:0020104 - leaf sheath , PO:0001048 - palea development stage , PO:0001047 - lemma development stage ","Os02g0811000","LOC_Os02g56610.1",{"$nulls":6},"_","SIP2, OsSIP2, OsFIP, FIP","_","SKIP interacting protein 2, SKIPa-interacting protein 2, SKIPa-interacting protein 2",6," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009506 - plasmodesma, GO:0007276 - gamete generation, GO:0009556 - microsporogenesis, GO:0000278 - mitotic cell cycle, GO:0005634 - nucleus, GO:0005856 - cytoskeleton, GO:0006396 - RNA processing, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0001510 - RNA methylation, GO:0009790 - embryonic development, GO:0048236 - plant-type spore development","TO:0000437 - male sterility, TO:0000727 - sporogenesis, TO:0000620 - embryo development trait, TO:0000445 - seed number, TO:0000180 - spikelet fertility, TO:0000455 - seed set percent, TO:0000531 - anther length, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000485 - sterility related trait","PO:0007631 - plant embryo stage , PO:0020048 - microspore , PO:0025543 - tapetum cell ","Os06g0474200 ","LOC_Os06g27970.1",{"$nulls":6},"GLP8-6","OsGLP8-6","GERMIN-LIKE PROTEIN 8-6","Germin-like protein 8-6",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,null,"Os08g0189500","LOC_Os08g09000.1","Os01g0802000","Os08g0374000","Os10g0437500",7.707684,0,null,"WOX9C","OsWOX9C, DWL2, OsDWL2, DWL2/WOX9C","WUSCHEL-LIKE HOMEOBOX 9C","WUSCHEL-related homeobox 9C, DWT-LIKE 2",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000346 - tiller number, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000145 - internode length","PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os05g0564500","LOC_Os05g48990.1"]
[{"$nulls":23},"Os01g0636500","Os04g0305700","Os02g0296800","Os02g0296800",1.4630122,1.9466571,null,"Os09g0262000",4.210138,"Os02g0140500",-1.4686095,{"$nulls":29},"UGT74J1","OsUGT74J1","UDP-GLUCOSYLTRANSFERASE 74J1","UDP-glucosyltransferase 74J1",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Plant growth activity","GO:0008194 - UDP-glycosyltransferase activity, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0050832 - defense response to fungus, GO:0009696 - salicylic acid metabolic process","TO:0000135 - leaf length, TO:0002689 - leaf sheath length, TO:0000476 - growth hormone content, TO:0000137 - days to heading, TO:0000074 - blast disease, TO:0000207 - plant height","PO:0025034 - leaf , PO:0000003 - whole plant ","Os04g0206700","LOC_Os04g12980.1",{"$nulls":7},"EP3","EP3/LP, LP, OsLP, OsFbox076, OsFbox76, Os_F0106, OsEP3","ERECT PANICLE 3","LARGER PANICLE, F-box protein 76",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0048513 - organ development, GO:0048437 - floral organ development, GO:0048316 - seed development, GO:0005737 - cytoplasm, GO:0009908 - flower development, GO:0010118 - stomatal movement, GO:0009760 - C4 photosynthesis, GO:0010052 - guard cell differentiation, GO:0005634 - nucleus","TO:0000391 - seed size, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0006029 - glume number, TO:0000225 - stamen number, TO:0002768 - spikelet length, TO:0000564 - spikelet width, TO:0000371 - yield trait, TO:0000269 - 100-seed weight, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000625 - spikelet density, TO:0000531 - anther length, TO:0006013 - carpel number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0006022 - floral organ development trait, TO:0000370 - leaf width, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0002600 - flower organ size, TO:0000397 - grain size, TO:0000357 - growth and development trait, TO:0006038 - floral organ number, TO:0000622 - flower development trait, TO:0000421 - pollen fertility","PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0006036 - root epidermis , PO:0020123 - root cap , PO:0009013 - portion of meristem tissue , PO:0020127 - primary root , PO:0009046 - flower , PO:0009010 - seed , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0025585 - floral organ formation stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage ","Os02g0260200","LOC_Os02g15950.1",{"$nulls":6},"MYBS1","OsMYBS1, Os-MYBS1, Mybs1","TRANSCRIPTION FACTOR MYBS1","transcription factor MYBS1",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0046686 - response to cadmium ion, GO:0003682 - chromatin binding, GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0003677 - DNA binding, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009743 - response to carbohydrate stimulus, GO:0050832 - defense response to fungus","TO:0000253 - seed dormancy, TO:0000074 - blast disease, TO:0000280 - seedling vigor, TO:0000168 - abiotic stress trait",null,"Os01g0524500","LOC_Os01g34060.1",{"$nulls":6},"GLP8-7","OsGLP8-7, GER6, OsRGLP2, RGLP2","GERMIN-LIKE PROTEIN 8-7","Germin-like protein 8-7, Germin-like protein 6, germin-like protein gene 2, Root GLP 2, root GLP2, root Germin-like protein 2",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0009651 - response to salt stress, GO:0048046 - apoplast, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0034059 - response to anoxia, GO:0002213 - defense response to insect, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0002242 - defense response to parasitic plant, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity","TO:0000315 - bacterial disease resistance, TO:0000444 - parasitic weed, TO:0000074 - blast disease, TO:0000015 - oxygen sensitivity, TO:0000303 - cold tolerance, TO:0000424 - brown planthopper resistance, TO:0000439 - fungal disease resistance, TO:0000605 - hydrogen peroxide content, TO:0006001 - salt tolerance, TO:0000168 - abiotic stress trait, TO:0000112 - disease resistance, TO:0000249 - leaf senescence, TO:0000188 - drought sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000075 - light sensitivity, TO:0000401 - plant growth hormone sensitivity","PO:0009010 - seed ","Os08g0189600","LOC_Os08g09010.1","Os07g0411200","Os02g0811800","Os06g0653000",7.6015506,0,null,"CYP19-4","OsCYP19-4, OsCYP-16, OsCYP19-3, OsCYP19-4.1, OsCYP19-4.2, OsCYP19-4.3, OsCYP19-4.4, OsCYP19-4.5, OsCYP19-4.6, OsCYP19-4.7, OsCYP19-4.8","CYCLOPHILIN 19-4","cyclophilin 19-4, cyclophilin 16",6," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009734 - auxin mediated signaling pathway, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0005771 - multivesicular body, GO:0009507 - chloroplast, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0006457 - protein folding, GO:0005886 - plasma membrane, GO:0048046 - apoplast, GO:0042542 - response to hydrogen peroxide, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0005829 - cytosol, GO:0048364 - root development, GO:0005795 - Golgi stack, GO:0005783 - endoplasmic reticulum","TO:0000303 - cold tolerance, TO:0000329 - tillering ability, TO:0000590 - grain weight, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000396 - grain yield",null,"Os06g0708400","LOC_Os06g49470.1"]
[{"$nulls":23},"Os01g0658700","Os06g0623300","Os09g0531900","Os09g0531900",1.4401788,1.6780645,null,"Os06g0696500",4.2091804,"Os03g0599800",-1.4671631,{"$nulls":29},"BIRG1","OsBIRG1","BIG RICE GRAIN 1",null,3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0055064 - chloride ion homeostasis, GO:0010431 - seed maturation, GO:0005886 - plasma membrane, GO:0042910 - xenobiotic transporter activity, GO:0016020 - membrane, GO:0022857 - transmembrane transporter activity, GO:0015297 - antiporter activity, GO:0001558 - regulation of cell growth, GO:0009651 - response to salt stress, GO:0015108 - chloride transmembrane transporter activity, GO:0015562 - efflux transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000734 - grain length, TO:0000057 - grain moisture, TO:0000598 - protein content, TO:0000696 - starch content, TO:0001015 - photosynthetic rate, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0000068 - lodging incidence, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000397 - grain size, TO:0006001 - salt tolerance","PO:0020104 - leaf sheath , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0020141 - stem node , PO:0009010 - seed , PO:0009005 - root , PO:0009047 - stem , PO:0007632 - seed maturation stage , PO:0009051 - spikelet , PO:0025281 - pollen , PO:0009030 - carpel , PO:0000293 - guard cell , PO:0025034 - leaf ","Os03g0858800","LOC_Os03g64150.1",{"$nulls":7},"JAR1","OsJAR1, OsGH3.5, GH3.5, OsGH3-5, GH3-5","JASMONYL-L-ISOLEUCINE SYNTHASE 1","jasmonyl-L-isoleucine synthase 1, JASMONATE RESISTANT 1, GRETCHEN HAGEN 3.5",5," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0046688 - response to copper ion, GO:0052315 - phytoalexin biosynthetic process, GO:0009695 - jasmonic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0080123 - jasmonate-amino synthetase activity, GO:0005773 - vacuole, GO:0009507 - chloroplast, GO:0009585 - red, far-red light phototransduction, GO:0009627 - systemic acquired resistance, GO:0009733 - response to auxin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009640 - photomorphogenesis, GO:0009694 - jasmonic acid metabolic process, GO:0009734 - auxin mediated signaling pathway, GO:0009861 - jasmonic acid and ethylene-dependent systemic resistance, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0010119 - regulation of stomatal movement, GO:0010193 - response to ozone, GO:0031348 - negative regulation of defense response, GO:0070566 - adenylyltransferase activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009901 - anther dehiscence, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000172 - jasmonic acid sensitivity, TO:0000164 - stress trait, TO:0000206 - leaf angle, TO:0002672 - auxin content, TO:0000179 - biotic stress trait, TO:0002668 - jasmonic acid content, TO:0002669 - diterpenoid phytoalexin content, TO:0000021 - copper sensitivity, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000420 - fertility related trait, TO:0000474 - glume opening, TO:0000609 - potassium content, TO:0006001 - salt tolerance","PO:0007616 - flowering stage , PO:0009066 - anther , PO:0009006 - shoot system ","Os05g0586200 ","LOC_Os05g50890.1, LOC_Os05g50890.3, LOC_Os05g50890.2",{"$nulls":6},"MYBS2","OsMYBS2","TRANSCRIPTION FACTOR MYBS2","transcription factor MYBS2",10," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009739 - response to gibberellin stimulus, GO:0033500 - carbohydrate homeostasis, GO:0009743 - response to carbohydrate stimulus, GO:0003677 - DNA binding, GO:0009408 - response to heat, GO:0009744 - response to sucrose stimulus, GO:0010187 - negative regulation of seed germination, GO:0009414 - response to water deprivation, GO:0047484 - regulation of response to osmotic stress, GO:0080050 - regulation of seed development, GO:0005634 - nucleus, GO:0045926 - negative regulation of growth, GO:0042594 - response to starvation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity","TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance, TO:0000590 - grain weight, TO:0000259 - heat tolerance, TO:0000449 - grain yield per plant",null,"Os10g0562100","LOC_Os10g41260.1",{"$nulls":6},"GLP8-8","OsGLP8-8","GERMIN-LIKE PROTEIN 8-8","Germin-like protein 8-8",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding",null,null,"Os08g0189700","LOC_Os08g09020.1","Os03g0280000","Os05g0589700","Os11g0499600",7.2071304,0,null,"CYP21-4","OsCYP21-4, OsCYP-19, OsCYP21-2a, OsCYP21-2b, OsCYP21-2c","CYCLOPHILIN 21-4","cyclophilin 21-4, cyclophilin 19",7," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0005794 - Golgi apparatus, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0042542 - response to hydrogen peroxide, GO:0006979 - response to oxidative stress, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0009651 - response to salt stress, GO:0006457 - protein folding","TO:0000371 - yield trait, TO:0006001 - salt tolerance, TO:0000143 - relative biomass, TO:0002657 - oxidative stress, TO:0000615 - abscisic acid sensitivity, TO:0000181 - seed weight",null,"Os07g0476500","LOC_Os07g29390.1, LOC_Os07g29390.2, LOC_Os07g29390.3"]
[{"$nulls":23},"Os01g0715400","Os10g0467800","Os04g0611800","Os04g0611800",1.4300122,1.1875777,null,"Os05g0205800",4.208537,"Os04g0323500",-1.4655952,{"$nulls":29},"ZPR4","OsZPR4","LITTLE ZIPPER FAMILY PROTEIN 4","LITTLE ZIPPER family protein 4, LITTLE ZIPPER 4",12," Vegetative organ - Leaf","GO:0048366 - leaf development","TO:0000655 - leaf development trait","PO:0005020 - vascular bundle , PO:0001050 - leaf development stage , PO:0025127 - primordium , PO:0025275 - procambium , PO:0020148 - shoot apical meristem ","Os12g0151600","LOC_Os12g05560.1",{"$nulls":7},"EG2","OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, JAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2","EXTRA GLUME 2","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 10, extra glume 2, TIFY gene 3",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010582 - floral meristem determinacy, GO:0048449 - floral organ formation, GO:0031347 - regulation of defense response","TO:0000172 - jasmonic acid sensitivity, TO:0000657 - spikelet anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000040 - panicle length",null,"Os04g0653000","LOC_Os04g55920.5, LOC_Os04g55920.1, LOC_Os04g55920.2",{"$nulls":6},"ARF6B","OsARF6b, OsARF25, ARF25","AUXIN RESPONSE FACTOR 6B","auxin response factor-6B, auxin response factor 6B, auxin response factor-25, auxin response factor 25",12," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0009926 - auxin polar transport, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress","TO:0000567 - tiller angle, TO:0002693 - gravity response trait, TO:0000734 - grain length, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000207 - plant height","PO:0020039 - leaf lamina , PO:0009005 - root , PO:0025034 - leaf ","Os12g0613700","LOC_Os12g41950.1",{"$nulls":6},"GLP8-9","OsGLP8-9","GERMIN-LIKE PROTEIN 8-9","Germin-like protein 8-9",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast",null,null,"Os08g0189850","LOC_Os08g09040.1","Os04g0459000","Os07g0208500","Os11g0141900",6.828964,0,null,"BZIP1","OsbZIP01, OsbZIP1, OsRE1, RE1","b-ZIP TRANSCRIPTION FACTOR 1","b-ZIP transcription factor 01, regulator of Ehd1",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0048573 - photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0025034 - leaf ","Os01g0174000","LOC_Os01g07880.1"]
[{"$nulls":23},"Os01g0739700","Os06g0289900","Os07g0679300","Os07g0679300",1.2756686,1.3046592,null,"Os11g0440200",4.208147,"Os03g0214100",-1.4651551,{"$nulls":29},"_",null,"_","WD40-repeat transcription factor",11," Vegetative organ - Leaf,  Coloration - Anthocyanin","GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0006913 - nucleocytoplasmic transport","TO:0000326 - leaf color",null,"Os11g0132700","LOC_Os11g03794.1",{"$nulls":7},"BHLH9","OsbHLH009, bHLH009, OsMYC2, MYC2","BASIC HELIX-LOOP-HELIX PROTEIN 9","basic helix-loop-helix protein 009, Myelocytomatosis oncogene transcription factor 2",10," Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009742 - brassinosteroid mediated signaling, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0006952 - defense response, GO:0009269 - response to desiccation, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0010200 - response to chitin, GO:0043619 - regulation of transcription from RNA polymerase II promoter in response to oxidative stress, GO:0009718 - anthocyanin biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009689 - induction of phytoalexin biosynthetic process, GO:0002213 - defense response to insect, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010150 - leaf senescence, GO:0051090 - regulation of transcription factor activity, GO:0009646 - response to absence of light, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0031348 - negative regulation of defense response, GO:0010100 - negative regulation of photomorphogenesis, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0046983 - protein dimerization activity, GO:0003677 - DNA binding","TO:0002677 - brassinosteroid sensitivity, TO:0000148 - viral disease resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000657 - spikelet anatomy and morphology trait, TO:0000261 - insect damage resistance, TO:0000249 - leaf senescence, TO:0000075 - light sensitivity, TO:0000495 - chlorophyll content, TO:0000621 - inflorescence development trait, TO:0000112 - disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000276 - drought tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0001054 - 4 leaf senescence stage , PO:0001083 - inflorescence development stage , PO:0009047 - stem ","Os10g0575000","LOC_Os10g42430.1",{"$nulls":6},"ARF2","OsARF2, OsARF4, ARF4","AUXIN RESPONSE FACTOR 2","auxin response factor-2, auxin response factor 2, auxin response factor-4, auxin response factor 4",1," Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0048316 - seed development, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0010928 - regulation of auxin mediated signaling pathway","TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os01g0927600","LOC_Os01g70270.4, LOC_Os01g70270.3, LOC_Os01g70270.2, LOC_Os01g70270.1",{"$nulls":6},"AGPL2","OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2, GIF2, GAS1","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 2","sativa ADP-glucose pyrophosphorylase large subunit 2, ADP-glucose Pyrophosphorylase large subunit 2, AGPase large subunit 2, AGPase large unit 2, ADP-glucose pyrophosphorylase subunit SH2, GRAIN INCOMPLETE FILLING 2",1," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005978 - glycogen biosynthetic process, GO:0009058 - biosynthetic process, GO:0009536 - plastid, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0010431 - seed maturation, GO:0048316 - seed development, GO:0016779 - nucleotidyltransferase activity, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0010581 - regulation of starch biosynthetic process","TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0006001 - salt tolerance, TO:0000104 - floury endosperm, TO:0000162 - seed quality, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000100 - shrunken endosperm","PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0009001 - fruit , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os01g0633100","LOC_Os01g44220.3, LOC_Os01g44220.4, LOC_Os01g44220.7, LOC_Os01g44220.6, LOC_Os01g44220.5, LOC_Os01g44220.1, LOC_Os01g44220.2","Os05g0137200","Os07g0184800","Os06g0142350",6.547705,0,null,"GS2","OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2, GS2/GL2, LGS1, OsLGS1","GRAIN SIZE 2","growth-regulating factor4, Growth-Regulating Factor 4, GRAIN SIZE ON CHROMOSOME 2, PANICLE TRAITS 2, grain length and width 2, Large Grain Size 1",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009755 - hormone-mediated signaling, GO:0009409 - response to cold, GO:0030307 - positive regulation of cell growth, GO:0030308 - negative regulation of cell growth, GO:0080006 - internode patterning, GO:0040008 - regulation of growth, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0009739 - response to gibberellin stimulus, GO:0051302 - regulation of cell division, GO:0002213 - defense response to insect, GO:0051781 - positive regulation of cell division, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0051510 - regulation of unidimensional cell growth","TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000653 - seed development trait, TO:0000271 - inflorescence length, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000473 - grain shattering, TO:0000734 - grain length, TO:0000621 - inflorescence development trait, TO:0000166 - gibberellic acid sensitivity, TO:0000382 - 1000-seed weight, TO:0000424 - brown planthopper resistance, TO:0000040 - panicle length, TO:0000303 - cold tolerance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000402 - grain width, TO:0000074 - blast disease, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0701300","LOC_Os02g47280.2, LOC_Os02g47280.1"]
[{"$nulls":23},"Os01g0750300","Os03g0401300","Os10g0569100","Os10g0569100",1.2666517,1.0685878,null,"Os01g0282800",4.207867,"Os10g0567000",-1.4640685,{"$nulls":29},"_",null,"_","MYB transcription factor",8," Vegetative organ - Leaf,  Coloration - Anthocyanin","GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0003677 - DNA binding","TO:0000326 - leaf color",null,"Os08g0428200","LOC_Os08g33150.1",{"$nulls":7},"MOC1","moc1, OsMOC1, OsGRAS-33, OsGRAS33, GRAS-33, GRAS33","MONOCULM 1","monoculm1, Monoculm 1, Protein MONOCULM 1, GRAS protein 33",6," Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009739 - response to gibberellin stimulus, GO:0045449 - regulation of transcription, GO:0010075 - regulation of meristem growth, GO:0009737 - response to abscisic acid stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0030528 - transcription regulator activity, GO:0010229 - inflorescence development, GO:0010014 - meristem initiation, GO:0006350 - transcription, GO:0048364 - root development","TO:0000166 - gibberellic acid sensitivity, TO:0000547 - primary branch number, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000656 - root development trait, TO:0000501 - spikelet weight, TO:0000207 - plant height","PO:0008039 - stem base , PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0000232 - axillary bud meristem , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006343 - axillary shoot system ","Os06g0610300","LOC_Os06g40780.1",{"$nulls":6},"ARF10","OsARF10, OsARF18, ARF18","AUXIN RESPONSE FACTOR 10","auxin response factor-10, auxin response factor 10, auxin response factor-18, auxin response factor 18",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Other","GO:0009908 - flower development, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0010481 - epidermal cell division, GO:0048316 - seed development, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000181 - seed weight, TO:0000149 - seed width, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000135 - leaf length, TO:0000346 - tiller number, TO:0000655 - leaf development trait, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000696 - starch content, TO:0002655 - starch grain size, TO:0000180 - spikelet fertility","PO:0007615 - flower development stage , PO:0001170 - seed development stage ","Os06g0685700","LOC_Os06g47150.1, LOC_Os06g47150.2, LOC_Os06g47150.3, LOC_Os06g47150.4",{"$nulls":6},"AGPL3","OsAGPL3, APL3, OsAPL3, AGPlar, OsAGPL1, AGPL1","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 3","sativa ADP-glucose pyrophosphorylase large subunit 3, ADP-glucose Pyrophosphorylase large subunit 3, AGPase large subunit 3, AGPase large unit 1, AGPase L1",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009058 - biosynthetic process, GO:0019252 - starch biosynthetic process, GO:0009413 - response to flooding, GO:0016779 - nucleotidyltransferase activity, GO:0009536 - plastid","TO:0000286 - submergence sensitivity","PO:0009089 - endosperm ","Os05g0580000","LOC_Os05g50380.2, LOC_Os05g50380.1","Os08g0167000","Os08g0280100","Os12g0138500",6.4889946,0,null,"GRF6","OsGRF6","GROWTH-REGULATING FACTOR 6","growth-regulating factor6, GROWTH REGULATING FACTOR 6",3," Biochemical character,  Vegetative organ - Culm,  Seed,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0051510 - regulation of unidimensional cell growth, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus","TO:0000653 - seed development trait, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000240 - sterile lemma length, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000074 - blast disease, TO:0000620 - embryo development trait","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0009009 - plant embryo ","Os03g0729500","LOC_Os03g51970.1"]
[{"$nulls":23},"Os01g0851700","Os04g0513900","Os08g0424200","Os08g0424200",1.2188755,1.2270833,null,"Os10g0567900",4.2013416,"Os12g0194100",-1.4625425,{"$nulls":29},"SCYL2","OsSCYL2","SCY1-LIKE 2","SCY1-LIKE2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030136 - clathrin-coated vesicle, GO:0005524 - ATP binding, GO:0006898 - receptor-mediated endocytosis, GO:0009658 - chloroplast organization, GO:0004672 - protein kinase activity, GO:0045088 - regulation of innate immune response, GO:0005794 - Golgi apparatus, GO:0005802 - trans-Golgi network, GO:0016192 - vesicle-mediated transport, GO:0009416 - response to light stimulus, GO:0010941 - regulation of cell death, GO:0042742 - defense response to bacterium, GO:0010150 - leaf senescence, GO:0010728 - regulation of hydrogen peroxide biosynthetic process","TO:0000734 - grain length, TO:0000075 - light sensitivity, TO:0000063 - mimic response, TO:0000316 - photosynthetic ability, TO:0000315 - bacterial disease resistance, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000605 - hydrogen peroxide content, TO:0000325 - soluble protein content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000175 - bacterial blight disease resistance","PO:0009005 - root , PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath ","Os01g0616100","LOC_Os01g42950.2, LOC_Os01g42950.1",{"$nulls":7},"ALDH2A","OsALDH2a, ALDH2a, Aldh2a, OsSTA73, OsALDH2B5, ALDH2B5","ALDEHYDE DEHYDROGENASE 2A","aldehyde dehydrogenase 2a, Aldehyde dehydrogenase 2B5",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009751 - response to salicylic acid stimulus, GO:0005739 - mitochondrion, GO:0030912 - response to deep water, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, GO:0009635 - response to herbicide, GO:0009629 - response to gravity, GO:0009415 - response to water, GO:0009413 - response to flooding","TO:0002693 - gravity response trait, TO:0000058 - herbicide sensitivity, TO:0000286 - submergence sensitivity","PO:0009066 - anther ","Os02g0730000","LOC_Os02g49720.1, LOC_Os02g49720.2, LOC_Os02g49720.3, LOC_Os02g49720.6, LOC_Os02g49720.7",{"$nulls":6},"ASP1","OsLIS-L1, OsWD40-155, ASP1, TPR2, OsTPR2, OsREL2, REL2, OsTPL3, TPL3, OsTPL2, TPL2, ASP-LSL","ABERRANT SPIKELET AND PANICLE 1","Lissencephaly type-1-like 1, ABERRANT SPIKELET AND PANICLE1, TOPLESS-RELATED PROTEIN 2, TOPLESS 3, aberrant spikelet-long sterile lemma, ROMOSA ENHANCER LOCI2",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0010073 - meristem maintenance, GO:0003714 - transcription corepressor activity, GO:0010229 - inflorescence development, GO:0019827 - stem cell maintenance, GO:0009734 - auxin mediated signaling pathway, GO:0010072 - primary shoot apical meristem specification, GO:0005634 - nucleus","TO:0002660 - cytokinin content, TO:0002672 - auxin content, TO:0000040 - panicle length, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0000145 - internode length, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000240 - sterile lemma length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000050 - inflorescence branching, TO:0000152 - panicle number, TO:0002768 - spikelet length, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0002727 - sterile lemma width, TO:0020033 - glume length, TO:0020034 - glume width, TO:0000371 - yield trait, TO:0000621 - inflorescence development trait, TO:0000650 - lemma length, TO:0002675 - gibberellic acid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os08g0162100","LOC_Os08g06480.1",{"$nulls":6},"AGPS1","OsAGPS1, APS1, OsAPS1, AGPsma","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1","sativa ADP-glucose pyrophosphorylase small subunit 1, ADP-glucose Pyrophosphorylase small subunit 1, AGPase small subunit 1, Adenosine diphosphate glucose pyrophosphorylase, adenosine diphosphoglucose pyrophosphorylase, ADP-glucose pyrophosphorylase small unit 1, AGPase S1",9," Biochemical character,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0019252 - starch biosynthetic process, GO:0009413 - response to flooding, GO:0009536 - plastid, GO:0009058 - biosynthetic process, GO:0009501 - amyloplast, GO:0016779 - nucleotidyltransferase activity","TO:0000286 - submergence sensitivity, TO:0000266 - chalky endosperm","PO:0009089 - endosperm ","Os09g0298200","LOC_Os09g12660.2, LOC_Os09g12660.1","Os01g0770500","Os02g0813600","Os02g0767300",6.4490943,0,null,"DPS1","OsCBSDUF1, OsCBSDUF1a, OsCBSDUF1b, CBSDUF1, CBSDUF1a, CBSDUF1b","DEGENERATED PANICLE AND PARTIAL STERILITY 1","cystathionine b-synthase domain containing protein OsCBSDUF1, CBS domain containing protein OsCBSDUF1",5," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010025 - wax biosynthetic process, GO:0042542 - response to hydrogen peroxide, GO:0010143 - cutin biosynthetic process, GO:0006631 - fatty acid metabolic process, GO:0043069 - negative regulation of programmed cell death, GO:0016209 - antioxidant activity, GO:0010229 - inflorescence development, GO:0042335 - cuticle development, GO:0048653 - anther development, GO:0005739 - mitochondrion","TO:0002657 - oxidative stress, TO:0000657 - spikelet anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000187 - anther color, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility","PO:0001004 - anther development stage , PO:0001083 - inflorescence development stage , PO:0009066 - anther ","Os05g0395300","LOC_Os05g32850.2, LOC_Os05g32850.1"]
[{"$nulls":23},"Os01g0860800","Os11g0113700","Os06g0704600","Os06g0704600",1.2104546,1.337017,null,"Os04g0551200",4.201263,"Os12g0460100",-1.4610349,{"$nulls":29},"UGT85E1","OsUGT85E1","UDP-DEPENDENT GLYCOSYLTRANSFERASE 85E1","Uridine diphosphate-dependent glycosyltransferase 85E1, UDP-dependent glycosyltransferase 85E1",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0008194 - UDP-glycosyltransferase activity, GO:0009414 - response to water deprivation, GO:0010115 - regulation of abscisic acid biosynthetic process","TO:0000227 - root length, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000520 - stomatal closure rate, TO:0002667 - abscisic acid content, TO:0000131 - leaf water potential, TO:0002657 - oxidative stress, TO:0006002 - proline content, TO:0000333 - sugar content, TO:0000340 - total soluble sugar content",null,"Os02g0755500","LOC_Os02g51900.1",{"$nulls":7},"GN1A","Gn1a, OsCKX2, CKX2, ckx2, Gn1a/OsCKX2, Os CKX2, CKX2/Gn1a","GRAIN NUMBER 1A","Cytokinin oxidase/dehydrogenase 2, grain number 1a, cytokinin oxidase 2, Grain number 1a/Cytokinin oxidase 2, Grain number 1 a",1," Biochemical character,  Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0032940 - secretion by cell, GO:0022900 - electron transport chain, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0019139 - cytokinin dehydrogenase activity, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress","TO:0000495 - chlorophyll content, TO:0000128 - harvest index, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000382 - 1000-seed weight, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000296 - vegetative vigor, TO:0000440 - grain number per plant, TO:0000136 - relative water content, TO:0000152 - panicle number, TO:0000496 - carotenoid content, TO:0000621 - inflorescence development trait, TO:0000052 - primary branching of inflorescence, TO:0000456 - spikelet number, TO:0000142 - secondary branching of inflorescence, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000467 - cell membrane stability, TO:0000050 - inflorescence branching","PO:0000230 - inflorescence meristem , PO:0001083 - inflorescence development stage ","Os01g0197700 ","LOC_Os01g10110.1",{"$nulls":6},"CYP20-2","OsCYP20-2, OsCYP-11, OsNuCYP20-2","CYCLOPHILIN 20-2","cyclophilin 20-2, rice thylakoid lumenal cyclophilin OsCYP20-2, cyclophilin 11",5," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth, GO:0009409 - response to cold, GO:0009533 - chloroplast stromal thylakoid, GO:0006457 - protein folding, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0080050 - regulation of seed development, GO:0009535 - chloroplast thylakoid membrane, GO:0009543 - chloroplast thylakoid lumen, GO:0010275 - NAD(P)H dehydrogenase complex assembly, GO:0000245 - spliceosome assembly, GO:0009507 - chloroplast, GO:0005634 - nucleus","TO:0000303 - cold tolerance, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0000040 - panicle length, TO:0002730 - grain shape, TO:0000734 - grain length",null,"Os05g0103200","LOC_Os05g01270.1",{"$nulls":6},"ABI5","OsABI5, OsbZIP10, OsABF1, OREB1, OsABI5-1, OsABI5-2, OsOREB1, OREB1","ABA INSENSITIVE 5","ABA Insensitive 5, bZIP-type transcription factor ABI5, bZIP transcription factors OsABI5, bZIP transcription factor 10, Abscisic acid insensitive 5",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0030187 - melatonin biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0009845 - seed germination, GO:0009737 - response to abscisic acid stimulus, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0042744 - hydrogen peroxide catabolic process, GO:0009651 - response to salt stress, GO:0009725 - response to hormone stimulus, GO:0010152 - pollen maturation, GO:0009733 - response to auxin stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0010029 - regulation of seed germination, GO:0045449 - regulation of transcription, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000420 - fertility related trait, TO:0000615 - abscisic acid sensitivity, TO:0000483 - germinability at low temperature, TO:0000303 - cold tolerance, TO:0000401 - plant growth hormone sensitivity, TO:0000053 - pollen sterility, TO:0000429 - salt sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000253 - seed dormancy, TO:0000163 - auxin sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0009049 - inflorescence , PO:0020091 - obsolete microgametophyte ","Os01g0859300","LOC_Os01g64000.3, LOC_Os01g64000.2, LOC_Os01g64000.1","Os12g0291100","Os01g0908600","Os01g0795400",6.3875213,0,null,"MIS2","OsCR4, CR4, OsMIS2","MINI SEED 2","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog",3," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0051302 - regulation of cell division, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0001558 - regulation of cell growth, GO:0005768 - endosome","TO:0000399 - grain thickness, TO:0000240 - sterile lemma length, TO:0002730 - grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006022 - floral organ development trait, TO:0000621 - inflorescence development trait, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os03g0637800","LOC_Os03g43670.1"]
[{"$nulls":23},"Os01g0866400","Os10g0530500","Os06g0712500","Os06g0712500",1.2091128,1.5540142,null,"Os04g0460600",4.1927667,"Os02g0497700",-1.4602934,{"$nulls":29},"CSL1","OsCSL1, MKKK22, OsMKKK22","CHLOROSIS SEEDLING LETHALITY 1","chlorosis seedling lethality 1, MAPK kinase kinase22",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0009658 - chloroplast organization, GO:0005783 - endoplasmic reticulum, GO:0043473 - pigmentation","TO:0000326 - leaf color, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait",null,"Os03g0703400","LOC_Os03g49640.2, LOC_Os03g49640.1",{"$nulls":7},"LD(T)","ld(t)","LACK OF LODICULE","lack of lodicule",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0009856 - pollination, GO:0048461 - flower structural organization",{"$nulls":10},"SDR1","Sdr1*, Sdr1","SEED DORMANCY 1","Seed dormancy-1",3," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",{"$nulls":8},"AGO18","OsAGO18","ARGONAUTE 18","Protein argonaute 18, Argonaute18",7," Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Disease resistance,  Other","GO:0051607 - defense response to virus, GO:0031047 - gene silencing by RNA, GO:0007126 - meiosis, GO:0003676 - nucleic acid binding, GO:0005739 - mitochondrion","TO:0000148 - viral disease resistance","PO:0009066 - anther ","Os07g0471300","LOC_Os07g28850.1","Os12g0291400","Os07g0694400","Os08g0473600",6.2063766,0,null,"ERF48","OsERF#048, OsERF048, OsERF48, AP2/EREBP#170, AP2/EREBP170, OsDRAP1, DRAP1, OsERF48/OsDRAP1","ETHYLENE RESPONSE FACTOR 48","ethylene response factor 48, APETALA2/ethylene-responsive element binding protein 170, Drought Responsive AP2/EREBP gene 1",8," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0048364 - root development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0045454 - cell redox homeostasis","TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000115 - root mass density, TO:0006001 - salt tolerance, TO:0006002 - proline content, TO:0002673 - amino acid content, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000456 - spikelet number, TO:0000152 - panicle number","PO:0007520 - root development stage ","Os08g0408500","LOC_Os08g31580.1"]
[{"$nulls":23},"Os01g0875500","Os05g0134400","Os02g0817900","Os02g0817900",1.1431576,2.516514,null,"Os02g0193732",4.1913824,"Os01g0864566",-1.4587059,{"$nulls":29},"BIC1","OsBIC1","BLUE-LIGHT INHIBITOR OF CRYPTOCHROME 1","Blue-light Inhibitor of Cryptochrome 1",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009637 - response to blue light, GO:0009785 - blue light signaling pathway, GO:0009740 - gibberellic acid mediated signaling, GO:0051510 - regulation of unidimensional cell growth","TO:0002675 - gibberellic acid content, TO:0002689 - leaf sheath length, TO:0000159 - blue light sensitivity",null,"Os04g0412100","LOC_Os04g33610.1",{"$nulls":7},"CP1","OsCP1, Os CP1","CYSTEINE PROTEASE 1","cysteine protease1, Cysteine protease 1, Cys protease 1",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010446 - response to alkalinity, GO:0006508 - proteolysis, GO:0048653 - anther development, GO:0004197 - cysteine-type endopeptidase activity, GO:0009908 - flower development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030154 - cell differentiation","TO:0000481 - alkali sensitivity","PO:0001004 - anther development stage ","Os04g0670500","LOC_Os04g57490.1",{"$nulls":6},"SDR2","Sdr2*, Sdr2","SEED DORMANCY 2","Seed dormancy-2",5," Seed - Physiological traits - Dormancy","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",{"$nulls":8},"AGO2","OsAGO2","ARGONAUTE 2","sativa Argonaute 2, Protein argonaute 2, ARGONAUTE2",4," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009690 - cytokinin metabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0046466 - membrane lipid catabolic process, GO:0031047 - gene silencing by RNA, GO:0050687 - negative regulation of defense response to virus, GO:0006306 - DNA methylation, GO:0003676 - nucleic acid binding","TO:0000734 - grain length, TO:0002660 - cytokinin content, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000020 - black streak dwarf virus resistance, TO:0006001 - salt tolerance",null,"Os04g0615700","LOC_Os04g52540.1","Os02g0729400","Os12g0191500","Os02g0700700",6.0517774,0,null,"ERF62","OsERF#062, OsERF062, OsERF62, AP2/EREBP#125, AP2/EREBP125, AP2-125, OsLG3, LG3, OsLG3/OsAP2-125, OsAP2-125, WAP1, OsWAP1, OsSTAP1, STAP1, ERF1, OsERF1","ETHYLENE RESPONSE FACTOR 62","ethylene response factor 62, APETALA2/ethylene-responsive element binding protein 125, Wall-Associated regulator WAP1",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0055075 - potassium ion homeostasis, GO:0051238 - sequestering of metal ion, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0008284 - positive regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009736 - cytokinin mediated signaling, GO:0009873 - ethylene mediated signaling pathway, GO:0005634 - nucleus, GO:0006970 - response to osmotic stress, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0045454 - cell redox homeostasis, GO:0009723 - response to ethylene stimulus, GO:0009739 - response to gibberellin stimulus, GO:0055078 - sodium ion homeostasis, GO:0009409 - response to cold","TO:0000276 - drought tolerance, TO:0000167 - cytokinin sensitivity, TO:0000609 - potassium content, TO:0000608 - sodium content, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000166 - gibberellic acid sensitivity","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009047 - stem ","Os03g0183000","LOC_Os03g08470.2, LOC_Os03g08470.1, LOC_Os03g08470.3"]
[{"$nulls":23},"Os01g0905800","Os12g0548300","Os12g0605800","Os12g0605800",1.1076013,1.2200819,null,"Os08g0471800",4.177091,"Os02g0612200",-1.4583602,{"$nulls":29},"BIC2","OsBIC2","BLUE-LIGHT INHIBITOR OF CRYPTOCHROME 2","Blue-light Inhibitor of Cryptochrome 2",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009785 - blue light signaling pathway, GO:0009637 - response to blue light","TO:0000159 - blue light sensitivity, TO:0002689 - leaf sheath length",null,"Os02g0532800","LOC_Os02g32990.1",{"$nulls":7},"CUC3","OsCUC3, ONAC107, NAC107, DLN214, OsDLN214","CUP-SHAPED COTYLEDON 3","cup-shaped cotyledon 3, NAC domain-containing protein 107, CUP-SHAPED COTYLEDON3, DLN repressor 214, DLN motif protein 214",8," Vegetative organ - Leaf,  Seed - Morphological traits - Embryo,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045449 - regulation of transcription, GO:0009790 - embryonic development, GO:0048508 - embryonic meristem development, GO:0003677 - DNA binding, GO:0048366 - leaf development, GO:0009791 - post-embryonic development, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0010492 - maintenance of shoot apical meristem identity","TO:0006020 - shoot apical meristem development, TO:0000225 - stamen number, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0020103 - flag leaf , PO:0009055 - bract , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0009005 - root , PO:0025034 - leaf , PO:0020148 - shoot apical meristem , PO:0009009 - plant embryo ","Os08g0511200","LOC_Os08g40030.1",{"$nulls":6},"SH","Sh(t)*, Sh6","SHATTERING","Shattering, Seed shattering, Shattering-6",4," Seed - Physiological traits - Shattering",null,"TO:0000473 - grain shattering","PO:0009010 - seed ",{"$nulls":8},"AGO3","OsAGO3","ARGONAUTE 3","Protein argonaute 3",4," Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0031047 - gene silencing by RNA, GO:0003676 - nucleic acid binding","TO:0006001 - salt tolerance",null,"Os04g0615800","LOC_Os04g52550.1","Os02g0656500","Os01g0659900","Os10g0478000",5.991072,0,null,"ERF83","OsERF#083, OsERF083, OsERF83, AP2/EREBP#163, AP2/EREBP163","ETHYLENE RESPONSE FACTOR 83","ethylene response factor 83, APETALA2/ethylene-responsive element binding protein 163",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009607 - response to biotic stimulus","TO:0000040 - panicle length, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000179 - biotic stress trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000447 - filled grain number","PO:0009047 - stem , PO:0025034 - leaf , PO:0009005 - root , PO:0009015 - portion of vascular tissue ","Os03g0860100","LOC_Os03g64260.1"]
[{"$nulls":23},"Os01g0911200","Os02g0744900","Os07g0580900","Os07g0580900",1.0678959,1.3168926,null,"Os06g0531900",4.174036,"Os06g0168500",-1.4581944,{"$nulls":29},"G2-NB-LRR","OsG2-NB-LRR, CVS-G2, OsCVS-G2","_","G2 nucleotide-binding and leucine-rich repeat protein, Close vein spacing G2",9," Vegetative organ - Leaf","GO:0048366 - leaf development",{"$nulls":3},"LOC_Os09g14010.1",{"$nulls":7},"FOR1","OsFOR1, Osfor1, OsPGIP5, PGIP5","FLORAL ORGAN REGULATOR 1","rice floral organ regulator-1, Floral organ regulator 1, Polygalacturonase-inhibiting protein 5",7," Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048833 - specification of floral organ number, GO:0004857 - enzyme inhibitor activity, GO:0042742 - defense response to bacterium, GO:0032940 - secretion by cell, GO:0030154 - cell differentiation, GO:0005515 - protein binding, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000208 - lemma number, TO:0000223 - pistil anatomy and morphology trait, TO:0000209 - palea number, TO:0000203 - bacterial leaf streak disease resistance, TO:0000657 - spikelet anatomy and morphology trait, TO:0000225 - stamen number","PO:0004706 - flower primordium , PO:0005052 - plant callus , PO:0009082 - spikelet floret ","Os07g0568700","LOC_Os07g38130.1",{"$nulls":6},"SL","OsSL, sl (spl1), sl*, sl, spl1, CYP71P1, Os CYP71P1, T5H, OsT5H, CYP71A1, OsCYP71A1, OsLLM1, LLM1, LLM1/OsSL, ELL1, OsELL1, ELL1/SL, OsT5H1","SEKIGUCHI LESION","Sekiguchi lesion, Cytochrome P450 71P1, tryptamine 5-hydroxylase, large lesion mimic 1, early lesion leaf 1",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005783 - endoplasmic reticulum, GO:0009646 - response to absence of light, GO:0009414 - response to water deprivation, GO:0009658 - chloroplast organization, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0070265 - necrotic cell death, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0052545 - callose localization, GO:0009266 - response to temperature stimulus, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009408 - response to heat, GO:0012501 - programmed cell death, GO:0006913 - nucleocytoplasmic transport, GO:0009651 - response to salt stress, GO:0002213 - defense response to insect, GO:0042427 - serotonin biosynthetic process, GO:0009416 - response to light stimulus","TO:0000482 - chemical stress sensitivity, TO:0000454 - stem borer resistance, TO:0000495 - chlorophyll content, TO:0000455 - seed set percent, TO:0002757 - flag leaf length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000293 - chlorophyll-a content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000261 - insect damage resistance, TO:0000401 - plant growth hormone sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000075 - light sensitivity, TO:0000259 - heat tolerance, TO:0000063 - mimic response, TO:0002715 - chloroplast development trait, TO:0000295 - chlorophyll-b content, TO:0000276 - drought tolerance, TO:0000432 - temperature response trait, TO:0000468 - leaf blast disease resistance, TO:0000496 - carotenoid content, TO:0000424 - brown planthopper resistance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0009005 - root , PO:0007010 - whole plant fruit ripening stage , PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009025 - vascular leaf ","Os12g0268000","LOC_Os12g16720.1",{"$nulls":6},"ALDH7","OsALDH7, osaldh7, LDH, ALDH7B7, OsALDH7B6, ALDH7B6, OsAnt1, Ant1","ALDEHYDE DEHYDROGENASE 7","Oryza sativa Aldehyde Dehydrogenase 7, Family 7 ALDH, lactic acid dehydrogenase, Aldehyde Dehydrogenase 7B6, antiquitin 1",9," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009629 - response to gravity, GO:0009751 - response to salicylic acid stimulus, GO:0009611 - response to wounding, GO:0009408 - response to heat, GO:0009635 - response to herbicide, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, GO:0009753 - response to jasmonic acid stimulus, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus","TO:0000432 - temperature response trait, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000058 - herbicide sensitivity, TO:0002693 - gravity response trait, TO:0000074 - blast disease","PO:0006036 - root epidermis ","Os09g0440300","LOC_Os09g26880.4, LOC_Os09g26880.3, LOC_Os09g26880.1","Os03g0648400","Os02g0730000","Os07g0674800",5.973049,0,null,"ERF95","OsERF#095, OsERF095, OsERF95, AP2/EREBP#020, AP2/EREBP20, OsSta2, Sta2","ETHYLENE RESPONSE FACTOR 95","ethylene response factor 95, APETALA2/ethylene-responsive element binding protein 20, Salt tolerance activation 2",2," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity","TO:0000352 - plant dry weight, TO:0000442 - plant fresh weight, TO:0000495 - chlorophyll content, TO:0001033 - relative spikelet number, TO:0000590 - grain weight, TO:0002661 - seed maturation, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance",null,"Os02g0655200","LOC_Os02g43820.1"]
[{"$nulls":23},"Os01g0930800","Os05g0191700","Os04g0118100","Os04g0118100",1.0574635,1.3241987,null,"Os11g0286800",4.1703835,"Os10g0445900",-1.455221,{"$nulls":29},"G7-NB-LRR","OsG7-NB-LRR, CVS-G7, OsCVS-G7","_","G7 nucleotide-binding and leucine-rich repeat protein, Close vein spacing G7",9," Vegetative organ - Leaf","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0048366 - leaf development",null,null,"Os09g0311600","LOC_Os09g14100.1",{"$nulls":7},"HSP16.9B","Oshsp16.9B, OsHsp16.9B, HSP16.9B, OsHsp17.0, OsHSP16.9B-CI, OsHSP17.0, OsSHSP2, OsSTA3","16.9 KDA CLASS I HEAT SHOCK PROTEIN 2","16.9 kDa class I heat shock protein 2, 16.9 kDa heat shock protein 2",1," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005737 - cytoplasm, GO:0042542 - response to hydrogen peroxide, GO:0010286 - heat acclimation, GO:0009644 - response to high light intensity, GO:0009408 - response to heat","TO:0000259 - heat tolerance","PO:0009066 - anther ","Os01g0136200","LOC_Os01g04380.1",{"$nulls":6},"VP1","Vp1* (OSVP1), OsVP1, OsVp1, Vp1, ABI3, OsABI3, OsLFL4, OsVp-1, OSVP1","VIVIPAROUS 1","Viviparous-1, Protein viviparous homolog, B3 domain-containing protein VP1, Transcription activator VP1-rice, LEAFY COTYLEDON 2 and FUSCA 3-LIKE 4",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0005634 - nucleus, GO:0009733 - response to auxin stimulus, GO:0009845 - seed germination, GO:0017163 - basal transcription repressor activity, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009414 - response to water deprivation, GO:0034059 - response to anoxia, GO:0009737 - response to abscisic acid stimulus, GO:0009790 - embryonic development, GO:0009738 - abscisic acid mediated signaling, GO:0003677 - DNA binding","TO:0000619 - vivipary, TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0000253 - seed dormancy, TO:0000615 - abscisic acid sensitivity","PO:0007057 - 0 seed germination stage , PO:0009010 - seed ","Os01g0911700","LOC_Os01g68370.4, LOC_Os01g68370.3, LOC_Os01g68370.2, LOC_Os01g68370.1",{"$nulls":6},"ANS","ANS, OsANS1, ANS1, LDOX, LDOX1, OsLDOX, OsLDOX1","ANTHOCYANIDIN SYNTHASE","anthocyanidin synthase, leucoanthocyanidin dioxygenase",1," Biochemical character,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0009718 - anthocyanin biosynthetic process, GO:0050589 - leucocyanidin oxygenase activity, GO:0009611 - response to wounding, GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0009813 - flavonoid biosynthetic process, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0010023 - proanthocyanidin biosynthetic process, GO:0009416 - response to light stimulus, GO:0007033 - vacuole organization, GO:0005506 - iron ion binding, GO:0048316 - seed development, GO:0009408 - response to heat","TO:0000259 - heat tolerance, TO:0000168 - abiotic stress trait, TO:0000290 - flavonoid content, TO:0000707 - pericarp color, TO:0000075 - light sensitivity, TO:0000653 - seed development trait, TO:0000071 - anthocyanin content","PO:0001170 - seed development stage ","Os01g0372500","LOC_Os01g27490.1","Os01g0239100","Os03g0305400","Os03g0113000",5.7496285,0,null,"NGR5","ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, RLA1, RLA1/SMOS1, OsERF142/SMOS1, OsNGR5","NITROGEN-MEDIATED TILLER GROWTH RESPONSE 5","ethylene response factor 142, APETALA2/ethylene-responsive element binding protein 49, small organ size1, small organ size 1, SHOEBOX, shoebox, reduced leaf angle1, reduced leaf angle 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0016049 - cell growth, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009845 - seed germination, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006808 - regulation of nitrogen utilization","TO:0000163 - auxin sensitivity, TO:0002684 - plant cell size, TO:0001035 - stem width, TO:0002602 - pistil size, TO:0002601 - stamen size, TO:0000391 - seed size, TO:0000227 - root length, TO:0002637 - leaf size, TO:0000371 - yield trait, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0002677 - brassinosteroid sensitivity","PO:0007527 - 2 root meristem formation stage , PO:0006085 - root meristem , PO:0007057 - 0 seed germination stage ","Os05g0389000","LOC_Os05g32270.2, LOC_Os05g32270.1"]
[{"$nulls":23},"Os01g0944900","Os10g0378100","Os03g0829000","Os03g0829000",1.0151182,-0.9626622,null,"Os01g0750500",4.1667438,"Os04g0556500",-1.454739,{"$nulls":29},"XOAT3","OsTBL9, TBL9, OsXOAT3","XYLAN O-ACETYLTRANSFERASE 3","trichome birefringence-like 9, xylan O-acetyltransferase 3",12," Biochemical character,  Vegetative organ - Leaf","GO:0016413 - O-acetyltransferase activity, GO:0005794 - Golgi apparatus","TO:0002681 - leaf curling",null,"Os12g0104700","LOC_Os12g01380.1",{"$nulls":7},"DSG1","OsMAPK6, MAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, OsDSG1","DWARF AND SMALL GRAIN 1","Mitogen-activated protein kinase 1, MAP kinase 1, MAP kinase 6, dwarf and small grain1",6," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010200 - response to chitin, GO:0005524 - ATP binding, GO:0009524 - phragmoplast, GO:0009651 - response to salt stress, GO:0010120 - camalexin biosynthetic process, GO:0006952 - defense response, GO:0009790 - embryonic development, GO:0009741 - response to brassinosteroid stimulus, GO:0002238 - response to molecule of fungal origin, GO:0009414 - response to water deprivation, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009409 - response to cold, GO:0009814 - defense response, incompatible interaction, GO:0009734 - auxin mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0009574 - preprophase band, GO:0043068 - positive regulation of programmed cell death, GO:0010268 - brassinosteroid homeostasis, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0004707 - MAP kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0048481 - ovule development, GO:0009742 - brassinosteroid mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0000165 - MAPKKK cascade, GO:0005737 - cytoplasm, GO:0006468 - protein amino acid phosphorylation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:2000038 - regulation of stomatal complex development, GO:0005802 - trans-Golgi network, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus, GO:0080136 - priming of cellular response to stress, GO:0009738 - abscisic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0009733 - response to auxin stimulus, GO:0006979 - response to oxidative stress, GO:2000037 - regulation of stomatal complex patterning, GO:0042127 - regulation of cell proliferation, GO:0051301 - cell division","TO:0000447 - filled grain number, TO:0002668 - jasmonic acid content, TO:0002677 - brassinosteroid sensitivity, TO:0002676 - brassinosteroid content, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000454 - stem borer resistance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000203 - bacterial leaf streak disease resistance, TO:0006032 - panicle size, TO:0002669 - diterpenoid phytoalexin content, TO:0000273 - armyworm resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000175 - bacterial blight disease resistance, TO:0000439 - fungal disease resistance, TO:0002660 - cytokinin content, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0000074 - blast disease, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os06g0154500","LOC_Os06g06090.2, LOC_Os06g06090.1",{"$nulls":6},"RIV1","riv1","RICE VIVIPARY 1","rice vivipary 1, rice vivipary-1",null," Seed - Morphological traits - Embryo","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",{"$nulls":8},"BC10","BC10, bc10, FC116, FC116/BC10, Osbc10, Osfc116","BRITTLE CULM 10","brittle culm 10, fragile culm 116",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0008375 - acetylglucosaminyltransferase activity, GO:0016020 - membrane, GO:0031225 - anchored to membrane, GO:0005886 - plasma membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009808 - lignin metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0009809 - lignin biosynthetic process, GO:0045492 - xylan biosynthetic process, GO:0009531 - secondary cell wall","TO:0000307 - hexose content, TO:0006006 - monosaccharide content, TO:0000300 - glucose content, TO:0000051 - stem strength, TO:0000731 - lignin content",null,"Os05g0170000","LOC_Os05g07790.1","Os01g0294700","Os03g0118800","Os05g0111300",5.6575284,0,null,"MPK16","OsMPK16, OsMPK15, MPK15, OsMAPK16, MAPK16","MAP KINASE 16","MAP kinase 16",11," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0042742 - defense response to bacterium, GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031348 - negative regulation of defense response, GO:0009863 - salicylic acid mediated signaling pathway, GO:0005773 - vacuole, GO:0005886 - plasma membrane, GO:0000165 - MAPKKK cascade, GO:0050832 - defense response to fungus","TO:0000734 - grain length, TO:0000605 - hydrogen peroxide content, TO:0000172 - jasmonic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000396 - grain yield, TO:0000074 - blast disease, TO:0000391 - seed size, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility",null,"Os11g0271100","LOC_Os11g17080.3, LOC_Os11g17080.2, LOC_Os11g17080.1"]
[{"$nulls":23},"Os01g0946600","Os03g0581400","Os05g0573300","Os05g0573300",0.96828526,-1.0099672,null,"Os03g0100800",4.164438,"Os07g0180700",-1.4535028,{"$nulls":29},"RL14","2-ODD24, Os2-ODD24, 2ODD24, Os2ODD24","ROLLING LEAF 14","Rolling-leaf14, Rolling-leaf 14, Rolling leaf 14, 2-oxoglutarate-dependent dioxygenase 24",10," Biochemical character,  Vegetative organ - Leaf","GO:0051213 - dioxygenase activity, GO:0006833 - water transport, GO:0009834 - secondary cell wall biogenesis, GO:0046872 - metal ion binding","TO:0002641 - acid detergent fiber, TO:0000085 - leaf rolling, TO:0001018 - transpiration rate","PO:0004006 - mesophyll cell , PO:0005427 - sclerenchyma ","Os10g0558900","LOC_Os10g40960.1",{"$nulls":7},"NAM","OsNAM, OMTN5, ONAC092, ONAC92, NAC92, CUC2, OsNAM/CUC2, DLN165, OsDLN165, OsCUC1, CUC1, OsNAM/ OMTN5, OsNAM1, NAM1","NO APICAL MERISTEM","no apical meristem, Petunia NO APICAL MERISTEM ortholog, miR164-targeted NAC5, Oryza miR164-targeted NAC5, NAC domain-containing protein 092, NAC domain-containing protein 92, DLN repressor 165, DLN motif protein 165, CUP-SHAPED COTYLEDON 1",6," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048497 - maintenance of floral organ identity, GO:0048508 - embryonic meristem development, GO:0010492 - maintenance of shoot apical meristem identity, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0048437 - floral organ development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0009791 - post-embryonic development, GO:0010093 - specification of floral organ identity, GO:0045449 - regulation of transcription, GO:0048507 - meristem development, GO:0009790 - embryonic development, GO:0003677 - DNA binding, GO:0010450 - inflorescence meristem growth, GO:0005634 - nucleus","TO:0000655 - leaf development trait, TO:0000050 - inflorescence branching, TO:0020034 - glume width, TO:0000215 - stamen anatomy and morphology trait, TO:0006022 - floral organ development trait, TO:0000437 - male sterility, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000670 - floret number, TO:0000040 - panicle length, TO:0006019 - floral organ identity, TO:0000547 - primary branch number, TO:0000225 - stamen number, TO:0006038 - floral organ number, TO:0000557 - secondary branch number, TO:0006020 - shoot apical meristem development, TO:0000274 - floret anatomy and morphology trait, TO:0000145 - internode length, TO:0000621 - inflorescence development trait, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0006016 - meristem tissue development trait, TO:0006010 - lodicule number, TO:0002689 - leaf sheath length, TO:0006032 - panicle size","PO:0005020 - vascular bundle , PO:0009005 - root , PO:0020148 - shoot apical meristem , PO:0025034 - leaf , PO:0009055 - bract , PO:0020103 - flag leaf , PO:0009029 - stamen , PO:0025082 - reproductive shoot system , PO:0009030 - carpel , PO:0009038 - palea , PO:0009037 - lemma , PO:0025585 - floral organ formation stage , PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0020033 - coleoptile , PO:0025142 - leaf tip ","Os06g0344900","LOC_Os06g23650.1",{"$nulls":6},"RIV2","riv2","RICE VIVIPARY 2","rice vivipary 2, rice vivipary-2",null," Seed - Morphological traits - Embryo","GO:0009845 - seed germination","TO:0000253 - seed dormancy","PO:0009010 - seed ",{"$nulls":8},"BGAL1","OsBgal1, beta-gal, OsBGal1","BETA-GALACTOSIDASE 1","Beta-galactosidase 5, Lactase 5",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0048046 - apoplast, GO:0005529 - sugar binding, GO:0043169 - cation binding, GO:0004565 - beta-galactosidase activity, GO:0005975 - carbohydrate metabolic process",null,null,"Os03g0165400","LOC_Os03g06940.1, LOC_Os03g06940.2","Os11g0116000","Os01g0580500","Os11g0170900",5.4829445,0,null,"CBE1","OsWD40-6, OsCBE1","CULLIN4-BASED E3 UBIQUITIN LIGASE 1","Cullin4-Based E3 ubiquitin ligase1",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0010029 - regulation of seed germination, GO:0009737 - response to abscisic acid stimulus","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0001016 - relative chlorophyll content, TO:0000152 - panicle number, TO:0000615 - abscisic acid sensitivity, TO:0002759 - grain number, TO:0000316 - photosynthetic ability",null,"Os01g0185400","LOC_Os01g09020.1"]
[{"$nulls":23},"Os02g0143100","Os12g0271700","Os03g0421700","Os03g0421700",-1.0237889,-0.9626622,null,"Os03g0582000",4.1622157,"Os07g0566200",-1.4502363,{"$nulls":29},"LO9-177","OsLO9-177","_","small KxDL motif-containing protein LO9-177",3," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0002687 - cell elongation trait",null,"Os03g0640400","LOC_Os03g43910.1",{"$nulls":7},"RA8","OsBURP15, BURP15","ANTHER-SPECIFIC PROTEIN 8","BURP domain-containing protein 15, Anther-specific protein 8",9," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009555 - pollen development",null,null,"Os09g0480900","LOC_Os09g30320.1",{"$nulls":6},"SHO2","sho2","SHOOT ORGANIZATION 2","shoot organization 2, shoot organization-2, shoot organization2",null," Seed - Morphological traits - Embryo","GO:0007275 - multicellular organismal development, GO:0009887 - organ morphogenesis, GO:0009888 - tissue development","TO:0000492 - leaf shape, TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0009025 - vascular leaf ",{"$nulls":8},"CDT1","OsCDT1, OsCCX2, CCX2, OsNCX8, NCX8","CADMIUM TOLERANT 1","sativa DcCDT1 homologue 1, cation/Ca2+ exchanger 2, cadmium tolerance 1, Na+/Ca2+ Exchanger 8, Sodium/calcium exchanger 8",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0051592 - response to calcium ion, GO:0032025 - response to cobalt ion, GO:0005886 - plasma membrane, GO:0010038 - response to metal ion, GO:0010039 - response to iron ion, GO:0009411 - response to UV, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0010226 - response to lithium ion, GO:0010043 - response to zinc ion, GO:0009414 - response to water deprivation, GO:0015086 - cadmium ion transmembrane transporter activity, GO:0046686 - response to cadmium ion","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000351 - zinc sensitivity, TO:0000224 - iron sensitivity, TO:0000276 - drought tolerance, TO:0000160 - UV light sensitivity, TO:0000006 - calcium sensitivity","PO:0005352 - xylem , PO:0020141 - stem node , PO:0009015 - portion of vascular tissue ","Os03g0656500","LOC_Os03g45370.1","Os11g0116200","Os04g0225700","Os01g0913300",5.415975,0,null,"RGB1","OsWD40-80, RGbeta1, OsRGB1","RICE G PROTEIN BETA SUBUNIT 1","heterotrimeric G protein beta 1 subunit, heterotrimeric G protein b-subunit 1, G protein beta subunit 1",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0048573 - photoperiodism, flowering, GO:0008219 - cell death, GO:0009887 - organ morphogenesis, GO:0048316 - seed development, GO:0010252 - auxin homeostasis, GO:0010600 - regulation of auxin biosynthetic process, GO:0009723 - response to ethylene stimulus, GO:0048367 - shoot development, GO:0010431 - seed maturation, GO:0004871 - signal transducer activity, GO:0005783 - endoplasmic reticulum, GO:0009651 - response to salt stress, GO:0048527 - lateral root development, GO:0009409 - response to cold, GO:0010581 - regulation of starch biosynthetic process, GO:0009817 - defense response to fungus, incompatible interaction, GO:0005985 - sucrose metabolic process, GO:0048364 - root development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009790 - embryonic development, GO:0010154 - fruit development, GO:0009845 - seed germination, GO:0080008 - CUL4 RING ubiquitin ligase complex, GO:0030968 - endoplasmic reticulum unfolded protein response","TO:0000357 - growth and development trait, TO:0000656 - root development trait, TO:0000620 - embryo development trait, TO:0002672 - auxin content, TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000430 - germination rate, TO:0000639 - seed fertility, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000152 - panicle number, TO:0000137 - days to heading, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000064 - embryo related trait","PO:0007631 - plant embryo stage , PO:0007131 - seedling development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0007632 - seed maturation stage , PO:0025527 - shoot system development stage ","Os03g0669200","LOC_Os03g46650.1"]
[{"$nulls":23},"Os02g0177900","Os09g0460300","Os09g0565700","Os09g0565700",-1.0607471,-1.3244491,null,"Os10g0463600",4.1522603,"Os03g0310600",-1.4500562,{"$nulls":29},"_","OsBUL3, BUL3, OsbHLH174, bHLH174","_","BRASSINOSTEROID UPREGULATED 1-LIKE3, BRASSINOSTEROID UPREGULATED 1-LIKE 3, basic helix-loop-helix protein 174",10," Vegetative organ - Leaf","GO:0009739 - response to gibberellin stimulus, GO:0009733 - response to auxin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0046983 - protein dimerization activity","TO:0002677 - brassinosteroid sensitivity, TO:0000163 - auxin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000206 - leaf angle",null,"Os10g0403800","LOC_Os10g26410.1",{"$nulls":7},"UDT1","Udt1, bHLH164, OsUDT1, OsbHLH164","UNDEVELOPED TAPETUM 1","Undeveloped tapetum-1, undeveloped Tapetum1, undeveloped Tapetum 1, undeveloped tapetum 1, UDT1 protein, basic helix-loop-helix protein 164",7," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0048653 - anther development, GO:0045449 - regulation of transcription, GO:0030528 - transcription regulator activity, GO:0048656 - tapetal layer formation, GO:0009555 - pollen development, GO:0048443 - stamen development, GO:0048658 - tapetal layer development","TO:0000245 - pollen free, TO:0000215 - stamen anatomy and morphology trait","PO:0009051 - spikelet , PO:0009071 - anther wall tapetum , PO:0000032 - tetrad of microspores , PO:0004700 - anther wall middle layer ","Os07g0549600","LOC_Os07g36460.1",{"$nulls":6},"SHO3","sho3","SHOOT ORGANIZATION 3","shoot organization 3, shoot organization-3",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0007275 - multicellular organismal development, GO:0009888 - tissue development","TO:0000064 - embryo related trait, TO:0000492 - leaf shape","PO:0009009 - plant embryo , PO:0009025 - vascular leaf ",{"$nulls":8},"CDT2","OsCDT2","CADMIUM TOLERANT 2","sativa DcCDT1 homologue 2, cadmium tolerance 2",6," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion",null,null,"Os06g0143100","LOC_Os06g05120.1, LOC_Os06g05120.2","Os12g0115300","Os03g0564600","Os12g0197100",5.367574,0,null,"_","OsWD40-86, WD40-86, OsWDR5a, WDR5a, OsWDR5, WDR5","_","WD repeat domain 5",3," Reproductive organ - Heading date,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0051568 - histone H3-K4 methylation, GO:0005634 - nucleus, GO:0048188 - Set1C/COMPASS complex, GO:0010229 - inflorescence development, GO:0009790 - embryonic development, GO:0042393 - histone binding, GO:0010228 - vegetative to reproductive phase transition","TO:0006032 - panicle size, TO:0000137 - days to heading, TO:0002759 - grain number, TO:0000557 - secondary branch number, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0725400","LOC_Os03g51550.1, LOC_Os03g51550.2, LOC_Os03g51550.3"]
[{"$nulls":23},"Os02g0562700","Os07g0424400","Os03g0826600","Os03g0826600",-1.0878702,-0.96084374,null,"Os06g0546500",4.1498275,"Os01g0862600",-1.4497062,{"$nulls":29},"MS","MLS, OsMLS, OsMS","MALATE SYNTHASE ","malate synthase",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010150 - leaf senescence, GO:0005737 - cytoplasm, GO:0006108 - malate metabolic process, GO:0004474 - malate synthase activity, GO:0009514 - glyoxysome, GO:0006099 - tricarboxylic acid cycle, GO:0006097 - glyoxylate cycle, GO:0009617 - response to bacterium","TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os04g0486950","LOC_Os04g40990.2, LOC_Os04g40990.1",{"$nulls":7},"WAF1","OsWAF1, waf1, waf1-1, waf1-2, HEN1","WAVY LEAF 1","wavy leaf 1-1, wavy leaf 1-2, WAVY LEAF1, HUA ENHANCER 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development, GO:0008171 - O-methyltransferase activity, GO:0008173 - RNA methyltransferase activity, GO:0007275 - multicellular organismal development, GO:0010076 - maintenance of floral meristem identity",null,"PO:0007615 - flower development stage ","Os07g0164000","LOC_Os07g06970.1",{"$nulls":6},"FIB","fib, OsFIB, OsTAR2, TAR2, TSG1, OsTSG1, OsTAA1, TAA1","FISH BONE","fish bone, Trp aminotransferase 2, Tillering and small grain 1, tryptophan aminotransferase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0016846 - carbon-sulfur lyase activity, GO:0009408 - response to heat, GO:0060284 - regulation of cell development, GO:0048830 - adventitious root development, GO:0048364 - root development, GO:0009684 - indoleacetic acid biosynthetic process, GO:0048467 - gynoecium development, GO:0030170 - pyridoxal phosphate binding, GO:0009958 - positive gravitropism, GO:0009723 - response to ethylene stimulus, GO:0005783 - endoplasmic reticulum, GO:0080022 - primary root development, GO:0048449 - floral organ formation, GO:0009630 - gravitropism, GO:0010087 - phloem or xylem histogenesis, GO:0009926 - auxin polar transport, GO:0009414 - response to water deprivation, GO:0009851 - auxin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0048825 - cotyledon development, GO:0016021 - integral to membrane, GO:0051302 - regulation of cell division, GO:0046685 - response to arsenic, GO:0001558 - regulation of cell growth, GO:0010588 - cotyledon vascular tissue pattern formation, GO:0010078 - maintenance of root meristem identity","TO:0001006 - adventitious root number, TO:0000084 - root number, TO:0002637 - leaf size, TO:0000276 - drought tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000578 - root fresh weight, TO:0000031 - silicon sensitivity, TO:0006032 - panicle size, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000163 - auxin sensitivity, TO:0002681 - leaf curling, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000257 - root branching, TO:0000576 - stem length, TO:0002672 - auxin content, TO:0000397 - grain size, TO:0000492 - leaf shape, TO:0000259 - heat tolerance, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000206 - leaf angle, TO:0000436 - spikelet sterility","PO:0020103 - flag leaf , PO:0005001 - basal axillary shoot system , PO:0009005 - root , PO:0009047 - stem , PO:0009038 - palea , PO:0009037 - lemma , PO:0009025 - vascular leaf , PO:0009006 - shoot system , PO:0007520 - root development stage , PO:0025424 - vascular tissue development stage , PO:0009051 - spikelet ","Os01g0169800 ","LOC_Os01g07500.1",{"$nulls":6},"CDT3","OsCDT3","CADMIUM TOLERANT 3","sativa DcCDT1 homologue 3, cadmium tolerance 3",1," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0010044 - response to aluminum ion","TO:0000354 - aluminum sensitivity","PO:0009005 - root ","Os01g0178300","LOC_Os01g08300.1","Os12g0115500","Os05g0187100","Os03g0188400",5.307608,0,null,"DRW1","OsWD40-166, WD40-166, OsDRW1","DWARF-RELATED WD40 PROTEIN 1 ","dwarf-related wd40 protein 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0045740 - positive regulation of DNA replication, GO:0006974 - response to DNA damage stimulus, GO:0070734 - histone H3-K27 methylation, GO:0010564 - regulation of cell cycle process, GO:0005634 - nucleus, GO:0045787 - positive regulation of cell cycle","TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000145 - internode length","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0006085 - root meristem , PO:0020148 - shoot apical meristem ","Os09g0241100","LOC_Os09g06560.1"]
[{"$nulls":23},"Os02g0566800","Os03g0712800","Os03g0358100","Os03g0358100",-1.16496,-1.0668083,null,"Os01g0311300",4.148257,"Os01g0740300",-1.4475805,{"$nulls":29},"ASNASE2","OsASNase2, ASNase2","ASPARAGINASE 2","asparaginase2, asparaginase 2",4," Biochemical character,  Vegetative organ - Leaf,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016787 - hydrolase activity, GO:0004067 - asparaginase activity, GO:0048316 - seed development, GO:0006530 - asparagine catabolic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009051 - spikelet , PO:0005020 - vascular bundle , PO:0008007 - nucellar projection , PO:0009001 - fruit , PO:0004006 - mesophyll cell , PO:0000071 - companion cell , PO:0020103 - flag leaf , PO:0001054 - 4 leaf senescence stage , PO:0000074 - parenchyma cell ","Os04g0650700  ","LOC_Os04g55710.1",{"$nulls":7},"XTH27","OsXTH27, XTH","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 27","xyloglucan endotransglucosylase/hydrolase, xyloglucan endotransglucosylase 27",10," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005618 - cell wall, GO:0005975 - carbohydrate metabolic process, GO:0006073 - cellular glucan metabolic process, GO:0010087 - phloem or xylem histogenesis, GO:0010154 - fruit development, GO:0016762 - xyloglucan:xyloglucosyl transferase activity, GO:0048046 - apoplast, GO:0080086 - stamen filament development, GO:0009908 - flower development",null,"PO:0007615 - flower development stage ","Os10g0117000","LOC_Os10g02770.1",{"$nulls":6},"GEM","gem","GYPSY EMBRYO","gypsy embryo",null," Seed - Morphological traits - Embryo","GO:0048481 - ovule development, GO:0080060 - integument development, GO:0048316 - seed development","TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",{"$nulls":8},"CDT4","OsCDT4","CADMIUM TOLERANT 4","sativa DcCDT1 homologue 4, cadmium tolerance 4",2," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0010044 - response to aluminum ion","TO:0000354 - aluminum sensitivity",null,"Os02g0208500","LOC_Os02g11770.1","Os08g0558200","Os05g0571200","Os11g0702200",5.245071,0,null,"_","OsCOI1b, COI1b, OsCOI1H, COI1H, OsFbox260, Fbox260, Os_F0646","_","coronatine insensitive 1b, F-box protein 260",5," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010218 - response to far red light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009909 - regulation of flower development, GO:0010118 - stomatal movement, GO:0010150 - leaf senescence, GO:0009754 - detection of jasmonic acid stimulus, GO:0080027 - response to herbivore, GO:0009625 - response to insect, GO:0002213 - defense response to insect, GO:0009641 - shade avoidance, GO:0019005 - SCF ubiquitin ligase complex, GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0031348 - negative regulation of defense response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding","TO:0000396 - grain yield, TO:0000172 - jasmonic acid sensitivity, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000031 - silicon sensitivity, TO:0002712 - stay green trait, TO:0000424 - brown planthopper resistance, TO:0000261 - insect damage resistance, TO:0000298 - chlorophyll ratio, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility","PO:0001054 - 4 leaf senescence stage ","Os05g0449500","LOC_Os05g37690.1"]
[{"$nulls":23},"Os02g0601300","Os05g0204600","Os04g0498200","Os04g0498200",-1.1674123,-0.98272866,null,"Os10g0483500",4.1418147,"Os07g0105200",-1.4463052,{"$nulls":29},"_","RLS1, LRD43","_","lesion resembling disease 43, rapid leaf senescence 1",2," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0009735 - response to cytokinin stimulus, GO:0009658 - chloroplast organization, GO:0009646 - response to absence of light, GO:0009416 - response to light stimulus, GO:0043531 - ADP binding, GO:0043067 - regulation of programmed cell death, GO:0010150 - leaf senescence","TO:0000326 - leaf color, TO:0000167 - cytokinin sensitivity, TO:0000075 - light sensitivity, TO:0000495 - chlorophyll content, TO:0000063 - mimic response, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os02g0203500","LOC_Os02g10900.1",{"$nulls":7},"XTH8","OsXTH8, OsSTA207","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 8","Xyloglucan endotransglycosylase/hydrolase, xyloglucan endotransglucosylase 8",8," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016762 - xyloglucan:xyloglucosyl transferase activity, GO:0048046 - apoplast, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005618 - cell wall, GO:0006073 - cellular glucan metabolic process",null,"PO:0009066 - anther ","Os08g0237800","LOC_Os08g13980.1",{"$nulls":6},"LK3","lk3(t), lk3(t)*, SG3, GS3, SG3-GS3, OsGW3, OsGS3, RGG3/GS3/Mi/OsGGC1, RGG3, Mi, OsGGC1, GGC1, OsSYL3, SYL3","LONG KERNEL 3","long kernel 3, long kernel-3, grain size, grain length and weight protein, GRAIN SIZE 3, G gamma subunit GS3, Heterotrimeric G Protein gamma3 Subunit, style length 3",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0007275 - multicellular organismal development, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000592 - 1000-dehulled grain weight, TO:0000382 - 1000-seed weight, TO:0000402 - grain width, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002731 - grain length to width ratio, TO:0000137 - days to heading, TO:0000396 - grain yield, TO:0000146 - seed length, TO:0000391 - seed size, TO:0000162 - seed quality, TO:0002730 - grain shape, TO:0000040 - panicle length, TO:0000734 - grain length","PO:0009049 - inflorescence , PO:0009010 - seed ","Os03g0407400",{"$nulls":7},"CDT5","OsCDT5","CADMIUM TOLERANT 5","sativa DcCDT1 homologue 5, cadmium tolerance 5",5," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion",null,null,"Os05g0178300","LOC_Os05g08554.1","Os05g0566800","Os09g0433800","Os04g0600900",5.221672,0,null,"ILI1","ILI1, OsbHLH154, OsILI1","INCREASED LEAF INCLINATION 1","Increased Leaf Inclination1, INCREASED LEAF INCLINATION 1, basic helix-loop-helix protein 154",4," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0005773 - vacuole, GO:0009640 - photomorphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0010086 - embryonic root morphogenesis, GO:0009826 - unidimensional cell growth","TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000397 - grain size, TO:0000206 - leaf angle",null,"Os04g0641700","LOC_Os04g54900.1"]
[{"$nulls":23},"Os02g0605900","Os07g0408500","Os02g0465400","Os02g0465400",-1.22394,-1.0864153,null,"Os04g0165900",4.140965,"Os03g0675700",-1.4454222,{"$nulls":29},"SPL29","UAP1, OsUAP1","SPOTTED LEAF 29","spotted leaf 29, UDP-N-acetylglucosamine pyrophosphorylase 1",8," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic","GO:0042742 - defense response to bacterium, GO:0009694 - jasmonic acid metabolic process, GO:0009687 - abscisic acid metabolic process, GO:0005737 - cytoplasm, GO:0006952 - defense response, GO:0012501 - programmed cell death, GO:0042743 - hydrogen peroxide metabolic process, GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity, GO:0006048 - UDP-N-acetylglucosamine biosynthetic process, GO:0031347 - regulation of defense response, GO:0005829 - cytosol, GO:0010150 - leaf senescence","TO:0002667 - abscisic acid content, TO:0002668 - jasmonic acid content, TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000495 - chlorophyll content, TO:0000063 - mimic response, TO:0000069 - variegated leaf","PO:0001050 - leaf development stage , PO:0001054 - 4 leaf senescence stage ","Os08g0206900","LOC_Os08g10600.3, LOC_Os08g10600.1, LOC_Os08g10600.2",{"$nulls":7},"CDPK11","OsCDPK11, OsCPK11","CALCIUM-DEPENDENT PROTEIN KINASE 11",null,3," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding",null,"PO:0009049 - inflorescence , PO:0009029 - stamen ","Os03g0789000","LOC_Os03g57510.1",{"$nulls":6},"ARE1","are1","ABERRANT REGIONALIZATION OF EMBRYO","aberrant regionalization of embryo, aberrant regionalization of embryo-1",9," Seed - Morphological traits - Embryo",null,"TO:0000064 - embryo related trait","PO:0009009 - plant embryo ",{"$nulls":8},"DCL2A","OsDCL2a, OsDCL2","DICER-LIKE 2A","Endoribonuclease Dicer homolog 2a, Dicer-like protein 2a",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0003725 - double-stranded RNA binding, GO:0031047 - gene silencing by RNA, GO:0050832 - defense response to fungus, GO:0008026 - ATP-dependent helicase activity, GO:0030145 - manganese ion binding, GO:0006396 - RNA processing, GO:0000287 - magnesium ion binding, GO:0005634 - nucleus, GO:0005524 - ATP binding, GO:0004525 - ribonuclease III activity","TO:0000074 - blast disease",null,"Os03g0583900","LOC_Os03g38740.1","Os08g0102900","Os06g0126500","Os07g0689600",5.196869,0,null,"ILI5","ILI5, OsILI5, PGL2, OsPGL2, Os170, OsBUL1, BUL1, ILI5/PGL2, OsbHLH170, bHLH170","INCREASED LEAF INCLINATION 5","Increased Leaf Inclination 5, POSITIVE REGULATOR OF GRAIN LENGTH 2, BRASSINOSTEROID UPREGULATED 1-LIKE1, BRASSINOSTEROID UPREGULATED1 LIKE1, basic helix-loop-helix protein 170",2," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0051510 - regulation of unidimensional cell growth, GO:0009409 - response to cold","TO:0000734 - grain length, TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002688 - leaf lamina joint bending, TO:0000303 - cold tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0002687 - cell elongation trait, TO:0000590 - grain weight","PO:0009046 - flower , PO:0009051 - spikelet ","Os02g0747900","LOC_Os02g51320.1"]
[{"$nulls":23},"Os02g0698000","Os01g0743400","Os08g0503800","Os08g0503800",-1.2457505,-0.97760075,null,"Os12g0135500",4.136335,"Os11g0274100",-1.4452399,{"$nulls":29},"UAP2","OsUAP2","UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE 2","UDP-N-acetylglucosamine pyrophosphorylase 2",4," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic","GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0006048 - UDP-N-acetylglucosamine biosynthetic process, GO:0010150 - leaf senescence","TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence, TO:0000063 - mimic response","PO:0001050 - leaf development stage , PO:0001054 - 4 leaf senescence stage ","Os04g0613700","LOC_Os04g52370.1, LOC_Os04g52370.2",{"$nulls":7},"PIN1B","PIN1A, OsPIN1A, OsPIN1a, REH1, OsPIN1, OsPIN1b, REH1/OsPIN1","PIN PROTEIN 1B","PIN PROTEIN 1A, the rice homolog of A. thaliana EIR1, PIN-FORMED 1b, PIN-formed 1, rice ethylene insensitive root 1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045177 - apical part of cell, GO:0005215 - transporter activity, GO:0010229 - inflorescence development, GO:0048830 - adventitious root development, GO:0009630 - gravitropism, GO:0016021 - integral to membrane, GO:0010358 - leaf shaping, GO:0009638 - phototropism, GO:0009505 - plant-type cell wall, GO:0009733 - response to auxin stimulus, GO:0006810 - transport, GO:0009725 - response to hormone stimulus, GO:0048449 - floral organ formation, GO:0010051 - xylem and phloem pattern formation, GO:0051607 - defense response to virus, GO:0010338 - leaf formation, GO:0009908 - flower development, GO:0016020 - membrane, GO:0009506 - plasmodesma, GO:0009735 - response to cytokinin stimulus, GO:0009926 - auxin polar transport, GO:0048826 - cotyledon morphogenesis, GO:0009734 - auxin mediated signaling pathway, GO:0005737 - cytoplasm, GO:0009925 - basal plasma membrane, GO:0055085 - transmembrane transport, GO:0048364 - root development, GO:0009921 - auxin efflux carrier complex","TO:0000329 - tillering ability, TO:0002639 - shoot branching, TO:0000656 - root development trait, TO:0002672 - auxin content, TO:0000017 - anatomy and morphology related trait, TO:0002652 - root phototropism, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000011 - nitrogen sensitivity, TO:0000257 - root branching, TO:0006022 - floral organ development trait, TO:0000167 - cytokinin sensitivity","PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007600 - floral organ differentiation stage , PO:0000019 - gynoecium primordium , PO:0009066 - anther , PO:0025488 - flower bract primordium , PO:0009037 - lemma , PO:0008013 - anther vascular system ","Os02g0743400","LOC_Os02g50960.2, LOC_Os02g50960.1",{"$nulls":6},"NK2","nk2(t), nk2","NOTCHED KERNEL 2","notched kernel-2(t), notched kernel 2",5," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development",{"$nulls":10},"DCL2B","OsDCL2b","DICER-LIKE 2B","Endoribonuclease Dicer homolog 2b, Dicer-like protein 2b",9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0031047 - gene silencing by RNA, GO:0008026 - ATP-dependent helicase activity, GO:0003725 - double-stranded RNA binding, GO:0000287 - magnesium ion binding, GO:0030145 - manganese ion binding, GO:0006396 - RNA processing, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0005524 - ATP binding, GO:0004525 - ribonuclease III activity","TO:0000074 - blast disease",null,"Os09g0315100","LOC_Os09g14610.1, LOC_Os09g14610.2, LOC_Os09g14610.3","Os01g0916400","Os11g0701100","Os02g0630300",5.081969,0,null,"ILI6","ILI6, OsILI6, PGL1, OsPGL1","INCREASED LEAF INCLINATION 6","Increased Leaf Inclination6, POSITIVE REGULATOR OF GRAIN LENGTH 1",3," Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005773 - vacuole, GO:0009640 - photomorphogenesis, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0010086 - embryonic root morphogenesis, GO:0009826 - unidimensional cell growth, GO:0009742 - brassinosteroid mediated signaling","TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length",null,"Os03g0171300","LOC_Os03g07510.1, LOC_Os03g07510.2"]
[{"$nulls":23},"Os02g0781000","Os05g0496200","Os04g0550500","Os04g0550500",-1.4090298,1.1363305,null,"Os05g0140100",4.1362944,"Os02g0132500",-1.4448551,{"$nulls":29},"SPL31",null,"SPOTTED LEAF 31","spotted leaf 31",12," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0012501 - programmed cell death","TO:0000180 - spikelet fertility, TO:0000382 - 1000-seed weight, TO:0000063 - mimic response, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"PIN1C","PIN1B, OsPIN1B, OsPIN1b, OsPIN1c","PIN PROTEIN 1C","PIN PROTEIN 1B",11," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0055085 - transmembrane transport, GO:0009733 - response to auxin stimulus, GO:0009926 - auxin polar transport, GO:0048449 - floral organ formation, GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane","TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0006022 - floral organ development trait","PO:0000019 - gynoecium primordium , PO:0007600 - floral organ differentiation stage , PO:0009037 - lemma , PO:0025488 - flower bract primordium , PO:0008013 - anther vascular system , PO:0009066 - anther ","Os11g0137000 ","LOC_Os11g04190.1",{"$nulls":6},"NK","Nk","NOTCHED KERNEL","Notched kernel",5," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000287 - brown rice shape","PO:0009010 - seed ",{"$nulls":8},"DCL3A","OsDCL3a","DICER-LIKE 3A","Endoribonuclease Dicer homolog 3a, Dicer-like protein 3a",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0000287 - magnesium ion binding, GO:0031047 - gene silencing by RNA, GO:0003723 - RNA binding, GO:0006396 - RNA processing, GO:0050832 - defense response to fungus, GO:0003677 - DNA binding, GO:0004525 - ribonuclease III activity, GO:0004386 - helicase activity, GO:0030145 - manganese ion binding","TO:0000557 - secondary branch number, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000124 - flag leaf angle",null,"Os01g0909200","LOC_Os01g68120.1","Os05g0408900","Os03g0293500","Os04g0249600",4.935286,0,null,"IBH1","Os IBH1, OsIBH1, OsbHLH175, bHLH175","ILI1-BINDING BHLH PROTEIN 1","ILI1Binding bHLH Protein1, ILI1 Binding bHLH 1, basic helix-loop-helix protein 175",4," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009826 - unidimensional cell growth, GO:0006351 - transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0002687 - cell elongation trait, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os04g0660100","LOC_Os04g56500.1"]
[{"$nulls":23},"Os02g0831500","Os01g0368000","Os03g0599800","Os03g0599800",-1.4502249,-1.4671631,null,"Os05g0356700",4.121681,"Os01g0960400",-1.4444429,{"$nulls":29},"DG1",null,"DEFECTIVE GLUME 1 ","defective glume 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0001558 - regulation of cell growth, GO:0009908 - flower development","TO:0002677 - brassinosteroid sensitivity, TO:0000622 - flower development trait, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000206 - leaf angle, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0002601 - stamen size, TO:0000215 - stamen anatomy and morphology trait, TO:0006012 - carpel anatomy and morphology trait, TO:0000162 - seed quality, TO:0000402 - grain width","PO:0007615 - flower development stage , PO:0007600 - floral organ differentiation stage ",{"$nulls":9},"PIN1A","PIN1C, OsPIN1C, OsPIN1c, OsPIN1a","PIN PROTEIN 1A","PIN PROTEIN 1C",6," Biochemical character,  Vegetative organ - Root,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009733 - response to auxin stimulus, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0048449 - floral organ formation, GO:0046685 - response to arsenic, GO:0048830 - adventitious root development, GO:0009725 - response to hormone stimulus, GO:0009735 - response to cytokinin stimulus","TO:0006022 - floral organ development trait, TO:0000163 - auxin sensitivity, TO:0000031 - silicon sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000578 - root fresh weight, TO:0001006 - adventitious root number, TO:0000084 - root number","PO:0007600 - floral organ differentiation stage , PO:0000019 - gynoecium primordium , PO:0009066 - anther , PO:0008013 - anther vascular system , PO:0009037 - lemma , PO:0025488 - flower bract primordium ","Os06g0232300","LOC_Os06g12610.1",{"$nulls":6},"ISH3","iSh3, iSh3(t)","INHIBITOR FOR SH3-GLA","inhibitor for Sh3-gla",4," Seed - Physiological traits - Shattering",{"$nulls":11},"DMAS1","OsDMAS1","DEOXYMUGINEIC ACID SYNTHASE 1","sativa deoxymugineic acid synthase1, Deoxymugineic acid synthase1, Deoxymugineic acid synthase 1, deoxymugineic acid synthase1",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006826 - iron ion transport, GO:0010106 - cellular response to iron ion starvation, GO:0016491 - oxidoreductase activity","TO:0000224 - iron sensitivity","PO:0006036 - root epidermis , PO:0020124 - root stele , PO:0009005 - root , PO:0006203 - pericycle , PO:0000071 - companion cell , PO:0000258 - root cortex , PO:0005020 - vascular bundle , PO:0005417 - phloem , PO:0005421 - parenchyma , PO:0005772 - exodermis ","Os03g0237100","LOC_Os03g13390.2","Os05g0555100","Os11g0175700","Os03g0165400",4.8809204,0,null,"_","OsECS, ECS, GSH2, OsGSH2","_","gamma-glutamylcysteine synthetase",5," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0009409 - response to cold, GO:0052544 - callose deposition in cell wall during defense response, GO:0046688 - response to copper ion, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0009570 - chloroplast stroma, GO:0019761 - glucosinolate biosynthetic process, GO:0004357 - glutamate-cysteine ligase activity, GO:0005524 - ATP binding, GO:0009753 - response to jasmonic acid stimulus, GO:0009408 - response to heat, GO:0046686 - response to cadmium ion, GO:0009700 - indole phytoalexin biosynthetic process, GO:0006750 - glutathione biosynthetic process, GO:0009908 - flower development, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect","TO:0000303 - cold tolerance, TO:0000021 - copper sensitivity",null,"Os05g0129000","LOC_Os05g03820.3, LOC_Os05g03820.1, LOC_Os05g03820.2"]
[{"$nulls":23},"Os03g0124900","Os03g0250200","Os04g0636100","Os04g0636100",-1.5334667,-1.0413266,null,"Os08g0546700",4.116648,"Os03g0366000",-1.4425694,{"$nulls":29},"SPL33","LMM5.1, SPL33/LMM5.1","SPOTTED LEAF 33","spotted leaf 33, Lesion mimic mutant 5.1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic","GO:0008270 - zinc ion binding, GO:0009658 - chloroplast organization, GO:0003924 - GTPase activity, GO:0005525 - GTP binding, GO:0003746 - translation elongation factor activity, GO:0005622 - intracellular, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0042742 - defense response to bacterium, GO:0031348 - negative regulation of defense response, GO:0012501 - programmed cell death, GO:0010150 - leaf senescence, GO:0005783 - endoplasmic reticulum","TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0006007 - polysaccharide content, TO:0000175 - bacterial blight disease resistance, TO:0000063 - mimic response, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence , PO:0025034 - leaf ","Os01g0116600","LOC_Os01g02720.1, LOC_Os01g02720.2",{"$nulls":7},"PIN1D","OsPIN1D, OsPIN1d","PIN PROTEIN 1D",null,12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0009733 - response to auxin stimulus, GO:0048449 - floral organ formation, GO:0009735 - response to cytokinin stimulus","TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0006022 - floral organ development trait","PO:0000019 - gynoecium primordium , PO:0009066 - anther , PO:0007600 - floral organ differentiation stage , PO:0009037 - lemma , PO:0025488 - flower bract primordium , PO:0008013 - anther vascular system ","Os12g0133800","LOC_Os12g04000.1",{"$nulls":6},"SH5-GLUM","Sh5-glum","SHATTERING","Shattering 5-glu",5," Seed - Physiological traits - Shattering",{"$nulls":11},"F3'H","OsF3'H, OsCYP75B3, CYP75B3","FLAVONOID 3'-HYDROXYLASE","sativa flavonoid 3'-hydroxylase, Flavanone 3'-hydroxylase, P-450 75B3, Cytochrome P450 75B3, flavonoid 3'-monooxygenase",10," Biochemical character,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0048316 - seed development, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0045486 - naringenin 3-dioxygenase activity, GO:0005506 - iron ion binding, GO:0009813 - flavonoid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0016021 - integral to membrane","TO:0000071 - anthocyanin content, TO:0000259 - heat tolerance, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os10g0320100","LOC_Os10g17260.1","Os06g0220800","Os04g0530500","Os02g0208500",4.800588,0,null,"WOX4","OsWOX4, Os WOX4","WUSCHEL-LIKE HOMEOBOX 4","WUSCHEL-related homeobox 4, WUSCHEL-RELATED HOMEOBOX4",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0003700 - transcription factor activity, GO:0007275 - multicellular organismal development, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009959 - negative gravitropism, GO:0051510 - regulation of unidimensional cell growth, GO:0009635 - response to herbicide, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009555 - pollen development, GO:0008285 - negative regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009790 - embryonic development, GO:0010073 - meristem maintenance, GO:0043565 - sequence-specific DNA binding","TO:0000167 - cytokinin sensitivity, TO:0006017 - meristem identity, TO:0000276 - drought tolerance, TO:0000620 - embryo development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000391 - seed size, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000058 - herbicide sensitivity, TO:0002693 - gravity response trait","PO:0009010 - seed , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os04g0649400","LOC_Os04g55590.1"]
[{"$nulls":23},"Os03g0129300","Os03g0775000","Os10g0413500","Os10g0413500",-1.5848917,-1.124023,null,"Os09g0316000",4.116383,"Os08g0102900",-1.4411707,{"$nulls":29},"_","OsDW1-01g","_",null,1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits",null,"TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000206 - leaf angle, TO:0000207 - plant height",null,"Os01g0103800","LOC_Os01g01390.1, LOC_Os01g01390.2, LOC_Os01g01390.3, LOC_Os01g01390.4, LOC_Os01g01390.5",{"$nulls":7},"GW8","SPL16, OsSPL16, SLP1, OsSLP1, qGW8","GRAIN-WIDTH 8","RICE SQUAMOSA PROMOTER-BINDING-LIKE 16, Squamosa promoter-binding-like protein 16, SQUAMOSA promoter-binding-like 16, stunted lemma palea 1, grain-width 8",8," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0008284 - positive regulation of cell proliferation, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0002661 - seed maturation, TO:0000402 - grain width, TO:0000162 - seed quality, TO:0000397 - grain size",null,"Os08g0531600","LOC_Os08g41940.1",{"$nulls":6},"SH6-MER","Sh6-mer","SHATTERING","Shattering 6-mer",5," Seed - Physiological traits - Shattering",{"$nulls":11},"FDH","OsFDH, FDH 1, FDH1, OsFDH1","FORMATE DEHYDROGENASE","Formate dehydrogenase 1, mitochondrial, NAD-dependent formate dehydrogenase 1, Nad-dependent formate dehydrogenase",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0051287 - NAD or NADH binding, GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, GO:0010106 - cellular response to iron ion starvation, GO:0005739 - mitochondrion, GO:0008863 - formate dehydrogenase activity, GO:0034224 - cellular response to zinc ion starvation, GO:0019509 - methionine salvage","TO:0000351 - zinc sensitivity, TO:0000224 - iron sensitivity",null,"Os06g0486800","LOC_Os06g29180.1","Os02g0203000","Os03g0667100","Os02g0635800",4.7890244,0,null,"MIR530","miR530, Osa-miR530, OsmiR530, osa-MIR530, osa-miR530 osa-miR530-3p, osa-miR530-5p","MICRORNA530","MICRORNA530, osa-miRNA530, os-miRNA530",4," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000391 - seed size, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000455 - seed set percent, TO:0000470 - vascular tissue related trait, TO:0000546 - peduncle top diameter, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0020103 - flag leaf , PO:0005004 - shoot node , PO:0009009 - plant embryo , PO:0009010 - seed "]
[{"$nulls":23},"Os03g0132900","Os02g0594800","Os02g0782600","Os02g0782600",-1.5856768,-1.3563666,null,"Os06g0192100",4.112093,"Os01g0389700",-1.4404607,{"$nulls":29},"_","OsDW1-03g","_",null,3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits",null,"TO:0000484 - seed shape, TO:0000146 - seed length, TO:0000206 - leaf angle, TO:0000207 - plant height",null,"Os03g0270700","LOC_Os03g16400.1",{"$nulls":7},"LFL1","OsLFL1, OsSTA29, STA29","LATE-FLOWERING 1","B3 domain-containing protein LFL1, LEC2 and FUSCA3-like protein 1, LEAFY COTYLEDON 2 and FUSCA 3-LIKE 1, LEC2/FUS3-LIKE 1",1," Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0009908 - flower development, GO:0048573 - photoperiodism, flowering, GO:0010843 - promoter binding, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000622 - flower development trait","PO:0009066 - anther , PO:0007615 - flower development stage ","Os01g0713600","LOC_Os01g51610.1",{"$nulls":6},"qSH-1-1(t) (QSh1)","qSH-1-1(t) (QSh1)","Shattering (QTL)-1-1(t)","Shattering (QTL)-1-1(t)",1," Seed - Physiological traits - Shattering",{"$nulls":11},"FER1","OsFER1, OsFer1","FERRITIN 1","Ferritin 1, Ferritin",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006826 - iron ion transport, GO:0010043 - response to zinc ion, GO:0070288 - ferritin complex, GO:0009409 - response to cold, GO:0009570 - chloroplast stroma, GO:0009941 - chloroplast envelope, GO:0016491 - oxidoreductase activity, GO:0015979 - photosynthesis, GO:0006879 - cellular iron ion homeostasis, GO:0009737 - response to abscisic acid stimulus, GO:0008199 - ferric iron binding, GO:0048366 - leaf development, GO:0010039 - response to iron ion, GO:0009617 - response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009535 - chloroplast thylakoid membrane, GO:0005739 - mitochondrion, GO:0009908 - flower development",null,null,"Os11g0106700","LOC_Os11g01530.1, LOC_Os11g01530.2","Os03g0843300","Os01g0968800","Os04g0538900",4.7726855,0,null,"_","OsRRMh, RRMh","_","OsRRM homologue",9," Character as QTL - Yield and productivity","GO:0000166 - nucleotide binding, GO:0003676 - nucleic acid binding","TO:0000449 - grain yield per plant",null,"Os09g0516300","LOC_Os09g34070.1, LOC_Os09g34070.2"]
[{"$nulls":23},"Os03g0158300","Os10g0492400","Os10g0527800","Os10g0527800",-1.5965699,-2.9627552,null,"Os06g0594600",4.1110673,"Os02g0806600",-1.440251,{"$nulls":29},"TCD11","RPS6, OsRPS6, OsTCD11","THERMO-SENSITIVE CHLOROPHYLL-DEFICIENT MUTANT 11","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6",12," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0003735 - structural constituent of ribosome, GO:0042255 - ribosome assembly, GO:0009266 - response to temperature stimulus, GO:0070181 - SSU rRNA binding, GO:0009658 - chloroplast organization, GO:0009409 - response to cold, GO:0005840 - ribosome, GO:0006412 - translation","TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content, TO:0000295 - chlorophyll-b content, TO:0000303 - cold tolerance, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000432 - temperature response trait","PO:0025034 - leaf ","Os12g0563200","LOC_Os12g37610.1",{"$nulls":7},"SAUR32","OsSAUR32","SMALL AUXIN-UP RNA 32","Small auxin-up RNA 32",8," Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009733 - response to auxin stimulus","TO:0000565 - spikelets per panicle length, TO:0000163 - auxin sensitivity",null,"Os08g0118800","LOC_Os08g02530.1",{"$nulls":6},"qSH-2-1(t) (QSh2)","qSH-2-1(t) (QSh2)","Shattering (QTL)-2-1(t)","Shattering (QTL)-2-1(t)",2," Seed - Physiological traits - Shattering",{"$nulls":11},"FER2","OsFER2, OsFer2","FERRITIN 2",null,12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009570 - chloroplast stroma, GO:0010039 - response to iron ion, GO:0009617 - response to bacterium, GO:0010043 - response to zinc ion, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009941 - chloroplast envelope, GO:0015979 - photosynthesis, GO:0009535 - chloroplast thylakoid membrane, GO:0005739 - mitochondrion, GO:0008199 - ferric iron binding, GO:0016491 - oxidoreductase activity, GO:0042542 - response to hydrogen peroxide, GO:0046688 - response to copper ion, GO:0006879 - cellular iron ion homeostasis, GO:0009908 - flower development, GO:0006826 - iron ion transport, GO:0048366 - leaf development, GO:0070288 - ferritin complex","TO:0000021 - copper sensitivity, TO:0000432 - temperature response trait",null,"Os12g0106000","LOC_Os12g01530.1, LOC_Os12g01530.2, LOC_Os12g01530.3","Os08g0189900","Os03g0192500","Os12g0106300",4.7552133,0,null,"FC24","OsUGE2, UGE2, OsFC24, BZ1, OsBZ1","FRAGILE CULM 24","UDP-glucose epimerase 2, fragile culm 24, brittle stem and zebra leaf 1",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0006012 - galactose metabolic process, GO:0005795 - Golgi stack, GO:0003978 - UDP-glucose 4-epimerase activity, GO:0009664 - plant-type cell wall organization, GO:0010215 - cellulose microfibril organization, GO:0009658 - chloroplast organization, GO:0005829 - cytosol, GO:0010405 - arabinogalactan protein metabolic process, GO:0050662 - coenzyme binding, GO:0042546 - cell wall biogenesis, GO:0010053 - root epidermal cell differentiation, GO:0009969 - xyloglucan biosynthetic process, GO:0006950 - response to stress","TO:0000590 - grain weight, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000346 - tiller number, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000731 - lignin content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000051 - stem strength","PO:0009047 - stem , PO:0025034 - leaf ","Os08g0374800","LOC_Os08g28730.1"]
[{"$nulls":23},"Os03g0161600","Os07g0581366","Os12g0123200","Os12g0123200",-1.7580153,-0.99257296,null,"Os03g0215700",4.105267,"Os03g0820400",-1.4386396,{"$nulls":29},"_","OsEno3, Eno3","_","enolase 3",3," Biochemical character,  Vegetative organ - Leaf","GO:0000287 - magnesium ion binding, GO:0000015 - phosphopyruvate hydratase complex, GO:0004634 - phosphopyruvate hydratase activity, GO:0006096 - glycolysis, GO:0048366 - leaf development","TO:0000655 - leaf development trait","PO:0001050 - leaf development stage , PO:0005020 - vascular bundle , PO:0009010 - seed ","Os03g0266200","LOC_Os03g15950.1",{"$nulls":7},"SIZ1","OsSIZ1, OsSIZ1.1, OsSIZ1.2, OsSIZ1.3, DLN131, OsDLN131, OsPHD23, PHD23","_","SAP and MIZ 1, SUMO ligase Siz1, Siz/PIAS-type SUMO ligase 1, SIZ/PIAS-type SUMO E3 ligase 1, E3 SUMO-protein ligase SIZ1, DLN repressor 131, DLN motif protein 131, Plant homeo-domain finger protein 23, PHD finger protein 23",5," Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009901 - anther dehiscence, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0003676 - nucleic acid binding, GO:0016874 - ligase activity","TO:0000342 - panicle axis angle, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000146 - seed length, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0125000","LOC_Os05g03430.3, LOC_Os05g03430.2, LOC_Os05g03430.1",{"$nulls":6},"qSH-3-1(t) (QSh3)","qSH-3-1(t) (QSh3)","Shattering (QTL)-3-1(t)","Shattering (QTL)-3-1(t)",3," Seed - Physiological traits - Shattering",{"$nulls":11},"LOX1","OsLOX1, OsLOX5","LIPOXYGENASE 1","lipoxygenase 1, Probable lipoxygenase 4, lipoxygenase 5",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016165 - lipoxygenase activity, GO:0031408 - oxylipin biosynthetic process, GO:0005506 - iron ion binding, GO:0055114 - oxidation reduction, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os03g0700700","LOC_Os03g49380.3, LOC_Os03g49380.2, LOC_Os03g49380.1","Os08g0300300","Os07g0682000","Os01g0880800",4.683676,0,null,"MIR156E","miR156e, OsmiR156e, osmiR156e, osa-miR156e, osa-MIR156e","MICRORNA156E","micro RNA 156e, microRNA156e, osa-miRNA156e",4," Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0050832 - defense response to fungus, GO:0010050 - vegetative phase change, GO:0016442 - RNA-induced silencing complex","TO:0000357 - growth and development trait, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000576 - stem length, TO:0002637 - leaf size, TO:0006032 - panicle size"]
[{"$nulls":23},"Os03g0239000","Os07g0510200","Os07g0209000","Os07g0209000",-1.8521515,-1.5298886,null,"Os04g0115700",4.0953746,"Os05g0127300",-1.4382596,{"$nulls":29},"WSP1","OsWSP1, OsMORF2b, MORF2b, OsMORF2, OsMORF2/WSP1","WHITE-STRIPE LEAVES AND PANICLES 1","white-stripe leaves and panicles 1, multiple organellar RNA editing factor 2b",4," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009658 - chloroplast organization, GO:0009451 - RNA modification, GO:0042254 - ribosome biogenesis, GO:0008380 - RNA splicing","TO:0000201 - panicle color, TO:0000495 - chlorophyll content, TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait, TO:0000655 - leaf development trait, TO:0006001 - salt tolerance","PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0001050 - leaf development stage ","Os04g0601800","LOC_Os04g51280.1",{"$nulls":7},"SIZ2","OsSIZ2","_","SAP and MIZ 2, SIZ/PIAS-type SUMO E3 ligase 2",3," Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009901 - anther dehiscence, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0019789 - SUMO ligase activity, GO:0051301 - cell division, GO:0016049 - cell growth, GO:0048653 - anther development, GO:0048316 - seed development, GO:0009910 - negative regulation of flower development, GO:0016925 - protein sumoylation, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0040008 - regulation of growth, GO:0010337 - regulation of salicylic acid metabolic process, GO:0050826 - response to freezing, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding","TO:0000146 - seed length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0001004 - anther development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os03g0719100","LOC_Os03g50980.1",{"$nulls":6},"qSH-4-1(t) (QSh4)","qSH-4-1(t) (QSh4)","Shattering (QTL)-4-1(t)","Shattering (QTL)-4-1(t)",4," Seed - Physiological traits - Shattering",{"$nulls":11},"LSI6","Lsi6, OsNIP2;2, NIP2-2, OsLsi6, OsNIP2.2/OsLsi6, OsNIP2.2, NIP2.2","LOW SILICON RICE 6","Low silicon rice 6, Aquaporin NIP2-2, NOD26-like intrinsic protein 2-2",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0010035 - response to inorganic substance, GO:0015104 - antimonite transmembrane transporter activity, GO:0046685 - response to arsenic, GO:0016021 - integral to membrane, GO:0032523 - silicon efflux transmembrane transporter activity, GO:0005215 - transporter activity, GO:0042594 - response to starvation, GO:0051207 - silicic acid transport, GO:0055085 - transmembrane transport","TO:0000031 - silicon sensitivity, TO:0000007 - sulfur sensitivity","PO:0020141 - stem node ","Os06g0228200","LOC_Os06g12310.1","Os02g0465900","Os09g0524800","Os03g0432100",4.6538124,0,null,"MIR156F","miR156f, osmiR156f, OsmiR156f, osa-miR156f, osa-MIR156fosa-miR156f-3p osa-miR156f-5p","MICRORNA156F","micro RNA 156f, microRNA156f, osa-miRNA156f",8," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0050832 - defense response to fungus, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000074 - blast disease"]
[{"$nulls":23},"Os03g0243700","Os06g0677400","Os05g0301500","Os05g0301500",-1.8751029,-1.0711902,null,"Os01g0118300",4.094637,"Os06g0125500",-1.4356852,{"$nulls":29},"BKL",null,"BLANKET LEAF",null,6," Vegetative organ - Leaf",null,"TO:0002722 - leaf pubescence, TO:0001018 - transpiration rate, TO:0001017 - water use efficiency, TO:0000504 - leaf temperature",{"$nulls":10},"ERF1","Os06ERF, OsWR2, WR2, OsERF#001, OsERF001, OsERF1, AP2/EREBP#057, AP2/EREBP57, RD1, OsSHN, SHN","ETHYLENE RESPONSE FACTOR 1","ethylene response factor on chromosome 6, rice wax synthesis regulatory gene 2, wax synthesis regulator 2, Wax Synthesis Regulatory 2, ethylene response factor 1, APETALA2/ethylene-responsive element binding protein 57, Rice Drought-responsive gene 1, SHINE",6," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0010166 - wax metabolic process, GO:0010143 - cutin biosynthetic process, GO:0006351 - transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009751 - response to salicylic acid stimulus","TO:0000276 - drought tolerance, TO:0000709 - leaf gloss, TO:0000172 - jasmonic acid sensitivity",null,"Os06g0604000","LOC_Os06g40150.1",{"$nulls":6},"qSH-5-1(t) (QSh5)","qSH-5-1(t) (QSh5)","Shattering (QTL)-5-1(t)","Shattering (QTL)-5-1(t)",5," Seed - Physiological traits - Shattering",{"$nulls":11},"NAAT1","OsNAAT1","NICOTINAMINE AMINOTRANSFERASE 1","sativa nicotianamine aminotransferase 1, nicotianamine aminotransferase",2," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009058 - biosynthetic process, GO:0046394 - carboxylic acid biosynthetic process, GO:0042594 - response to starvation, GO:0006826 - iron ion transport, GO:0006519 - cellular amino acid and derivative metabolic process, GO:0046688 - response to copper ion, GO:0009739 - response to gibberellin stimulus, GO:0033855 - nicotianamine aminotransferase activity, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0034224 - cellular response to zinc ion starvation, GO:0010106 - cellular response to iron ion starvation, GO:0008652 - cellular amino acid biosynthetic process, GO:0009536 - plastid, GO:0008483 - transaminase activity","TO:0000351 - zinc sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000224 - iron sensitivity, TO:0000021 - copper sensitivity","PO:0000071 - companion cell , PO:0000258 - root cortex , PO:0000272 - protoxylem , PO:0005772 - exodermis , PO:0020124 - root stele , PO:0006036 - root epidermis , PO:0006203 - pericycle , PO:0009005 - root , PO:0009006 - shoot system , PO:0009010 - seed ","Os02g0306401","LOC_Os02g20360.2, LOC_Os02g20360.1","Os02g0782500","Os06g0231600","Os02g0809800",4.45799,0,null,"MIR396C","miR396c, osa-miR396c, osa-MIR396c, osa-miR396c-3p, osa-miR396c-5p, OsmiR396c","MICRORNA396C","MICRORNA396c, osa-miRNA396c",2," Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0009409 - response to cold, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000397 - grain size, TO:0000396 - grain yield"]
[{"$nulls":23},"Os03g0266200","Os03g0781400","Os09g0467200","Os09g0467200",-1.9053453,-1.392368,null,"Os03g0233000",4.0902686,"Os10g0377400",-1.4349331,{"$nulls":29},"SLAC7","OsSLAC7","SLOW ANION CHANNEL 7","SLOW ANION CHANNEL-ASSOCIATED 7",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0010117 - photoprotection, GO:0008308 - voltage-gated anion channel activity, GO:0006873 - cellular ion homeostasis, GO:0005886 - plasma membrane, GO:0005737 - cytoplasm, GO:0005634 - nucleus","TO:0000137 - days to heading, TO:0000089 - panicle type, TO:0006001 - salt tolerance, TO:0002655 - starch grain size, TO:0000495 - chlorophyll content, TO:0000492 - leaf shape, TO:0000316 - photosynthetic ability, TO:0002667 - abscisic acid content, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000227 - root length, TO:0000075 - light sensitivity","PO:0020104 - leaf sheath ","Os01g0385400","LOC_Os01g28840.1",{"$nulls":7},"ERF3","Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12","ETHYLENE RESPONSE FACTOR 3","ethylene response factor on chromosome 2, rice wax synthesis regulatory gene 1, wax synthesis regulator 1, Wax Synthesis Regulatory 1, ethylene response factor 3, APETALA2/ethylene-responsive element binding protein 12",2," Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009814 - defense response, incompatible interaction, GO:0010143 - cutin biosynthetic process, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0002213 - defense response to insect, GO:0010166 - wax metabolic process, GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding","TO:0000276 - drought tolerance, TO:0000709 - leaf gloss, TO:0000424 - brown planthopper resistance",null,"Os02g0202000","LOC_Os02g10760.1",{"$nulls":6},"qSH-9-1(t) (QSh9)","qSH-9-1(t) (QSh9)","Shattering (QTL)-9-1(t)","Shattering (QTL)-9-1(t)",9," Seed - Physiological traits - Shattering",{"$nulls":11},"NRAMP4","OsNRAMP4, Nrat1, Nramp6, OsNRAT1, FCO5","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 4","BACTERIOCIDE EFFECT 4, Nramp aluminum transporter 1, Functioning in Cesium Over-transport 5",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015083 - aluminum ion transmembrane transporter activity, GO:0010044 - response to aluminum ion, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport","TO:0000354 - aluminum sensitivity","PO:0025034 - leaf ","Os02g0131800","LOC_Os02g03900.1","Os04g0543700","Os05g0402900","Os12g0568200",4.445687,0,null,"MIR397A","miR397a, osa-miR397a, osa-MIR397a, OsmiR397a","MICRORNA397A","MICRORNA397a, osa-miRNA397a",6," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009414 - response to water deprivation, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000276 - drought tolerance, TO:0000180 - spikelet fertility, TO:0000605 - hydrogen peroxide content"]
[{"$nulls":23},"Os03g0267300","Os01g0805300","Os02g0717700","Os02g0717700",-1.9944032,-1.3834342,null,"Os01g0832100",4.0837235,"Os05g0450300",-1.4306365,{"$nulls":29},"PLS2","SQD2.3, OsSQD2.3","PREMATURE LEAF SENESCENT 2","sulfoquinovosyl transferase-like protein 2.3, Sulfoquinovosyldiacylglycerol synthase 2.3, Premature Leaf Senescent 2, premature leaf senescence 2",3," Biochemical character,  Vegetative organ - Leaf","GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0046510 - UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, GO:0009247 - glycolipid biosynthetic process, GO:0009941 - chloroplast envelope, GO:0046506 - sulfolipid biosynthetic process, GO:0005783 - endoplasmic reticulum","TO:0000328 - sucrose content, TO:0000326 - leaf color, TO:0001018 - transpiration rate, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content, TO:0000522 - stomatal conductance, TO:0001027 - net photosynthetic rate","PO:0005645 - leaf mesophyll , PO:0001054 - 4 leaf senescence stage ","Os03g0265100","LOC_Os03g15840.1",{"$nulls":7},"_","OsLOL1, OsSTA289, OsLSD1","_","LSD1-like 1",12," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus",null,"PO:0009066 - anther ","Os12g0611000","LOC_Os12g41700.1",{"$nulls":6},"RSUS1","sus1, RSus1(t), SUS1, SS2, OsScS2, RSs2, RSus1, SuSy1, OsSUS1, RSS2, RSus2, OsRSUS1","SUCROSE SYNTHASE 1","sucrose synthase1, Sucrose synthase 1, Sucrose synthase 2, Sucrose-UDP glucosyltransferase 1, Sucrose synthase-2, rice SuSy gene 2, sucrose-UDP glucosyltransferase isozyme 2",3," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0006970 - response to osmotic stress, GO:0009413 - response to flooding, GO:0046686 - response to cadmium ion, GO:0009058 - biosynthetic process, GO:0051781 - positive regulation of cell division, GO:0005985 - sucrose metabolic process, GO:0009409 - response to cold, GO:0005886 - plasma membrane, GO:0016157 - sucrose synthase activity, GO:0010037 - response to carbon dioxide, GO:0005773 - vacuole","TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000449 - grain yield per plant",null,"Os03g0401300","LOC_Os03g28330.1, LOC_Os03g28330.2, LOC_Os03g28330.5, LOC_Os03g28330.4, LOC_Os03g28330.3",{"$nulls":6},"LCD1","NRAMP5, OsNRAMP5, OsNramp5, OsLCD1","LOW CADMIUM ACCUMULATION 1","BACTERIOCIDE EFFECT 5, NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 5, low cadmium accumulation 1",7," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010033 - response to organic substance, GO:0006811 - ion transport, GO:0007623 - circadian rhythm, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0009088 - threonine biosynthetic process, GO:0006523 - alanine biosynthetic process, GO:0006537 - glutamate biosynthetic process, GO:0015691 - cadmium ion transport, GO:0055072 - iron ion homeostasis, GO:0005886 - plasma membrane, GO:0010378 - temperature compensation of the circadian clock, GO:0010233 - phloem transport, GO:0009266 - response to temperature stimulus, GO:0046686 - response to cadmium ion, GO:0006828 - manganese ion transport, GO:0009094 - L-phenylalanine biosynthetic process","TO:0000044 - stigma exsertion, TO:0002673 - amino acid content, TO:0000388 - forage yield, TO:0000397 - grain size, TO:0000432 - temperature response trait","PO:0005059 - root endodermis , PO:0005772 - exodermis ","Os07g0257200","LOC_Os07g15370.1, LOC_Os07g15370.2","Os12g0603800","Os04g0518100","Os11g0559200",4.4121723,0,null,"MIR397B","miR397b, osa-miR397b, osa-MIR397b, miR397b*, OsmiR397b, Os-MIR397b","MICRORNA397B","MICRORNA397b, osa-miRNA397b",2," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage","TO:0000180 - spikelet fertility, TO:0000605 - hydrogen peroxide content","PO:0020141 - stem node "]
[{"$nulls":23},"Os03g0329500","Os05g0247100","Os01g0883800","Os01g0883800",-2.0003462,1.0044001,null,"Os10g0390600",4.0828304,"Os03g0852500",-1.4301647,{"$nulls":29},"_","HAL1","_","half-pipe-like leaf1, half-pipe-like leaf 1",null," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000149 - seed width, TO:0000564 - spikelet width, TO:0002637 - leaf size, TO:0002681 - leaf curling, TO:0000614 - lemma shape, TO:0000575 - endosperm related trait","PO:0004001 - bulliform cell ",{"$nulls":9},"TIFY8","OsJAZ12, OsTIFY8, OsSTA75","TIFY GENE 8","Jasmonate ZIM-domain protein 12",2," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0732400","LOC_Os02g49970.1",{"$nulls":6},"RSUS2","sus2, RSus2(t), SUS2, SS1, OsScS1, RSs1, RSus2, OsSUS2, RSS1, RSus1, OsSusy2, Susy2","SUCROSE SYNTHASE 2","sucrose synthase2, Sucrose synthase 2, Sucrose synthase 1, Sucrose-UDP glucosyltransferase 2, Sucrose synthase-1, rice SuSy gene 1, sucrose-UDP glucosyltransferase isozyme 1, sucrose synthase l, rice sucrose synthase-1",6," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046686 - response to cadmium ion, GO:0051781 - positive regulation of cell division, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0009555 - pollen development, GO:0005985 - sucrose metabolic process, GO:0009413 - response to flooding, GO:0006970 - response to osmotic stress, GO:0009058 - biosynthetic process, GO:0016157 - sucrose synthase activity, GO:0005773 - vacuole","TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000432 - temperature response trait, TO:0000396 - grain yield, TO:0000286 - submergence sensitivity, TO:0000592 - 1000-dehulled grain weight","PO:0001007 - pollen development stage ","Os06g0194900","LOC_Os06g09450.2, LOC_Os06g09450.8, LOC_Os06g09450.7, LOC_Os06g09450.6, LOC_Os06g09450.3, LOC_Os06g09450.1, LOC_Os06g09450.4, LOC_Os06g09450.5",{"$nulls":6},"NRAMP6","OsNRAMP6, Nramp6, l-NRAMP6, s-NRAMP6, OsNramp6.8, OsNramp1","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 6","BACTERIOCIDE EFFECT 6, Natural resistance-associated macrophage protein 6",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006826 - iron ion transport, GO:0016021 - integral to membrane, GO:0055072 - iron ion homeostasis, GO:0006811 - ion transport, GO:0005215 - transporter activity, GO:0009814 - defense response, incompatible interaction, GO:0051707 - response to other organism, GO:0030001 - metal ion transport, GO:0006828 - manganese ion transport, GO:0005886 - plasma membrane, GO:0031348 - negative regulation of defense response, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000074 - blast disease, TO:0000112 - disease resistance",null,"Os01g0503400","LOC_Os01g31870.8, LOC_Os01g31870.7, LOC_Os01g31870.6, LOC_Os01g31870.1, LOC_Os01g31870.2, LOC_Os01g31870.3, LOC_Os01g31870.4, LOC_Os01g31870.5","Os05g0346200","Os11g0556400","Os06g0247500",4.3934584,0,null,"MIR398A","miR398a, osa-miR398a, osa-MIR398a","MICRORNA398A","MICRORNA398a, osa-miRNA398a",10," Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex","TO:0000149 - seed width, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000592 - 1000-dehulled grain weight"]
[{"$nulls":23},"Os03g0401300","Os03g0163200","Os04g0643100","Os04g0643100",-2.052673,-1.5294367,null,"Os02g0723400",4.078456,"Os04g0352400",-1.4278479,{"$nulls":29},"_","OsEXPLA1, EXPLA1, RIP3","_","expansion-like A1, REL1-interacting protein 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0050793 - regulation of developmental process, GO:0005576 - extracellular region","TO:0000206 - leaf angle, TO:0000207 - plant height",null,"Os03g0132200","LOC_Os03g04020.1, LOC_Os03g04020.2",{"$nulls":7},"EPR1","OsEPR1, OsLHY, LHY","EARLY PHYTOCHROME RESPONSIVE 1","MYB transcription factor, OsLHY-like_chr.6, EARLY PHYTOCHROME RESPONSIVE1, EARLY PHYTOCHROME RESPONSIVE 1",6," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0007623 - circadian rhythm, GO:0010208 - pollen wall assembly, GO:0048653 - anther development, GO:0009266 - response to temperature stimulus, GO:0009629 - response to gravity, GO:0009555 - pollen development","TO:0002693 - gravity response trait, TO:0000437 - male sterility, TO:0000432 - temperature response trait","PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os06g0728700","LOC_Os06g51260.2, LOC_Os06g51260.1",{"$nulls":6},"RSUS3","RSus3(t), SUS3, SS3, OsScS3, RSs3, RSus3, OsSUS3, RSS3, OsEnS-111, Susy3, OsSusy3","SUCROSE SYNTHASE 3","Rice sucrose synthase-3(t), Sucrose synthase 3, Sucrose-UDP glucosyltransferase 3, Sucrose synthase-3, rice SuSy gene 3, endosperm-specific gene 111",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0030244 - cellulose biosynthetic process, GO:0009555 - pollen development, GO:0010581 - regulation of starch biosynthetic process, GO:0009960 - endosperm development, GO:0010410 - hemicellulose metabolic process, GO:0052324 - cell wall cellulose biosynthetic process, GO:0005773 - vacuole, GO:0046686 - response to cadmium ion, GO:0051321 - meiotic cell cycle, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress, GO:0010229 - inflorescence development, GO:0009409 - response to cold, GO:0009413 - response to flooding, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process, GO:0048316 - seed development, GO:0009723 - response to ethylene stimulus, GO:0009873 - ethylene mediated signaling pathway, GO:0016157 - sucrose synthase activity","TO:0000173 - ethylene sensitivity, TO:0000575 - endosperm related trait, TO:0000457 - total biomass yield, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000391 - seed size, TO:0000592 - 1000-dehulled grain weight, TO:0000449 - grain yield per plant, TO:0000734 - grain length, TO:0000068 - lodging incidence, TO:0000696 - starch content, TO:0000396 - grain yield, TO:0000114 - flooding related trait, TO:0000590 - grain weight","PO:0001007 - pollen development stage , PO:0009089 - endosperm , PO:0007633 - endosperm development stage , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os07g0616800","LOC_Os07g42490.2, LOC_Os07g42490.1",{"$nulls":6},"HB4","OSHB4, OsHox32, HOX32, OsHB4, Oshox32, PHB3","HOMEODOMAIN CONTAINING PROTEIN 4","Homeobox-leucine zipper protein HOX32, Homeodomain transcription factor HOX32, HD-ZIP protein HOX32, rice homeobox gene 32",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0048366 - leaf development, GO:0009416 - response to light stimulus, GO:0042546 - cell wall biogenesis, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009733 - response to auxin stimulus, GO:0046686 - response to cadmium ion, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000051 - stem strength, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000615 - abscisic acid sensitivity, TO:0000085 - leaf rolling, TO:0000075 - light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000206 - leaf angle","PO:0001050 - leaf development stage ","Os03g0640800","LOC_Os03g43930.2, LOC_Os03g43930.1","Os03g0818800","Os06g0548200","Os04g0654600",4.376442,0,null,"MIR1848","miR1848, osa-miR1848, osa-MIR1848","MICRORNA1848","MICRORNA1848, osa-miRNA1848",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009651 - response to salt stress, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0009414 - response to water deprivation, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0007623 - circadian rhythm","TO:0000053 - pollen sterility, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0006031 - inflorescence size, TO:0000445 - seed number, TO:0000207 - plant height"]
[{"$nulls":23},"Os03g0412800","Os12g0637400","Os01g0911200","Os01g0911200",-2.1716025,-1.026611,null,"Os04g0672300",4.0744934,"Os09g0369500",-1.4270524,{"$nulls":29},"_","OsLIL3, LIL3","_","light-harvesting-like protein 3",2," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0009658 - chloroplast organization, GO:0055085 - transmembrane transport, GO:0009535 - chloroplast thylakoid membrane, GO:0009507 - chloroplast, GO:0015995 - chlorophyll biosynthetic process, GO:0009642 - response to light intensity, GO:0022891 - substrate-specific transmembrane transporter activity","TO:0000152 - panicle number, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000460 - light intensity sensitivity, TO:0000456 - spikelet number, TO:0000496 - carotenoid content",null,"Os02g0125700","LOC_Os02g03330.1",{"$nulls":7},"GIF3","OsGIF3, OsGIF1, GIF1, MKB3","GRF-INTERACTING FACTOR 3","GRF1-interacting factor 3, GRF-interacting factor 3, Growth-regulating factor interacting factor 1, GRF interacting factor 1, MAKIBA3, MAKIBA 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008283 - cell proliferation, GO:0022414 - reproductive process, GO:0016049 - cell growth, GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0009555 - pollen development, GO:0048481 - ovule development, GO:0048366 - leaf development, GO:0009955 - adaxial/abaxial pattern formation, GO:0080060 - integument development","TO:0002686 - cell growth and development trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0000370 - leaf width, TO:0000084 - root number, TO:0000306 - root thickness, TO:0000484 - seed shape, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0000655 - leaf development trait, TO:0000485 - sterility related trait, TO:0002637 - leaf size, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait","PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0001007 - pollen development stage , PO:0007619 - ovule development stage , PO:0000017 - vascular leaf primordium ","Os03g0733600","LOC_Os03g52320.2, LOC_Os03g52320.1",{"$nulls":6},"TF1","OSTF1(t), OsTF1","TRANSCRIPTION FACTOR 1","Oryza sativa transcription factor 1(t), Homeobox-leucine zipper protein TF1, Homeodomain transcription factor TF1, HD-ZIP protein TF1, Protein TRANSCRIPTION FACTOR 1",1," Seed - Morphological traits - Embryo","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding",null,null,"Os01g0788800","LOC_Os01g57890.1, LOC_Os01g57890.2",{"$nulls":6},"PDR6","OsPDR6, OsABCG31, OsABCG31_1","PLEIOTROPIC DRUG RESISTANCE 6","sativa pleiotropic drug resistance 6, Pleiotropic drug resistance protein 6, ABC transporter superfamily ABCG subgroup member 31, ATP-binding Cassette Transporter G31",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0006810 - transport, GO:0042335 - cuticle development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0016021 - integral to membrane, GO:0010143 - cutin biosynthetic process","TO:0000074 - blast disease, TO:0000207 - plant height",null,"Os01g0177900","LOC_Os01g08260.1, LOC_Os01g08260.2","Os01g0190300","Os04g0481700","Os09g0474000",4.3198514,0,null,"MIR1871","miR1871, osa-miR1871, osa-MIR1871","MICRORNA1871","MICRORNA1871, osa-miRNA1871",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0002679 - respiratory burst during defense response, GO:0009414 - response to water deprivation, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000371 - yield trait, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000152 - panicle number, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0025034 - leaf "]
[{"$nulls":23},"Os03g0599800","Os06g0564500","Os01g0949750","Os01g0949750",-2.1948678,-2.3416748,null,"Os01g0717400",4.0662546,"Os07g0613800",-1.4254632,{"$nulls":29},"_","GL6","_","glabrous 6",6," Vegetative organ - Leaf",null,"TO:0002722 - leaf pubescence",{"$nulls":10},"LABA1","LOGL6, OsLOGL6, An-2","LONG AND BARBED AWN 1","LOG LIKE phosphoribohydrolase 6, LOG LIKE 6, LOG-like 6, Lonely Guy Like protein 6, long and barbed awn 1, Awn-2",4," Biochemical character,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080038 - positive regulation of cytokinin mediated signaling, GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds, GO:0009821 - alkaloid biosynthetic process, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0009691 - cytokinin biosynthetic process","TO:0000346 - tiller number, TO:0002660 - cytokinin content, TO:0000396 - grain yield, TO:0002759 - grain number, TO:0002718 - awn anatomy and morphology trait, TO:0000072 - awn length",null,"Os04g0518800","LOC_Os04g43840.1",{"$nulls":6},"SK1","sk1(t)**, slk1, sk1*","SLENDER KERNEL 1","slender kernel1(t)**, slender kernel-1",2," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000287 - brown rice shape, TO:0000149 - seed width","PO:0009010 - seed ",{"$nulls":8},"PDR9","OsPDR9, ospdr9, OsPDR3, PDR3, OsABCG36/OsPDR9, OsABCG36","PLEIOTROPIC DRUG RESISTANCE 9","pleiotropic drug resistance 9, PDR-type ABC transporter 9, sativa pleiotropic drug resistance 3, pleiotropic drug resistance 3, Pleiotropic drug resistance protein 3",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0005524 - ATP binding, GO:0016020 - membrane, GO:0050832 - defense response to fungus, GO:0016887 - ATPase activity, GO:0006810 - transport","TO:0000074 - blast disease",null,"Os01g0609300","LOC_Os01g42380.1","Os01g0741200","Os02g0170100","Os05g0583600",4.2936397,0,null,"MIR1432","miR1432, osa-miR1432, osa-miR1432-5p, osa-MIR1432","MICRORNA1432","MICRORNA1432, osa-miRNA1432",7," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0046686 - response to cadmium ion, GO:0002238 - response to molecule of fungal origin, GO:0052542 - callose deposition during defense response, GO:0042742 - defense response to bacterium, GO:0080050 - regulation of seed development, GO:0010200 - response to chitin, GO:0035195 - gene silencing by miRNA, GO:0002237 - response to molecule of bacterial origin, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000074 - blast disease, TO:0002667 - abscisic acid content, TO:0000149 - seed width, TO:0000605 - hydrogen peroxide content, TO:0000304 - seed thickness, TO:0000396 - grain yield, TO:0002672 - auxin content, TO:0000371 - yield trait, TO:0000152 - panicle number, TO:0000175 - bacterial blight disease resistance"]
[{"$nulls":23},"Os03g0603600","Os06g0727300","Os04g0117900","Os04g0117900",-2.314095,-1.5737028,null,"Os01g0816500",4.0651107,"Os01g0623200",-1.4254503,{"$nulls":29},"S40-2","OsS40-2","S40 PROTEIN 2","S40 protein 2",5," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009646 - response to absence of light, GO:0009753 - response to jasmonic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0005634 - nucleus, GO:0010150 - leaf senescence","TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000460 - light intensity sensitivity, TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage , PO:0009010 - seed ","Os05g0518800","LOC_Os05g44260.1",{"$nulls":7},"_","OsNek3, OsSTA192","_","NIMA-related kinase 3",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding",null,"PO:0009066 - anther ","Os07g0176600","LOC_Os07g08000.1",{"$nulls":6},"SK2","Sk2(t)**, Slk2, Sk2*","SLENDER  KERNEL 2","Slender kernel2(t), Slender kernel-2",5," Seed - Morphological traits - Grain shape","GO:0007275 - multicellular organismal development","TO:0000287 - brown rice shape, TO:0000149 - seed width","PO:0009010 - seed ",{"$nulls":8},"RDR1","OsRDR1","RNA-DEPENDENT RNA POLYMERASE 1","RNA-dependent RNA polymerase 1, Probable RNA-dependent RNA polymerase 1",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0031047 - gene silencing by RNA, GO:0051607 - defense response to virus, GO:0003968 - RNA-directed RNA polymerase activity, GO:0003723 - RNA binding","TO:0000148 - viral disease resistance",null,"Os02g0736200","LOC_Os02g50330.1","Os10g0419400","Os09g0241100","Os09g0262000",4.210138,0,null,"MIR5144","miR5144, osa-miR5144, osa-MIR5144, MIR5144-5p, MIR5144-3posa-miR5144-3p osa-miR5144-5p","MICRORNA5144","MICRORNA5144, osa-miRNA5144, MicroRNA5144-3p",1," Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009408 - response to heat, GO:0010229 - inflorescence development, GO:0046689 - response to mercury ion, GO:0055122 - response to very low light intensity stimulus, GO:0048316 - seed development, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0000382 - 1000-seed weight, TO:0000653 - seed development trait, TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000621 - inflorescence development trait, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009047 - stem "]
[{"$nulls":23},"Os03g0735000","Os10g0539600","Os07g0694700","Os07g0694700",-2.9320633,-1.2588414,null,"Os05g0119700",4.0630193,"Os06g0128400",-1.4244264,{"$nulls":29},"S40-4","OsS40-4","S40 PROTEIN 4","S40 protein 4",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus","TO:0000074 - blast disease, TO:0000011 - nitrogen sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000172 - jasmonic acid sensitivity","PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence , PO:0020148 - shoot apical meristem , PO:0025034 - leaf , PO:0009010 - seed , PO:0009005 - root ","Os03g0113900","LOC_Os03g02280.1",{"$nulls":7},"_","SIP2, OsSIP2, OsFIP, FIP","_","SKIP interacting protein 2, SKIPa-interacting protein 2, SKIPa-interacting protein 2",6," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Embryo,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009506 - plasmodesma, GO:0007276 - gamete generation, GO:0009556 - microsporogenesis, GO:0000278 - mitotic cell cycle, GO:0005634 - nucleus, GO:0005856 - cytoskeleton, GO:0006396 - RNA processing, GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome, GO:0001510 - RNA methylation, GO:0009790 - embryonic development, GO:0048236 - plant-type spore development","TO:0000437 - male sterility, TO:0000727 - sporogenesis, TO:0000620 - embryo development trait, TO:0000445 - seed number, TO:0000180 - spikelet fertility, TO:0000455 - seed set percent, TO:0000531 - anther length, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000485 - sterility related trait","PO:0007631 - plant embryo stage , PO:0020048 - microspore , PO:0025543 - tapetum cell ","Os06g0474200 ","LOC_Os06g27970.1",{"$nulls":6},"qAC-5-1(t) (qAC-5)","qAC-5-1(t) (qAC-5)","amylose content (QTL)-5-1(t)","amylose content (QTL)-5-1(t)",5," Seed - Physiological traits - Storage substances",{"$nulls":11},"YSL15","OsYSL15, OsYs7","YELLOW STRIP-LIKE GENE 15","rice YSL (yellow stripe-like) gene 15, Iron-phytosiderophore transporter YSL15, Protein YELLOW STRIPE LIKE 15, ferric Fe-DMA transporter OsYSL15, yellow stripe 1-like transporter 15",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0006826 - iron ion transport, GO:0009739 - response to gibberellin stimulus, GO:0009609 - response to symbiotic bacterium, GO:0055085 - transmembrane transport, GO:0042594 - response to starvation, GO:0016021 - integral to membrane, GO:0010039 - response to iron ion, GO:0010106 - cellular response to iron ion starvation, GO:0005506 - iron ion binding, GO:0034224 - cellular response to zinc ion starvation, GO:0046942 - carboxylic acid transport, GO:0006865 - amino acid transport","TO:0000224 - iron sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000351 - zinc sensitivity",null,"Os02g0650300","LOC_Os02g43410.1, LOC_Os02g43410.2","Os05g0564400","Os01g0281200","Os05g0205800",4.208537,0,null,"GW6","OsGSR1, GSR1, OsGASR7, GASR7, OsGW6, OsGASR7/GW6","GRAIN WIDTH 6","GAST family gene in rice 1, GA-stimulated transcript family gene in rice 1, gibberellic acid- stimulated regulator 7",6," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0030307 - positive regulation of cell growth, GO:0009739 - response to gibberellin stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0016132 - brassinosteroid biosynthetic process, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000734 - grain length, TO:0000397 - grain size, TO:0002676 - brassinosteroid content, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002675 - gibberellic acid content, TO:0000206 - leaf angle",null,"Os06g0266800","LOC_Os06g15620.1"]
[{"$nulls":23},"Os03g0736300","Os03g0720300","Os04g0244400","Os04g0244400",-3.0165927,-1.2191443,null,"Os08g0425000",4.0623274,"Os02g0705400",-1.4217519,{"$nulls":29},"S40-5","OsS40-5","S40 PROTEIN 5","S40 protein 5",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0009733 - response to auxin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation","TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os04g0542000 ","LOC_Os04g45834.3, LOC_Os04g45834.2, LOC_Os04g45834.1",{"$nulls":7},"_","OsARF15, ARF15, ETT1, OsETT1, ARF3b, OsARF3-1, ARF3-1, OsARF3, ARF3, DLN154, OsDLN154","_","auxin response factor-15, auxin response factor 15, OsETTIN1, DLN repressor 154, DLN motif protein 154",5," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0090058 - metaxylem development, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009629 - response to gravity, GO:0009734 - auxin mediated signaling pathway","TO:0002693 - gravity response trait, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000614 - lemma shape, TO:0000470 - vascular tissue related trait",null,"Os05g0563400","LOC_Os05g48870.7, LOC_Os05g48870.9, LOC_Os05g48870.8, LOC_Os05g48870.1, LOC_Os05g48870.5, LOC_Os05g48870.6",{"$nulls":6},"qGC-2-1(t) (qGC-2)","qGC-2-1(t) (qGC-2)","gel consistency (QTL)-2-1(t)","gel consistency (QTL)-2-1(t)",2," Seed - Physiological traits - Taste",{"$nulls":11},"YSL9","OsYSL9, OsYs13","YELLOW STRIP-LIKE GENE 9","rice YSL (yellow stripe-like) gene 9, Probable metal-nicotianamine transporter YSL9, Protein YELLOW STRIPE LIKE 9, yellow stripe 1-like transporter 9",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0042594 - response to starvation, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0034755 - iron ion transmembrane transport, GO:0051980 - iron-nicotianamine transmembrane transporter activity","TO:0000224 - iron sensitivity",null,"Os04g0542200","LOC_Os04g45860.1","Os01g0606900","Os01g0646300","Os04g0460600",4.1927667,0,null,"TID1","OsTID1, TubA2, SRS5, OS-TubA2, OsTubA2, OsSRS5","TWISTED DWARF 1","TWISTED DWARF1, Tubulin alpha-2, Tubulin alpha-2 chain, small and round seed 5",11," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003924 - GTPase activity, GO:0009635 - response to herbicide, GO:0046688 - response to copper ion, GO:0007017 - microtubule-based process, GO:0005874 - microtubule, GO:0005737 - cytoplasm, GO:0051510 - regulation of unidimensional cell growth, GO:0005525 - GTP binding, GO:0005200 - structural constituent of cytoskeleton, GO:0051258 - protein polymerization","TO:0000021 - copper sensitivity, TO:0000058 - herbicide sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000391 - seed size",null,"Os11g0247300","LOC_Os11g14220.1"]
[{"$nulls":23},"Os03g0749300","Os05g0192100","Os01g0949700","Os01g0949700",-3.031353,-2.6883936,null,"Os02g0655800",4.0561204,"Os09g0515100",-1.4211426,{"$nulls":29},"S40-7","OsS40-7","S40 PROTEIN 7","S40 protein 7",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010233 - phloem transport, GO:0005737 - cytoplasm, GO:0009651 - response to salt stress","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000590 - grain weight, TO:0000466 - carbon content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0009005 - root ","Os01g0727500 ","LOC_Os01g52730.1",{"$nulls":7},"_","OsARF2, ARF2, OsETT2, ETT2, ARF3a, DLN16, OsDLN16, ARF3","_","auxin response factor-2, auxin response factor 2, OsETTIN2, ETTIN 2, DLN repressor 16, DLN motif protein 16, ARF2-LIKE",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0009415 - response to water, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0009629 - response to gravity","TO:0000655 - leaf development trait, TO:0000207 - plant height, TO:0002718 - awn anatomy and morphology trait, TO:0002693 - gravity response trait, TO:0000237 - water stress trait","PO:0009049 - inflorescence ","Os01g0670800","LOC_Os01g48060.3, LOC_Os01g48060.2, LOC_Os01g48060.1",{"$nulls":6},"qGC-7","qGC-7","gel consistency (QTL)-7","gel consistency (QTL)-7",null," Seed - Physiological traits - Taste",{"$nulls":11},"ZFP177","OsSAP9, SAP9, ZFP33","ZINC FINGER PROTEIN 177","Zinc finger A20 and AN1 domain-containing stress-associated protein 9, stress associated protein 9",7," Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009611 - response to wounding, GO:0009408 - response to heat, GO:0006950 - response to stress","TO:0006001 - salt tolerance, TO:0000164 - stress trait, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance","PO:0001170 - seed development stage ","Os07g0168800","LOC_Os07g07350.1, LOC_Os07g07350.2, LOC_Os07g07350.3","Os01g0253300","Os01g0117000","Os06g0546500",4.1498275,0,null,"LAX2","OsLAX2, Gnp4/LAX2, Gnp4","LAX PANICLE 2","lax panicle2, Grain number per-panicle 4",4," Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0030307 - positive regulation of cell growth","TO:0000163 - auxin sensitivity, TO:0000152 - panicle number, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000382 - 1000-seed weight",null,"Os04g0396500","LOC_Os04g32510.1"]
[{"$nulls":23},"Os03g0749500","Os06g0641800","Os02g0704000","Os02g0704000",-5.3020196,-2.4485574,null,"Os04g0101400",4.050842,"Os05g0486200",-1.4200649,{"$nulls":29},"S40-8","OsS40-8","S40 PROTEIN 8","S40 protein 8",10," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0010150 - leaf senescence","TO:0000074 - blast disease, TO:0000249 - leaf senescence","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os10g0481000 ","LOC_Os10g33990.1",{"$nulls":7},"ASP1","OsLIS-L1, OsWD40-155, ASP1, TPR2, OsTPR2, OsREL2, REL2, OsTPL3, TPL3, OsTPL2, TPL2, ASP-LSL","ABERRANT SPIKELET AND PANICLE 1","Lissencephaly type-1-like 1, ABERRANT SPIKELET AND PANICLE1, TOPLESS-RELATED PROTEIN 2, TOPLESS 3, aberrant spikelet-long sterile lemma, ROMOSA ENHANCER LOCI2",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0010073 - meristem maintenance, GO:0003714 - transcription corepressor activity, GO:0010229 - inflorescence development, GO:0019827 - stem cell maintenance, GO:0009734 - auxin mediated signaling pathway, GO:0010072 - primary shoot apical meristem specification, GO:0005634 - nucleus","TO:0002660 - cytokinin content, TO:0002672 - auxin content, TO:0000040 - panicle length, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0000145 - internode length, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000240 - sterile lemma length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000050 - inflorescence branching, TO:0000152 - panicle number, TO:0002768 - spikelet length, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0002727 - sterile lemma width, TO:0020033 - glume length, TO:0020034 - glume width, TO:0000371 - yield trait, TO:0000621 - inflorescence development trait, TO:0000650 - lemma length, TO:0002675 - gibberellic acid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os08g0162100","LOC_Os08g06480.1",{"$nulls":6},"qASS-6-1(t)","qASS-6-1(t)","alkali spreading score (QTL)-6-1(t)","alkali spreading score (QTL)-6-1(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"ZIP4","OsZIP4","ZINC TRANSPORTER 4","zinc transporter 4, Zrt-Irt-like protein 4, Zinc-regulated transporter 4",8," Tolerance and resistance - Stress tolerance","GO:0005385 - zinc ion transmembrane transporter activity, GO:0030001 - metal ion transport, GO:0016020 - membrane, GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0008270 - zinc ion binding, GO:0006829 - zinc ion transport, GO:0046873 - metal ion transmembrane transporter activity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane","TO:0000351 - zinc sensitivity","PO:0004013 - epidermal cell , PO:0005417 - phloem , PO:0009005 - root , PO:0009006 - shoot system ","Os08g0207500","LOC_Os08g10630.1","Os10g0516100","Os11g0135000","Os05g0140100",4.1362944,0,null,"PIL11","OsPIL11, OsbHLH102, bHLH102, PIF4, OsPIF4","_","PHYTOCHROME INTERACTING FACTOR-LIKE 11, basic helix-loop-helix protein 102, Phytochrome interacting factor 4",12," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009628 - response to abiotic stimulus, GO:0003677 - DNA binding, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000397 - grain size, TO:0002616 - flowering time, TO:0000168 - abiotic stress trait, TO:0000734 - grain length, TO:0000396 - grain yield",null,"Os12g0610200","LOC_Os12g41650.5, LOC_Os12g41650.4, LOC_Os12g41650.3, LOC_Os12g41650.2"]
[{"$nulls":23},"Os03g0781400","Os02g0589000","Os04g0337500","Os04g0337500",7.0970664,6.735754,null,"Os05g0568800",4.048988,"Os11g0631825",-1.4175048,{"$nulls":29},"S40-9","OsS40-9","S40 PROTEIN 9","S40 protein 9",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0010150 - leaf senescence, GO:0005737 - cytoplasm, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage ","Os01g0862600 ","LOC_Os01g64300.1",{"$nulls":7},"SL1","sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB, DLN2, OsDLN2, OsJAG, JAG","STAMENLESS 1","stamenless1, stamenless 1, stamenless-1, open break, pistilloid-stamen, DLN repressor 2, DLN motif protein 2, JAGGED",1," Reproductive organ - Pollination, fertilization, fertility - Other sterilities,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0007275 - multicellular organismal development, GO:0048444 - floral organ morphogenesis","TO:0000437 - male sterility, TO:0000499 - flower anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0006009 - lodicule anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait, TO:0000223 - pistil anatomy and morphology trait","PO:0009037 - lemma , PO:0009082 - spikelet floret , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009038 - palea , PO:0020091 - obsolete microgametophyte ","Os01g0129200","LOC_Os01g03840.1",{"$nulls":6},"qPGWC-8","qPGWC-8","white core grain percentage (QTL)-8","white core grain percentage (QTL)-8",null," Seed - Physiological traits - Taste",{"$nulls":11},"ZIP5","OsZIP5, OsZIP8, ZIP8, OsZIP9","ZINC TRANSPORTER 5","zinc transporter 5, Zrt-Irt-like protein 5, Zinc-regulated transporter 5, zinc transporter 8, Zrt-Irt-like protein 8, zinc transporter 9, Zrt-Irt-like protein 9, Zinc-regulated transporter 9",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0046873 - metal ion transmembrane transporter activity, GO:0030001 - metal ion transport, GO:0005385 - zinc ion transmembrane transporter activity, GO:0006829 - zinc ion transport, GO:0008270 - zinc ion binding, GO:0016020 - membrane",null,null,"Os05g0472700","LOC_Os05g39560.1","Os09g0466100","Os01g0106400","Os02g0723400",4.078456,0,null,"PIL15","OsPIL15, OsbHLH105, PIF3, OsPIF3","PHYTOCHROME INTERACTING FACTOR-LIKE 15","phytochrome-interacting factor-like protein 15, Phytochrome interacting factor 3",1," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009734 - auxin mediated signaling pathway, GO:0009416 - response to light stimulus, GO:0009640 - photomorphogenesis, GO:0009958 - positive gravitropism, GO:0051302 - regulation of cell division, GO:0009629 - response to gravity, GO:0010184 - cytokinin transport, GO:0009832 - plant-type cell wall biogenesis, GO:0005634 - nucleus, GO:0009639 - response to red or far red light, GO:0032922 - circadian regulation of gene expression, GO:0009664 - plant-type cell wall organization","TO:0000590 - grain weight, TO:0000557 - secondary branch number, TO:0000163 - auxin sensitivity, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000567 - tiller angle",null,"Os01g0286100"]
[{"$nulls":23},"Os03g0792500","Os06g0573600","Os02g0158800","Os02g0158800",1.2454327,1.3208412,null,"Os12g0637400",4.0440764,"Os09g0550500",-1.4175048,{"$nulls":29},"S40-10","OsS40-10","S40 PROTEIN 10","S40 protein 10",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence","TO:0000011 - nitrogen sensitivity, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os01g0727600/Os01g0727700  ","LOC_Os01g52740.1",{"$nulls":7},"SPW1","SPW1, spw1, MADS16, OsMADS16","SUPERWOMAN 1","SUPERWOMAN1/OsMADS16, SUPERWOMAN1, superwoman-1, MADS-box transcription factor 16, Protein SUPERWOMAN1, Protein APETALA3-like",6," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0009908 - flower development, GO:0030154 - cell differentiation, GO:0005739 - mitochondrion, GO:0048455 - stamen formation, GO:0009555 - pollen development, GO:0048437 - floral organ development, GO:0043565 - sequence-specific DNA binding","TO:0006022 - floral organ development trait, TO:0000622 - flower development trait","PO:0025585 - floral organ formation stage , PO:0007615 - flower development stage ","Os06g0712700","LOC_Os06g49840.2, LOC_Os06g49840.1",{"$nulls":6},"qPGWC-12","qPGWC-12","white core grain percentage (QTL)-12","white core grain percentage (QTL)-12",null," Seed - Physiological traits - Taste",{"$nulls":11},"ZIP6","OsZIP6","ZINC TRANSPORTER 6","zinc transporter 6, Zrt-Irt-like protein 6, Zinc-regulated transporter 6",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0042742 - defense response to bacterium, GO:0046873 - metal ion transmembrane transporter activity, GO:0046686 - response to cadmium ion, GO:0005385 - zinc ion transmembrane transporter activity, GO:0006829 - zinc ion transport, GO:0016020 - membrane","TO:0000175 - bacterial blight disease resistance",null,"Os05g0164800","LOC_Os05g07210.1","Os04g0683700","Os06g0700700","Os05g0518800",4.01957,0,null,"RSUS5","SUS5, SS5, OsScS5, RSs5, RSus5, OsSUS5","SUCROSE SYNTHASE 5","Rice sucrose synthase-5, Sucrose synthase 5, Sucrose-UDP glucosyltransferase 5, Sucrose synthase-5, rice SuSy gene 5",4," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005985 - sucrose metabolic process, GO:0016020 - membrane, GO:0051781 - positive regulation of cell division, GO:0009058 - biosynthetic process, GO:0016157 - sucrose synthase activity, GO:0005737 - cytoplasm","TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000396 - grain yield, TO:0000696 - starch content, TO:0000590 - grain weight",null,"Os04g0309600","LOC_Os04g24430.1"]
[{"$nulls":23},"Os03g0808100","Os07g0510500","Os03g0250200","Os03g0250200",4.325434,3.818896,null,"Os02g0234700",4.0404224,"Os01g0743800",-1.4168855,{"$nulls":29},"S40-12","OsS40-12","S40 PROTEIN 12","S40 protein 12",11," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0009646 - response to absence of light, GO:0009507 - chloroplast, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0050832 - defense response to fungus","TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000011 - nitrogen sensitivity, TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000466 - carbon content","PO:0025034 - leaf , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage ","Os11g0154300","LOC_Os11g05600.1",{"$nulls":7},"DL","DL, dl(lop), lop, dl, dl1","DROOPING LEAF","drooping leaf, drooping leaf-1, DL protein, Protein DROOPING LEAF, Protein CRABS CLAW homolog, Protein CRC homolog",3," Vegetative organ - Leaf,  Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048440 - carpel development, GO:0030154 - cell differentiation, GO:0008270 - zinc ion binding, GO:0048366 - leaf development, GO:0010022 - meristem determinacy, GO:0010073 - meristem maintenance, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0006017 - meristem identity, TO:0000206 - leaf angle, TO:0000499 - flower anatomy and morphology trait, TO:0000124 - flag leaf angle, TO:0000472 - vascular bundle number, TO:0002718 - awn anatomy and morphology trait, TO:0000655 - leaf development trait","PO:0000019 - gynoecium primordium , PO:0000229 - flower meristem , PO:0009082 - spikelet floret , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009037 - lemma , PO:0009009 - plant embryo , PO:0009025 - vascular leaf ","Os03g0215200","LOC_Os03g11600.2, LOC_Os03g11600.1",{"$nulls":6},"qSWC-3","qSWC-3","square of white core (QTL)-3","square of white core (QTL)-3",null," Seed - Physiological traits - Taste",{"$nulls":11},"ZIP7","OsZIP7","ZINC TRANSPORTER 7","zinc transporter 7, Zrt-Irt-like protein 7, Zinc-regulated transporter 7",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0016021 - integral to membrane, GO:0006829 - zinc ion transport, GO:0005385 - zinc ion transmembrane transporter activity, GO:0005886 - plasma membrane","TO:0000351 - zinc sensitivity",null,"Os05g0198400","LOC_Os05g10940.1","Os05g0194900","Os04g0610800","Os11g0112000",4.0155787,0,null,"RSUS6","SUS6, SS6, OsScS6, RSs6, RSus6, OsSUS6","SUCROSE SYNTHASE 6","Rice sucrose synthase-6, Sucrose synthase 6, Sucrose-UDP glucosyltransferase 6, Sucrose synthase-6, rice SuSy gene 6",2," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009058 - biosynthetic process, GO:0051781 - positive regulation of cell division, GO:0005985 - sucrose metabolic process, GO:0016157 - sucrose synthase activity","TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000449 - grain yield per plant, TO:0000696 - starch content",null,"Os02g0831500","LOC_Os02g58480.1"]
[{"$nulls":23},"Os03g0828500","Os02g0578400","Os02g0280700","Os02g0280700",2.494077,3.7561703,null,"Os02g0268600",4.0400224,"Os05g0476700",-1.4166422,{"$nulls":29},"S40-13","OsS40-13","S40 PROTEIN 13","S40 protein 13",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0009507 - chloroplast, GO:0050832 - defense response to fungus, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000346 - tiller number, TO:0000590 - grain weight, TO:0000466 - carbon content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000207 - plant height","PO:0025034 - leaf , PO:0009010 - seed , PO:0009005 - root , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0020148 - shoot apical meristem ","Os04g0520700","LOC_Os04g43990.1",{"$nulls":7},"AN7","An7(t), An7(t)*","AWN 7","Awn 7(t), Awn-7",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"qPKV-2","qPKV-2","peak viscosity (QTL)-2","peak viscosity (QTL)-2",null," Seed - Physiological traits - Taste",{"$nulls":11},"CKX4","OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2","CYTOKININ OXIDASE/DEHYDROGENASE 4","Putative cytokinin dehydrogenase 4, cytokinin oxidase 4",1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0051607 - defense response to virus, GO:0050660 - FAD binding, GO:0032940 - secretion by cell, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0019139 - cytokinin dehydrogenase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0022900 - electron transport chain, GO:0009690 - cytokinin metabolic process, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0005615 - extracellular space, GO:0016491 - oxidoreductase activity, GO:0009725 - response to hormone stimulus","TO:0000163 - auxin sensitivity, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000011 - nitrogen sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000167 - cytokinin sensitivity",null,"Os01g0940000","LOC_Os01g71310.1","Os06g0125500","Os03g0780800","Os05g0206000",4.002067,0,null,"SPDS2","OsSPDS2, OsSPMS1, SPMS1","SPERMIDINE SYNTHASE 2","spermidine synthase 2, spermine synthase 1, spermidine/spermine synthase 1",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0016740 - transferase activity, GO:0048831 - regulation of shoot development, GO:0009692 - ethylene metabolic process, GO:0048364 - root development, GO:0006596 - polyamine biosynthetic process, GO:0004766 - spermidine synthase activity, GO:0010187 - negative regulation of seed germination, GO:0016049 - cell growth, GO:0009873 - ethylene mediated signaling pathway, GO:0008152 - metabolic process, GO:0009693 - ethylene biosynthetic process, GO:0009651 - response to salt stress","TO:0000449 - grain yield per plant, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000339 - stem thickness, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000430 - germination rate, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009047 - stem , PO:0020141 - stem node , PO:0000025 - root tip ","Os06g0528600","LOC_Os06g33710.1, LOC_Os06g33710.2, LOC_Os06g33710.3, LOC_Os06g33710.4"]
[{"$nulls":23},"Os04g0234600","Os08g0489300","Os01g0352100","Os01g0352100",2.6828668,3.340451,null,"Os01g0336300",4.036772,"Os03g0237500",-1.4166337,{"$nulls":29},"S40-14","OsS40-14","S40 PROTEIN 14","S40 protein 14",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0010233 - phloem transport, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009733 - response to auxin stimulus, GO:0009646 - response to absence of light","TO:0000249 - leaf senescence, TO:0000466 - carbon content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0000276 - drought tolerance","PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0009010 - seed ","Os05g0531000","LOC_Os05g45440.1",{"$nulls":7},"AN8","An8(t), An8(t)*, An8","AWN 8","Awn8(t), Awn-8",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"qPKV-12","qPKV-12","peak viscosity (QTL)-12","peak viscosity (QTL)-12",null," Seed - Physiological traits - Taste",{"$nulls":11},"OSC6","Osc6, Osg6B, OsG6B, OsLTPG25, OsLTPg25, OsLtpVII.1, Os C6, C6","ANTHER SPECIFIC PROTEIN 6","GPI-anchored non-specific lipid transfer protein 25, type G nsLTP 25, type G non-specific lipid transfer protein 25",11," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008233 - peptidase activity, GO:0010584 - pollen exine formation, GO:0006869 - lipid transport, GO:0009555 - pollen development","TO:0000432 - temperature response trait","PO:0009066 - anther ","Os11g0582500","LOC_Os11g37280.1","Os01g0124401","Os09g0127300","Os02g0285300",4.0003457,0,null,"FUCTA","OsFUT11, FUT11, FucTA, OsFucTA, OsFucT, FucT, \\alpha1, 3-FucT\\\"\"","CORE ALPHA-1,3-FUCOSYLTRANSFERASE","core alpha-1, 3-fucosyltransferase, alpha1, 3-Fucosyltransferase, Glycoprotein 3-alpha-L-fucosyltransferase A",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018392 - glycoprotein 3-alpha-L-fucosyltransferase activity, GO:0008417 - fucosyltransferase activity, GO:0006486 - protein amino acid glycosylation, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009908 - flower development, GO:0032580 - Golgi cisterna membrane, GO:0009555 - pollen development, GO:0048653 - anther development","TO:0000576 - stem length, TO:0000391 - seed size, TO:0000214 - anther shape, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000531 - anther length, TO:0000207 - plant height, TO:0002610 - pistil length, TO:0000145 - internode length, TO:0000622 - flower development trait, TO:0000429 - salt sensitivity, TO:0000448 - filled grain percentage","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0007615 - flower development stage ","Os08g0472600","LOC_Os08g36840.1"]
[{"$nulls":23},"Os04g0249500","Os04g0223300","Os03g0439500","Os03g0439500",7.52218,1.6984366,null,"Os01g0303600",4.029588,"Os11g0705200",-1.414639,{"$nulls":29},"S40-15","OsS40-15","S40 PROTEIN 15","S40 protein 15",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress","TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0009010 - seed , PO:0025034 - leaf , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence ","Os07g0516300","LOC_Os07g33270.1",{"$nulls":7},"EG2","eg2(t), eg2","EXTRA GLUME 2","extra glume-2",null," Reproductive organ - Spikelet, flower, glume, awn","GO:0030154 - cell differentiation","TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009082 - spikelet floret , PO:0009039 - glume ",{"$nulls":8},"qHPV-6-1","qHPV-6-1","hot paste viscosity (QTL)-6-1","hot paste viscosity (QTL)-6-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR1","OsAsr1, OsASR3, ASR3, Asr3","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 1 PROTEIN","Abiotic Stress Responsive 3, \\ABA-, stress and ripening-induced protein 3\\\", \\\"abscisic acid-, stress- and ripening (ASR) gene 3\\\"\"",2," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance",null,"Os02g0543000","LOC_Os02g33820.1","Os09g0537700","Os07g0628500","Os01g0127200",3.924364,0,null,"_","OsSNAP32, SNAP32","_","Synaptosomal-associated protein 32, Synaptosome-associated protein of 32 kD",2," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000180 - spikelet fertility, TO:0000269 - 100-seed weight, TO:0000040 - panicle length, TO:0000207 - plant height","PO:0025034 - leaf ","Os02g0437200","LOC_Os02g24080.5, LOC_Os02g24080.4, LOC_Os02g24080.3, LOC_Os02g24080.2, LOC_Os02g24080.1"]
[{"$nulls":23},"Os04g0382300","Os05g0375400","Os09g0248900","Os09g0248900",7.9145284,6.0013676,null,"Os01g0729600",4.027969,"Os12g0299300",-1.4143931,{"$nulls":29},"S40-16","OsS40-16","S40 PROTEIN 16","S40 protein 16",7," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0006001 - salt tolerance","PO:0001054 - 4 leaf senescence stage , PO:0009010 - seed ","Os07g0512250","LOC_Os07g32810.1",{"$nulls":7},"AN9","An9, An9(t)*","AWN 9","Awn9, Awn-9",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"qHPV-6-2","qHPV-6-2","hot paste viscosity (QTL)-6-2","hot paste viscosity (QTL)-6-2",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR2","OsAsr2, OsASR4, OsASR6","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 2 PROTEIN","Abiotic Stress Responsive 4, \\ABA-, stress and ripening-induced protein 6\\\"\"",1," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0006950 - response to stress","TO:0000276 - drought tolerance",null,"Os01g0963600","LOC_Os01g73250.1, LOC_Os01g73250.2","Os09g0538000","Os02g0753000","Os01g0822900",3.8798516,0,null,"GRY340","OsCMK, CMK, OsIspE, IspE, OsGRY340","GREEN-REVERTIBLE YELLOW LEAF 340","4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, CDP-ME kinase, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, green-revertible yellow leaf 340",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0007005 - mitochondrion organization, GO:0009416 - response to light stimulus, GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity, GO:0009411 - response to UV, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0016114 - terpenoid biosynthetic process, GO:0009570 - chloroplast stroma, GO:0005524 - ATP binding, GO:0009658 - chloroplast organization","TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000496 - carotenoid content, TO:0000160 - UV light sensitivity, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000456 - spikelet number, TO:0000455 - seed set percent, TO:0000075 - light sensitivity, TO:0002715 - chloroplast development trait, TO:0000137 - days to heading, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content, TO:0000326 - leaf color","PO:0000003 - whole plant ","Os01g0802100","LOC_Os01g58790.2, LOC_Os01g58790.1"]
[{"$nulls":23},"Os04g0459500","Os09g0439500","Os10g0450000","Os10g0450000",7.397053,4.2582054,null,"Os11g0439600",4.0240235,"Os02g0558700",-1.4129696,{"$nulls":29},"SPL-HM143","OsHCAR, HCAR","SPOTTED LEAF-HM143","7-hydroxymethyl Chl a reductase, 7-hydroxymethyl chlorophyll a reductase",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043067 - regulation of programmed cell death, GO:0042742 - defense response to bacterium, GO:0015996 - chlorophyll catabolic process, GO:0009635 - response to herbicide, GO:0009507 - chloroplast, GO:0000302 - response to reactive oxygen species, GO:0070265 - necrotic cell death, GO:0033354 - chlorophyll cycle, GO:0046872 - metal ion binding, GO:0010150 - leaf senescence, GO:0009642 - response to light intensity, GO:0051536 - iron-sulfur cluster binding","TO:0000495 - chlorophyll content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000063 - mimic response, TO:0000326 - leaf color, TO:0000058 - herbicide sensitivity, TO:0002657 - oxidative stress, TO:0000460 - light intensity sensitivity, TO:0000652 - leaf necrosis, TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0000003 - whole plant , PO:0009005 - root , PO:0009047 - stem , PO:0020142 - stem internode , PO:0020141 - stem node , PO:0020104 - leaf sheath , PO:0009010 - seed ","Os04g0320100","LOC_Os04g25400.2",{"$nulls":7},"AN10","An10, An10*","AWN 10","Awn10, Awn-10",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"qCPV-6-1","qCPV-6-1","cold paste viscosity (QTL)-6-1","cold paste viscosity (QTL)-6-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR3","Asr3, OsASR5, OsASR1, Asr1","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 3 PROTEIN","Abiotic Stress Responsive 5, \\ABA-, stress and ripening-induced protein 1\\\"\"",1," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0010038 - response to metal ion, GO:0046689 - response to mercury ion, GO:0010288 - response to lead ion, GO:0006950 - response to stress","TO:0000034 - chromium sensitivity",null,"Os01g0959100","LOC_Os01g72900.1","Os05g0472400","Os08g0137400","Os05g0524400",3.8647003,0,null,"EAS1 ","OsPAO, PAO, OsACD1, ACD1, OsEAS1, RCD2, OsRCD2","EARLY SENESCENCE 1 ","Pheophorbide a oxygenase, accelerated cell-death 1, early senescence 1, rapid cell death 2",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0008219 - cell death, GO:0045730 - respiratory burst, GO:0009507 - chloroplast, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009416 - response to light stimulus, GO:0009611 - response to wounding, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046872 - metal ion binding, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000346 - tiller number, TO:0000316 - photosynthetic ability, TO:0000605 - hydrogen peroxide content, TO:0000326 - leaf color, TO:0000075 - light sensitivity, TO:0000325 - soluble protein content, TO:0000495 - chlorophyll content, TO:0000455 - seed set percent, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0001018 - transpiration rate, TO:0000522 - stomatal conductance, TO:0000145 - internode length, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os03g0146400","LOC_Os03g05310.1"]
[{"$nulls":23},"Os04g0474500","Os03g0359600","Os09g0304500","Os09g0304500",3.858783,2.1891744,null,"Os03g0775700",4.023272,"Os09g0511700",-1.4125928,{"$nulls":29},"PLS2","RBP-59, OsPLS2, HeFP, OsHeFP","PREMATURE LEAF SENESCENCE 2","RNA-binding RBP-59, premature leaf senescence 2, helicase family protein",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Endosperm","GO:0010218 - response to far red light, GO:0046466 - membrane lipid catabolic process, GO:0003677 - DNA binding, GO:0004386 - helicase activity, GO:0005524 - ATP binding, GO:0009960 - endosperm development, GO:0051783 - regulation of nuclear division, GO:0010342 - cellularization of endosperm, GO:0031116 - positive regulation of microtubule polymerization, GO:0043014 - alpha-tubulin binding, GO:0048487 - beta-tubulin binding, GO:0007010 - cytoskeleton organization, GO:0003779 - actin binding, GO:0030276 - clathrin binding, GO:0042542 - response to hydrogen peroxide, GO:0009737 - response to abscisic acid stimulus, GO:0009416 - response to light stimulus, GO:0010150 - leaf senescence","TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000326 - leaf color, TO:0000615 - abscisic acid sensitivity, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0002667 - abscisic acid content, TO:0000455 - seed set percent, TO:0000249 - leaf senescence, TO:0000130 - far red light sensitivity, TO:0000063 - mimic response, TO:0000075 - light sensitivity","PO:0007633 - endosperm development stage , PO:0001054 - 4 leaf senescence stage ","Os03g0586900","LOC_Os03g38990.1",{"$nulls":7},"AN6","An6, An6(t), An6*","AWN 6","Awn6",8," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development","TO:0000072 - awn length","PO:0006032 - lemma awn ",{"$nulls":8},"qCPV-6-2","qCPV-6-2","cold paste viscosity (QTL)-6-2","cold paste viscosity (QTL)-6-2",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR4","Asr4, OsASR6, OsASR2, Asr2","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 4 PROTEIN","Abiotic Stress Responsive 6, \\ABA-, stress and ripening-induced protein 2\\\"\"",1," Tolerance and resistance - Stress tolerance","GO:0010188 - response to microbial phytotoxin, GO:0009635 - response to herbicide, GO:0009651 - response to salt stress, GO:0006950 - response to stress","TO:0006001 - salt tolerance, TO:0000058 - herbicide sensitivity",null,"Os01g0959200","LOC_Os01g72910.1","Os08g0101600","Os01g0348900","Os01g0303800",3.7975938,0,null,"CTR2","OsCTR2","CONSTITUTIVE TRIPLE-RESPONSE 2","CONSTITUTIVE TRIPLE-RESPONSE2",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009873 - ethylene mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000173 - ethylene sensitivity, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os02g0527600 ","LOC_Os02g32610.2, LOC_Os02g32610.3, LOC_Os02g32610.4"]
[{"$nulls":23},"Os04g0477500","Os07g0287400","Os07g0513200","Os07g0513200",-3.3484707,-1.8564715,null,"Os05g0518800",4.01957,"Os05g0100600",-1.4096457,{"$nulls":29},"ALDH2B1  ","OsALDH2B1, OsALDH2b, ALDH2b","ALDEHYDE DEHYDROGENASE 2B1","Aldehyde dehydrogenase 2B1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005739 - mitochondrion, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009742 - brassinosteroid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0016491 - oxidoreductase activity, GO:0004029 - aldehyde dehydrogenase (NAD) activity, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0009556 - microsporogenesis, GO:0048653 - anther development, GO:0051321 - meiotic cell cycle, GO:0048608 - reproductive structure development, GO:0009555 - pollen development","TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002668 - jasmonic acid content, TO:0000476 - growth hormone content, TO:0000040 - panicle length, TO:0002688 - leaf lamina joint bending, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000437 - male sterility, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os06g0270900","LOC_Os06g15990.1",{"$nulls":7},"AN6-MER","An6-mer","AWN 6-MER","Awn 6-mer",8," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development",{"$nulls":10},"qCPV-1","qCPV-1","cold paste viscosity (QTL)-1","cold paste viscosity (QTL)-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR5","OsASR5, Asr5, Asr1, OsASR1, OsASR2, ASR2","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 5 PROTEIN","Abiotic Stress Responsive 1, \\ABA-, stress and ripening-induced protein 5\\\", \\\"abscisic acid-, stress- and ripening (ASR) gene 5\\\", \\\"abscisic acid, stress and ripening 2\\\"\"",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010044 - response to aluminum ion, GO:0006950 - response to stress, GO:0009723 - response to ethylene stimulus, GO:0042742 - defense response to bacterium, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0010119 - regulation of stomatal movement, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000522 - stomatal conductance, TO:0000255 - sheath blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000354 - aluminum sensitivity, TO:0006001 - salt tolerance, TO:0000173 - ethylene sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002667 - abscisic acid content, TO:0000303 - cold tolerance",null,"Os11g0167800","LOC_Os11g06720.1","Os01g0326300","Os12g0115700","Os01g0125600",3.741105,0,null,"PUP1","OsPUP1","PURINE PERMEASE 1","purine permease 1, PUP-type cytokinin transporter 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0010184 - cytokinin transport, GO:0015211 - purine nucleoside transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum","TO:0000040 - panicle length, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000346 - tiller number, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002689 - leaf sheath length, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000590 - grain weight","PO:0001083 - inflorescence development stage , PO:0005417 - phloem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0000034 - vascular system , PO:0009005 - root ","Os03g0187800","LOC_Os03g08880.1"]
[{"$nulls":23},"Os04g0513900","Os01g0978100","Os10g0378100","Os10g0378100",2.3915017,2.1656606,null,"Os11g0112000",4.0155787,"Os05g0520600",-1.4091277,{"$nulls":29},"NTMC2T4.1","OsNTMC2T4.1, OsSYT-5, SYT-5, SYT5","N-TERMINAL-TM-C2 DOMAIN PROTEIN 4.1","N-terminal-TM-C2 domain protein 4.1, N-terminal trans- membrane and C2 domain protein 4.1, NTMC2 type 4.1 protein, NTMC2 family gene 4.1, silencing of the synaptotagmin-5",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0006950 - response to stress, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005513 - detection of calcium ion, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008289 - lipid binding, GO:0005783 - endoplasmic reticulum","TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000043 - root anatomy and morphology trait, TO:0002637 - leaf size, TO:0000566 - stomatal frequency, TO:0000540 - leaf area, TO:0000152 - panicle number, TO:0000396 - grain yield, TO:0001018 - transpiration rate, TO:0000136 - relative water content, TO:0000084 - root number, TO:0000227 - root length, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000421 - pollen fertility, TO:0002667 - abscisic acid content, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate, TO:0001017 - water use efficiency, TO:0000276 - drought tolerance, TO:0000181 - seed weight, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000040 - panicle length",null,"Os07g0409100","LOC_Os07g22640.4, LOC_Os07g22640.1, LOC_Os07g22640.2, LOC_Os07g22640.3",{"$nulls":7},"AN7-GLUM","An7-glum","AWN7-GLUM","Awn7-glum",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development",{"$nulls":10},"qBDV-7","qBDV-7","breakdown viscosity (QTL)-7","breakdown viscosity (QTL)-7",null," Seed - Physiological traits - Taste",{"$nulls":11},"ASR6","Asr6","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 6 PROTEIN",null,4," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress",null,null,"Os04g0423700","LOC_Os04g34620.1","Os05g0139100","Os09g0365900","Os05g0586400",3.7398136,0,null,"PUP4","OsPUP4, BG3/OsPUP4, BG3, OsBG3","PURINE PERMEASE 4","purine permease 4, PUP-type cytokinin transporter 4, Big Grain3",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0009690 - cytokinin metabolic process, GO:0010184 - cytokinin transport, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0048366 - leaf development, GO:0009737 - response to abscisic acid stimulus","TO:0000567 - tiller angle, TO:0000137 - days to heading, TO:0002759 - grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000655 - leaf development trait, TO:0000397 - grain size, TO:0000557 - secondary branch number, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0002689 - leaf sheath length, TO:0000734 - grain length, TO:0000399 - grain thickness, TO:0000615 - abscisic acid sensitivity","PO:0009015 - portion of vascular tissue ","Os01g0680200","LOC_Os01g48800.1"]
[{"$nulls":23},"Os04g0551200","Os07g0157600","Os09g0264400","Os09g0264400",5.26255,4.044229,null,"Os03g0368900",4.013238,"Os12g0233800",-1.4053911,{"$nulls":29},"YGL8",null,"YELLOW-GREEN LEAF 8","yellow green leaf 8",1," Biochemical character,  Vegetative organ - Leaf","GO:0033862 - UMP kinase activity, GO:0005737 - cytoplasm, GO:0009658 - chloroplast organization, GO:0006221 - pyrimidine nucleotide biosynthetic process","TO:0000522 - stomatal conductance, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0001015 - photosynthetic rate, TO:0001018 - transpiration rate","PO:0025034 - leaf ","Os01g0965400","LOC_Os01g73450.1",{"$nulls":7},"AN8-GLUM","An8-glum","AWN8-GLUM","Awn8-glum",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0007275 - multicellular organismal development",{"$nulls":10},"qBDV-1","qBDV-1","breakdown viscosity (QTL)-1","breakdown viscosity (QTL)-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"ATP6","atp6, OsPOX1, prx3, POX1","ATPASE SUBUNIT 6","peroxidase 1, class III peroxidase 3",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016887 - ATPase activity, GO:0051707 - response to other organism, GO:0004601 - peroxidase activity, GO:0005618 - cell wall, GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0046872 - metal ion binding","TO:0000605 - hydrogen peroxide content",null,"Os01g0263300","LOC_Os01g15830.1","Os09g0482100","Os03g0340500","Os03g0633800",3.7268476,0,null,"PUP7","OsPUP7","PURINE PERMEASE 7","purine permease 7, PUP-type cytokinin transporter 7",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0010184 - cytokinin transport, GO:0005783 - endoplasmic reticulum, GO:0051302 - regulation of cell division","TO:0006001 - salt tolerance, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000567 - tiller angle, TO:0000397 - grain size","PO:0009015 - portion of vascular tissue ","Os05g0556800","LOC_Os05g48300.1"]
[{"$nulls":23},"Os04g0568600","Os02g0831500","Os02g0173100","Os02g0173100",2.5094662,1.1731826,null,"Os09g0441000",4.012857,"Os02g0784700",-1.4037241,{"$nulls":29},"YGL138","YGL138(t), SRP54, OsSRP54, OscpSRP54a, cpSRP54a, PGL14","YELLOW-GREEN LEAF 138","yellow green leaf 138, signal recognition particle 54 kDa, chloroplast signal recognition particle 54a, pale green leaf 14",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0008312 - 7S RNA binding, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0005525 - GTP binding, GO:0006614 - SRP-dependent cotranslational protein targeting to membrane, GO:0048500 - signal recognition particle, GO:0003924 - GTPase activity","TO:0000326 - leaf color, TO:0000456 - spikelet number, TO:0000346 - tiller number, TO:0000298 - chlorophyll ratio, TO:0000495 - chlorophyll content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000180 - spikelet fertility, TO:0000496 - carotenoid content","PO:0009006 - shoot system , PO:0025034 - leaf ","Os11g0153600","LOC_Os11g05552.1",{"$nulls":7},"OSH1","OSKN1, Oskn1, OsKN1, OSH1/Oskn1, HB75","HOMEOBOX 1","Oryza sativa homeobox1, Homeobox protein OSH1, Homeobox protein knotted-1-like 6, Homeobox protein knotted-1-like 1, Rice KNOX gene-1, KNOX PROTEIN 1, KNOX protein 1, KNOX protein 1, HOMEOBOX 1, HOMEOBOX PROTEIN OSH1",3," Vegetative organ - Shoot apical meristem(SAM),  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048653 - anther development, GO:0006350 - transcription, GO:0009742 - brassinosteroid mediated signaling, GO:0009901 - anther dehiscence, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0016132 - brassinosteroid biosynthetic process","TO:0000432 - temperature response trait, TO:0000492 - leaf shape, TO:0002689 - leaf sheath length, TO:0002672 - auxin content, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending","PO:0009025 - vascular leaf , PO:0001004 - anther development stage ","Os03g0727000","LOC_Os03g51690.3, LOC_Os03g51690.2, LOC_Os03g51690.1",{"$nulls":6},"qBDV-5","qBDV-5","breakdown viscosity (QTL)-5","breakdown viscosity (QTL)-5",null," Seed - Physiological traits - Taste",{"$nulls":11},"OSBZ8","OsBZ8, OsbZIP05, OsGBF1, GBF1, OsGBF1a, OsGBF1b","BZIP PROTEIN 8","bZIP transcription factor 05, G-box-binding factor 1",1," Tolerance and resistance - Stress tolerance,  Other","GO:0046983 - protein dimerization activity, GO:0003700 - transcription factor activity, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0006001 - salt tolerance",null,"Os01g0658900","LOC_Os01g46970.2, LOC_Os01g46970.1","Os02g0519900","Os06g0159600","Os03g0236200",3.6825602,0,null,"AN1","An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1","AWN1","Awn-1, basic helix-loop-helix protein 093, Regulatory of awn elongation 1, REGULATOR OF AWN ELONGATION 1, Regulator of Awn Elongation 1, Awn4-2",4," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other",null,"TO:0000072 - awn length, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0002734 - awn presence","PO:0025349 - awn ","Os04g0350700","LOC_Os04g28280.1"]
[{"$nulls":23},"Os04g0604900","Os11g0169200","Os05g0424300","Os05g0424300",-2.9878438,-1.4884156,null,"Os10g0390800",4.012246,"Os08g0521000",-1.4030415,{"$nulls":29},"CV","OsCV","CHLOROPLAST VESICULATION",null,5," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0080093 - regulation of photorespiration, GO:0009414 - response to water deprivation",null,null,"Os05g0575000","LOC_Os05g49940.1",{"$nulls":7},"GAMYB","OsGAMYB, GAM1, OsGAMyb, Os-MYBGA, Os GAMYB, OsMYBGA, MYBGA","GIBBERELLIN MYB GENE","homologue to the barley Myb-like transcription factor, Transcription factor GAMYB, Gibberellin myb gene",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0042742 - defense response to bacterium, GO:0007126 - meiosis, GO:0009845 - seed germination, GO:0080006 - internode patterning, GO:0005737 - cytoplasm, GO:0045449 - regulation of transcription, GO:0003682 - chromatin binding, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0030154 - cell differentiation, GO:0003677 - DNA binding, GO:0009908 - flower development, GO:0006350 - transcription, GO:0048653 - anther development, GO:0009740 - gibberellic acid mediated signaling","TO:0000187 - anther color, TO:0000492 - leaf shape, TO:0000175 - bacterial blight disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000430 - germination rate, TO:0000437 - male sterility, TO:0000531 - anther length, TO:0000401 - plant growth hormone sensitivity, TO:0000145 - internode length","PO:0009025 - vascular leaf , PO:0000003 - whole plant , PO:0007057 - 0 seed germination stage ","Os01g0812000","LOC_Os01g59660.3, LOC_Os01g59660.1, LOC_Os01g59660.2, LOC_Os01g59660.4",{"$nulls":6},"qBDV-6","qBDV-6","breakdwon viscosity (QTL)-6","breakdwon viscosity (QTL)-6",null," Seed - Physiological traits - Taste",{"$nulls":11},"RAB16B","rab21, OsLEA28, OsRAB16D, OsRAB16b, XERO1, OsXERO1","RESPONSIVE TO ABA GENE 16B","Dehydrin Rab16B, RAB(RESPONSIVE TO ABA) GENE 16B, late embryogenesis abundant protein 28",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009415 - response to water, GO:0006950 - response to stress","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000237 - water stress trait, TO:0000276 - drought tolerance",null,"Os11g0454200","LOC_Os11g26780.1","Os01g0654500","Os09g0455300","Os01g0702700",3.6745605,0,null,"_","OsFBK12, OsFbox130, Os_F0642","_","F-Box Protein 12, F-box protein 130, F-box protein containing kelch motif 12",3," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination",null,"TO:0000249 - leaf senescence, TO:0002661 - seed maturation, TO:0000476 - growth hormone content, TO:0002759 - grain number, TO:0000391 - seed size, TO:0000590 - grain weight",null,"Os03g0171600","LOC_Os03g07530.1, LOC_Os03g07530.2, LOC_Os03g07530.3"]
[{"$nulls":23},"Os04g0631200","Os05g0556400","Os10g0378000","Os10g0378000",2.4803755,1.8747015,null,"Os01g0600900",4.0118365,"Os01g0952900",-1.4009453,{"$nulls":29},"WLP2","OsWLP2, OsFLN1, FLN1, HSA2","WHITE LEAF AND PANICLE 2","White Leaf and Panicle 2, fructokinase-like 1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0045454 - cell redox homeostasis, GO:0016301 - kinase activity, GO:0043621 - protein self-association, GO:0009658 - chloroplast organization, GO:0042793 - transcription from plastid promoter, GO:0042644 - chloroplast nucleoid, GO:0005634 - nucleus, GO:0009408 - response to heat","TO:0000316 - photosynthetic ability, TO:0000259 - heat tolerance, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000201 - panicle color",null,"Os01g0851000","LOC_Os01g63220.3, LOC_Os01g63220.2, LOC_Os01g63220.1",{"$nulls":7},"MADS2","OsMADS2, RMADS219, NMADS1, PI2, nmads1, DLN33, OsDLN33","MADS BOX GENE 2","MADS box gene2, MADS-box transcription factor 2, GLOBOSA(GLO)-like MADS-box gene-2, DLN repressor 33, DLN motif protein 33",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009908 - flower development, GO:0003700 - transcription factor activity","TO:0000499 - flower anatomy and morphology trait, TO:0000580 - cytoplasmic male sterility, TO:0000622 - flower development trait","PO:0009046 - flower , PO:0007615 - flower development stage ","Os01g0883100","LOC_Os01g66030.2, LOC_Os01g66030.1",{"$nulls":6},"qBDV-12","qBDV-12","breakdown viscosity (QTL)-12","breakdown viscosity (QTL)-12",null," Seed - Physiological traits - Taste",{"$nulls":11},"RAB16C","rab21, OsLEA27, rab16C, OsRAB16C, DHD","RESPONSIVE TO ABA GENE 16C","RAB(RESPONSIVE TO ABA) GENE 16C, Dehydrin Rab16C, late embryogenesis abundant protein 27",11," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009415 - response to water, GO:0042542 - response to hydrogen peroxide, GO:0006950 - response to stress, GO:0009651 - response to salt stress","TO:0000615 - abscisic acid sensitivity, TO:0000507 - osmotic adjustment capacity, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os11g0454000","LOC_Os11g26760.1","Os01g0962700","Os02g0618400","Os03g0411300",3.6715295,0,null,"GW5","qSW5/GW5, GSE55, OsGW5, qSW5","GRAIN WIDTH 5","GRAIN SIZE ON CHROMOSOME 5, seed width (QTL)-5",5," Seed - Morphological traits - Grain shape,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0019722 - calcium-mediated signaling, GO:0048316 - seed development, GO:0042127 - regulation of cell proliferation, GO:0005886 - plasma membrane","TO:0000402 - grain width, TO:0000621 - inflorescence development trait, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000653 - seed development trait","PO:0009049 - inflorescence , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os05g0187500","LOC_Os05g09520.1"]
[{"$nulls":23},"Os04g0640700","Os02g0691500","Os05g0101600","Os05g0101600",1.6859398,1.2058522,null,"Os07g0685500",4.0062137,"Os01g0528300",-1.4003545,{"$nulls":29},"OBGC1","OsObgC1, ObgC1","OBG PROTEIN C1","Spo0B-associated GTP-binding protein C1, Obg protein C1",7," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009658 - chloroplast organization, GO:0003924 - GTPase activity, GO:0005525 - GTP binding, GO:0042254 - ribosome biogenesis, GO:0009507 - chloroplast, GO:0000287 - magnesium ion binding","TO:0000326 - leaf color",null,"Os07g0669200","LOC_Os07g47300.1",{"$nulls":7},"MADS5","OsMADS5, FDRMADS2","MADS BOX GENE 5","MADS box gene5, MADS-box transcription factor 5",6," Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0030154 - cell differentiation, GO:0043565 - sequence-specific DNA binding","TO:0002616 - flowering time, TO:0000245 - pollen free, TO:0000373 - inflorescence anatomy and morphology trait","PO:0001047 - lemma development stage , PO:0001049 - lodicule development stage , PO:0001048 - palea development stage ","Os06g0162800","LOC_Os06g06750.1",{"$nulls":6},"qCSV-1","qCSV-1","consistency viscosity (QTL)-1","consistency viscosity (QTL)-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"RAB16D","rab21, OsLEA26, Rab16D, OsRab16","RESPONSIVE TO ABA GENE 16D","RAB(RESPONSIVE TO ABA) GENE 16D, Dehydrin Rab16D, late embryogenesis abundant protein 26",11," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0009651 - response to salt stress, GO:0009415 - response to water, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0019722 - calcium-mediated signaling","TO:0000303 - cold tolerance, TO:0000237 - water stress trait, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os11g0453900","LOC_Os11g26750.1","Os06g0522300","Os02g0676500","Os08g0512700",3.650962,0,null,"HGW","OsHGW","HEADING AND GRAIN WEIGHT","heading and grain weight, heading date- and grain weight-related protein",6," Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0050832 - defense response to fungus","TO:0000137 - days to heading, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000129 - false smut disease resistance",null,"Os06g0160400","LOC_Os06g06530.1"]
[{"$nulls":23},"Os04g0682300","Os05g0589400","Os03g0248300","Os03g0248300",3.3445618,2.731105,null,"Os03g0102700",4.004913,"Os04g0569000",-1.3981885,{"$nulls":29},"MIR396D","miR396d, osa-miR396d, osa-MIR396d, OsmiR396d","MICRORNA396D","MICRORNA396d, osa-miRNA396d",null," Vegetative organ - Leaf,  Vegetative organ - Culm,  Other","GO:0035195 - gene silencing by miRNA, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009742 - brassinosteroid mediated signaling, GO:0009740 - gibberellic acid mediated signaling, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0009739 - response to gibberellin stimulus, GO:0009733 - response to auxin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0051782 - negative regulation of cell division, GO:0051511 - negative regulation of unidimensional cell growth","TO:0002677 - brassinosteroid sensitivity, TO:0000145 - internode length, TO:0000166 - gibberellic acid sensitivity, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000163 - auxin sensitivity","PO:0025034 - leaf ",{"$nulls":9},"RAP1B","MADS14, OsMADS14, FDRMADS6, RMADS211, AGL10","RICE APETALA 1B ","MADS box gene14, MADS-box transcription factor 14, Protein APETALA1-like B, Protein AGAMOUS-like 10",3," Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0006350 - transcription, GO:0003006 - reproductive developmental process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0030154 - cell differentiation, GO:0043565 - sequence-specific DNA binding, GO:0009908 - flower development, GO:0003700 - transcription factor activity, GO:0010228 - vegetative to reproductive phase transition","TO:0000622 - flower development trait","PO:0007615 - flower development stage ","Os03g0752800","LOC_Os03g54160.2, LOC_Os03g54160.1",{"$nulls":6},"qCSV-6-2","qCSV-6-2","consistency viscosity (QTL)-6-2","consistency viscosity (QTL)-6-2",null," Seed - Physiological traits - Taste",{"$nulls":11},"RAP1A","OsMADS15, FDRMADS3, RMADS215, MADS15, DEP","RICE APETALA 1A","MADS-box transcription factor 15, Protein APETALA1-like A, degenerative palea, MADS box gene15",7," Reproductive organ,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003006 - reproductive developmental process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0005515 - protein binding, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0010228 - vegetative to reproductive phase transition",null,"PO:0020094 - plant egg cell ","Os07g0108900","LOC_Os07g01820.6, LOC_Os07g01820.5, LOC_Os07g01820.4, LOC_Os07g01820.1, LOC_Os07g01820.2, LOC_Os07g01820.3","Os10g0109300","Os09g0431300","Os12g0503000",3.6242936,0,null,"SRS3","OsSRS3, SAR1, OsSAR1, KIN13A, OsKIN13A","SMALL AND ROUND SEED 3","small and round seed 3, small and round grains 1, SRS3/OsKINESIN-13A, OsKinesin-13A, OsKinesin13A, Kinesin13A, Kinesin 13A, Kinesin-13A",5," Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003777 - microtubule motor activity, GO:0016192 - vesicle-mediated transport, GO:0031982 - vesicle, GO:0010215 - cellulose microfibril organization, GO:0010090 - trichome morphogenesis, GO:0009826 - unidimensional cell growth, GO:0043622 - cortical microtubule organization, GO:0008152 - metabolic process, GO:0007018 - microtubule-based movement, GO:0005886 - plasma membrane, GO:0005874 - microtubule, GO:0005871 - kinesin complex, GO:0005795 - Golgi stack","TO:0020033 - glume length, TO:0000397 - grain size, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000145 - internode length",null,"Os05g0154700","LOC_Os05g06280.3, LOC_Os05g06280.2, LOC_Os05g06280.1"]
[{"$nulls":23},"Os05g0128900","Os03g0715600","Os02g0185300","Os02g0185300",-1.3711654,-1.1336023,null,"Os02g0594700",4.00402,"Os07g0670800",-1.3965899,{"$nulls":29},"SPLHM47","splHM47, HM47, OsPelo, OsPELO, PELO, LML1, OsLML1","SPOTTED-LEAF HM47","spotted-leaf HM47, OsPELOTA, PELOTA, lesion mimic leaf 1",4," Vegetative organ - Leaf,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus, GO:0005783 - endoplasmic reticulum, GO:0006412 - translation, GO:0071025 - RNA surveillance, GO:0032790 - ribosome disassembly, GO:0070481 - nuclear-transcribed mRNA catabolic process, non-stop decay, GO:0070651 - nonfunctional rRNA decay, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0060548 - negative regulation of cell death, GO:0009555 - pollen development, GO:0048366 - leaf development, GO:0005739 - mitochondrion, GO:0048364 - root development, GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009648 - photoperiodism, GO:0010337 - regulation of salicylic acid metabolic process, GO:0010150 - leaf senescence, GO:0009416 - response to light stimulus, GO:0043022 - ribosome binding","TO:0000293 - chlorophyll-a content, TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response, TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000421 - pollen fertility, TO:0000187 - anther color, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000180 - spikelet fertility, TO:0000074 - blast disease, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000339 - stem thickness, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000249 - leaf senescence, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000075 - light sensitivity, TO:0000432 - temperature response trait, TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000326 - leaf color","PO:0009039 - glume , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0001007 - pollen development stage , PO:0007520 - root development stage , PO:0001050 - leaf development stage , PO:0000026 - primary root tip , PO:0000025 - root tip , PO:0000293 - guard cell , PO:0020106 - leaf sheath auricle , PO:0020105 - ligule , PO:0009037 - lemma , PO:0009066 - anther , PO:0009073 - stigma , PO:0009053 - peduncle , PO:0025281 - pollen , PO:0020138 - leaf lamina vein , PO:0025034 - leaf , PO:0009005 - root ","Os04g0659900","LOC_Os04g56480.1, LOC_Os04g56480.2, LOC_Os04g56480.3",{"$nulls":7},"MADS27","OsMADS27, MADS-27a, OsSTA66, OsMADS27a","MADS BOX GENE 27","MADS box gene27, MADS-box transcription factor 27",2," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006995 - cellular response to nitrogen starvation, GO:0048364 - root development, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0051607 - defense response to virus, GO:0060359 - response to ammonium ion, GO:0010423 - negative regulation of brassinosteroid biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0016036 - cellular response to phosphate starvation","TO:0000227 - root length, TO:0002676 - brassinosteroid content, TO:0000148 - viral disease resistance, TO:0000656 - root development trait, TO:0000168 - abiotic stress trait","PO:0007520 - root development stage , PO:0009005 - root , PO:0009066 - anther ","Os02g0579600","LOC_Os02g36924.1",{"$nulls":6},"qCSV-6-1","qCSV-6-1","consistency viscosity (QTL)-6-1","consistency viscosity (QTL)-6-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX12","Oshox12, OsHox12","HOMEOBOX GENE 12","rice homeobox gene 12, Homeobox-leucine zipper protein HOX12, Homeodomain transcription factor HOX12, HD-ZIP protein HOX12",3," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0030912 - response to deep water, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0010336 - gibberellic acid homeostasis, GO:0009685 - gibberellin metabolic process, GO:0005634 - nucleus","TO:0001002 - inflorescence exsertion, TO:0002675 - gibberellic acid content, TO:0000524 - submergence tolerance","PO:0009049 - inflorescence ","Os03g0198600","LOC_Os03g10210.1","Os12g0530100","Os08g0540400","Os01g0719300",3.612622,0,null,"_","OsGRP1, GRP1, OsGPRP3, GPRP3","_","glycine-rich cell-wall structural protein 1, glycine- and proline-rich protein 3",5," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity",null,"TO:0000602 - total fat content, TO:0000397 - grain size, TO:0000162 - seed quality, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0002653 - endosperm storage protein content","PO:0009010 - seed ","Os05g0119200","LOC_Os05g02770.1"]
[{"$nulls":23},"Os05g0129200","Os06g0712500","Os10g0515200","Os10g0515200",-3.4951484,-1.4838794,null,"Os05g0206000",4.002067,"Os09g0353200",-1.3962272,{"$nulls":29},"DHS",null,"DROUGHT HYPERSENSITIVE",null,2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010025 - wax biosynthetic process, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os02g0682300","LOC_Os02g45780.1",{"$nulls":7},"CRY2","OsCRY2","CRYPTOCHROME 2","cryptochrome 2",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006281 - DNA repair, GO:0010224 - response to UV-B, GO:0003913 - DNA photolyase activity, GO:0009881 - photoreceptor activity, GO:0009648 - photoperiodism, GO:0009908 - flower development, GO:0009740 - gibberellic acid mediated signaling, GO:0051510 - regulation of unidimensional cell growth, GO:0009785 - blue light signaling pathway","TO:0002689 - leaf sheath length, TO:0002675 - gibberellic acid content, TO:0000159 - blue light sensitivity, TO:0000601 - UV-B light sensitivity","PO:0007615 - flower development stage ","Os02g0625000","LOC_Os02g41550.1, LOC_Os02g41550.2, LOC_Os02g41550.3, LOC_Os02g41550.4",{"$nulls":6},"qCSV-7","qCSV-7","consistency viscosity (QTL)-7","consistency viscosity (QTL)-7",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX13","Oshox13, OsHox13","HOMEOBOX GENE 13","rice homeobox gene 13, Homeobox-leucine zipper protein HOX13, Homeodomain transcription factor HOX13, HD-ZIP protein HOX13",3," Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009536 - plastid, GO:0030912 - response to deep water, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding","TO:0000524 - submergence tolerance",null,"Os03g0188900","LOC_Os03g08960.1","Os02g0698000","Os01g0117600","Os05g0355300",3.6020825,0,null,"BHLH77","OsbHLH077, bHLH077, bHLH77, OsNRP1, NRP1","BASIC HELIX-LOOP-HELIX PROTEIN 77","basic helix-loop-helix protein 077, NEGATIVE REGULATOR OF PHOTOSYNTHESIS 1",7," Character as QTL - Yield and productivity","GO:0015979 - photosynthesis, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000457 - total biomass yield, TO:0000316 - photosynthetic ability",null,"Os07g0471900","LOC_Os07g28890.1"]
[{"$nulls":23},"Os05g0194900","Os07g0681200","Os11g0119700","Os11g0119700",1.745901,2.4014504,null,"Os02g0285300",4.0003457,"Os09g0376900",-1.3946184,{"$nulls":29},"PSL1","OsPGL13, PGL13, OsPSL1, OsPG1, PG1, LTN-212","PHOTO-SENSITIVE LEAF ROLLING 1","Polygalacturonases-Like 13, PG-like 13, leaf tip necrosis 212, Polygalacturonase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004650 - polygalacturonase activity, GO:0005576 - extracellular region, GO:0005975 - carbohydrate metabolic process, GO:0070265 - necrotic cell death, GO:0009414 - response to water deprivation, GO:0052386 - cell wall thickening, GO:0045490 - pectin catabolic process, GO:0009642 - response to light intensity, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000040 - panicle length, TO:0000605 - hydrogen peroxide content, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0000085 - leaf rolling, TO:0000276 - drought tolerance, TO:0000441 - humidity related trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0296200","LOC_Os01g19170.1",{"$nulls":7},"SDG725","OsSDG725, OsSET8, ASHH2","SET DOMAIN GROUP PROTEIN 725","SET Domain Group Protein725, SET DOMAIN GROUP725, SET protein 8, \\ABSENT, SMALL, OR HOMEOTIC DISCS 1 HOMOLOG 2\\\"\"",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018024 - histone-lysine N-methyltransferase activity, GO:0005634 - nucleus, GO:0034968 - histone lysine methylation, GO:2000028 - regulation of photoperiodism, flowering, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0009742 - brassinosteroid mediated signaling, GO:0009908 - flower development, GO:0008270 - zinc ion binding","TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0002616 - flowering time, TO:0000391 - seed size, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0000456 - spikelet number","PO:0007615 - flower development stage ","Os02g0554000","LOC_Os02g34850.1",{"$nulls":6},"qSBV-1","qSBV-1","setback viscosity (QTL)-1","setback viscosity (QTL)-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX16","Oshox16, OsHox16","HOMEOBOX GENE 16","rice homeobox gene 16, Homeobox-leucine zipper protein HOX16, Homeodomain transcription factor HOX16, HD-ZIP protein HOX16",2," Tolerance and resistance - Stress tolerance,  Other","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription","TO:0000259 - heat tolerance",null,"Os02g0729700","LOC_Os02g49700.3, LOC_Os02g49700.1, LOC_Os02g49700.2","Os01g0720400","Os09g0547500","Os12g0111600",3.5982368,0,null,"LGS1","OsbHLH107, bHLH107","LARGER GRAIN SIZE 1","basic helix-loop-helix protein 107, larger grain size 1",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0046983 - protein dimerization activity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000396 - grain yield, TO:0000397 - grain size",null,"Os02g0805250","LOC_Os02g56140.1"]
[{"$nulls":23},"Os05g0247100","Os04g0412200","Os04g0573900","Os04g0573900",-1.9732274,-1.538496,null,"Os04g0422300",3.9916866,"Os09g0467200",-1.392368,{"$nulls":29},"TL",null,"TWISTED LEAF",null,12," Vegetative organ - Leaf,  Other","GO:0048366 - leaf development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009965 - leaf morphogenesis",null,"PO:0001050 - leaf development stage ","Os12g0124900",{"$nulls":8},"AGP1","OsAGP1","ARABINOGALACTAN PROTEIN 1","Arabinogalactan protein 1",8," Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0032578 - aleurone grain membrane, GO:0031225 - anchored to membrane, GO:0005773 - vacuole, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0008585 - female gonad development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009010 - seed , PO:0001083 - inflorescence development stage , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os08g0482300","LOC_Os08g37630.1",{"$nulls":6},"qSBV-5-1","qSBV-5-1","setback viscosity (QTL)-5-1","setback viscosity (QTL)-5-1",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX2","Oshox2, OsHox2","HOMEOBOX GENE 2","rice homeobox gene 2, Homeobox-leucine zipper protein HOX2, Homeodomain transcription factor HOX2, HD-ZIP protein HOX2",6," Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0030912 - response to deep water, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000524 - submergence tolerance",null,"Os06g0140700","LOC_Os06g04870.1","Os04g0111900","Os07g0437500","Os05g0593900",3.5845559,0,null,"GIF1","OsGIF1","GRF-INTERACTING FACTOR 1","GRF-interacting factor 1",11," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000240 - sterile lemma length, TO:0000397 - grain size",null,"Os11g0615200","LOC_Os11g40100.3, LOC_Os11g40100.2, LOC_Os11g40100.1"]
[{"$nulls":23},"Os05g0375400","Os06g0725300","Os12g0119000","Os12g0119000",1.7505115,2.4901547,null,"Os06g0710500",3.9894726,"Os09g0444700",-1.3908076,{"$nulls":29},"ZFP7 ","OsZFP7","ZINC FINGER PROTEIN 7","zinc finger protein 7",7," Vegetative organ - Leaf,  Other","GO:0005634 - nucleus, GO:0003676 - nucleic acid binding, GO:0048366 - leaf development, GO:0009965 - leaf morphogenesis",null,"PO:0001050 - leaf development stage ","Os07g0593000","LOC_Os07g40300.1",{"$nulls":7},"AGP27","OsAGP27","ARABINOGALACTAN PROTEIN 27","Arabinogalactan protein 27",7," Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009555 - pollen development, GO:0008585 - female gonad development, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001007 - pollen development stage , PO:0001083 - inflorescence development stage , PO:0009073 - stigma , PO:0009049 - inflorescence ","Os07g0573900","LOC_Os07g38630.1",{"$nulls":6},"qSBV-5-2","qSBV-5-2","setback viscosity (QTL)-5-2","setback viscosity (QTL)-5-2",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX24","Oshox24, OsHox24, OsSLI1","HOMEOBOX GENE 24","rice homeobox gene 24, Homeobox-leucine zipper protein HOX24, Homeodomain transcription factor HOX24, HD-ZIP protein HOX24, stress largely induced 1",2," Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0006950 - response to stress, GO:0009738 - abscisic acid mediated signaling","TO:0000615 - abscisic acid sensitivity, TO:0000168 - abiotic stress trait",null,"Os02g0649300","LOC_Os02g43330.1","Os08g0556900","Os05g0365300","Os03g0346200",3.567796,0,null,"MOC2","FR, OsFR, FBP1, OsFBP1, OsMOC2, OscFBP1, cFBP1, MOC2/FBP1","MONOCULM 2","cytosolic fructose 1, 6-bisphosphatase, cytosolic FruP2ase, monoculm 2, monoculm2, cytosolic fructose-1, 6-bisphosphatase 1",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009750 - response to fructose stimulus, GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity, GO:0030388 - fructose 1,6-bisphosphate metabolic process, GO:0005986 - sucrose biosynthetic process, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0005829 - cytosol, GO:0005983 - starch catabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding","TO:0000329 - tillering ability, TO:0000515 - relative growth rate, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000326 - leaf color",null,"Os01g0866400","LOC_Os01g64660.1, LOC_Os01g64660.2, LOC_Os01g64660.3, LOC_Os01g64660.4"]
[{"$nulls":23},"Os05g0405000","Os07g0189700","Os04g0269600","Os04g0269600",-2.9795387,2.4455447,null,"Os10g0475000",3.9864204,"Os12g0631600",-1.389067,{"$nulls":29},"PSL15","OsPSL15","PREMATURE SENESCENCE LEAF 15","premature senescence leaf 15",null," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0010150 - leaf senescence, GO:0008219 - cell death, GO:0009658 - chloroplast organization","TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000605 - hydrogen peroxide content, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence, TO:0000326 - leaf color","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"AGP30","OsAGP30, DLN50, OsDLN50","ARABINOGALACTAN PROTEIN 30","Arabinogalactan protein 30, DLN repressor 50, DLN motif protein 50",2," Reproductive organ - Inflorescence,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005622 - intracellular, GO:0008585 - female gonad development, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0003676 - nucleic acid binding, GO:0008270 - zinc ion binding","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009073 - stigma ","Os02g0196100","LOC_Os02g10240.1",{"$nulls":6},"qSBV-6","qSBV-6","setback viscosity (QTL)-6","setback viscosity (QTL)-6",null," Seed - Physiological traits - Taste",{"$nulls":11},"HOX28","Oshox28, OsHox28","HOMEOBOX GENE 28","rice homeobox gene 28, Homeobox-leucine zipper protein HOX28, Homeodomain transcription factor HOX28, HD-ZIP protein HOX28",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010600 - regulation of auxin biosynthetic process, GO:0030912 - response to deep water, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0010252 - auxin homeostasis, GO:0009959 - negative gravitropism","TO:0000567 - tiller angle, TO:0000524 - submergence tolerance, TO:0002693 - gravity response trait, TO:0002672 - auxin content",null,"Os06g0140400","LOC_Os06g04850.1","Os05g0217700","Os05g0387700","Os03g0233900",3.5551937,0,null,"VIP2","IPI1, RIP1, OsVIP2, OsIPI1, OsRIP1","_","Putative VIP2 protein, IPA1 INTERACTING PROTEIN1, IPA1 INTERACTING PROTEIN 1, ROD1 interacting protein 1",1," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0000209 - protein polyubiquitination, GO:0008270 - zinc ion binding, GO:0004842 - ubiquitin-protein ligase activity, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000255 - sheath blight disease resistance, TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000437 - male sterility, TO:0000371 - yield trait, TO:0000017 - anatomy and morphology related trait","PO:0025034 - leaf ","Os01g0350900 ","LOC_Os01g24880.1, LOC_Os01g24880.2"]
[{"$nulls":23},"Os05g0438600","Os04g0337500","Os01g0100400","Os01g0100400",2.7763739,1.2615339,null,"Os07g0173601",3.9829566,"Os01g0279300",-1.3882551,{"$nulls":29},"PSL50","OsPSL50","PREMATURE SENESCENCE LEAF 50","premature senescence leaf 50",null," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0008219 - cell death, GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization","TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"FLA7","OsFLA7","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7","fasciclin-like AGP 7, fasciclin-like arabinogalactan protein 7",1," Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0008585 - female gonad development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009073 - stigma ","Os01g0668100","LOC_Os01g47780.1",{"$nulls":6},"qSH-1-2(t) (qSHT-1)","qSH-1-2(t) (qSHT-1)","shattering (QTL)-1-2(t)","shattering (QTL)-1-2(t)",1," Seed - Physiological traits - Shattering",{"$nulls":11},"HAP2A","OsHAP2A, NF-YA, CBF-B, NF-YA7, OsNF-YA7, NFYA7","HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX","NUCLEAR FACTOR-Y subunit A7, NUCLEAR FACTOR-Y subunit NF-YA7, NF-YA transcription factor 7, NF-YA subunit 7, NF-YA family 7",8," Tolerance and resistance - Stress tolerance,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0006350 - transcription","TO:0000276 - drought tolerance",null,"Os08g0196700","LOC_Os08g09690.1, LOC_Os08g09690.2","Os06g0240050","Os04g0526600","Os02g0652100",3.5550115,0,null,"ZHD2","OsZHD2","_","zinc finger homeodomain class homeobox transcription factor 2",8," Vegetative organ - Leaf,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0048366 - leaf development, GO:0048364 - root development, GO:0003677 - DNA binding, GO:0010365 - positive regulation of ethylene biosynthetic process","TO:0000655 - leaf development trait, TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000396 - grain yield, TO:0002681 - leaf curling, TO:0000586 - seminal root length, TO:0000656 - root development trait, TO:0001013 - lateral root number","PO:0007520 - root development stage , PO:0000025 - root tip , PO:0020148 - shoot apical meristem ","Os08g0479400","LOC_Os08g37400.1"]
[{"$nulls":23},"Os05g0491200","Os06g0703500","Os04g0372700","Os04g0372700",-1.9861366,-1.1529967,null,"Os08g0509400",3.9792273,"Os03g0674900",-1.3870072,{"$nulls":29},"PSL89","OsPSL89","PREMATURE SENESCENCE LEAF 89","premature senescence leaf 89",null," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0008219 - cell death","TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000249 - leaf senescence, TO:0000295 - chlorophyll-b content, TO:0000605 - hydrogen peroxide content, TO:0000316 - photosynthetic ability, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"KAN1","OsKAN1, OsKAN2, KAN2","KANADI 1","OsKANADI1, KANADI1, OsKANADI2, KANADI2",2," Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus",null,null,"Os02g0696900","LOC_Os02g46940.1",{"$nulls":6},"qSH-4-2(t) (qSHT-4)","qSH-4-2(t) (qSHT-4)","seed shattering (QTL)-4-2(t)","seed shattering (QTL)-4-2(t)",4," Seed - Physiological traits - Shattering",{"$nulls":11},"HAP2F","OsHAP2F, NF-YA, CBF-B, NF-YA10, OsNF-YA10, NFYA10","HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX","NUCLEAR FACTOR-Y subunit A10, NUCLEAR FACTOR-Y subunit NF-YA10, NF-YA transcription factor 10, NF-YA subunit 10, NF-YA family 10",12," Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os12g0618600","LOC_Os12g42400.1, LOC_Os12g42400.2, LOC_Os12g42400.3, LOC_Os12g42400.4","Os02g0483500","Os03g0826800","Os01g0326000",3.5228004,0,null,"FLO16","CMDH, OscMDH, cMDH, OsMDH, MDH, OsFLO16","FLOURY ENDOSPERM16","cytoplasmic malate dehydrogenase, malate dehydrogenase, NAD-dependent cytosolic malate dehydrogenase",10," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005634 - nucleus, GO:0005886 - plasma membrane, GO:0006099 - tricarboxylic acid cycle, GO:0005829 - cytosol, GO:0046686 - response to cadmium ion, GO:0044262 - cellular carbohydrate metabolic process, GO:0030060 - L-malate dehydrogenase activity, GO:0005774 - vacuolar membrane, GO:0009960 - endosperm development, GO:0042592 - homeostatic process, GO:0010043 - response to zinc ion, GO:0009651 - response to salt stress, GO:0009506 - plasmodesma, GO:0051775 - response to redox state, GO:0009570 - chloroplast stroma, GO:0048316 - seed development, GO:0048046 - apoplast, GO:0006108 - malate metabolic process","TO:0000100 - shrunken endosperm, TO:0000196 - amylose content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000602 - total fat content, TO:0000328 - sucrose content, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content, TO:0000104 - floury endosperm, TO:0000346 - tiller number","PO:0001170 - seed development stage , PO:0007633 - endosperm development stage , PO:0020104 - leaf sheath ","Os10g0478200","LOC_Os10g33800.3, LOC_Os10g33800.1, LOC_Os10g33800.2"]
[{"$nulls":23},"Os05g0495700","Os08g0104600","Os06g0203200","Os06g0203200",3.1043072,2.4872782,null,"Os05g0507000",3.9752514,"Os03g0314400",-1.3869253,{"$nulls":29},"PSL117","OsPSL117","PREMATURE SENESCENCE LEAF 117","premature senescence leaf 117",null," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0010150 - leaf senescence, GO:0008219 - cell death, GO:0009658 - chloroplast organization","TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000249 - leaf senescence, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000605 - hydrogen peroxide content, TO:0000495 - chlorophyll content","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"ROPGEF2","Os RopGEF2, OsRopGEF2, RopGEF2, OsSTA159","ROP-SPECIFIC GUANINE NUCLEOTIDE EXCHANGE FACTOR 2","GEF for ROP 2, guanine nucleotide exchange factor for Rop 2, Rop-specific GEF2, Rop-specific guanine nucleotide exchange factor 2",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0005886 - plasma membrane, GO:0009860 - pollen tube growth, GO:0005089 - Rho guanyl-nucleotide exchange factor activity, GO:0009793 - embryonic development ending in seed dormancy, GO:0005737 - cytoplasm, GO:0005634 - nucleus",null,"PO:0009066 - anther ","Os05g0560100 ","LOC_Os05g48640.1",{"$nulls":6},"qSH-8-1(t) (qSHT-8)","qSH-8-1(t) (qSHT-8)","shattering (QTL)-8-1(t)","shattering (QTL)-8-1(t)",8," Seed - Physiological traits - Shattering",{"$nulls":11},"HAP3D","OsHAP3D, OsEnS-83, OsNF-YB9, NF-YB9, NFYB9, OsLEC1A, LEC1A","HAP3D SUBUNIT OF CCAAT-BOX BINDING COMPLEX ","HAP3 subunit D, LEC1-type 3 subunit protein-D, endosperm-specific gene 83, NUCLEAR FACTOR-Y subunit B9, NUCLEAR FACTOR-Y subunit NF-YB9, HAP3 SUBUNIT D, NF-YB subunit 9, NF-YB family 9",6," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Other","GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009845 - seed germination, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0005737 - cytoplasm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009790 - embryonic development","TO:0000064 - embryo related trait, TO:0000137 - days to heading, TO:0000276 - drought tolerance, TO:0000485 - sterility related trait","PO:0001170 - seed development stage , PO:0009010 - seed , PO:0000003 - whole plant , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os06g0285200","LOC_Os06g17480.1","Os05g0480000","Os03g0811100","Os12g0601400",3.5169733,0,null,"YL3","ONAC109, NAC109, OsYL3","YELLOW LEAF 3","NAC domain-containing protein 109, yellow leaf 3",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046345 - abscisic acid catabolic process, GO:0009658 - chloroplast organization, GO:0051510 - regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010150 - leaf senescence, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0010364 - regulation of ethylene biosynthetic process","TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000357 - growth and development trait, TO:0000325 - soluble protein content, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000227 - root length, TO:0000145 - internode length, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000592 - 1000-dehulled grain weight, TO:0002667 - abscisic acid content, TO:0002675 - gibberellic acid content, TO:0002672 - auxin content","PO:0001054 - 4 leaf senescence stage ","Os09g0552800","LOC_Os09g38000.1"]
[{"$nulls":23},"Os05g0533600","Os07g0562700","Os04g0359100","Os04g0359100",5.884866,4.969017,null,"Os01g0847100",3.962283,"Os10g0337700",-1.3860329,{"$nulls":29},"PSL270","OsPSL270","PREMATURE SENESCENCE LEAF 270","premature senescence leaf 270",null," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0008219 - cell death, GO:0009646 - response to absence of light, GO:0009658 - chloroplast organization, GO:0010150 - leaf senescence, GO:0009737 - response to abscisic acid stimulus","TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000316 - photosynthetic ability, TO:0000605 - hydrogen peroxide content, TO:0000295 - chlorophyll-b content, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"RAD51D","OsRAD51D, OsRad51D, OsRAD51D.1, OsRAD51D.2, OsRAD51D.3","DNA REPAIR PROTEIN RAD51D","DNA repair protein RAD51D",9," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007130 - synaptonemal complex assembly, GO:0006302 - double-strand break repair, GO:0000723 - telomere maintenance, GO:0010332 - response to gamma radiation, GO:0045002 - double-strand break repair via single-strand annealing, GO:0045003 - double-strand break repair via synthesis-dependent strand annealing, GO:0007126 - meiosis, GO:0007129 - synapsis, GO:0022414 - reproductive process","TO:0000161 - radiation response trait, TO:0000225 - stamen number, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000485 - sterility related trait",null,"Os09g0104200 ","LOC_Os09g01680.1, LOC_Os09g01680.2, LOC_Os09g01680.3",{"$nulls":6},"qSH-11-1(t) (qSHT-11)","qSH-11-1(t) (qSHT-11)","shattering (QTL)-11-1(t)","shattering (QTL)-11-1(t)",11," Seed - Physiological traits - Shattering",{"$nulls":11},"HAP3E","OsHAP3E, OsLEC1/OsHAP3E, OsLEC1, LEC1, OsNF-YB7, NF-YB7, NFYB7, L1L","HAP3E SUBUNIT OF CCAAT-BOX BINDING COMPLEX ","HAP3 subunit E, LEC1-type 3 subunit protein-E, leafy cotyledon 1, NUCLEAR FACTOR-Y subunit B7, NUCLEAR FACTOR-Y subunit NF-YB7, LEC1-LIKE, LEAFY COTYLEDON1-LIKE, HAP3 SUBUNIT E, NF-YB subunit 7, NF-YB family 7",2," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0048579 - negative regulation of long-day photoperiodism, flowering","TO:0000137 - days to heading, TO:0000064 - embryo related trait, TO:0000485 - sterility related trait, TO:0000276 - drought tolerance","PO:0009009 - plant embryo ","Os02g0725700","LOC_Os02g49370.1, LOC_Os02g49370.2","Os02g0716500","Os07g0605200","Os03g0855100",3.5127227,0,null,"NAC139","ONAC139, OsNAM","NAC DOMAIN-CONTAINING PROTEIN 139","NAC domain-containing protein 139, no apical meristem",12," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0010150 - leaf senescence, GO:0010089 - xylem development, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000625 - spikelet density, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0006001 - salt tolerance",null,"Os12g0477400","LOC_Os12g29330.1"]
[{"$nulls":23},"Os06g0133000","Os01g0851700","Os06g0549300","Os06g0549300",5.287023,3.1276186,null,"Os11g0648100",3.9590158,"Os04g0402100",-1.3851147,{"$nulls":29},"_","MRG702, OsMRG702","_","MORF-RELATED GENE702, MORF-RELATED GENE 702",11," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0005634 - nucleus, GO:0009741 - response to brassinosteroid stimulus, GO:2000028 - regulation of photoperiodism, flowering, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0016573 - histone acetylation, GO:0016021 - integral to membrane, GO:0006325 - chromatin organization, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling","TO:0000145 - internode length, TO:0000040 - panicle length, TO:0002757 - flag leaf length, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000590 - grain weight, TO:0000456 - spikelet number",null,"Os11g0545600","LOC_Os11g34300.1, LOC_Os11g34300.2, LOC_Os11g34300.3, LOC_Os11g34305.1",{"$nulls":7},"BBX15","OsBBX15, OsCCT19, OsS, OsSTA162, CCT19, STA162","B-BOX-CONTAINING PROTEIN 15","B-box-containing protein 15, CCT domain-containing gene 19, CCT (CO, CO-LIKE and TOC1) domain protein 19, CCT domain protein 19",6," Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0007623 - circadian rhythm","TO:0000137 - days to heading","PO:0009066 - anther , PO:0025034 - leaf , PO:0007616 - flowering stage ","Os06g0103000","LOC_Os06g01340.1",{"$nulls":6},"qDOR-2","qDOR-2","seed dormancy (QTL)-2","seed dormancy (QTL)-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5A","OsHAP5A, NF-YC, CBF-C, OsNF-YC1, Os-NF-YC1, NF-YC1, NFYC1, OsNF-YC4-2, NF-YC4-2","HAP5A SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C1 subunit, Nuclear factor Y C subunit 1, NUCLEAR FACTOR-Y subunit C1, NUCLEAR FACTOR-Y subunit NF-YC1, NF-YC subunit 1, NF-YC family 1",2," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000137 - days to heading, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os02g0170500","LOC_Os02g07450.1, LOC_Os02g07450.2","Os01g0956200","Os03g0150500","Os08g0518900",3.4670722,0,null,"XDH1","OsXDH1","XANTHINE DEHYDROGENASE 1","Xanthine dehydrogenase, xanthine dehydrogenase 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042554 - superoxide anion generation, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046466 - membrane lipid catabolic process, GO:0050660 - FAD binding, GO:0009055 - electron carrier activity, GO:0009414 - response to water deprivation, GO:0046110 - xanthine metabolic process, GO:0005829 - cytosol, GO:0000302 - response to reactive oxygen species, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009416 - response to light stimulus, GO:0009408 - response to heat, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0004854 - xanthine dehydrogenase activity, GO:0005506 - iron ion binding","TO:0000371 - yield trait, TO:0000734 - grain length, TO:0000460 - light intensity sensitivity, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000605 - hydrogen peroxide content, TO:0000382 - 1000-seed weight, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000249 - leaf senescence, TO:0000432 - temperature response trait","PO:0009047 - stem , PO:0009005 - root , PO:0025034 - leaf ","Os03g0429800","LOC_Os03g31550.1, LOC_Os03g31550.2"]
[{"$nulls":23},"Os06g0156900","Os03g0828100","Os01g0597800","Os01g0597800",-4.481426,-2.084027,null,"Os01g0652800",3.9576836,"Os05g0548900",-1.3847553,{"$nulls":29},"_","RAV6","_","RELATED TO ABSCISIC ACID INSENSITIVE3 (ABI3)/VIVIPAROUS1 (VP1) 6, RAV family gene 6",2," Vegetative organ - Leaf,  Seed - Morphological traits,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0010268 - brassinosteroid homeostasis, GO:0010422 - regulation of brassinosteroid biosynthetic process","TO:0000146 - seed length, TO:0000391 - seed size, TO:0000304 - seed thickness, TO:0000206 - leaf angle, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight",null,"Os02g0683500","LOC_Os02g45850.1",{"$nulls":7},"BBX19","OsBBX19, OsM, DTH2, qDTH-2, OsCCT22, CCT22","B-BOX-CONTAINING PROTEIN 19","B-box-containing protein 19, Days to heading on chromosome 2, CCT domain-containing gene 22, CCT (CO, CO-LIKE and TOC1) domain protein 22, CCT domain protein 22",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010039 - response to iron ion, GO:0008270 - zinc ion binding, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0007623 - circadian rhythm, GO:0010045 - response to nickel ion, GO:0046686 - response to cadmium ion, GO:0048576 - positive regulation of short-day photoperiodism, flowering","TO:0006001 - salt tolerance, TO:0000224 - iron sensitivity, TO:0000303 - cold tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000207 - plant height, TO:0002616 - flowering time, TO:0000172 - jasmonic acid sensitivity, TO:0000137 - days to heading","PO:0009010 - seed , PO:0009006 - shoot system , PO:0025034 - leaf ","Os06g0298200","LOC_Os06g19444.2, LOC_Os06g19444.1",{"$nulls":6},"qDOR-3-1","qDOR-3-1","seed dormancy (QTL)-3-1","seed dormancy (QTL)-3-1",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5B","OsHAP5B, NF-YC, CBF-C, OsNF-YC4, Os-NF-YC4, NF-YC4, NFYC4, OsNF-YC4-3, NF-YC4-3","HAP5B SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C4 subunit, Nuclear factor Y C subunit 4, NUCLEAR FACTOR-Y subunit C4, NUCLEAR FACTOR-Y subunit NF-YC4, NF-YC subunit 4, NF-YC family 4",6," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0016602 - CCAAT-binding factor complex, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002616 - flowering time, TO:0000137 - days to heading",null,"Os06g0667100","LOC_Os06g45640.1","Os04g0620700","Os01g0787000","Os03g0654900",3.4481661,0,null,"SAP16","OsSAP16","STRESS ASSOCIATED PROTEIN GENE 16","C2H2 transcription factor, stress associated protein 16, stress-associated protein 16",7," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0010118 - stomatal movement, GO:0006950 - response to stress, GO:0009651 - response to salt stress, GO:0008270 - zinc ion binding, GO:0009845 - seed germination, GO:0009751 - response to salicylic acid stimulus, GO:0009409 - response to cold, GO:0010109 - regulation of photosynthesis, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding","TO:0000043 - root anatomy and morphology trait, TO:0000430 - germination rate, TO:0000276 - drought tolerance, TO:0000164 - stress trait, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000352 - plant dry weight, TO:0000207 - plant height, TO:0000522 - stomatal conductance, TO:0001027 - net photosynthetic rate, TO:0000303 - cold tolerance",null,"Os07g0569700","LOC_Os07g38240.1"]
[{"$nulls":23},"Os06g0326400","Os08g0276100","Os06g0187500","Os06g0187500",-1.6454324,3.2025073,null,"Os03g0416200",3.9503605,"Os01g0773600",-1.3841864,{"$nulls":29},"REL1","OsREL1","ROLLED AND ERECT LEAF 1","rolled and erect leaf 1, rolled and erect 1",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000396 - grain yield, TO:0000085 - leaf rolling, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0002730 - grain shape","PO:0009013 - portion of meristem tissue ","Os01g0863500",{"$nulls":8},"_","OSINV3, OsINV3, INV3, OsVIN2, VIN2, VINV","_","invertase 3, fructosyl transferase, vacuolar invertase 2",2," Biochemical character,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005987 - sucrose catabolic process, GO:0015770 - sucrose transport, GO:0019252 - starch biosynthetic process, GO:0005773 - vacuole, GO:0005975 - carbohydrate metabolic process, GO:0004575 - sucrose alpha-glucosidase activity, GO:0009505 - plant-type cell wall, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000590 - grain weight, TO:0000657 - spikelet anatomy and morphology trait, TO:0000307 - hexose content, TO:0000300 - glucose content, TO:0000696 - starch content, TO:0000397 - grain size, TO:0000328 - sucrose content, TO:0000391 - seed size","PO:0001170 - seed development stage , PO:0009086 - endocarp ","Os02g0106100","LOC_Os02g01590.2, LOC_Os02g01590.1",{"$nulls":6},"qDOR-3-2","qDOR-3-2","seed dormancy (QTL)-3-2","seed dormancy (QTL)-3-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5C","OsHAP5C, NF-YC, CBF-C, OsNF-YC2, Os-NF-YC2, NF-YC2, NFYC2, OsNF-YC4-1, NF-YC4-1","HAP5C SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C2 subunit, Nuclear factor Y C subunit 2, NUCLEAR FACTOR-Y subunit C2, NUCLEAR FACTOR-Y subunit NF-YC2, NF-YC subunit 2, NF-YC family 2",3," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0009414 - response to water deprivation, GO:0006350 - transcription","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0002616 - flowering time, TO:0000696 - starch content",null,"Os03g0251350","LOC_Os03g14669.1, LOC_Os03g14669.2","Os02g0433600","Os06g0691400","Os05g0386800",3.421819,0,null,"LHR","OsLHR","LONG HAIRPIN-STRUCTURE CONTAINING NON-CODING RNA","Long Hairpin-structure containing non-coding RNA",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016246 - RNA interference, GO:0006306 - DNA methylation","TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000522 - stomatal conductance, TO:0000592 - 1000-dehulled grain weight, TO:0000370 - leaf width, TO:0000207 - plant height","PO:0009010 - seed , PO:0009005 - root ","Os12g0618400"]
[{"$nulls":23},"Os06g0561000","Os06g0187500","Os01g0926600","Os01g0926600",1.158722,2.0889995,null,"Os09g0572500",3.9440174,"Os03g0238300",-1.3839077,{"$nulls":29},"REL2","OsREL2, OsDLT10, DLT10, RSD1, OsRSD1, RSD1/REL2","ROLLED AND ERECT LEAF 2","rolled and erect leaf 2, dwarf and low tillering 10, rice stomata developmental defect 1",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010374 - stomatal complex development, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0009965 - leaf morphogenesis, GO:0009733 - response to auxin stimulus","TO:0000276 - drought tolerance, TO:0000293 - chlorophyll-a content, TO:0000566 - stomatal frequency, TO:0000163 - auxin sensitivity, TO:0002681 - leaf curling, TO:0000329 - tillering ability, TO:0000447 - filled grain number, TO:0000661 - tiller bud dormancy, TO:0002730 - grain shape, TO:0000346 - tiller number, TO:0002672 - auxin content, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0001018 - transpiration rate, TO:0000326 - leaf color, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000295 - chlorophyll-b content, TO:0001027 - net photosynthetic rate","PO:0004709 - axillary bud , PO:0009000 - pulvinus , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0020141 - stem node ","Os10g0562700","LOC_Os10g41310.1",{"$nulls":7},"DST","OsDST, DLN102, OsDLN102","DROUGHT AND SALT TOLERANCE","zinc finger transcription factor DST, Drought and Salt Tolerance gene, DLN repressor 102, DLN motif protein 102",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010119 - regulation of stomatal movement, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress","TO:0002759 - grain number, TO:0006001 - salt tolerance, TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0000143 - relative biomass, TO:0000370 - leaf width, TO:0001016 - relative chlorophyll content, TO:0000095 - osmotic response sensitivity, TO:0000456 - spikelet number, TO:0000136 - relative water content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000608 - sodium content, TO:0000609 - potassium content",null,"Os03g0786400","LOC_Os03g57240.1",{"$nulls":6},"qDOR-3-3","qDOR-3-3","seed dormancy (QTL)-3-3","seed dormancy (QTL)-3-3",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5D","OsHAP5D, NF-YC, CBF-C, OsNF-YC6, Os-NF-YC6, NF-YC6, NFYC6","HAP5D SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C6 subunit, Nuclear factor Y C subunit 6, NUCLEAR FACTOR-Y subunit C6, NUCLEAR FACTOR-Y subunit NF-YC6, NF-YC subunit 6, NF-YC family 6",8," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048578 - positive regulation of long-day photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm, GO:0016602 - CCAAT-binding factor complex","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002616 - flowering time",null,"Os08g0496500","LOC_Os08g38780.1","Os02g0603600","Os08g0155900","Os04g0340300",3.3795261,0,null,"FBOX33","OsFbox033, OsFbox33, Fbox33, Os_F0114, OsFBK1, FBK1","F-BOX PROTEIN 33","F-box protein 33, F-box Kelch 1",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0048437 - floral organ development, GO:0009733 - response to auxin stimulus, GO:0019005 - SCF ubiquitin ligase complex, GO:0048364 - root development, GO:0048653 - anther development, GO:0052386 - cell wall thickening","TO:0000269 - 100-seed weight, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000531 - anther length, TO:0000625 - spikelet density, TO:0000564 - spikelet width, TO:0006013 - carpel number, TO:0000225 - stamen number, TO:0006029 - glume number, TO:0000734 - grain length, TO:0000391 - seed size, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002600 - flower organ size, TO:0006038 - floral organ number, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000622 - flower development trait, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance","PO:0000040 - adventitious root nodule , PO:0009013 - portion of meristem tissue , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0025545 - anther wall tapetum cell , PO:0009010 - seed , PO:0009046 - flower , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage , PO:0025585 - floral organ formation stage , PO:0007520 - root development stage , PO:0001004 - anther development stage ","Os01g0659900","LOC_Os01g47050.1"]
[{"$nulls":23},"Os06g0573600","Os03g0673800","Os03g0300900","Os03g0300900",2.4319026,1.697187,null,"Os05g0426800",3.9381912,"Os02g0717700",-1.3834342,{"$nulls":29},"ACL1","OsACL1, ACL2, OsACL2","ABAXIALLY CURLED LEAF 1","abaxially curled leaf 1",4," Vegetative organ - Leaf","GO:0048366 - leaf development","TO:0000207 - plant height","PO:0020104 - leaf sheath , PO:0001050 - leaf development stage , PO:0025034 - leaf ","Os04g0415000","LOC_Os04g33860.1",{"$nulls":7},"_","OsBLH1","_","BEL1-like homeodomain gene 1",12," Reproductive organ - Spikelet, flower, glume, awn","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus",null,null,"Os12g0160500","LOC_Os12g06340.1, LOC_Os12g06340.2, LOC_Os12g06340.3",{"$nulls":6},"qDOR-5-1","qDOR-5-1","seed dormancy (QTL)-5-1","seed dormancy (QTL)-5-1",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5E","OsHAP5E, NF-YC, CBF-C, OsNF-YC7, Os-NF-YC7, NF-YC7, NFYC7","HAP5E SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C7 subunit, Nuclear factor Y C subunit 7, NUCLEAR FACTOR-Y subunit C7, NUCLEAR FACTOR-Y subunit NF-YC7, NF-YC subunit 7, NF-YC family 7",9," Tolerance and resistance - Stress tolerance,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0016602 - CCAAT-binding factor complex, GO:0006350 - transcription","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance",null,"Os09g0480700","LOC_Os09g30310.1","Os07g0676600","Os01g0212400","Os10g0456800",3.3594925,0,null,"GH3-8","OsGH3-8, OsMGH3, OsGH3.8, GH3.8, OsGH3-2","GH3-8",null,7," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0016874 - ligase activity, GO:0009908 - flower development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009852 - auxin catabolic process, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0006955 - immune response, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000020 - black streak dwarf virus resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0002672 - auxin content, TO:0000622 - flower development trait, TO:0000172 - jasmonic acid sensitivity","PO:0009066 - anther , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0007615 - flower development stage ","Os07g0592600","LOC_Os07g40290.1"]
[{"$nulls":23},"Os06g0664200","Os11g0153400","Os01g0176000","Os01g0176000",-3.408371,-2.8266761,null,"Os11g0530600",3.9305646,"Os02g0582300",-1.3830237,{"$nulls":29},"DEL1","OsPLL12, PLL12","DWARF AND EARLY-SENESCENCE LEAF 1","dwarf and early-senescence leaf1, Pectate lyase-like 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0022402 - cell cycle process, GO:0030570 - pectate lyase activity, GO:0046872 - metal ion binding, GO:0009658 - chloroplast organization, GO:0048573 - photoperiodism, flowering, GO:0048316 - seed development, GO:0010150 - leaf senescence, GO:0045490 - pectin catabolic process, GO:0043069 - negative regulation of programmed cell death, GO:0010394 - homogalacturonan metabolic process","TO:0000653 - seed development trait, TO:0000605 - hydrogen peroxide content, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0001015 - photosynthetic rate, TO:0000132 - basal internode diameter, TO:0000145 - internode length, TO:0001013 - lateral root number, TO:0000227 - root length, TO:0000249 - leaf senescence, TO:0006006 - monosaccharide content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000695 - leaf margin color, TO:0000495 - chlorophyll content, TO:0000137 - days to heading, TO:0000326 - leaf color","PO:0009047 - stem , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0000003 - whole plant , PO:0001170 - seed development stage ","Os10g0457200","LOC_Os10g31910.1",{"$nulls":7},"KAN4","OsKAN4","KANADI 4","OsKANADI4, KANADI4",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0003682 - chromatin binding",null,null,"Os03g0766500","LOC_Os03g55760.1",{"$nulls":6},"qDOR-5-2","qDOR-5-2","seed dormancy (QTL)-5-2","seed dormancy (QTL)-5-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"HAP5F","OsHAP5F, NF-YC, CBF-C, OsNF-YC5, Os-NF-YC5, NF-YC5, NFYC5","HAP5F SUBUNIT OF CCAAT-BOX BINDING COMPLEX","Nuclear factor Y C5 subunit, Nuclear factor Y C subunit 5, NUCLEAR FACTOR-Y subunit C5, NUCLEAR FACTOR-Y subunit NF-YC5, NF-YC subunit 5, NF-YC family 5",8," Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0016602 - CCAAT-binding factor complex, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os08g0206500",null,"Os01g0778100","Os03g0195300","Os01g0924966",3.3535302,0,null,"NH1","OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2, DLN5, OsDLN5","NPR1 HOMOLOG 1","NPR1-like 1, NPR1 homologue 1, nonexpresser of PR genes 1, Arabidopsis NPR1 homolog 1, non-expressor of pathogenesis-related gene 1, Arabidopsis NPR1 homologue 1, pathogenesis-related gene 2, nonexpressor of PR genes 1, Nonexpressor of Pathogenesis-Related Genes1, NONEXPRESSOR OF PATHOGENESIS-RELATED1 HOMOLOG1, NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1, non-expressor pathogenesis-related 1, DLN repressor 5, DLN motif protein 5",1," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048364 - root development, GO:0010200 - response to chitin, GO:0016563 - transcription activator activity, GO:0009814 - defense response, incompatible interaction, GO:0002213 - defense response to insect, GO:0006952 - defense response, GO:0002237 - response to molecule of bacterial origin, GO:0009625 - response to insect, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0031348 - negative regulation of defense response, GO:0010112 - regulation of systemic acquired resistance, GO:0008219 - cell death, GO:0009408 - response to heat, GO:0009611 - response to wounding, GO:0006950 - response to stress, GO:0010942 - positive regulation of cell death, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009682 - induced systemic resistance, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009627 - systemic acquired resistance, GO:0050832 - defense response to fungus, GO:0009734 - auxin mediated signaling pathway","TO:0000401 - plant growth hormone sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity, TO:0000181 - seed weight, TO:0000445 - seed number, TO:0000656 - root development trait, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000424 - brown planthopper resistance, TO:0000074 - blast disease, TO:0000112 - disease resistance","PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os01g0194300","LOC_Os01g09800.1"]
[{"$nulls":23},"Os06g0677400","Os01g0232700","Os01g0201100","Os01g0201100",-1.9286584,-1.3511261,null,"Os09g0375600",3.929106,"Os02g0303200",-1.3828144,{"$nulls":29},"SLG","OsSLG","SLENDER GRAIN","slender grain",8," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0010143 - cutin biosynthetic process, GO:0005634 - nucleus, GO:0010268 - brassinosteroid homeostasis, GO:0001558 - regulation of cell growth, GO:0010229 - inflorescence development, GO:0010090 - trichome morphogenesis, GO:0005737 - cytoplasm, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0005829 - cytosol, GO:0051179 - localization","TO:0000621 - inflorescence development trait, TO:0002676 - brassinosteroid content, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield","PO:0000034 - vascular system , PO:0025477 - floral organ primordium , PO:0009038 - palea , PO:0000229 - flower meristem , PO:0001083 - inflorescence development stage , PO:0009037 - lemma , PO:0020141 - stem node , PO:0006327 - spikelet meristem , PO:0025127 - primordium ","Os08g0562500","LOC_Os08g44840.1",{"$nulls":7},"_","OsRFPHC-14, OsSTA9","_","RING finger protein OsRFPHC-14, RING-HC protein 14",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008270 - zinc ion binding, GO:0005634 - nucleus, GO:0005739 - mitochondrion, GO:0004842 - ubiquitin-protein ligase activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0007275 - multicellular organismal development","TO:0000168 - abiotic stress trait","PO:0009066 - anther ","Os01g0234900","LOC_Os01g13370.1",{"$nulls":6},"qDOR-6-1","qDOR-6-1","seed dormancy (QTL)-6-1","seed dormancy (QTL)-6-1",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"DRAP2","OsDrAp2, DrAp2, OsHAPL1, HAPL1, DLN150, OsDLN150","DR1 ASSOCIATED PROTEIN 2","Dr1-associated protein2, eukaryotic general repressor DrAp2, Heme Activator Protein like 1, DLN repressor 150, DLN motif protein 150",5," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0048573 - photoperiodism, flowering, GO:0005634 - nucleus, GO:0005515 - protein binding, GO:2000028 - regulation of photoperiodism, flowering, GO:0016564 - transcription repressor activity, GO:0009648 - photoperiodism, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0043565 - sequence-specific DNA binding","TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000382 - 1000-seed weight, TO:0000447 - filled grain number, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000040 - panicle length, TO:0000346 - tiller number","PO:0025034 - leaf ","Os05g0494100","LOC_Os05g41450.1","Os01g0839200","Os02g0646200","Os01g0283700",3.307972,0,null,"MADS51","OsMADS51, OsMADS65, MADS65, qHd1, DLN36, OsDLN36","MADS BOX GENE 51","MADS box gene51, DLN repressor 36, DLN motif protein 36",1," Reproductive organ - Heading date,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0006350 - transcription, GO:0003700 - transcription factor activity","TO:0002616 - flowering time, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000303 - cold tolerance, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0000432 - temperature response trait",null,"Os01g0922800","LOC_Os01g69850.1"]
[{"$nulls":23},"Os06g0679500","Os01g0706700","Os01g0176200","Os01g0176200",-2.2107944,-1.3799456,null,"Os01g0127200",3.924364,"Os11g0704500",-1.3823608,{"$nulls":29},"LPL2",null,"LESS PRONOUNCED LOBE EPIDERMAL CELL 2","less pronounced lobe epidermal cell2, PIROGI/Specifically Rac1-associated protein 1 (PIR/SRA1)-like protein",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle","GO:0007015 - actin filament organization, GO:0045010 - actin nucleation, GO:0045604 - regulation of epidermal cell differentiation","TO:0000227 - root length, TO:0000207 - plant height, TO:0000566 - stomatal frequency, TO:0000040 - panicle length",null,"Os03g0143800","LOC_Os03g05020.1",{"$nulls":7},"_","OsVIL3, OsVIL4, VIL1","_","VIN3-LIKE 3, VERNALIZATION INSENSITIVE 3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1",5," Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development",null,"PO:0007615 - flower development stage ","Os05g0145400","LOC_Os05g05310.1, LOC_Os05g05310.2",{"$nulls":6},"qDOR-6-2","qDOR-6-2","seed dormancy (QTL)-6-2","seed dormancy (QTL)-6-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"DEP1","OsDEP1, EP, qPE9-1, DN1, DEP1/DN1/qPE9-1, qNGR9, qDEP1, RGG4/DEP1/DN1/qPE9-1/OsGGC3, RGG4, OsDN1, OsGGC3, GGC3","DENSE AND ERECT PANICLE 1","dense and erect panicle 1, erect-pose panicle, DENSE PANICLE 1, DENSE AND ERECT PANICLE1, DENSE AND ERECT PANICLES 1, G gamma subunit DEP1, Heterotrimeric G Protein gamma4 Subunit",9," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0048573 - photoperiodism, flowering, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009651 - response to salt stress, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005882 - intermediate filament","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000137 - days to heading, TO:0000050 - inflorescence branching, TO:0000397 - grain size, TO:0002759 - grain number, TO:0000456 - spikelet number",null,"Os09g0441900","LOC_Os09g26999.3, LOC_Os09g26999.2, LOC_Os09g26999.1","Os05g0382900","Os03g0150200","Os07g0282300",3.2917912,0,null,"SDT","miR156h, OsmiR156h, osmiR156h, osa-miR156h, osa-MIR156hosa-miR156h-3p osa-miR156h-5p","SEMIDWARF AND HIGH-TILLERING","micro RNA 156h, microRNA156h, osa-miRNA156h, semidwarf and high-tillering",6," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000068 - lodging incidence, TO:0000207 - plant height","PO:0000009 - cultured plant callus , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009049 - inflorescence "]
[{"$nulls":23},"Os06g0683300","Os07g0634900","Os09g0511700","Os09g0511700",-2.5701876,-1.4125928,null,"Os03g0414900",3.923582,"Os01g0176200",-1.3799456,{"$nulls":29},"LPL3","OsLPL3, DS8, OsDS8","LESS PRONOUNCED LOBE EPIDERMAL CELL 3","less pronounced lobe epidermal cell3, NCK-associated protein 1 (NAP1)-like protein, drought sensitive 8",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0007015 - actin filament organization, GO:0045010 - actin nucleation, GO:0045604 - regulation of epidermal cell differentiation, GO:0042335 - cuticle development, GO:0009738 - abscisic acid mediated signaling","TO:0000420 - fertility related trait, TO:0000276 - drought tolerance, TO:0000566 - stomatal frequency, TO:0000520 - stomatal closure rate, TO:0002667 - abscisic acid content, TO:0000207 - plant height",null,"Os08g0544500","LOC_Os08g43130.1",{"$nulls":7},"TDD1","OsTDD1, ASB1, OASB1, OsASbeta1, ASbeta1, TDD1/OASB1","TRYPTOPHAN DEFICIENT DWARF 1","anthranilate synthase beta subunit 1, Anthranilate synthase beta 1 subunit, tryptophan deficient dwarf",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009851 - auxin biosynthetic process, GO:0009790 - embryonic development, GO:0000162 - tryptophan biosynthetic process, GO:0009848 - indoleacetic acid biosynthetic process via tryptophan, GO:0002213 - defense response to insect, GO:0009617 - response to bacterium, GO:0009507 - chloroplast, GO:0009411 - response to UV, GO:0009723 - response to ethylene stimulus","TO:0002674 - tryptophan content, TO:0000424 - brown planthopper resistance, TO:0000227 - root length, TO:0002672 - auxin content, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000064 - embryo related trait, TO:0000499 - flower anatomy and morphology trait, TO:0000160 - UV light sensitivity",null,"Os04g0463500","LOC_Os04g38950.1, LOC_Os04g38950.3, LOC_Os04g38950.2",{"$nulls":6},"qDOR-8","qDOR-8","seed dormancy (QTL)-8","seed dormancy (QTL)-8",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP1;2","OsPIP1;2, PIP1-2, OsPIP1-2","PLASMA MEMBRANE INTRINSIC PROTEIN 1;2","Probable aquaporin PIP1-2, Plasma membrane intrinsic protein 1-2",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005215 - transporter activity, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0055085 - transmembrane transport, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0034021 - response to silicon dioxide, GO:0015770 - sucrose transport, GO:0010037 - response to carbon dioxide, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0009915 - phloem loading","TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000291 - carbohydrate content, TO:0006001 - salt tolerance, TO:0000394 - drought related trait, TO:0000396 - grain yield, TO:0000615 - abscisic acid sensitivity","PO:0000003 - whole plant , PO:0009005 - root , PO:0025034 - leaf , PO:0004006 - mesophyll cell ","Os04g0559700","LOC_Os04g47220.1","Os03g0267300","Os02g0187800","Os07g0673400",3.278506,0,null,"ESL4","CDPK12, OsCDPK12, OsCPK12, CPK12, OsESL4","EARLY SENESCENCE LEAF 4","calcium-dependent protein kinase, Calcium-dependent protein kinase 12, Early senescence leaf 4",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009627 - systemic acquired resistance, GO:0006807 - nitrogen compound metabolic process, GO:0010150 - leaf senescence, GO:0009697 - salicylic acid biosynthetic process, GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000455 - seed set percent, TO:0000271 - inflorescence length, TO:0000440 - grain number per plant, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence","PO:0007633 - endosperm development stage ","Os04g0560600","LOC_Os04g47300.1"]
[{"$nulls":23},"Os07g0176900","Os02g0635000","Os01g0773600","Os01g0773600",-1.4247409,-1.3841864,null,"Os06g0193300",3.920268,"Os01g0764900",-1.3786181,{"$nulls":29},"LC3","OsLC3","LEAF INCLINATION 3","LEAF INCLINATION3",6," Vegetative organ - Leaf","GO:0010252 - auxin homeostasis, GO:0006351 - transcription, DNA-dependent, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0051510 - regulation of unidimensional cell growth","TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending","PO:0025281 - pollen , PO:0009051 - spikelet , PO:0009010 - seed , PO:0009039 - glume ","Os06g0595900","LOC_Os06g39480.1",{"$nulls":7},"RAU1","OsLAX1, OsRAU1, OsAUX1, LAX1, AUX1","RELATED TO AUX1","like aux1-1, related to AUX1-1, auxin transporter 1",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0046685 - response to arsenic, GO:0009629 - response to gravity, GO:0048364 - root development, GO:0010031 - circumnutation, GO:0005886 - plasma membrane, GO:0006865 - amino acid transport, GO:0009734 - auxin mediated signaling pathway, GO:0015293 - symporter activity, GO:0048527 - lateral root development, GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0048449 - floral organ formation, GO:0009414 - response to water deprivation, GO:0010071 - root meristem specification, GO:0010311 - lateral root formation, GO:0010449 - root meristem growth, GO:0000302 - response to reactive oxygen species, GO:0042594 - response to starvation, GO:0010446 - response to alkalinity, GO:0009737 - response to abscisic acid stimulus, GO:0048829 - root cap development, GO:0016021 - integral to membrane, GO:0080022 - primary root development, GO:0048767 - root hair elongation, GO:0046686 - response to cadmium ion","TO:0002665 - root hair length, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000656 - root development trait, TO:0000346 - tiller number, TO:0002693 - gravity response trait, TO:0000163 - auxin sensitivity, TO:0000511 - phosphorus uptake, TO:0006022 - floral organ development trait, TO:0000615 - abscisic acid sensitivity, TO:0001012 - lateral root length, TO:0001013 - lateral root number, TO:0000227 - root length, TO:0000137 - days to heading, TO:0002672 - auxin content, TO:0006001 - salt tolerance, TO:0000145 - internode length","PO:0007520 - root development stage , PO:0001031 - 4 root elongation stage , PO:0025477 - floral organ primordium , PO:0004703 - carpel primordium , PO:0004705 - stamen primordium , PO:0007519 - 5 root hair formation stage , PO:0007600 - floral organ differentiation stage ","Os01g0856500","LOC_Os01g63770.2, LOC_Os01g63770.1",{"$nulls":6},"qDOR-9-1","qDOR-9-1","seed dormancy (QTL)-9-1","seed dormancy (QTL)-9-1",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP1;3","OsPIP1;3. PIP1.3, PIP1-3, RWC3, RWC-3, OsPIP1-3","PLASMA MEMBRANE INTRINSIC PROTEIN 1;3","Aquaporin PIP 1.3, Aquaporin PIP 1-3, Plasma membrane intrinsic protein 1-3, Water channel protein RWC3, Aquaporin RWC3",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006833 - water transport, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0010036 - response to boron, GO:0046713 - boron transport, GO:0042742 - defense response to bacterium, GO:0015250 - water channel activity, GO:0042128 - nitrate assimilation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0005215 - transporter activity, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0006950 - response to stress, GO:0006810 - transport","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0001017 - water use efficiency, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000457 - total biomass yield, TO:0000241 - leaf number, TO:0000442 - plant fresh weight, TO:0000357 - growth and development trait, TO:0001027 - net photosynthetic rate, TO:0000175 - bacterial blight disease resistance, TO:0000018 - boron sensitivity, TO:0000352 - plant dry weight","PO:0025034 - leaf , PO:0005059 - root endodermis , PO:0009005 - root ","Os02g0823100","LOC_Os02g57720.1","Os07g0573600","Os04g0613000","Os08g0443800",3.2659805,0,null,"GHD7","Ghd2, Ghd7, OsGhd7, OsCCT26, OsCMF8, OsI, Ghd7/Hd4, Hd4, EH7-1/Hd4, Ghd7-0a, EH7-1, EH7/Ghd7, EH7, OsEH7","HEADING DATE 7","heading date 7, \\Grain number, plant height, and heading date7\\\", \\\"GRAIN NUMBER, PLANT HEIGHT AND HEADING DATE 7\\\", CCT domain-containing gene 26, CCT (CO, CO-LIKE and TOC1) domain protein 26, CCT domain protein 26, CCT MOTIF FAMILY (CMF) gene 8, Early heading 7\"",7," Vegetative organ - Culm,  Reproductive organ - Heading date,  Heterochrony,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0009648 - photoperiodism, GO:0007623 - circadian rhythm","TO:0000137 - days to heading, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000050 - inflorescence branching, TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0000469 - days to maturity, TO:0000456 - spikelet number, TO:0000229 - photoperiod sensitivity, TO:0000207 - plant height",null,"Os07g0261200","LOC_Os07g15770.1"]
[{"$nulls":23},"Os07g0197100","Os03g0356300","Os04g0474500","Os04g0474500",3.6957576,3.0274389,null,"Os05g0448300",3.9182844,"Os11g0109900",-1.3773346,{"$nulls":29},"PGL1","OsPGL1","PALE GREEN LEAVES 1","Pale Green Leaves 1",12," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0008270 - zinc ion binding, GO:0009658 - chloroplast organization, GO:0009451 - RNA modification","TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os12g0163600","LOC_Os12g06650.1",{"$nulls":7},"MDR1","OsABCB15, ABCB15, OsPGP15, OsMDR1, OsMDR2, MDR2, OsSTA125","MULTIDRUG RESISTANCE 1","ABC transporter superfamily ABCB subgroup member 15, P-Glycoprotein 15, multidrug resistance 1",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010540 - basipetal auxin transport, GO:0010329 - auxin efflux transmembrane transporter activity, GO:0042626 - ATPase activity, coupled to transmembrane movement of substances, GO:0005524 - ATP binding, GO:0010541 - acropetal auxin transport, GO:0005886 - plasma membrane","TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009066 - anther ","Os04g0481700","LOC_Os04g40570.1",{"$nulls":6},"qDOR-9-2","qDOR-9-2","seed dormancy (QTL)-9-2","seed dormancy (QTL)-9-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP2;2","OsPIP2;2, PIP2-2, OsPIP2-3","PLASMA MEMBRANE INTRINSIC PROTEIN 2;2","Probable aquaporin PIP2-2, Plasma membrane intrinsic protein 2-2",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0005215 - transporter activity, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0034021 - response to silicon dioxide, GO:0055085 - transmembrane transport, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0046686 - response to cadmium ion, GO:0006833 - water transport, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0006002 - proline content","PO:0025034 - leaf ","Os02g0629200","LOC_Os02g41860.2, LOC_Os02g41860.1, LOC_Os02g41860.4, LOC_Os02g41860.3","Os01g0284500","Os05g0373300","Os10g0390500",3.2548683,0,null,"GIF1","gif1, CIN2, OsCIN2, OsGIF1, WB1, OsWB1, GIF1/OsCIN2","GRAIN  INCOMPLETE FILLING 1","grain incomplete filling 1, \\Beta-fructofuranosidase, insoluble isoenzyme 2\\\", Sucrose hydrolase 2, Invertase 2, Cell wall beta-fructosidase 2, cell-wall invertase 2, White Belly 1\"",4," Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste,  Character as QTL - Yield and productivity","GO:0009960 - endosperm development, GO:0016787 - hydrolase activity, GO:0005987 - sucrose catabolic process, GO:0005975 - carbohydrate metabolic process, GO:0005618 - cell wall, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005986 - sucrose biosynthetic process, GO:0048046 - apoplast, GO:0004575 - sucrose alpha-glucosidase activity, GO:0004564 - beta-fructofuranosidase activity","TO:0000304 - seed thickness, TO:0000456 - spikelet number, TO:0000447 - filled grain number, TO:0000328 - sucrose content, TO:0002661 - seed maturation, TO:0000391 - seed size, TO:0000300 - glucose content, TO:0000311 - invertase activity, TO:0000196 - amylose content, TO:0000455 - seed set percent, TO:0000590 - grain weight, TO:0000097 - amylopectin content, TO:0006005 - fructose content, TO:0000221 - glume color, TO:0002656 - starch grain shape, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000396 - grain yield, TO:0000487 - endosperm color, TO:0000575 - endosperm related trait, TO:0000266 - chalky endosperm, TO:0000696 - starch content, TO:0000592 - 1000-dehulled grain weight, TO:0000162 - seed quality","PO:0000025 - root tip , PO:0005019 - carpel vascular system , PO:0006326 - inflorescence internode , PO:0009084 - pericarp , PO:0009089 - endosperm , PO:0007633 - endosperm development stage ","Os04g0413500","LOC_Os04g33740.1"]
[{"$nulls":23},"Os07g0209000","Os05g0103200","Os01g0875500","Os01g0875500",4.8743377,3.2286427,null,"Os10g0531900",3.9181435,"Os03g0643300",-1.3771795,{"$nulls":29},"RLI1","OsRLI1, RLI1/HINGE1, HINGE1, OsHINGE1","REGULATOR OF LEAF INCLINATION1 ","REGULATOR OF LEAF INCLINATION 1, Highly Induced by Nitrate Gene 1",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006794 - phosphorus utilization, GO:0019740 - nitrogen utilization, GO:0010167 - response to nitrate, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0042126 - nitrate metabolic process, GO:0006796 - phosphate metabolic process, GO:0051510 - regulation of unidimensional cell growth, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0000102 - phosphorus sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle","PO:0009049 - inflorescence , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0003011 - root vascular system , PO:0006036 - root epidermis ","Os04g0665600","LOC_Os04g56990.3, LOC_Os04g56990.2, LOC_Os04g56990.1",{"$nulls":7},"ABCG15","OsABCG15, PDA, PDA1, OsABCG15/PDA1","ABC TRANSPORTER G FAMILY MEMBER 15","ABC transporter superfamily ABCG subgroup member 15, post-meiotic deficient anther1, Postmeiotic Deficient Anther1, ATP binding cassette G15, ATP binding cassette subfamily G 15",6," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016887 - ATPase activity, GO:0006869 - lipid transport, GO:0048653 - anther development, GO:0009555 - pollen development, GO:0010584 - pollen exine formation, GO:0006200 - ATP catabolic process, GO:0005524 - ATP binding, GO:0005886 - plasma membrane","TO:0000531 - anther length, TO:0000437 - male sterility, TO:0000187 - anther color, TO:0000245 - pollen free, TO:0000215 - stamen anatomy and morphology trait","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0025313 - tapetum ","Os06g0607700","LOC_Os06g40550.1",{"$nulls":6},"qDOR-11-1","qDOR-11-1","seed dormancy (QTL)-11-1","seed dormancy (QTL)-11-1",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP2;4","OsPIP2;4, PIP2.4, PIP2-4, OsPIP2-4","PLASMA MEMBRANE INTRINSIC PROTEIN 2;4","Aquaporin PIP2.4, Aquaporin PIP2-4, Plasma membrane intrinsic protein 2-4",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006833 - water transport, GO:0016021 - integral to membrane, GO:0006970 - response to osmotic stress, GO:0016020 - membrane, GO:0034021 - response to silicon dioxide, GO:0009414 - response to water deprivation, GO:0046685 - response to arsenic, GO:0046686 - response to cadmium ion, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0005886 - plasma membrane, GO:0005215 - transporter activity, GO:0009651 - response to salt stress, GO:0055085 - transmembrane transport","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance","PO:0025034 - leaf ","Os07g0448100","LOC_Os07g26630.1","Os11g0703900","Os09g0376800","Os08g0374000",3.2430859,0,null,"SAMDC","SamDC, AdoMetDC, AdoMetDC1, OsSAMDC1","S-ADENOSYLMETHIONINE DECARBOXYLASE","S-adenosylmethionine decarboxylase, S-adenosylmethionine decarboxylase proenzyme, S-adenosylmethionine decarboxylase alpha chain, S-adenosylmethionine decarboxylase beta chain, S-adenosylmethionine decarboxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0009555 - pollen development, GO:0006596 - polyamine biosynthetic process, GO:0016209 - antioxidant activity, GO:0009846 - pollen germination, GO:0008295 - spermidine biosynthetic process, GO:0006597 - spermine biosynthetic process, GO:0009409 - response to cold, GO:0004014 - adenosylmethionine decarboxylase activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0000303 - cold tolerance, TO:0000430 - germination rate, TO:0000421 - pollen fertility, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance",null,"Os04g0498600","LOC_Os04g42090.1, LOC_Os04g42090.2, LOC_Os04g42090.3, LOC_Os04g42090.4, LOC_Os04g42090.5, LOC_Os04g42095.1"]
[{"$nulls":23},"Os07g0424400","Os07g0176900","Os09g0533900","Os09g0533900",3.8545601,1.8041593,null,"Os11g0652100",3.9156723,"Os03g0110500",-1.3764087,{"$nulls":29},"WP3",null,"WHITE PANICLE 3","WHITE PANICLE3",1," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others","GO:0010027 - thylakoid membrane organization, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0009658 - chloroplast organization","TO:0002701 - lutein content, TO:0000326 - leaf color, TO:0000201 - panicle color, TO:0000069 - variegated leaf, TO:0002715 - chloroplast development trait, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000289 - carotene content","PO:0009046 - flower , PO:0000025 - root tip ","Os01g0306650","LOC_Os01g20100.1",{"$nulls":7},"ABCG16","OsABCG16, OsABCG16_1, OsABCG16_2, OsSTA183","ABC TRANSPORTER G FAMILY MEMBER 16","ABC transporter superfamily ABCG subgroup member 16",6," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0006200 - ATP catabolic process",null,"PO:0009066 - anther ","Os06g0731200","LOC_Os06g51460.1, LOC_Os06g51460.2",{"$nulls":6},"qDOR-11-2","qDOR-11-2","seed dormancy (QTL)-11-2","seed dormancy (QTL)-11-2",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP2;6","OsPIP2;6, PIP2-6, OsPIP2-5","PLASMA MEMBRANE INTRINSIC PROTEIN 2;6","Probable aquaporin PIP2-6, Plasma membrane intrinsic protein 2-6",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0005215 - transporter activity, GO:0009651 - response to salt stress, GO:0046685 - response to arsenic, GO:0010036 - response to boron, GO:0016021 - integral to membrane, GO:0009409 - response to cold, GO:0046686 - response to cadmium ion, GO:0034021 - response to silicon dioxide, GO:0009414 - response to water deprivation, GO:0055085 - transmembrane transport, GO:0009737 - response to abscisic acid stimulus, GO:0006970 - response to osmotic stress, GO:0046713 - boron transport","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000018 - boron sensitivity, TO:0000276 - drought tolerance","PO:0009005 - root ","Os04g0233400","LOC_Os04g16450.1","Os11g0660500","Os01g0648000","Os02g0811800",3.2202778,0,null,"AGPL2","OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2, GIF2, GAS1","ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 2","sativa ADP-glucose pyrophosphorylase large subunit 2, ADP-glucose Pyrophosphorylase large subunit 2, AGPase large subunit 2, AGPase large unit 2, ADP-glucose pyrophosphorylase subunit SH2, GRAIN INCOMPLETE FILLING 2",1," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005978 - glycogen biosynthetic process, GO:0009058 - biosynthetic process, GO:0009536 - plastid, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0010431 - seed maturation, GO:0048316 - seed development, GO:0016779 - nucleotidyltransferase activity, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0010581 - regulation of starch biosynthetic process","TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0006001 - salt tolerance, TO:0000104 - floury endosperm, TO:0000162 - seed quality, TO:0000653 - seed development trait, TO:0000696 - starch content, TO:0000100 - shrunken endosperm","PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0009001 - fruit , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os01g0633100","LOC_Os01g44220.3, LOC_Os01g44220.4, LOC_Os01g44220.7, LOC_Os01g44220.6, LOC_Os01g44220.5, LOC_Os01g44220.1, LOC_Os01g44220.2"]
[{"$nulls":23},"Os07g0510200","Os05g0129200","Os01g0649900","Os01g0649900",5.566296,3.853714,null,"Os01g0186200",3.9119282,"Os07g0227600",-1.3763108,{"$nulls":29},"ZL16 ","OsHAD1, HAD1","ZEBRA LEAF 16","zebra leaf 16, Beta-hydroxyacyl-ACP dehydrate 1",8," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others","GO:0006633 - fatty acid biosynthetic process, GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0005737 - cytoplasm, GO:0016836 - hydro-lyase activity","TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000069 - variegated leaf","PO:0025034 - leaf ","Os08g0225000","LOC_Os08g12840.1",{"$nulls":7},"ABCG26","OsABCG26","ABC TRANSPORTER G FAMILY MEMBER 26","ABC transporter superfamily ABCG subgroup member 26, ATP binding cassette transporter G26, ATP Binding Cassette G26",10," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080051 - cutin transport, GO:0006200 - ATP catabolic process, GO:0006869 - lipid transport, GO:0009897 - external side of plasma membrane, GO:0010584 - pollen exine formation, GO:0005886 - plasma membrane, GO:0016887 - ATPase activity, GO:0009875 - pollen-pistil interaction, GO:0005524 - ATP binding, GO:0048653 - anther development","TO:0000437 - male sterility","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0009066 - anther , PO:0009029 - stamen , PO:0000002 - anther wall ","Os10g0494300","LOC_Os10g35180.1",{"$nulls":6},"qDOR-11-3","qDOR-11-3","seed dormancy (QTL)-11-3","seed dormancy (QTL)-11-3",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP2;7","OsPIP2;7, PIP2.7, PIP2-7, OsPIP2-6","PLASMA MEMBRANE INTRINSIC PROTEIN 2;7","Probable aquaporin PIP2.7, Probable aquaporin PIP2-7, Plasma membrane intrinsic protein 2-7",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0009651 - response to salt stress, GO:0055085 - transmembrane transport, GO:0005886 - plasma membrane, GO:0005215 - transporter activity, GO:0006970 - response to osmotic stress, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold","TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance",null,"Os09g0541000","LOC_Os09g36930.1","Os08g0162800","Os01g0286600","Os05g0589700",3.202921,0,null,"AGO17","OsAGO17","ARGONAUTE 17","Protein argonaute 17",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0051512 - positive regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0031047 - gene silencing by RNA, GO:0003676 - nucleic acid binding, GO:0005739 - mitochondrion","TO:0000449 - grain yield per plant, TO:0000391 - seed size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000266 - chalky endosperm, TO:0000455 - seed set percent, TO:0000456 - spikelet number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000590 - grain weight","PO:0020141 - stem node ","Os02g0169400","LOC_Os02g07310.1"]
[{"$nulls":23},"Os07g0539100","Os09g0510500","Os01g0827700","Os01g0827700",3.7598455,2.7648027,null,"Os04g0445000",3.909005,"Os09g0400500",-1.3753079,{"$nulls":29},"TCM1","OsTCM1","THERMOSENSITIVE CHLOROPHYLL-DEFICIENT MUTANT 1","thermosensitive chlorophyll-deficient mutant 1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0009507 - chloroplast, GO:0009416 - response to light stimulus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009658 - chloroplast organization, GO:0009508 - plastid chromosome, GO:0042793 - transcription from plastid promoter","TO:0000303 - cold tolerance, TO:0000293 - chlorophyll-a content, TO:0000326 - leaf color, TO:0000295 - chlorophyll-b content, TO:0002715 - chloroplast development trait",null,"Os01g0769900","LOC_Os01g56350.1, LOC_Os01g56350.2, LOC_Os01g56350.3",{"$nulls":7},"ABCG28","OsABCG28, OsSTA255","ABC TRANSPORTER G FAMILY MEMBER 28","ABC transporter superfamily ABCG subgroup member 28",11," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006200 - ATP catabolic process, GO:0016887 - ATPase activity, GO:0005886 - plasma membrane, GO:0005524 - ATP binding",null,"PO:0009066 - anther ","Os11g0416900","LOC_Os11g22350.1",{"$nulls":6},"qDOR-11-4","qDOR-11-4","seed dormancy (QTL)-11-4","seed dormancy (QTL)-11-4",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"PIP2;8","OsPIP2;8, PIP2.8, PIP2-8, OsPIP2-7","PLASMA MEMBRANE INTRINSIC PROTEIN 2;8","Probable aquaporin PIP2.8, Probable aquaporin PIP2-8, Plasma membrane intrinsic protein 2-8",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0005215 - transporter activity, GO:0006970 - response to osmotic stress, GO:0055085 - transmembrane transport, GO:0009737 - response to abscisic acid stimulus","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance",null,"Os03g0861300","LOC_Os03g64330.1","Os01g0639900","Os05g0595000","Os07g0208500",3.1906679,0,null,"DCL3B","OsDCL3b","DICER-LIKE 3B","Endoribonuclease Dicer homolog 3b, Dicer-like protein 3b",10," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0030145 - manganese ion binding, GO:0000287 - magnesium ion binding, GO:0004525 - ribonuclease III activity, GO:0005524 - ATP binding, GO:0031047 - gene silencing by RNA, GO:0003725 - double-stranded RNA binding, GO:0005634 - nucleus, GO:0006396 - RNA processing, GO:0008026 - ATP-dependent helicase activity, GO:0000380 - alternative nuclear mRNA splicing, via spliceosome","TO:0000396 - grain yield, TO:0002673 - amino acid content, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000421 - pollen fertility, TO:0000162 - seed quality, TO:0000598 - protein content",null,"Os10g0485600","LOC_Os10g34430.1"]
[{"$nulls":23},"Os07g0552800","Os06g0254700","Os06g0725200","Os06g0725200",2.8921776,3.7445822,null,"Os02g0585100",3.905257,"Os04g0652400",-1.3742207,{"$nulls":29},"GATA7","OsGATA7","GATA TRANSCRIPTION FACTOR 7","GATA transcription factor 7, GATA factor 7",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Other","GO:0009741 - response to brassinosteroid stimulus, GO:0003682 - chromatin binding, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0005667 - transcription factor complex, GO:0006366 - transcription from RNA polymerase II promoter, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0030154 - cell differentiation","TO:0000207 - plant height, TO:0000227 - root length, TO:0002730 - grain shape, TO:0000206 - leaf angle, TO:0000547 - primary branch number, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0002677 - brassinosteroid sensitivity","PO:0009029 - stamen , PO:0020142 - stem internode , PO:0009037 - lemma , PO:0009005 - root , PO:0025034 - leaf ","Os10g0557600 ","LOC_Os10g40810.1",{"$nulls":7},"OAT","OsOAT, delta-OAT","ORNITHINE DELTA-AMINOTRANSFERASE","ornithine delta-aminotransferase, ornithine aminotransferase",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006593 - ornithine catabolic process, GO:0009741 - response to brassinosteroid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0019544 - arginine catabolic process to glutamate, GO:0030170 - pyridoxal phosphate binding, GO:0042538 - hyperosmotic salinity response, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0006979 - response to oxidative stress, GO:0005759 - mitochondrial matrix, GO:0004587 - ornithine-oxo-acid transaminase activity, GO:0008270 - zinc ion binding, GO:0009856 - pollination, GO:0009901 - anther dehiscence, GO:0009908 - flower development, GO:0006561 - proline biosynthetic process, GO:0009414 - response to water deprivation, GO:0009413 - response to flooding","TO:0000095 - osmotic response sensitivity, TO:0000622 - flower development trait, TO:0006002 - proline content, TO:0002673 - amino acid content, TO:0020034 - glume width, TO:0000180 - spikelet fertility, TO:0000474 - glume opening, TO:0020033 - glume length, TO:0000484 - seed shape","PO:0007615 - flower development stage ","Os03g0643300","LOC_Os03g44150.1",{"$nulls":6},"qDOR-11-5","qDOR-11-5","seed dormancy (QTL)-11-5","seed dormancy (QTL)-11-5",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"NIP1;1","OsNIP1;1, NIP1-1, rMIP1, MIP1, OsNIP1.1, NIP1.1","NOD26 LIKE INTRINSIC PROTEIN 1;1","Aquaporin NIP1-1, NOD26-like intrinsic protein 1-1, rice Mip 1, major intrinsic protein 1, Nodulin 26",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0006810 - transport","TO:0000021 - copper sensitivity","PO:0020141 - stem node , PO:0009005 - root , PO:0009051 - spikelet , PO:0008039 - stem base ","Os02g0232900","LOC_Os02g13870.1","Os02g0562700","Os01g0357100","Os07g0184800",3.1617622,0,null,"CKX9","OsCKX9","CYTOKININ  OXIDASE/DEHYDROGENASE 9","cytokinin oxidase 9",5," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0005634 - nucleus, GO:0009823 - cytokinin catabolic process, GO:0005615 - extracellular space, GO:0019139 - cytokinin dehydrogenase activity, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0009690 - cytokinin metabolic process, GO:0050660 - FAD binding, GO:0009725 - response to hormone stimulus, GO:0009733 - response to auxin stimulus, GO:0005829 - cytosol","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000582 - inflorescence number, TO:0000547 - primary branch number, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity",null,"Os05g0374200","LOC_Os05g31040.1"]
[{"$nulls":23},"Os07g0630800","Os02g0562700","Os03g0581400","Os03g0581400",3.8535707,5.1556945,null,"Os03g0343800",3.9049225,"Os04g0111100",-1.3740374,{"$nulls":29},"GATA12","OsGATA12","GATA TRANSCRIPTION FACTOR 12","GATA transcription factor 12, GATA factor 12",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity,  Other","GO:0015996 - chlorophyll catabolic process, GO:0048364 - root development, GO:0048573 - photoperiodism, flowering, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0005667 - transcription factor complex, GO:0006366 - transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0009658 - chloroplast organization, GO:0010150 - leaf senescence, GO:0015995 - chlorophyll biosynthetic process, GO:0051301 - cell division","TO:0000128 - harvest index, TO:0000449 - grain yield per plant, TO:0000445 - seed number, TO:0000207 - plant height, TO:0000084 - root number, TO:0000227 - root length, TO:0000656 - root development trait, TO:0000340 - total soluble sugar content, TO:0000702 - starch concentration, TO:0002673 - amino acid content, TO:0002616 - flowering time, TO:0000241 - leaf number, TO:0000346 - tiller number, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content, TO:0000457 - total biomass yield, TO:0000344 - days to flower, TO:0000326 - leaf color, TO:0000371 - yield trait","PO:0001054 - 4 leaf senescence stage , PO:0001031 - 4 root elongation stage ","Os03g0831200","LOC_Os03g61570.1, LOC_Os03g61570.2",{"$nulls":7},"_","OsDjB9, OsSTA211","_","DnaJ domain protein B9",8," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006950 - response to stress, GO:0006457 - protein folding",null,"PO:0009066 - anther ","Os08g0374400","LOC_Os08g28700.1",{"$nulls":6},"qDOR-11-6","qDOR-11-6","seed dormancy (QTL)-11-6","seed dormancy (QTL)-11-6",null," Seed - Physiological traits - Dormancy",{"$nulls":11},"ASA","OsNIP3;1, NIP3;1, NIP3-1, OsNIP3.1, NIP3.1, OsASA","APICAL SPIKELET ABORTION","Aquaporin NIP3-1, NOD26-like intrinsic protein 3-1, nodulin 26-like intrinsic protein 3-1, apical spikelet abortion",10," Biochemical character,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048656 - tapetal layer formation, GO:0055085 - transmembrane transport, GO:0009556 - microsporogenesis, GO:0010036 - response to boron, GO:0009555 - pollen development, GO:0009536 - plastid, GO:0005215 - transporter activity, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0010337 - regulation of salicylic acid metabolic process, GO:0016020 - membrane, GO:0010229 - inflorescence development, GO:0016021 - integral to membrane","TO:0000346 - tiller number, TO:0000605 - hydrogen peroxide content, TO:0000421 - pollen fertility, TO:0006011 - lodicule shape, TO:0000210 - anther number, TO:0000187 - anther color, TO:0000621 - inflorescence development trait, TO:0000214 - anther shape, TO:0000614 - lemma shape, TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height","PO:0001007 - pollen development stage , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0009053 - peduncle , PO:0001083 - inflorescence development stage , PO:0005004 - shoot node , PO:0005352 - xylem , PO:0000074 - parenchyma cell ","Os10g0513200","LOC_Os10g36924.1","Os05g0476700","Os03g0122300","Os08g0280100",3.153022,0,null,"DEP1","OsDEP1, EP, qPE9-1, DN1, DEP1/DN1/qPE9-1, qNGR9, qDEP1, RGG4/DEP1/DN1/qPE9-1/OsGGC3, RGG4, OsDN1, OsGGC3, GGC3","DENSE AND ERECT PANICLE 1","dense and erect panicle 1, erect-pose panicle, DENSE PANICLE 1, DENSE AND ERECT PANICLE1, DENSE AND ERECT PANICLES 1, G gamma subunit DEP1, Heterotrimeric G Protein gamma4 Subunit",9," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0048573 - photoperiodism, flowering, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009651 - response to salt stress, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005882 - intermediate filament","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000137 - days to heading, TO:0000050 - inflorescence branching, TO:0000397 - grain size, TO:0002759 - grain number, TO:0000456 - spikelet number",null,"Os09g0441900","LOC_Os09g26999.3, LOC_Os09g26999.2, LOC_Os09g26999.1"]
[{"$nulls":23},"Os07g0669100","Os04g0555000","Os04g0577300","Os04g0577300",1.8517433,1.2343721,null,"Os02g0257300",3.904754,"Os02g0603600",-1.372179,{"$nulls":29},"_","SGL1","_","SG1-LIKE PROTEIN1, SG1-LIKE PROTEIN 1",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Reproductive organ - Panicle, Mode of branching","GO:0048316 - seed development, GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus","TO:0000653 - seed development trait, TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0000625 - spikelet density, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000089 - panicle type, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage , PO:0001170 - seed development stage ","Os02g0762600","LOC_Os02g52490.1, LOC_Os02g52490.2",{"$nulls":7},"_","Orysa;CKL1, OsSTA287","_","CDK-LIKE 1, cyclin-dependent kinase-like 1",12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding",null,"PO:0009066 - anther ","Os12g0577700","LOC_Os12g38860.1",{"$nulls":6},"GEL","gel(t), gel","GELATINISATION","gelatinisation (t), gelatinisation, gelatinization-behavior",6," Seed - Physiological traits - Storage substances","GO:0016051 - carbohydrate biosynthetic process","TO:0000462 - gelatinization temperature","PO:0009010 - seed ",{"$nulls":8},"NIP3;2","OsNIP3;2, NIP3-2, OsNIP3.2, NIP3.2","NOD26 LIKE INTRINSIC PROTEIN 3;2","Aquaporin NIP3-2, NOD26-like intrinsic protein 3-2",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005215 - transporter activity, GO:0006810 - transport, GO:0016021 - integral to membrane, GO:0046685 - response to arsenic, GO:0015104 - antimonite transmembrane transporter activity, GO:0005886 - plasma membrane",null,null,"Os08g0152000","LOC_Os08g05590.1","Os05g0261700","Os03g0386500","Os02g0813600",3.1383317,0,null,"DLT","dlt, OsGRAS32, OsDLT, OsDLT1, DTL1, OsGRAS-32, OsGRAS32, GRAS-32, GRAS32, SMOS2/DLT, SMOS2, OsSMOS2","DWARF AND LOW-TILLERING","GRAS protein 32, SMALL ORGAN SIZE 2",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0008283 - cell proliferation, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling","TO:0002601 - stamen size, TO:0000329 - tillering ability, TO:0001035 - stem width, TO:0000326 - leaf color, TO:0000227 - root length, TO:0000206 - leaf angle, TO:0002637 - leaf size, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0002677 - brassinosteroid sensitivity, TO:0002684 - plant cell size, TO:0000346 - tiller number, TO:0002602 - pistil size, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending",null,"Os06g0127800","LOC_Os06g03710.1"]
[{"$nulls":23},"Os07g0679300","Os12g0119000","Os02g0669000","Os02g0669000",3.4573658,1.3259596,null,"Os11g0701200",3.901984,"Os03g0246050",-1.3678669,{"$nulls":29},"SRL1","OsSRL1, CLD1/SRL1, CLD1, OsCLD1, OsSPARK9, SPARK9","SEMI-ROLLED LEAF 1","SEMI-ROLLED LEAF1, curled leaf and dwarf 1, SIMILAR PROTEIN TO ARK 9",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0005634 - nucleus, GO:0009751 - response to salicylic acid stimulus, GO:0009635 - response to herbicide, GO:0009733 - response to auxin stimulus, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009832 - plant-type cell wall biogenesis, GO:0030104 - water homeostasis, GO:0009414 - response to water deprivation, GO:0042335 - cuticle development, GO:0005886 - plasma membrane, GO:0009506 - plasmodesma, GO:0046658 - anchored to plasma membrane","TO:0000040 - panicle length, TO:0000058 - herbicide sensitivity, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000131 - leaf water potential, TO:0000293 - chlorophyll-a content, TO:0000136 - relative water content, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000085 - leaf rolling, TO:0000206 - leaf angle, TO:0002681 - leaf curling, TO:0000295 - chlorophyll-b content, TO:0000259 - heat tolerance, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000145 - internode length, TO:0000731 - lignin content","PO:0004001 - bulliform cell , PO:0001050 - leaf development stage ","Os07g0102300 ","LOC_Os07g01240.1, LOC_Os07g01240.2",{"$nulls":7},"_","Orysa;CKL8, OsSTA277","_","CDK-LIKE 8, cyclin-dependent kinase-like 8",12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004672 - protein kinase activity, GO:0005524 - ATP binding",null,"PO:0009066 - anther ","Os12g0203000","LOC_Os12g10190.1, LOC_Os12g10190.2",{"$nulls":6},"ACL","acl (t), acl(t), acl","AMYLOPECTIN CHAIN-LENGTH","amylopectin chain-length (t), amylopectin chain-length, amylopectin chain length",6," Seed - Physiological traits - Storage substances","GO:0019252 - starch biosynthetic process","TO:0000488 - seed composition based quality trait","PO:0009010 - seed ",{"$nulls":8},"MIR1425","OsmiR1425, miR1425, osa-miR1425, osa-MIR1425, osa-miR1425-3p, osa-miR1425-5p","MICRORNA1425","microRNA1425, osa-miRNA1425",5," Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0009737 - response to abscisic acid stimulus, GO:0019722 - calcium-mediated signaling, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os05g0245700",null,"Os12g0210400","Os05g0563400","Os01g0908600",3.1244538,0,null,"PIP1;2","OsPIP1;2, PIP1-2, OsPIP1-2","PLASMA MEMBRANE INTRINSIC PROTEIN 1;2","Probable aquaporin PIP1-2, Plasma membrane intrinsic protein 1-2",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005215 - transporter activity, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0055085 - transmembrane transport, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0034021 - response to silicon dioxide, GO:0015770 - sucrose transport, GO:0010037 - response to carbon dioxide, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0009915 - phloem loading","TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000291 - carbohydrate content, TO:0006001 - salt tolerance, TO:0000394 - drought related trait, TO:0000396 - grain yield, TO:0000615 - abscisic acid sensitivity","PO:0000003 - whole plant , PO:0009005 - root , PO:0025034 - leaf , PO:0004006 - mesophyll cell ","Os04g0559700","LOC_Os04g47220.1"]
[{"$nulls":23},"Os08g0116900","Os03g0337600","Os07g0586200","Os07g0586200",4.5226154,4.156663,null,"Os06g0118000",3.897976,"Os04g0665600",-1.3667952,{"$nulls":29},"PLS4","OsPLS4","PREMATURE LEAF SENESCENCE 4","3-Oxoacyl-[acyl-carrier-protein] reductase, Premature Leaf Senescence 4",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0016491 - oxidoreductase activity, GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process","TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000303 - cold tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0001027 - net photosynthetic rate, TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os04g0376300","LOC_Os04g30760.1",{"$nulls":7},"_","Orysa;Rb1, OsRBR1, RBR1, OsRBR2, RBR2","_","retinoblastoma protein homolog 1, etinoblastoma-related 1, retinoblastoma-related protein-2",11," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0048366 - leaf development, GO:0048655 - tapetal layer morphogenesis, GO:0009556 - microsporogenesis, GO:0045786 - negative regulation of cell cycle, GO:0009555 - pollen development, GO:0051726 - regulation of cell cycle, GO:0007049 - cell cycle, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048653 - anther development","TO:0000245 - pollen free, TO:0000218 - pollen abortion type, TO:0000485 - sterility related trait, TO:0000531 - anther length, TO:0000187 - anther color","PO:0009066 - anther , PO:0001050 - leaf development stage , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0009029 - stamen , PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os11g0533500","LOC_Os11g32900.1, LOC_Os11g32900.2",{"$nulls":6},"qSD-1","qSD-1","seed dormancy (QTL)-1","seed dormancy (QTL)-1",1," Seed - Physiological traits - Dormancy",{"$nulls":11},"MIR159A","miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2","MICRORNA159A",null,1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009555 - pollen development, GO:0035068 - micro-ribonucleoprotein complex, GO:0048316 - seed development, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0048443 - stamen development","TO:0000074 - blast disease, TO:0000734 - grain length, TO:0006032 - panicle size, TO:0000696 - starch content, TO:0000053 - pollen sterility, TO:0000187 - anther color, TO:0000342 - panicle axis angle, TO:0000447 - filled grain number, TO:0000485 - sterility related trait, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000371 - yield trait","PO:0001170 - seed development stage , PO:0001007 - pollen development stage ","Os01g0507000","LOC_Os01g32259.1","Os01g0757500","Os02g0178800","Os07g0694400",3.114006,0,null,"PIP1;3","OsPIP1;3. PIP1.3, PIP1-3, RWC3, RWC-3, OsPIP1-3","PLASMA MEMBRANE INTRINSIC PROTEIN 1;3","Aquaporin PIP 1.3, Aquaporin PIP 1-3, Plasma membrane intrinsic protein 1-3, Water channel protein RWC3, Aquaporin RWC3",2," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006833 - water transport, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0010036 - response to boron, GO:0046713 - boron transport, GO:0042742 - defense response to bacterium, GO:0015250 - water channel activity, GO:0042128 - nitrate assimilation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0005215 - transporter activity, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0006950 - response to stress, GO:0006810 - transport","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0001017 - water use efficiency, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000457 - total biomass yield, TO:0000241 - leaf number, TO:0000442 - plant fresh weight, TO:0000357 - growth and development trait, TO:0001027 - net photosynthetic rate, TO:0000175 - bacterial blight disease resistance, TO:0000018 - boron sensitivity, TO:0000352 - plant dry weight","PO:0025034 - leaf , PO:0005059 - root endodermis , PO:0009005 - root ","Os02g0823100","LOC_Os02g57720.1"]
[{"$nulls":23},"Os08g0126300","Os01g0633100","Os06g0149100","Os06g0149100",3.7512996,4.7206635,null,"Os11g0249400",3.8962889,"Os01g0859200",-1.366763,{"$nulls":29},"NCA1A","OsCOIN, COIN, OsNCA1a, NCA1a","NO CATALASE ACTIVITY 1A","cold-inducible, cold-inducible zinc finger protein",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0008270 - zinc ion binding, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress","TO:0006002 - proline content, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0025034 - leaf ","Os01g0104100 ","LOC_Os01g01420.3, LOC_Os01g01420.1, LOC_Os01g01420.2",{"$nulls":7},"PIS1","Orysa;Rb2, RBR2, OsRBR1, RBR1, OsPIS1","PANICLE IN SPIKELET 1","retinoblastoma protein homolog 2, etinoblastoma-related 2, retinoblastoma-related protein-1, panicle in spikelet1",8," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0045786 - negative regulation of cell cycle, GO:0010076 - maintenance of floral meristem identity, GO:0048437 - floral organ development, GO:0048444 - floral organ morphogenesis, GO:0007049 - cell cycle, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010582 - floral meristem determinacy, GO:0051726 - regulation of cell cycle, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent","TO:0006009 - lodicule anatomy and morphology trait, TO:0000223 - pistil anatomy and morphology trait, TO:0000474 - glume opening, TO:0000657 - spikelet anatomy and morphology trait, TO:0000215 - stamen anatomy and morphology trait","PO:0025477 - floral organ primordium , PO:0009030 - carpel , PO:0009036 - lodicule , PO:0009038 - palea , PO:0009037 - lemma , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0000229 - flower meristem ","Os08g0538700","LOC_Os08g42600.1, LOC_Os08g42600.2",{"$nulls":6},"qSD-3","qSD-3","seed dormancy (QTL)-3","seed dormancy (QTL)-3",3," Seed - Physiological traits - Dormancy",{"$nulls":11},"miR827","miR827a, OsmiR827a, miR827, osa-miR827, osa-MIR827, OsMiR827, miR827b, osa-miR827b, osa-MIR827b","MICRORNA827","MICRORNA827a, MICRORNA827b, osa-miRNA827b",2," Tolerance and resistance - Stress tolerance,  Other","GO:0016442 - RNA-induced silencing complex, GO:0016036 - cellular response to phosphate starvation, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage",{"$nulls":4},"Os12g0101800","Os11g0116300","Os12g0191500",3.1132698,0,null,"MIR159A","miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2","MICRORNA159A",null,1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009555 - pollen development, GO:0035068 - micro-ribonucleoprotein complex, GO:0048316 - seed development, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0048443 - stamen development","TO:0000074 - blast disease, TO:0000734 - grain length, TO:0006032 - panicle size, TO:0000696 - starch content, TO:0000053 - pollen sterility, TO:0000187 - anther color, TO:0000342 - panicle axis angle, TO:0000447 - filled grain number, TO:0000485 - sterility related trait, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000371 - yield trait","PO:0001170 - seed development stage , PO:0001007 - pollen development stage ","Os01g0507000","LOC_Os01g32259.1"]
[{"$nulls":23},"Os08g0160500","Os07g0156200","Os01g0329900","Os01g0329900",4.481261,3.9643126,null,"Os03g0736300",3.8959491,"Os01g0210200",-1.366676,{"$nulls":29},"ST2","ALR, OsDCD, DCD","STRIPE 2 ","STRIPE2, albinic leaf and growth retardation, dCMP deaminase",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0009658 - chloroplast organization, GO:0008284 - positive regulation of cell proliferation, GO:0045787 - positive regulation of cell cycle, GO:0006281 - DNA repair, GO:0004132 - dCMP deaminase activity, GO:0005739 - mitochondrion, GO:0016787 - hydrolase activity, GO:0010027 - thylakoid membrane organization, GO:0015995 - chlorophyll biosynthetic process, GO:0008270 - zinc ion binding, GO:0010020 - chloroplast fission","TO:0002715 - chloroplast development trait, TO:0000391 - seed size, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0000069 - variegated leaf",null,"Os01g0765000","LOC_Os01g55974.1, LOC_Os01g55974.2, LOC_Os01g55974.3",{"$nulls":7},"SMG2","YDA1, OsMKKK10, MKKK10, SMG2/OsMKKK10, OsSMG2, OsMAPKKK10, MAPKKK10","SMALL GRAIN 2","YODA 1, OsYODA-2, YODA-2, MAPK kinase kinase 10, small grain 2",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042127 - regulation of cell proliferation, GO:0010103 - stomatal complex morphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009793 - embryonic development ending in seed dormancy, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0080036 - regulation of cytokinin mediated signaling","TO:0002660 - cytokinin content, TO:0000590 - grain weight, TO:0002677 - brassinosteroid sensitivity, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os04g0559800 ","LOC_Os04g47240.3, LOC_Os04g47240.2, LOC_Os04g47240.1",{"$nulls":6},"qSD-5","qSD-5","seed dormancy (QTL)-5","seed dormancy (QTL)-5",5," Seed - Physiological traits - Dormancy",{"$nulls":11},"GSL2","OsGSL2","BETA-1,3-GLUCANASE ACTIVITY 2","Oryza sativa callose synthase 2, callose synthase 2",1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0016021 - integral to membrane, GO:0052543 - callose deposition in cell wall, GO:0006075 - 1,3-beta-glucan biosynthetic process, GO:0000148 - 1,3-beta-glucan synthase complex, GO:0003843 - 1,3-beta-glucan synthase activity, GO:0002215 - defense response to nematode","TO:0000384 - nematode damage resistance, TO:0000328 - sucrose content","PO:0009005 - root , PO:0025034 - leaf , PO:0009066 - anther ","Os01g0672500","LOC_Os01g48200.1","Os11g0657900","Os06g0234200","Os01g0659900",3.0577822,0,null," LIC","OsC3H46, C3H46, OsLIC","LEAF AND TILLER ANGLE INCREASED CONTROLLER","Zinc finger CCCH domain-containing protein 46, LEAF and TILLER ANGLE INCREASED CONTROLLER",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0008270 - zinc ion binding, GO:0009742 - brassinosteroid mediated signaling, GO:0005739 - mitochondrion, GO:0003677 - DNA binding","TO:0000567 - tiller angle, TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000445 - seed number, TO:0000207 - plant height, TO:0000206 - leaf angle",null,"Os06g0704300","LOC_Os06g49080.1"]
[{"$nulls":23},"Os08g0237000","Os01g0293900","Os01g0378100","Os01g0378100",5.3934464,2.9726746,null,"Os11g0503900",3.8892238,"Os07g0633300",-1.363359,{"$nulls":29},"URL1","ROC8, Roc8(t), Roc8, OsROC8, GL2-8, CRM1, OsCRM1, Os URL1","UPWARD ROLLED LEAF 1","Rice outmost cell -specific gene 8(t), Rice outermost cell-specific gene-8, Homeobox-leucine zipper protein ROC8, Homeodomain transcription factor ROC8, HD-ZIP protein ROC8, Protein RICE OUTERMOST CELL-SPECIFIC 8, GLABRA 2-like homeobox protein 8, Rice ooutmost cell-specific gene8, upward rolled leaf1",6," Vegetative organ - Leaf,  Other","GO:0043565 - sequence-specific DNA binding, GO:0008289 - lipid binding, GO:0009809 - lignin biosynthetic process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000731 - lignin content",null,"Os06g0208100","LOC_Os06g10600.1",{"$nulls":7},"EAT1","OsEAT1, OsbHLH141, EAT1/DTD1, bHLH141, DTD1, DTD, DLN120, OsDLN120","ETERNAL TAPETUM 1","ETERNAL TAPETUM1, basic helix-loop-helix protein 141, DELAYED TAPETUM DEGENERATION 1, delayed tapetum degeneration, DLN repressor 120, DLN motif protein 120",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009408 - response to heat, GO:0048657 - tapetal cell differentiation, GO:0009751 - response to salicylic acid stimulus, GO:0043067 - regulation of programmed cell death, GO:0048654 - anther morphogenesis, GO:0048653 - anther development, GO:0005634 - nucleus, GO:0010234 - tapetal cell fate specification, GO:0009555 - pollen development","TO:0000437 - male sterility, TO:0000259 - heat tolerance","PO:0009066 - anther , PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0009049 - inflorescence ","Os04g0599300","LOC_Os04g51070.1",{"$nulls":6},"qSD-7-1","qSD-7-1","seed dormancy (QTL)-7-1","seed dormancy (QTL)-7-1",7," Seed - Physiological traits - Dormancy",{"$nulls":11},"GSL5","OsGSL5, OsSTA170","BETA-1,3-GLUCANASE ACTIVITY 5","Oryza sativa callose synthase 5, callose synthase 5, Glucan Synthase-Like 5",6," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0000148 - 1,3-beta-glucan synthase complex, GO:0009409 - response to cold, GO:0006075 - 1,3-beta-glucan biosynthetic process, GO:0016021 - integral to membrane, GO:0003843 - 1,3-beta-glucan synthase activity","TO:0000303 - cold tolerance","PO:0009066 - anther ","Os06g0182300","LOC_Os06g08380.1","Os07g0614400","Os08g0439000","Os02g0730000",3.0123825,0,null,"ERF3","AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2, DLN23, OsDLN23","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 3","Apetela2 transcription factor 37, ethylene response factor 3, Ethylene responsive factor 3, ethylene response factor 75, APETALA2/ethylene-responsive element binding protein 4, benzothiadiazole (BTH)-induced ethylene responsive transcriptional factor 2, benzothiadiazole-induced ethylene responsive transcriptional factor 2, BTH-induced ethylene responsive transcriptional factor 2, ethylene-responsive element binding factor 3, APETALA37, DLN repressor 23, DLN motif protein 23",1," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009735 - response to cytokinin stimulus, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009873 - ethylene mediated signaling pathway, GO:0009414 - response to water deprivation, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009736 - cytokinin mediated signaling, GO:0009651 - response to salt stress, GO:0010366 - negative regulation of ethylene biosynthetic process, GO:0003677 - DNA binding","TO:0000371 - yield trait, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000276 - drought tolerance, TO:0000173 - ethylene sensitivity, TO:0000164 - stress trait, TO:0000167 - cytokinin sensitivity, TO:0006001 - salt tolerance","PO:0000043 - crown root , PO:0007518 - crown root emergence stage ","Os01g0797600","LOC_Os01g58420.1"]
[{"$nulls":23},"Os08g0345700","Os03g0603600","Os08g0238200","Os08g0238200",5.243205,5.3119807,null,"Os05g0178300",3.8853197,"Os07g0633200",-1.363359,{"$nulls":29},"_",null,"_","nallow and rolled leaf gene in KT95",null," Vegetative organ - Leaf","GO:0007275 - multicellular organismal development","TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000655 - leaf development trait","PO:0009025 - vascular leaf ",{"$nulls":9},"AP37 ","OsAP37","ASPARTIC PROTEASE 37","aspartic protease 37, E. coli cation transport protein ChaC homolog",4," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006508 - proteolysis, GO:0048653 - anther development, GO:0012501 - programmed cell death, GO:0004190 - aspartic-type endopeptidase activity","TO:0000432 - temperature response trait, TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os04g0448500","LOC_Os04g37570.1",{"$nulls":6},"qSD-11","qSD-11","seed dormancy (QTL)-11","seed dormancy (QTL)-11",11," Seed - Physiological traits - Dormancy",{"$nulls":11},"GSL8","OsGSL8, OsGSC, GSC, CRR1, OsCRR1","BETA-1,3-GLUCANASE ACTIVITY 8","Oryza sativa callose synthase 8, callose synthase 8, \\1, 3-beta-glucan synthase component\\\", cannot reach the roof 1\"",3," Biochemical character,  Tolerance and resistance","GO:0016021 - integral to membrane, GO:0006075 - 1,3-beta-glucan biosynthetic process, GO:0003843 - 1,3-beta-glucan synthase activity, GO:0052543 - callose deposition in cell wall, GO:0009832 - plant-type cell wall biogenesis, GO:0000148 - 1,3-beta-glucan synthase complex","TO:0000696 - starch content, TO:0000291 - carbohydrate content","PO:0009005 - root , PO:0009066 - anther , PO:0025034 - leaf , PO:0009015 - portion of vascular tissue , PO:0005020 - vascular bundle ","Os03g0119500",null,"Os06g0237502","Os03g0680800","Os03g0305400",2.9881618,0,null,"HD3B","Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3, ELF3_chr.6, OsELF3.1, ELF3.1","HEADING DATE 3B","HEADING DATE 17, EARLINESS 7, EARLY FLOWERING 3-1, EARLY FLOWERING3.1, EARLY FLOWERING 3.1, ELF3 homolog 1, Heading date from Qingluzhan 11, EARLY FLOWERING3",6," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0009648 - photoperiodism, GO:0007623 - circadian rhythm, GO:0048573 - photoperiodism, flowering","TO:0000137 - days to heading, TO:0000229 - photoperiod sensitivity, TO:0000249 - leaf senescence, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os06g0142600","LOC_Os06g05060.1"]
[{"$nulls":23},"Os08g0345800","Os03g0817100","Os01g0555800","Os01g0555800",1.8061792,2.7440684,null,"Os07g0634600",3.8824043,"Os01g0815400",-1.3619329,{"$nulls":29},"SRL2","NRL2, OsSRL2, OsNRL2","SEMI-ROLLED LEAF 2","semi-rolled leaf2, semi-rolled leaf 2, narrow and rolled leaf 2",3," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Grain shape","GO:0009834 - secondary cell wall biogenesis, GO:0009556 - microsporogenesis, GO:0009555 - pollen development, GO:0048366 - leaf development, GO:0006558 - L-phenylalanine metabolic process","TO:0000207 - plant height, TO:0000492 - leaf shape, TO:0002641 - acid detergent fiber, TO:0000455 - seed set percent, TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000149 - seed width, TO:0000391 - seed size, TO:0000430 - germination rate, TO:0000085 - leaf rolling","PO:0009066 - anther , PO:0005020 - vascular bundle , PO:0001050 - leaf development stage , PO:0006019 - leaf abaxial epidermis , PO:0025034 - leaf , PO:0009071 - anther wall tapetum , PO:0001007 - pollen development stage , PO:0001032 - E anther wall tapetum degeneration initiated stage , PO:0009005 - root , PO:0020104 - leaf sheath ","Os03g0308200","LOC_Os03g19520.3, LOC_Os03g19520.2, LOC_Os03g19520.1",{"$nulls":7},"GPX1","OsGpx1, GPX1, OsGPx01, OsGPX1","GLUTATHIONE PEROXIDASE 1","glutathione peroxidase 1",4," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004602 - glutathione peroxidase activity, GO:0005739 - mitochondrion, GO:0010332 - response to gamma radiation, GO:0045454 - cell redox homeostasis, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0010109 - regulation of photosynthesis, GO:0048364 - root development","TO:0000445 - seed number, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000656 - root development trait, TO:0000429 - salt sensitivity, TO:0000456 - spikelet number","PO:0007520 - root development stage ","Os04g0556300","LOC_Os04g46960.4, LOC_Os04g46960.3, LOC_Os04g46960.2, LOC_Os04g46960.1",{"$nulls":6},"qLG-2","qLG-2","seed longevity (QTL)-2","seed longevity (QTL)-2",2," Seed - Physiological traits - Longevity",{"$nulls":11},"HSFA1","OsHsfA1, HSFA1, OsHSF13, HSF13, OsHsf-13, HSF3, rHsf3, OsHsfA1a","HEAT STRESS TRANSCRIPTION FACTOR A1","Heat stress transcription factor A1, Heat stress transcription factor A-1, Heat stress transcription factor 13, Heat stress transcription factor 3",3," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0006350 - transcription",null,null,"Os03g0854500","LOC_Os03g63750.1","Os05g0406100","Os05g0548300","Os03g0118800",2.9872677,0,null,"PROG1","OsPROG1","PROSTRATE GROWTH 1","zinc-finger nuclear transcription factor PROG1",7," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0048873 - homeostasis of number of cells within a tissue, GO:0009536 - plastid, GO:0005634 - nucleus, GO:0016563 - transcription activator activity","TO:0000440 - grain number per plant, TO:0000449 - grain yield per plant, TO:0000547 - primary branch number, TO:0002759 - grain number, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000557 - secondary branch number, TO:0000567 - tiller angle","PO:0005001 - basal axillary shoot system , PO:0008017 - leaf sheath pulvinus , PO:0008019 - leaf lamina base , PO:0009081 - inflorescence branch ","Os07g0153600","LOC_Os07g05900.1"]
[{"$nulls":23},"Os08g0414700","Os11g0119700","Os11g0275500","Os11g0275500",4.7777877,5.0073223,null,"Os01g0822900",3.8798516,"Os11g0438700",-1.3608128,{"$nulls":29},"MED14_1 ","OsMED14_1","MEDIATOR 14_1 ","Mediator 14_1, Mediator subunit 14_1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0001944 - vasculature development, GO:0048653 - anther development, GO:0070847 - core mediator complex, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048366 - leaf development, GO:0009556 - microsporogenesis, GO:0051301 - cell division, GO:0010252 - auxin homeostasis, GO:0016592 - mediator complex","TO:0000146 - seed length, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000621 - inflorescence development trait, TO:0000382 - 1000-seed weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000370 - leaf width, TO:0001035 - stem width, TO:0000470 - vascular tissue related trait, TO:0000539 - large vascular bundle number, TO:0000558 - small vascular bundle number, TO:0000257 - root branching, TO:0001013 - lateral root number, TO:0000050 - inflorescence branching, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002672 - auxin content, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009066 - anther , PO:0025034 - leaf , PO:0009005 - root , PO:0009071 - anther wall tapetum , PO:0001004 - anther development stage , PO:0009051 - spikelet , PO:0020048 - microspore , PO:0005029 - root primordium , PO:0001083 - inflorescence development stage , PO:0001050 - leaf development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0332800 ","LOC_Os08g24400.1",{"$nulls":7},"_","OsMS2, MS2, OsDPW, DPW, DPW1, OsDPW1","_","MALE STERILITY 2, male sterility protein 2, defective pollen wall",3," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010584 - pollen exine formation, GO:0009651 - response to salt stress, GO:0048653 - anther development, GO:0080110 - sporopollenin biosynthetic process, GO:0010208 - pollen wall assembly, GO:0042542 - response to hydrogen peroxide, GO:0080019 - fatty acyl-CoA reductase (alcohol-forming) activity","TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000432 - temperature response trait, TO:0000214 - anther shape, TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os03g0167600","LOC_Os03g07140.1",{"$nulls":6},"qLG-4","qLG-4","seed longevity (QTL)-4","seed longevity (QTL)-4",4," Seed - Physiological traits - Longevity",{"$nulls":11},"HSFA2A","HSfA2a, OsHsfA2a, OsHsf-11, rHsf4, OsHSF11, HSF11, HSF4, RHSP2, OsHsfA2a-1, OsHsfA2a-2, OsHsfA2a-3, OsHsfA2a-4, OsHsfA2a-5, OsHsfA2a-6, OsHsfA2e, HsfA2e","HEAT STRESS TRANSCRIPTION FACTOR A2A","Heat stress transcription factor A2a, Heat stress transcription factor A-2a, Heat stress transcription factor 11, Heat stress transcription factor 4, Heat shock protein 41, Heat shock transcription factorA2",3," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006950 - response to stress, GO:0005737 - cytoplasm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0005829 - cytosol, GO:0009408 - response to heat, GO:0003700 - transcription factor activity","TO:0000429 - salt sensitivity, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0745000","LOC_Os03g53340.6, LOC_Os03g53340.5, LOC_Os03g53340.4, LOC_Os03g53340.3, LOC_Os03g53340.2, LOC_Os03g53340.1","Os04g0468600","Os02g0743400","Os01g0580500",2.9776776,0,null,"EP2","ep2, EP2/DEP2/SRS1, SRS1/DEP2, DEP2, SRS1, CL7(t), OsRELA, RELA","ERECT PANICLE 2","erect panical 2, Erect panicle2, erect panicle2-1, erect panicle2-2, dense and erect panicle 2, small and round seed 1, cleistogamy 7, cleistogamy gene on chromosome 7, regulator of leaf angle",7," Vegetative organ - Leaf,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000557 - secondary branch number, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000472 - vascular bundle number, TO:0000339 - stem thickness, TO:0000040 - panicle length, TO:0000180 - spikelet fertility, TO:0000402 - grain width, TO:0000382 - 1000-seed weight, TO:0000051 - stem strength, TO:0002637 - leaf size, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000397 - grain size","PO:0009005 - root , PO:0020104 - leaf sheath , PO:0005020 - vascular bundle , PO:0009047 - stem , PO:0009082 - spikelet floret ","Os07g0616000","LOC_Os07g42410.1"]
[{"$nulls":23},"Os08g0473900","Os02g0640700","Os03g0829200","Os03g0829200",-2.4302795,-1.7933804,null,"Os02g0652600",3.879513,"Os12g0621300",-1.3601975,{"$nulls":29},"SFR6","OsMed16_1, Med16_1, OsSFR6, OsMED16, MED16","SENSITIVE TO FREEZING-6","Mediator 16_1, Mediator complex subunit 16, Mediator subunit 16",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0070265 - necrotic cell death, GO:0010942 - positive regulation of cell death, GO:0045926 - negative regulation of growth, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006970 - response to osmotic stress, GO:0050826 - response to freezing, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0010310 - regulation of hydrogen peroxide metabolic process","TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000173 - ethylene sensitivity, TO:0000495 - chlorophyll content, TO:0000357 - growth and development trait, TO:0000371 - yield trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000149 - seed width, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance","PO:0009047 - stem , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0020105 - ligule , PO:0025034 - leaf , PO:0009005 - root ","Os10g0498700","LOC_Os10g35560.2, LOC_Os10g35560.1",{"$nulls":7},"CER1","OsCER1, OsGL1-4, GL1-4, Os CER1","ECERIFERUM 1","ECERIFERUM 1, Glossy1-homologous gene 4",2," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042335 - cuticle development, GO:0016021 - integral to membrane, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process, GO:0005506 - iron ion binding, GO:0046185 - aldehyde catabolic process, GO:0016491 - oxidoreductase activity, GO:0043447 - alkane biosynthetic process, GO:0010229 - inflorescence development, GO:0048653 - anther development, GO:0042542 - response to hydrogen peroxide, GO:0009657 - plastid organization, GO:0009555 - pollen development","TO:0002657 - oxidative stress, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000709 - leaf gloss, TO:0000437 - male sterility","PO:0001083 - inflorescence development stage , PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0009071 - anther wall tapetum , PO:0009066 - anther , PO:0020048 - microspore , PO:0009051 - spikelet ","Os02g0621300","LOC_Os02g40784.3, LOC_Os02g40784.1",{"$nulls":6},"qLG-9","qLG-9","seed longevity (QTL)-9","seed longevity (QTL)-9",9," Seed - Physiological traits - Longevity",{"$nulls":11},"HSFA2B","HSfA2b, OsHsfA2b, OsHsf-18, rHsf5, HS1, HSF18, OsHSF18, HSF5, OsHSF5","HEAT STRESS TRANSCRIPTION FACTOR A2B","Heat stress transcription factor A2b, Heat stress transcription factor A-2b, Heat stress transcription factor 18, Heat stress transcription factor 5",7," Tolerance and resistance - Stress tolerance","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009628 - response to abiotic stimulus, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0006950 - response to stress","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os07g0178600","LOC_Os07g08140.1","Os11g0115400","Os09g0298100","Os04g0225700",2.956993,0,null,"LPS1","SDH2, SDHB, sdhB, RPS14, rps14, sdh2-1, SDH2-RPS14, OsLPS1, OsSDH2-1","LATE PREMATURE SENESCENCE 1","SUCCINATE:UBIQUINONE OXIDOREDUCTASE, mitochondrial succinate dehydrogenase subunit B, ribosomal protein S14, succinate dehydrogenase (iron-sulphur protein subunit), chimeric SDH2-RPS14",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion, GO:0006099 - tricarboxylic acid cycle, GO:0009055 - electron carrier activity, GO:0016491 - oxidoreductase activity, GO:0009658 - chloroplast organization, GO:0007005 - mitochondrion organization, GO:0000104 - succinate dehydrogenase activity, GO:0010150 - leaf senescence, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000249 - leaf senescence, TO:0000040 - panicle length, TO:0002715 - chloroplast development trait, TO:0000447 - filled grain number, TO:0000522 - stomatal conductance, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0000621 - inflorescence development trait, TO:0000639 - seed fertility, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content, TO:0006032 - panicle size, TO:0001015 - photosynthetic rate, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0009072 - plant ovary , PO:0000025 - root tip , PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os08g0120000","LOC_Os08g02640.1, LOC_Os08g02640.2, LOC_Os08g02640.3, LOC_Os08g02640.4, LOC_Os08g02640.5"]
[{"$nulls":23},"Os08g0509400","Os01g0670800","Os02g0532900","Os02g0532900",4.6136327,2.0345922,null,"Os04g0548500",3.877023,"Os03g0172000",-1.3587781,{"$nulls":29},"LLB","OsLLB, LCMT, OsMTS1, MTS1, PLS3","LESION AND LAMINA BENDING ","leucine carboxyl methyltransferase, Premature leaf senescence 3, O-methyltransferase 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus, GO:0005829 - cytosol, GO:0008219 - cell death, GO:0010150 - leaf senescence, GO:0030187 - melatonin biosynthetic process, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0048573 - photoperiodism, flowering, GO:0005886 - plasma membrane, GO:0032259 - methylation, GO:0042742 - defense response to bacterium, GO:0009507 - chloroplast, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0042542 - response to hydrogen peroxide, GO:0009742 - brassinosteroid mediated signaling","TO:0000295 - chlorophyll-b content, TO:0000326 - leaf color, TO:0002616 - flowering time, TO:0002668 - jasmonic acid content, TO:0000175 - bacterial blight disease resistance, TO:0000396 - grain yield, TO:0000074 - blast disease, TO:0002671 - momilactone B content, TO:0002670 - momilactone A content, TO:0000137 - days to heading, TO:0001015 - photosynthetic rate, TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response, TO:0002688 - leaf lamina joint bending, TO:0000293 - chlorophyll-a content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os07g0247100 ","LOC_Os07g14350.1, LOC_Os07g14350.2",{"$nulls":7},"_","OsGRL10, GRL10, OsSTA146, STA146","_","GRX-like protein 10, glutaredoxin-like protein 10",5," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0015035 - protein disulfide oxidoreductase activity, GO:0045454 - cell redox homeostasis, GO:0009055 - electron carrier activity",null,"PO:0009066 - anther ","Os05g0353600","LOC_Os05g28530.1",{"$nulls":6},"GLU4","glu4a","GLUTELIN 4","rice glutelin-4a",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",{"$nulls":10},"HSFA2C","HSfA2c, OsHsfA2c, OsHsf-25, rHsf6, OsHSF6, HSF25, OsHSF25, HSF6, OsHsfA6a, HsfA6a","HEAT STRESS TRANSCRIPTION FACTOR A2C","Heat stress transcription factor A2c, Heat stress transcription factor A-2c, Heat stress transcription factor 25, Heat stress transcription factor 6",10," Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0009628 - response to abiotic stimulus, GO:0003700 - transcription factor activity, GO:0006950 - response to stress","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os10g0419300","LOC_Os10g28340.5, LOC_Os10g28340.3, LOC_Os10g28340.2, LOC_Os10g28340.1","Os06g0352900","Os08g0545700","Os03g0564600",2.9532986,0,null,"BU1","ILI4, OsILI4, OsBU1, BU1/ILI4, OsbHLH172, bHLH172","BRASSINOSTEROID UPREGULATED 1","BRASSINOSTEROID UPREGULATED1, Increased Leaf Inclination4, BR upregulated 1, basic helix-loop-helix protein 172",6," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0005737 - cytoplasm, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0040008 - regulation of growth, GO:0046983 - protein dimerization activity, GO:0009723 - response to ethylene stimulus","TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002677 - brassinosteroid sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000172 - jasmonic acid sensitivity, TO:0000734 - grain length, TO:0000173 - ethylene sensitivity","PO:0005052 - plant callus ","Os06g0226500","LOC_Os06g12210.1"]
[{"$nulls":23},"Os08g0522500","Os03g0238600","Os01g0946600","Os01g0946600",6.706499,3.953078,null,"Os05g0554400",3.8717346,"Os07g0688500",-1.3581719,{"$nulls":29},"LTS1 ","OsNaPRT1, OsNaPRT1/LTS1, NaPRT1","LEAF TIP SENESCENCE 1  ","Leaf Tip Senescence 1, Nicotinate Phosphoribosyltransferase 1, NaPRTase 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0010150 - leaf senescence, GO:0034355 - NAD salvage, GO:0019358 - nicotinate nucleotide salvage, GO:0009435 - NAD biosynthetic process, GO:0004516 - nicotinate phosphoribosyltransferase activity, GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0043970 - histone H3-K9 acetylation","TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000249 - leaf senescence",null,"Os03g0837300","LOC_Os03g62110.2, LOC_Os03g62110.3",{"$nulls":7},"BZIP2","OsbZIP02, OsbZIP2, OsSTA8","b-ZIP TRANSCRIPTION FACTOR 2","b-ZIP transcription factor 02",1," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding",null,"PO:0009066 - anther ","Os01g0211800","LOC_Os01g11350.1",{"$nulls":6},"qSH-1-3(t) (sh1.1)","qSH-1-3(t) (sh1.1)","shatterring (QTL)-1-3(t)","shatterring (QTL)-1-3(t)",1," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA2D","HSfA2d, OsHsfA2d, OsHsf-08, rHsf7, HSF08, OsHSF8, HSF8, HSF7, OsHSF7, OsHSFA2dI, OsHSFA2dII, OsHSFA2dIII, OsHsfA6b, HsfA6b, OsHsf2d, Hsf2d","HEAT STRESS TRANSCRIPTION FACTOR A2D","Heat stress transcription factor A2d, Heat stress transcription factor A-2d, Heat stress transcription factor 8, Heat stress transcription factor 7",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0048571 - long-day photoperiodism, GO:0009629 - response to gravity, GO:0009926 - auxin polar transport, GO:0005829 - cytosol, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm, GO:0006350 - transcription, GO:0006986 - response to unfolded protein, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0009408 - response to heat, GO:0009734 - auxin mediated signaling pathway","TO:0000075 - light sensitivity, TO:0000259 - heat tolerance, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0002693 - gravity response trait",null,"Os03g0161900","LOC_Os03g06630.1, LOC_Os03g06630.2","Os04g0166000","Os03g0351200","Os05g0187100",2.9419963,0,null,"SP3","OsDof15, Dof15, OsDof-15, DOF15","SHORT PANICLE 3","Dof zinc factor 15, Dof transcription factor 15, DNA BINDING WITH ONE FINGER 15, Short Panicle 3",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0048364 - root development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009690 - cytokinin metabolic process, GO:0009873 - ethylene mediated signaling pathway, GO:0008284 - positive regulation of cell proliferation, GO:0009651 - response to salt stress, GO:0010082 - regulation of root meristem growth, GO:0010081 - regulation of inflorescence meristem growth","TO:0000656 - root development trait, TO:0000557 - secondary branch number, TO:0002660 - cytokinin content, TO:0000434 - root activity, TO:0000371 - yield trait, TO:0000592 - 1000-dehulled grain weight, TO:0000373 - inflorescence anatomy and morphology trait, TO:0002692 - root meristem development, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0000227 - root length, TO:0000145 - internode length, TO:0000173 - ethylene sensitivity, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000734 - grain length, TO:0000050 - inflorescence branching, TO:0000456 - spikelet number, TO:0006032 - panicle size","PO:0009049 - inflorescence ","Os03g0764900 ","LOC_Os03g55610.1"]
[{"$nulls":23},"Os08g0562100","Os06g0683300","Os05g0189900","Os05g0189900",7.6789317,7.353548,null,"Os03g0265900",3.8696945,"Os01g0318400",-1.3575705,{"$nulls":29},"AL1 ","AL1a, AL1b, AL1c","ALBINO LEAF 1",null,3," Vegetative organ - Leaf,  Vegetative organ - Root,  Coloration - Chlorophyll","GO:0009658 - chloroplast organization, GO:0006364 - rRNA processing, GO:0010027 - thylakoid membrane organization","TO:0000227 - root length, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait",null,"Os03g0425000 ","LOC_Os03g31150.1, LOC_Os03g31150.2, LOC_Os03g31150.3",{"$nulls":7},"BZIP16","OsbZIP16, OsSTA51","b-ZIP TRANSCRIPTION FACTOR 16","b-ZIP transcription factor 16, Basic leucine zipper transcription factor OsbZIP16",2," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding",null,"PO:0009066 - anther ","Os02g0191600","LOC_Os02g09830.1",{"$nulls":6},"qSH-3-2(t) (sh3.1)","qSH-3-2(t) (sh3.1)","shattering (QTL)-3-2(t)","shattering (QTL)-3-2(t)",3," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA2E","HSfA2e, OsHsfA2e, OsHsf-12, OsHSF12, HSF12, OsHsfA2a, HsfA2a","HEAT STRESS TRANSCRIPTION FACTOR A2E","Heat stress transcription factor A2e, Heat stress transcription factor A-2e, Heat stress transcription factor 12",3," Tolerance and resistance - Stress tolerance","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0043565 - sequence-specific DNA binding, GO:0005829 - cytosol, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm",null,null,"Os03g0795900","LOC_Os03g58160.2, LOC_Os03g58160.1","Os10g0150600","Os06g0143700","Os05g0571200",2.9214642,0,null,"SMG1","OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6","SMALL GRAIN 1","MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11",2," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0008283 - cell proliferation, GO:0050832 - defense response to fungus, GO:0009741 - response to brassinosteroid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009690 - cytokinin metabolic process, GO:0009611 - response to wounding, GO:0045595 - regulation of cell differentiation, GO:0009742 - brassinosteroid mediated signaling, GO:0009751 - response to salicylic acid stimulus, GO:0048364 - root development, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009409 - response to cold, GO:0009743 - response to carbohydrate stimulus, GO:0080027 - response to herbivore, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0010229 - inflorescence development, GO:0000165 - MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus","TO:0000454 - stem borer resistance, TO:0000396 - grain yield, TO:0002669 - diterpenoid phytoalexin content, TO:0000615 - abscisic acid sensitivity, TO:0000397 - grain size, TO:0000439 - fungal disease resistance, TO:0000447 - filled grain number, TO:0002677 - brassinosteroid sensitivity, TO:0002660 - cytokinin content, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000734 - grain length","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage ","Os02g0787300","LOC_Os02g54600.1"]
[{"$nulls":23},"Os08g0566400","Os02g0726300","Os08g0531000","Os08g0531000",2.6291068,4.5972238,null,"Os07g0229700",3.8663642,"Os08g0480050",-1.3575033,{"$nulls":29},"_","OsBDG1, BDG1","_","OsBUL1 DOWNSTREAM GENE1, OsBUL1 DOWNSTREAM GENE 1, BUL1 DOWNSTREAM GENE1, BUL1 DOWNSTREAM GENE 1",11," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009651 - response to salt stress, GO:0016301 - kinase activity, GO:0009609 - response to symbiotic bacterium","TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0006001 - salt tolerance","PO:0009049 - inflorescence , PO:0020039 - leaf lamina ","Os11g0514400 ","LOC_Os11g31530.1",{"$nulls":7},"_","OsPFA-DSP4, OsSTA281","_","plant and fungi atypical dual-specificity phosphatase 4",12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004725 - protein tyrosine phosphatase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation",null,"PO:0009066 - anther ","Os12g0420300","LOC_Os12g23190.1",{"$nulls":6},"qSH-4-3(t) (sh4.1)","qSH-4-3(t) (sh4.1)","shattering (QTL)-4-3(t)","shattering (QTL)-4-3(t)",4," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA3","HSfA3, OsHsfA3, OsHsf-07, HSF07, OsHSF7, HSF7, DLN57, OsDLN57","HEAT STRESS TRANSCRIPTION FACTOR A3","Heat stress transcription factor A3, Heat stress transcription factor A-3, Heat stress transcription factor 7, DLN repressor 57, DLN motif protein 57",2," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006350 - transcription, GO:0046466 - membrane lipid catabolic process, GO:0010967 - regulation of polyamine biosynthetic process, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0005829 - cytosol, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006970 - response to osmotic stress, GO:0030104 - water homeostasis, GO:0006950 - response to stress","TO:0000095 - osmotic response sensitivity, TO:0000227 - root length, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0002667 - abscisic acid content, TO:0000168 - abiotic stress trait","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence ","Os02g0527300","LOC_Os02g32590.2, LOC_Os02g32590.1","Os10g0150800","Os08g0156600","Os09g0433800",2.919576,0,null,"FIE2","OsFIE2, FIE, OsWD40-153","FERTILIZATION-INDEPENDENT ENDOSPERM 2","FERTILIZATION-INDEPENDENT ENDOSPERM2, Fertilization-Independent Endosperm 2, Polycomb protein OsFIE2",8," Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity","GO:0043078 - polar nucleus, GO:0009409 - response to cold, GO:0016571 - histone methylation, GO:0006349 - genetic imprinting, GO:0000003 - reproduction",null,"PO:0020056 - tegmen ","Os08g0137100","LOC_Os08g04270.1, LOC_Os08g04270.2, LOC_Os08g04270.3"]
[{"$nulls":23},"Os09g0327400","Os05g0500600","Os12g0637400","Os12g0637400",4.0440764,2.5791647,null,"Os05g0524400",3.8647003,"Os02g0782600",-1.3563666,{"$nulls":29},"FTSH2","OsFtsH2, FtsH2","_",null,6," Biochemical character,  Vegetative organ - Leaf","GO:0004176 - ATP-dependent peptidase activity, GO:0046872 - metal ion binding, GO:0004222 - metalloendopeptidase activity, GO:0005524 - ATP binding, GO:0006508 - proteolysis, GO:0008237 - metallopeptidase activity, GO:0009535 - chloroplast thylakoid membrane, GO:0009737 - response to abscisic acid stimulus, GO:0009941 - chloroplast envelope, GO:0010027 - thylakoid membrane organization, GO:0010150 - leaf senescence, GO:0010205 - photoinhibition, GO:0010206 - photosystem II repair, GO:0010304 - PSII associated light-harvesting complex II catabolic process, GO:0016021 - integral to membrane","TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity","PO:0001054 - 4 leaf senescence stage ","Os06g0669400","LOC_Os06g45820.4, LOC_Os06g45820.3, LOC_Os06g45820.1, LOC_Os06g45820.2",{"$nulls":7},"_","OsPHS1b, OsPP4, OsSTA14","_","Protein phosphatase 4",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0004725 - protein tyrosine phosphatase activity, GO:0033549 - MAP kinase phosphatase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0008270 - zinc ion binding, GO:0005737 - cytoplasm, GO:0008138 - protein tyrosine/serine/threonine phosphatase activity",null,"PO:0009066 - anther ","Os01g0347000","LOC_Os01g24470.1, LOC_Os01g24470.2",{"$nulls":6},"qSH-3-3(t) (sh3.2)","qSH-3-3(t) (sh3.2)","shattering (QTL)-3-3(t)","shattering (QTL)-3-3(t)",3," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA4A","OsHsfA4a, OsHsf-04, HSFA4B, HSF04, OsHSF4, HSF4, HSF9, OsHsfA4b, OsHSF9","HEAT STRESS TRANSCRIPTION FACTOR A4a","Heat stress transcription factor A4a, Heat stress transcription factor A-4b, Heat stress transcription factor 4, heat shock transcription factor 9",1," Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0043565 - sequence-specific DNA binding, GO:0005737 - cytoplasm, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress",null,null,"Os01g0749300","LOC_Os01g54550.1","Os02g0705400","Os01g0290600","Os06g0126500",2.894828,0,null,"WFP","OsSPL14, SPL14, IPA1, WFP/IPA1, OsSPL14/WFP/IPA1, OsIPA1, IPA1/OsSPL14","WEALTHY FARMER'S PANICLE","IDEAL PLANT ARCHITECTURE 1, Ideal Plant Architecture 1, Ideal Plant Architecture1, Squamosa promoter-binding-like protein 14, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14, Squamosa promoter binding protein like-14, IDEAL PLANT ARCHITECTURE1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0010050 - vegetative phase change, GO:0006350 - transcription, GO:0009607 - response to biotic stimulus, GO:0010187 - negative regulation of seed germination, GO:0005982 - starch metabolic process, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0048366 - leaf development, GO:0003677 - DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0045449 - regulation of transcription, GO:0009755 - hormone-mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process","TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000017 - anatomy and morphology related trait, TO:0000547 - primary branch number, TO:0000357 - growth and development trait, TO:0000011 - nitrogen sensitivity, TO:0002689 - leaf sheath length, TO:0000621 - inflorescence development trait, TO:0000340 - total soluble sugar content, TO:0000653 - seed development trait, TO:0000179 - biotic stress trait, TO:0000447 - filled grain number, TO:0000166 - gibberellic acid sensitivity, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000455 - seed set percent, TO:0000175 - bacterial blight disease resistance, TO:0000152 - panicle number, TO:0000135 - leaf length, TO:0002759 - grain number","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007057 - 0 seed germination stage ","Os08g0509600","LOC_Os08g39890.1"]
[{"$nulls":23},"Os09g0422500","Os06g0286310","Os07g0681200","Os07g0681200",5.923565,3.1730137,null,"Os03g0162200",3.864251,"Os02g0135300",-1.3554794,{"$nulls":29},"_","PSF","_","premature senescence of flag leaves",null," Vegetative organ - Leaf","GO:0010150 - leaf senescence, GO:0009416 - response to light stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0010206 - photosystem II repair","TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000075 - light sensitivity, TO:0000298 - chlorophyll ratio, TO:0000496 - carotenoid content, TO:0002667 - abscisic acid content, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ",{"$nulls":9},"GRF6","OsGRF6","GROWTH-REGULATING FACTOR 6","growth-regulating factor6, GROWTH REGULATING FACTOR 6",3," Biochemical character,  Vegetative organ - Culm,  Seed,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0051510 - regulation of unidimensional cell growth, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus","TO:0000653 - seed development trait, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000240 - sterile lemma length, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000074 - blast disease, TO:0000620 - embryo development trait","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0009009 - plant embryo ","Os03g0729500","LOC_Os03g51970.1",{"$nulls":6},"qSH-7-1(t) (sh7.1)","qSH-7-1(t) (sh7.1)","shattering (QTL)-7-1(t)","shattering (QTL)-7-1(t)",7," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA5","HSfA5, OsHsfA5, OsHsf-06, HSF06, OsHSF6, HSF6","HEAT STRESS TRANSCRIPTION FACTOR A5","Heat stress transcription factor A5, Heat stress transcription factor A-5, Heat stress transcription factor 6",2," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005829 - cytosol, GO:0006350 - transcription, GO:0005737 - cytoplasm, GO:0006950 - response to stress",null,null,"Os02g0496100","LOC_Os02g29340.1","Os10g0422600","Os03g0300400","Os11g0701100",2.8815715,0,null,"GW2","OsGW2","GRAIN WEIGHT 2","GRAIN WIDTH AND WEIGHT2, Grain width 2",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016874 - ligase activity, GO:0080050 - regulation of seed development, GO:0008270 - zinc ion binding, GO:0006109 - regulation of carbohydrate metabolic process","TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000402 - grain width, TO:0000397 - grain size","PO:0009005 - root , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0009066 - anther , PO:0005360 - aleurone layer ","Os02g0244100","LOC_Os02g14720.1, LOC_Os02g14720.2"]
[{"$nulls":23},"Os09g0433000","Os05g0513800","Os04g0649700","Os04g0649700",2.1487694,2.0595152,null,"Os08g0512600",3.8642178,"Os02g0244700",-1.3553886,{"$nulls":29},"FTSH9","OsFtsH9, FtsH9, OsFtsH2, FtsH2","_","Filamentation temperature-sensitive H2",1," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0006508 - proteolysis, GO:0005739 - mitochondrion, GO:0009409 - response to cold, GO:0046872 - metal ion binding, GO:0031966 - mitochondrial membrane, GO:0009941 - chloroplast envelope, GO:0016021 - integral to membrane, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0004176 - ATP-dependent peptidase activity, GO:0004222 - metalloendopeptidase activity, GO:0005524 - ATP binding, GO:0008237 - metallopeptidase activity, GO:0009535 - chloroplast thylakoid membrane, GO:0010304 - PSII associated light-harvesting complex II catabolic process","TO:0001018 - transpiration rate, TO:0000207 - plant height, TO:0000293 - chlorophyll-a content, TO:0000316 - photosynthetic ability, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000303 - cold tolerance, TO:0002715 - chloroplast development trait, TO:0000605 - hydrogen peroxide content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate","PO:0025034 - leaf ","Os01g0618800","LOC_Os01g43150.1, LOC_Os01g43150.2, LOC_Os01g43150.3",{"$nulls":7},"GRF10","OsGRF10","GROWTH-REGULATING FACTOR 10","growth-regulating factor10",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus, GO:0005524 - ATP binding, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0006022 - floral organ development trait, TO:0000240 - sterile lemma length","PO:0009009 - plant embryo ","Os02g0678800","LOC_Os02g45570.1, LOC_Os02g45570.2",{"$nulls":6},"qSH-8-2(t) (sh8.1)","qSH-8-2(t) (sh8.1)","shattering (QTL)-8-2(t)","shattering (QTL)-8-2(t)",8," Seed - Physiological traits - Shattering",{"$nulls":11},"HSFA6","HSfA6, OsHsfA6, OsHsf-17, HSF17, OsHSF17, HSFA6A, OsHsfA2f, HsfA2f, OsHsfA7b, HsfA7b","HEAT STRESS TRANSCRIPTION FACTOR A6","Heat stress transcription factor A6, Putative heat stress transcription factor A-6a, Heat stress transcription factor 17",6," Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009628 - response to abiotic stimulus, GO:0006350 - transcription, GO:0006950 - response to stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005829 - cytosol, GO:0005737 - cytoplasm","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os06g0565200","LOC_Os06g36930.1","Os05g0557400","Os03g0700700","Os03g0293500",2.8784456,0,null,"PTR6","OsPTR6, OsNRT1;2, NRT1;2, OsNPF7.3, NPF7.3","PROTEIN TRANSPORTER 6","PTR/NRT1 transporter 6, nitrate transporter 1/peptide transporter family 7.3, PTR/NRT1 family 7.3, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 7.3",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016020 - membrane, GO:0015197 - peptide transporter activity, GO:0044270 - nitrogen compound catabolic process, GO:0045848 - positive regulation of nitrogen utilization, GO:0005774 - vacuolar membrane, GO:0010167 - response to nitrate, GO:0005215 - transporter activity","TO:0002673 - amino acid content, TO:0000447 - filled grain number, TO:0000152 - panicle number, TO:0000396 - grain yield, TO:0000346 - tiller number","PO:0020121 - lateral root , PO:0009047 - stem ","Os04g0597800","LOC_Os04g50950.1"]
[{"$nulls":23},"Os09g0452900","Os03g0563300","Os10g0492400","Os10g0492400",3.6525242,3.4061668,null,"Os01g0216000",3.8623073,"Os04g0271200",-1.3546611,{"$nulls":29},"TCD5","OsTCD5, TSV, OsTSV, CSV1, OsCSV1","THERMO-SENSITIVE CHLOROPLAST DEVELOPMENT 5","thermo-sensitive chloroplast development 5, temperature-sensitive virescent, cold sensitive virescent1",5," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0009536 - plastid, GO:0009658 - chloroplast organization, GO:0010027 - thylakoid membrane organization, GO:0016491 - oxidoreductase activity, GO:0048366 - leaf development, GO:0015995 - chlorophyll biosynthetic process, GO:0007623 - circadian rhythm","TO:0000295 - chlorophyll-b content, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000655 - leaf development trait, TO:0002715 - chloroplast development trait, TO:0000207 - plant height, TO:0000069 - variegated leaf, TO:0000303 - cold tolerance","PO:0001050 - leaf development stage , PO:0005426 - chlorenchyma , PO:0025034 - leaf ","Os05g0411200","LOC_Os05g34040.2, LOC_Os05g34040.1",{"$nulls":7},"CYP704B2","OsCYP704B2","CYTOCHROME P450 HYDROXYLASE 704B2","Cytochrome P450 704B2",3," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010208 - pollen wall assembly, GO:0018685 - alkane 1-monooxygenase activity, GO:0042542 - response to hydrogen peroxide, GO:0080110 - sporopollenin biosynthetic process, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0048653 - anther development","TO:0002657 - oxidative stress","PO:0001004 - anther development stage ","Os03g0168600","LOC_Os03g07250.1",{"$nulls":6},"qGC-6-1(t) (GC)","qGC-6-1(t) (GC)","gel consistency (QTL)-6-1(t)","gel consistency (QTL)-6-1(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"HSFA7","OsHsfA7, OsHsf-01, HSFA6B, HSF01, OsHSF1, HSF1, OsEnS-9, OsHsfA7a, HsfA7a","HEAT STRESS TRANSCRIPTION FACTOR A7","Heat stress transcription factor A7, Heat stress transcription factor A-6a, Heat stress transcription factor 1, endosperm-specific gene 9",1," Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009628 - response to abiotic stimulus, GO:0005739 - mitochondrion, GO:0003700 - transcription factor activity, GO:0006950 - response to stress, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os01g0571300","LOC_Os01g39020.1","Os02g0504000","Os04g0659300","Os11g0175700",2.8523216,0,null,"EP3","EP3/LP, LP, OsLP, OsFbox076, OsFbox76, Os_F0106, OsEP3","ERECT PANICLE 3","LARGER PANICLE, F-box protein 76",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0048513 - organ development, GO:0048437 - floral organ development, GO:0048316 - seed development, GO:0005737 - cytoplasm, GO:0009908 - flower development, GO:0010118 - stomatal movement, GO:0009760 - C4 photosynthesis, GO:0010052 - guard cell differentiation, GO:0005634 - nucleus","TO:0000391 - seed size, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0006029 - glume number, TO:0000225 - stamen number, TO:0002768 - spikelet length, TO:0000564 - spikelet width, TO:0000371 - yield trait, TO:0000269 - 100-seed weight, TO:0000050 - inflorescence branching, TO:0000734 - grain length, TO:0000625 - spikelet density, TO:0000531 - anther length, TO:0006013 - carpel number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0006022 - floral organ development trait, TO:0000370 - leaf width, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0002600 - flower organ size, TO:0000397 - grain size, TO:0000357 - growth and development trait, TO:0006038 - floral organ number, TO:0000622 - flower development trait, TO:0000421 - pollen fertility","PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0006036 - root epidermis , PO:0020123 - root cap , PO:0009013 - portion of meristem tissue , PO:0020127 - primary root , PO:0009046 - flower , PO:0009010 - seed , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0025585 - floral organ formation stage , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage ","Os02g0260200","LOC_Os02g15950.1"]
[{"$nulls":23},"Os09g0491100","Os01g0701900","Os04g0683600","Os04g0683600",2.4260476,2.266947,null,"Os03g0751400",3.8618753,"Os11g0181100",-1.354334,{"$nulls":29},"TSD2 ","OsTSD2, OsQUA2, QUA2","TUMOROUS SHOOT DEVELOPMENT 2","TUMOROUS SHOOT DEVELOPMENT2, QUASIMODO2, QUASIMODO 2",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0050801 - ion homeostasis, GO:0009827 - plant-type cell wall modification, GO:0009635 - response to herbicide, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0005768 - endosome, GO:0005774 - vacuolar membrane, GO:0010618 - aerenchyma formation, GO:0016021 - integral to membrane, GO:0010394 - homogalacturonan metabolic process, GO:0009733 - response to auxin stimulus, GO:0005794 - Golgi apparatus, GO:0009651 - response to salt stress, GO:0015996 - chlorophyll catabolic process, GO:0008168 - methyltransferase activity, GO:0032259 - methylation, GO:0045488 - pectin metabolic process, GO:0005802 - trans-Golgi network, GO:0007155 - cell adhesion, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0045489 - pectin biosynthetic process, GO:0048364 - root development, GO:0010150 - leaf senescence","TO:0000396 - grain yield, TO:0020003 - shoot potassium content, TO:0020004 - shoot sodium content, TO:0000058 - herbicide sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0001013 - lateral root number, TO:0000328 - sucrose content, TO:0002668 - jasmonic acid content, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009047 - stem , PO:0007520 - root development stage , PO:0005020 - vascular bundle , PO:0001031 - 4 root elongation stage ","Os02g0755000","LOC_Os02g51860.1",{"$nulls":7},"_","OsCBSDUF3, OsSTA88","_","cystathionine b-synthase domain containing protein OsCBSDUF3, CBS domain containing protein OsCBSDUF3",3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0125800","LOC_Os03g03430.1",{"$nulls":6},"qAC-3-1(t) (qAC-3)","qAC-3-1(t) (qAC-3)","amylose content (QTL)-3-1(t)","amylose content (QTL)-3-1(t)",3," Seed - Physiological traits - Storage substances",{"$nulls":11},"HSFA9","HSfA9, OsHsfA9, OsHsf-09, rHsf8, HSF09, OsHSF9, HSF9, HSF8, OsHsfA8, HsfA8","HEAT STRESS TRANSCRIPTION FACTOR A9","Heat stress transcription factor A9, Heat stress transcription factor A-9, Heat stress transcription factor 9, Heat stress transcription factor 8",3," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0005737 - cytoplasm, GO:0006950 - response to stress, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005829 - cytosol, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os03g0224700","LOC_Os03g12370.4, LOC_Os03g12370.3, LOC_Os03g12370.2, LOC_Os03g12370.1","Os03g0243700","Os04g0431700","Os04g0530500",2.808035,0,null,"LRA1","OsPIN2, PIN2, OsLRA1","LARGE ROOT ANGLE1","PIN-FORMED 2, large root angle 1, AUXIN EFFLUX CARRIER COMPONENT 2-LIKE",6," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009733 - response to auxin stimulus, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0055085 - transmembrane transport, GO:0009415 - response to water, GO:0009734 - auxin mediated signaling pathway, GO:0009725 - response to hormone stimulus, GO:0005886 - plasma membrane, GO:0009926 - auxin polar transport, GO:0009629 - response to gravity, GO:0042594 - response to starvation","TO:0000043 - root anatomy and morphology trait, TO:0000237 - water stress trait, TO:0002693 - gravity response trait, TO:0000567 - tiller angle, TO:0000401 - plant growth hormone sensitivity, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity","PO:0025256 - lateral root elongation zone , PO:0004013 - epidermal cell , PO:0009005 - root , PO:0008039 - stem base , PO:0000016 - lateral root primordium ","Os06g0660200","LOC_Os06g44970.1"]
[{"$nulls":23},"Os09g0511700","Os01g0235100","Os03g0335500","Os03g0335500",2.5290315,2.4075158,null,"Os09g0304500",3.858783,"Os04g0412300",-1.3519093,{"$nulls":29},"CDS5","OsCDS5, OsVTE5, VTE5","CYTIDINEDIPHOSPHATE-DIACYLGLYCEROL SYNTHASE 5","Cytidinediphosphate-diacylglycerol synthase 5, phytol kinase, VITAMIN E 5",1," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0016301 - kinase activity, GO:0010148 - transpiration, GO:0009414 - response to water deprivation, GO:0010027 - thylakoid membrane organization, GO:0009658 - chloroplast organization, GO:0006970 - response to osmotic stress, GO:0055091 - phospholipid homeostasis, GO:0010189 - vitamin E biosynthetic process","TO:0000326 - leaf color, TO:0000095 - osmotic response sensitivity, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000075 - light sensitivity, TO:0000276 - drought tolerance, TO:0002715 - chloroplast development trait",null,"Os01g0832000","LOC_Os01g61560.1, LOC_Os01g61560.2, LOC_Os01g61560.3",{"$nulls":7},"NAC10","ONAC010, ONAC10, OsSTA199, OsNAC3, NAC3","NAC DOMAIN-CONTAINING PROTEIN 10","NAC domain-containing protein 010, Grain Protein Content 2 homolog, GPC-B2 homolog, NAC domain-containing protein 10",7," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000386 - rice ragged stunt virus resistance","PO:0009066 - anther ","Os07g0566500","LOC_Os07g37920.1",{"$nulls":6},"qAC-4-1(t) (qAC-4)","qAC-4-1(t) (qAC-4)","amylose content (QTL)-4-1(t)","amylose content (QTL)-4-1(t)",4," Seed - Physiological traits - Storage substances",{"$nulls":11},"HSFB1","HSfB1, OsHsfB1, OsHsf-23, HSF23, OsHsf23, OsHSF23, TBF1","HEAT STRESS TRANSCRIPTION FACTOR B1","Heat stress transcription factor B1, Heat stress transcription factor B-1, Heat stress transcription factor 23",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0034052 - positive regulation of plant-type hypersensitive response, GO:0003700 - transcription factor activity, GO:0030912 - response to deep water, GO:0006950 - response to stress, GO:0009817 - defense response to fungus, incompatible interaction, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0005737 - cytoplasm, GO:0009814 - defense response, incompatible interaction, GO:0009628 - response to abiotic stimulus, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription","TO:0000524 - submergence tolerance, TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os09g0456800","LOC_Os09g28354.1","Os01g0645200","Os09g0439800","Os03g0667100",2.7861977,0,null,"CLPC3","ClpC3, OsCLPC3","CLASS I CLP ATPASE C3","class I Clp ATPase C3",11," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003677 - DNA binding, GO:0006289 - nucleotide-excision repair, GO:0004518 - nuclease activity, GO:0019538 - protein metabolic process, GO:0017111 - nucleoside-triphosphatase activity, GO:0008233 - peptidase activity, GO:0005515 - protein binding","TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000152 - panicle number, TO:0000421 - pollen fertility, TO:0000040 - panicle length",null,"Os11g0267400","LOC_Os11g16590.1"]
[{"$nulls":23},"Os09g0511900","Os05g0563000","Os11g0308800","Os11g0308800",4.68484,4.467394,null,"Os03g0592500",3.8585846,"Os01g0720400",-1.3515873,{"$nulls":29},"WSL5","OsWSL5","WHITE STRIPE LEAF 5","white stripe leaf 5",4," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0003723 - RNA binding, GO:0009880 - embryonic pattern specification, GO:0009507 - chloroplast, GO:0008380 - RNA splicing, GO:0042254 - ribosome biogenesis, GO:0048366 - leaf development, GO:0009409 - response to cold, GO:0009658 - chloroplast organization, GO:0005739 - mitochondrion","TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000069 - variegated leaf, TO:0000326 - leaf color, TO:0000303 - cold tolerance, TO:0000293 - chlorophyll-a content",null,"Os04g0684500","LOC_Os04g58780.1, LOC_Os04g58780.2",{"$nulls":7},"YAB3","OsYAB3, OsYAB4, TOB3","YABBY3","YABBY 3, OsYABBY3, Os YABBY3, TONGARI-BOUSHI 3, TONGARI-BOUSHI3",10," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0010158 - abaxial cell fate specification, GO:0046872 - metal ion binding, GO:0010154 - fruit development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0025487 - bract primordium ","Os10g0508300","LOC_Os10g36420.1",{"$nulls":6},"qAC-5-2(t) (qAC-5)","qAC-5-2(t) (qAC-5)","amylose content (QTL)-5-2(t)","amylose content (QTL)-5-2(t)",5," Seed - Physiological traits - Storage substances",{"$nulls":11},"HSFB2A","HSfB2a, OsHsfB2a, OsHsf-14, rHsf1, HSF1, HSF14, OsHSF14","HEAT STRESS TRANSCRIPTION FACTOR B2A","Heat stress transcription factor B2a, Heat stress transcription factor B-2a, Heat stress transcription factor 14, Heat stress transcription factor 1",4," Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005829 - cytosol, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0006950 - response to stress, GO:0009628 - response to abiotic stimulus, GO:0043565 - sequence-specific DNA binding, GO:0005737 - cytoplasm",null,"PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os04g0568700","LOC_Os04g48030.1","Os10g0421800","Os10g0183000","Os01g0968800",2.773338,0,null,"PIN5B","PIN5C, OsPIN5c, OsPIN5b, PIN4","PIN PROTEIN 5B","PIN PROTEIN 5C, PROBABLE AUXIN EFFLUX CARRIER COMPONENT 5C",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0005783 - endoplasmic reticulum, GO:0010252 - auxin homeostasis, GO:0009415 - response to water","TO:0000237 - water stress trait, TO:0000040 - panicle length, TO:0000346 - tiller number",null,"Os08g0529000","LOC_Os08g41720.1"]
[{"$nulls":23},"Os09g0533900","Os01g0221900","Os06g0274500","Os06g0274500",-2.2134187,-1.1578078,null,"Os07g0604600",3.8564072,"Os01g0201100",-1.3511261,{"$nulls":29},"VAL1","OsVAL1, PurD, OsPurD","VIRESCENT-ALBINO LEAF 1",null,8," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others","GO:0051302 - regulation of cell division, GO:0090056 - regulation of chlorophyll metabolic process, GO:0048366 - leaf development, GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0046872 - metal ion binding, GO:0005524 - ATP binding, GO:0043476 - pigment accumulation, GO:0009113 - purine base biosynthetic process, GO:0004637 - phosphoribosylamine-glycine ligase activity, GO:0006164 - purine nucleotide biosynthetic process","TO:0002715 - chloroplast development trait, TO:0000370 - leaf width, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000326 - leaf color","PO:0001050 - leaf development stage ","Os08g0191200","LOC_Os08g09210.1, LOC_Os08g09210.2",{"$nulls":7},"YAB4","OsYAB4, OsYAB7, TOB2","YABBY4","YABBY 4, OsYABBY4, Os YABBY4, TONGARI-BOUSHI 2, TONGARI-BOUSHI2",2," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0046872 - metal ion binding, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0025487 - bract primordium ","Os02g0643200","LOC_Os02g42950.1, LOC_Os02g42950.2",{"$nulls":6},"qAC-6-2(t) (qAC-6)","qAC-6-2(t) (qAC-6)","amylose content (QTL)-6-2(t)","amylose content (QTL)-6-2(t)",6," Seed - Physiological traits - Storage substances",{"$nulls":11},"HSFB2B","HSfB2b, OsHsfB2b, OsHsf-21, rHsf2, HSF2, HSF21, OsHSF21, OsHSF7","HEAT STRESS TRANSCRIPTION FACTOR B2B","Heat stress transcription factor B2b, Heat stress transcription factor B-2b, Heat stress transcription factor 21, Heat stress transcription factor 2, rice HSF7 homolog",8," Tolerance and resistance - Stress tolerance","GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0006950 - response to stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009628 - response to abiotic stimulus, GO:0005634 - nucleus, GO:0009411 - response to UV","TO:0000168 - abiotic stress trait, TO:0000160 - UV light sensitivity","PO:0009089 - endosperm , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo ","Os08g0546800","LOC_Os08g43334.2, LOC_Os08g43334.1","Os04g0613700","Os12g0576600","Os03g0192500",2.7732341,0,null,"RAC1","OsRAC1, OsRac1, Os Rac1, Rac1, Os-Rac1","RAC/ROP-TYPE GTPASE 1","small GTP-binding protein 1, Rac-like GTP-binding protein 1, GTPase Rac homolog, Rice homolog of mammalian Rac-GTPase RAC1",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0005525 - GTP binding, GO:0005737 - cytoplasm, GO:0006915 - apoptosis, GO:0019898 - extrinsic to membrane, GO:0005886 - plasma membrane, GO:0002238 - response to molecule of fungal origin, GO:0007264 - small GTPase mediated signal transduction, GO:0050832 - defense response to fungus, GO:0052567 - response to defense-related host reactive oxygen species production, GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0051302 - regulation of cell division","TO:0000112 - disease resistance, TO:0000439 - fungal disease resistance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000590 - grain weight","PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009066 - anther ","Os01g0229400","LOC_Os01g12900.3, LOC_Os01g12900.2, LOC_Os01g12900.1"]
[{"$nulls":23},"Os09g0539200","Os07g0413800","Os04g0599000","Os04g0599000",-1.464856,-1.2069334,null,"Os05g0403300",3.855875,"Os06g0187200",-1.344282,{"$nulls":29},"PLS3","OsPLS3, SPL21, spl21(t), OsSPL21, OsGCNT, GCNT, OsPSL, PSL, C2GNT1, OsC2GNT1","PRECOCIOUS LEAF SENESCENCE 3","precocious leaf senescence3, beta-1, 6-N-acetylglucosaminyl transferase, spotted-leaf 21, premature senescence leaf, core 2/I branching beta-1, 6-N- acetylglucosaminyl transferase-1",12," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0006486 - protein amino acid glycosylation, GO:0009736 - cytokinin mediated signaling, GO:0009873 - ethylene mediated signaling pathway, GO:0042542 - response to hydrogen peroxide, GO:0005794 - Golgi apparatus, GO:0009694 - jasmonic acid metabolic process, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031348 - negative regulation of defense response, GO:0009735 - response to cytokinin stimulus, GO:0010150 - leaf senescence, GO:0016021 - integral to membrane, GO:0012501 - programmed cell death, GO:0042742 - defense response to bacterium, GO:0008375 - acetylglucosaminyltransferase activity","TO:0000063 - mimic response, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000605 - hydrogen peroxide content, TO:0000293 - chlorophyll-a content, TO:0000175 - bacterial blight disease resistance, TO:0000167 - cytokinin sensitivity, TO:0000249 - leaf senescence, TO:0002668 - jasmonic acid content","PO:0001054 - 4 leaf senescence stage , PO:0009047 - stem , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root ","Os12g0618800","LOC_Os12g42420.1",{"$nulls":7},"MIS2","OsCR4, CR4, OsMIS2","MINI SEED 2","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog",3," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0051302 - regulation of cell division, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0001558 - regulation of cell growth, GO:0005768 - endosome","TO:0000399 - grain thickness, TO:0000240 - sterile lemma length, TO:0002730 - grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006022 - floral organ development trait, TO:0000621 - inflorescence development trait, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os03g0637800","LOC_Os03g43670.1",{"$nulls":6},"qASS-3-1(t) (qASS-3)","qASS-3-1(t) (qASS-3)","alkali spreading score (QTL)-3-1(t)","alkali spreading score (QTL)-3-1(t)",3," Seed - Physiological traits - Taste",{"$nulls":11},"HSFB2C","HSfB2c, OsHsfB2c, OsHsf-24, HSF24, OsHSF24","HEAT STRESS TRANSCRIPTION FACTOR B2C","Heat stress transcription factor B2c, Heat stress transcription factor B-2c, Heat stress transcription factor 24",9," Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0009628 - response to abiotic stimulus, GO:0046686 - response to cadmium ion, GO:0030912 - response to deep water, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription","TO:0000259 - heat tolerance, TO:0000168 - abiotic stress trait, TO:0000524 - submergence tolerance","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root ","Os09g0526600","LOC_Os09g35790.3, LOC_Os09g35790.1, LOC_Os09g35790.2","Os03g0175600","Os07g0125000","Os07g0682000",2.7493656,0,null,"BZR1","OsBZR1, Os BZR1","BRASSINAZOLE RESISTANT 1","BRASSINAZOLE-RESISTANT1",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0080006 - internode patterning, GO:0043565 - sequence-specific DNA binding, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0009753 - response to jasmonic acid stimulus, GO:0009755 - hormone-mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0040008 - regulation of growth, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0005773 - vacuole, GO:0009741 - response to brassinosteroid stimulus, GO:0005737 - cytoplasm","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000329 - tillering ability, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000615 - abscisic acid sensitivity, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0002688 - leaf lamina joint bending","PO:0025034 - leaf , PO:0000034 - vascular system , PO:0000055 - bud ","Os07g0580500","LOC_Os07g39220.1"]
[{"$nulls":23},"Os10g0370500","Os04g0119000","Os01g0171000","Os01g0171000",1.8522482,1.0357467,null,"Os06g0142300",3.8547497,"Os12g0248600",-1.343203,{"$nulls":29},"LAS","OsLAS","LETHAL ALBINIC SEEDLING","Lethal albinic seedling",2," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0004829 - threonine-tRNA ligase activity, GO:0009570 - chloroplast stroma, GO:0005737 - cytoplasm, GO:0005739 - mitochondrion, GO:0009658 - chloroplast organization, GO:0010027 - thylakoid membrane organization, GO:0005524 - ATP binding, GO:0006435 - threonyl-tRNA aminoacylation","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait","PO:0025034 - leaf ","Os02g0538000","LOC_Os02g33500.1",{"$nulls":7},"SPH","OsLOX6, LOX6","SPLIT-HULL","lipoxygenase 6, split-hull",4," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0031408 - oxylipin biosynthetic process, GO:0016165 - lipoxygenase activity, GO:0005506 - iron ion binding","TO:0005005 - alpha-linolenic acid content, TO:0000576 - stem length, TO:0000137 - days to heading, TO:0000731 - lignin content, TO:0000565 - spikelets per panicle length, TO:0000180 - spikelet fertility, TO:0000592 - 1000-dehulled grain weight, TO:0005001 - linoleic acid content",null,"Os04g0447100","LOC_Os04g37430.1",{"$nulls":6},"qASS-6-2(t) (qASS-6a)","qASS-6-2(t) (qASS-6a)","alkali spreading score (QTL)-6-2(t)","alkali spreading score (QTL)-6-2(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"HSFB4A","HSfB4a, OsHsfB4a, OsHsf-20, HSF20, OsHSF20","HEAT STRESS TRANSCRIPTION FACTOR B4A","Heat stress transcription factor B4a, Putative heat stress transcription factor B-4a, Heat stress transcription factor 20",8," Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0030912 - response to deep water, GO:0006950 - response to stress, GO:0006350 - transcription","TO:0000524 - submergence tolerance",null,"Os08g0471000","LOC_Os08g36700.1","Os12g0563200","Os07g0537200","Os09g0524800",2.7295,0,null,"RSUS4","SUS4, SS4, OsScS4, RSs4, RSus4, OsSUS4","SUCROSE SYNTHASE 4","Rice sucrose synthase-4, Sucrose synthase 4, Sucrose-UDP glucosyltransferase 4, Sucrose synthase-4, rice SuSy gene 4",3," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016157 - sucrose synthase activity, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process, GO:0009651 - response to salt stress, GO:0051781 - positive regulation of cell division","TO:0006001 - salt tolerance, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000696 - starch content, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000011 - nitrogen sensitivity","PO:0007632 - seed maturation stage ","Os03g0340500","LOC_Os03g22120.3, LOC_Os03g22120.2, LOC_Os03g22120.1"]
[{"$nulls":23},"Os10g0437600","Os05g0332300","Os01g0113200","Os01g0113200",1.5442066,1.2218553,null,"Os09g0533900",3.8545601,"Os12g0175700",-1.3407683,{"$nulls":29},"_","OsSK23/OsGSK4, OsSK23, OsGSK4, SK23, GSK4, OsGSK3, GSK3","_","GSK3/SHAGGY-Like Kinase 23, GSK3-like Kinase 4",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0005524 - ATP binding","TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000346 - tiller number",null,"Os02g0236200","LOC_Os02g14130.1",{"$nulls":7},"IG1","CRL1L3, OsCrll3, OsIG1, OsLBD1-9, LBD1-9, OsAS2, AS2","INDETERMINATE GAMETOPHYTE 1","Crl1-like 3, indeterminate gametophyte1, lateral organ boundaries domain 1-9, ASYMMETRIC LEAVES2, ASYMMETRIC LEAVES 2",1," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009553 - embryo sac development, GO:0048437 - floral organ development, GO:0009561 - megagametogenesis, GO:0005634 - nucleus, GO:0007275 - multicellular organismal development","TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000206 - leaf angle, TO:0006038 - floral organ number","PO:0004001 - bulliform cell , PO:0007621 - megagametophyte development stage , PO:0009038 - palea , PO:0009039 - glume , PO:0025279 - megagametophyte ","Os01g0889400","LOC_Os01g66590.1, LOC_Os01g66590.2, LOC_Os01g66590.3",{"$nulls":6},"qASS-6-3(t) (qASS-6b)","qASS-6-3(t) (qASS-6b)","alkali spreading score (QTL)-6-3(t)","alkali spreading score (QTL)-6-3(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"HSFB4B","HSFB4b, OsHSFB4b, OsHsf-19, OsHSF19, rHsf12, OsHSF12, HSF12, HSF19","HEAT STRESS TRANSCRIPTION FACTOR B4B","Heat stress transcription factor B4b, Heat stress transcription factor B-4b, Heat stress transcription factor 19, Heat stress transcription factor 12",7," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0009628 - response to abiotic stimulus, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os07g0640900","LOC_Os07g44690.1","Os04g0684800","Os02g0175000","Os06g0231600",2.7285058,0,null,"PL3","OsPL3","_","PLUS3 domain-containing protein",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016593 - Cdc73/Paf1 complex, GO:0003677 - DNA binding","TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000455 - seed set percent","PO:0025034 - leaf ","Os01g0775100","LOC_Os01g56780.3, LOC_Os01g56780.2, LOC_Os01g56780.1"]
[{"$nulls":23},"Os10g0467800","Os02g0764500","Os06g0254700","Os06g0254700",2.689249,1.5088993,null,"Os03g0581400",3.8535707,"Os02g0683500",-1.3406903,{"$nulls":29},"ARP6","OsARP6","ACTIN RELATED PROTEIN 6",null,1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009910 - negative regulation of flower development, GO:0080006 - internode patterning, GO:0051726 - regulation of cell cycle, GO:0009266 - response to temperature stimulus, GO:0006970 - response to osmotic stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006952 - defense response, GO:0006338 - chromatin remodeling, GO:0008283 - cell proliferation, GO:0006950 - response to stress, GO:0005634 - nucleus, GO:0010431 - seed maturation, GO:0048316 - seed development","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000495 - chlorophyll content, TO:0000657 - spikelet anatomy and morphology trait, TO:0000485 - sterility related trait, TO:0002768 - spikelet length, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000346 - tiller number, TO:0000639 - seed fertility","PO:0009010 - seed , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0009005 - root ","Os01g0269900","LOC_Os01g16414.1, LOC_Os01g16414.4, LOC_Os01g16414.3, LOC_Os01g16414.2",{"$nulls":7},"CML3","OsCML3, OsSTA271, OsCML3m, OsCML3s","CALMODULIN-LIKE PROTEIN 3","calmodulin-like protein 3, CaM-Like 3",12," Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0019722 - calcium-mediated signaling, GO:0005634 - nucleus, GO:0005509 - calcium ion binding",null,"PO:0009066 - anther ","Os12g0132300","LOC_Os12g03816.1",{"$nulls":6},"qGC-1-1(t) (qGC-1)","qGC-1-1(t) (qGC-1)","gel consistency (QTL)-1-1(t)","gel consistency (QTL)-1-1(t)",1," Seed - Physiological traits - Taste",{"$nulls":11},"HSFB4C","HSfB4c, OsHsfB4c, OsHsf-22, HSF22, OsHSF22","HEAT STRESS TRANSCRIPTION FACTOR B4C","Heat stress transcription factor B4c, Heat stress transcription factor B-4c, Heat stress transcription factor 22",9," Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0009628 - response to abiotic stimulus, GO:0006950 - response to stress, GO:0005737 - cytoplasm, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0006350 - transcription","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os09g0455200","LOC_Os09g28200.1","Os06g0641800","Os08g0441500","Os05g0402900",2.7227898,0,null,"_","FBPase, OsFBPase, OsSBPase, SBPase","_","Fru-1, 6-bisphosphatase, sedoheptulose 1, 7-bisphosphatase",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0019253 - reductive pentose-phosphate cycle, GO:0030388 - fructose 1,6-bisphosphate metabolic process, GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0006002 - fructose 6-phosphate metabolic process, GO:0006000 - fructose metabolic process, GO:0006094 - gluconeogenesis, GO:0016791 - phosphatase activity, GO:0005986 - sucrose biosynthetic process, GO:0005737 - cytoplasm, GO:0005975 - carbohydrate metabolic process","TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0000440 - grain number per plant, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000696 - starch content, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height","PO:0025034 - leaf ","Os04g0234600","LOC_Os04g16680.1"]
[{"$nulls":23},"Os10g0493600","Os01g0618900","Os07g0108800","Os07g0108800",-2.0689209,-1.329872,null,"Os06g0335900",3.8426368,"Os04g0111900",-1.3404331,{"$nulls":29},"ACL2","OsACL2","ABAXIALLY CURLED LEAF 2","abaxially curled leaf 2",2," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000085 - leaf rolling","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os02g0536500","LOC_Os02g33330.1",{"$nulls":7},"ERF65","OsERF#065, OsERF065, OsERF65, AP2/EREBP#107, AP2/EREBP107","ETHYLENE RESPONSE FACTOR 65","ethylene response factor 65, APETALA2/ethylene-responsive element binding protein 107",7," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0048653 - anther development, GO:0005634 - nucleus","TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os07g0617000","LOC_Os07g42510.1",{"$nulls":6},"qGC-2-2(t) (qGC-2a)","qGC-2-2(t) (qGC-2a)","gel consistency (QTL)-2-2(t)","gel consistency (QTL)-2-2(t)",2," Seed - Physiological traits - Taste",{"$nulls":11},"HSFB4D","OsHsfB4d, HSfB4d, OsHsf-10, HSF10, OsHSF10","HEAT STRESS TRANSCRIPTION FACTOR B4D","Heat stress transcription factor B4d, HEAT STRESS TRANSCRIPTION FACTOR B4d, Heat stress transcription factor 10",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009628 - response to abiotic stimulus, GO:0042742 - defense response to bacterium, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000203 - bacterial leaf streak disease resistance, TO:0000168 - abiotic stress trait, TO:0000175 - bacterial blight disease resistance","PO:0009089 - endosperm , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo ","Os03g0366800","LOC_Os03g25120.1","Os07g0467200","Os02g0764700","Os04g0518100",2.710551,0,null,"PXLG1","OsPXLG1","PUTATIVE EXTRA-LARGE G PROTEIN 1","putative extra-large G protein 1",6," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger, GO:0003924 - GTPase activity, GO:0001664 - G-protein-coupled receptor binding, GO:0031683 - G-protein beta/gamma-subunit binding, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005834 - heterotrimeric G-protein complex, GO:0005525 - GTP binding","TO:0000592 - 1000-dehulled grain weight, TO:0006001 - salt tolerance, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000152 - panicle number",null,"Os06g0111400","LOC_Os06g02130.2, LOC_Os06g02130.1"]
[{"$nulls":23},"Os10g0539600","Os06g0196300","Os07g0619800","Os07g0619800",2.4554048,3.014764,null,"Os01g0759900",3.840252,"Os01g0650200",-1.3373656,{"$nulls":29},"SLL2","OsSLL2","SHALLOT-LIKE 2 ","shallot-like 2",7," Vegetative organ - Leaf",null,"TO:0000085 - leaf rolling, TO:0000316 - photosynthetic ability, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os07g0574400","LOC_Os07g38664.1",{"$nulls":7},"MFS1","ERF130, OsERF#130, OsERF130, AP2/EREBP#165, AP2/EREBP165, DLN151, OsDLN151","MULTI-FLORET SPIKELET 1","ethylene response factor 130, APETALA2/ethylene-responsive element binding protein 165, DLN repressor 151, DLN motif protein 151, MULTI-FLORET SPIKELET1",5," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0010077 - maintenance of inflorescence meristem identity, GO:0048497 - maintenance of floral organ identity, GO:0010582 - floral meristem determinacy, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity",null,"PO:0000230 - inflorescence meristem , PO:0009037 - lemma , PO:0009038 - palea , PO:0000229 - flower meristem , PO:0009036 - lodicule , PO:0009029 - stamen , PO:0009051 - spikelet ","Os05g0497200","LOC_Os05g41760.1",{"$nulls":6},"qGC-2-3(t) (qGC-2b)","qGC-2-3(t) (qGC-2b)","gel consistency (QTL)-2-3(t)","gel consistency (QTL)-2-3(t)",2," Seed - Physiological traits - Taste",{"$nulls":11},"HSFC1A","HSfC1a, OsHsfC1a, OsHsf-02, OsHSF2, HSF2, rHsf13, HSF02, HSF13","HEAT STRESS TRANSCRIPTION FACTOR C1A","Heat stress transcription factor C1a, Heat stress transcription factor C-1a, Heat stress transcription factor 2, Heat stress transcription factor 13",1," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0043565 - sequence-specific DNA binding, GO:0006350 - transcription",null,null,"Os01g0625300","LOC_Os01g43590.2, LOC_Os01g43590.1","Os11g0109900","Os06g0115400","Os11g0556400",2.710288,0,null,"PXLG2","OsPXLG2","PUTATIVE EXTRA-LARGE G PROTEIN 2","putative extra-large G protein 2",11," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0001664 - G-protein-coupled receptor binding, GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0031683 - G-protein beta/gamma-subunit binding, GO:0003924 - GTPase activity, GO:0005525 - GTP binding, GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger, GO:0005834 - heterotrimeric G-protein complex, GO:0007186 - G-protein coupled receptor protein signaling pathway","TO:0000592 - 1000-dehulled grain weight, TO:0000137 - days to heading, TO:0000455 - seed set percent, TO:0006001 - salt tolerance",null,"Os11g0206700","LOC_Os11g10050.1"]
[{"$nulls":23},"Os10g0577500","Os01g0603300","Os01g0191800","Os01g0191800",2.640411,3.9497192,null,"Os08g0473900",3.8398027,"Os08g0384500",-1.337289,{"$nulls":29},"EPF1","OsEPF1","EPIDERMAL PATTERNING FACTOR 1","epidermal patterning factor 1",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010618 - aerenchyma formation, GO:0010015 - root morphogenesis, GO:0010052 - guard cell differentiation, GO:0010374 - stomatal complex development, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0001017 - water use efficiency, TO:0000259 - heat tolerance, TO:0000522 - stomatal conductance",null,"Os04g0637300","LOC_Os04g54490.1",{"$nulls":7},"ERF141","OsERF#141, OsERF141, AP2/EREBP#019, AP2/EREBP19","ETHYLENE RESPONSE FACTOR 141","ethylene response factor 141, APETALA2/ethylene-responsive element binding protein 19",2," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009266 - response to temperature stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0010208 - pollen wall assembly, GO:0009555 - pollen development, GO:0003677 - DNA binding, GO:0048653 - anther development, GO:0006351 - transcription, DNA-dependent","TO:0000437 - male sterility, TO:0000432 - temperature response trait","PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os02g0638650","LOC_Os02g42585.1",{"$nulls":6},"qGC-6-2(t) (qGC-6a)","qGC-6-2(t) (qGC-6a)","gel consistency (QTL)-6-2(t)","gel consistency (QTL)-6-2(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"HSFC1B","OsHsfC1b, HsfC1b, HSF03, OsHsf-03, OsHSF3, HSF3, HSF11, rHsf11","HEAT STRESS TRANSCRIPTION FACTOR C1b","Heat stress transcription factor C1b, Heat stress transcription factor C-1b, Heat stress transcription factor 3",1," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os01g0733200","LOC_Os01g53220.1","Os01g0862600","Os01g0118600","Os06g0548200",2.6934898,0,null,"PXLG3","OsPXLG3","PUTATIVE EXTRA-LARGE G PROTEIN 3","putative extra-large G protein 3",12," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005834 - heterotrimeric G-protein complex, GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger, GO:0005525 - GTP binding, GO:0003924 - GTPase activity, GO:0001664 - G-protein-coupled receptor binding, GO:0031683 - G-protein beta/gamma-subunit binding, GO:0009409 - response to cold, GO:0019001 - guanyl nucleotide binding, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering","TO:0000137 - days to heading, TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000303 - cold tolerance",null,"Os12g0593000","LOC_Os12g40190.1"]
[{"$nulls":23},"Os10g0578200","Os09g0511900","Os10g0564500","Os10g0564500",1.8656765,1.4809216,null,"Os01g0861700",3.838786,"Os02g0745200",-1.3366143,{"$nulls":29},"_",null,"_",null,10," Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0003676 - nucleic acid binding","TO:0000207 - plant height, TO:0000085 - leaf rolling",null,"Os10g0558850    ",{"$nulls":8},"_","BFL1","_","BRANCHED FLORETLESS 1",7," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010074 - maintenance of meristem identity","TO:0006017 - meristem identity, TO:0000621 - inflorescence development trait",{"$nulls":9},"qGC-6-3(t) (qGC-6b)","qGC-6-3(t) (qGC-6b)","gel consistency (QTL)-6-3(t)","gel consistency (QTL)-6-3(t)",6," Seed - Physiological traits - Taste",{"$nulls":11},"HSFC2A","HSfC2a, OsHsfC2a, OsHsf-05, HSF05, OsHSF5, HSF5","HEAT STRESS TRANSCRIPTION FACTOR C2A","Heat stress transcription factor C2a, Heat stress transcription factor C-2a, Heat stress transcription factor 5",2," Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0006950 - response to stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009628 - response to abiotic stimulus, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding","TO:0000168 - abiotic stress trait, TO:0000524 - submergence tolerance","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os02g0232000","LOC_Os02g13800.1","Os06g0125200","Os08g0159500","Os04g0481700",2.6838348,0,null,"FBN1","OsFBN1","FIBRILLIN 1","fibrillin 1",9," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0005504 - fatty acid binding, GO:0006629 - lipid metabolic process, GO:0009507 - chloroplast","TO:0000448 - filled grain percentage, TO:0000152 - panicle number, TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0002668 - jasmonic acid content",null,"Os09g0133600","LOC_Os09g04790.1"]
[{"$nulls":23},"Os11g0131900","Os01g0101200","Os11g0113700","Os11g0113700",3.8011553,2.5787117,null,"Os11g0235400",3.8364632,"Os03g0188500",-1.3365221,{"$nulls":29},"_",null,"_",null,1," Biochemical character,  Vegetative organ - Leaf","GO:0016021 - integral to membrane, GO:0005802 - trans-Golgi network, GO:0005768 - endosome, GO:0008168 - methyltransferase activity","TO:0002681 - leaf curling",null,"Os01g0883900    ","LOC_Os01g66110.1, LOC_Os01g66110.2",{"$nulls":7},"_","OsWD40-48, OsSTA70","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0663300","LOC_Os02g44380.2",{"$nulls":6},"HYPRP5","qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5","HYBRID PROLINE- OR GLYCINE-RICH PROTEIN 5","low-temperature germianability (QTL)-3-1(t), hybrid proline- or glycine-rich protein 5, Hybrid Proline-Rich Protein 5",3," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009627 - systemic acquired resistance, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0009751 - response to salicylic acid stimulus, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling","TO:0000253 - seed dormancy, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000303 - cold tolerance",null,"Os03g0103300","LOC_Os03g01320.2, LOC_Os03g01320.1",{"$nulls":6},"HSFC2B","HSfC2b, OsHsfC2b, OsHsf-16, HSF16, OsHSF16","HEAT STRESS TRANSCRIPTION FACTOR C2B","Heat stress transcription factor C2b, Heat stress transcription factor C-2b, Heat stress transcription factor 16",6," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0009628 - response to abiotic stimulus, GO:0043565 - sequence-specific DNA binding, GO:0006950 - response to stress, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000168 - abiotic stress trait","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0009072 - plant ovary , PO:0009009 - plant embryo , PO:0009089 - endosperm ","Os06g0553100","LOC_Os06g35960.1","Os01g0851000","Os06g0638700","Os02g0170100",2.6468718,0,null,"LIN1","OsLIN1","LONG GRAIN 1",null,6," Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000734 - grain length, TO:0000590 - grain weight","PO:0001170 - seed development stage ","Os06g0675200","LOC_Os06g46250.1"]
[{"$nulls":23},"Os11g0184300","Os10g0529300","Os05g0382600","Os05g0382600",1.9584646,2.7545216,null,"Os06g0473000",3.8363674,"Os03g0711400",-1.3364779,{"$nulls":29},"_",null,"_",null,2," Biochemical character,  Vegetative organ - Leaf","GO:0019008 - molybdopterin synthase complex, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0003824 - catalytic activity, GO:0046872 - metal ion binding","TO:0000326 - leaf color, TO:0002681 - leaf curling",null,"Os02g0258900     ","LOC_Os02g15870.1, LOC_Os02g15870.2, LOC_Os02g15870.3, LOC_Os02g15870.4, LOC_Os02g15870.5",{"$nulls":7},"_","OsWD40-79, OsMSI1, WD40-79, MSI1","_","Multicopy suppressors of the iral 1",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0008283 - cell proliferation, GO:0048366 - leaf development, GO:0009555 - pollen development, GO:0045787 - positive regulation of cell cycle, GO:0009909 - regulation of flower development, GO:0009793 - embryonic development ending in seed dormancy, GO:0016585 - chromatin remodeling complex, GO:0006310 - DNA recombination, GO:0006349 - genetic imprinting, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010214 - seed coat development, GO:0006281 - DNA repair, GO:0031507 - heterochromatin formation, GO:0009507 - chloroplast, GO:0006351 - transcription, DNA-dependent, GO:0010026 - trichome differentiation",null,"PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0000003 - whole plant ","Os03g0640100","LOC_Os03g43890.1",{"$nulls":6},"GO","go, go1, pla3, PLA3, PLA3/GO, OsLBD3-7, LBD3-7","GOLIATH","goliath, PLASTOCHRON 3, plastochron3, PLASTOCHRON3/GOLIATH, lateral organ boundaries domain 3-7",3," Biochemical character,  Vegetative organ - Leaf,  Heterochrony,  Seed - Morphological traits - Embryo","GO:0004181 - metallocarboxypeptidase activity, GO:0004180 - carboxypeptidase activity, GO:0010081 - regulation of inflorescence meristem growth, GO:0009640 - photomorphogenesis, GO:0007275 - multicellular organismal development, GO:0009908 - flower development, GO:0009653 - anatomical structure morphogenesis, GO:0009790 - embryonic development, GO:0005634 - nucleus, GO:0010080 - regulation of floral meristem growth, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010305 - leaf vascular tissue pattern formation, GO:0005886 - plasma membrane, GO:0010229 - inflorescence development, GO:0010082 - regulation of root meristem growth, GO:0048366 - leaf development, GO:0051781 - positive regulation of cell division, GO:0006508 - proteolysis","TO:0000287 - brown rice shape, TO:0000064 - embryo related trait, TO:0000655 - leaf development trait","PO:0009009 - plant embryo , PO:0009010 - seed , PO:0001050 - leaf development stage ","Os03g0790600","LOC_Os03g57660.1, LOC_Os03g57660.2, LOC_Os03g57660.3, LOC_Os03g57660.4, LOC_Os03g57670.1",{"$nulls":6},"C3H10","OsC3H10, OsTZF8, OsCCCH-Zn-2, OsEnS-12","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 10","Zinc finger CCCH domain-containing protein 10, Tandem zinc finger protein 8, endosperm-specific gene 12",1," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003676 - nucleic acid binding, GO:0003677 - DNA binding",null,null,"Os01g0738400","LOC_Os01g53650.1","Os06g0623300","Os01g0495900","Os09g0241100",2.641684,0,null,"GSA1","OsGSA1, UGT83A1, OsUGT83A1","GRAIN SIZE AND ABIOTIC STRESS TOLERANCE 1","Grain Size and Abiotic stress tolerance 1, UDP-glucosyltransferase 83A1",3," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008194 - UDP-glycosyltransferase activity, GO:0009698 - phenylpropanoid metabolic process, GO:0010229 - inflorescence development, GO:0010600 - regulation of auxin biosynthetic process, GO:0001558 - regulation of cell growth, GO:0042127 - regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0009809 - lignin biosynthetic process, GO:0009962 - regulation of flavonoid biosynthetic process","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000657 - spikelet anatomy and morphology trait, TO:0000290 - flavonoid content, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000259 - heat tolerance, TO:0002672 - auxin content","PO:0009051 - spikelet ","Os03g0757500","LOC_Os03g55040.1"]
[{"$nulls":23},"Os11g0204600","Os03g0738400","Os02g0750200","Os02g0750200",1.835969,3.2944186,null,"Os03g0137600",3.8297756,"Os01g0706600",-1.3342406,{"$nulls":29},"USP22","OsUSP22","UNIVERSAL STRESS PROTEIN 22",null,5," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009413 - response to flooding, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009408 - response to heat, GO:0009651 - response to salt stress","TO:0000615 - abscisic acid sensitivity, TO:0002681 - leaf curling, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000507 - osmotic adjustment capacity, TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance","PO:0009005 - root , PO:0005052 - plant callus , PO:0009049 - inflorescence , PO:0009009 - plant embryo , PO:0025034 - leaf ","Os05g0170200      ","LOC_Os05g07810.1",{"$nulls":7},"_","OsWD40-183, OsSTA251","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0176000","LOC_Os11g07480.1",{"$nulls":6},"PLDalpha1","RPLD1, PLD1, OsPLDalpha1","PHOSPHOLIPASE  D ALPHA 1","Rice phospholipase D-1, Phospholipase D alpha 1, PLD alpha 1, Choline phosphatase 1, Phosphatidylcholine-hydrolyzing phospholipase D 1, phospholipase Dalpha1",1," Biochemical character,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance","GO:0070290 - NAPE-specific phospholipase D activity, GO:0009631 - cold acclimation, GO:0004630 - phospholipase D activity, GO:0005509 - calcium ion binding, GO:0050826 - response to freezing, GO:0009409 - response to cold, GO:0006654 - phosphatidic acid biosynthetic process, GO:0016042 - lipid catabolic process, GO:0016020 - membrane, GO:0046470 - phosphatidylcholine metabolic process","TO:0000379 - cool paste viscosity, TO:0000303 - cold tolerance, TO:0000196 - amylose content, TO:0000462 - gelatinization temperature, TO:0000162 - seed quality, TO:0000409 - peak viscosity, TO:0000408 - hot paste viscosity, TO:0000374 - breakdown viscosity",null,"Os01g0172400","LOC_Os01g07760.1, LOC_Os01g07760.2",{"$nulls":6},"C3H12","OsC3H12","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12","Zinc finger CCCH domain-containing protein 12, Zinc finger CCCH domain-containing protein ZFN-like 2",1," Tolerance and resistance - Disease resistance,  Other","GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0046872 - metal ion binding, GO:0008270 - zinc ion binding, GO:0009737 - response to abscisic acid stimulus","TO:0000615 - abscisic acid sensitivity",null,"Os01g0917400","LOC_Os01g68860.1, LOC_Os01g68860.2, LOC_Os01g68860.3","Os09g0487600","Os05g0208100","Os01g0281200",2.6292598,0,null,"NRFG6","OsNRFG6","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 6","neo-tetraploid rice fertility related gene 6",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0048544 - recognition of pollen","TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000152 - panicle number",null,"Os06g0602500","LOC_Os06g40030.1"]
[{"$nulls":23},"Os11g0525600","Os02g0312600","Os09g0535000","Os09g0535000",1.9154524,2.0614798,null,"Os07g0502900",3.8288524,"Os12g0541250",-1.3342371,{"$nulls":29},"_",null,"_",null,10," Vegetative organ - Leaf",null,"TO:0002681 - leaf curling, TO:0000326 - leaf color",null,"Os10g0556500       ",{"$nulls":8},"_","OsWD40-185, OsSTA253","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0187100","LOC_Os11g08400.1",{"$nulls":6},"LHS1","OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO, OsLHS1, OsLG3b, LG3b, qLGY3, LGY3, DLN80, OsDLN80","LEAFY HULL STERILE 1","MADS box gene1, leafy hull sterile1, leafy hull sterile 1, LEAFY HULL STERILE1, naked seed rice, over developed palea, MADS-box transcription factor 1, Protein LEAFY HULL STERILE 1, Protein SEPALLATA-like, abnormal floral organs, long grain 3b, DLN repressor 80, DLN motif protein 80, Oat-like rice",3," Reproductive organ - Heading date,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0042127 - regulation of cell proliferation, GO:0005515 - protein binding, GO:0005634 - nucleus, GO:0010093 - specification of floral organ identity, GO:0010582 - floral meristem determinacy, GO:0010076 - maintenance of floral meristem identity, GO:0009553 - embryo sac development, GO:0003700 - transcription factor activity, GO:0006350 - transcription, GO:0048316 - seed development, GO:0001708 - cell fate specification, GO:0009908 - flower development, GO:0045449 - regulation of transcription, GO:0048437 - floral organ development, GO:0045165 - cell fate commitment, GO:0030154 - cell differentiation, GO:0003677 - DNA binding, GO:0007275 - multicellular organismal development, GO:0010229 - inflorescence development, GO:0045595 - regulation of cell differentiation","TO:0001000 - glume cover, TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000437 - male sterility, TO:0006012 - carpel anatomy and morphology trait, TO:0000274 - floret anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000499 - flower anatomy and morphology trait, TO:0000436 - spikelet sterility, TO:0000344 - days to flower, TO:0000207 - plant height, TO:0006037 - carpel shape, TO:0006009 - lodicule anatomy and morphology trait, TO:0002659 - pistil number, TO:0006010 - lodicule number, TO:0000209 - palea number, TO:0000208 - lemma number, TO:0006029 - glume number, TO:0006038 - floral organ number, TO:0000592 - 1000-dehulled grain weight, TO:0000304 - seed thickness, TO:0000149 - seed width, TO:0000146 - seed length, TO:0000399 - grain thickness, TO:0000416 - embryosac abortion, TO:0000455 - seed set percent, TO:0000657 - spikelet anatomy and morphology trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000670 - floret number, TO:0000223 - pistil anatomy and morphology trait, TO:0000266 - chalky endosperm, TO:0000650 - lemma length, TO:0000225 - stamen number, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000397 - grain size, TO:0000377 - cooked grain elongation, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000622 - flower development trait, TO:0000245 - pollen free, TO:0000417 - lemma and palea pubescence","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009030 - carpel , PO:0009039 - glume , PO:0009046 - flower , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0001049 - lodicule development stage , PO:0001048 - palea development stage , PO:0001047 - lemma development stage , PO:0006000 - caryopsis hull , PO:0009062 - gynoecium , PO:0009029 - stamen , PO:0009010 - seed , PO:0007615 - flower development stage , PO:0009037 - lemma , PO:0009036 - lodicule , PO:0009038 - palea , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0000229 - flower meristem ","Os03g0215400","LOC_Os03g11614.1",{"$nulls":6},"C3H15","OsC3H15, OsRFPHC-3","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15","Zinc finger CCCH domain-containing protein 15, RING finger protein OsRFPHC-3, RING-HC protein 3",2," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0005515 - protein binding","TO:0000168 - abiotic stress trait",null,"Os02g0301000","LOC_Os02g19804.1","Os03g0169700","Os03g0276800","Os01g0646300",2.6251109,0,null,"KIN7L","OsKIN7L","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 7L","kinesin motor domain containing protein 7L",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement","TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000371 - yield trait",null,"Os11g0552600","LOC_Os11g35090.1"]
[{"$nulls":23},"Os11g0683500","Os08g0536300","Os03g0279950","Os03g0279950",1.6565138,3.5594528,null,"Os07g0684100",3.8254364,"Os01g0858000",-1.3340768,{"$nulls":29},"_",null,"_",null,12," Biochemical character,  Vegetative organ - Leaf","GO:0005509 - calcium ion binding, GO:0000095 - S-adenosylmethionine transmembrane transporter activity, GO:0009941 - chloroplast envelope, GO:0005743 - mitochondrial inner membrane, GO:0016021 - integral to membrane","TO:0000326 - leaf color",null,"Os12g0103000        ","LOC_Os12g01240.1",{"$nulls":7},"_","OsWD40-196, OsSTA276","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0178633","LOC_Os12g07874.1",{"$nulls":6},"LGC1","Lgc1 (LGC-1), Lgc1, LGC-1, glu1(t)*(Lgc1), glu1(t)*, glu8, Glu1","LOW GLUTELIN CONTENT 1","Low glutelin content1, Low glutelin content 1, GLUTELIN 1, lack of glutelin subunit1, lack of glutelin subunit 1, lack of glutelin subunit-1, rice glutelin-8",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":8},"EHD4","OsC3H20, C3H20, Ehd4, DLN73, DLN73a, DLN73b, OsDLN73, OsDLN73a, OsDLN73b","EARLY HEADING DATE 4","Zinc finger CCCH domain-containing protein 20, Early heading date 4, DLN repressor 73, DLN motif protein 73",3," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:2000028 - regulation of photoperiodism, flowering, GO:0009266 - response to temperature stimulus, GO:0010378 - temperature compensation of the circadian clock, GO:0007623 - circadian rhythm, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0002616 - flowering time, TO:0000432 - temperature response trait",null,"Os03g0112700","LOC_Os03g02160.3, LOC_Os03g02160.2, LOC_Os03g02160.1","Os03g0735300","Os02g0656600","Os01g0117000",2.6052525,0,null,"KIN14M","OsKIN14M","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 14M","kinesin motor domain containing protein 14M",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement, GO:0016887 - ATPase activity, GO:0008017 - microtubule binding","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight",null,"Os06g0554700","LOC_Os06g36080.1"]
[{"$nulls":23},"Os11g0701000","Os02g0296800","Os05g0438600","Os05g0438600",2.0235195,1.2552519,null,"Os01g0872600",3.825415,"Os01g0857975",-1.3340768,{"$nulls":29},"_",null,"_",null,12," Biochemical character,  Vegetative organ - Leaf","GO:0016021 - integral to membrane, GO:0006629 - lipid metabolic process, GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","TO:0000326 - leaf color",null,"Os12g0104400         ","LOC_Os12g01370.1",{"$nulls":7},"IDS1","OsIDS1, AP2/EREBP#033, AP2/EREBP33, AP2-33/IDS1, AP2-33, AP2-2, DLN104, OsDLN104","INDETERMINATE SPIKELET 1","OsINDETERMINATE SPIKELET 1, INDETERMINATE SPIKELET1, APETALA2/ethylene-responsive element binding protein 33, APETALA2-2, DLN repressor 104, DLN motif protein 104",3," Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:2000028 - regulation of photoperiodism, flowering, GO:0009908 - flower development, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010076 - maintenance of floral meristem identity, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0002616 - flowering time, TO:0000650 - lemma length, TO:0000622 - flower development trait, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000137 - days to heading","PO:0007601 - floral organ meristem development stage , PO:0007615 - flower development stage ","Os03g0818800","LOC_Os03g60430.2, LOC_Os03g60430.1",{"$nulls":6},"GAMYB","OsGAMYB, GAM1, OsGAMyb, Os-MYBGA, Os GAMYB, OsMYBGA, MYBGA","GIBBERELLIN MYB GENE","homologue to the barley Myb-like transcription factor, Transcription factor GAMYB, Gibberellin myb gene",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0042742 - defense response to bacterium, GO:0007126 - meiosis, GO:0009845 - seed germination, GO:0080006 - internode patterning, GO:0005737 - cytoplasm, GO:0045449 - regulation of transcription, GO:0003682 - chromatin binding, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0030154 - cell differentiation, GO:0003677 - DNA binding, GO:0009908 - flower development, GO:0006350 - transcription, GO:0048653 - anther development, GO:0009740 - gibberellic acid mediated signaling","TO:0000187 - anther color, TO:0000492 - leaf shape, TO:0000175 - bacterial blight disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000430 - germination rate, TO:0000437 - male sterility, TO:0000531 - anther length, TO:0000401 - plant growth hormone sensitivity, TO:0000145 - internode length","PO:0009025 - vascular leaf , PO:0000003 - whole plant , PO:0007057 - 0 seed germination stage ","Os01g0812000","LOC_Os01g59660.3, LOC_Os01g59660.1, LOC_Os01g59660.2, LOC_Os01g59660.4",{"$nulls":6},"C3H21","OsC3H21","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 21","zinc finger CCCH domain-containing protein 21",3," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding, GO:0003730 - mRNA 3'-UTR binding, GO:0046872 - metal ion binding, GO:0046688 - response to copper ion, GO:0005829 - cytosol","TO:0000021 - copper sensitivity",null,"Os03g0301500","LOC_Os03g18950.1","Os04g0665600","Os06g0695600","Os11g0135000",2.602723,0,null,"TBP2.2","OsTBP2.2","TATA-BOX BINDING PROTEIN 2.2","TATA-box binding protein 2.2",10," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006352 - transcription initiation, GO:0008134 - transcription factor binding, GO:0000978 - RNA polymerase II regulatory transcription factor site sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009414 - response to water deprivation, GO:0015979 - photosynthesis, GO:0043531 - ADP binding, GO:0009699 - phenylpropanoid biosynthetic process, GO:0000165 - MAPKKK cascade, GO:0003677 - DNA binding, GO:0006366 - transcription from RNA polymerase II promoter, GO:0006952 - defense response","TO:0001018 - transpiration rate, TO:0001015 - photosynthetic rate, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000552 - shoot dry weight, TO:0000522 - stomatal conductance, TO:0001017 - water use efficiency","PO:0025034 - leaf , PO:0009047 - stem ","Os10g0432300","LOC_Os10g29660.2"]
[{"$nulls":23},"Os12g0131100","Os03g0333400","Os01g0966200","Os01g0966200",1.8069844,2.4977853,null,"Os01g0937500",3.8233378,"Os05g0107900",-1.3337746,{"$nulls":29},"_",null,"_",null,12," Vegetative organ - Leaf","GO:0048366 - leaf development","TO:0000655 - leaf development trait",null,"Os12g0104733         ",{"$nulls":8},"MIR172A","OsmiR172a, miR172a, osa-MIR172a, Osa-miR172a","MICRORNA172A","rice microRNA172a",9," Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0048506 - regulation of timing of meristematic phase transition, GO:0035195 - gene silencing by miRNA, GO:0050832 - defense response to fungus","TO:0006029 - glume number, TO:0000074 - blast disease, TO:0000420 - fertility related trait, TO:0000650 - lemma length","PO:0000229 - flower meristem , PO:0025395 - floral organ ",{"$nulls":8},"REB","OsZIP33, RISBZ2, OsbZIP33","ENDOSPERM BZIP","rice endosperm bZIP, bZIP transcription factor 33, rice seed b-Zipper 2, b-ZIP transcription factor 33",3," Seed - Morphological traits - Endosperm","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity",null,null,"Os03g0796900","LOC_Os03g58250.1",{"$nulls":6},"C3H23","OsC3H23","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 23","Zinc finger CCCH domain-containing protein 23",3," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0030912 - response to deep water, GO:0003723 - RNA binding, GO:0008270 - zinc ion binding, GO:0000166 - nucleotide binding","TO:0000524 - submergence tolerance",null,"Os03g0329200","LOC_Os03g21160.1, LOC_Os03g21160.2","Os03g0857500","Os06g0203800","Os01g0106400",2.5819397,0,null,"NLP4","OsNLP4, NLP4.1, NLP4.2","NIN-LIKE PROTEIN 4","NLP transcription factor 4, NODULE INCEPTION-like protein 4, NIN-like protein 4",9," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010167 - response to nitrate, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0048364 - root development, GO:0009610 - response to symbiotic fungus, GO:0009620 - response to fungus, GO:0019740 - nitrogen utilization, GO:0060359 - response to ammonium ion, GO:0042594 - response to starvation, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000303 - cold tolerance, TO:0001019 - root to total biomass ratio, TO:0000442 - plant fresh weight, TO:0000578 - root fresh weight, TO:0001013 - lateral root number, TO:0001012 - lateral root length, TO:0000227 - root length, TO:0000084 - root number, TO:0000656 - root development trait, TO:0000571 - shoot fresh weight, TO:0000449 - grain yield per plant, TO:0000371 - yield trait","PO:0007022 - seed imbibition stage , PO:0007520 - root development stage , PO:0009005 - root ","Os09g0549450","LOC_Os09g37710.1, LOC_Os09g37710.2"]
[{"$nulls":23},"Os12g0169600","Os02g0702600","Os10g0461400","Os10g0461400",2.50424,2.099097,null,"Os01g0150900",3.8204863,"Os10g0557700",-1.3321929,{"$nulls":29},"TRZ2","OsaTRZ2, OsTRZ2","TRNASE Z2 ","tRNase Z2",9," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0006351 - transcription, DNA-dependent, GO:0042793 - transcription from plastid promoter, GO:0009409 - response to cold, GO:0042781 - 3'-tRNA processing endoribonuclease activity","TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000303 - cold tolerance, TO:0002714 - plastid development trait","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0000003 - whole plant , PO:0020104 - leaf sheath ","Os09g0482680","LOC_Os09g30466.1",{"$nulls":7},"MIR172B","OsmiR172b, miR172b, osa-MIR172b, Osa-miR172b","MICRORNA172B","rice microRNA172b",1," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA","TO:0000429 - salt sensitivity, TO:0000650 - lemma length",{"$nulls":9},"SHP1","shp1","SHOOT POSITION-1","shoot position1, shoot position-1",null," Seed - Morphological traits - Embryo","GO:0009887 - organ morphogenesis, GO:0009888 - tissue development",{"$nulls":10},"C3H24","OsC3H24, OsTZF3, TZF3, OsCCCH-Zn-8, CCCH-Zn-8","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 24","Zinc finger CCCH domain-containing protein 24, Tandem zinc finger protein 3",3," Tolerance and resistance - Disease resistance,  Other","GO:0003677 - DNA binding, GO:0051607 - defense response to virus, GO:0008270 - zinc ion binding","TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance",null,"Os03g0698800","LOC_Os03g49170.1, LOC_Os03g49170.3","Os01g0131900","Os04g0545000","Os06g0700700",2.5539284,0,null,"PQT3","OsPQT3","PARAQUAT TOLERANCE 3",null,10," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006979 - response to oxidative stress, GO:0009628 - response to abiotic stimulus, GO:0009651 - response to salt stress, GO:0009635 - response to herbicide, GO:0003676 - nucleic acid binding, GO:0008270 - zinc ion binding, GO:0006397 - mRNA processing","TO:0006001 - salt tolerance, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000058 - herbicide sensitivity, TO:0002657 - oxidative stress, TO:0000168 - abiotic stress trait, TO:0000396 - grain yield",null,"Os10g0431000","LOC_Os10g29560.1"]
[{"$nulls":23},"Os12g0170600","Os06g0713000","Os08g0504500","Os08g0504500",2.6450891,2.366072,null,"Os01g0723500",3.8162727,"Os03g0690500",-1.3304685,{"$nulls":29},"SAC1","OsSAC1","SUGAR ACCUMULATION 1","sugar accumulation 1",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0005783 - endoplasmic reticulum, GO:0016021 - integral to membrane","TO:0000207 - plant height, TO:0001015 - photosynthetic rate, TO:0000328 - sucrose content, TO:0000696 - starch content, TO:0000557 - secondary branch number, TO:0000495 - chlorophyll content, TO:0000300 - glucose content, TO:0000339 - stem thickness, TO:0000333 - sugar content, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000326 - leaf color, TO:0000547 - primary branch number, TO:0000180 - spikelet fertility","PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os07g0116300","LOC_Os07g02520.1",{"$nulls":7},"_","OsCOI1b, COI1b, OsCOI1H, COI1H, OsFbox260, Fbox260, Os_F0646","_","coronatine insensitive 1b, F-box protein 260",5," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010218 - response to far red light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009909 - regulation of flower development, GO:0010118 - stomatal movement, GO:0010150 - leaf senescence, GO:0009754 - detection of jasmonic acid stimulus, GO:0080027 - response to herbivore, GO:0009625 - response to insect, GO:0002213 - defense response to insect, GO:0009641 - shade avoidance, GO:0019005 - SCF ubiquitin ligase complex, GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0031348 - negative regulation of defense response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding","TO:0000396 - grain yield, TO:0000172 - jasmonic acid sensitivity, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000031 - silicon sensitivity, TO:0002712 - stay green trait, TO:0000424 - brown planthopper resistance, TO:0000261 - insect damage resistance, TO:0000298 - chlorophyll ratio, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility","PO:0001054 - 4 leaf senescence stage ","Os05g0449500","LOC_Os05g37690.1",{"$nulls":6},"BRD1","brd1, OsDWARF, DWARF, OsBR6ox, BR6ox, CYP85A1, CYP85A4, OsDWF, CYP85A1/OsDWARF, OsBRD1, OsCYP85A1","BRASSINOSTEROID-DEFICIENT DWARF 1","brassinosteroid-dependent1, brassinosteroid-dependent 1, brassinosteroid-deficient dwarf1, brassinosteroid-deficient dwarf 1, Cytochrome P450 85A1, C6-oxidase, BR-6-oxidase, Dwarf protein, cytochrome P450 CYP85A4, brassinosteroid deficient1, BR-deficient dwarf1, BR-deficient dwarf 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005506 - iron ion binding, GO:0080113 - regulation of seed growth, GO:0007275 - multicellular organismal development, GO:0009719 - response to endogenous stimulus, GO:0055114 - oxidation reduction, GO:0009647 - skotomorphogenesis, GO:0022900 - electron transport chain, GO:0016020 - membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0007165 - signal transduction, GO:0016132 - brassinosteroid biosynthetic process, GO:0020037 - heme binding, GO:0001578 - microtubule bundle formation, GO:0009637 - response to blue light, GO:0016021 - integral to membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0010268 - brassinosteroid homeostasis, GO:0009753 - response to jasmonic acid stimulus, GO:0004497 - monooxygenase activity, GO:0009055 - electron carrier activity, GO:0060359 - response to ammonium ion","TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000642 - leaf sheath diameter, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000085 - leaf rolling, TO:0000370 - leaf width, TO:0000159 - blue light sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000227 - root length, TO:0002676 - brassinosteroid content, TO:0000391 - seed size, TO:0000576 - stem length, TO:0002688 - leaf lamina joint bending, TO:0000492 - leaf shape, TO:0000145 - internode length","PO:0001031 - 4 root elongation stage ","Os03g0602300","LOC_Os03g40540.1",{"$nulls":6},"C3H32","OsC3H32","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32","Zinc finger CCCH domain-containing protein 32",4," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0008270 - zinc ion binding, GO:0009738 - abscisic acid mediated signaling, GO:0009628 - response to abiotic stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000168 - abiotic stress trait",null,"Os04g0671800","LOC_Os04g57600.1","Os08g0553800","Os06g0728000","Os04g0610800",2.5458188,0,null,"TAC4","OsTAC4","TILLER ANGLE CONTROL 4","Tiller Angle Control 4",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009630 - gravitropism, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009826 - unidimensional cell growth","TO:0000567 - tiller angle, TO:0000447 - filled grain number, TO:0000145 - internode length, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002693 - gravity response trait, TO:0002672 - auxin content, TO:0000547 - primary branch number, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0000040 - panicle length","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0008017 - leaf sheath pulvinus , PO:0020148 - shoot apical meristem , PO:0000232 - axillary bud meristem ","Os02g0450000","LOC_Os02g25230.1"]
[{"$nulls":23},"Os12g0274700","Os03g0368900","Os09g0411650","Os09g0411650",1.0380474,1.2457805,null,"Os11g0142400",3.8162632,"Os05g0442550",-1.3304685,{"$nulls":29},"NCA1B","OsNCA1b, NCA1b","NO CATALASE ACTIVITY 1B",null,2," Vegetative organ - Leaf",null,"TO:0000326 - leaf color","PO:0025034 - leaf ","Os02g0795300","LOC_Os02g55200.1, LOC_Os02g55200.2",{"$nulls":7},"TAB1","Os WUS, WUS, OsWOX1, WOX1, OsWUS, OsTAB, TAB1/WUS, MOC3, MOC3/OsWUS, SRT1, MOC3/TAB1/SRT1, DC1, OsDC1","TILLERS ABSENT 1","WUSCHEL, WUSCHEL-related homeobox 1, WUSCHEL-LIKE HOMEOBOX 1, WUS Orthologue, TILLERS ABSENT1, MONOCULM 3, completely sterile and reduced tillering 1, decreased culm number 1",4," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009735 - response to cytokinin stimulus, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0048507 - meristem development, GO:0007275 - multicellular organismal development, GO:0009733 - response to auxin stimulus, GO:0010229 - inflorescence development","TO:0000163 - auxin sensitivity, TO:0002660 - cytokinin content, TO:0000276 - drought tolerance, TO:0000152 - panicle number, TO:0000329 - tillering ability, TO:0000621 - inflorescence development trait, TO:0000436 - spikelet sterility, TO:0000456 - spikelet number, TO:0000215 - stamen anatomy and morphology trait, TO:0000180 - spikelet fertility, TO:0000346 - tiller number, TO:0000657 - spikelet anatomy and morphology trait, TO:0000358 - female sterility, TO:0000223 - pistil anatomy and morphology trait, TO:0000661 - tiller bud dormancy","PO:0001083 - inflorescence development stage , PO:0007073 - 2 formation of axillary shoot stage ","Os04g0663600","LOC_Os04g56780.1",{"$nulls":6},"qLT-8","qLT-8","luster (QTL)-8","luster (QTL)-8",8," Seed - Morphological traits - Endosperm",{"$nulls":11},"C3H33","OsC3H33, OsTZF5, TZF5, OsCCCH-Zn-5, CCCH-Zn-5","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33","Zinc finger CCCH domain-containing protein 33, Tandem zinc finger protein 5",5," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0009651 - response to salt stress, GO:0008270 - zinc ion binding, GO:0005737 - cytoplasm, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0030912 - response to deep water","TO:0000357 - growth and development trait, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0001016 - relative chlorophyll content, TO:0000524 - submergence tolerance, TO:0000303 - cold tolerance, TO:0000396 - grain yield, TO:0000615 - abscisic acid sensitivity, TO:0000136 - relative water content","PO:0009049 - inflorescence , PO:0009005 - root , PO:0025034 - leaf ","Os05g0128200","LOC_Os05g03760.1","Os02g0220400","Os01g0617900","Os03g0780800",2.5441794,0,null,"SYF2","OsSYF2","SYNTHETIC LETHAL WITH CDC FORTY 2","Synthetic lethal with cdc forty 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0071014 - post-mRNA release spliceosomal complex, GO:0071013 - catalytic step 2 spliceosome, GO:0010229 - inflorescence development, GO:0010468 - regulation of gene expression, GO:0006397 - mRNA processing, GO:0080050 - regulation of seed development","TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000050 - inflorescence branching, TO:0000040 - panicle length, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002730 - grain shape","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os06g0711600","LOC_Os06g49740.2, LOC_Os06g49740.1"]
[{"$nulls":23},"Os12g0297500","Os01g0878900","Os01g0228600","Os01g0228600",1.0998325,1.4682945,null,"Os02g0324400",3.8157308,"Os03g0721400",-1.3303747,{"$nulls":29},"WLS5","OsWLS5","WEAKNESS AND LEAF SENESCENCE 5","weakness and leaf senescence5",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0008283 - cell proliferation, GO:0009826 - unidimensional cell growth, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling","TO:0000040 - panicle length, TO:0002675 - gibberellic acid content, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000566 - stomatal frequency, TO:0000495 - chlorophyll content, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os05g0141050","LOC_Os05g04900.1",{"$nulls":7},"_","OsAAE3, AAE3, OsOCS, OCS, 4CL","_","Acyl-Activating Enzyme 3, adenosine monophosphate binding protein 3, acyl activation enzyme 3, oxalyl-CoA synthetase",4," Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009507 - chloroplast, GO:0046686 - response to cadmium ion, GO:0048046 - apoplast, GO:0010214 - seed coat development, GO:0010044 - response to aluminum ion, GO:0010030 - positive regulation of seed germination, GO:0009910 - negative regulation of flower development, GO:0009908 - flower development, GO:0003824 - catalytic activity, GO:0009809 - lignin biosynthetic process, GO:0005737 - cytoplasm, GO:0009735 - response to cytokinin stimulus, GO:0009570 - chloroplast stroma, GO:0009506 - plasmodesma, GO:0005829 - cytosol, GO:0012501 - programmed cell death, GO:0033611 - oxalate catabolic process, GO:0042742 - defense response to bacterium, GO:0042743 - hydrogen peroxide metabolic process, GO:0050203 - oxalate-CoA ligase activity, GO:0050832 - defense response to fungus, GO:0009718 - anthocyanin biosynthetic process","TO:0000605 - hydrogen peroxide content, TO:0000731 - lignin content, TO:0000432 - temperature response trait, TO:0000080 - micronutrient sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000420 - fertility related trait, TO:0000622 - flower development trait","PO:0006016 - leaf epidermis , PO:0007615 - flower development stage ","Os04g0683700","LOC_Os04g58710.1",{"$nulls":6},"qTD-6","qTD-6","tenderness (QTL)-6","tenderness (QTL)-6",6," Seed - Morphological traits - Endosperm",{"$nulls":11},"C3H35","OsC3H35, OsTZF1, OsCCCH-Zn-3","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 35","Zinc finger CCCH domain-containing protein 35, Protein DELAY OF THE ONSET OF SENESCENCE-like, Tandem zinc finger protein 1",5," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0008270 - zinc ion binding",null,null,"Os05g0195200","LOC_Os05g10670.1","Os02g0635000","Os06g0194900","Os09g0127300",2.5347009,0,null,"TIF1","OsTIF1","TAA1 TRANSCRIPTIONAL INHIBITION FACTOR 1","TAA1 transcriptional inhibition factor 1",4," Seed,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0005783 - endoplasmic reticulum, GO:0010252 - auxin homeostasis, GO:0010600 - regulation of auxin biosynthetic process, GO:0009733 - response to auxin stimulus, GO:0010154 - fruit development","TO:0002672 - auxin content, TO:0000163 - auxin sensitivity","PO:0001002 - fruit development stage ","Os04g0115500","LOC_Os04g02510.1"]
[{"$nulls":24},"Os06g0107700","Os01g0743400","Os01g0743400",2.0037658,2.165901,null,"Os04g0677650",3.8149223,"Os12g0156400",-1.3301319,{"$nulls":29},"LIP1","OsLIP1","LC3-INTERACTING PROTEIN 1","LC3-interacting protein 1",10," Vegetative organ - Leaf","GO:0046872 - metal ion binding, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0010252 - auxin homeostasis","TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os10g0520700","LOC_Os10g37640.2, LOC_Os10g37640.1",{"$nulls":7},"_","OsTCP10, OsSTA77, TCP10, STA77","_","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 10",2," Reproductive organ - Spikelet, flower, glume, awn","GO:0009507 - chloroplast, GO:0005739 - mitochondrion, GO:0005634 - nucleus",null,"PO:0009066 - anther , PO:0001016 - L mature pollen stage ",null,"LOC_Os02g51310",{"$nulls":6},"qTD-8","qTD-8","tenderness (QTL)-8","tenderness (QTL)-8",8," Seed - Morphological traits - Endosperm",{"$nulls":11},"C3H37","OsC3H37, OsTZF7, OsCCCH-Zn-1","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 37","Zinc finger CCCH domain-containing protein 37, Tandem zinc finger protein 7",5," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding",null,null,"Os05g0525900","LOC_Os05g45020.1","Os06g0472000","Os02g0218600","Os07g0628500",2.5202627,0,null,"KEAP1","OsKEAP1","KELCH-LIKE ECH-ASSOCIATED PROTEIN 1","Kelch-like ECH-associated protein 1",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0051775 - response to redox state, GO:0009845 - seed germination, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000440 - grain number per plant, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000437 - male sterility, TO:0000615 - abscisic acid sensitivity, TO:0002730 - grain shape, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000430 - germination rate","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage ","Os01g0162500","LOC_Os01g06890.1"]
[{"$nulls":24},"Os12g0274700","Os02g0623500","Os02g0623500",0.9540884,1.184189,null,"Os01g0323300",3.810583,"Os12g0556200",-1.329944,{"$nulls":29},"FLA","UBP4-5, OsUBP4-5, OsUBP5, UBP5, OsFLA","FLOWER AND LEAF COLOR ABERRANT","ubiquitin-specific processing protease 4-5, flower and leaf color aberrant, Ubiquitin-specific protease 5",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0048437 - floral organ development, GO:0048439 - flower morphogenesis, GO:0009658 - chloroplast organization, GO:0009908 - flower development, GO:0004843 - ubiquitin-specific protease activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0009555 - pollen development, GO:0016579 - protein deubiquitination","TO:0000072 - awn length, TO:0000495 - chlorophyll content, TO:0000622 - flower development trait, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000455 - seed set percent, TO:0000209 - palea number, TO:0000734 - grain length, TO:0000614 - lemma shape","PO:0025060 - lamina , PO:0007615 - flower development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009038 - palea , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os11g0473200","LOC_Os11g28360.1",{"$nulls":7},"REP1","OsTCP24, REP1, TCP24, SDP1, SDP1/REP1, OsTb2, Tb2","RETARDED PALEA 1","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 24, RETARDED PALEA1, SMALL DEGENERATIVE PALEA 1, Teosinte branched 2",9," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus","TO:0000329 - tillering ability, TO:0000346 - tiller number","PO:0020141 - stem node ","Os09g0410500","LOC_Os09g24480.1",{"$nulls":6},"qIVOE-8","qIVOE-8","integrated value of organoleptic evaluation (QTL)-8","integrated value of organoleptic evaluation (QTL)-8",8," Seed - Morphological traits - Endosperm",{"$nulls":11},"C3H41","OsC3H41, MKRN","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 41","E3 ubiquitin-protein ligase makorin, Zinc finger CCCH domain-containing protein 41",6," Tolerance and resistance - Stress tolerance,  Other","GO:0016874 - ligase activity, GO:0008270 - zinc ion binding, GO:0005515 - protein binding, GO:0003677 - DNA binding, GO:0019941 - modification-dependent protein catabolic process, GO:0046685 - response to arsenic",null,null,"Os06g0318700","LOC_Os06g21390.1, LOC_Os06g21390.2, LOC_Os06g21390.3, LOC_Os06g21390.4","Os05g0519600","Os01g0507000","Os02g0753000",2.5184875,0,null,"CHZ1","OsChz1","Chaperone for H2A.Z-H2B 1","CHZ-domain protein 1",null," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0006325 - chromatin organization, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0048587 - regulation of short-day photoperiodism, flowering","TO:0000397 - grain size, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os11g0544600","LOC_Os11g34190.1"]
[{"$nulls":24},"Os11g0242800","Os03g0146400","Os03g0146400",-2.0158217,-1.6110601,null,"Os09g0250300",3.8096132,"Os07g0108800",-1.329872,{"$nulls":29},"SG1","OsSG1, OsSG1-1, OsSG1-2, OsSG1-3, GSH1, OsGSH1","STAY-GREEN 1","stay-green 1",7," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0006750 - glutathione biosynthetic process, GO:0004357 - glutamate-cysteine ligase activity, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009507 - chloroplast","TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000303 - cold tolerance",null,"Os07g0462000","LOC_Os07g27790.1",{"$nulls":7},"MIR164C","miR164c, osa-miR164c","MICRORNA164C","MICRORNA164c, osa-miRNA164c",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0048366 - leaf development, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0010199 - organ boundary specification between lateral organs and the meristem","TO:0000437 - male sterility, TO:0000207 - plant height, TO:0000202 - germination ratio, TO:0000345 - seed viability, TO:0000655 - leaf development trait, TO:0000225 - stamen number","PO:0001050 - leaf development stage ",{"$nulls":8},"qAC-8","qAC-8","amylose content (QTL)-8","amylose content (QTL)-8",8," Seed - Morphological traits - Endosperm",{"$nulls":11},"C3H50","OsC3H50, OsTZF6, OsCCCH-Zn-6, DLN188, OsDLN188","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 50","Zinc finger CCCH domain-containing protein 50, Protein ZF, Tandem zinc finger protein 6, DLN repressor 188, DLN motif protein 188",7," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os07g0568300","LOC_Os07g38090.2, LOC_Os07g38090.1","Os08g0566600","Os02g0467000","Os08g0137400",2.5007548,0,null,"RLR1","OsRLR1","RPM1-LIKE RESISTANCE GENE 1","RPM1-like resistance gene 1",10," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0009626 - plant-type hypersensitive response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0031349 - positive regulation of defense response, GO:0005524 - ATP binding","TO:0000040 - panicle length, TO:0000112 - disease resistance, TO:0002759 - grain number, TO:0000357 - growth and development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os10g0163040","LOC_Os10g07978.2, LOC_Os10g07978.1"]
[{"$nulls":24},"Os08g0562100","Os04g0405800","Os04g0405800",-1.135388,-0.9639279,null,"Os05g0552700",3.8093598,"Os05g0156300",-1.3293839,{"$nulls":29},"CNX6","OsCNX6","CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 6","cofactor for nitrate reductase and xanthine dehydrogenase 6",2," Biochemical character,  Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009688 - abscisic acid biosynthetic process, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0048623 - seed germination on parent plant, GO:0019008 - molybdopterin synthase complex, GO:0005829 - cytosol, GO:0032324 - molybdopterin cofactor biosynthetic process, GO:0030366 - Mo-molybdopterin synthase activity, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process","TO:0000095 - osmotic response sensitivity, TO:0000370 - leaf width, TO:0000253 - seed dormancy, TO:0006001 - salt tolerance, TO:0002661 - seed maturation, TO:0000492 - leaf shape","PO:0007057 - 0 seed germination stage , PO:0007632 - seed maturation stage , PO:0009010 - seed ","Os02g0140300","LOC_Os02g04740.1",{"$nulls":7},"MIR396D","miR396d, osa-miR396d, osa-MIR396d","MICRORNA396D","MICRORNA396d, osa-miRNA396d",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0009409 - response to cold, GO:0046686 - response to cadmium ion, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000240 - sterile lemma length, TO:0006022 - floral organ development trait, TO:0000303 - cold tolerance",{"$nulls":9},"GRF1","OsGRF1","GROWTH-REGULATING FACTOR 1","growth-regulating factor1",2," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0048366 - leaf development, GO:0009411 - response to UV, GO:0009741 - response to brassinosteroid stimulus, GO:0009733 - response to auxin stimulus, GO:0016563 - transcription activator activity, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002637 - leaf size, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000492 - leaf shape, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000160 - UV light sensitivity, TO:0006001 - salt tolerance, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009009 - plant embryo , PO:0000017 - vascular leaf primordium , PO:0020148 - shoot apical meristem ","Os02g0776900","LOC_Os02g53690.1",{"$nulls":6},"C3H54","OsC3H54","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54","Zinc finger CCCH domain-containing protein 54",8," Tolerance and resistance - Stress tolerance,  Other","GO:0007623 - circadian rhythm, GO:0008270 - zinc ion binding, GO:0003677 - DNA binding, GO:0003723 - RNA binding, GO:0009266 - response to temperature stimulus, GO:0000166 - nucleotide binding, GO:0010378 - temperature compensation of the circadian clock","TO:0000432 - temperature response trait",null,"Os08g0126700","LOC_Os08g03310.6, LOC_Os08g03310.5, LOC_Os08g03310.4, LOC_Os08g03310.1, LOC_Os08g03310.2, LOC_Os08g03310.3","Os06g0114200","Os11g0264300","Os01g0348900",2.48484,0,null,"_",null,"_",null,1," Biochemical character,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004190 - aspartic-type endopeptidase activity","TO:0000456 - spikelet number","PO:0009049 - inflorescence , PO:0009030 - carpel ","Os01g0140100","LOC_Os01g04710.1"]
[{"$nulls":24},"Os07g0558400","Os05g0517500","Os05g0517500",1.8454285,1.7070465,null,"Os01g0728700",3.8057644,"Os01g0653800",-1.3292699,{"$nulls":29},"CNX1","OsCNX1","CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 1","cofactor for nitrate reductase and xanthine dehydrogenase 1",4," Biochemical character,  Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy","GO:0032324 - molybdopterin cofactor biosynthetic process, GO:0009688 - abscisic acid biosynthetic process, GO:0009845 - seed germination, GO:0048623 - seed germination on parent plant, GO:0005829 - cytosol, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process, GO:0030366 - Mo-molybdopterin synthase activity, GO:0005524 - ATP binding, GO:0030151 - molybdenum ion binding, GO:0008940 - nitrate reductase activity, GO:0009734 - auxin mediated signaling pathway, GO:0010038 - response to metal ion","TO:0002661 - seed maturation, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000253 - seed dormancy",null,"Os04g0661600","LOC_Os04g56620.2, LOC_Os04g56620.1",{"$nulls":7},"MIR2118B","miR2118b, osa-miR2118b, osa-MIR2118b","MICRORNA2118B","MICRORNA2118b, osa-miRNA2118b",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048653 - anther development, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"MADS18","OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28","MADS BOX GENE 18","MADS box gene18, MADS-box transcription factor 18, MADS-box protein 2, MADS-box protein 28",7," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048830 - adventitious root development, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0005515 - protein binding, GO:0045449 - regulation of transcription, GO:0010029 - regulation of seed germination, GO:0043565 - sequence-specific DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0030154 - cell differentiation, GO:0010093 - specification of floral organ identity, GO:0009908 - flower development, GO:0005886 - plasma membrane","TO:0002616 - flowering time, TO:0000430 - germination rate, TO:0000266 - chalky endosperm, TO:0000207 - plant height, TO:0000622 - flower development trait, TO:0000576 - stem length, TO:0000615 - abscisic acid sensitivity, TO:0006032 - panicle size, TO:0000180 - spikelet fertility, TO:0000145 - internode length, TO:0000346 - tiller number","PO:0000042 - shoot-borne root , PO:0006215 - leaf aerenchyma , PO:0009082 - spikelet floret , PO:0000229 - flower meristem , PO:0009001 - fruit , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0007057 - 0 seed germination stage , PO:0007615 - flower development stage ","Os07g0605200","LOC_Os07g41370.2, LOC_Os07g41370.1",{"$nulls":6},"ZFP245","OsZFP245, DLN192, OsDLN192","ZINC FINGER PROTEIN 245","zinc finger protein ZFP245, DLN repressor 192, DLN motif protein 192",7," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding, GO:0009414 - response to water deprivation, GO:0046872 - metal ion binding, GO:0009738 - abscisic acid mediated signaling, GO:0006979 - response to oxidative stress, GO:0009409 - response to cold","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress",null,"Os07g0588700","LOC_Os07g39970.1","Os07g0247100","Os03g0146100","Os12g0115700",2.4840095,0,null,"RIP11.2","OsjRIP11.2, nuRIP, OsnuRIP","RIBOSOME-INACTIVATING PROTEIN 11.2","Ribosome-inactivating protein 11.2",11," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0005829 - cytosol","TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000227 - root length, TO:0000576 - stem length",null,"Os11g0164000","LOC_Os11g06460.1"]
[{"$nulls":24},"Os05g0491200","Os07g0485400","Os07g0485400",1.8064531,1.5241178,null,"Os01g0525800",3.8055165,"Os01g0852900",-1.3285623,{"$nulls":29},"GRF7","OsGRF7","GROWTH-REGULATING FACTOR 7","growth-regulating factor7",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0009683 - indoleacetic acid metabolic process, GO:0009739 - response to gibberellin stimulus, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009685 - gibberellin metabolic process, GO:0009845 - seed germination","TO:0000357 - growth and development trait, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000206 - leaf angle, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000476 - growth hormone content, TO:0002675 - gibberellic acid content, TO:0000396 - grain yield, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease","PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0009009 - plant embryo , PO:0005004 - shoot node , PO:0020142 - stem internode , PO:0007057 - 0 seed germination stage ","Os12g0484900","LOC_Os12g29980.2, LOC_Os12g29980.1",{"$nulls":7},"MIR2118C","miR2118c, osa-miR2118c, osa-MIR2118c","MICRORNA2118C","MICRORNA2118c, osa-miRNA2118c",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035195 - gene silencing by miRNA, GO:0048653 - anther development, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex","TO:0000358 - female sterility, TO:0000437 - male sterility","PO:0001004 - anther development stage ",{"$nulls":8},"FST ","OsMADS29, MADS29, OsFST","FEMALE-STERILE ","MADS box gene29, MADS-box transcription factor 29",2," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Seed - Morphological traits - Endosperm,  Character as QTL - Yield and productivity,  Other","GO:0010229 - inflorescence development, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0010600 - regulation of auxin biosynthetic process, GO:0010252 - auxin homeostasis, GO:0009960 - endosperm development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0048481 - ovule development, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009755 - hormone-mediated signaling, GO:0009790 - embryonic development","TO:0000620 - embryo development trait, TO:0000358 - female sterility, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0002672 - auxin content, TO:0000476 - growth hormone content, TO:0000163 - auxin sensitivity, TO:0000621 - inflorescence development trait","PO:0001002 - fruit development stage , PO:0007619 - ovule development stage , PO:0007633 - endosperm development stage , PO:0007631 - plant embryo stage , PO:0001083 - inflorescence development stage ","Os02g0170300","LOC_Os02g07430.1",{"$nulls":6},"ZFP252","RZF71, DLN263, OsDLN263","ZINC FINGER PROTEIN 252","DLN repressor 263, DLN motif protein 263",12," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0003677 - DNA binding","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os12g0583700","LOC_Os12g39400.1","Os04g0508800","Os06g0217300","Os09g0365900",2.4783297,0,null,"LARGE2","OsLARGE2, OsUPL2, UPL2","UBIQUITIN PROTEIN LIGASE 2","Ubiquitin Protein Ligase 2",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0005737 - cytoplasm, GO:0000209 - protein polyubiquitination, GO:0016567 - protein ubiquitination, GO:0010073 - meristem maintenance, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0045732 - positive regulation of protein catabolic process","TO:0000339 - stem thickness, TO:0002759 - grain number, TO:0006032 - panicle size, TO:0000370 - leaf width","PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0428600","LOC_Os12g24080.1"]
[{"$nulls":24},"Os04g0249500","Os09g0436500","Os09g0436500",1.8317684,1.6960701,null,"Os11g0113700",3.8011553,"Os08g0366000",-1.3273716,{"$nulls":29},"WSL6","OsWSL6","WHITE STRIPE LEAF 6","white stripe leaf6",5," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009658 - chloroplast organization, GO:0042644 - chloroplast nucleoid, GO:0042254 - ribosome biogenesis, GO:0006364 - rRNA processing, GO:0003723 - RNA binding, GO:0005525 - GTP binding","TO:0002715 - chloroplast development trait, TO:0000069 - variegated leaf",null,"Os05g0567300","LOC_Os05g49220.2, LOC_Os05g49220.1",{"$nulls":7},"MIR2118D","miR2118d, osa-miR2118d, osa-MIR2118d","MICRORNA2118D","MICRORNA2118d, osa-miRNA2118d",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048653 - anther development, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000358 - female sterility, TO:0000437 - male sterility","PO:0001004 - anther development stage ",{"$nulls":8},"DREB1B","OsDREB1B, ERF31, OsERF031, OsERF#031, OsERF31, AP2/EREBP#169, AP2/EREBP169, OsDREB1b, OsDREB1C","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B","Dehydration-responsive element-binding protein 1B, Protein DREB1B, ethylene response factor 31, APETALA2/ethylene-responsive element binding protein 169",9," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0003700 - transcription factor activity, GO:0009739 - response to gibberellin stimulus, GO:0006950 - response to stress, GO:0006970 - response to osmotic stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009845 - seed germination","TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance","PO:0007022 - seed imbibition stage ","Os09g0522000","LOC_Os09g35010.1",{"$nulls":6},"ERF3","AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2, DLN23, OsDLN23","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 3","Apetela2 transcription factor 37, ethylene response factor 3, Ethylene responsive factor 3, ethylene response factor 75, APETALA2/ethylene-responsive element binding protein 4, benzothiadiazole (BTH)-induced ethylene responsive transcriptional factor 2, benzothiadiazole-induced ethylene responsive transcriptional factor 2, BTH-induced ethylene responsive transcriptional factor 2, ethylene-responsive element binding factor 3, APETALA37, DLN repressor 23, DLN motif protein 23",1," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009735 - response to cytokinin stimulus, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0009873 - ethylene mediated signaling pathway, GO:0009414 - response to water deprivation, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009736 - cytokinin mediated signaling, GO:0009651 - response to salt stress, GO:0010366 - negative regulation of ethylene biosynthetic process, GO:0003677 - DNA binding","TO:0000371 - yield trait, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000276 - drought tolerance, TO:0000173 - ethylene sensitivity, TO:0000164 - stress trait, TO:0000167 - cytokinin sensitivity, TO:0006001 - salt tolerance","PO:0000043 - crown root , PO:0007518 - crown root emergence stage ","Os01g0797600","LOC_Os01g58420.1","Os08g0102000","Os04g0684500","Os03g0340500",2.476517,0,null,"TPR","OsTPR","TRANSLOCATED PROMOTER REGION","translocated promoter region gene",2," Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0005643 - nuclear pore, GO:0010229 - inflorescence development, GO:0017056 - structural constituent of nuclear pore, GO:0006406 - mRNA export from nucleus","TO:0000456 - spikelet number, TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching, TO:0000501 - spikelet weight","PO:0001083 - inflorescence development stage ","Os02g0741500","LOC_Os02g50799.1, LOC_Os02g50790.2"]
[{"$nulls":24},"Os11g0131900","Os11g0610900","Os11g0610900",3.794843,2.055989,null,"Os01g0303800",3.7975938,"Os08g0499300",-1.3271414,{"$nulls":29},"GRA78","OsGRA78","GREEN-REVERTIBLE ALBINO 78","green-revertible albino 78",1," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0016829 - lyase activity, GO:0015979 - photosynthesis, GO:0004124 - cysteine synthase activity, GO:0009658 - chloroplast organization, GO:0009643 - photosynthetic acclimation, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0090322 - regulation of superoxide metabolic process, GO:0031977 - thylakoid lumen, GO:0006535 - cysteine biosynthetic process from serine, GO:0009507 - chloroplast, GO:0005737 - cytoplasm, GO:0030170 - pyridoxal phosphate binding","TO:0002715 - chloroplast development trait, TO:0000326 - leaf color","PO:0000003 - whole plant ","Os01g0814800","LOC_Os01g59920.1",{"$nulls":7},"MIR2118E","miR2118e, osa-miR2118e, osa-MIR2118e","MICRORNA2118E","MICRORNA2118e, osa-miRNA2118e",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0016442 - RNA-induced silencing complex, GO:0048653 - anther development, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"GNP1","GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2, OsGA20ox2, OsGA20ox-1, GA20ox1, OsGNP1","GRAIN NUMBER PER PANICLE 1","GIBBERELLIN 20-OXIDASE 1, rice GA 20-oxidase1, GA 20-oxidase1, Gibberellin 20 oxidase 1, Gibberellin C-20 oxidase 1, GA 20-oxidase 1, GA20 oxidase-1, GA 20-oxidase 1, GA20 oxidase, Gibberellin C-20 oxidase, Grain Number per Panicle1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009686 - gibberellin biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0006970 - response to osmotic stress, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0055114 - oxidation reduction, GO:0010336 - gibberellic acid homeostasis","TO:0000397 - grain size, TO:0000291 - carbohydrate content, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000599 - enzyme activity, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000095 - osmotic response sensitivity, TO:0000357 - growth and development trait, TO:0000455 - seed set percent, TO:0000396 - grain yield","PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem ","Os03g0856700","LOC_Os03g63970.1",{"$nulls":6},"ERF91","OsERF#091, OsERF091, OsERF91, AP59, OsAP59, AP2/EREBP#147, AP2/EREBP147, OsBIERF3, BIERF3","ETHYLENE RESPONSE FACTOR 91","Apetela2 transcription factor 59, ethylene response factor 91, ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 91, APETALA2/ethylene-responsive element binding protein 147, benzothiadiazole (BTH)-induced ethylene responsive transcriptional factor 3, benzothiadiazole-induced ethylene responsive transcriptional factor 3, BTH-induced ethylene responsive transcriptional factor 3, BTH-induced ERF transcriptional factor 3",2," Tolerance and resistance - Stress tolerance,  Other","GO:0030912 - response to deep water, GO:0009620 - response to fungus, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000164 - stress trait, TO:0000276 - drought tolerance, TO:0000524 - submergence tolerance",null,"Os02g0654700","LOC_Os02g43790.1","Os05g0389600","Os07g0658300","Os06g0159600",2.476285,0,null,"TIPS-11-9","OsTIPS-11-9","_",null,11," Biochemical character,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0009044 - xylan 1,4-beta-xylosidase activity, GO:0031222 - arabinan catabolic process, GO:0009505 - plant-type cell wall, GO:0045493 - xylan catabolic process, GO:0009733 - response to auxin stimulus, GO:0005576 - extracellular region, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005975 - carbohydrate metabolic process, GO:0046556 - alpha-N-arabinofuranosidase activity","TO:0001013 - lateral root number, TO:0000163 - auxin sensitivity, TO:0000457 - total biomass yield","PO:0020121 - lateral root , PO:0007517 - lateral root emergence stage ","Os11g0673200","LOC_Os11g44950.2, LOC_Os11g44950.1"]
[{"$nulls":24},"Os01g0243700","Os01g0618900","Os01g0618900",3.0894601,2.7548828,null,"Os11g0610900",3.794843,"Os06g0523300",-1.3271295,{"$nulls":29},"RA1","OsRA1","RICE ALBINO 1","rice albino 1",6," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others","GO:0009507 - chloroplast, GO:0005739 - mitochondrion, GO:0009570 - chloroplast stroma, GO:0006426 - glycyl-tRNA aminoacylation, GO:0004820 - glycine-tRNA ligase activity, GO:0005524 - ATP binding, GO:0009658 - chloroplast organization, GO:0042254 - ribosome biogenesis, GO:0042794 - rRNA transcription from plastid promoter, GO:0010380 - regulation of chlorophyll biosynthetic process","TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000495 - chlorophyll content, TO:0000326 - leaf color","PO:0009047 - stem , PO:0025034 - leaf ","Os06g0103600","LOC_Os06g01400.1",{"$nulls":7},"MIR2118F","miR2118f, osa-miR2118f, osa-MIR2118f","MICRORNA2118F","MICRORNA2118f, osa-miRNA2118f",4," Reproductive organ - Inflorescence,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048653 - anther development, GO:0035195 - gene silencing by miRNA, GO:0010229 - inflorescence development, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0048232 - male gamete generation, GO:0009908 - flower development, GO:0016442 - RNA-induced silencing complex","TO:0000437 - male sterility, TO:0000622 - flower development trait, TO:0000621 - inflorescence development trait, TO:0000358 - female sterility","PO:0001004 - anther development stage , PO:0006327 - spikelet meristem , PO:0025277 - pollen sac , PO:0005679 - epidermis , PO:0007615 - flower development stage , PO:0009029 - stamen , PO:0005051 - hypodermis , PO:0001083 - inflorescence development stage ",{"$nulls":8},"XB15","XB15, OsPP2C35, PP2C35, OsPP59, SIP35","XA21 BINDING PROTEIN 15","XA21 binding protein 15, protein phosphatase 2C35, protein phosphatase 2C 35, protein phosphatase 59, SKIP interacting protein 35, SKIPa-interacting protein 35, SKIPa-interacting protein 35",3," Seed,  Tolerance and resistance - Disease resistance","GO:0005886 - plasma membrane, GO:0006952 - defense response, GO:0048366 - leaf development, GO:0046872 - metal ion binding, GO:0042742 - defense response to bacterium, GO:0008152 - metabolic process, GO:0007165 - signal transduction, GO:0004721 - phosphoprotein phosphatase activity","TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance",null,"Os03g0821300","LOC_Os03g60650.1",{"$nulls":6},"SNK1","SK1","SNORKEL 1","SNORKEL1",12," Tolerance and resistance - Stress tolerance,  Character as QTL","GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0030912 - response to deep water, GO:0003700 - transcription factor activity",{"$nulls":4},"Os02g0653900","Os02g0548700","Os09g0455300",2.4607484,0,null,"REM20","OsREM20","REPRODUCTIVE MERISTEM 20",null,7," Character as QTL - Yield and productivity,  Other","GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000447 - filled grain number, TO:0000396 - grain yield",null,"Os07g0232100","LOC_Os07g12820.1"]
[{"$nulls":24},"Os01g0753500","Os01g0750300","Os01g0750300",6.3130035,5.462513,null,"Os01g0945600",3.7929707,"Os09g0355400",-1.3259019,{"$nulls":29},"PGSIP-A1","OsPGSIP-A1, OsGUX1, GUX1, OsGUX1L","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN A1","plant glycogenin-like starch initiation protein A1, xylan glucuronosyltransferase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045492 - xylan biosynthetic process, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0045491 - xylan metabolic process, GO:0052386 - cell wall thickening, GO:0005794 - Golgi apparatus, GO:0048366 - leaf development, GO:0016021 - integral to membrane","TO:0000300 - glucose content, TO:0000696 - starch content, TO:0006006 - monosaccharide content, TO:0000495 - chlorophyll content, TO:0000011 - nitrogen sensitivity, TO:0000655 - leaf development trait, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000051 - stem strength","PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os01g0880200","LOC_Os01g65780.4, LOC_Os01g65780.2, LOC_Os01g65780.1, LOC_Os01g65780.3",{"$nulls":7},"MIR2118G","miR2118g, osa-miR2118g, osa-MIR2118g","MICRORNA2118G","MICRORNA2118g, osa-miRNA2118g",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0048653 - anther development, GO:0006379 - mRNA cleavage","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"SDG725","OsSDG725, OsSET8, ASHH2","SET DOMAIN GROUP PROTEIN 725","SET Domain Group Protein725, SET DOMAIN GROUP725, SET protein 8, \\ABSENT, SMALL, OR HOMEOTIC DISCS 1 HOMOLOG 2\\\"\"",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018024 - histone-lysine N-methyltransferase activity, GO:0005634 - nucleus, GO:0034968 - histone lysine methylation, GO:2000028 - regulation of photoperiodism, flowering, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0009742 - brassinosteroid mediated signaling, GO:0009908 - flower development, GO:0008270 - zinc ion binding","TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0002616 - flowering time, TO:0000391 - seed size, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0000456 - spikelet number","PO:0007615 - flower development stage ","Os02g0554000","LOC_Os02g34850.1",{"$nulls":6},"SNK2","SK2","SNORKEL 2","SNORKEL2",12," Tolerance and resistance - Stress tolerance,  Character as QTL","GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0005634 - nucleus",{"$nulls":4},"Os07g0663700","Os03g0858800","Os02g0618400",2.4558494,0,null,"GW5L","OsGW5L","GRAIN WIDTH 5-LIKE","Grain Width 5-Like, GW5-Like",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000734 - grain length",null,"Os01g0190500","LOC_Os01g09470.1"]
[{"$nulls":24},"Os08g0242700","Os01g0944900","Os01g0944900",-4.1486545,-2.6030276,null,"Os11g0233800",3.7926943,"Os08g0158800",-1.3256387,{"$nulls":29},"NAL8","OsNAL8","NARROW LEAF 8","narrow leaf 8",7," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009658 - chloroplast organization, GO:0043457 - regulation of cellular respiration, GO:0010109 - regulation of photosynthesis, GO:0010229 - inflorescence development, GO:0007005 - mitochondrion organization, GO:0051302 - regulation of cell division, GO:0048366 - leaf development, GO:0005743 - mitochondrial inner membrane, GO:0033484 - nitric oxide homeostasis, GO:0009755 - hormone-mediated signaling","TO:0000456 - spikelet number, TO:0000621 - inflorescence development trait, TO:0002660 - cytokinin content, TO:0000370 - leaf width","PO:0001083 - inflorescence development stage ","Os07g0262200","LOC_Os07g15880.1",{"$nulls":7},"MIR2118H","miR2118h, osa-miR2118h, osa-MIR2118h","MICRORNA2118H","MICRORNA2118h, osa-miRNA2118h",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0048653 - anther development","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"PDCD5","OsPDCD5","PROGRAMMED CELL DEATH 5","programmed cell death 5",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0012501 - programmed cell death, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0010600 - regulation of auxin biosynthetic process, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0003677 - DNA binding, GO:0009691 - cytokinin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0009740 - gibberellic acid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0009926 - auxin polar transport","TO:0002672 - auxin content, TO:0002660 - cytokinin content, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0002675 - gibberellic acid content, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000145 - internode length","PO:0009066 - anther , PO:0009039 - glume , PO:0009047 - stem , PO:0020142 - stem internode , PO:0025034 - leaf , PO:0005020 - vascular bundle , PO:0009005 - root ","Os05g0547850","LOC_Os05g47446.1, LOC_Os05g47446.2",{"$nulls":6},"LCS","OsHAK1, HAK1","LOW CS ACCUMULATION","High-affinity Potassium(K+) Transporter 1, Potassium transporter 1, low Cs accumulation",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0051365 - cellular response to potassium ion starvation, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0006813 - potassium ion transport, GO:0009674 - potassium:sodium symporter activity, GO:0030955 - potassium ion binding","TO:0000207 - plant height, TO:0006001 - salt tolerance",null,"Os04g0401700","LOC_Os04g32920.1, LOC_Os04g32920.2, LOC_Os04g32920.3, LOC_Os04g32920.4, LOC_Os04g32920.5","Os07g0663600","Os05g0494100","Os02g0676500",2.4530606,0,null,"APX9","OsAPX9","ASCORBATE PEROXIDASE 9","L-ascorbate peroxidase 9",9," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0034599 - cellular response to oxidative stress, GO:0009507 - chloroplast, GO:0020037 - heme binding, GO:0000302 - response to reactive oxygen species, GO:0042744 - hydrogen peroxide catabolic process, GO:0004601 - peroxidase activity","TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000357 - growth and development trait",null,"Os09g0538600","LOC_Os09g36750.2, LOC_Os09g36750.1"]
[{"$nulls":24},"Os02g0588300","Os02g0177900","Os02g0177900",2.0716345,1.1570023,null,"Os01g0760000",3.7916892,"Os02g0483500",-1.3254503,{"$nulls":29},"SLC2","OsSLC2, OsACO, ACO","SLENDER AND CRINKLY LEAF 2",null,9," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Character as QTL - Germination","GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0051213 - dioxygenase activity, GO:0009697 - salicylic acid biosynthetic process, GO:0048364 - root development, GO:0048366 - leaf development, GO:0048316 - seed development, GO:0009845 - seed germination","TO:0000370 - leaf width, TO:0000241 - leaf number, TO:0000227 - root length, TO:0000207 - plant height, TO:0000655 - leaf development trait","PO:0025527 - shoot system development stage , PO:0007045 - coleoptile emergence stage , PO:0001170 - seed development stage , PO:0001031 - 4 root elongation stage , PO:0007057 - 0 seed germination stage ","Os09g0570800 ","LOC_Os09g39720.1",{"$nulls":7},"MIR2118I","miR2118i, osa-miR2118i, osa-MIR2118i","MICRORNA2118I","MICRORNA2118i, osa-miRNA2118i",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048653 - anther development, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"SPL18","OsSPL18","RICE SQUAMOSA PROMOTER-BINDING-LIKE 18","Squamosa promoter-binding-like protein 18",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0046872 - metal ion binding, GO:0048316 - seed development","TO:0002759 - grain number, TO:0000653 - seed development trait, TO:0000399 - grain thickness, TO:0000040 - panicle length, TO:0000149 - seed width, TO:0000590 - grain weight, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os09g0507100","LOC_Os09g32944.1",{"$nulls":6},"HAK5","OsHAK5, FCO13, OsFCO13","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 5","High-affinity Potassium(K+) Transporter 5, Potassium transporter 5, high affinity K transporter 5, Functioning in Cesium Over-transport 13",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006813 - potassium ion transport, GO:0015079 - potassium ion transmembrane transporter activity, GO:0048364 - root development, GO:0030001 - metal ion transport, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0030955 - potassium ion binding","TO:0000656 - root development trait, TO:0006001 - salt tolerance","PO:0007520 - root development stage , PO:0009005 - root , PO:0025034 - leaf ","Os01g0930400","LOC_Os01g70490.1","Os02g0593500","Os05g0244700","Os09g0431300",2.442088,0,null,"ANK1 ","OsANK1","ANKYRIN 1","Ankyrin 1, Ankyrin domain containing protein 1",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000052 - primary branching of inflorescence, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000547 - primary branch number","PO:0006327 - spikelet meristem , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0025073 - branch ","Os02g0492000","LOC_Os02g29040.2, LOC_Os02g29040.1"]
[{"$nulls":24},"Os09g0438100","Os02g0781000","Os02g0781000",2.7800424,1.5210515,null,"Os07g0123500",3.7906387,"Os09g0565700",-1.3244491,{"$nulls":29},"TCM12","OsTCM12, iPGAM, OsiPGAM","THERMO-SENSITIVE CHLOROSIS MUTANT 12","thermo-sensitive chlorosis mutant 12, \\2, 3-bisphosphoglycerate-independent phosphoglycerate mutase\\\"\"",12," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0009409 - response to cold, GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0015979 - photosynthesis, GO:0015995 - chlorophyll biosynthetic process","TO:0000293 - chlorophyll-a content, TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000303 - cold tolerance, TO:0000295 - chlorophyll-b content",null,"Os12g0536000","LOC_Os12g35040.1",{"$nulls":7},"MIR2118J","miR2118j, osa-miR2118j, osa-MIR2118j","MICRORNA2118J","MICRORNA2118j, osa-miRNA2118j",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0016442 - RNA-induced silencing complex, GO:0048653 - anther development, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"GPA6","OsNHX5, NHX5, OsGPA6","GLUTELIN PRECURSOR ACCUMULATION 6","Na+/H+ antiporter 5, NHX-type antiporter 5, glutelin precursor accumulation6",9," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0006885 - regulation of pH, GO:0015385 - sodium:hydrogen antiporter activity, GO:0015031 - protein transport, GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0006892 - post-Golgi vesicle-mediated transport, GO:0005802 - trans-Golgi network, GO:0005794 - Golgi apparatus","TO:0000592 - 1000-dehulled grain weight, TO:0000196 - amylose content, TO:0000104 - floury endosperm, TO:0000598 - protein content, TO:0006001 - salt tolerance, TO:0002656 - starch grain shape, TO:0000604 - fat and essential oil content","PO:0009006 - shoot system , PO:0009005 - root , PO:0020104 - leaf sheath ","Os09g0286400","LOC_Os09g11450.1, LOC_Os09g11450.2",{"$nulls":6},"HAK7","OsHAK7","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 7","High-affinity Potassium(K+) Transporter 7, Potassium transporter 7",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006813 - potassium ion transport, GO:0015079 - potassium ion transmembrane transporter activity, GO:0030955 - potassium ion binding, GO:0051365 - cellular response to potassium ion starvation, GO:0016021 - integral to membrane",null,null,"Os07g0669700","LOC_Os07g47350.1, LOC_Os07g47350.2","Os06g0661800","Os06g0125800","Os08g0540400",2.4400322,0,null,"ANK2","OsANK2, OsTPR047, TPR047, OsTPR47, TPR47","ANKYRIN 2","Ankyrin 2, Ankyrin domain containing protein 2, Tetratricopeptide repeat domain containing protein 47",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000621 - inflorescence development trait, TO:0000557 - secondary branch number, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0006327 - spikelet meristem , PO:0001083 - inflorescence development stage , PO:0025073 - branch ","Os02g0494400","LOC_Os02g29210.4, LOC_Os02g29210.3, LOC_Os02g29210.2, LOC_Os02g29210.1"]
[{"$nulls":24},"Os06g0561000","Os03g0124900","Os03g0124900",2.4120312,1.557772,null,"Os06g0693100",3.7877204,"Os04g0371200",-1.3237983,{"$nulls":29},"WSL8","OsWSL8, OsdNK1, dNK1","WHITE STRIPE LEAF 8","white stripe leaf 8, deoxyribonucleoside kinase 1",5," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0019136 - deoxynucleoside kinase activity, GO:0005737 - cytoplasm, GO:0009658 - chloroplast organization, GO:0043173 - nucleotide salvage","TO:0002715 - chloroplast development trait, TO:0000069 - variegated leaf, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content",null,"Os05g0430200","LOC_Os05g35520.3, LOC_Os05g35520.2, LOC_Os05g35520.1",{"$nulls":7},"MIR2118K","miR2118k, osa-miR2118k, osa-MIR2118k","MICRORNA2118K","MICRORNA2118k, osa-miRNA2118k",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0048653 - anther development, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"AGP30","OsAGP30, DLN50, OsDLN50","ARABINOGALACTAN PROTEIN 30","Arabinogalactan protein 30, DLN repressor 50, DLN motif protein 50",2," Reproductive organ - Inflorescence,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005622 - intracellular, GO:0008585 - female gonad development, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0003676 - nucleic acid binding, GO:0008270 - zinc ion binding","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009073 - stigma ","Os02g0196100","LOC_Os02g10240.1",{"$nulls":6},"HAK10","OsHAK10","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 10","High-affinity Potassium(K+) Transporter 10, Potassium transporter 10",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0030955 - potassium ion binding, GO:0006813 - potassium ion transport, GO:0015079 - potassium ion transmembrane transporter activity, GO:0005773 - vacuole",null,null,"Os06g0625900","LOC_Os06g42030.1","Os02g0204400","Os04g0585200","Os01g0117600",2.4372416,0,null,"TPR45","OsTPR045, TPR045, OsTPR45","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 45","Tetratricopeptide repeat domain containing protein 45",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0010229 - inflorescence development, GO:0048281 - inflorescence morphogenesis","TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence, TO:0000621 - inflorescence development trait","PO:0025073 - branch , PO:0001083 - inflorescence development stage , PO:0006327 - spikelet meristem , PO:0009049 - inflorescence ","Os02g0493300","LOC_Os02g29160.1"]
[{"$nulls":24},"Os03g0271500","Os03g0161600","Os03g0161600",2.3736722,2.6363022,null,"Os01g0580200",3.7852356,"Os08g0126300",-1.3236626,{"$nulls":29},"DSL1","OsDSL1, OsHDA711, HDA711","DWARF WITH SLENDER LEAF1","dwarf with slender leaf 1, Histone Deacetylase 711",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle","GO:0051781 - positive regulation of cell division, GO:0000118 - histone deacetylase complex, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0070933 - histone H4 deacetylation, GO:0070932 - histone H3 deacetylation, GO:0046872 - metal ion binding, GO:0004407 - histone deacetylase activity, GO:0048608 - reproductive structure development, GO:0010229 - inflorescence development","TO:0000145 - internode length, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000370 - leaf width, TO:0000472 - vascular bundle number, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os04g0409600","LOC_Os04g33480.1",{"$nulls":7},"MIR2118L","miR2118l, osa-miR2118l, osa-MIR2118l","MICRORNA2118L","MICRORNA2118l, osa-miRNA2118l",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0048653 - anther development","TO:0000358 - female sterility, TO:0000437 - male sterility","PO:0001004 - anther development stage ",{"$nulls":8},"PAP3C","OsPAP3c","PURPLE ACID PHOSPHATASE 3C","purple acid phosphatase 3c",3," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0030643 - cellular phosphate ion homeostasis, GO:0016036 - cellular response to phosphate starvation, GO:0005773 - vacuole, GO:0006817 - phosphate transport, GO:0016311 - dephosphorylation, GO:0003993 - acid phosphatase activity","TO:0002661 - seed maturation, TO:0000102 - phosphorus sensitivity",null,"Os03g0238600","LOC_Os03g13540.1",{"$nulls":6},"HAK11","OsHAK11","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 11","High-affinity Potassium(K+) Transporter 11, Probable potassium transporter 11",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015079 - potassium ion transmembrane transporter activity, GO:0006813 - potassium ion transport, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0030955 - potassium ion binding, GO:0055085 - transmembrane transport","TO:0006001 - salt tolerance",null,"Os04g0613900","LOC_Os04g52390.1","Os01g0292700","Os03g0165900","Os09g0547500",2.4309192,0,null,"TPR46","OsTPR046, TPR046, OsTPR46","TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 46","Tetratricopeptide repeat domain containing protein 46",2," Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010077 - maintenance of inflorescence meristem identity, GO:0048281 - inflorescence morphogenesis, GO:0010229 - inflorescence development","TO:0000142 - secondary branching of inflorescence, TO:0000371 - yield trait, TO:0000557 - secondary branch number, TO:0000621 - inflorescence development trait, TO:0000050 - inflorescence branching","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os02g0494000","LOC_Os02g29190.1"]
[{"$nulls":24},"Os05g0319700","Os03g0603600","Os03g0603600",3.225383,2.3857577,null,"Os04g0691600",3.7849748,"Os05g0490800",-1.3196164,{"$nulls":29},"CAF1","OsCAF1","CRS2-ASSOCIATED FACTOR 1","CRS2-associated factor 1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0000373 - Group II intron splicing, GO:0006397 - mRNA processing, GO:0009570 - chloroplast stroma, GO:0009507 - chloroplast, GO:0003723 - RNA binding, GO:0009651 - response to salt stress, GO:0009658 - chloroplast organization, GO:0009409 - response to cold","TO:0002715 - chloroplast development trait, TO:0000605 - hydrogen peroxide content, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000293 - chlorophyll-a content, TO:0006001 - salt tolerance, TO:0000326 - leaf color, TO:0000303 - cold tolerance","PO:0009047 - stem , PO:0025034 - leaf , PO:0009051 - spikelet ","Os01g0495900","LOC_Os01g31110.1",{"$nulls":7},"MIR2118M","miR2118m, osa-miR2118m, osa-MIR2118m","MICRORNA2118M","MICRORNA2118m, osa-miRNA2118m",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035195 - gene silencing by miRNA, GO:0048653 - anther development, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage","TO:0000358 - female sterility, TO:0000437 - male sterility","PO:0001004 - anther development stage ",{"$nulls":8},"PAP9B","OsPAP9b","PURPLE ACID PHOSPHATASE 9B","purple acid phosphatase 9b",1," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0003993 - acid phosphatase activity, GO:0006817 - phosphate transport, GO:0046872 - metal ion binding","TO:0002661 - seed maturation, TO:0000102 - phosphorus sensitivity",null,"Os01g0800500","LOC_Os01g58640.1",{"$nulls":6},"HAK12","OsHAK12","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 12","High-affinity Potassium(K+) Transporter 12, Putative potassium transporter 12",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015079 - potassium ion transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0006813 - potassium ion transport, GO:0030955 - potassium ion binding, GO:0051365 - cellular response to potassium ion starvation",null,null,"Os08g0206400","LOC_Os08g10550.1","Os08g0173300","Os03g0268400","Os07g0437500",2.4222035,0,null,"ENL2","OsCTPS1, CTPS1","ENDOSPERMLESS 2","cytidine triphosphate synthase 1, endospermless 2",1," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0048364 - root development, GO:0048487 - beta-tubulin binding, GO:0043014 - alpha-tubulin binding, GO:0009960 - endosperm development, GO:0019856 - pyrimidine base biosynthetic process, GO:0006541 - glutamine metabolic process, GO:0006241 - CTP biosynthetic process, GO:0042802 - identical protein binding, GO:0003883 - CTP synthase activity, GO:0005524 - ATP binding, GO:0010342 - cellularization of endosperm, GO:0051785 - positive regulation of nuclear division, GO:0000226 - microtubule cytoskeleton organization, GO:0008017 - microtubule binding, GO:0015631 - tubulin binding","TO:0000181 - seed weight, TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000656 - root development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000397 - grain size, TO:0002692 - root meristem development","PO:0020020 - nucellus , PO:0007631 - plant embryo stage , PO:0001170 - seed development stage , PO:0009084 - pericarp , PO:0020148 - shoot apical meristem , PO:0009049 - inflorescence , PO:0025074 - embryo sac , PO:0009009 - plant embryo , PO:0007520 - root development stage , PO:0007633 - endosperm development stage , PO:0009089 - endosperm ","Os01g0616900","LOC_Os01g43020.1"]
[{"$nulls":24},"Os03g0679700","Os03g0792500","Os03g0792500",-1.4623181,-1.0055532,null,"Os07g0424400",3.7829869,"Os12g0101800",-1.3193709,{"$nulls":29},"REY(K2)","OsPFKB1, PFKB1","REVERTIBLE EARLY YELLOWING KITAAKE 2","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0008443 - phosphofructokinase activity, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0019200 - carbohydrate kinase activity","TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os10g0573000","LOC_Os10g42240.2, LOC_Os10g42240.1",{"$nulls":7},"MIR2118N","miR2118n, osa-miR2118n, osa-MIR2118n","MICRORNA2118N","MICRORNA2118n, osa-miRNA2118n",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048653 - anther development, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"PAP10A","OsPAP10a, PAP10","PURPLE ACID PHOSPHATASE 10A","purple acid phosphatase 10a",1," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0003993 - acid phosphatase activity, GO:0009505 - plant-type cell wall, GO:0006817 - phosphate transport, GO:0016036 - cellular response to phosphate starvation","TO:0002661 - seed maturation, TO:0000102 - phosphorus sensitivity",null,"Os01g0776600","LOC_Os01g56880.2, LOC_Os01g56880.1",{"$nulls":6},"HAK16","OsHAK16","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 16","High-affinity Potassium(K+) Transporter 16, Probable potassium transporter 16",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0030955 - potassium ion binding, GO:0055078 - sodium ion homeostasis, GO:0042594 - response to starvation, GO:0009651 - response to salt stress, GO:0006813 - potassium ion transport, GO:0005886 - plasma membrane, GO:0055075 - potassium ion homeostasis, GO:0051365 - cellular response to potassium ion starvation","TO:0000514 - potassium uptake, TO:0000609 - potassium content, TO:0000008 - potassium sensitivity, TO:0006001 - salt tolerance","PO:0005020 - vascular bundle , PO:0004006 - mesophyll cell , PO:0009047 - stem , PO:0025034 - leaf ","Os03g0575200","LOC_Os03g37840.1","Os09g0474051","Os09g0438000","Os05g0365300",2.4046326,0,null,"RGN1","OsRGN1","REGULATOR OF GRAIN NUMBER 1","REGULATOR OF GRAIN NUMBER1",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009690 - cytokinin metabolic process","TO:0000449 - grain yield per plant, TO:0002660 - cytokinin content, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000557 - secondary branch number, TO:0000040 - panicle length, TO:0000621 - inflorescence development trait, TO:0002759 - grain number","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os01g0685400","LOC_Os01g49160.1"]
[{"$nulls":24},"Os07g0642200","Os04g0382300","Os04g0382300",2.9198606,1.4266669,null,"Os11g0290600",3.7821014,"Os01g0910500",-1.3191805,{"$nulls":29},"NADK1","OsNADK1","NAD KINASE 1","NAD kinase 1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0045454 - cell redox homeostasis, GO:0006741 - NADP biosynthetic process, GO:0009409 - response to cold, GO:0005829 - cytosol, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0006970 - response to osmotic stress, GO:0005524 - ATP binding, GO:0003951 - NAD+ kinase activity, GO:0006979 - response to oxidative stress, GO:0019674 - NAD metabolic process, GO:0009651 - response to salt stress","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000495 - chlorophyll content, TO:0002637 - leaf size, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0006002 - proline content, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress","PO:0000003 - whole plant ","Os01g0957000","LOC_Os01g72690.2, LOC_Os01g72690.1",{"$nulls":7},"MIR2118O","miR2118o, osa-miR2118o, osa-MIR2118o","MICRORNA2118O","MICRORNA2118o, osa-miRNA2118o",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0048653 - anther development","TO:0000437 - male sterility, TO:0000358 - female sterility","PO:0001004 - anther development stage ",{"$nulls":8},"PAO5","OsPAO5, OsAO2, AO2","POLYAMINE OXIDASE 5","Polyamine oxidase 5, Amine oxidase 2",4," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0050665 - hydrogen peroxide biosynthetic process, GO:0046592 - polyamine oxidase activity, GO:0000166 - nucleotide binding, GO:0009845 - seed germination, GO:0006598 - polyamine catabolic process, GO:0005777 - peroxisome, GO:0009651 - response to salt stress, GO:0009415 - response to water","TO:0000605 - hydrogen peroxide content, TO:0010001 - percent germination, TO:0006001 - salt tolerance","PO:0009009 - plant embryo , PO:0007057 - 0 seed germination stage ","Os04g0671300","LOC_Os04g57560.1",{"$nulls":6},"HAK21","OsHAK21","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 21","High-affinity Potassium(K+) Transporter 21, Potassium transporter 21",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030007 - cellular potassium ion homeostasis, GO:0010107 - potassium ion import, GO:0009651 - response to salt stress, GO:0006883 - cellular sodium ion homeostasis, GO:0042542 - response to hydrogen peroxide, GO:0005886 - plasma membrane, GO:0030955 - potassium ion binding, GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0009753 - response to jasmonic acid stimulus, GO:0006813 - potassium ion transport","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000514 - potassium uptake, TO:0000609 - potassium content, TO:0000525 - sodium to potassium content ratio","PO:0005421 - parenchyma , PO:0005352 - xylem ","Os03g0576200","LOC_Os03g37930.1","Os03g0841800","Os02g0141100","Os05g0387700",2.4045897,0,null,"SCR8","OsSCR8","SHORT CROWN ROOT 8","Short Crown Root 8",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009266 - response to temperature stimulus, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0048367 - shoot development, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0010449 - root meristem growth, GO:0006952 - defense response, GO:0005524 - ATP binding, GO:0043531 - ADP binding, GO:0048364 - root development, GO:0048830 - adventitious root development","TO:0002685 - crown root number, TO:0000656 - root development trait, TO:0002692 - root meristem development, TO:0000303 - cold tolerance, TO:0000470 - vascular tissue related trait, TO:0000296 - vegetative vigor, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0000432 - temperature response trait, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0000456 - spikelet number, TO:0000457 - total biomass yield, TO:0000654 - shoot development trait, TO:0000476 - growth hormone content","PO:0007520 - root development stage ","Os08g0246300","LOC_Os08g14850.1"]
[{"$nulls":24},"Os06g0725200","Os04g0631200","Os04g0631200",1.9133366,1.5406297,null,"Os08g0189200",3.7809398,"Os09g0504800",-1.3179542,{"$nulls":29},"SRLK","OsSRLK","SENESCENCE-INDUCED RECEPTOR-LIKE KINASE","Senescence-Induced Receptor-Like Kinase",1," Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0015996 - chlorophyll catabolic process, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000152 - panicle number, TO:0000456 - spikelet number, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root ","Os01g0223600","LOC_Os01g12390.1",{"$nulls":7},"_","YY1, OsLTPc2, OsLtpIII.2, LTP45","_","type C non-specific lipid transfer protein 2, non-specific lipid transfer protein c2, lipid transfer protein c2, LIPID TRANSFER PROTEIN45",9," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005576 - extracellular region, GO:0005548 - phospholipid transporter activity, GO:0048653 - anther development, GO:0006649 - phospholipid transfer to membrane",null,null,"Os09g0525500","LOC_Os09g35700.1",{"$nulls":6},"_","PEPC-1, Osppc1, ppc1","_","PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1",2," Biochemical character,  Seed,  Seed - Physiological traits - Storage substances","GO:0015977 - carbon utilization by fixation of carbon dioxide, GO:0008964 - phosphoenolpyruvate carboxylase activity, GO:0008652 - cellular amino acid biosynthetic process, GO:0048316 - seed development, GO:0006099 - tricarboxylic acid cycle, GO:0006807 - nitrogen compound metabolic process","TO:0002653 - endosperm storage protein content, TO:0000653 - seed development trait","PO:0004506 - developing seed stage ","Os02g0244700","LOC_Os02g14770.1, LOC_Os02g14770.2, LOC_Os02g14770.3, LOC_Os02g14770.4",{"$nulls":6},"NYC3","nyc3, OsNYC3, PPH","NON-YELLOW COLORING 3","pheophytinase",6," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0009536 - plastid, GO:0009645 - response to low light intensity stimulus, GO:0010941 - regulation of cell death, GO:0050832 - defense response to fungus, GO:0080124 - pheophytinase activity, GO:0016787 - hydrolase activity, GO:0015996 - chlorophyll catabolic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000326 - leaf color, TO:0000605 - hydrogen peroxide content, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os06g0354700","LOC_Os06g24730.3, LOC_Os06g24730.2, LOC_Os06g24730.1","Os02g0644100","Os02g0817600","Os04g0526600",2.402092,0,null,"ROD1","OsROD1","RESISTANCE OF RICE TO DISEASES 1","RESISTANCE OF RICE TO DISEASES1",6," Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0022414 - reproductive process, GO:0019722 - calcium-mediated signaling, GO:0050776 - regulation of immune response, GO:0010450 - inflorescence meristem growth, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005886 - plasma membrane, GO:0005509 - calcium ion binding, GO:0035091 - phosphoinositide binding, GO:0008289 - lipid binding","TO:0000074 - blast disease, TO:0000357 - growth and development trait, TO:0000605 - hydrogen peroxide content, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000476 - growth hormone content, TO:0000396 - grain yield","PO:0025034 - leaf , PO:0000230 - inflorescence meristem , PO:0009049 - inflorescence ","Os06g0128800","LOC_Os06g03810.1"]
[{"$nulls":24},"Os01g0600900","Os05g0128900","Os05g0128900",2.0519114,2.016027,null,"Os03g0725200",3.7773674,"Os09g0568700",-1.3166856,{"$nulls":29},"PLGG1","OsPLGG1","PLASTIDIC GLYCOLATE/GLYCERATE TRANSLOCATOR 1","plastidic glycolate/glycerate translocator 1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0009853 - photorespiration, GO:0043879 - glycolate transmembrane transporter activity, GO:0009507 - chloroplast","TO:0000326 - leaf color, TO:0000592 - 1000-dehulled grain weight, TO:0001015 - photosynthetic rate, TO:0000590 - grain weight, TO:0000346 - tiller number",null,"Os01g0511600","LOC_Os01g32830.2, LOC_Os01g32830.1",{"$nulls":7},"PME32","OsPME32, OsSTA270","PECTIN METHYLESTERASE 32","pectin methylesterase 32",11," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045330 - aspartyl esterase activity, GO:0005618 - cell wall, GO:0030599 - pectinesterase activity, GO:0042545 - cell wall modification",null,"PO:0009066 - anther ","Os11g0659600","LOC_Os11g43830.1",{"$nulls":6},"NAC26","ONAC026, ONAC26, OsEnS-8, DLN11, OsDLN11","NAC DOMAIN-CONTAINING PROTEIN 26","NAC domain-containing protein 026, NAC domain-containing protein 26, endosperm-specific gene 8, DLN repressor 11, DLN motif protein 11",1," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0003677 - DNA binding, GO:0019252 - starch biosynthetic process, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000696 - starch content, TO:0002653 - endosperm storage protein content, TO:0000598 - protein content, TO:0000484 - seed shape","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0009009 - plant embryo ","Os01g0393100","LOC_Os01g29840.1",{"$nulls":6},"PLDbeta1","OsPLDbeta1","PHOSPHOLIPASE D beta 1","phospholipase Dbeta1",10," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0046686 - response to cadmium ion, GO:0003824 - catalytic activity, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0004630 - phospholipase D activity, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os10g0524400","LOC_Os10g38060.1, LOC_Os10g38060.2","Os04g0538000","Os06g0142900","Os03g0826800",2.4005404,0,null,"SDR7-6","OsSDR7-6","SHORT-CHAIN ALCOHOL DEHYDROGENASE/REDUCTASE 7-6","short-chain alcohol dehydrogenase/reductase 7-6",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0060548 - negative regulation of cell death, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0070265 - necrotic cell death, GO:0009416 - response to light stimulus, GO:0016491 - oxidoreductase activity, GO:0005783 - endoplasmic reticulum, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance, TO:0000075 - light sensitivity, TO:0000399 - grain thickness, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000605 - hydrogen peroxide content, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease",null,"Os07g0663900 ","LOC_Os07g46860.1"]
[{"$nulls":24},"Os05g0382600","Os05g0491200","Os05g0491200",1.8963717,1.044405,null,"Os03g0787400",3.7745905,"Os03g0859300",-1.316145,{"$nulls":29},"SIR109944 ","siR109944","SMALL INTERFERING RNA SIR109944","small interfering RNA siR109944",null," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0050832 - defense response to fungus, GO:0016246 - RNA interference, GO:0009850 - auxin metabolic process","TO:0000124 - flag leaf angle, TO:0000255 - sheath blight disease resistance, TO:0000227 - root length",{"$nulls":10},"LAX2","OsLAX2, Gnp4/LAX2, Gnp4","LAX PANICLE 2","lax panicle2, Grain number per-panicle 4",4," Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0030307 - positive regulation of cell growth","TO:0000163 - auxin sensitivity, TO:0000152 - panicle number, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000382 - 1000-seed weight",null,"Os04g0396500","LOC_Os04g32510.1",{"$nulls":6},"_","OsSERK1, OsBAK1, OsSERK1/OsBAK1, OsBISERK1, OsSerk1, OsBAK1-1, 08SG2/OsBAK1, 08SG2, SG2","_","somatic embryogenesis receptor-like kinase 1, somatic embryogenesis receptor kinase 1, BRI1-associated receptor kinase 1, BTH-induced SERK1, benzothiadiazole-induced SERK1, bri1-associated receptor kinase 1 (BAK1) homologue 1, small grain 2",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0016021 - integral to membrane, GO:0009742 - brassinosteroid mediated signaling, GO:0032502 - developmental process, GO:0042127 - regulation of cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0004674 - protein serine/threonine kinase activity","TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0002759 - grain number",null,"Os08g0174700","LOC_Os08g07760.1",{"$nulls":6},"PLDzeta1","OsPLDzeta1, OsPLDrho1","PHOSPHOLIPASE D zeta 1","phospholipase D rho 1",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0004630 - phospholipase D activity","TO:0000102 - phosphorus sensitivity",null,"Os05g0358700","LOC_Os05g29050.1, LOC_Os05g29050.2","Os03g0333400","Os02g0790500","Os03g0811100",2.3960612,0,null,"BIRG1","OsBIRG1","BIG RICE GRAIN 1",null,3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0055064 - chloride ion homeostasis, GO:0010431 - seed maturation, GO:0005886 - plasma membrane, GO:0042910 - xenobiotic transporter activity, GO:0016020 - membrane, GO:0022857 - transmembrane transporter activity, GO:0015297 - antiporter activity, GO:0001558 - regulation of cell growth, GO:0009651 - response to salt stress, GO:0015108 - chloride transmembrane transporter activity, GO:0015562 - efflux transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000734 - grain length, TO:0000057 - grain moisture, TO:0000598 - protein content, TO:0000696 - starch content, TO:0001015 - photosynthetic rate, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0000068 - lodging incidence, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000397 - grain size, TO:0006001 - salt tolerance","PO:0020104 - leaf sheath , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0020141 - stem node , PO:0009010 - seed , PO:0009005 - root , PO:0009047 - stem , PO:0007632 - seed maturation stage , PO:0009051 - spikelet , PO:0025281 - pollen , PO:0009030 - carpel , PO:0000293 - guard cell , PO:0025034 - leaf ","Os03g0858800","LOC_Os03g64150.1"]
[{"$nulls":24},"Os01g0540300","Os06g0156900","Os06g0156900",-0.9817438,-1.0903841,null,"Os10g0198300",3.7726467,"Os12g0616500",-1.3152285,{"$nulls":29},"_","OsSTA135, STA135, OsODD21, ODD21, 2-ODD21, Os2-ODD21, Os2ODD21, M2H, OsM2H","_","2-oxoglutarate-dependent dioxygenase 21, Melatonin 2-Hydroxylase",4," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007623 - circadian rhythm, GO:0051213 - dioxygenase activity, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0010030 - positive regulation of seed germination, GO:0009648 - photoperiodism, GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0030186 - melatonin metabolic process, GO:0046686 - response to cadmium ion","TO:0000495 - chlorophyll content, TO:0010001 - percent germination, TO:0000654 - shoot development trait, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000467 - cell membrane stability, TO:0000605 - hydrogen peroxide content","PO:0009066 - anther , PO:0001054 - 4 leaf senescence stage ","Os04g0667400","LOC_Os04g57180.1",{"$nulls":7},"FUCTA","OsFUT11, FUT11, FucTA, OsFucTA, OsFucT, FucT, \\alpha1, 3-FucT\\\"\"","CORE ALPHA-1,3-FUCOSYLTRANSFERASE","core alpha-1, 3-fucosyltransferase, alpha1, 3-Fucosyltransferase, Glycoprotein 3-alpha-L-fucosyltransferase A",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018392 - glycoprotein 3-alpha-L-fucosyltransferase activity, GO:0008417 - fucosyltransferase activity, GO:0006486 - protein amino acid glycosylation, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009908 - flower development, GO:0032580 - Golgi cisterna membrane, GO:0009555 - pollen development, GO:0048653 - anther development","TO:0000576 - stem length, TO:0000391 - seed size, TO:0000214 - anther shape, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000531 - anther length, TO:0000207 - plant height, TO:0002610 - pistil length, TO:0000145 - internode length, TO:0000622 - flower development trait, TO:0000429 - salt sensitivity, TO:0000448 - filled grain percentage","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0007615 - flower development stage ","Os08g0472600","LOC_Os08g36840.1",{"$nulls":6},"_","OsPE","_","polyembryo, Polyembryony, polyembryonic mutant",3," Seed - Morphological traits - Embryo",{"$nulls":3},"Os03g0241300","LOC_Os03g13810.1, LOC_Os03g13810.2, LOC_Os03g13810.3",{"$nulls":6},"PLDzeta2","OsPLDzeta2, OsPLDrho2","PHOSPHOLIPASE D zeta 2","phospholipase D rho 2",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0004630 - phospholipase D activity, GO:0005543 - phospholipid binding","TO:0002661 - seed maturation, TO:0000102 - phosphorus sensitivity",null,"Os01g0310100","LOC_Os01g20860.1","Os04g0435700","Os01g0710200","Os07g0605200",2.3901968,0,null,"FLO19","ptPDC-E1-alpha1, OsptPDC-E1-alpha1","FLOURY ENDOSPERM 19","floury endosperm19, Plastidic pyruvate dehydrogenase complex E1 component subunit Alpha1, plastid-localized pyruvate dehydrogenase complex E1 component subunit alpha1",4," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0006086 - acetyl-CoA biosynthetic process from pyruvate, GO:0006096 - glycolysis, GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity, GO:0009507 - chloroplast, GO:0043231 - intracellular membrane-bounded organelle, GO:0019375 - galactolipid biosynthetic process, GO:0009660 - amyloplast organization, GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0009536 - plastid","TO:0000397 - grain size, TO:0000449 - grain yield per plant, TO:0000396 - grain yield, TO:0000181 - seed weight, TO:0000391 - seed size, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000196 - amylose content, TO:0000696 - starch content, TO:0000399 - grain thickness, TO:0002658 - starch grain synthesis, TO:0000604 - fat and essential oil content, TO:0000487 - endosperm color, TO:0000104 - floury endosperm, TO:0000592 - 1000-dehulled grain weight","PO:0007633 - endosperm development stage , PO:0000003 - whole plant , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009049 - inflorescence ","Os04g0119400","LOC_Os04g02900.2, LOC_Os04g02900.1"]
[{"$nulls":24},"Os12g0510900","Os06g0679500","Os06g0679500",4.860439,2.9555652,null,"Os02g0781900",3.770461,"Os10g0578050",-1.3148137,{"$nulls":29},"GRY79","OsGRY79, OsMSL12, MSL12","GREEN-REVERTIBLE YELLOW 79","green-revertible yellow79, Myb/SANT-LIKE 12",2," Vegetative organ - Leaf,  Coloration","GO:0045333 - cellular respiration, GO:0009658 - chloroplast organization, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0009507 - chloroplast, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003682 - chromatin binding, GO:0015979 - photosynthesis","TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content","PO:0025034 - leaf , PO:0007112 - 1 main shoot growth stage ","Os02g0539600","LOC_Os02g33610.2, LOC_Os02g33610.1",{"$nulls":7},"GGT","OsGGT, OsPGSIP-C1, PGSIP-C1","GLYCOGENIN GLUCOSYLTRANSFERASE","glycogenin glucosyltransferase, plant glycogenin-like starch initiation protein C1",10," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016757 - transferase activity, transferring glycosyl groups","TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height",null,"Os10g0555100","LOC_Os10g40640.1",{"$nulls":6},"NGLF","OsARG, ARG, Nglf, Nglf-1, OsAGM, AGM","NARROW GRAIN AND LOW FERTILITY","narrow grain and low fertility, arginase, Osarginase",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0042742 - defense response to bacterium, GO:0006527 - arginine catabolic process, GO:0050897 - cobalt ion binding, GO:0004053 - arginase activity, GO:0006596 - polyamine biosynthetic process","TO:0006001 - salt tolerance, TO:0000050 - inflorescence branching, TO:0002730 - grain shape, TO:0002759 - grain number",null,"Os04g0106300","LOC_Os04g01590.1",{"$nulls":6},"KNAT7","HOS66, HB365, OsKNAT7","KNOTTED ARABIDOPSIS THALIANA 7","HOMEOBOX ORYZA SATIVA 66, Homeobox protein knotted-1-like 3, Homeobox protein HOS66, KNOTTED ARABIDOPSIS THALIANA7, KNOX ARABIDOPSIS THALIANA7",3," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0010229 - inflorescence development, GO:0009664 - plant-type cell wall organization, GO:0009809 - lignin biosynthetic process, GO:0080006 - internode patterning, GO:0001558 - regulation of cell growth, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009834 - secondary cell wall biogenesis","TO:0000731 - lignin content, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000621 - inflorescence development trait, TO:0000068 - lodging incidence","PO:0001083 - inflorescence development stage ","Os03g0123500","LOC_Os03g03164.3, LOC_Os03g03164.2, LOC_Os03g03164.1","Os11g0704700","Os07g0663800","Os03g0150500",2.359044,0,null,"GSN5","qGSN5, OsGSN5","GRAIN SIZE AND GRAIN NUMBER 5","grain size and grain number 5",5," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0042127 - regulation of cell proliferation","TO:0002759 - grain number, TO:0000397 - grain size",null,"Os05g0548600","LOC_Os05g47510.1"]
[{"$nulls":24},"Os05g0455700","Os07g0424400","Os07g0424400",3.7829869,3.1942482,null,"Os02g0732200",3.7667637,"Os07g0541500",-1.3138751,{"$nulls":29},"_","OsMAX1D, MAX1D, Os1900/CYP711A5, Os1900, CYP711A5, OsCYP711A5","_","MORE AXILLARY GROWTH 1D, Cytochrome P450 711A5",2," Biochemical character,  Vegetative organ - Leaf","GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000492 - leaf shape, TO:0002637 - leaf size, TO:0002639 - shoot branching",null,"Os02g0221900","LOC_Os02g12890.1, LOC_Os02g12890.2",{"$nulls":7},"_","Vatp, OsSTA154","_","V-ATPase B-subunit, p-VATPase",5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0487600","LOC_Os05g40900.1, LOC_Os05g40900.2",{"$nulls":6},"MIR408","miR408, osa-MIR408osa-miR408 osa-miR408-3p osa-miR408-5p, OsMIR408","MICRORNA408","MICRORNA408",1," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0009793 - embryonic development ending in seed dormancy, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex","TO:0000276 - drought tolerance, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0000592 - 1000-dehulled grain weight, TO:0000429 - salt sensitivity, TO:0000734 - grain length, TO:0000620 - embryo development trait, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0007631 - plant embryo stage , PO:0020032 - plumule , PO:0020031 - radicle , PO:0009009 - plant embryo ","Os01g0322700",{"$nulls":7},"GAMYBL1","OsGAMYBL1","GAMYB-LIKE 1","GAMYB-like1",6," Tolerance and resistance - Disease resistance,  Other","GO:0009908 - flower development, GO:0010476 - gibberellin-mediated signaling, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os06g0605600","LOC_Os06g40330.1","Os05g0120100","Os05g0499400","Os01g0787000",2.3563225,0,null,"MFAP1","OsMFAP1","MICROFIBRILLAR-ASSOCIATED PROTEIN 1","microfibrillar-associated protein 1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0002237 - response to molecule of bacterial origin, GO:0052542 - callose deposition during defense response, GO:0002679 - respiratory burst during defense response, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin","TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000346 - tiller number, TO:0000371 - yield trait","PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0020142 - stem internode ","Os06g0335101","LOC_Os06g22850.2"]
[{"$nulls":24},"Os01g0917400","Os07g0552800","Os07g0552800",4.2491183,2.23083,null,"Os03g0702000",3.763943,"Os10g0495900",-1.3136619,{"$nulls":29},"_","OsMAX1b, MAX1b, Os5100/CYP711A6, Os5100, CYP711A6, Os/CYP711A6","_","MORE AXILLARY GROWTH 1b, Cytochrome P450 711A6",6," Biochemical character,  Vegetative organ - Leaf","GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0005506 - iron ion binding, GO:0004497 - monooxygenase activity","TO:0000492 - leaf shape, TO:0002639 - shoot branching, TO:0002637 - leaf size",null,"Os06g0565100","LOC_Os06g36920.1",{"$nulls":7},"AN1","An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1","AWN1","Awn-1, basic helix-loop-helix protein 093, Regulatory of awn elongation 1, REGULATOR OF AWN ELONGATION 1, Regulator of Awn Elongation 1, Awn4-2",4," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other",null,"TO:0000072 - awn length, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0002734 - awn presence","PO:0025349 - awn ","Os04g0350700","LOC_Os04g28280.1",{"$nulls":6},"_","OsBBX14, BBX14, OsDBB3b, DBB3b","_","B-box-containing protein 14, DOUBLE B-BOX zinc finger gene 3b, DOUBLE B-BOX 3b, B-box protein 14",5," Reproductive organ - Heading date,  Coloration - Anthocyanin,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0010039 - response to iron ion, GO:0010045 - response to nickel ion, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0007623 - circadian rhythm","TO:0000224 - iron sensitivity, TO:0000486 - seed color, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000137 - days to heading, TO:0000071 - anthocyanin content","PO:0020103 - flag leaf , PO:0007632 - seed maturation stage , PO:0009010 - seed , PO:0009006 - shoot system , PO:0020141 - stem node , PO:0025034 - leaf ","Os05g0204600","LOC_Os05g11510.1",{"$nulls":6},"FC1","OsCAD7, fc1, CAD7","FLEXIBLE CULM 1","flexible culm1, FLEXIBLE CULM1, Protein FLEXIBLE CULM 1, Cinnamyl alcohol dehydrogenase 7",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0018456 - aryl-alcohol dehydrogenase activity, GO:0009617 - response to bacterium, GO:0009808 - lignin metabolic process, GO:0044036 - cell wall macromolecule metabolic process, GO:0009626 - plant-type hypersensitive response, GO:0045551 - cinnamyl-alcohol dehydrogenase activity, GO:0008270 - zinc ion binding, GO:0009809 - lignin biosynthetic process, GO:0000166 - nucleotide binding, GO:0009834 - secondary cell wall biogenesis, GO:0048046 - apoplast","TO:0000733 - lignin biosynthesis trait, TO:0000051 - stem strength, TO:0000011 - nitrogen sensitivity","PO:0009047 - stem , PO:0020104 - leaf sheath ","Os04g0612700","LOC_Os04g52280.1","Os01g0918200","Os03g0182800","Os06g0691400",2.3551476,0,null,"SCYL2","OsSCYL2","SCY1-LIKE 2","SCY1-LIKE2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030136 - clathrin-coated vesicle, GO:0005524 - ATP binding, GO:0006898 - receptor-mediated endocytosis, GO:0009658 - chloroplast organization, GO:0004672 - protein kinase activity, GO:0045088 - regulation of innate immune response, GO:0005794 - Golgi apparatus, GO:0005802 - trans-Golgi network, GO:0016192 - vesicle-mediated transport, GO:0009416 - response to light stimulus, GO:0010941 - regulation of cell death, GO:0042742 - defense response to bacterium, GO:0010150 - leaf senescence, GO:0010728 - regulation of hydrogen peroxide biosynthetic process","TO:0000734 - grain length, TO:0000075 - light sensitivity, TO:0000063 - mimic response, TO:0000316 - photosynthetic ability, TO:0000315 - bacterial disease resistance, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000605 - hydrogen peroxide content, TO:0000325 - soluble protein content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000175 - bacterial blight disease resistance","PO:0009005 - root , PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath ","Os01g0616100","LOC_Os01g42950.2, LOC_Os01g42950.1"]
[{"$nulls":24},"Os05g0460600","Os08g0116900","Os08g0116900",0.95192605,1.3238177,null,"Os03g0301800",3.7637236,"Os01g0846800",-1.3124882,{"$nulls":29},"SUI2","OsSUI2, ES5, OsES5","SHORTENED UPPERMOST INTERNODE 2","Shortened Uppermost Internode 2, early leaf senescence 5",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0019827 - stem cell maintenance, GO:0007568 - aging, GO:0009658 - chloroplast organization, GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity, GO:0005789 - endoplasmic reticulum membrane, GO:0006646 - phosphatidylethanolamine biosynthetic process, GO:0048831 - regulation of shoot development, GO:0080006 - internode patterning, GO:0006659 - phosphatidylserine biosynthetic process, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate","PO:0005005 - shoot internode , PO:0007089 - stem elongation stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os05g0554400","LOC_Os05g48060.1",{"$nulls":7},"TIFY5","OsJAZ 2, OsJAZ2, JAZ2, OsTIFY5, OsSTA188","TIFY GENE 5","Jasmonate ZIM-domain protein 2",7," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0005634 - nucleus, GO:0031347 - regulation of defense response",null,"PO:0009066 - anther ","Os07g0153000","LOC_Os07g05830.1",{"$nulls":6},"_","osSRT701, OsSIRT701, OsSRT1, SRT1, OS-SIR2","_","sirtuin 1",4," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005983 - starch catabolic process, GO:0016787 - hydrolase activity, GO:0017136 - NAD-dependent histone deacetylase activity, GO:0033552 - response to vitamin B3, GO:0034355 - NAD salvage, GO:0035067 - negative regulation of histone acetylation, GO:0046872 - metal ion binding, GO:0048316 - seed development, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0046169 - methanol biosynthetic process, GO:0010150 - leaf senescence, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0080134 - regulation of response to stress, GO:0045820 - negative regulation of glycolysis, GO:0070403 - NAD binding, GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process","TO:0002668 - jasmonic acid content, TO:0000653 - seed development trait, TO:0000723 - microsporocyte development trait, TO:0002658 - starch grain synthesis, TO:0000266 - chalky endosperm, TO:0000696 - starch content, TO:0000269 - 100-seed weight, TO:0000180 - spikelet fertility, TO:0000249 - leaf senescence","PO:0001170 - seed development stage ","Os04g0271000","LOC_Os04g20270.1, LOC_Os04g20270.2",{"$nulls":6},"NADP-ME1","NADP-ME, ME6, OschlME, XcrMal1","NADP-MALIC ENZYME 1","\\NADP-dependent malic enzyme, chloroplastic\\\", chloroplastic NADP malic enzyme, plastidic NADP-ME\"",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0004473 - malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, GO:0006108 - malate metabolic process, GO:0009507 - chloroplast, GO:0046872 - metal ion binding, GO:0051287 - NAD or NADH binding",null,null,"Os01g0188400","LOC_Os01g09320.1","Os12g0566300","Os02g0557800","Os08g0155900",2.3513942,0,null,"PAGN1","OsPAGN1","PLANT ARCHITECTURE AND GRAIN NUMBER 1","PLANT ARCHITECTURE and GRAIN NUMBER 1",7," Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0009826 - unidimensional cell growth, GO:0009736 - cytokinin mediated signaling, GO:0044260 - cellular macromolecule metabolic process, GO:0044238 - primary metabolic process, GO:0048316 - seed development","TO:0002660 - cytokinin content, TO:0000396 - grain yield, TO:0000447 - filled grain number, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000653 - seed development trait, TO:0000357 - growth and development trait, TO:0002759 - grain number, TO:0000547 - primary branch number","PO:0025034 - leaf , PO:0009066 - anther , PO:0009047 - stem , PO:0001170 - seed development stage , PO:0007131 - seedling development stage , PO:0009005 - root ","Os07g0421800","LOC_Os07g23970.1"]
[{"$nulls":24},"Os01g0127400","Os08g0160500","Os08g0160500",2.7714949,2.4047902,null,"Os07g0587300",3.7629516,"Os08g0416800",-1.3109422,{"$nulls":29},"CDC48E","OsCDC48E, OsCDC48-2, CDC48-2","CELL DIVISION CONTROL 48E","cell division cycle 48E",10," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0006001 - salt tolerance",null,"Os10g0442600","LOC_Os10g30580.2, LOC_Os10g30580.1",{"$nulls":7},"CCR20","OS-CCR, OsCCR, CCR, OsCCR20, OsCCR14, CCR14","CINNAMOYL-COA REDUCTASE 20","cinnamoyl-CoA reductase, cinnamoyl CoA reductase 20",8," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009411 - response to UV, GO:0009807 - lignan biosynthetic process, GO:0050662 - coenzyme binding, GO:0009834 - secondary cell wall biogenesis, GO:0009809 - lignin biosynthetic process, GO:0044237 - cellular metabolic process, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0003824 - catalytic activity","TO:0000011 - nitrogen sensitivity, TO:0000733 - lignin biosynthesis trait, TO:0000731 - lignin content, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000160 - UV light sensitivity, TO:0000051 - stem strength",null,"Os08g0441500 ","LOC_Os08g34280.1",{"$nulls":6},"GL3.1","OsPPKL1, PPKL1, qGL3, OsPP54, PP54, OsGL3.1, qGL3/OsPPKL1","GRAIN LENGTH 3.1","protein phosphatase with Kelch-like repeat domain 1, grain length 3, Grain Length 3.1, Protein phosphatase 54",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0030145 - manganese ion binding, GO:0005506 - iron ion binding, GO:0009742 - brassinosteroid mediated signaling, GO:0004721 - phosphoprotein phosphatase activity, GO:0005886 - plasma membrane, GO:0009741 - response to brassinosteroid stimulus, GO:0005829 - cytosol","TO:0000734 - grain length, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000346 - tiller number, TO:0002688 - leaf lamina joint bending",null,"Os03g0646900","LOC_Os03g44500.1",{"$nulls":6},"NADP-ME2","OscytME1, OsNADP-ME2-3, NADP-ME2-3","NADP-MALIC ENZYME 2","cytosolic NADP malic enzyme 1",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006108 - malate metabolic process, GO:0004473 - malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, GO:0009507 - chloroplast, GO:0050832 - defense response to fungus, GO:0055114 - oxidation reduction, GO:0051287 - NAD or NADH binding, GO:0046872 - metal ion binding","TO:0000074 - blast disease",null,"Os01g0723400","LOC_Os01g52500.5, LOC_Os01g52500.1, LOC_Os01g52500.2, LOC_Os01g52500.3, LOC_Os01g52500.4","Os01g0210200","Os12g0468600","Os01g0212400",2.3372266,0,null,"EFH1","OsEFH1","EF-HAND FAMILY PROTEIN 1 ","EF-hand family protein 1",3," Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0002237 - response to molecule of bacterial origin, GO:0002238 - response to molecule of fungal origin, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0010200 - response to chitin, GO:0052542 - callose deposition during defense response, GO:0005509 - calcium ion binding","TO:0002759 - grain number, TO:0000074 - blast disease, TO:0000396 - grain yield",null,"Os03g0812800","LOC_Os03g59790.1"]
[{"$nulls":24},"Os01g0343300","Os08g0237000","Os08g0237000",2.4360616,2.0468712,null,"Os01g0827700",3.7598455,"Os02g0759400",-1.3101403,{"$nulls":29},"ES1","TUT1, OsSCAR1, SCAR1, TUT1/OsSCAR1, OsSCAR2, SCAR2","EARLY SENESCENCE 1","early senescence 1, SCAR-like protein 2, suppressor of cAMP receptor 1, TUTOU1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010150 - leaf senescence, GO:0010229 - inflorescence development, GO:0030036 - actin cytoskeleton organization, GO:0009555 - pollen development, GO:0009414 - response to water deprivation, GO:0005856 - cytoskeleton, GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0048653 - anther development, GO:0009737 - response to abscisic acid stimulus, GO:0010118 - stomatal movement, GO:0010148 - transpiration","TO:0000621 - inflorescence development trait, TO:0000566 - stomatal frequency, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000421 - pollen fertility, TO:0000391 - seed size, TO:0000218 - pollen abortion type, TO:0000203 - bacterial leaf streak disease resistance, TO:0000068 - lodging incidence, TO:0000051 - stem strength, TO:0000145 - internode length, TO:0000249 - leaf senescence, TO:0000522 - stomatal conductance, TO:0001018 - transpiration rate","PO:0001083 - inflorescence development stage , PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os01g0208600","LOC_Os01g11040.1",{"$nulls":7},"DRUS2","YK1, OsCrRLK1L5, CrRLK1L5, OsDRUS2, OsMRLK3, MRLK3","DWARF AND RUNTISH SPIKELET2","Catharanthus roseus receptor-like kinase1-like kinase 5, DWARF AND RUNTISH SPIKELET 2, malectin/malectin-like receptor-like kinase 3",1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0019252 - starch biosynthetic process, GO:0048653 - anther development, GO:0043610 - regulation of carbohydrate utilization, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0005618 - cell wall, GO:0005524 - ATP binding","TO:0000564 - spikelet width, TO:0000040 - panicle length, TO:0000187 - anther color, TO:0000531 - anther length, TO:0000180 - spikelet fertility, TO:0000621 - inflorescence development trait, TO:0006036 - stem elongation, TO:0000392 - sterility or fertility trait, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000366 - reproductive growth time, TO:0000547 - primary branch number","PO:0009005 - root , PO:0001004 - anther development stage , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os01g0769700","LOC_Os01g56330.1",{"$nulls":6},"PL","OsMYB55, OsMYB-2, MYB55, MYB-2, OsPL","PURPLE LEAF","R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55, purple leaf",5," Vegetative organ - Leaf,  Coloration - Anthocyanin,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010150 - leaf senescence, GO:0009755 - hormone-mediated signaling, GO:0009408 - response to heat, GO:0003682 - chromatin binding, GO:0030912 - response to deep water, GO:0009718 - anthocyanin biosynthetic process, GO:0003677 - DNA binding, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000524 - submergence tolerance, TO:0002672 - auxin content, TO:0002667 - abscisic acid content, TO:0002668 - jasmonic acid content, TO:0000071 - anthocyanin content, TO:0000734 - grain length, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0002724 - leaf sheath color","PO:0001054 - 4 leaf senescence stage ","Os05g0553400","LOC_Os05g48010.1",{"$nulls":6},"EL5","EL5.1, EL5.2, EL5.3, EL5.4, EL5.5, EL5.6","ELICITOR 5","E3 ubiquitin-protein ligase EL5",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance","GO:0016021 - integral to membrane, GO:0009736 - cytokinin mediated signaling, GO:0005515 - protein binding, GO:0016874 - ligase activity, GO:0008270 - zinc ion binding, GO:0008219 - cell death, GO:0019941 - modification-dependent protein catabolic process, GO:0080033 - response to nitrite",null,null,"Os02g0559800","LOC_Os02g35329.1","Os05g0310800","Os07g0669700","Os03g0195300",2.3209581,0,null,"NPF7.2","OsNPF7.2","NRT1/PTR FAMILY 7.2","nitrate transporter 1/peptide transporter family gene 7.2, NRT1/PTR family 7.2",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005215 - transporter activity, GO:0016021 - integral to membrane, GO:0080055 - low affinity nitrate transport, GO:0009690 - cytokinin metabolic process, GO:0051726 - regulation of cell cycle, GO:0009736 - cytokinin mediated signaling, GO:0048364 - root development, GO:0009705 - plant-type vacuole membrane, GO:0051302 - regulation of cell division","TO:0000227 - root length, TO:0000084 - root number, TO:0000578 - root fresh weight, TO:0000078 - root dry weight, TO:0000011 - nitrogen sensitivity, TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0002660 - cytokinin content, TO:0000656 - root development trait","PO:0009005 - root , PO:0007520 - root development stage ","Os02g0699000","LOC_Os02g47090.1"]
[{"$nulls":24},"Os08g0106000","Os08g0522500","Os08g0522500",1.7137877,1.569142,null,"Os02g0762600",3.7549706,"Os03g0761200",-1.309445,{"$nulls":29},"SDD1","OsSDD1, OsSub26, SUB26","STOMATA DENSITY AND DISTRIBUTION 1","Subtilisin 26, STOMATA DENSITY AND\nDISTRIBUTION1",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010374 - stomatal complex development, GO:0004252 - serine-type endopeptidase activity, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000566 - stomatal frequency",null,"Os03g0143100 ","LOC_Os03g04950.1",{"$nulls":7},"_","JMJ706, OsJMJ706","_","Jumonji 706",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus","TO:0000240 - sterile lemma length, TO:0000622 - flower development trait, TO:0006022 - floral organ development trait",null,"Os10g0577600","LOC_Os10g42690.1",{"$nulls":6},"_","OSINV3, OsINV3, INV3, OsVIN2, VIN2, VINV","_","invertase 3, fructosyl transferase, vacuolar invertase 2",2," Biochemical character,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005987 - sucrose catabolic process, GO:0015770 - sucrose transport, GO:0019252 - starch biosynthetic process, GO:0005773 - vacuole, GO:0005975 - carbohydrate metabolic process, GO:0004575 - sucrose alpha-glucosidase activity, GO:0009505 - plant-type cell wall, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000590 - grain weight, TO:0000657 - spikelet anatomy and morphology trait, TO:0000307 - hexose content, TO:0000300 - glucose content, TO:0000696 - starch content, TO:0000397 - grain size, TO:0000328 - sucrose content, TO:0000391 - seed size","PO:0001170 - seed development stage , PO:0009086 - endocarp ","Os02g0106100","LOC_Os02g01590.2, LOC_Os02g01590.1",{"$nulls":6},"LPS1","SDH2, SDHB, sdhB, RPS14, rps14, sdh2-1, SDH2-RPS14, OsLPS1, OsSDH2-1","LATE PREMATURE SENESCENCE 1","SUCCINATE:UBIQUINONE OXIDOREDUCTASE, mitochondrial succinate dehydrogenase subunit B, ribosomal protein S14, succinate dehydrogenase (iron-sulphur protein subunit), chimeric SDH2-RPS14",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005739 - mitochondrion, GO:0006099 - tricarboxylic acid cycle, GO:0009055 - electron carrier activity, GO:0016491 - oxidoreductase activity, GO:0009658 - chloroplast organization, GO:0007005 - mitochondrion organization, GO:0000104 - succinate dehydrogenase activity, GO:0010150 - leaf senescence, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000249 - leaf senescence, TO:0000040 - panicle length, TO:0002715 - chloroplast development trait, TO:0000447 - filled grain number, TO:0000522 - stomatal conductance, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0000621 - inflorescence development trait, TO:0000639 - seed fertility, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000316 - photosynthetic ability, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content, TO:0006032 - panicle size, TO:0001015 - photosynthetic rate, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0009072 - plant ovary , PO:0000025 - root tip , PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os08g0120000","LOC_Os08g02640.1, LOC_Os08g02640.2, LOC_Os08g02640.3, LOC_Os08g02640.4, LOC_Os08g02640.5","Os01g0798500","Os08g0155400","Os02g0646200",2.3206272,0,null,"SGL","OsSGL","STRESS_TOLERANCE AND GRAIN_LENGTH","STRESS_tolerance and GRAIN_LENGTH",2," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0001558 - regulation of cell growth, GO:0051781 - positive regulation of cell division, GO:0010431 - seed maturation, GO:0009628 - response to abiotic stimulus, GO:0009736 - cytokinin mediated signaling","TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000167 - cytokinin sensitivity, TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000168 - abiotic stress trait","PO:0007632 - seed maturation stage ","Os02g0134200","LOC_Os02g04130.1"]
[{"$nulls":24},"Os07g0513000","Os08g0566400","Os08g0566400",2.2904994,2.9968693,null,"Os10g0109900",3.7539508,"Os06g0113900",-1.3087626,{"$nulls":29},"GUN4","OsGUN4","GENOME UNCOUPLED 4","Genome uncoupled 4, magnesium chelatase (Mg-chelatase) activating factor, magnesium chelatase accessory protein GUN4, magnesium-chelatase accessory protein GUN4",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0046906 - tetrapyrrole binding, GO:0009073 - aromatic amino acid family biosynthetic process, GO:0009965 - leaf morphogenesis, GO:0006098 - pentose-phosphate shunt, GO:0006364 - rRNA processing, GO:0015995 - chlorophyll biosynthetic process, GO:0010019 - chloroplast-nucleus signaling pathway, GO:0030154 - cell differentiation, GO:0010207 - photosystem II assembly, GO:0015979 - photosynthesis, GO:0019344 - cysteine biosynthetic process, GO:0016117 - carotenoid biosynthetic process, GO:0033014 - tetrapyrrole biosynthetic process, GO:0043085 - positive regulation of catalytic activity","TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0001015 - photosynthetic rate, TO:0000496 - carotenoid content",null,"Os11g0267000","LOC_Os11g16550.1",{"$nulls":7},"TMS5","TRZ1, OsTRZ1, OsaTRZ1, OsTMS5","THERMO-SENSITIVE GENIC MALE STERILE 5","tRNase Z1, RNase ZS1, thermo-sensitive genic male sterile 5",2," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042781 - 3'-tRNA processing endoribonuclease activity, GO:0009555 - pollen development, GO:0048653 - anther development, GO:0042780 - tRNA 3'-end processing","TO:0000437 - male sterility, TO:0000053 - pollen sterility, TO:0000067 - genic male sterility-thermo sensitive","PO:0001007 - pollen development stage , PO:0001004 - anther development stage ","Os02g0214300 ","LOC_Os02g12290.1",{"$nulls":6},"_","OsCLP, CLP","_","chitinase-like protein",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits","GO:0048364 - root development, GO:0019722 - calcium-mediated signaling, GO:0045493 - xylan catabolic process, GO:0006508 - proteolysis, GO:0004190 - aspartic-type endopeptidase activity, GO:0048046 - apoplast","TO:0000472 - vascular bundle number, TO:0002655 - starch grain size, TO:0000181 - seed weight, TO:0000304 - seed thickness, TO:0000370 - leaf width, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000484 - seed shape, TO:0006036 - stem elongation, TO:0000227 - root length, TO:0000640 - total root number, TO:0000656 - root development trait","PO:0001031 - 4 root elongation stage , PO:0007520 - root development stage , PO:0007033 - whole plant development stage , PO:0007089 - stem elongation stage , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009005 - root , PO:0009047 - stem , PO:0009046 - flower , PO:0020104 - leaf sheath ","Os01g0937050","LOC_Os01g71080.1",{"$nulls":6},"RIM1","ONAC054, ONAC54, NAC54, ONAC054alpha, ONAC054beta","RICE DWARF VIRUS MULTIPLICATION 1","NAC domain-containing protein 054, NAC domain-containing protein 54",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0003700 - transcription factor activity","TO:0000326 - leaf color, TO:0000447 - filled grain number, TO:0000148 - viral disease resistance, TO:0000173 - ethylene sensitivity, TO:0000316 - photosynthetic ability, TO:0000152 - panicle number, TO:0002667 - abscisic acid content, TO:0000249 - leaf senescence, TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility, TO:0000227 - root length, TO:0000172 - jasmonic acid sensitivity","PO:0001054 - 4 leaf senescence stage ","Os03g0119966","LOC_Os03g02800.1","Os01g0804200","Os08g0468700","Os03g0150200",2.3066485,0,null,"_","GN2, GN2.1, GN2.2","_","grain number 2, GRAINS NUMBER 2",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity",null,"TO:0002759 - grain number, TO:0000207 - plant height, TO:0000137 - days to heading"]
[{"$nulls":24},"Os01g0171000","Os09g0422500","Os09g0422500",3.34322,1.567009,null,"Os06g0149100",3.7512996,"Os06g0176000",-1.3079978,{"$nulls":29},"LHP1","OsLHP1","LIKE HETEROCHROMATIN PROTEIN 1","LHP1 homolog",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Plant growth activity","GO:0032350 - regulation of hormone metabolic process, GO:0021700 - developmental maturation, GO:0009755 - hormone-mediated signaling, GO:0000791 - euchromatin, GO:0005720 - nuclear heterochromatin, GO:0010050 - vegetative phase change, GO:0016246 - RNA interference, GO:0007346 - regulation of mitotic cell cycle, GO:0000956 - nuclear-transcribed mRNA catabolic process, GO:0048573 - photoperiodism, flowering, GO:0010321 - regulation of vegetative phase change, GO:0045857 - negative regulation of molecular function, epigenetic, GO:0009910 - negative regulation of flower development, GO:0009825 - multidimensional cell growth, GO:0006346 - methylation-dependent chromatin silencing, GO:0051567 - histone H3-K9 methylation, GO:0031048 - chromatin silencing by small RNA, GO:0003935 - GTP cyclohydrolase II activity, GO:0003677 - DNA binding, GO:0010016 - shoot morphogenesis, GO:0006351 - transcription, DNA-dependent, GO:0009507 - chloroplast, GO:0010048 - vernalization response, GO:0010150 - leaf senescence, GO:0070734 - histone H3-K27 methylation","TO:0000207 - plant height, TO:0000370 - leaf width, TO:0000135 - leaf length, TO:0000241 - leaf number, TO:0000735 - plastochron, TO:0000249 - leaf senescence, TO:0000346 - tiller number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000357 - growth and development trait, TO:0000476 - growth hormone content","PO:0001054 - 4 leaf senescence stage ","Os10g0324900","LOC_Os10g17770.1",{"$nulls":7},"_","OsbHLH108, OsbHLH108/SPT, bHLH108, SPT","_","basic helix-loop-helix protein 108, OsSPATULA, SPATULA",6," Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development","TO:0000622 - flower development trait","PO:0009049 - inflorescence , PO:0007615 - flower development stage ","Os06g0164400","LOC_Os06g06900.1",{"$nulls":6},"PHO1","Pho1, OsPho1, OsPHOL, PHOL","STARCH PHOSPHORYLASE 1","Starch phosphorylase 1, plastidial starch phosphorylase1, plastidial starch phosphorylase 1, Plastidic a-1, 4-glucan phosphorylase 2, starch phosphorylase L",3," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009570 - chloroplast stroma, GO:0019252 - starch biosynthetic process, GO:0009312 - oligosaccharide biosynthetic process, GO:0009960 - endosperm development, GO:0010581 - regulation of starch biosynthetic process, GO:0005975 - carbohydrate metabolic process, GO:0009414 - response to water deprivation, GO:0008184 - glycogen phosphorylase activity, GO:0030170 - pyridoxal phosphate binding, GO:0009266 - response to temperature stimulus","TO:0002658 - starch grain synthesis","PO:0009089 - endosperm ","Os03g0758100","LOC_Os03g55090.1",{"$nulls":6},"OPR1","OsOPR1, OsOPR2, OsOPR11, OsOPR06-6, OPDAR1, OsOPR, OPDAR","12-OXOPHYTODIENOATE REDUCTASE 1","12-oxo-phytodienoic acid reductase 1, OPDA reductase",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0010181 - FMN binding, GO:0006952 - defense response, GO:0009695 - jasmonic acid biosynthetic process","TO:0000259 - heat tolerance, TO:0002668 - jasmonic acid content, TO:0000276 - drought tolerance, TO:0000432 - temperature response trait, TO:0006001 - salt tolerance","PO:0009051 - spikelet ","Os06g0216300","LOC_Os06g11290.1","Os01g0297200","Os08g0135400","Os02g0187800",2.2997735,0,null,"DG1",null,"DEFECTIVE GLUME 1 ","defective glume 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0001558 - regulation of cell growth, GO:0009908 - flower development","TO:0002677 - brassinosteroid sensitivity, TO:0000622 - flower development trait, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000206 - leaf angle, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0002601 - stamen size, TO:0000215 - stamen anatomy and morphology trait, TO:0006012 - carpel anatomy and morphology trait, TO:0000162 - seed quality, TO:0000402 - grain width","PO:0007615 - flower development stage , PO:0007600 - floral organ differentiation stage "]
[{"$nulls":24},"Os04g0551200","Os09g0433000","Os09g0433000",2.9014251,2.8307736,null,"Os12g0117900",3.747835,"Os11g0667700",-1.307413,{"$nulls":29},"_","OspPLAIIIalpha, pPLAIIIalpha","_","Patatin-related phospholipase A III alpha",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits","GO:0009739 - response to gibberellin stimulus, GO:0008112 - nicotinamide N-methyltransferase activity, GO:0080113 - regulation of seed growth, GO:0080112 - seed growth, GO:0048366 - leaf development, GO:0016042 - lipid catabolic process, GO:0016787 - hydrolase activity, GO:0030244 - cellulose biosynthetic process","TO:0000040 - panicle length, TO:0000135 - leaf length, TO:0000166 - gibberellic acid sensitivity, TO:0000146 - seed length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000227 - root length, TO:0000655 - leaf development trait, TO:0000653 - seed development trait","PO:0007030 - seedling shoot emergence stage ","Os03g0254400 ","LOC_Os03g14950.1",{"$nulls":7},"_","CAX2, OsCAX2, OsCAX4, CAX4, OsSTA47, OsNCX3, NCX3","_","Vacuolar cation/proton exchanger 2, Ca(2+)/H(+) exchanger 2, cation/H+ exchanger 2, vacuolar cation/H+ exchanger 4, Na+/Ca2+ Exchanger 3, Sodium/calcium exchanger 3",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0006979 - response to oxidative stress, GO:0009411 - response to UV, GO:0009414 - response to water deprivation, GO:0015369 - calcium:hydrogen antiporter activity, GO:0051592 - response to calcium ion, GO:0046686 - response to cadmium ion, GO:0006828 - manganese ion transport, GO:0015691 - cadmium ion transport, GO:0005886 - plasma membrane, GO:0055073 - cadmium ion homeostasis, GO:0009705 - plant-type vacuole membrane, GO:0070588 - calcium ion transmembrane transport, GO:0016021 - integral to membrane","TO:0002657 - oxidative stress, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000160 - UV light sensitivity","PO:0020121 - lateral root , PO:0020127 - primary root , PO:0009005 - root , PO:0025034 - leaf , PO:0009066 - anther ","Os02g0138900","LOC_Os02g04630.1",{"$nulls":6},"MIR168A","miR168a, osa-miR168a, osa-MIR168a osa-miR168a-3p osa-miR168a-5p, OsMIR168a","MICRORNA168A","MICRORNA168a, osa-miRNA168a",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0048573 - photoperiodism, flowering, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling","TO:0000202 - germination ratio, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0002768 - spikelet length, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability",{"$nulls":9},"OPR4","OsOPR4, OsOPR10, OsOPR06-3","12-OXOPHYTODIENOATE REDUCTASE 4","12-oxo-phytodienoic acid reductase 4",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0031408 - oxylipin biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0010181 - FMN binding, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000432 - temperature response trait",null,"Os06g0215900","LOC_Os06g11240.1","Os04g0530900","Os03g0272300","Os04g0613000",2.2946336,0,null,"DHHC1","OsDHHC1, OsPAT15, PAT15","DHHC-TYPE ZINC FINGER PROTEIN 1","DHHC-type zinc finger protein 1, Protein S-acyltransferase 15",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019706 - protein-cysteine S-palmitoleyltransferase activity, GO:0009416 - response to light stimulus, GO:0016021 - integral to membrane","TO:0000396 - grain yield, TO:0000265 - light quality sensitivity, TO:0000346 - tiller number","PO:0007073 - 2 formation of axillary shoot stage , PO:0009009 - plant embryo , PO:0025034 - leaf ","Os02g0819100 ","LOC_Os02g57370.1"]
[{"$nulls":24},"Os04g0269600","Os10g0467800","Os10g0467800",7.1616282,6.027947,null,"Os01g0125600",3.741105,"Os06g0151800",-1.3040417,{"$nulls":29},"BAK1","OsI-BAK1, I-BAK1, OsBAK1","BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED KINASE 1","brassinosteroid insensitive 1-associated kinase 1",3," Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance","GO:0009611 - response to wounding, GO:0009737 - response to abscisic acid stimulus, GO:0048366 - leaf development, GO:0009742 - brassinosteroid mediated signaling, GO:0009960 - endosperm development, GO:0009790 - embryonic development, GO:0005886 - plasma membrane, GO:0002213 - defense response to insect, GO:0010431 - seed maturation, GO:0009753 - response to jasmonic acid stimulus, GO:0016301 - kinase activity","TO:0000172 - jasmonic acid sensitivity, TO:0000064 - embryo related trait, TO:0000424 - brown planthopper resistance, TO:0000205 - white-backed planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000189 - embryoless, TO:0000028 - unfilled grain number, TO:0000655 - leaf development trait, TO:0002661 - seed maturation, TO:0002677 - brassinosteroid sensitivity","PO:0007631 - plant embryo stage , PO:0007632 - seed maturation stage , PO:0001050 - leaf development stage , PO:0007633 - endosperm development stage ","Os03g0440900","LOC_Os03g32580.1",{"$nulls":7},"CNGC6","OsCNGC6, OsCNGC4, OsSTA107","CYCLIC NUCLEOTIDE GATED CHANNEL 6","Cyclic nucleotide gated channel 6, Cyclic nucleotide-gated ion channel 4",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0046686 - response to cadmium ion, GO:0005249 - voltage-gated potassium channel activity, GO:0034765 - regulation of ion transmembrane transport, GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0005886 - plasma membrane","TO:0000173 - ethylene sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000315 - bacterial disease resistance","PO:0009066 - anther ","Os03g0646300","LOC_Os03g44440.1",{"$nulls":6},"MFT2","OsMFT2, OsMFT","MOTHER OF FT AND TFL 2","MFT-like gene 2",1," Seed - Physiological traits - Dormancy,  Character as QTL - Germination","GO:0048623 - seed germination on parent plant, GO:0005634 - nucleus, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0010187 - negative regulation of seed germination, GO:0048316 - seed development, GO:0010030 - positive regulation of seed germination, GO:0009737 - response to abscisic acid stimulus","TO:0002667 - abscisic acid content, TO:0000253 - seed dormancy, TO:0000653 - seed development trait, TO:0000615 - abscisic acid sensitivity","PO:0001170 - seed development stage , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009010 - seed ","Os01g0111600","LOC_Os01g02120.1",{"$nulls":6},"OPR5","OsOPR5, OsOPR6, OsOPR06-2, OPR4","12-OXOPHYTODIENOATE REDUCTASE 5","12-oxo-phytodienoic acid reductase 5",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010181 - FMN binding, GO:0016491 - oxidoreductase activity, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0031408 - oxylipin biosynthetic process, GO:0009651 - response to salt stress, GO:0009695 - jasmonic acid biosynthetic process, GO:0050832 - defense response to fungus","TO:0006001 - salt tolerance, TO:0000074 - blast disease",null,"Os06g0215600","LOC_Os06g11210.1","Os03g0214400","Os02g0626100","Os05g0373300",2.2896612,0,null,"AK1","OsAK1","ADENYLATE KINASE 1","adenylate kinase 1",8," Biochemical character,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0004017 - adenylate kinase activity, GO:0010109 - regulation of photosynthesis, GO:0009658 - chloroplast organization, GO:0009570 - chloroplast stroma","TO:0000201 - panicle color, TO:0002724 - leaf sheath color, TO:0000447 - filled grain number, TO:0000316 - photosynthetic ability, TO:0002715 - chloroplast development trait, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000371 - yield trait, TO:0000495 - chlorophyll content",null,"Os08g0109300","LOC_Os08g01770.1, LOC_Os08g01770.2"]
[{"$nulls":24},"Os05g0405000","Os11g0638000","Os11g0638000",1.9685267,1.5003601,null,"Os05g0586400",3.7398136,"Os01g0685400",-1.3034965,{"$nulls":29},"GW7","GL7, OsGL7, OsGW7, qGW7, qGL7, SLG7, GL7/GW7/SLG7, qPY7, GL7/SLG7","GRAIN LENGTH 7","Grain Length on Chromosome 7, grain width QTL on chromosome 7, Slender grain on chromosome 7",7," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009826 - unidimensional cell growth, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0000382 - 1000-seed weight, TO:0000371 - yield trait, TO:0000162 - seed quality, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0002757 - flag leaf length, TO:0000397 - grain size, TO:0002731 - grain length to width ratio","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os07g0603300","LOC_Os07g41200.1",{"$nulls":7},"CNGC16","OsCNGC16, OsCNGC8, OsSTA273","CYCLIC NUCLEOTIDE GATED CHANNEL 16","Cyclic nucleotide gated channel 16, Cyclic nucleotide-gated ion channel 8",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0034765 - regulation of ion transmembrane transport, GO:0042742 - defense response to bacterium, GO:0016021 - integral to membrane, GO:0005249 - voltage-gated potassium channel activity, GO:0005886 - plasma membrane, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus","TO:0000173 - ethylene sensitivity, TO:0000315 - bacterial disease resistance, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity","PO:0009066 - anther ","Os12g0163000","LOC_Os12g06570.1",{"$nulls":6},"HSP71.1","OsHsp71.1, OsHSP71.1, OsMED37_3, MED37_3","71.1 KDA CLASS I HEAT SHOCK PROTEIN","71.1 kDa heat shock protein, 71.1-kD heat shock protein, Mediator 37_3",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0046686 - response to cadmium ion, GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0009409 - response to cold","TO:0000396 - grain yield, TO:0000653 - seed development trait, TO:0000382 - 1000-seed weight, TO:0000303 - cold tolerance, TO:0000402 - grain width","PO:0001170 - seed development stage ","Os03g0276500","LOC_Os03g16860.1, LOC_Os03g16860.2",{"$nulls":6},"OPR6","OsOPR6, OsOPR4, OsOPR06-1","12-OXOPHYTODIENOATE REDUCTASE 6","12-oxo-phytodienoic acid reductase 6",6," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0010181 - FMN binding, GO:0050832 - defense response to fungus, GO:0016491 - oxidoreductase activity, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0031408 - oxylipin biosynthetic process","TO:0000074 - blast disease",null,"Os06g0215500","LOC_Os06g11200.1","Os03g0251000","Os01g0124650","Os09g0376800",2.2896526,0,null,"_","PigmR","_","Magnaporthe grisea resistance-gmR, Blast resistance gmR",6," Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus","TO:0000396 - grain yield, TO:0000382 - 1000-seed weight, TO:0000180 - spikelet fertility, TO:0000074 - blast disease, TO:0000590 - grain weight"]
[{"$nulls":24},"Os08g0106300","Os03g0246800","Os03g0246800",-1.0345608,-1.0353475,null,"Os08g0562500",3.7348995,"Os12g0635500",-1.3030981,{"$nulls":29},"HDY1","OsFdC2, FdC2, OsHDY1, PetF-2","HEADING DATE DELAY AND YELLOWISH LEAF 1","ferredoxin-like protein with C-terminal extension 2, Ferredoxin C2, Ferredoxin-2",3," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll","GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009507 - chloroplast, GO:0009055 - electron carrier activity, GO:0006098 - pentose-phosphate shunt, GO:0010103 - stomatal complex morphogenesis, GO:0048573 - photoperiodism, flowering, GO:0009688 - abscisic acid biosynthetic process, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0046872 - metal ion binding, GO:0022900 - electron transport chain","TO:0001015 - photosynthetic rate, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000137 - days to heading, TO:0000295 - chlorophyll-b content","PO:0025034 - leaf ","Os03g0685000 ","LOC_Os03g48040.1, LOC_Os03g48040.2",{"$nulls":7},"CNGC17","OsCNGC17, OsCNGC5, OsSTA282","CYCLIC NUCLEOTIDE GATED CHANNEL 17","Cyclic nucleotide gated channel 17, Cyclic nucleotide-gated ion channel 5",12," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009735 - response to cytokinin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0009409 - response to cold, GO:0005886 - plasma membrane","TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000167 - cytokinin sensitivity","PO:0009066 - anther ","Os12g0468500","LOC_Os12g28260.1",{"$nulls":6},"GS5","OsSCP26, SCP26, OsGS5","GRAIN SIZE 5","serine carboxypeptidase 26, Grain Size 5",5," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0006508 - proteolysis, GO:0004185 - serine-type carboxypeptidase activity","TO:0002661 - seed maturation, TO:0000734 - grain length, TO:0000402 - grain width, TO:0000397 - grain size, TO:0000590 - grain weight",null,"Os05g0158500","LOC_Os05g06660.1, LOC_Os05g06660.2",{"$nulls":6},"OG1","OsOPR7, OPR7, OsOPR13, OsOPR3, OsOPR5, OsOPR9, OsOPR08-1, OPR13, OPR3, OPR5, OPR9, OPR08-1","OPEN GLUME1","12-oxo-phytodienoic acid reductase 7, 12-oxophytodienoate reductase7, OPDA reductase 7, open glume 1",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010181 - FMN binding, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0008643 - carbohydrate transport, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0051607 - defense response to virus, GO:0005777 - peroxisome, GO:0009695 - jasmonic acid biosynthetic process","TO:0002668 - jasmonic acid content, TO:0000020 - black streak dwarf virus resistance, TO:0000696 - starch content, TO:0000184 - seed anatomy and morphology trait","PO:0007616 - flowering stage , PO:0009036 - lodicule , PO:0009039 - glume ","Os08g0459600","LOC_Os08g35740.2, LOC_Os08g35740.1","Os04g0612500","Os05g0518600","Os01g0648000",2.284609,0,null,"_","PigmS","_","Magnaporthe grisea resistance-gmS, Blast resistance gmS",6," Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus, GO:0031348 - negative regulation of defense response","TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000180 - spikelet fertility, TO:0000074 - blast disease, TO:0000382 - 1000-seed weight"]
[{"$nulls":24},"Os03g0279700","Os05g0552300","Os05g0552300",-2.242906,-1.2935623,null,"Os05g0163300",3.7323112,"Os02g0666800",-1.3027817,{"$nulls":29},"YS53","GSA, GSAT, HEML, OsGSA, OsGSAT, OsHEML, OsGSAM, GSAM, OsYS53","_","\\Glutamate-1-semialdehyde 2, 1-aminomutase\\\", Glutamate-1-semialdehyde aminotransferase\"",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity","GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity, GO:0033014 - tetrapyrrole biosynthetic process, GO:0009658 - chloroplast organization, GO:0006782 - protoporphyrinogen IX biosynthetic process, GO:0009651 - response to salt stress, GO:0008483 - transaminase activity, GO:0009507 - chloroplast, GO:0015995 - chlorophyll biosynthetic process, GO:0030170 - pyridoxal phosphate binding, GO:0010109 - regulation of photosynthesis","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000316 - photosynthetic ability, TO:0006001 - salt tolerance, TO:0001027 - net photosynthetic rate, TO:0002715 - chloroplast development trait, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000496 - carotenoid content, TO:0000455 - seed set percent, TO:0000456 - spikelet number, TO:0000152 - panicle number","PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009005 - root ","Os08g0532200 ","LOC_Os08g41990.1",{"$nulls":7},"GIF1","OsGIF1","GRF-INTERACTING FACTOR 1","GRF-interacting factor 1",11," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000240 - sterile lemma length, TO:0000397 - grain size",null,"Os11g0615200","LOC_Os11g40100.3, LOC_Os11g40100.2, LOC_Os11g40100.1",{"$nulls":6},"ESG1","ABCI10, OsABCI10, OsABCI10_1, OsABCI10_2, OsESG1","ENLARGED STARCH GRAIN 1","ABC transporter superfamily ABCI subgroup member 10, enlarged starch grain1",4," Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0019375 - galactolipid biosynthetic process, GO:0009414 - response to water deprivation, GO:0009707 - chloroplast outer membrane, GO:0006869 - lipid transport, GO:0048316 - seed development, GO:0009660 - amyloplast organization, GO:0033097 - amyloplast membrane, GO:0031969 - chloroplast membrane","TO:0000104 - floury endosperm, TO:0002655 - starch grain size, TO:0000162 - seed quality, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content","PO:0001170 - seed development stage ","Os04g0553000","LOC_Os04g46700.1, LOC_Os04g46700.2",{"$nulls":6},"OPR8","OsOPR8, OsOPR7, OsOPR02-1","12-OXOPHYTODIENOATE REDUCTASE 8","12-oxo-phytodienoic acid reductase 8",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0016491 - oxidoreductase activity, GO:0010181 - FMN binding, GO:0031408 - oxylipin biosynthetic process, GO:0016629 - 12-oxophytodienoate reductase activity",null,null,"Os02g0559400","LOC_Os02g35310.1","Os04g0305700","Os06g0340200","Os01g0286600",2.2777152,0,null,"_","OsLBD37, LBD37","_","LATERAL ORGAN BOUNDARIES DOMAIN 37, lateral organ boundaries domain protein 37",3," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0048511 - rhythmic process, GO:0003700 - transcription factor activity, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000207 - plant height, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000371 - yield trait",null,"Os03g0445700","LOC_Os03g33090.1"]
[{"$nulls":24},"Os01g0225600","Os07g0408100","Os07g0408100",-1.2273825,-1.52917,null,"Os03g0633800",3.7268476,"Os02g0513000",-1.302646,{"$nulls":29},"AL3","OsClp8, CLP8, OsClpR1, ClpR1","ALBINO LETHAL 3","Clp protease 8, CLP PROTEASE 8, albino lethal 3, CLP PROTEASE PROTEOLYTIC SUBUNIT 1, Plastid caseinolytic protease R1",5," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0009534 - chloroplast thylakoid, GO:0004252 - serine-type endopeptidase activity, GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0009941 - chloroplast envelope, GO:0009840 - chloroplastic endopeptidase Clp complex, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0009536 - plastid","TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content","PO:0009005 - root , PO:0025034 - leaf , PO:0009049 - inflorescence ","Os05g0592100","LOC_Os05g51450.1",{"$nulls":7},"_","GAPDH, OsGAPDH, OsGapC2","_","Glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2",4," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0050661 - NADP or NADPH binding, GO:0009506 - plasmodesma, GO:0005886 - plasma membrane, GO:0005739 - mitochondrion, GO:0004365 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, GO:0009507 - chloroplast, GO:0042742 - defense response to bacterium, GO:0046686 - response to cadmium ion, GO:0006979 - response to oxidative stress, GO:0006096 - glycolysis, GO:0008270 - zinc ion binding, GO:0048653 - anther development, GO:0005730 - nucleolus, GO:0005618 - cell wall, GO:0051287 - NAD or NADH binding, GO:0005507 - copper ion binding",null,"PO:0001004 - anther development stage ","Os04g0486600","LOC_Os04g40950.1, LOC_Os04g40950.2, LOC_Os04g40950.3",{"$nulls":6},"PFPB","OsPFPB, OsPFP-B, PFP-B, PFPbeta","PYROPHOSPHATE-DEPENDENT PHOSPHOFRUCOKINASE BETA-SUBUNIT","pyrophosphate-dependent phosphofrucokinase beta-subunit, PFP beta-subunit, Pyrophosphate-Fru-6-P1-phosphotransferase, Pyrophosphate: fructose-6-phosphate 1-phosphotransferase beta subunit, PFP beta subunit, PFPase beta subunit, regulatory b-subunit of PFP1, Pyrophosphate-fructose 6-phosphate 1-phosphotransferase beta subunit",6," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0015979 - photosynthesis, GO:0016020 - membrane, GO:0046872 - metal ion binding, GO:0046686 - response to cadmium ion, GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity, GO:0010581 - regulation of starch biosynthetic process, GO:0034059 - response to anoxia, GO:0006002 - fructose 6-phosphate metabolic process, GO:0005945 - 6-phosphofructokinase complex, GO:0003872 - 6-phosphofructokinase activity, GO:0005524 - ATP binding, GO:0009790 - embryonic development, GO:0009960 - endosperm development, GO:0005618 - cell wall, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0006096 - glycolysis, GO:0009793 - embryonic development ending in seed dormancy, GO:0080050 - regulation of seed development","TO:0006005 - fructose content, TO:0000713 - brittle endosperm, TO:0000592 - 1000-dehulled grain weight, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000449 - grain yield per plant, TO:0000104 - floury endosperm, TO:0000300 - glucose content, TO:0000382 - 1000-seed weight, TO:0000696 - starch content, TO:0000482 - chemical stress sensitivity, TO:0000390 - grain core percent white, TO:0000598 - protein content, TO:0000602 - total fat content, TO:0000328 - sucrose content, TO:0002655 - starch grain size, TO:0002656 - starch grain shape, TO:0002661 - seed maturation, TO:0000399 - grain thickness, TO:0000620 - embryo development trait, TO:0002658 - starch grain synthesis","PO:0009089 - endosperm ","Os06g0247500","LOC_Os06g13810.3, LOC_Os06g13810.1",{"$nulls":6},"OPR10","OsOPR10, OsOPR12, OsOPR01-1","12-OXOPHYTODIENOATE REDUCTASE 10","12-oxo-phytodienoic acid reductase 10",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0016491 - oxidoreductase activity, GO:0016629 - 12-oxophytodienoate reductase activity, GO:0010181 - FMN binding, GO:0031408 - oxylipin biosynthetic process","TO:0006001 - salt tolerance",null,"Os01g0369900","LOC_Os01g27230.1","Os04g0672100","Os06g0172800","Os05g0595000",2.2776248,0,null,"LBD38","OsLBD38, HINGE2, OsHINGE2","LATERAL ORGAN BOUNDARIES DOMAIN 38","lateral organ boundaries domain protein 38, Highly Induced by Nitrate Gene 2",3," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048511 - rhythmic process, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0010167 - response to nitrate, GO:2000028 - regulation of photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000447 - filled grain number, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000040 - panicle length",null,"Os03g0609500","LOC_Os03g41330.1"]
[{"$nulls":24},"Os09g0546900","Os01g0540300","Os01g0540300",3.3345985,2.1408327,null,"Os06g0661766",3.725547,"Os01g0665900",-1.3021959,{"$nulls":29},"_",null,"_","Clathrin heavy chain binding",12," Vegetative organ - Leaf","GO:0030130 - clathrin coat of trans-Golgi network vesicle, GO:0030132 - clathrin coat of coated pit, GO:0006886 - intracellular protein transport, GO:0005198 - structural molecule activity, GO:0016192 - vesicle-mediated transport","TO:0002681 - leaf curling",null,"Os12g0104800/Os12g0104766","LOC_Os12g01390.1",{"$nulls":7},"_","OsETOL1, OsSTA97, ETOL1, STA97","_","ETHYLENE OVERPRODUCER 1-like gene 1",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016036 - cellular response to phosphate starvation, GO:0017145 - stem cell division, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0008361 - regulation of cell size, GO:0010364 - regulation of ethylene biosynthetic process","TO:0000524 - submergence tolerance, TO:0000227 - root length, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009066 - anther ","Os03g0294700","LOC_Os03g18360.1",{"$nulls":6},"OAT","OsOAT, delta-OAT","ORNITHINE DELTA-AMINOTRANSFERASE","ornithine delta-aminotransferase, ornithine aminotransferase",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006593 - ornithine catabolic process, GO:0009741 - response to brassinosteroid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0019544 - arginine catabolic process to glutamate, GO:0030170 - pyridoxal phosphate binding, GO:0042538 - hyperosmotic salinity response, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0006979 - response to oxidative stress, GO:0005759 - mitochondrial matrix, GO:0004587 - ornithine-oxo-acid transaminase activity, GO:0008270 - zinc ion binding, GO:0009856 - pollination, GO:0009901 - anther dehiscence, GO:0009908 - flower development, GO:0006561 - proline biosynthetic process, GO:0009414 - response to water deprivation, GO:0009413 - response to flooding","TO:0000095 - osmotic response sensitivity, TO:0000622 - flower development trait, TO:0006002 - proline content, TO:0002673 - amino acid content, TO:0020034 - glume width, TO:0000180 - spikelet fertility, TO:0000474 - glume opening, TO:0020033 - glume length, TO:0000484 - seed shape","PO:0007615 - flower development stage ","Os03g0643300","LOC_Os03g44150.1",{"$nulls":6},"AOS2","OsAOS2, CYP74A2, OsAOS, OsAOS1","ALLENE OXIDE SYNTHASE 2","Allene oxide synthase 2, Cytochrome P450 74A2, Hydroperoxide dehydrase 2, allene oxide synthase-1",3," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0080027 - response to herbivore, GO:0042742 - defense response to bacterium, GO:0047987 - hydroperoxide dehydratase activity, GO:0031408 - oxylipin biosynthetic process, GO:0020037 - heme binding, GO:0010106 - cellular response to iron ion starvation, GO:0051365 - cellular response to potassium ion starvation, GO:0004497 - monooxygenase activity, GO:0002213 - defense response to insect, GO:0009695 - jasmonic acid biosynthetic process, GO:0009055 - electron carrier activity","TO:0000031 - silicon sensitivity, TO:0000224 - iron sensitivity, TO:0000008 - potassium sensitivity, TO:0000261 - insect damage resistance, TO:0000424 - brown planthopper resistance, TO:0002668 - jasmonic acid content, TO:0000175 - bacterial blight disease resistance",null,"Os03g0225900","LOC_Os03g12500.1","Os03g0270500","Os03g0348900","Os01g0357100",2.2584693,0,null,"_","Gn8.1","_","grain number 8.1",null," Reproductive organ - panicle,  Character as QTL - Yield and productivity",null,"TO:0006032 - panicle size, TO:0002759 - grain number"]
[{"$nulls":24},"Os01g0859400","Os03g0796800","Os03g0796800",-1.5146896,-0.97959137,null,"Os09g0437100",3.716499,"Os03g0787000",-1.30061,{"$nulls":29},"IPI","OsIPI, ipi, OsIPPI1, IPPI1","ISOPENTENYL DIPHOSPHATE ISOMERASE","isopentenyl diphosphate isomerase, IPP isomerase, isopentenyl diphosphate isomerase 1",7," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005777 - peroxisome, GO:0005783 - endoplasmic reticulum, GO:0004452 - isopentenyl-diphosphate delta-isomerase activity, GO:0009416 - response to light stimulus, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0016787 - hydrolase activity, GO:0008299 - isoprenoid biosynthetic process, GO:0005739 - mitochondrion","TO:0000495 - chlorophyll content, TO:0000075 - light sensitivity, TO:0000496 - carotenoid content, TO:0000326 - leaf color",null,"Os07g0546000","LOC_Os07g36190.1",{"$nulls":7},"_","mago, OsMAGO2, MAGO2","_","mago nashi, Mago protein, Mago nashi protein, rice mago nashi homolog, MAGO NASHI 2",12," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009908 - flower development, GO:0006950 - response to stress","TO:0000622 - flower development trait, TO:0000164 - stress trait, TO:0000215 - stamen anatomy and morphology trait",null,"Os12g0287200","LOC_Os12g18880.1",{"$nulls":6},"CYCB1;1","CycB1;1, CycB1;os;1, Orysa;CycB1;1, OsCycB1;1, CyclaZm, CYCIaZm, OsCYCIaZm, OsCYCB1;4","CYCLIN-B1-1","B-type cyclin 1;1",1," Biochemical character,  Seed - Morphological traits - Endosperm","GO:0007049 - cell cycle, GO:0051301 - cell division, GO:0007088 - regulation of mitosis, GO:0005634 - nucleus, GO:0000079 - regulation of cyclin-dependent protein kinase activity, GO:0009960 - endosperm development","TO:0000653 - seed development trait, TO:0000575 - endosperm related trait, TO:0000587 - endosperm quality",null,"Os01g0805600","LOC_Os01g59120.1",{"$nulls":6},"AOC","OsAOC, AOC1, OsAOC1, HB, CPM2","ALLENE OXIDE CYCLASE","allene oxide cyclase, coleoptile photomorphogenesis 2, hebiba, hebibaAOC",3," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009570 - chloroplast stroma, GO:0009535 - chloroplast thylakoid membrane, GO:0009620 - response to fungus, GO:0009695 - jasmonic acid biosynthetic process, GO:0016853 - isomerase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009941 - chloroplast envelope, GO:0005886 - plasma membrane, GO:0009269 - response to desiccation, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0010319 - stromule, GO:0046423 - allene-oxide cyclase activity","TO:0002668 - jasmonic acid content, TO:0000112 - disease resistance, TO:0001007 - coleoptile length, TO:0000544 - mesocotyl length, TO:0000074 - blast disease","PO:0009051 - spikelet ","Os03g0438100","LOC_Os03g32314.1","Os01g0845100","Os08g0198900","Os03g0122300",2.235305,0,null,"_",null,"_","cytochrome c",1," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen, GO:0046872 - metal ion binding, GO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c, GO:0020037 - heme binding, GO:0009055 - electron carrier activity, GO:0005758 - mitochondrial intermembrane space","TO:0000346 - tiller number, TO:0000207 - plant height",null,"Os01g0885000 ","LOC_Os01g66180.1, LOC_Os01g66180.2"]
[{"$nulls":24},"Os09g0361500","Os08g0364900","Os08g0364900",-3.623029,-1.9497353,null,"Os09g0532900",3.715037,"Os08g0440300",-1.3003114,{"$nulls":29},"YGL9","OscpSRP43, cpSRP43, PGL3","YELLOW-GREEN LEAF 9","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Coloration - Others,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005786 - signal recognition particle, endoplasmic reticulum targeting, GO:0080085 - signal recognition particle, chloroplast targeting, GO:0048573 - photoperiodism, flowering, GO:0015995 - chlorophyll biosynthetic process, GO:0010150 - leaf senescence, GO:0009507 - chloroplast, GO:0010218 - response to far red light, GO:0042440 - pigment metabolic process, GO:0009941 - chloroplast envelope, GO:0009760 - C4 photosynthesis, GO:0009658 - chloroplast organization, GO:0010114 - response to red light, GO:0010155 - regulation of proton transport, GO:0009744 - response to sucrose stimulus, GO:0009637 - response to blue light, GO:0015994 - chlorophyll metabolic process, GO:0009535 - chloroplast thylakoid membrane, GO:0045038 - protein import into chloroplast thylakoid membrane, GO:0046777 - protein amino acid autophosphorylation, GO:0016116 - carotenoid metabolic process, GO:0019344 - cysteine biosynthetic process, GO:0015979 - photosynthesis","TO:0000249 - leaf senescence, TO:0002715 - chloroplast development trait, TO:0000432 - temperature response trait, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000605 - hydrogen peroxide content, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os03g0131900","LOC_Os03g03990.1",{"$nulls":7},"_","OsUGlcAE5, UGlcAE5, OsSTA172","_","UDP-glucuronic acid 4-epimerase 5",6," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005802 - trans-Golgi network, GO:0050662 - coenzyme binding, GO:0044237 - cellular metabolic process, GO:0005975 - carbohydrate metabolic process, GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives, GO:0005768 - endosome",null,"PO:0009066 - anther ","Os06g0187200","LOC_Os06g08810.1",{"$nulls":6},"PLS1","OsVHA-A, VHAA1, VHA-A1, OsVHA-A1, OsPLS1, OsPSL1/VHA-A1","PREMATURE LEAF SENESCENCE 1","vacuolar H+-ATPase subunit A, vacuolar-type H+-ATPase subunit A1, premature leaf senescence 1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005618 - cell wall, GO:0009734 - auxin mediated signaling pathway, GO:0007030 - Golgi organization, GO:0009555 - pollen development, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0033180 - proton-transporting V-type ATPase, V1 domain, GO:0009737 - response to abscisic acid stimulus, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010148 - transpiration, GO:0010150 - leaf senescence, GO:0010162 - seed dormancy, GO:0009941 - chloroplast envelope, GO:0046961 - proton-transporting ATPase activity, rotational mechanism, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0000325 - plant-type vacuole, GO:0005886 - plasma membrane, GO:0005774 - vacuolar membrane, GO:0005524 - ATP binding","TO:0000063 - mimic response, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000455 - seed set percent, TO:0000128 - harvest index, TO:0000592 - 1000-dehulled grain weight, TO:0000598 - protein content, TO:0000333 - sugar content, TO:0001027 - net photosynthetic rate, TO:0000040 - panicle length, TO:0000253 - seed dormancy, TO:0000249 - leaf senescence, TO:0000371 - yield trait, TO:0000495 - chlorophyll content, TO:0000615 - abscisic acid sensitivity, TO:0001018 - transpiration rate","PO:0001054 - 4 leaf senescence stage , PO:0025374 - seed dormant stage , PO:0020025 - micropyle ","Os06g0662000 ","LOC_Os06g45120.2, LOC_Os06g45120.1",{"$nulls":6},"LOX-L2","OsLOX-L2, LOX1.1, LOX L-2, LOX-2, OsLOX2, LOX2","LIPOXYGENASE L2","Lipoxygenase 2, Lipoxygenase L-2",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0009816 - defense response to bacterium, incompatible interaction, GO:0031408 - oxylipin biosynthetic process, GO:0016165 - lipoxygenase activity, GO:0048364 - root development, GO:0005506 - iron ion binding, GO:0005737 - cytoplasm, GO:0055114 - oxidation reduction, GO:0051707 - response to other organism, GO:0009507 - chloroplast, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus",null,null,"Os03g0738600","LOC_Os03g52860.1","Os05g0460200","Os01g0178500","Os03g0386500",2.2067926,0,null,"_","OsMPH1, MPH1, OsMYB45, MYB45, DLN171, OsDLN171, OsMYB-R1, MYB-R1","_","MYB-like gene of Plant Height 1, transcription factor OsMYB45, MYB protein 45, DLN repressor 171, DLN motif protein 171",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009826 - unidimensional cell growth, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0046686 - response to cadmium ion, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0006032 - panicle size, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000145 - internode length","PO:0025034 - leaf , PO:0020141 - stem node , PO:0009000 - pulvinus , PO:0020121 - lateral root , PO:0009029 - stamen ","Os06g0670300","LOC_Os06g45890.1"]
[{"$nulls":24},"Os01g0622300","Os03g0843100","Os03g0843100",-0.99046105,-1.0404965,null,"Os09g0450300",3.7144883,"Os10g0419400",-1.2983583,{"$nulls":29},"RLS2","OsEXO70A1, OsExo70A1, EXO70A1, OrysaA1_Exo70","RAPID LEAF SENESCENCE 2","rapid leaf senescence2, rapid leaf senescence 2, exocyst subunit EXO70 family protein A1",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm","GO:0000145 - exocyst, GO:0016049 - cell growth, GO:0016020 - membrane, GO:0009531 - secondary cell wall, GO:0006887 - exocytosis, GO:0005634 - nucleus, GO:0001944 - vasculature development","TO:0000207 - plant height, TO:0000470 - vascular tissue related trait, TO:0000652 - leaf necrosis, TO:0000145 - internode length","PO:0000034 - vascular system ","Os04g0685600 ","LOC_Os04g58880.1",{"$nulls":7},"NAC50","ONAC050, ONAC50","NAC DOMAIN-CONTAINING PROTEIN 50","NAC domain-containing protein 050, NAC domain-containing protein 50",2," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0003677 - DNA binding","TO:0002718 - awn anatomy and morphology trait, TO:0000072 - awn length, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os02g0594800","LOC_Os02g38130.1",{"$nulls":6},"SMG2","YDA1, OsMKKK10, MKKK10, SMG2/OsMKKK10, OsSMG2, OsMAPKKK10, MAPKKK10","SMALL GRAIN 2","YODA 1, OsYODA-2, YODA-2, MAPK kinase kinase 10, small grain 2",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042127 - regulation of cell proliferation, GO:0010103 - stomatal complex morphogenesis, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009793 - embryonic development ending in seed dormancy, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0080036 - regulation of cytokinin mediated signaling","TO:0002660 - cytokinin content, TO:0000590 - grain weight, TO:0002677 - brassinosteroid sensitivity, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os04g0559800 ","LOC_Os04g47240.3, LOC_Os04g47240.2, LOC_Os04g47240.1",{"$nulls":6},"R9-LOX1","Osr9-LOX1, OsLOX3, LOX3","R9-LIPOXYGENASE 1","9-lipoxygenase 1, lipoxygenase 3",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0010311 - lateral root formation, GO:0034440 - lipid oxidation, GO:0005506 - iron ion binding, GO:0031408 - oxylipin biosynthetic process, GO:0009409 - response to cold, GO:0009507 - chloroplast, GO:0016165 - lipoxygenase activity","TO:0000424 - brown planthopper resistance, TO:0002668 - jasmonic acid content, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000164 - stress trait, TO:0000476 - growth hormone content, TO:0000401 - plant growth hormone sensitivity",null,"Os03g0699700","LOC_Os03g49260.1, LOC_Os03g49260.2","Os03g0673800","Os07g0108400","Os05g0563400",2.2042835,0,null,"GWD1","OsGWD1","ALPHA-GLUCAN, WATER DIKINASE 1","\\alpha-glucan, water dikinase 1\\\", \\\"Glucan, Water-Dikinase 1\\\"\"",6," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010030 - positive regulation of seed germination, GO:0005524 - ATP binding, GO:0016301 - kinase activity, GO:0005983 - starch catabolic process","TO:0000379 - cool paste viscosity, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000412 - setback viscosity, TO:0000374 - breakdown viscosity, TO:0002661 - seed maturation, TO:0000408 - hot paste viscosity, TO:0000409 - peak viscosity, TO:0000734 - grain length, TO:0000696 - starch content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000266 - chalky endosperm, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000371 - yield trait, TO:0000462 - gelatinization temperature, TO:0000449 - grain yield per plant","PO:0007057 - 0 seed germination stage , PO:0025034 - leaf ","Os06g0498400 ","LOC_Os06g30310.1"]
[{"$nulls":24},"Os12g0572000","Os10g0377400","Os10g0377400",-1.4542078,-1.4349331,null,"Os02g0617300",3.7031517,"Os06g0251100",-1.2957335,{"$nulls":29},"TET1","OsTET1","TETRASPANIN 1","tetraspanin 1",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006995 - cellular response to nitrogen starvation, GO:0005886 - plasma membrane, GO:0009408 - response to heat, GO:0010438 - cellular response to sulfur starvation, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000259 - heat tolerance, TO:0000249 - leaf senescence","PO:0009051 - spikelet , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os01g0977100","LOC_Os01g74570.1",{"$nulls":7},"NAC136","ONAC136, OsSTA279","NAC DOMAIN-CONTAINING PROTEIN 136","NAC domain-containing protein 136",12," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent",null,"PO:0009066 - anther ","Os12g0415000","LOC_Os12g22630.1",{"$nulls":6},"GPA8","v-ATP-E, Osv-ATP-E, OsVHA-E1, VHA-E1, OsGPA8","GLUTELIN PRECURSOR ACCUMULATION 8","vacuolar ATP synthase subunit E, vacuolar H+-ATPase subunit E isoform 1, glutelin precursor accumulation8",1," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Storage substances,  Character as QTL - Plant growth activity","GO:0031982 - vesicle, GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain, GO:0007030 - Golgi organization, GO:0009705 - plant-type vacuole membrane, GO:0006885 - regulation of pH, GO:0005802 - trans-Golgi network, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0006892 - post-Golgi vesicle-mediated transport, GO:0009960 - endosperm development, GO:0015031 - protein transport, GO:0033363 - secretory granule organization, GO:0051453 - regulation of intracellular pH, GO:0032527 - protein exit from endoplasmic reticulum, GO:0046961 - proton-transporting ATPase activity, rotational mechanism","TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000063 - mimic response, TO:0000346 - tiller number, TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content, TO:0000592 - 1000-dehulled grain weight","PO:0009089 - endosperm , PO:0009051 - spikelet , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0007633 - endosperm development stage ","Os01g0659200","LOC_Os01g46980.1",{"$nulls":6},"YL1","MTC, OsMTC, YGL8, OsYGL8, OsCRD1, CRD1, OsCRD, CRD, YL-1, PNZIP, OsPNZIP","YELLOW-LEAF 1","Mg-Proto IX monomethylester cyclase, yellow-green leaf 8, Copper Response Defect 1, Yellow-Leaf 1, PHARBITIS NIL LEUCINE ZIPPER",1," Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0005506 - iron ion binding, GO:0031408 - oxylipin biosynthetic process, GO:0006364 - rRNA processing, GO:0009534 - chloroplast thylakoid, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009668 - plastid membrane organization, GO:0009941 - chloroplast envelope, GO:0019216 - regulation of lipid metabolic process, GO:0048529 - magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, GO:0009416 - response to light stimulus, GO:0019344 - cysteine biosynthetic process, GO:0010207 - photosystem II assembly, GO:0015979 - photosynthesis, GO:0009658 - chloroplast organization, GO:0006636 - unsaturated fatty acid biosynthetic process, GO:0010027 - thylakoid membrane organization, GO:0003677 - DNA binding, GO:0015995 - chlorophyll biosynthetic process, GO:0050832 - defense response to fungus, GO:0009507 - chloroplast","TO:0000316 - photosynthetic ability, TO:0000255 - sheath blight disease resistance, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000298 - chlorophyll ratio","PO:0009049 - inflorescence , PO:0009047 - stem , PO:0025034 - leaf ","Os01g0279100","LOC_Os01g17170.1, LOC_Os01g17170.2","Os03g0175800","Os01g0831200","Os02g0178800",2.200278,0,null,"WTG1","OTUB1, OsOTUB1, OsOTUB1.1, OsOTUB1.2, qNPT1, OsWTG1","WIDE AND THICK GRAIN 1","new plant type 1, OTU domain-containing ubiquitin aldehyde-binding protein 1, wide and thick grain 1, otubain 1",8," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004843 - ubiquitin-specific protease activity, GO:0019784 - NEDD8-specific protease activity, GO:0005634 - nucleus, GO:0042127 - regulation of cell proliferation, GO:0071108 - protein K48-linked deubiquitination, GO:0043130 - ubiquitin binding","TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000382 - 1000-seed weight, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000397 - grain size, TO:0002730 - grain shape, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000051 - stem strength, TO:0000346 - tiller number","PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009010 - seed , PO:0009015 - portion of vascular tissue , PO:0020123 - root cap , PO:0020149 - quiescent center , PO:0006079 - shoot meristem ","Os08g0537800","LOC_Os08g42540.1, LOC_Os08g42540.2"]
[{"$nulls":24},"Os02g0817800","Os05g0513800","Os05g0513800",4.915007,3.4570682,null,"Os02g0802200",3.701944,"Os01g0293200",-1.2943252,{"$nulls":29},"TET9","OsTET9","TETRASPANIN 9","tetraspanin 9",6," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0016021 - integral to membrane, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0009046 - flower , PO:0009051 - spikelet , PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os06g0572400","LOC_Os06g37510.1",{"$nulls":7},"NAC139","ONAC139, OsNAM","NAC DOMAIN-CONTAINING PROTEIN 139","NAC domain-containing protein 139, no apical meristem",12," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0010150 - leaf senescence, GO:0010089 - xylem development, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000625 - spikelet density, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0006001 - salt tolerance",null,"Os12g0477400","LOC_Os12g29330.1",{"$nulls":6},"SET1","OsSET1, SDG721, OsSDG721","SET PROTEIN 1","SET protein 1, SET DOMAIN GROUP 721 protein",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005634 - nucleus, GO:0010446 - response to alkalinity, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0051568 - histone H3-K4 methylation, GO:0008168 - methyltransferase activity, GO:0008270 - zinc ion binding, GO:0009294 - DNA mediated transformation","TO:0000206 - leaf angle, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0020004 - shoot sodium content, TO:0000525 - sodium to potassium content ratio, TO:0020003 - shoot potassium content, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000481 - alkali sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000397 - grain size","PO:0009047 - stem , PO:0009005 - root , PO:0009039 - glume , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0218800","LOC_Os01g11952.1",{"$nulls":6},"GM9","Gm9, Gm9(t)","GALL MIDGE RESISTANCE 9","Gall midge resistance-9",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os12g0572000","Os01g0718300","Os11g0116300",2.1951735,0,null,"PSE1","OsPSE1, OsPLL1, PLL1","PREMATURE SENESCENCE 1","premature senescence 1, premature senescence1, Pectate lyase-like 1",1," Biochemical character,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0030570 - pectate lyase activity, GO:0045490 - pectin catabolic process, GO:0009845 - seed germination, GO:0046872 - metal ion binding","TO:0000180 - spikelet fertility, TO:0000592 - 1000-dehulled grain weight, TO:0001018 - transpiration rate, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000397 - grain size","PO:0009073 - stigma , PO:0007057 - 0 seed germination stage ","Os01g0546800","LOC_Os01g36620.1"]
[{"$nulls":24},"Os10g0437700","Os06g0622800","Os06g0622800",-1.4798284,-1.1607436,null,"Os10g0163040",3.7016354,"Os05g0552300",-1.2935623,{"$nulls":29},"TET10","OsTET10","TETRASPANIN 10","tetraspanin 10",6," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence, GO:0005886 - plasma membrane","TO:0002657 - oxidative stress, TO:0000249 - leaf senescence","PO:0009051 - spikelet , PO:0001054 - 4 leaf senescence stage , PO:0009046 - flower ","Os06g0653100","LOC_Os06g44310.1",{"$nulls":7},"_","RgMADS1","_",null,null," Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent","TO:0006022 - floral organ development trait",{"$nulls":9},"GPX1","OsGpx1, GPX1, OsGPx01, OsGPX1","GLUTATHIONE PEROXIDASE 1","glutathione peroxidase 1",4," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004602 - glutathione peroxidase activity, GO:0005739 - mitochondrion, GO:0010332 - response to gamma radiation, GO:0045454 - cell redox homeostasis, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0010109 - regulation of photosynthesis, GO:0048364 - root development","TO:0000445 - seed number, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000656 - root development trait, TO:0000429 - salt sensitivity, TO:0000456 - spikelet number","PO:0007520 - root development stage ","Os04g0556300","LOC_Os04g46960.4, LOC_Os04g46960.3, LOC_Os04g46960.2, LOC_Os04g46960.1",{"$nulls":6},"GM10","Gm10, Gm10(t)","GALL MIDGE RESISTANCE 10","Gall midge resistance-10",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os10g0554200","Os01g0667700","Os06g0234200",2.1765966,0,null,"PTR9","OsPTR9, OsNPF8.20, NPF8.20","PROTEIN TRANSPORTER 9","NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 8.20",6," Biochemical character,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0048527 - lateral root development, GO:0009416 - response to light stimulus, GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0060359 - response to ammonium ion","TO:0000447 - filled grain number, TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0001027 - net photosynthetic rate, TO:0000075 - light sensitivity, TO:0002673 - amino acid content, TO:0000325 - soluble protein content, TO:0000457 - total biomass yield, TO:0000278 - root to shoot ratio, TO:0000656 - root development trait, TO:0000227 - root length, TO:0000279 - root weight, TO:0000440 - grain number per plant, TO:0000152 - panicle number","PO:0007520 - root development stage ","Os06g0706400","LOC_Os06g49250.5, LOC_Os06g49250.4, LOC_Os06g49250.3, LOC_Os06g49250.2, LOC_Os06g49250.1"]
[{"$nulls":24},"Os03g0129300","Os11g0153400","Os11g0153400",1.4835459,2.5257094,null,"Os12g0283300",3.6976802,"Os01g0390400",-1.2926439,{"$nulls":29},"TET11","OsTET11","TETRASPANIN 11","tetraspanin 11",8," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0010150 - leaf senescence, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0009741 - response to brassinosteroid stimulus","TO:0002677 - brassinosteroid sensitivity, TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os08g0260600","LOC_Os08g16050.1",{"$nulls":7},"_","OsFbox006, OsFbox6, Os_F0083, OsFBX5, OsSTA12","_","F-box protein 6",1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0281000","LOC_Os01g17390.1",{"$nulls":6},"_","OsMED15_1, MED15_1, OsKIX_3, KIX_3","_","KIX domain protein 3, Mediator 15_1",4," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0048316 - seed development, GO:0003712 - transcription cofactor activity, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os04g0127800","LOC_Os04g03860.1",{"$nulls":6},"BPH21","Bph21(t)","BROWN PLANTHOPPER RESISTANCE 21 ",null,12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os03g0337600","Os04g0671900","Os08g0439000",2.1532109,0,null,"_","GL4, GL4/ObSH4, SH4","_","grain length on chromosome 4, GRAIN LENGTH 4",4," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000391 - seed size"]
[{"$nulls":24},"Os01g0696000","Os05g0567300","Os05g0567300",1.3482547,1.4644338,null,"Os08g0462800",3.696861,"Os01g0757500",-1.2921511,{"$nulls":29},"TET14","OsTET14","TETRASPANIN 14","tetraspanin 14",10," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0005886 - plasma membrane, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0010150 - leaf senescence, GO:0016021 - integral to membrane","TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000249 - leaf senescence, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage ","Os10g0503600","LOC_Os10g35980.1",{"$nulls":7},"_","OsFbox023, OsFbox23, Os_F0211, OsSTA20","_","F-box protein 23",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016829 - lyase activity",null,"PO:0009066 - anther ","Os01g0595900","LOC_Os01g41270.1",{"$nulls":6},"TGW2","OsFWL1, FWL1, OsTGW2, OsCNR1, CNR1, OsPCR3, PCR3","THOUSAND GRAIN WEIGHT 2","FW2.2-like 1, FRUIT-WEIGHT2.2-LIKE 1, CELL NUMBER REGULATOR 1, plant cadmium resistance protein 3",2," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0016049 - cell growth, GO:0008283 - cell proliferation","TO:0000734 - grain length, TO:0000590 - grain weight, TO:0000605 - hydrogen peroxide content, TO:0000399 - grain thickness",null,"Os02g0763000","LOC_Os02g52550.1",{"$nulls":6},"BPH20","Bph20(t)","BROWN PLANTHOPPER RESISTANCE 20  ",null,4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os06g0693700","Os03g0640800","Os03g0680800",2.1520936,0,null,"ALDH2B1  ","OsALDH2B1, OsALDH2b, ALDH2b","ALDEHYDE DEHYDROGENASE 2B1","Aldehyde dehydrogenase 2B1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005739 - mitochondrion, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009742 - brassinosteroid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0016491 - oxidoreductase activity, GO:0004029 - aldehyde dehydrogenase (NAD) activity, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0009556 - microsporogenesis, GO:0048653 - anther development, GO:0051321 - meiotic cell cycle, GO:0048608 - reproductive structure development, GO:0009555 - pollen development","TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002668 - jasmonic acid content, TO:0000476 - growth hormone content, TO:0000040 - panicle length, TO:0002688 - leaf lamina joint bending, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000437 - male sterility, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os06g0270900","LOC_Os06g15990.1"]
[{"$nulls":24},"Os06g0203200","Os12g0533400","Os12g0533400",1.8378496,1.8788124,null,"Os04g0474500",3.6957576,"Os05g0176500",-1.2910043,{"$nulls":29},"SLAC1","OsSLAC1, OsSLAH1, SLAH1","SLOW ANION CHANNEL 1","S-type anion channel 1, slow anion channel 1, slow-type anion channel 1, Slow-Type Anion Channel-Associated Homolog 1",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006873 - cellular ion homeostasis, GO:0010118 - stomatal movement, GO:0010193 - response to ozone, GO:0010374 - stomatal complex development, GO:0015711 - organic anion transport, GO:0016021 - integral to membrane, GO:0050891 - multicellular organismal water homeostasis, GO:0009651 - response to salt stress, GO:0010233 - phloem transport, GO:0006814 - sodium ion transport, GO:0006863 - purine transport, GO:0010109 - regulation of photosynthesis, GO:0008308 - voltage-gated anion channel activity, GO:0006821 - chloride transport, GO:0009270 - response to humidity, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0010037 - response to carbon dioxide, GO:0010119 - regulation of stomatal movement, GO:0005886 - plasma membrane","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000522 - stomatal conductance, TO:0000131 - leaf water potential","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0000293 - guard cell ","Os04g0574700","LOC_Os04g48530.1",{"$nulls":7},"FBOX33","OsFbox033, OsFbox33, Fbox33, Os_F0114, OsFBK1, FBK1","F-BOX PROTEIN 33","F-box protein 33, F-box Kelch 1",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0048437 - floral organ development, GO:0009733 - response to auxin stimulus, GO:0019005 - SCF ubiquitin ligase complex, GO:0048364 - root development, GO:0048653 - anther development, GO:0052386 - cell wall thickening","TO:0000269 - 100-seed weight, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000531 - anther length, TO:0000625 - spikelet density, TO:0000564 - spikelet width, TO:0006013 - carpel number, TO:0000225 - stamen number, TO:0006029 - glume number, TO:0000734 - grain length, TO:0000391 - seed size, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002600 - flower organ size, TO:0006038 - floral organ number, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000622 - flower development trait, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance","PO:0000040 - adventitious root nodule , PO:0009013 - portion of meristem tissue , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0025545 - anther wall tapetum cell , PO:0009010 - seed , PO:0009046 - flower , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage , PO:0025585 - floral organ formation stage , PO:0007520 - root development stage , PO:0001004 - anther development stage ","Os01g0659900","LOC_Os01g47050.1",{"$nulls":6},"FWL3","OsFWL3","FRUIT-WEIGHT2.2-LIKE 3","FW2.2-like 3",2," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane","TO:0000590 - grain weight, TO:0000080 - micronutrient sensitivity, TO:0000734 - grain length",null,"Os02g0580000","LOC_Os02g36950.1, LOC_Os02g36950.2",{"$nulls":6},"BPH13","Bph13(t)","BROWN PLANT HOPPER RESISTANT 13",null,3," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os01g0631700","Os02g0661100","Os05g0548300",2.150728,0,null,"NTMC2T4.1","OsNTMC2T4.1, OsSYT-5, SYT-5, SYT5","N-TERMINAL-TM-C2 DOMAIN PROTEIN 4.1","N-terminal-TM-C2 domain protein 4.1, N-terminal trans- membrane and C2 domain protein 4.1, NTMC2 type 4.1 protein, NTMC2 family gene 4.1, silencing of the synaptotagmin-5",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0006950 - response to stress, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005513 - detection of calcium ion, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008289 - lipid binding, GO:0005783 - endoplasmic reticulum","TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0000043 - root anatomy and morphology trait, TO:0002637 - leaf size, TO:0000566 - stomatal frequency, TO:0000540 - leaf area, TO:0000152 - panicle number, TO:0000396 - grain yield, TO:0001018 - transpiration rate, TO:0000136 - relative water content, TO:0000084 - root number, TO:0000227 - root length, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000421 - pollen fertility, TO:0002667 - abscisic acid content, TO:0000522 - stomatal conductance, TO:0001015 - photosynthetic rate, TO:0001017 - water use efficiency, TO:0000276 - drought tolerance, TO:0000181 - seed weight, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000455 - seed set percent, TO:0000447 - filled grain number, TO:0000040 - panicle length",null,"Os07g0409100","LOC_Os07g22640.4, LOC_Os07g22640.1, LOC_Os07g22640.2, LOC_Os07g22640.3"]
[{"$nulls":24},"Os01g0544200","Os03g0781000","Os03g0781000",2.4817436,1.9863502,null,"Os01g0291500",3.6914914,"Os03g0819900",-1.2907563,{"$nulls":29},"_","STOMAGEN, OsEPFL9, EPFL9","_","Epidermal Patterning Factor like-9",1," Vegetative organ - Leaf","GO:0008544 - epidermis development, GO:0007267 - cell-cell signaling, GO:0016556 - mRNA modification, GO:0010375 - stomatal complex patterning, GO:0010052 - guard cell differentiation, GO:0010374 - stomatal complex development","TO:0000566 - stomatal frequency",null,"Os01g0914400 ","LOC_Os01g68598.2, LOC_Os01g68598.1",{"$nulls":7},"_","OsFbox095, OsFbox95, Os_F0274, OsSTA64","_","F-box protein 95",2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0543200","LOC_Os02g33840.1",{"$nulls":6},"PCR1","OsFWL5, FWL5, OsPcr1, OsPCR1, OsFWL5/OsPCR1","PLANT CADMIUM RESISTANCE 1","FW2.2-like 5, fruit-weight 2.2-like 5, Plant cadmium resistance 1",10," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048366 - leaf development, GO:0005886 - plasma membrane, GO:0055065 - metal ion homeostasis, GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0015691 - cadmium ion transport, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010942 - positive regulation of cell death, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin","TO:0000203 - bacterial leaf streak disease resistance, TO:0000080 - micronutrient sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000655 - leaf development trait, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000351 - zinc sensitivity",null,"Os10g0112100","LOC_Os10g02300.3, LOC_Os10g02300.2, LOC_Os10g02300.1",{"$nulls":6},"BPH22","Bph22(t)","BROWN PLANTHOPPER RESISTANCE 22",null,6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os10g0533500","Os11g0484500","Os02g0743400",2.1346276,0,null,"PAAB1-1","OsALMT7, ALMT7","PANICLE APICAL ABORTION 1-1","Aluminum-activated malate transporter 7, panicle apical abortion1-1",2," Biochemical character,  Reproductive organ - panicle,  Character as QTL - Yield and productivity","GO:0009705 - plant-type vacuole membrane, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane, GO:0015743 - malate transport, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0012501 - programmed cell death, GO:0016021 - integral to membrane, GO:0015140 - malate transmembrane transporter activity","TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000447 - filled grain number, TO:0000621 - inflorescence development trait, TO:0000590 - grain weight, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0006032 - panicle size","PO:0001083 - inflorescence development stage , PO:0009005 - root ","Os02g0673100   ","LOC_Os02g45160.1"]
[{"$nulls":24},"Os04g0474500","Os01g0102400","Os01g0102400",-1.5371138,0,null,"Os02g0259600",3.689787,"Os05g0494200",-1.2893785,{"$nulls":29},"CZOGT1","OscZOGT1, cZOGT1","CIS-ZEATIN O-GLUCOSYLTRANSFERASE 1","cis-zeatin O-glucosyltransferase 1, cZ-O-glucosyltransferase 1",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root","GO:0010150 - leaf senescence, GO:0048527 - lateral root development, GO:0048367 - shoot development, GO:0048364 - root development, GO:0033399 - cis-zeatin metabolic process, GO:0016758 - transferase activity, transferring hexosyl groups","TO:0000656 - root development trait, TO:0000495 - chlorophyll content, TO:0002685 - crown root number, TO:0000249 - leaf senescence, TO:0000654 - shoot development trait, TO:0000077 - shoot anatomy and morphology trait","PO:0007112 - 1 main shoot growth stage , PO:0007520 - root development stage ","Os04g0556500","LOC_Os04g46980.1",{"$nulls":7},"AP38","OsAP38","ASPARTIC PROTEASE 38","aspartic protease 38",4," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004190 - aspartic-type endopeptidase activity, GO:0006508 - proteolysis, GO:0048653 - anther development, GO:0030163 - protein catabolic process",null,"PO:0001004 - anther development stage , PO:0009066 - anther ","Os04g0596200 ","LOC_Os04g50850.2, LOC_Os04g50850.1",{"$nulls":6},"PHS9","OsGRX3, GRX3","PRE-HARVEST SPROUTING 9","glutaredoxin 3, Pre-harvest sprouting 9",1," Biochemical character,  Seed - Morphological traits - Embryo,  Seed - Physiological traits - Dormancy","GO:0005634 - nucleus, GO:0009845 - seed germination, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0046872 - metal ion binding, GO:0045454 - cell redox homeostasis, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009055 - electron carrier activity, GO:0048623 - seed germination on parent plant, GO:0042542 - response to hydrogen peroxide, GO:0009790 - embryonic development, GO:0005737 - cytoplasm","TO:0000615 - abscisic acid sensitivity, TO:0000620 - embryo development trait","PO:0009009 - plant embryo , PO:0007631 - plant embryo stage ","Os01g0241400","LOC_Os01g13950.1",{"$nulls":6},"CSA","csa, OsCSA","CARBON STARVED ANTHER",null,1," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0003700 - transcription factor activity, GO:0008643 - carbohydrate transport, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling","TO:0002677 - brassinosteroid sensitivity, TO:0000276 - drought tolerance",null,"Os01g0274800","LOC_Os01g16810.1","Os08g0425200","Os06g0612800","Os09g0298100",2.1312063,0,null,"NOG1","OsNOG1","NUMBER OF GRAINS 1",null,1," Biochemical character,  Character as QTL - Yield and productivity","GO:0031998 - regulation of fatty acid beta-oxidation, GO:0009753 - response to jasmonic acid stimulus, GO:0080140 - regulation of jasmonic acid metabolic process, GO:0003860 - 3-hydroxyisobutyryl-CoA hydrolase activity, GO:0004300 - enoyl-CoA hydratase activity","TO:0002668 - jasmonic acid content, TO:0000447 - filled grain number, TO:0000449 - grain yield per plant, TO:0000396 - grain yield, TO:0000172 - jasmonic acid sensitivity","PO:0025034 - leaf ","Os01g0752200","LOC_Os01g54860.1"]
[{"$nulls":24},"Os10g0370500","Os01g0127450","Os01g0127450",1.9943953,0,null,"Os04g0529300",3.6872241,"Os06g0567000",-1.2887367,{"$nulls":29},"CZOGT2","OscZOGT2, cZOGT2","CIS-ZEATIN O-GLUCOSYLTRANSFERASE 2","cis-zeatin O-glucosyltransferase 2, cZ-O-glucosyltransferase 2",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root","GO:0048527 - lateral root development, GO:0048367 - shoot development, GO:0048364 - root development, GO:0033399 - cis-zeatin metabolic process, GO:0016758 - transferase activity, transferring hexosyl groups, GO:0010150 - leaf senescence","TO:0000656 - root development trait, TO:0002685 - crown root number, TO:0000495 - chlorophyll content, TO:0000249 - leaf senescence, TO:0000077 - shoot anatomy and morphology trait, TO:0000654 - shoot development trait","PO:0007520 - root development stage , PO:0007112 - 1 main shoot growth stage ","Os04g0556600","LOC_Os04g46990.1",{"$nulls":7},"BSR2","OsBSR2, CYP78A15, OsCYP78A15","BROAD-SPECTRUM RESISTANCE 2","BROAD-SPECTRUM RESISTANCE2, Cytochrome P450 78A15",8," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0020037 - heme binding, GO:0080112 - seed growth, GO:0050832 - defense response to fungus","TO:0000650 - lemma length, TO:0000531 - anther length, TO:0020033 - glume length, TO:0002610 - pistil length, TO:0000734 - grain length, TO:0000420 - fertility related trait, TO:0000360 - leaf elongation rate, TO:0000146 - seed length, TO:0002600 - flower organ size, TO:0000255 - sheath blight disease resistance, TO:0000391 - seed size, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009037 - lemma , PO:0009049 - inflorescence , PO:0009005 - root , PO:0025034 - leaf ","Os08g0547300","LOC_Os08g43390.1",{"$nulls":6},"GRX6","OsGRX6, OsGrx_I1, Grx_I1","GLUTAREDOXIN 6","glutaredoxin 6",1," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045487 - gibberellin catabolic process, GO:0048878 - chemical homeostasis, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009055 - electron carrier activity, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009686 - gibberellin biosynthetic process, GO:0009691 - cytokinin biosynthetic process, GO:0010476 - gibberellin-mediated signaling, GO:0015035 - protein disulfide oxidoreductase activity, GO:0015996 - chlorophyll catabolic process, GO:0045454 - cell redox homeostasis, GO:0046872 - metal ion binding, GO:0009736 - cytokinin mediated signaling, GO:0009826 - unidimensional cell growth","TO:0000445 - seed number, TO:0000402 - grain width, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000432 - temperature response trait, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002660 - cytokinin content, TO:0002675 - gibberellic acid content",null,"Os01g0667900","LOC_Os01g47760.1",{"$nulls":6},"GM11","Gm11t, Gm11(t), Gm11","GALL MIDGE RESISTANCE 11",null,12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000423 - gall midge resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",null,null,"Os01g0850700","Os04g0132500","Os08g0545700",2.1197512,0,null,"SEC3A","OsSEC3A","EXOCYST SUBUNIT SEC3A","exocyst subunit SEC3A",3," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0060548 - negative regulation of cell death, GO:0005886 - plasma membrane, GO:0006893 - Golgi to plasma membrane transport, GO:0050832 - defense response to fungus, GO:0010730 - negative regulation of hydrogen peroxide biosynthetic process, GO:0006887 - exocytosis, GO:0051601 - exocyst localization, GO:0000145 - exocyst, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0017049 - GTP-Rho binding","TO:0000592 - 1000-dehulled grain weight, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0000180 - spikelet fertility, TO:0000063 - mimic response, TO:0000040 - panicle length, TO:0000346 - tiller number",null,"Os03g0625700","LOC_Os03g42750.1, LOC_Os03g42750.2"]
[{"$nulls":24},"Os01g0191200","Os01g0177100","Os01g0177100",2.000315,0,null,"Os05g0587600",3.6845493,"Os10g0407200",-1.2883378,{"$nulls":29},"SLC1","OsSLC1, GA20OX7, OsGA20ox7, ga20ox7, 2-ODD4, Os2-ODD4, 2ODD4, Os2ODD4","SLENDER AND CRINKLY LEAF 1","rice GA 20-oxidase7, GA 20-oxidase 7, gibberellin C-20 oxidase 7, Gibberellin-20 oxidase 7, 2-oxoglutarate-dependent dioxygenase 4",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed","GO:0048366 - leaf development, GO:0048316 - seed development, GO:0016491 - oxidoreductase activity, GO:0009686 - gibberellin biosynthetic process, GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0048364 - root development, GO:0009697 - salicylic acid biosynthetic process","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000241 - leaf number, TO:0000207 - plant height, TO:0000227 - root length, TO:0002675 - gibberellic acid content","PO:0001031 - 4 root elongation stage , PO:0001170 - seed development stage , PO:0025527 - shoot system development stage ","Os08g0560000 ","LOC_Os08g44590.1",{"$nulls":7},"BOP2","OsNH5, NH5, OsBOP2","OsBLADE-ON-PETIOLE 2","NPR1 homologue 5, OsBLADE-ON-PETIOLE2",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0009790 - embryonic development, GO:0048366 - leaf development","TO:0000621 - inflorescence development trait, TO:0000492 - leaf shape","PO:0020104 - leaf sheath , PO:0000017 - vascular leaf primordium , PO:0020105 - ligule , PO:0020128 - leaf margin , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os11g0141900","LOC_Os11g04600.1",{"$nulls":6},"PP2C9","OsPP15, PP15, OsPP2C09, OsPP2C9","PROTEIN PHOSPHATASE 2C 9","protein phosphatase 15, protein phosphatase 2C09, protein phosphatase 2C9, protein phosphatase 2C 9",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0006470 - protein amino acid dephosphorylation, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0009737 - response to abscisic acid stimulus, GO:0080134 - regulation of response to stress, GO:0046872 - metal ion binding, GO:0016021 - integral to membrane, GO:0010119 - regulation of stomatal movement, GO:0030307 - positive regulation of cell growth, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0048831 - regulation of shoot development, GO:0010030 - positive regulation of seed germination, GO:0010374 - stomatal complex development, GO:0050891 - multicellular organismal water homeostasis, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0004722 - protein serine/threonine phosphatase activity","TO:0000430 - germination rate, TO:0000566 - stomatal frequency, TO:0000207 - plant height, TO:0006036 - stem elongation, TO:0000656 - root development trait, TO:0000278 - root to shoot ratio, TO:0000227 - root length, TO:0000447 - filled grain number, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0007057 - 0 seed germination stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007089 - stem elongation stage , PO:0007520 - root development stage ","Os01g0846300","LOC_Os01g62760.1",{"$nulls":6},"RDD1","OsDof2, OsDof9, Dof9, OsDof-9, DLN64, OsDLN64, OsDof8, Dof8","RICE DOF DAILY FLUCTUATIONS 1","Dof zinc factor 9, Dof transcription factor 9, DLN repressor 64, DLN motif protein 64",2," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000303 - cold tolerance","PO:0009005 - root ","Os02g0673700","LOC_Os02g45200.4, LOC_Os02g45200.3, LOC_Os02g45200.2, LOC_Os02g45200.1","Os05g0110900","Os10g0548700","Os03g0351200",2.1073048,0,null,"GGC2","OsGGC2","_","G gamma subunit GGC2",8," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000397 - grain size, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000567 - tiller angle, TO:0000303 - cold tolerance, TO:0000455 - seed set percent, TO:0006001 - salt tolerance, TO:0000346 - tiller number",null,"Os08g0456600"]
[{"$nulls":24},"Os03g0439500","Os01g0646300","Os01g0646300",2.6251109,0,null,"Os04g0223300",3.6837552,"Os12g0104800",-1.286427,{"$nulls":29},"YLC1","OsV5A, V5A","YOUNG LEAF CHLOROSIS 1","Young Leaf Chlorosis 1, VIRESCENT 5A",9," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0042651 - thylakoid membrane, GO:0015979 - photosynthesis, GO:0015995 - chlorophyll biosynthetic process, GO:0009941 - chloroplast envelope, GO:0009409 - response to cold, GO:0016021 - integral to membrane, GO:0031969 - chloroplast membrane, GO:0048366 - leaf development","TO:0000293 - chlorophyll-a content, TO:0000303 - cold tolerance, TO:0000298 - chlorophyll ratio, TO:0000655 - leaf development trait, TO:0000496 - carotenoid content, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0002701 - lutein content, TO:0000316 - photosynthetic ability, TO:0000295 - chlorophyll-b content",null,"Os09g0380200","LOC_Os09g21250.1",{"$nulls":7},"BOP3","NH5, OsNH5, OsBOP3","BLADE-ON-PETIOLE 3","NPR1 homologue 5, OsBLADE-ON-PETIOLE3",12," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0009790 - embryonic development, GO:0048366 - leaf development, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway","TO:0000492 - leaf shape, TO:0000240 - sterile lemma length, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020105 - ligule , PO:0020128 - leaf margin , PO:0009051 - spikelet , PO:0000017 - vascular leaf primordium , PO:0020104 - leaf sheath ","Os12g0138500","LOC_Os12g04410.1",{"$nulls":6},"VQ4","OsVQ4","VQ-MOTIF PROTEIN 4","VQ motif-containing protein 4, valine-glutamine protein 4",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051091 - positive regulation of transcription factor activity","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0808900","LOC_Os01g59410.1",{"$nulls":6},"RDD2","OsDof23, Dof23, OsDof-23, OsDof1, OsCDF3, CDF3, OsDof24, Dof24","RICE DOF DAILY FLUCTUATIONS 2","AOBP-like protein gene, Rdd1-like gene, DNA binding of the One Finger 1, DNA binding with one finger protein 1, Dof protein 1, CYCLING DOF FACTOR 3, Dof zinc factor 23, Dof transcription factor 23",7," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009620 - response to fungus, GO:0009266 - response to temperature stimulus, GO:0007623 - circadian rhythm, GO:0008270 - zinc ion binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0010378 - temperature compensation of the circadian clock, GO:0009611 - response to wounding, GO:0003677 - DNA binding","TO:0000432 - temperature response trait, TO:0000074 - blast disease, TO:0000164 - stress trait",null,"Os07g0685000","LOC_Os07g48570.1","Os07g0556200","Os04g0423400","Os06g0143700",2.1045363,0,null,"PSL1","OsPGL13, PGL13, OsPSL1, OsPG1, PG1, LTN-212","PHOTO-SENSITIVE LEAF ROLLING 1","Polygalacturonases-Like 13, PG-like 13, leaf tip necrosis 212, Polygalacturonase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004650 - polygalacturonase activity, GO:0005576 - extracellular region, GO:0005975 - carbohydrate metabolic process, GO:0070265 - necrotic cell death, GO:0009414 - response to water deprivation, GO:0052386 - cell wall thickening, GO:0045490 - pectin catabolic process, GO:0009642 - response to light intensity, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000040 - panicle length, TO:0000605 - hydrogen peroxide content, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0000085 - leaf rolling, TO:0000276 - drought tolerance, TO:0000441 - humidity related trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0296200","LOC_Os01g19170.1"]
[{"$nulls":24},"Os09g0537700","Os01g0695100","Os01g0695100",-1.1512326,0,null,"Os03g0236200",3.6825602,"Os01g0721300",-1.2860575,{"$nulls":29},"AAP12A","OsAAP12A, OsAAP3, AAP3","AMINO ACID PERMEASE 12A","amino acid permease 12A, amino acid permease 3, amino acid/auxin permease 3",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Lesion mimic,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0010109 - regulation of photosynthesis, GO:0015809 - arginine transport, GO:0010941 - regulation of cell death, GO:0010150 - leaf senescence, GO:0015171 - amino acid transmembrane transporter activity","TO:0000152 - panicle number, TO:0002673 - amino acid content, TO:0000249 - leaf senescence, TO:0000063 - mimic response, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000227 - root length, TO:0000084 - root number, TO:0000329 - tillering ability, TO:0000396 - grain yield","PO:0001054 - 4 leaf senescence stage ","Os06g0556000","LOC_Os06g36180.1",{"$nulls":7},"GSA1","OsGSA1, UGT83A1, OsUGT83A1","GRAIN SIZE AND ABIOTIC STRESS TOLERANCE 1","Grain Size and Abiotic stress tolerance 1, UDP-glucosyltransferase 83A1",3," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008194 - UDP-glycosyltransferase activity, GO:0009698 - phenylpropanoid metabolic process, GO:0010229 - inflorescence development, GO:0010600 - regulation of auxin biosynthetic process, GO:0001558 - regulation of cell growth, GO:0042127 - regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0009809 - lignin biosynthetic process, GO:0009962 - regulation of flavonoid biosynthetic process","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000657 - spikelet anatomy and morphology trait, TO:0000290 - flavonoid content, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000259 - heat tolerance, TO:0002672 - auxin content","PO:0009051 - spikelet ","Os03g0757500","LOC_Os03g55040.1",{"$nulls":6},"VQ13","OsVQ13","VQ-MOTIF-CONTAINING PROTEIN 13","VQ motif-containing protein 13, valine-glutamine-motif-containing protein 13, valine-glutamine protein 13",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009867 - jasmonic acid mediated signaling pathway, GO:0042742 - defense response to bacterium, GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0005634 - nucleus","TO:0000172 - jasmonic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000397 - grain size",null,"Os03g0676400","LOC_Os03g47280.1",{"$nulls":6},"RDD4","OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12, OsDof11, Dof11","RICE DOF DAILY FLUCTUATIONS 4","CYCLING DOF FACTOR 1, Dof zinc factor 12, Dof transcription factor 12",3," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0010378 - temperature compensation of the circadian clock, GO:0009266 - response to temperature stimulus, GO:0007623 - circadian rhythm, GO:0009414 - response to water deprivation, GO:0009646 - response to absence of light, GO:0006355 - regulation of transcription, DNA-dependent, GO:0008270 - zinc ion binding","TO:0000460 - light intensity sensitivity, TO:0000432 - temperature response trait, TO:0000276 - drought tolerance","PO:0025034 - leaf ","Os03g0169600","LOC_Os03g07360.1","Os01g0117200","Os02g0763000","Os08g0156600",2.1007314,0,null,"GS7",null,"GRAIN SHAPE 7","grain shape 7, GRAIN SHAPE ON CHROMOSOME 7",7," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0002730 - grain shape, TO:0000382 - 1000-seed weight, TO:0000734 - grain length"]
[{"$nulls":24},"Os03g0826500","Os01g0695900","Os01g0695900",-1.6632069,0,null,"Os05g0339300",3.6795466,"Os04g0671200",-1.2848374,{"$nulls":29},"S40-1 ","Dfu584, Duf584, OsS40-1","S40 PROTEIN 1","DUF584 domain-containing protein, S40 protein 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010150 - leaf senescence, GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009646 - response to absence of light, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0000466 - carbon content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009005 - root , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage ","Os05g0531100","LOC_Os05g45450.1",{"$nulls":7},"PRP3","OsPRP3","PROLINE-RICH PROTEIN 3","proline-rich protein 3",10," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009409 - response to cold, GO:0009908 - flower development, GO:0048444 - floral organ morphogenesis","TO:0000303 - cold tolerance, TO:0000622 - flower development trait","PO:0009046 - flower , PO:0007615 - flower development stage ","Os10g0148100","LOC_Os10g05750.1",{"$nulls":6},"HT","OsHT, OsLHT1, LHT1","HISTIDINE TRANSPORTER","Histidine Transporter, lysine and histidine transporter 1, lysine-histidine-like transporter 1, Lysine/Histidine transporter 1, Lysine-Histidine-type Transporter 1",8," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0009536 - plastid, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042886 - amide transport, GO:0015800 - acidic amino acid transport, GO:0010233 - phloem transport, GO:0048367 - shoot development, GO:0006865 - amino acid transport, GO:0005886 - plasma membrane, GO:0019740 - nitrogen utilization, GO:0043090 - amino acid import","TO:0000409 - peak viscosity, TO:0000207 - plant height, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000371 - yield trait, TO:0000576 - stem length, TO:0000346 - tiller number, TO:0000654 - shoot development trait, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0002673 - amino acid content, TO:0000598 - protein content, TO:0000455 - seed set percent, TO:0000138 - brown rice protein, TO:0000430 - germination rate, TO:0000653 - seed development trait, TO:0000196 - amylose content, TO:0000379 - cool paste viscosity, TO:0000621 - inflorescence development trait","PO:0006036 - root epidermis , PO:0025413 - primary leaf vein , PO:0020138 - leaf lamina vein , PO:0025261 - pericycle cell , PO:0005059 - root endodermis , PO:0005427 - sclerenchyma , PO:0005772 - exodermis , PO:0000048 - leaf lamina vascular system , PO:0020124 - root stele , PO:0000258 - root cortex , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0020104 - leaf sheath , PO:0025395 - floral organ , PO:0025066 - stalk , PO:0005020 - vascular bundle , PO:0009005 - root , PO:0009047 - stem , PO:0020103 - flag leaf , PO:0025034 - leaf ","Os08g0127100","LOC_Os08g03350.1",{"$nulls":6},"DOF4","OsDof4, OsDof8, Dof8, OsDof-8, DOF8, OsDof10, Dof10","DNA BINDING WITH ONE FINGER 4","Dof zinc factor 8, Dof transcription factor 8",2," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0006950 - response to stress, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000432 - temperature response trait",null,"Os02g0726300","LOC_Os02g49440.1","Os01g0127700","Os05g0402700","Os01g0290600",2.0990968,0,null,"PAY1",null,"PLANT ARCHITECTURE AND YIELD 1",null,8," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010229 - inflorescence development, GO:0009926 - auxin polar transport","TO:0000145 - internode length, TO:0000621 - inflorescence development trait, TO:0000152 - panicle number, TO:0000472 - vascular bundle number, TO:0000576 - stem length, TO:0000339 - stem thickness, TO:0006032 - panicle size, TO:0000567 - tiller angle, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0002672 - auxin content, TO:0000449 - grain yield per plant, TO:0000447 - filled grain number, TO:0000396 - grain yield","PO:0001083 - inflorescence development stage , PO:0020148 - shoot apical meristem , PO:0009051 - spikelet , PO:0000017 - vascular leaf primordium ","Os08g0407200","LOC_Os08g31470.1, LOC_Os08g31470.2, LOC_Os08g31470.3, LOC_Os08g31470.4"]
[{"$nulls":24},"Os10g0111700","Os01g0702700","Os01g0702700",3.6745605,0,null,"Os09g0361500",3.678552,"Os10g0492101",-1.2841135,{"$nulls":29},"RLCK176","OsRLCK176","RECEPTOR-LIKE CYTOPLASMIC KINASE 176","receptor-like cytoplasmic kinase 176",5," Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0002237 - response to molecule of bacterial origin, GO:0042742 - defense response to bacterium, GO:0043067 - regulation of programmed cell death, GO:0009611 - response to wounding, GO:0052033 - pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity, GO:0005524 - ATP binding, GO:0031347 - regulation of defense response, GO:0009742 - brassinosteroid mediated signaling, GO:0004674 - protein serine/threonine kinase activity, GO:0002238 - response to molecule of fungal origin, GO:0009741 - response to brassinosteroid stimulus","TO:0002677 - brassinosteroid sensitivity, TO:0000439 - fungal disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000315 - bacterial disease resistance, TO:0000206 - leaf angle",null,"Os05g0110900","LOC_Os05g02020.2, LOC_Os05g02020.1",{"$nulls":7},"SYL2","OsSYL2","STYLE LENGTH 2","style length 2",2," Reproductive organ - Spikelet, flower, glume, awn",{"$nulls":3},"Os02g0733900","LOC_Os02g50110.1",{"$nulls":6},"BIP120","OsBIP120, qCTS-9, TAF2, OsTAF2","BRASSINOSTEROID RECEPTOR KINASE-INTERACTING PROTEIN 120","brassinosteroid receptor kinase (BRI1)-interacting protein 120, BRI1-interacting protein 120, brassinosteroid receptor kinase-interacting protein 120, transcription initiation factor TFIID subunit 2",9," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0008237 - metallopeptidase activity, GO:0009630 - gravitropism, GO:0009506 - plasmodesma, GO:0008270 - zinc ion binding, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000397 - grain size",null,"Os09g0410300","LOC_Os09g24440.1",{"$nulls":6},"DOF7","OsDof7, Dof7, OsDof-7, OsDOF11, DOF11, OsDof9, Dof9","DNA BINDING WITH ONE FINGER 7","DNA BINDING WITH ONE FINGER 11",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0048364 - root development, GO:0003700 - transcription factor activity, GO:0010087 - phloem or xylem histogenesis, GO:0009409 - response to cold, GO:0015770 - sucrose transport, GO:0010067 - procambium histogenesis, GO:0042742 - defense response to bacterium, GO:0003677 - DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000346 - tiller number, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000175 - bacterial blight disease resistance, TO:0000227 - root length, TO:0000300 - glucose content, TO:0000303 - cold tolerance, TO:0006005 - fructose content, TO:0000328 - sucrose content","PO:0020110 - scutellum , PO:0020141 - stem node , PO:0009005 - root , PO:0005020 - vascular bundle , PO:0000071 - companion cell , PO:0005421 - parenchyma , PO:0000034 - vascular system ","Os02g0707200","LOC_Os02g47810.1","Os02g0212900","Os01g0803200","Os03g0300400",2.0953,0,null,"REL1","OsREL1","ROLLED AND ERECT LEAF 1","rolled and erect leaf 1, rolled and erect 1",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000396 - grain yield, TO:0000085 - leaf rolling, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0002730 - grain shape","PO:0009013 - portion of meristem tissue ","Os01g0863500"]
[{"$nulls":24},"Os03g0808100","Os01g0706000","Os01g0706000",-1.1941648,0,null,"Os08g0161800",3.6773403,"Os11g0604700",-1.2840924,{"$nulls":29},"_","SAD1","_","super apical dormant 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root","GO:0048364 - root development","TO:0000346 - tiller number, TO:0000235 - liguleless, TO:0000135 - leaf length, TO:0000226 - auricleless, TO:0000207 - plant height","PO:0007033 - whole plant development stage , PO:0007520 - root development stage , PO:0020106 - leaf sheath auricle , PO:0020105 - ligule ","Os08g0422600","LOC_Os08g32690.1",{"$nulls":7},"DGP1","OsDGP1","DEEP GREEN PANICLE 1","DEEP GREEN PANICLE1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0015995 - chlorophyll biosynthetic process, GO:0010109 - regulation of photosynthesis, GO:0009416 - response to light stimulus","TO:0000495 - chlorophyll content, TO:0000075 - light sensitivity, TO:0000221 - glume color, TO:0000326 - leaf color","PO:0009039 - glume ","Os01g0837600","LOC_Os01g62060.3, LOC_Os01g62060.2, LOC_Os01g62060.1",{"$nulls":6},"_","Prol-21, pro13b.2, PROLM20","_","13-kD prolamin, Prolamin 20",7," Seed - Physiological traits - Storage substances","GO:0033095 - aleurone grain, GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum, GO:0005773 - vacuole, GO:0045735 - nutrient reservoir activity",null,"PO:0009089 - endosperm ","Os07g0219300","LOC_Os07g11910.1",{"$nulls":6},"DOF17","OsDof17, Dof17, OsDof-17, OsDof18, Dof18","DNA BINDING WITH ONE FINGER 17","Dof zinc factor 17, Dof transcription factor 17",4," Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000303 - cold tolerance","PO:0009010 - seed ","Os04g0678400 ","LOC_Os04g58190.1, LOC_Os04g58190.2, LOC_Os04g58190.3","Os02g0513000","Os04g0677500","Os03g0700700",2.0942934,0,null,"REL2","OsREL2, OsDLT10, DLT10, RSD1, OsRSD1, RSD1/REL2","ROLLED AND ERECT LEAF 2","rolled and erect leaf 2, dwarf and low tillering 10, rice stomata developmental defect 1",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010374 - stomatal complex development, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0009965 - leaf morphogenesis, GO:0009733 - response to auxin stimulus","TO:0000276 - drought tolerance, TO:0000293 - chlorophyll-a content, TO:0000566 - stomatal frequency, TO:0000163 - auxin sensitivity, TO:0002681 - leaf curling, TO:0000329 - tillering ability, TO:0000447 - filled grain number, TO:0000661 - tiller bud dormancy, TO:0002730 - grain shape, TO:0000346 - tiller number, TO:0002672 - auxin content, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0001018 - transpiration rate, TO:0000326 - leaf color, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000295 - chlorophyll-b content, TO:0001027 - net photosynthetic rate","PO:0004709 - axillary bud , PO:0009000 - pulvinus , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0020141 - stem node ","Os10g0562700","LOC_Os10g41310.1"]
[{"$nulls":24},"Os04g0382300","Os01g0759700","Os01g0759700",-0.96910065,0,null,"Os08g0178400",3.6758735,"Os05g0378900",-1.2834529,{"$nulls":29},"RLCK57","OsRLCK57","RECEPTOR-LIKE CYTOPLASMIC KINASE 57","Receptor-like Cytoplasmic Kinase 57",1," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0032494 - response to peptidoglycan, GO:0050832 - defense response to fungus, GO:0010229 - inflorescence development, GO:0009742 - brassinosteroid mediated signaling, GO:0004674 - protein serine/threonine kinase activity, GO:0009741 - response to brassinosteroid stimulus, GO:0002237 - response to molecule of bacterial origin, GO:0010200 - response to chitin, GO:0009651 - response to salt stress","TO:0000050 - inflorescence branching, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0973500","LOC_Os01g74200.1",{"$nulls":7},"DVB1","OsDVB1","DECREASED VASCULAR BUNDLE 1","Decreased Vascular Bundle 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042407 - cristae formation, GO:0006520 - cellular amino acid metabolic process, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0010600 - regulation of auxin biosynthetic process","TO:0000227 - root length, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0002672 - auxin content, TO:0000420 - fertility related trait, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000218 - pollen abortion type, TO:0000472 - vascular bundle number, TO:0000370 - leaf width","PO:0009006 - shoot system , PO:0009051 - spikelet , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0005020 - vascular bundle ","Os03g0840900","LOC_Os03g62420.1",{"$nulls":6},"_","Prol-22, pro13b.3, PROLM22","_","prolamin 22",7," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os07g0219400","LOC_Os07g11920.1",{"$nulls":6},"DOF18","OsDof18, Dof18, OsDof-18, DLN119, OsDLN119, OsDof17, Dof17","DNA BINDING WITH ONE FINGER 18","Dof zinc factor 18, Dof transcription factor 18, DLN repressor 119, DLN motif protein 119",4," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0009010 - seed ","Os04g0567800 ","LOC_Os04g47990.2, LOC_Os04g47990.1","Os03g0130900","Os07g0693000","Os04g0659300",2.0896952,0,null,"SLG","OsSLG","SLENDER GRAIN","slender grain",8," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0010143 - cutin biosynthetic process, GO:0005634 - nucleus, GO:0010268 - brassinosteroid homeostasis, GO:0001558 - regulation of cell growth, GO:0010229 - inflorescence development, GO:0010090 - trichome morphogenesis, GO:0005737 - cytoplasm, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0005829 - cytosol, GO:0051179 - localization","TO:0000621 - inflorescence development trait, TO:0002676 - brassinosteroid content, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield","PO:0000034 - vascular system , PO:0025477 - floral organ primordium , PO:0009038 - palea , PO:0000229 - flower meristem , PO:0001083 - inflorescence development stage , PO:0009037 - lemma , PO:0020141 - stem node , PO:0006327 - spikelet meristem , PO:0025127 - primordium ","Os08g0562500","LOC_Os08g44840.1"]
[{"$nulls":24},"Os11g0461000","Os01g0772200","Os01g0772200",-1.1079339,0,null,"Os01g0702700",3.6745605,"Os12g0297500",-1.2831146,{"$nulls":29},"RLCK107","OsRLCK107","RECEPTOR-LIKE CYTOPLASMIC KINASE 107","Receptor-like Cytoplasmic Kinase 107",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0010200 - response to chitin, GO:0032494 - response to peptidoglycan, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000445 - seed number, TO:0000346 - tiller number, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os03g0274800","LOC_Os03g16740.1, LOC_Os03g16740.2",{"$nulls":7},"DAO","OsDAO","DIOXYGENASE FOR AUXIN OXIDATION","dioxygenase for auxin oxidation",4," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0050302 - indole-3-acetaldehyde oxidase activity, GO:0046872 - metal ion binding, GO:0010252 - auxin homeostasis, GO:0010152 - pollen maturation, GO:0009852 - auxin catabolic process, GO:0009555 - pollen development, GO:0051213 - dioxygenase activity, GO:0009901 - anther dehiscence","TO:0000696 - starch content, TO:0000391 - seed size, TO:0000484 - seed shape, TO:0000345 - seed viability, TO:0000421 - pollen fertility, TO:0002672 - auxin content, TO:0000437 - male sterility, TO:0000328 - sucrose content","PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os04g0475600","LOC_Os04g39980.1",{"$nulls":6},"_",null,"_","prolamin",5," Seed - Physiological traits - Storage substances",{"$nulls":11},"DOF19","OsDof19, Dof19, OsDof-19","DNA BINDING WITH ONE FINGER 19","Dof zinc factor 19, Dof transcription factor 19",5," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os05g0112200 ","LOC_Os05g02150.1","Os03g0170400","Os01g0858350","Os04g0431700",2.0722134,0,null,"BZR3","OsBZR3","BRASSINAZOLE RESISTANT 3","BRASSINAZOLE-RESISTANT3",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000371 - yield trait",null,"Os06g0552300","LOC_Os06g35900.1"]
[{"$nulls":24},"Os02g0243300","Os01g0773200","Os01g0773200",-1.318235,0,null,"Os05g0243200",3.6717606,"Os09g0339000",-1.281829,{"$nulls":29},"BBS1","OsRLCK109, RLCK109, OsBBS1, OSBBS1/OsRLCK109, PTK4, PTK4/BBS1, OsPTK4","BILATERAL BLADE SENESCENCE 1","Receptor-like Cytoplasmic Kinase 109, bilateral blade senescence 1, Protein Tyrosine Kinase 4",3," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0006970 - response to osmotic stress, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0045492 - xylan biosynthetic process, GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0009658 - chloroplast organization, GO:0009414 - response to water deprivation, GO:0010413 - glucuronoxylan metabolic process, GO:0010150 - leaf senescence","TO:0000397 - grain size, TO:0000227 - root length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000095 - osmotic response sensitivity, TO:0000524 - submergence tolerance, TO:0000259 - heat tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000249 - leaf senescence, TO:0001007 - coleoptile length, TO:0000298 - chlorophyll ratio, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility","PO:0007632 - seed maturation stage , PO:0007010 - whole plant fruit ripening stage , PO:0020103 - flag leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0001083 - inflorescence development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0001170 - seed development stage ","Os03g0364400","LOC_Os03g24930.1, LOC_Os03g24930.2",{"$nulls":7},"GEBP1","OsGeBP1, GeBP1","GLABROUS1 ENHANCER-BINDING PROTEIN 1","GLABROUS1 Enhancer-Binding Protein 1",1," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009735 - response to cytokinin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0010229 - inflorescence development, GO:0048653 - anther development, GO:0046688 - response to copper ion, GO:0046686 - response to cadmium ion, GO:0010043 - response to zinc ion, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009733 - response to auxin stimulus","TO:0000166 - gibberellic acid sensitivity, TO:0000351 - zinc sensitivity, TO:0000621 - inflorescence development trait, TO:0000021 - copper sensitivity, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity","PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0009066 - anther , PO:0000003 - whole plant , PO:0009037 - lemma , PO:0009038 - palea , PO:0001004 - anther development stage , PO:0001083 - inflorescence development stage ","Os01g0249900","LOC_Os01g14720.1",{"$nulls":6},"_",null,"_","glutelin",1," Seed - Physiological traits - Storage substances",{"$nulls":11},"PRR73","OsPRR73, Os-PRR73, Prr3, OsPRR3, OsRRA20, OsCCT11, CCT11","PSEUDO-RESPONSE REGULATOR 73","A-type RR 20, pseudo-response regulator 3, CCT domain-containing gene 11, CCT (CO, CO-LIKE and TOC1) domain protein 11, CCT domain protein 11",3," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0006351 - transcription, DNA-dependent, GO:0000156 - two-component response regulator activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048511 - rhythmic process, GO:0006979 - response to oxidative stress, GO:0048573 - photoperiodism, flowering, GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0007623 - circadian rhythm","TO:0000137 - days to heading, TO:0002657 - oxidative stress, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0006001 - salt tolerance, TO:0000608 - sodium content","PO:0006070 - mesophyll , PO:0009006 - shoot system , PO:0009005 - root ","Os03g0284100","LOC_Os03g17570.6, LOC_Os03g17570.5, LOC_Os03g17570.4, LOC_Os03g17570.3, LOC_Os03g17570.2, LOC_Os03g17570.1","Os03g0773700","Os02g0723200","Os09g0439800",2.0700114,0,null,"CGA1","Cga1, OsCga1, OsCGA1, OsGATA11, GATA11","CYTOKININ GATA TRANSCRIPTION FACTOR 1","Cytokinin GATA Transcription Factor1, Cytokinin GATA Transcription Factor 1, GATA Transcription Factor 11, GATA factor 11, CYTOKININ-INDUCED GATA1",2," Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0003682 - chromatin binding, GO:0009507 - chloroplast, GO:0009646 - response to absence of light, GO:0009658 - chloroplast organization, GO:0009735 - response to cytokinin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0046685 - response to arsenic, GO:0010260 - organ senescence, GO:0009416 - response to light stimulus, GO:0008270 - zinc ion binding, GO:0006366 - transcription from RNA polymerase II promoter, GO:0009414 - response to water deprivation, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0030154 - cell differentiation, GO:0019252 - starch biosynthetic process, GO:0005667 - transcription factor complex, GO:0005634 - nucleus","TO:0000201 - panicle color, TO:0000167 - cytokinin sensitivity, TO:0002715 - chloroplast development trait, TO:0000276 - drought tolerance, TO:0000031 - silicon sensitivity, TO:0002661 - seed maturation, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000495 - chlorophyll content, TO:0000011 - nitrogen sensitivity, TO:0000075 - light sensitivity, TO:0000128 - harvest index","PO:0007632 - seed maturation stage ","Os02g0220400","LOC_Os02g12790.1"]
[{"$nulls":24},"Os11g0181700","Os01g0784900","Os01g0784900",1.7664498,0,null,"Os03g0411300",3.6715295,"Os02g0749500",-1.2801074,{"$nulls":29},"RLCK118","OsRLCK118","RECEPTOR-LIKE CYTOPLASMIC KINASE 118","Receptor-like Cytoplasmic Kinase 118",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0042742 - defense response to bacterium, GO:0052033 - pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity, GO:0010200 - response to chitin, GO:0004674 - protein serine/threonine kinase activity, GO:0032494 - response to peptidoglycan, GO:0002237 - response to molecule of bacterial origin, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0043067 - regulation of programmed cell death, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus","TO:0000050 - inflorescence branching, TO:0000175 - bacterial blight disease resistance, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000445 - seed number, TO:0002677 - brassinosteroid sensitivity",null,"Os03g0821900","LOC_Os03g60710.1",{"$nulls":7},"MTR1","OsMTR1","MICROSPORE AND TAPETUM REGULATOR1","microspore and tapetum regulator 1",2," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009556 - microsporogenesis, GO:0005886 - plasma membrane, GO:0048658 - tapetal layer development, GO:0048653 - anther development","TO:0000437 - male sterility, TO:0000421 - pollen fertility","PO:0001004 - anther development stage ","Os02g0491300","LOC_Os02g28970.2, LOC_Os02g28970.1",{"$nulls":6},"_","Prol-01, CysR10, crP10, pro10.1","_","10kDa prolamin, sulfur-rich 10 kDa prolamin, 10 kDa sulfurrich prolamin, cysteine-rich 10kDa prolamin, Cys-rich 10-kDa prolamin",3," Seed - Physiological traits - Storage substances","GO:0005773 - vacuole, GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity, GO:0005783 - endoplasmic reticulum, GO:0033095 - aleurone grain","TO:0002661 - seed maturation","PO:0009089 - endosperm ","Os03g0766100",{"$nulls":7},"PRR95","OsPRR95, Os-PRR95, Prr2, OsPRR2, OsCCT33","PSEUDO-RESPONSE REGULATOR 95","pseudo-response regulator 2, CCT domain-containing gene 33, CCT (CO, CO-LIKE and TOC1) domain protein 33, CCT domain protein 33",9," Tolerance and resistance - Stress tolerance","GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0007623 - circadian rhythm, GO:0048511 - rhythmic process, GO:0005634 - nucleus, GO:0000156 - two-component response regulator activity, GO:0009266 - response to temperature stimulus, GO:0010378 - temperature compensation of the circadian clock, GO:0009409 - response to cold","TO:0000432 - temperature response trait, TO:0000303 - cold tolerance",null,"Os09g0532400","LOC_Os09g36220.2, LOC_Os09g36220.1","Os06g0541600","Os08g0468100","Os10g0183000",2.0630715,0,null,"GATA7","OsGATA7","GATA TRANSCRIPTION FACTOR 7","GATA transcription factor 7, GATA factor 7",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Other","GO:0009741 - response to brassinosteroid stimulus, GO:0003682 - chromatin binding, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0005667 - transcription factor complex, GO:0006366 - transcription from RNA polymerase II promoter, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0030154 - cell differentiation","TO:0000207 - plant height, TO:0000227 - root length, TO:0002730 - grain shape, TO:0000206 - leaf angle, TO:0000547 - primary branch number, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0002677 - brassinosteroid sensitivity","PO:0009029 - stamen , PO:0020142 - stem internode , PO:0009037 - lemma , PO:0009005 - root , PO:0025034 - leaf ","Os10g0557600 ","LOC_Os10g40810.1"]
[{"$nulls":24},"Os03g0267300","Os01g0808100","Os01g0808100",-2.9995167,0,null,"Os05g0430900",3.666186,"Os11g0703900",-1.2799143,{"$nulls":29},"Z15","OsRLCK181, RLCK181, OsZ15","ZEBRA LEAF 15","Receptor-like Cytoplasmic Kinase 181, Zebra leaf 15",5," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009658 - chloroplast organization, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0048316 - seed development","TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0218400","LOC_Os05g12680.1",{"$nulls":7},"ASNASE1  ","OsASNase1, ASNase1","ASPARAGINASE 1 ","asparaginase1, asparaginase 1",3," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006530 - asparagine catabolic process, GO:0016787 - hydrolase activity",null,"PO:0009051 - spikelet ","Os03g0597600 ","LOC_Os03g40070.1",{"$nulls":6},"_",null,"_","lectin, Agglutinin",4," Seed - Morphological traits - Embryo,  Tolerance and resistance - Stress tolerance","GO:0008061 - chitin binding","TO:0000432 - temperature response trait",null,"Os04g0173800","LOC_Os04g09390.1",{"$nulls":6},"MKK1","OsMKK1, OsMEK2, MEK2, OsMAPKK1, MAPKK1, OsMAP2K2, MAP2K2","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1","MAPK kinase 1",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0042542 - response to hydrogen peroxide, GO:0044242 - cellular lipid catabolic process, GO:0043408 - regulation of MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0006979 - response to oxidative stress, GO:0009414 - response to water deprivation, GO:0043068 - positive regulation of programmed cell death","TO:0006001 - salt tolerance, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress",null,"Os06g0147800","LOC_Os06g05520.1","Os06g0693200","Os03g0157300","Os12g0576600",2.042234,0,null,"GATA12","OsGATA12","GATA TRANSCRIPTION FACTOR 12","GATA transcription factor 12, GATA factor 12",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity,  Other","GO:0015996 - chlorophyll catabolic process, GO:0048364 - root development, GO:0048573 - photoperiodism, flowering, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0005667 - transcription factor complex, GO:0006366 - transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0009658 - chloroplast organization, GO:0010150 - leaf senescence, GO:0015995 - chlorophyll biosynthetic process, GO:0051301 - cell division","TO:0000128 - harvest index, TO:0000449 - grain yield per plant, TO:0000445 - seed number, TO:0000207 - plant height, TO:0000084 - root number, TO:0000227 - root length, TO:0000656 - root development trait, TO:0000340 - total soluble sugar content, TO:0000702 - starch concentration, TO:0002673 - amino acid content, TO:0002616 - flowering time, TO:0000241 - leaf number, TO:0000346 - tiller number, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content, TO:0000457 - total biomass yield, TO:0000344 - days to flower, TO:0000326 - leaf color, TO:0000371 - yield trait","PO:0001054 - 4 leaf senescence stage , PO:0001031 - 4 root elongation stage ","Os03g0831200","LOC_Os03g61570.1, LOC_Os03g61570.2"]
[{"$nulls":24},"Os02g0623300","Os01g0834400","Os01g0834400",-1.1052814,0,null,"Os04g0570700",3.665375,"Os02g0433600",-1.2790259,{"$nulls":29},"RLCK216","OsRLCK216, OsRRK1, RRK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 216","Receptor-like Cytoplasmic Kinase 216, Rop-interacting receptor-like kinase 1",6," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0002213 - defense response to insect","TO:0000180 - spikelet fertility, TO:0006001 - salt tolerance, TO:0000424 - brown planthopper resistance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os06g0693200","LOC_Os06g47820.1",{"$nulls":7},"ASNASE2","OsASNase2, ASNase2","ASPARAGINASE 2","asparaginase2, asparaginase 2",4," Biochemical character,  Vegetative organ - Leaf,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016787 - hydrolase activity, GO:0004067 - asparaginase activity, GO:0048316 - seed development, GO:0006530 - asparagine catabolic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009051 - spikelet , PO:0005020 - vascular bundle , PO:0008007 - nucellar projection , PO:0009001 - fruit , PO:0004006 - mesophyll cell , PO:0000071 - companion cell , PO:0020103 - flag leaf , PO:0001054 - 4 leaf senescence stage , PO:0000074 - parenchyma cell ","Os04g0650700  ","LOC_Os04g55710.1",{"$nulls":6},"_","RP6, Prol-18, OsEnS-93, pro13a.1, PROLM25","_","prolamin, prolamin RP6, 13 kDa prolamin, endosperm-specific gene 93, Prolamin 25",7," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0033095 - aleurone grain, GO:0005773 - vacuole, GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009089 - endosperm ","Os07g0206400","LOC_Os07g10570.1",{"$nulls":6},"MKK3","OsMKK3, OsMAPKK3, MAPKK3, OsMEK8a, MEK8a","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3","MAPK kinase 3",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect, GO:0042542 - response to hydrogen peroxide, GO:2000033 - regulation of seed dormancy, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium","TO:0000615 - abscisic acid sensitivity, TO:0000253 - seed dormancy, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance",null,"Os06g0473200","LOC_Os06g27890.4, LOC_Os06g27890.3, LOC_Os06g27890.2, LOC_Os06g27890.1","Os07g0686800","Os05g0415200","Os07g0125000",2.0372796,0,null,"PLS4","OsPLS4","PREMATURE LEAF SENESCENCE 4","3-Oxoacyl-[acyl-carrier-protein] reductase, Premature Leaf Senescence 4",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0016491 - oxidoreductase activity, GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process","TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000303 - cold tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0001027 - net photosynthetic rate, TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os04g0376300","LOC_Os04g30760.1"]
[{"$nulls":24},"Os07g0659500","Os01g0874300","Os01g0874300",1.2570273,0,null,"Os10g0467850",3.656643,"Os08g0461300",-1.2790204,{"$nulls":29},"PFT1","OsPFT1, OsMED25_1, MED25_1, OsMED25, MED25","PHYTOCHROME AND FLOWERING TIME 1","Mediator 25_1, mediator subunit 25",9," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010076 - maintenance of floral meristem identity, GO:0009737 - response to abscisic acid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009741 - response to brassinosteroid stimulus, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0009908 - flower development, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus","TO:0000734 - grain length, TO:0000148 - viral disease resistance, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0020105 - ligule , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0007615 - flower development stage ","Os09g0306700","LOC_Os09g13610.3, LOC_Os09g13610.1",{"$nulls":7},"DG1",null,"DEFECTIVE GLUME 1 ","defective glume 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0001558 - regulation of cell growth, GO:0009908 - flower development","TO:0002677 - brassinosteroid sensitivity, TO:0000622 - flower development trait, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000206 - leaf angle, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0002601 - stamen size, TO:0000215 - stamen anatomy and morphology trait, TO:0006012 - carpel anatomy and morphology trait, TO:0000162 - seed quality, TO:0000402 - grain width","PO:0007615 - flower development stage , PO:0007600 - floral organ differentiation stage ",{"$nulls":8},"OLE18","ole18, OsOLE18","18 KDA OLEOSIN","18 kDa oleosin, Oleosin KD18",3," Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010344 - seed oilbody biogenesis, GO:0016021 - integral to membrane, GO:0012511 - monolayer-surrounded lipid storage body, GO:0009628 - response to abiotic stimulus, GO:0019915 - lipid storage, GO:0050826 - response to freezing","TO:0000168 - abiotic stress trait",null,"Os03g0699000","LOC_Os03g49190.1",{"$nulls":6},"SMG1","OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6","SMALL GRAIN 1","MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11",2," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0008283 - cell proliferation, GO:0050832 - defense response to fungus, GO:0009741 - response to brassinosteroid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009690 - cytokinin metabolic process, GO:0009611 - response to wounding, GO:0045595 - regulation of cell differentiation, GO:0009742 - brassinosteroid mediated signaling, GO:0009751 - response to salicylic acid stimulus, GO:0048364 - root development, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009409 - response to cold, GO:0009743 - response to carbohydrate stimulus, GO:0080027 - response to herbivore, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0010229 - inflorescence development, GO:0000165 - MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus","TO:0000454 - stem borer resistance, TO:0000396 - grain yield, TO:0002669 - diterpenoid phytoalexin content, TO:0000615 - abscisic acid sensitivity, TO:0000397 - grain size, TO:0000439 - fungal disease resistance, TO:0000447 - filled grain number, TO:0002677 - brassinosteroid sensitivity, TO:0002660 - cytokinin content, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000734 - grain length","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage ","Os02g0787300","LOC_Os02g54600.1","Os11g0274100","Os11g0107266","Os07g0537200",2.0306778,0,null,"GC","Gc","_",null,1," Coloration - Chlorophyll,  Character as QTL - Yield and productivity",null,"TO:0000295 - chlorophyll-b content, TO:0001015 - photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000396 - grain yield"]
[{"$nulls":24},"Os06g0140700","Os02g0104100","Os02g0104100",-2.9555776,0,null,"Os10g0492400",3.6525242,"Os01g0172100",-1.2750273,{"$nulls":29},"CMF3","OsCCT03, CCT03, OsCCT3, CCT3, OsCMF3","CCT MOTIF FAMILY GENE 3","CCT domain-containing gene 3, CCT (CO, CO-LIKE and TOC1) domain protein 3, CCT domain protein 3, CCT MOTIF FAMILY (CMF) gene 3",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007623 - circadian rhythm, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0048578 - positive regulation of long-day photoperiodism, flowering, GO:0009648 - photoperiodism","TO:0000326 - leaf color, TO:0000137 - days to heading, TO:0000456 - spikelet number, TO:0000229 - photoperiod sensitivity, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000495 - chlorophyll content",null,"Os02g0148000","LOC_Os02g05470.1, LOC_Os02g05470.2",{"$nulls":7},"_","OsFH12, FH12, OsPP62, OsSTA117, PP62, STA117","_","formin homology 12, forming family protein 12, FH2 protein 12, FH2 domain protein 12, Protein phosphatase 62",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0045010 - actin nucleation, GO:0004721 - phosphoprotein phosphatase activity, GO:0005884 - actin filament",null,"PO:0009066 - anther ","Os04g0245000","LOC_Os04g17130.1",{"$nulls":6},"_","PAKRP1, OsKRP1, SIP18","_","phragmoplast-associated kinesin-related protein 1, PAKRP1 homolog, SKIP interacting protein 18, SKIPa-interacting protein 18, SKIPa-interacting protein 18",4," Seed","GO:0007049 - cell cycle, GO:0055046 - microgametogenesis, GO:0000914 - phragmoplast formation, GO:0005856 - cytoskeleton, GO:0005524 - ATP binding, GO:0007018 - microtubule-based movement, GO:0005871 - kinesin complex, GO:0008574 - plus-end-directed microtubule motor activity, GO:0009524 - phragmoplast, GO:0005874 - microtubule","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os04g0350300 ","LOC_Os04g28260.1",{"$nulls":6},"MKK6","OsMKK6, OsMEK1, MEK1, OsMAPKK6, MAPKK6, OsMPKK6, MPKK6","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6","MAPK kinase 6",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0009751 - response to salicylic acid stimulus, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0006468 - protein amino acid phosphorylation, GO:0009651 - response to salt stress","TO:0000160 - UV light sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0002669 - diterpenoid phytoalexin content, TO:0000175 - bacterial blight disease resistance",null,"Os01g0510100","LOC_Os01g32660.5, LOC_Os01g32660.4, LOC_Os01g32660.1, LOC_Os01g32660.2, LOC_Os01g32660.3","Os11g0625900","Os03g0776000","Os02g0175000",2.0241635,0,null,"_","AO, OsAO, AAO, OsAAO, OsAO3, AO3","_","aldehyde oxidase, abscisic aldehyde oxidase, aldehyde oxidase 3",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005829 - cytosol, GO:0005506 - iron ion binding, GO:0004854 - xanthine dehydrogenase activity, GO:0004031 - aldehyde oxidase activity, GO:0010555 - response to mannitol stimulus, GO:0009414 - response to water deprivation, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, GO:0009851 - auxin biosynthetic process, GO:0050660 - FAD binding, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0009688 - abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0010029 - regulation of seed germination, GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors, GO:0009115 - xanthine catabolic process, GO:0009055 - electron carrier activity","TO:0006001 - salt tolerance, TO:0000456 - spikelet number, TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000152 - panicle number","PO:0009010 - seed , PO:0009005 - root , PO:0025034 - leaf , PO:0009015 - portion of vascular tissue , PO:0000293 - guard cell , PO:0025395 - floral organ ","Os07g0281700","LOC_Os07g18120.1"]
[{"$nulls":24},"Os07g0489800","Os02g0109400","Os02g0109400",2.2809646,0,null,"Os06g0671000",3.6521225,"Os03g0227000",-1.2748643,{"$nulls":29},"_","FLL2","_","FLO2-LIKE2",7," Vegetative organ - Leaf",null,null,"PO:0025034 - leaf , PO:0020103 - flag leaf ","Os07g0422000","LOC_Os07g23990.1, LOC_Os07g23990.2",{"$nulls":7},"_","HAL1","_","half-pipe-like leaf1, half-pipe-like leaf 1",null," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000149 - seed width, TO:0000564 - spikelet width, TO:0002637 - leaf size, TO:0002681 - leaf curling, TO:0000614 - lemma shape, TO:0000575 - endosperm related trait","PO:0004001 - bulliform cell ",{"$nulls":8},"_","OsGBP3, GBP3","_","barley B recombinant like protein B, GAGA-binding transcription factor 3",10," Vegetative organ - Culm,  Seed - Morphological traits,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000734 - grain length, TO:0000207 - plant height",null,"Os10g0115200","LOC_Os10g02584.1, LOC_Os10g02584.2, LOC_Os10g02584.3",{"$nulls":6},"MKK10-2","OsMKK10-2, MKK10-2D, OsMPKK10-2, MPKK10-2, OsMPKK10-2D, MPKK10-2D, MPKK10.2, OsMAPKK10-2, MAPKK10-2, OsMEK3. MEK3","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-2","MAPK kinase 10.2",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000615 - abscisic acid sensitivity, TO:0000203 - bacterial leaf streak disease resistance, TO:0000276 - drought tolerance, TO:0000074 - blast disease",null,"Os03g0225100","LOC_Os03g12390.1","Os04g0640700","Os10g0203000","Os08g0441500",2.016576,0,null,"_","OsMED11_1, MED11_1","_","Mediator 11_1",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016592 - mediator complex","TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000734 - grain length",null,"Os02g0189100 ","LOC_Os02g09600.1, LOC_Os02g09600.2, LOC_Os02g09600.3"]
[{"$nulls":24},"Os07g0552800","Os02g0231000","Os02g0231000",2.8081427,0,null,"Os03g0679700",3.6519744,"Os07g0569000",-1.2728744,{"$nulls":29},"WSL4","OsSTA65, STA65","WHITE STRIPE LEAF 4","white stripe leaf4",2," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009658 - chloroplast organization, GO:0000373 - Group II intron splicing, GO:0009451 - RNA modification, GO:0003723 - RNA binding, GO:0004519 - endonuclease activity, GO:0042644 - chloroplast nucleoid, GO:0009409 - response to cold, GO:0048366 - leaf development","TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000069 - variegated leaf, TO:0000655 - leaf development trait, TO:0000303 - cold tolerance","PO:0009066 - anther , PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os02g0565400","LOC_Os02g35750.1, LOC_Os02g35750.2, LOC_Os02g35750.3",{"$nulls":7},"SEU2","OsSEU2","SEUSS 2","OsSEUSS 2",11," Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os11g0207100","LOC_Os11g10070.1",{"$nulls":6},"_","OsGBP1, GBP1","_","barley B recombinant like protein D, GAGA-binding transcription factor 1",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Other","GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000207 - plant height, TO:0000734 - grain length, TO:0002616 - flowering time, TO:0000137 - days to heading",null,"Os06g0130600","LOC_Os06g04010.1, LOC_Os06g04010.2",{"$nulls":6},"MKK5","OsMKK5, BUD1, OsBUD1","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5","MAPK kinase 5",6," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development","TO:0000167 - cytokinin sensitivity, TO:0000303 - cold tolerance, TO:0000656 - root development trait, TO:0000163 - auxin sensitivity","PO:0007520 - root development stage ","Os06g0191300","LOC_Os06g09180.1","Os01g0970600","Os01g0383900","Os02g0764700",2.0155592,0,null,"_","OsMED5_3, MED5_3","_","Mediator 5_3",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000402 - grain width, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield",null,"Os07g0681500","LOC_Os07g48350.1"]
[{"$nulls":24},"Os06g0704600","Os02g0315600","Os02g0315600",1.761166,0,null,"Os02g0257400",3.6515577,"Os07g0197100",-1.2687383,{"$nulls":29},"_","Dhr6, OsUBC5b, OsUBC16, UBC16","_","RAD6 DNA-repair homolog Dhr6, Ubiquitin-conjugation enzyme, Ubiquitin-conjugating enzyme 16",4," Biochemical character,  Vegetative organ - Leaf","GO:0016881 - acid-amino acid ligase activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0009737 - response to abscisic acid stimulus","TO:0000615 - abscisic acid sensitivity","PO:0025034 - leaf ","Os04g0667800","LOC_Os04g57220.1, LOC_Os04g57220.2, LOC_Os04g57220.3, LOC_Os04g57220.4",{"$nulls":7},"SEU3","OsSEU3","SEUSS 3","OsSEUSS 3",11," Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os06g0126000","LOC_Os06g03600.1, LOC_Os06g03600.2, LOC_Os06g03600.3",{"$nulls":6},"_","Ose705","_",null,11," Seed",null,"TO:0000653 - seed development trait, TO:0000620 - embryo development trait",{"$nulls":9},"MET1A","OsMET1a, OsMET1-1, MET1a, MET1-1, OsMET1, OsDMT702, DMT702","METHYLTRANSFERASE 1A","DNA methyltransferase 1-1, DNA methyltransferase 702",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006349 - genetic imprinting, GO:0009294 - DNA mediated transformation, GO:0009910 - negative regulation of flower development, GO:0010069 - zygote asymmetric cytokinesis in the embryo sac, GO:0006306 - DNA methylation, GO:0051607 - defense response to virus, GO:0010424 - DNA methylation on cytosine within a CG sequence, GO:0005634 - nucleus, GO:0010216 - maintenance of DNA methylation, GO:0016458 - gene silencing, GO:0003886 - DNA (cytosine-5-)-methyltransferase activity, GO:0005515 - protein binding, GO:0003677 - DNA binding, GO:0046686 - response to cadmium ion","TO:0000020 - black streak dwarf virus resistance, TO:0000168 - abiotic stress trait",null,"Os03g0798300","LOC_Os03g58400.1","Os03g0738400","Os07g0637000","Os06g0115400",2.0124905,0,null,"MED14_1 ","OsMED14_1","MEDIATOR 14_1 ","Mediator 14_1, Mediator subunit 14_1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0001944 - vasculature development, GO:0048653 - anther development, GO:0070847 - core mediator complex, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048366 - leaf development, GO:0009556 - microsporogenesis, GO:0051301 - cell division, GO:0010252 - auxin homeostasis, GO:0016592 - mediator complex","TO:0000146 - seed length, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000621 - inflorescence development trait, TO:0000382 - 1000-seed weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000370 - leaf width, TO:0001035 - stem width, TO:0000470 - vascular tissue related trait, TO:0000539 - large vascular bundle number, TO:0000558 - small vascular bundle number, TO:0000257 - root branching, TO:0001013 - lateral root number, TO:0000050 - inflorescence branching, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002672 - auxin content, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009066 - anther , PO:0025034 - leaf , PO:0009005 - root , PO:0009071 - anther wall tapetum , PO:0001004 - anther development stage , PO:0009051 - spikelet , PO:0020048 - microspore , PO:0005029 - root primordium , PO:0001083 - inflorescence development stage , PO:0001050 - leaf development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0332800 ","LOC_Os08g24400.1"]
[{"$nulls":24},"Os03g0126300","Os02g0325600","Os02g0325600",1.4843365,0,null,"Os08g0512700",3.650962,"Os12g0226700",-1.2686224,{"$nulls":29},"ELF1","OsPUB31, PUB31, OsPUB75, PUB75, TUD1, OsTUD1, DSG1","ERECT LEAF 1","ERECT LEAF1, erect leaf1, plant U-box-containing protein 75, U-box protein 75, Taihu Dwarf1, Dwarf and short grain 1",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits","GO:0009742 - brassinosteroid mediated signaling, GO:0004842 - ubiquitin-protein ligase activity, GO:0000151 - ubiquitin ligase complex, GO:0051781 - positive regulation of cell division, GO:0051512 - positive regulation of unidimensional cell growth, GO:0048366 - leaf development, GO:0009751 - response to salicylic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009741 - response to brassinosteroid stimulus, GO:0008283 - cell proliferation, GO:0005886 - plasma membrane","TO:0000173 - ethylene sensitivity, TO:0000146 - seed length, TO:0000040 - panicle length, TO:0000227 - root length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000472 - vascular bundle number, TO:0000397 - grain size, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0002681 - leaf curling, TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0002677 - brassinosteroid sensitivity","PO:0001050 - leaf development stage ","Os03g0232600","LOC_Os03g13010.1",{"$nulls":7},"WG7","OsCW-ZF7, CW-ZF7, CWZF7, OsWG7","WIDE GRAIN 7","cysteine-tryptophan-domain containing zinc finger protein on chromosome 7, CW-domain containing zinc finger protein 7, CW-domain containing protein 7",7," Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0031062 - positive regulation of histone methylation, GO:0035064 - methylated histone residue binding, GO:0008270 - zinc ion binding","TO:0000072 - awn length",null,"Os07g0669800","LOC_Os07g47360.3, LOC_Os07g47360.2, LOC_Os07g47360.1",{"$nulls":6},"_","OsLSD1, OsLOL1, OsLSD1.1, LSD1.1, LSD1","_","zinc finger protein LSD1, LESION SIMULATING DISEASE1.1, LESION SIMULATING DISEASE 1.1",8," Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance","GO:0005634 - nucleus, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0043069 - negative regulation of programmed cell death, GO:0009845 - seed germination, GO:0030154 - cell differentiation, GO:0009626 - plant-type hypersensitive response, GO:0006915 - apoptosis, GO:0034051 - negative regulation of plant-type hypersensitive response, GO:0012501 - programmed cell death, GO:0045595 - regulation of cell differentiation",null,"PO:0005360 - aleurone layer , PO:0007057 - 0 seed germination stage ","Os08g0159500 ","LOC_Os08g06280.1, LOC_Os08g06280.2, LOC_Os08g06280.3, LOC_Os08g06280.4, LOC_Os08g06280.7, LOC_Os08g06280.8, LOC_Os08g06280.9",{"$nulls":6},"PI41","Pi41(t), Pi41","PYRICULARIA ORYZAE RESISTANCE 41 ","Pyricularia grisea resistance 41, Magnaporthe grisea resistance 41, Blast resistance 41",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os06g0513050","Os03g0294700","Os01g0118600",2.0119407,0,null,"_","OsMED20_1, MED20_1","_","Mediator 20_1",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016592 - mediator complex, GO:0003713 - transcription coactivator activity, GO:0006357 - regulation of transcription from RNA polymerase II promoter","TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000402 - grain width, TO:0000734 - grain length",null,"Os09g0443500 ","LOC_Os09g27140.1, LOC_Os09g27140.2"]
[{"$nulls":24},"Os03g0828500","Os02g0565000","Os02g0565000",-1.0630603,0,null,"Os01g0743100",3.650673,"Os11g0703100",-1.2682179,{"$nulls":29},"PYL/RCAR9","OsPYL/RCAR9, PYL9, OsPYL9, OsPYL2, PYL2","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 9","pyrabactin resistance-like 9, PYR1-like 2, pyrabactin resistance 1-like 2",6," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0004864 - phosphoprotein phosphatase inhibitor activity, GO:0042803 - protein homodimerization activity, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0010025 - wax biosynthetic process, GO:0010119 - regulation of stomatal movement, GO:0042752 - regulation of circadian rhythm, GO:0010427 - abscisic acid binding, GO:0005737 - cytoplasm","TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000303 - cold tolerance, TO:0000293 - chlorophyll-a content, TO:0002667 - abscisic acid content, TO:0000396 - grain yield, TO:0000709 - leaf gloss, TO:0000522 - stomatal conductance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000470 - vascular tissue related trait",null,"Os06g0562200","LOC_Os06g36670.1",{"$nulls":7},"GPAT3","OsGPAT3","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 ","Glycerol-3-Phosphate Acyltransferase 3",11," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016311 - dephosphorylation, GO:0043067 - regulation of programmed cell death, GO:0005783 - endoplasmic reticulum, GO:0046890 - regulation of lipid biosynthetic process, GO:0048653 - anther development, GO:0016021 - integral to membrane, GO:0010584 - pollen exine formation, GO:0008152 - metabolic process, GO:0016746 - transferase activity, transferring acyl groups, GO:0009555 - pollen development, GO:0010152 - pollen maturation, GO:0016791 - phosphatase activity, GO:0010143 - cutin biosynthetic process, GO:0016020 - membrane","TO:0000437 - male sterility, TO:0000602 - total fat content, TO:0000187 - anther color, TO:0000245 - pollen free, TO:0000392 - sterility or fertility trait","PO:0020048 - microspore , PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0009071 - anther wall tapetum ","Os11g0679700 ","LOC_Os11g45400.1",{"$nulls":6},"LAR","OsLAR","LEUCOANTHOCYANIDIN REDUCTASE","leucoanthocyanidin reductase",3," Biochemical character,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0009813 - flavonoid biosynthetic process, GO:0010023 - proanthocyanidin biosynthetic process, GO:0033788 - leucoanthocyanidin reductase activity","TO:0000707 - pericarp color, TO:0000075 - light sensitivity",null,"Os03g0259400","LOC_Os03g15360.1",{"$nulls":6},"PI38","Pi38, Pi-38","PYRICULARIA ORYZAE RESISTANCE 38","Magnaporthe grisea resistance 38, Blast resistance 38",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os06g0514800","Os07g0168600","Os08g0159500",2.0106668,0,null,"_","OsMED12_2, MED12_2","_","Mediator 12_2",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0003713 - transcription coactivator activity, GO:0048316 - seed development, GO:0016592 - mediator complex","TO:0000653 - seed development trait, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0001170 - seed development stage ","Os10g0550100/Os10g0550066","LOC_Os10g40260.1"]
[{"$nulls":24},"Os06g0294600","Os02g0575700","Os02g0575700",-1.3882623,0,null,"Os03g0823800",3.6484153,"Os07g0673900",-1.2653424,{"$nulls":29},"PP2C53","OsPP2C53, OsPP81, OsABIL2, ABIL2","PROTEIN PHOSPHATASE 2C53","protein phosphatase 2C53, protein phosphatase 2C 53, protein phosphatase 81, OsABI-LIKE2, ABI-LIKE2, ABI-LIKE 2",5," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0048623 - seed germination on parent plant, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:2000038 - regulation of stomatal complex development, GO:0006470 - protein amino acid dephosphorylation, GO:0005634 - nucleus, GO:0046872 - metal ion binding, GO:0004722 - protein serine/threonine phosphatase activity, GO:0048364 - root development, GO:0010119 - regulation of stomatal movement","TO:0000566 - stomatal frequency, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000656 - root development trait, TO:0000145 - internode length, TO:0000276 - drought tolerance, TO:0000131 - leaf water potential, TO:0000043 - root anatomy and morphology trait, TO:0000615 - abscisic acid sensitivity, TO:0002665 - root hair length","PO:0007520 - root development stage , PO:0000293 - guard cell ","Os05g0592800","LOC_Os05g51510.2, LOC_Os05g51510.1",{"$nulls":7},"MFS2","OsMFS2, MOF1, OsMOF1","MULTI-FLORET SPIKELET 2","OsMPH1 homologue, MORE FLORET 1, more floret1",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0010076 - maintenance of floral meristem identity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0010582 - floral meristem determinacy, GO:0009909 - regulation of flower development, GO:0010093 - specification of floral organ identity","TO:0000622 - flower development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0006038 - floral organ number",null,"Os04g0566600","LOC_Os04g47890.1",{"$nulls":6},"DER1","OsDER1","DERLIN 1","DERLIN-like protein 1",5," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0006457 - protein folding, GO:0006986 - response to unfolded protein, GO:0010498 - proteasomal protein catabolic process, GO:0005783 - endoplasmic reticulum, GO:0006508 - proteolysis, GO:0034976 - response to endoplasmic reticulum stress, GO:0009408 - response to heat, GO:0009644 - response to high light intensity, GO:0042542 - response to hydrogen peroxide, GO:0005789 - endoplasmic reticulum membrane","TO:0000100 - shrunken endosperm, TO:0000104 - floury endosperm",null,"Os05g0187800","LOC_Os05g09550.1, LOC_Os05g09550.2, LOC_Os05g09550.3",{"$nulls":6},"PI32","Pi-32(t), Pi32(t)*, Pi32(t)","PYRICULARIA ORYZAE RESISTANCE 32","Magnaporthe grisea resistance 32, Blast resistance 32",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os09g0409000","Os01g0147900","Os06g0638700",1.9984269,0,null,"_","OsMED4_2, MED4_2","_","Mediator 4_2",11," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000396 - grain yield, TO:0000402 - grain width, TO:0000734 - grain length, TO:0000382 - 1000-seed weight","PO:0009010 - seed , PO:0001170 - seed development stage ",null,"LOC_Os11g05150"]
[{"$nulls":24},"Os08g0532200","Os02g0618400","Os02g0618400",2.4558494,0,null,"Os07g0553000",3.6464036,"Os04g0572100",-1.2653003,{"$nulls":29},"YGL10","CAO, CAO1, OsCAO1, Oslls1, Lls1, DVR, PGL","YELLOW-GREEN LEAF 10","chlorophyll a oxygenase, Chlorophyll a oxygenase 1, chlorophyllide a oxygenate 1, Lls1-homologue of maize, \\3, 8-divinyl chlorophyllide a 8-vinyl reductase\\\", pale green leaf, yellow green leaf 10\"",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005506 - iron ion binding, GO:0042542 - response to hydrogen peroxide, GO:0051607 - defense response to virus, GO:0009416 - response to light stimulus, GO:0048366 - leaf development, GO:0046686 - response to cadmium ion, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0031969 - chloroplast membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0060548 - negative regulation of cell death, GO:0009658 - chloroplast organization, GO:0006952 - defense response, GO:0009645 - response to low light intensity stimulus, GO:0010109 - regulation of photosynthesis, GO:0015996 - chlorophyll catabolic process, GO:0015995 - chlorophyll biosynthetic process, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0010027 - thylakoid membrane organization, GO:0009535 - chloroplast thylakoid membrane, GO:0050832 - defense response to fungus, GO:0009408 - response to heat","TO:0000326 - leaf color, TO:0000397 - grain size, TO:0000655 - leaf development trait, TO:0000162 - seed quality, TO:0000293 - chlorophyll-a content, TO:0000259 - heat tolerance, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000460 - light intensity sensitivity, TO:0000075 - light sensitivity, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000196 - amylose content, TO:0000455 - seed set percent, TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000063 - mimic response, TO:0002759 - grain number, TO:0000346 - tiller number, TO:0000249 - leaf senescence, TO:0002757 - flag leaf length, TO:0002758 - flag leaf lamina width, TO:0000295 - chlorophyll-b content, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000211 - gel consistency, TO:0000266 - chalky endosperm, TO:0000298 - chlorophyll ratio","PO:0001050 - leaf development stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os10g0567400","LOC_Os10g41780.4, LOC_Os10g41780.2, LOC_Os10g41780.3, LOC_Os10g41780.1",{"$nulls":7},"_","PEG1, OsPEG1","_","paternally expressed gene1",1," Biochemical character,  Reproductive organ,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0031418 - L-ascorbic acid binding, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000391 - seed size, TO:0000304 - seed thickness, TO:0000696 - starch content","PO:0009089 - endosperm , PO:0000084 - plant sperm cell ","Os01g0180900 ","LOC_Os01g08570.1",{"$nulls":6},"_","OsBiP1, BiP1, BiP, Bip3, OsBiP3, BIP1/OsBIP3, OsMed37_2, Med37_2","_","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2",2," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005788 - endoplasmic reticulum lumen, GO:0005524 - ATP binding, GO:0005618 - cell wall, GO:0006986 - response to unfolded protein, GO:0034975 - protein folding in endoplasmic reticulum, GO:0034976 - response to endoplasmic reticulum stress, GO:0009408 - response to heat, GO:0005886 - plasma membrane, GO:0005773 - vacuole, GO:0046686 - response to cadmium ion, GO:0010197 - polar nucleus fusion, GO:0005730 - nucleolus, GO:0006458 - 'de novo' protein folding","TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000196 - amylose content, TO:0000259 - heat tolerance",null,"Os02g0115900","LOC_Os02g02410.1",{"$nulls":6},"PI31","Pi-31(t), Pi31(t)*, Pi31(t)","PYRICULARIA ORYZAE RESISTANCE 31","Magnaporthe grisea 31, Blast resistance 31",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os01g0840100","Os11g0572500","Os01g0495900",1.9984254,0,null,"SFR6","OsMed16_1, Med16_1, OsSFR6, OsMED16, MED16","SENSITIVE TO FREEZING-6","Mediator 16_1, Mediator complex subunit 16, Mediator subunit 16",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0070265 - necrotic cell death, GO:0010942 - positive regulation of cell death, GO:0045926 - negative regulation of growth, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006970 - response to osmotic stress, GO:0050826 - response to freezing, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0010310 - regulation of hydrogen peroxide metabolic process","TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000173 - ethylene sensitivity, TO:0000495 - chlorophyll content, TO:0000357 - growth and development trait, TO:0000371 - yield trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000149 - seed width, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance","PO:0009047 - stem , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0020105 - ligule , PO:0025034 - leaf , PO:0009005 - root ","Os10g0498700","LOC_Os10g35560.2, LOC_Os10g35560.1"]
[{"$nulls":24},"Os04g0234600","Os02g0635800","Os02g0635800",4.7890244,0,null,"Os04g0375900",3.6419516,"Os08g0542100",-1.265213,{"$nulls":29},"_","DEC","_","DECUSSATE",12," Vegetative organ - Leaf","GO:0009736 - cytokinin mediated signaling, GO:0060771 - phyllotactic patterning","TO:0006014 - phyllotaxy, TO:0000167 - cytokinin sensitivity",null,"Os12g0465700","LOC_Os12g27994.1, LOC_Os12g27994.2",{"$nulls":7},"LESR",null,"LOW EXPOSURE STIGMA RATE","low exposure stigma rate",10," Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000044 - stigma exsertion",{"$nulls":9},"BZIP48","OsbZIP48, OsHY5, HY5","b-ZIP TRANSCRIPTION FACTOR 48","b-ZIP transcription factor 48, ELONGATED HYPOCOTYL 5",6," Vegetative organ - Culm,  Coloration - Anthocyanin,  Seed - Morphological traits,  Other","GO:0003700 - transcription factor activity, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0032502 - developmental process, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000486 - seed color, TO:0000207 - plant height, TO:0000071 - anthocyanin content","PO:0007632 - seed maturation stage ","Os06g0601500","LOC_Os06g39960.1",{"$nulls":6},"BPH23","Bph23(t)","BROWN PLANTHOPPER RESISTANCE 23",null,null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os02g0169300","Os02g0325600","Os05g0208100",1.9959124,0,null,"LLB","OsLLB, LCMT, OsMTS1, MTS1, PLS3","LESION AND LAMINA BENDING ","leucine carboxyl methyltransferase, Premature leaf senescence 3, O-methyltransferase 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus, GO:0005829 - cytosol, GO:0008219 - cell death, GO:0010150 - leaf senescence, GO:0030187 - melatonin biosynthetic process, GO:0005634 - nucleus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0048573 - photoperiodism, flowering, GO:0005886 - plasma membrane, GO:0032259 - methylation, GO:0042742 - defense response to bacterium, GO:0009507 - chloroplast, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0042542 - response to hydrogen peroxide, GO:0009742 - brassinosteroid mediated signaling","TO:0000295 - chlorophyll-b content, TO:0000326 - leaf color, TO:0002616 - flowering time, TO:0002668 - jasmonic acid content, TO:0000175 - bacterial blight disease resistance, TO:0000396 - grain yield, TO:0000074 - blast disease, TO:0002671 - momilactone B content, TO:0002670 - momilactone A content, TO:0000137 - days to heading, TO:0001015 - photosynthetic rate, TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response, TO:0002688 - leaf lamina joint bending, TO:0000293 - chlorophyll-a content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os07g0247100 ","LOC_Os07g14350.1, LOC_Os07g14350.2"]
[{"$nulls":24},"Os04g0359100","Os02g0661100","Os02g0661100",1.6721458,0,null,"Os03g0205700",3.6375809,"Os09g0346400",-1.2646421,{"$nulls":29},"CYP51G3","OsCYP51G3","P-450 51G3","Cytochrome P450 51G3",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016132 - brassinosteroid biosynthetic process, GO:0020037 - heme binding, GO:0007623 - circadian rhythm, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000053 - pollen sterility, TO:0006031 - inflorescence size, TO:0000449 - grain yield per plant, TO:0000445 - seed number",null,"Os05g0211100","LOC_Os05g12040.1",{"$nulls":7},"RPL1",null,"RICE PLASTICITY 1","rice plasticity 1",6," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0035066 - positive regulation of histone acetylation, GO:0006306 - DNA methylation, GO:0009736 - cytokinin mediated signaling, GO:0005634 - nucleus, GO:0009735 - response to cytokinin stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus","TO:0020019 - secondary shoot branch number, TO:0000346 - tiller number, TO:0006032 - panicle size, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000145 - internode length, TO:0020020 - primary shoot branch number, TO:0000456 - spikelet number","PO:0006016 - leaf epidermis , PO:0025178 - stem epidermis , PO:0006036 - root epidermis , PO:0005020 - vascular bundle ","Os06g0245600","LOC_Os06g13640.1, LOC_Os06g13640.2",{"$nulls":6},"BZIP72","OsbZIP72, OsAREB2, OsABF4, Osbzip72, OsABI5, ABI5","b-ZIP TRANSCRIPTION FACTOR 72","b-ZIP transcription factor 72, AREB/ABF-family protein 2",9," Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009738 - abscisic acid mediated signaling, GO:0010150 - leaf senescence, GO:0010029 - regulation of seed germination, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000249 - leaf senescence","PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage ","Os09g0456200","LOC_Os09g28310.1",{"$nulls":6},"BPH24","Bph24(t)","BROWN PLANTHOPPER RESISTANCE 24",null,null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os01g0140500","Os09g0555500","Os03g0276800",1.9844579,0,null,"SNAT1","OsSNAT1, OsSNAT, SNAT","SEROTONIN N-ACETYLTRANSFERASE-1","serotonin N-acetyltransferase-1, serotonin N-acetyltransferase 1",5," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006474 - N-terminal protein amino acid acetylation, GO:0009416 - response to light stimulus, GO:0009409 - response to cold, GO:0004596 - peptide alpha-N-acetyltransferase activity, GO:0046686 - response to cadmium ion, GO:0031248 - protein acetyltransferase complex, GO:0009408 - response to heat, GO:0030187 - melatonin biosynthetic process, GO:0009646 - response to absence of light, GO:0005634 - nucleus, GO:0010150 - leaf senescence, GO:0009414 - response to water deprivation, GO:0009725 - response to hormone stimulus","TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000075 - light sensitivity, TO:0000249 - leaf senescence, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000401 - plant growth hormone sensitivity","PO:0007041 - inflorescence emergence stage ","Os05g0481000","LOC_Os05g40260.1"]
[{"$nulls":24},"Os02g0128200","Os02g0696900","Os02g0696900",1.2427502,0,null,"Os01g0176500",3.628022,"Os03g0564200",-1.2641311,{"$nulls":29},"LYL1","OsChl P, CHL P, ChlP, OsGGRI, GGRI, OsGGR, GGR, OsGGR1, GGR1, OsGGR1/LYL1/OsChl P","LIGHT-INDUCED YELLOW LEAF 1","Geranylgeranyl reductase, Light-Induced Yellow Leaf 1, Geranylgeranyl Reductase I, Geranylgeranyl-diphosphate reductase, geranylgeranyl reductase 1",2," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll","GO:0015995 - chlorophyll biosynthetic process, GO:0000302 - response to reactive oxygen species, GO:0009416 - response to light stimulus, GO:0009535 - chloroplast thylakoid membrane, GO:0010189 - vitamin E biosynthetic process, GO:0009658 - chloroplast organization, GO:0045550 - geranylgeranyl reductase activity, GO:0009645 - response to low light intensity stimulus, GO:0009644 - response to high light intensity, GO:0035304 - regulation of protein amino acid dephosphorylation, GO:0031969 - chloroplast membrane, GO:0019684 - photosynthesis, light reaction, GO:0019344 - cysteine biosynthetic process, GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","TO:0000495 - chlorophyll content, TO:0000075 - light sensitivity, TO:0000326 - leaf color","PO:0025034 - leaf ","Os02g0744900","LOC_Os02g51080.1",{"$nulls":7},"AN3-1","An3-1","AWN3-1","Awn3-1, Awn 3-1",3," Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000072 - awn length, TO:0002734 - awn presence",null,"Os03g0418600","LOC_Os03g30519.1, LOC_Os03g30519.2",{"$nulls":6},"BZIP76","OsbZIP76, DLN229, OsDLN229","b-ZIP TRANSCRIPTION FACTOR 76","b-ZIP transcription factor 76, DLN repressor 229, DLN motif protein 229",9," Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0005634 - nucleus, GO:0010342 - cellularization of endosperm, GO:0009960 - endosperm development, GO:0005737 - cytoplasm","TO:0000696 - starch content, TO:0000304 - seed thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000196 - amylose content, TO:0000391 - seed size","PO:0009089 - endosperm , PO:0007633 - endosperm development stage ","Os09g0520400","LOC_Os09g34880.1",{"$nulls":6},"BPH25","Bph25(t)","BROWN PLANTHOPPER RESISTANCE 25",null,6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":3},"Os05g0247100","Os05g0551000","Os02g0656600",1.982606,0,null,"RAE2 ","OsEPFL1, EPFL1, GAD1, OsGAD1, OsRAE2, GLA, OsGLA, GAD1/RAE2","REGULATOR OF AWN ELONGATION 2 ","EPIDERMAL PATTERNING FACTOR-LIKE 1, Regulator of Awn Elongation 2, \\GRAIN NUMBER, GRAIN LENGTH AND AWN DEVELOPMENT1\\\", Grain Length and Awn Development\"",8," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010052 - guard cell differentiation","TO:0000072 - awn length, TO:0002734 - awn presence, TO:0002759 - grain number, TO:0000734 - grain length, TO:0002656 - starch grain shape, TO:0000266 - chalky endosperm, TO:0000162 - seed quality",null,"Os08g0485500 ","LOC_Os08g37890.1"]
[{"$nulls":24},"Os12g0540900","Os02g0700600","Os02g0700600",2.1961493,0,null,"Os10g0552700",3.6247933,"Os01g0355500",-1.2626818,{"$nulls":29},"PUT3","OsPUT3, OsPUT3.1, OsPAR1, OsLAT5","POLYAMINE UPTAKE TRANSPORTER 3","PA uptake transporter 3, polyamine uptake transporter 3, paraquat resistant1, paraquat resistant 1",3," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Heading date","GO:0015848 - spermidine transport, GO:0010150 - leaf senescence, GO:0015171 - amino acid transmembrane transporter activity, GO:0015606 - spermidine transmembrane transporter activity, GO:2000028 - regulation of photoperiodism, flowering, GO:0009507 - chloroplast, GO:0016021 - integral to membrane","TO:0002616 - flowering time, TO:0000249 - leaf senescence",null,"Os03g0576900","LOC_Os03g37984.1, LOC_Os03g37984.2, LOC_Os03g37984.3, LOC_Os03g37984.4, LOC_Os03g37984.5",{"$nulls":7},"_","OsFDML1, FDML1","_","FACTOR OF DNA METHYLATION LIKE 1",2," Reproductive organ - Spikelet, flower, glume, awn","GO:0031047 - gene silencing by RNA, GO:0009909 - regulation of flower development, GO:0005634 - nucleus","TO:0006012 - carpel anatomy and morphology trait, TO:0006022 - floral organ development trait","PO:0007615 - flower development stage , PO:0009072 - plant ovary , PO:0009073 - stigma , PO:0009051 - spikelet , PO:0025477 - floral organ primordium , PO:0020003 - plant ovule ","Os02g0293300                     ","LOC_Os02g19130.1",{"$nulls":6},"LEA7","OsLEA7, OsLEA7a, OsLEA7b, OsLEA7c","LATE EMBRYOGENESIS ABUNDANT PROTEIN 7","late embryogenesis abundant protein 7",3," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0080112 - seed growth, GO:0080113 - regulation of seed growth, GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0009269 - response to desiccation, GO:0048366 - leaf development","TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000180 - spikelet fertility",null,"Os03g0843300","LOC_Os03g62620.2, LOC_Os03g62620.3, LOC_Os03g62620.4",{"$nulls":6},"BPH26","Bph26(t)","BROWN PLANTHOPPER RESISTANCE 26",null,12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",null,"Os12g0559400","LOC_Os12g37280.1, LOC_Os12g37290.1","Os03g0657100","Os07g0490400","Os06g0695600",1.9816061,0,null,"MYB1R1 ","OsMYB1R1, 1R-MYB1","MYB-RELATED TRANSCRIPTION FACTOR 1","MYB-related transcription factor 1, MYB-related 1, single MYB-like domain protein 1",1," Reproductive organ - Heading date,  Character as QTL - Yield and productivity,  Other","GO:2000028 - regulation of photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006357 - regulation of transcription from RNA polymerase II promoter, GO:0035066 - positive regulation of histone acetylation, GO:0003713 - transcription coactivator activity, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0016573 - histone acetylation, GO:0006338 - chromatin remodeling, GO:0008270 - zinc ion binding, GO:0003700 - transcription factor activity","TO:0000461 - basic vegetative phase, TO:0006021 - vegetative to reproductive phase transition trait, TO:0002616 - flowering time, TO:0000396 - grain yield",null,"Os01g0192300","LOC_Os01g09640.1"]
[{"$nulls":24},"Os02g0697400","Os02g0739700","Os02g0739700",1.1414914,0,null,"Os12g0503000",3.6242936,"Os06g0667100",-1.2620894,{"$nulls":29},"LACS9","OsLACS1, LACS1, OsLACS9","LONG-CHAIN ACYL-COA SYNTHETASE 9","Long-chain acyl-CoA synthetase 1",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0005983 - starch catabolic process, GO:0009527 - plastid outer membrane, GO:0016020 - membrane, GO:0040007 - growth, GO:0003824 - catalytic activity, GO:0009941 - chloroplast envelope","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000145 - internode length",null,"Os12g0168700","LOC_Os12g07110.1, LOC_Os12g07110.2",{"$nulls":7},"ERS1 ","OsERS1","GLUTAMYL-TRNA SYNTHETASE 1","glutamyl-tRNA synthetase 1",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0006424 - glutamyl-tRNA aminoacylation, GO:0006425 - glutaminyl-tRNA aminoacylation, GO:0004819 - glutamine-tRNA ligase activity, GO:0004818 - glutamate-tRNA ligase activity, GO:0048654 - anther morphogenesis, GO:0048653 - anther development, GO:0017102 - methionyl glutamyl tRNA synthetase complex, GO:0005739 - mitochondrion, GO:0005829 - cytosol","TO:0000214 - anther shape","PO:0001004 - anther development stage ","Os10g0369000","LOC_Os10g22380.1, LOC_Os10g22380.2",{"$nulls":6},"_","GluB, GluB-1a, OsGluB-1a, GLUB1A","_","Glutelin B isoform, Glutelin B-1a",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",null,null,"Os02g0249800","LOC_Os02g15178.1",{"$nulls":6},"PI46","Pi46(t)","PYRICULARIA ORYZAE RESISTANCE 46","Magnaporthe grisea resistance 46, Blast resistance 46",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os06g0159900","Os05g0472700","Os06g0203800",1.9706968,0,null,"TSD2 ","OsTSD2, OsQUA2, QUA2","TUMOROUS SHOOT DEVELOPMENT 2","TUMOROUS SHOOT DEVELOPMENT2, QUASIMODO2, QUASIMODO 2",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0050801 - ion homeostasis, GO:0009827 - plant-type cell wall modification, GO:0009635 - response to herbicide, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0005768 - endosome, GO:0005774 - vacuolar membrane, GO:0010618 - aerenchyma formation, GO:0016021 - integral to membrane, GO:0010394 - homogalacturonan metabolic process, GO:0009733 - response to auxin stimulus, GO:0005794 - Golgi apparatus, GO:0009651 - response to salt stress, GO:0015996 - chlorophyll catabolic process, GO:0008168 - methyltransferase activity, GO:0032259 - methylation, GO:0045488 - pectin metabolic process, GO:0005802 - trans-Golgi network, GO:0007155 - cell adhesion, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0045489 - pectin biosynthetic process, GO:0048364 - root development, GO:0010150 - leaf senescence","TO:0000396 - grain yield, TO:0020003 - shoot potassium content, TO:0020004 - shoot sodium content, TO:0000058 - herbicide sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0001013 - lateral root number, TO:0000328 - sucrose content, TO:0002668 - jasmonic acid content, TO:0000249 - leaf senescence, TO:0000495 - chlorophyll content, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009047 - stem , PO:0007520 - root development stage , PO:0005020 - vascular bundle , PO:0001031 - 4 root elongation stage ","Os02g0755000","LOC_Os02g51860.1"]
[{"$nulls":24},"Os12g0480100","Os02g0783100","Os02g0783100",-1.3555899,0,null,"Os11g0215100",3.623002,"Os04g0672100",-1.2613779,{"$nulls":29},"HMS1","CER6/CUT1, CER6, CUT1, OsCER6, WSL4, KCS6, OsKCS6, CER6/CUT1/KCS6, OsHMS1","HUMIDITY-SENSITIVE GENIC MALE STERILITY 1","eceriferum6, eceriferum 6, cuticular 1, wax crystal-sparse leaf 4, beta-ketoacyl-coenzyme A synthase 6, beta-ketoacyl-CoA synthase 6",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0009270 - response to humidity, GO:0048653 - anther development, GO:0010584 - pollen exine formation, GO:0010208 - pollen wall assembly, GO:0009414 - response to water deprivation, GO:0005783 - endoplasmic reticulum, GO:0009846 - pollen germination, GO:0009876 - pollen adhesion, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0016020 - membrane, GO:0006633 - fatty acid biosynthetic process, GO:0009859 - pollen hydration, GO:0010025 - wax biosynthetic process, GO:0009860 - pollen tube growth, GO:0042761 - very-long-chain fatty acid biosynthetic process, GO:0009555 - pollen development","TO:0000276 - drought tolerance, TO:0000180 - spikelet fertility, TO:0000346 - tiller number, TO:0000455 - seed set percent, TO:0000199 - genic male sterility, TO:0000604 - fat and essential oil content, TO:0000441 - humidity related trait, TO:0000207 - plant height","PO:0001007 - pollen development stage , PO:0009071 - anther wall tapetum , PO:0009066 - anther , PO:0001004 - anther development stage , PO:0025386 - cuticular wax ","Os03g0220100","LOC_Os03g12030.1",{"$nulls":7},"GATA10","OsGATA10","GATA TRANSCRIPTION FACTOR 10","GATA transcription factor 10, GATA factor 10",1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0030154 - cell differentiation, GO:0003682 - chromatin binding, GO:0005634 - nucleus, GO:0005667 - transcription factor complex, GO:0006366 - transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0048653 - anther development","TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os01g0976800","LOC_Os01g74540.1",{"$nulls":6},"GLUC","GluC, OsEnS-36, EnS-36, GLU2.2, GluC-1","GLUTELIN C","Glutelin type-C, endosperm-specific gene 36, gluten 2.2",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009415 - response to water, GO:0048316 - seed development, GO:0000003 - reproduction, GO:0045735 - nutrient reservoir activity, GO:0009791 - post-embryonic development, GO:0009651 - response to salt stress","TO:0000653 - seed development trait, TO:0000237 - water stress trait, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage , PO:0009089 - endosperm , PO:0006220 - central endosperm ","Os02g0453600","LOC_Os02g25640.2, LOC_Os02g25640.1",{"$nulls":6},"PI42","Pi42(t), Pi-42(t)","PYRICULARIA ORYZAE RESISTANCE 42 ","Pyricularia grisea resistance 42, Magnaporthe grisea resistance 42, Blast resistance 42",12," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0009620 - response to fungus, GO:0006952 - defense response",null,null,"Os12g0281600","LOC_Os12g18374.1, LOC_Os12g18374.2","Os10g0567400","Os09g0528200","Os04g0545000",1.9589577,0,null,"PT14","OsPT14, OsPHT2;1, PHT2;1","PHOSPHATE TRANSPORTER 14","phosphate transporter 14, phosphate transporter 2;1",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006558 - L-phenylalanine metabolic process, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0033500 - carbohydrate homeostasis, GO:0010109 - regulation of photosynthesis, GO:0055062 - phosphate ion homeostasis, GO:0009411 - response to UV, GO:0009941 - chloroplast envelope, GO:0005887 - integral to plasma membrane, GO:0016036 - cellular response to phosphate starvation, GO:0005886 - plasma membrane, GO:0042594 - response to starvation, GO:0042176 - regulation of protein catabolic process, GO:0051555 - flavonol biosynthetic process, GO:0051553 - flavone biosynthetic process, GO:0009416 - response to light stimulus, GO:0010224 - response to UV-B, GO:0005315 - inorganic phosphate transmembrane transporter activity","TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000102 - phosphorus sensitivity, TO:0000290 - flavonoid content, TO:0000160 - UV light sensitivity, TO:0000075 - light sensitivity, TO:0000601 - UV-B light sensitivity, TO:0000357 - growth and development trait, TO:0001015 - photosynthetic rate, TO:0000396 - grain yield, TO:0002673 - amino acid content, TO:0000207 - plant height, TO:0000457 - total biomass yield, TO:0000442 - plant fresh weight, TO:0000328 - sucrose content, TO:0000702 - starch concentration, TO:0002674 - tryptophan content","PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0025257 - primary root elongation zone , PO:0000258 - root cortex , PO:0005020 - vascular bundle , PO:0004006 - mesophyll cell , PO:0009039 - glume , PO:0009037 - lemma , PO:0009038 - palea , PO:0009010 - seed ","Os02g0593500","LOC_Os02g38020.2, LOC_Os02g38020.1"]
[{"$nulls":24},"Os04g0106400","Os03g0109600","Os03g0109600",0.9992018,0,null,"Os01g0951100",3.6229203,"Os08g0176900",-1.2607719,{"$nulls":29},"RFP1","OsRZFP34, OsRFP1, RZFP34, UCIP18, OsUCIP18","RING FINGER PROTEIN 1","RING zinc-finger protein 34, RING finger protein 1, OsUBC26 Interact Protein 18",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0043266 - regulation of potassium ion transport, GO:0005513 - detection of calcium ion, GO:0019722 - calcium-mediated signaling, GO:0008270 - zinc ion binding, GO:0009738 - abscisic acid mediated signaling",null,null,"Os01g0719100","LOC_Os01g52110.9, LOC_Os01g52110.8, LOC_Os01g52110.7, LOC_Os01g52110.5, LOC_Os01g52110.4, LOC_Os01g52110.1, LOC_Os01g52110.2, LOC_Os01g52110.3",{"$nulls":7},"GD1","OsVAL1, VAL1, DLN186, OsDLN186","GERMINATION DEFECTIVE 1","germination-defective1, DLN repressor 186, DLN motif protein 186",7," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009743 - response to carbohydrate stimulus, GO:0009685 - gibberellin metabolic process, GO:0005634 - nucleus, GO:0048366 - leaf development, GO:0033500 - carbohydrate homeostasis, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0009908 - flower development, GO:0010029 - regulation of seed germination, GO:0003677 - DNA binding, GO:0016564 - transcription repressor activity, GO:0008270 - zinc ion binding","TO:0000696 - starch content, TO:0000622 - flower development trait, TO:0000207 - plant height, TO:0000333 - sugar content, TO:0002675 - gibberellic acid content","PO:0007131 - seedling development stage , PO:0007057 - 0 seed germination stage , PO:0007615 - flower development stage ","Os07g0563300","LOC_Os07g37610.1",{"$nulls":6},"GLUD1","GluD1, GluD-1, OsEnS-33, EnS-33, GluD","GLUTELIN D","Glutelin type-D, endosperm-specific gene 33",2," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",null,"PO:0006220 - central endosperm ","Os02g0249000","LOC_Os02g15090.1",{"$nulls":6},"PIKS","Pi-ks, Pi-s, Pik-s, Piks","PYRICULARIA ORYZAE RESISTANCE KS","Pyricularia oryzae resistance ks, Magnaporthe grisea resistance ks, Blast resistance ks",11," Tolerance and resistance - Disease resistance",{"$nulls":5},"Os05g0211100","Os08g0235800","Os06g0728000",1.95192,0,null,"YL1",null,"YELLOW LEAF 1","yellow leaf 1",2," Vegetative organ - Culm,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0009658 - chloroplast organization","TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000316 - photosynthetic ability, TO:0000346 - tiller number, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000592 - 1000-dehulled grain weight",null,"Os02g0152900","LOC_Os02g05890.1"]
[{"$nulls":24},"Os03g0198500","Os03g0336200","Os03g0336200",1.5530306,0,null,"Os04g0685400",3.6188076,"Os01g0734000",-1.2598414,{"$nulls":29},"ACBP6","OsACBP6","ACYL-COA-BINDING PROTEIN 6","Acyl-CoA-binding protein 6",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048364 - root development, GO:0006952 - defense response, GO:0006635 - fatty acid beta-oxidation, GO:0005777 - peroxisome, GO:0008289 - lipid binding, GO:0005829 - cytosol, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0000062 - acyl-CoA binding, GO:0006979 - response to oxidative stress","TO:0000604 - fat and essential oil content, TO:0000655 - leaf development trait, TO:0000605 - hydrogen peroxide content, TO:0002657 - oxidative stress, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease, TO:0000656 - root development trait, TO:0000135 - leaf length, TO:0000734 - grain length","PO:0009005 - root , PO:0007520 - root development stage , PO:0025034 - leaf ","Os03g0835600","LOC_Os03g61930.4, LOC_Os03g61930.1, LOC_Os03g61930.2, LOC_Os03g61930.3",{"$nulls":7},"_","PH12, PH-12, phasiPH12-1","_","PH12 precursor, PH12 precursor lncRNA, PH12 lncRNA, PH12 long non-coding RNA, phasiPH12-1 phasiRNA, phasiPH12-1 phased small interfering RNA",null," Reproductive organ - Inflorescence,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0010229 - inflorescence development, GO:0016246 - RNA interference, GO:0005737 - cytoplasm, GO:0009908 - flower development, GO:0035194 - posttranscriptional gene silencing by RNA","TO:0000622 - flower development trait, TO:0000621 - inflorescence development trait","PO:0006327 - spikelet meristem , PO:0001083 - inflorescence development stage , PO:0025277 - pollen sac , PO:0009029 - stamen , PO:0007615 - flower development stage , PO:0000230 - inflorescence meristem ",{"$nulls":8},"ERF72","OsEREBP, OsERF#072, OsERF072, OsERF72, AP2/EREBP#064, AP2/EREBP64, BIERF1, OsBIERF1, OsEBP2","ETHYLENE RESPONSE FACTOR 72","ethylene-responsive element-binding protein, ethylene response factor 72, benzothiadiazole (BTH)-induced ethylene responsive transcriptional factor 1, benzothiadiazole-induced ethylene responsive transcriptional factor 1, BTH-induced ERF transcriptional factor 1, APETALA2/ethylene-responsive element binding protein 64, ethylene-responsive-element binding protein2",9," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0009620 - response to fungus","TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000620 - embryo development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait",null,"Os09g0434500","LOC_Os09g26420.1, LOC_Os09g26420.2, LOC_Os09g26420.4, LOC_Os09g26420.5",{"$nulls":6},"XA33","Xa33","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 33 ","Xanthomonas oryzae pv. oryzae resistance 33, Xanthomonas campestris pv. oryzae resistance-33, Xanthomonas oryzae pv. oryzae resistance-33, Xanthomonas resistance 33",7," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",{"$nulls":3},"Os01g0915200","Os04g0563900","Os01g0617900",1.9336725,0,null,"ARE1","OsARE1","ABNORMAL CYTOKININ RESPONSE 1-1 REPRESSOR 1","abnormal cytokinin response 1-1 repressor1, abnormal cytokinin response 1-1 repressor 1, abc1-1 repressor 1",8," Character as QTL - Yield and productivity","GO:0006808 - regulation of nitrogen utilization, GO:0010150 - leaf senescence, GO:0009507 - chloroplast, GO:0048573 - photoperiodism, flowering, GO:0016021 - integral to membrane","TO:0000249 - leaf senescence, TO:0000137 - days to heading, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0001054 - 4 leaf senescence stage , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os08g0224300","LOC_Os08g12780.1, LOC_Os08g12780.2, LOC_Os08g12780.3, LOC_Os08g12780.4, LOC_Os08g12780.5"]
[{"$nulls":24},"Os12g0132800","Os03g0408500","Os03g0408500",-1.0486989,0,null,"Os12g0583500",3.617342,"Os06g0109400",-1.259514,{"$nulls":29},"OFP1","OsOFP1, OsOFP01","OVATE FAMILY PROTEIN 1","OVATE family protein 1, OVATE-domain containing protein 1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape","GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0010373 - negative regulation of gibberellin biosynthetic process","TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0002730 - grain shape, TO:0000207 - plant height","PO:0009039 - glume ","Os01g0226700","LOC_Os01g12690.1",{"$nulls":7},"SEU","OsSEU, OsSEU1, SEU1","SEUSS","OsSEUSS, OsSEUSS 1, SEUSS 1",11," Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os11g0207000","LOC_Os11g10060.1",{"$nulls":6},"GL1D","OsMyb3, OSMYB3, MYB3, OsGL1D, OsMYB46, MYB46, Kala3, OsKala3","GLABRA 1D","myb transcription factor 3, transcription factor MYB3, GLABRA1D, Key gene for black coloration by anthocyanin accumulation on chromosome 3",3," Coloration - Anthocyanin,  Seed - Morphological traits,  Other","GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0003677 - DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000707 - pericarp color, TO:0000071 - anthocyanin content",null,"Os03g0410000","LOC_Os03g29614.1",{"$nulls":6},"BSR1","OsRLCK278, RLCK278, PTK15, OsPTK15","BROAD-SPECTRUM RESISTANCE 1","Receptor-like Cytoplasmic Kinase 278, Protein Tyrosine Kinase 15",9," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0006970 - response to osmotic stress","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance","PO:0009030 - carpel , PO:0009066 - anther , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os09g0533600","LOC_Os09g36320.1","Os02g0137800","Os05g0553000","Os06g0194900",1.9279588,0,null,"LAIR",null,"LRK ANTISENSE INTERGENIC RNA","LRK Antisense Intergenic RNA, Long noncoding RNA LAIR",2," Character as QTL - Yield and productivity,  Other","GO:0016570 - histone modification, GO:0016571 - histone methylation, GO:0043984 - histone H4-K16 acetylation, GO:0016569 - covalent chromatin modification, GO:0010468 - regulation of gene expression","TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0006032 - panicle size",null,"Os02g0154100"]
[{"$nulls":24},"Os01g0962700","Os03g0411100","Os03g0411100",2.044784,0,null,"Os01g0719300",3.612622,"Os01g0860800",-1.2594973,{"$nulls":29},"OFP2","OsOFP2, OsOFP03","OVATE FAMILY PROTEIN 2","OVATE family protein 2, ovate family protein 3, OVATE-domain containing protein 3",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits","GO:0001944 - vasculature development, GO:0005634 - nucleus, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009809 - lignin biosynthetic process, GO:0005829 - cytosol, GO:0003700 - transcription factor activity, GO:0042445 - hormone metabolic process, GO:0009741 - response to brassinosteroid stimulus","TO:0002637 - leaf size, TO:0000207 - plant height, TO:0000484 - seed shape, TO:0002677 - brassinosteroid sensitivity, TO:0000492 - leaf shape, TO:0002675 - gibberellic acid content, TO:0000731 - lignin content","PO:0005052 - plant callus ","Os01g0625900","LOC_Os01g43610.1",{"$nulls":7},"RAE2 ","OsEPFL1, EPFL1, GAD1, OsGAD1, OsRAE2, GLA, OsGLA, GAD1/RAE2","REGULATOR OF AWN ELONGATION 2 ","EPIDERMAL PATTERNING FACTOR-LIKE 1, Regulator of Awn Elongation 2, \\GRAIN NUMBER, GRAIN LENGTH AND AWN DEVELOPMENT1\\\", Grain Length and Awn Development\"",8," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010052 - guard cell differentiation","TO:0000072 - awn length, TO:0002734 - awn presence, TO:0002759 - grain number, TO:0000734 - grain length, TO:0002656 - starch grain shape, TO:0000266 - chalky endosperm, TO:0000162 - seed quality",null,"Os08g0485500 ","LOC_Os08g37890.1",{"$nulls":6},"GS2","OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2, GS2/GL2, LGS1, OsLGS1","GRAIN SIZE 2","growth-regulating factor4, Growth-Regulating Factor 4, GRAIN SIZE ON CHROMOSOME 2, PANICLE TRAITS 2, grain length and width 2, Large Grain Size 1",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009755 - hormone-mediated signaling, GO:0009409 - response to cold, GO:0030307 - positive regulation of cell growth, GO:0030308 - negative regulation of cell growth, GO:0080006 - internode patterning, GO:0040008 - regulation of growth, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0009739 - response to gibberellin stimulus, GO:0051302 - regulation of cell division, GO:0002213 - defense response to insect, GO:0051781 - positive regulation of cell division, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0051510 - regulation of unidimensional cell growth","TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000653 - seed development trait, TO:0000271 - inflorescence length, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000473 - grain shattering, TO:0000734 - grain length, TO:0000621 - inflorescence development trait, TO:0000166 - gibberellic acid sensitivity, TO:0000382 - 1000-seed weight, TO:0000424 - brown planthopper resistance, TO:0000040 - panicle length, TO:0000303 - cold tolerance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000402 - grain width, TO:0000074 - blast disease, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0701300","LOC_Os02g47280.2, LOC_Os02g47280.1",{"$nulls":6},"PI47","Pi47, Pi47(t)","PYRICULARIA ORYZAE RESISTANCE 47 ",null,11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os05g0496400","Os05g0162500","Os02g0218600",1.9261684,0,null,"TGW3","GL3.3, OsSK41, SK41, OsGSK5, GSK5, qTGW3, OsTGW3, OsGSK5/OsSK41, OsSK41/OsGSK5, GL3.3/TGW3","THOUSAND GRAIN WEIGHT 3","GSK3/SHAGGY-Like Kinase 41, QTL FOR THOUSAND GRAIN WEIGHT ON CHROMOSOME 3, GSK3-like Kinase 5, Glycogen Synthase Kinase-like 5, thousand grain weight 3",3," Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010233 - phloem transport, GO:0009651 - response to salt stress, GO:0005982 - starch metabolic process, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0005975 - carbohydrate metabolic process, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010928 - regulation of auxin mediated signaling pathway","TO:0000397 - grain size, TO:0000175 - bacterial blight disease resistance, TO:0000696 - starch content, TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0000653 - seed development trait, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000391 - seed size","PO:0009005 - root , PO:0001170 - seed development stage ","Os03g0841800","LOC_Os03g62500.1"]
[{"$nulls":24},"Os02g0729400","Os03g0591300","Os03g0591300",4.875519,0,null,"Os07g0253000",3.6109161,"Os08g0431800",-1.2593833,{"$nulls":29},"OFP3","OsOFP3, OsOFP04, OFP4","OVATE FAMILY PROTEIN 3","OVATE family protein 3, ovate family protein 4, OVATE-domain containing protein 4",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape","GO:0005737 - cytoplasm, GO:0009826 - unidimensional cell growth, GO:0005634 - nucleus, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0000206 - leaf angle","PO:0020142 - stem internode , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009049 - inflorescence ","Os01g0732300","LOC_Os01g53160.1",{"$nulls":7},"RAE3",null,"REGULATOR OF AWN ELONGATION  3","Regulator of Awn Elongation 3",null," Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000072 - awn length, TO:0002734 - awn presence",{"$nulls":9},"GRF6","OsGRF6","GROWTH-REGULATING FACTOR 6","growth-regulating factor6, GROWTH REGULATING FACTOR 6",3," Biochemical character,  Vegetative organ - Culm,  Seed,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0051510 - regulation of unidimensional cell growth, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus","TO:0000653 - seed development trait, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000240 - sterile lemma length, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000074 - blast disease, TO:0000620 - embryo development trait","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0009009 - plant embryo ","Os03g0729500","LOC_Os03g51970.1",{"$nulls":6},"PI48","Pi48, Pi48(t)","PYRICULARIA ORYZAE RESISTANCE 48 ",null,12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":4},"Os11g0134700","Os10g0548200","Os01g0507000",1.9223205,0,null,"_","MEG2, OsMEG2","_","Maternally Expressed Gene2",7," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000146 - seed length, TO:0000149 - seed width, TO:0000304 - seed thickness, TO:0000382 - 1000-seed weight, TO:0000064 - embryo related trait, TO:0000696 - starch content","PO:0001170 - seed development stage ","Os07g0296900","LOC_Os07g20110.1"]
[{"$nulls":24},"Os06g0499500","Os03g0696300","Os03g0696300",1.9703779,0,null,"Os05g0355300",3.6020825,"Os07g0694700",-1.2588414,{"$nulls":29},"OFP4","OsOFP4, OsOFP06, OsOFP6, OFP6","OVATE FAMILY PROTEIN 4","OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009834 - secondary cell wall biogenesis, GO:0030244 - cellulose biosynthetic process, GO:0009809 - lignin biosynthetic process, GO:0045492 - xylan biosynthetic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009926 - auxin polar transport, GO:0048527 - lateral root development, GO:0010311 - lateral root formation, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0005634 - nucleus","TO:0002730 - grain shape, TO:0001013 - lateral root number, TO:0000605 - hydrogen peroxide content, TO:0000303 - cold tolerance, TO:0000346 - tiller number, TO:0000731 - lignin content, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0001012 - lateral root length","PO:0009039 - glume ","Os01g0823500","LOC_Os01g60810.1",{"$nulls":7},"_","UPF3","_","Nonsense-mediated decay UPF3",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0000166 - nucleotide binding, GO:0048653 - anther development",null,"PO:0001004 - anther development stage ","Os04g0440100","LOC_Os04g35920.2",{"$nulls":6},"GRF8","OsGRF8","GROWTH-REGULATING FACTOR 8","growth-regulating factor8",11," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0009733 - response to auxin stimulus, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0002213 - defense response to insect, GO:0009741 - response to brassinosteroid stimulus, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009739 - response to gibberellin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0016563 - transcription activator activity","TO:0000074 - blast disease, TO:0000166 - gibberellic acid sensitivity, TO:0000397 - grain size, TO:0002655 - starch grain size, TO:0002677 - brassinosteroid sensitivity, TO:0000424 - brown planthopper resistance, TO:0000290 - flavonoid content, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000163 - auxin sensitivity","PO:0009049 - inflorescence , PO:0009009 - plant embryo ","Os11g0551900","LOC_Os11g35030.2, LOC_Os11g35030.1",{"$nulls":6},"RYMV2","OsCPR5-1, CPR5-1, OsRYMV2","RESISTANCE TO YELLOW MOTTLE 2","constitutive expresser of pathogenesisrelated genes 5-1",1," Tolerance and resistance - Disease resistance","GO:0051607 - defense response to virus, GO:0031348 - negative regulation of defense response","TO:0000088 - rice yellow mottle virus resistance",null,"Os01g0918500 ","LOC_Os01g68970.3, LOC_Os01g68970.1, LOC_Os01g68970.2","Os03g0389100","Os02g0787500","Os02g0467000",1.9195677,0,null,"_","OsSK23/OsGSK4, OsSK23, OsGSK4, SK23, GSK4, OsGSK3, GSK3","_","GSK3/SHAGGY-Like Kinase 23, GSK3-like Kinase 4",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0005524 - ATP binding","TO:0002688 - leaf lamina joint bending, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000346 - tiller number",null,"Os02g0236200","LOC_Os02g14130.1"]
[{"$nulls":24},"Os06g0664200","Os03g0720800","Os03g0720800",1.1475669,0,null,"Os01g0224300",3.5996716,"Os04g0487300",-1.2585107,{"$nulls":29},"_","OsOFP13, OsOFP19, OFP13, OFP19","_","OVATE family protein 13, ovate family protein 19, OVATE-domain containing protein 19",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root","GO:0005634 - nucleus, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus","TO:0000207 - plant height, TO:0000258 - leaf thickness, TO:0000051 - stem strength","PO:0020033 - coleoptile ","Os05g0324600","LOC_Os05g25910.1",{"$nulls":7},"FTIP7","OsFTIP7","FT-INTERACTING PROTEIN 7",null,5," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009734 - auxin mediated signaling pathway, GO:0009901 - anther dehiscence, GO:0009555 - pollen development, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane","TO:0000437 - male sterility, TO:0000180 - spikelet fertility","PO:0001035 - G anther dehiscence stage , PO:0009066 - anther , PO:0001007 - pollen development stage ","Os05g0370600","LOC_Os05g30750.1, LOC_Os05g30750.2, LOC_Os05g30750.3, LOC_Os05g30750.4, LOC_Os05g30750.5, LOC_Os05g30750.6, LOC_Os05g30750.7",{"$nulls":6},"GRF9","OsGRF9","GROWTH-REGULATING FACTOR 9","growth-regulating factor9",3," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0050832 - defense response to fungus, GO:0010029 - regulation of seed germination, GO:0009741 - response to brassinosteroid stimulus, GO:0016563 - transcription activator activity, GO:0009733 - response to auxin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000163 - auxin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000074 - blast disease","PO:0007057 - 0 seed germination stage , PO:0009049 - inflorescence , PO:0009009 - plant embryo ","Os03g0674700","LOC_Os03g47140.1",{"$nulls":6},"WFP","OsSPL14, SPL14, IPA1, WFP/IPA1, OsSPL14/WFP/IPA1, OsIPA1, IPA1/OsSPL14","WEALTHY FARMER'S PANICLE","IDEAL PLANT ARCHITECTURE 1, Ideal Plant Architecture 1, Ideal Plant Architecture1, Squamosa promoter-binding-like protein 14, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14, Squamosa promoter binding protein like-14, IDEAL PLANT ARCHITECTURE1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0010050 - vegetative phase change, GO:0006350 - transcription, GO:0009607 - response to biotic stimulus, GO:0010187 - negative regulation of seed germination, GO:0005982 - starch metabolic process, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0048366 - leaf development, GO:0003677 - DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0045449 - regulation of transcription, GO:0009755 - hormone-mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process","TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000017 - anatomy and morphology related trait, TO:0000547 - primary branch number, TO:0000357 - growth and development trait, TO:0000011 - nitrogen sensitivity, TO:0002689 - leaf sheath length, TO:0000621 - inflorescence development trait, TO:0000340 - total soluble sugar content, TO:0000653 - seed development trait, TO:0000179 - biotic stress trait, TO:0000447 - filled grain number, TO:0000166 - gibberellic acid sensitivity, TO:0000346 - tiller number, TO:0002675 - gibberellic acid content, TO:0000455 - seed set percent, TO:0000175 - bacterial blight disease resistance, TO:0000152 - panicle number, TO:0000135 - leaf length, TO:0002759 - grain number","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007057 - 0 seed germination stage ","Os08g0509600","LOC_Os08g39890.1","Os05g0471000","Os01g0711400","Os11g0264300",1.918526,0,null,"CD",null,"CLUSTER AND DWARF ","cluster and dwarf",8," Vegetative organ - Culm,  Character as QTL - Yield and productivity",null,"TO:0000346 - tiller number, TO:0000207 - plant height"]
[{"$nulls":24},"Os01g0875000","Os03g0734900","Os03g0734900",1.0555553,0,null,"Os12g0236600",3.5993903,"Os01g0127900",-1.2574978,{"$nulls":29},"_","OsOFP30, OsOFP08, OsOFP8, OFP8, OFP30","_","OVATE family protein 30, ovate family protein 8, OVATE-domain containing protein 8",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0005737 - cytoplasm, GO:0040008 - regulation of growth, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009742 - brassinosteroid mediated signaling","TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending","PO:0005052 - plant callus ","Os01g0864000","LOC_Os01g64430.1",{"$nulls":7},"DTM1","OsDTM1","DEFECTIVE TAPETUM AND MEIOCYTES 1",null,7," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005789 - endoplasmic reticulum membrane, GO:0006996 - organelle organization, GO:0007029 - endoplasmic reticulum organization, GO:0048653 - anther development, GO:0016021 - integral to membrane, GO:0005787 - signal peptidase complex, GO:0009751 - response to salicylic acid stimulus, GO:0009408 - response to heat, GO:0008233 - peptidase activity, GO:0048658 - tapetal layer development, GO:0009555 - pollen development, GO:0006465 - signal peptide processing","TO:0000259 - heat tolerance, TO:0006007 - polysaccharide content, TO:0000437 - male sterility","PO:0001004 - anther development stage , PO:0025545 - anther wall tapetum cell , PO:0000002 - anther wall ","Os07g0622900","LOC_Os07g43010.1",{"$nulls":6},"GRF5","OsGRF5","GROWTH-REGULATING FACTOR 5","growth-regulating factor5",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed,  Tolerance and resistance - Disease resistance,  Other","GO:0009739 - response to gibberellin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016563 - transcription activator activity","TO:0000074 - blast disease, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000653 - seed development trait","PO:0000025 - root tip , PO:0000037 - shoot apex , PO:0009009 - plant embryo ","Os06g0116200","LOC_Os06g02560.3, LOC_Os06g02560.2, LOC_Os06g02560.1",{"$nulls":6},"XA34","xa34(t)","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 34",null,1," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os06g0289900","Os01g0877500","Os03g0146100",1.9125477,0,null,"_","ZnF5, OrZnF5","_","zinc-finger protein 5",7," Character as QTL - Yield and productivity",null,"TO:0000449 - grain yield per plant, TO:0000567 - tiller angle, TO:0000447 - filled grain number, TO:0000346 - tiller number"]
[{"$nulls":24},"Os01g0192000","Os03g0809200","Os03g0809200",0.95577973,0,null,"Os12g0111600",3.5982368,"Os01g0356400",-1.2572275,{"$nulls":29},"2ODD2","FLS, 2-ODD2, Os2-ODD2, Os2ODD2, OsF3H, F3H, F3H2, OsF3H2, OsF3H03g, F3H03g","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 2","flavonol synthase, 2-oxoglutarate-dependent dioxygenase 2, flavanone 3-hydroxylase",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0009863 - salicylic acid mediated signaling pathway, GO:0042742 - defense response to bacterium, GO:0009718 - anthocyanin biosynthetic process, GO:0009411 - response to UV, GO:0009617 - response to bacterium, GO:0009620 - response to fungus, GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0002213 - defense response to insect, GO:0051213 - dioxygenase activity, GO:0046872 - metal ion binding","TO:0000424 - brown planthopper resistance, TO:0000290 - flavonoid content, TO:0000160 - UV light sensitivity, TO:0000326 - leaf color, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os03g0122300","LOC_Os03g03034.5, LOC_Os03g03034.4, LOC_Os03g03034.3, LOC_Os03g03034.2, LOC_Os03g03034.1",{"$nulls":7},"MS188","OsMYB80, MYB80, OsMS188","MALE STERILE 188","MYB80 transcription factor, male-sterile 188",4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080110 - sporopollenin biosynthetic process, GO:0043565 - sequence-specific DNA binding, GO:0030154 - cell differentiation, GO:0048658 - tapetal layer development, GO:0048653 - anther development, GO:0051321 - meiotic cell cycle, GO:0009555 - pollen development, GO:0010208 - pollen wall assembly, GO:0005634 - nucleus","TO:0000437 - male sterility, TO:0000421 - pollen fertility, TO:0000214 - anther shape, TO:0000531 - anther length","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0009066 - anther , PO:0006204 - sporocyte , PO:0025543 - tapetum cell ","Os04g0470600","LOC_Os04g39470.1",{"$nulls":6},"GLP8-4","OsGLP8-4, GER1. OsGer1","GERMIN-LIKE PROTEIN 8-4","Germin-like protein 8-4, germin-like protein 1",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0048046 - apoplast, GO:0045735 - nutrient reservoir activity, GO:0030145 - manganese ion binding, GO:0009651 - response to salt stress, GO:0009607 - response to biotic stimulus","TO:0006001 - salt tolerance, TO:0000179 - biotic stress trait, TO:0000276 - drought tolerance","PO:0009010 - seed ","Os08g0189300","LOC_Os08g08980.1",{"$nulls":6},"XA35",null,"XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 35",null,11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os01g0823500","Os05g0154600","Os06g0217300",1.9053074,0,null,"_","ZnF7, OrZnF7","_","zinc-finger protein 7",7," Character as QTL - Yield and productivity",null,"TO:0000346 - tiller number, TO:0000449 - grain yield per plant, TO:0000567 - tiller angle, TO:0000447 - filled grain number"]
[{"$nulls":24},"Os02g0247100","Os04g0398000","Os04g0398000",-2.758197,0,null,"Os12g0131400",3.5947373,"Os08g0139000",-1.2559347,{"$nulls":29},"AO","ao","ACCERELATED INTERNODE OVERGROWTH","accerelated overgrowth of internode (Awa-odori), accerelated overgrowth of internode",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development","TO:0000370 - leaf width, TO:0000145 - internode length, TO:0000089 - panicle type, TO:0000152 - panicle number, TO:0000135 - leaf length","PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0020142 - stem internode ",{"$nulls":9},"_","OsSTA147, STA147","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",{"$nulls":8},"GLP8-10","OsGLP8-10, OsRGLP2, RGLP2","GERMIN-LIKE PROTEIN 8-10","Germin-like protein 8-10",8," Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0034059 - response to anoxia, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0002242 - defense response to parasitic plant, GO:0048316 - seed development, GO:0002213 - defense response to insect, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding, GO:0050832 - defense response to fungus","TO:0000439 - fungal disease resistance, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000315 - bacterial disease resistance, TO:0000424 - brown planthopper resistance, TO:0000303 - cold tolerance, TO:0000444 - parasitic weed, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000015 - oxygen sensitivity","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009010 - seed ","Os08g0189900","LOC_Os08g09060.1",{"$nulls":6},"XA36",null,"XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 36",null,11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os03g0687700","Os04g0507950","Os04g0684500",1.9033203,0,null,"_","ZnF8, OrZnF8","_","zinc-finger protein 8",7," Character as QTL - Yield and productivity",null,"TO:0000449 - grain yield per plant, TO:0000447 - filled grain number, TO:0000567 - tiller angle, TO:0000346 - tiller number"]
[{"$nulls":24},"Os04g0457000","Os04g0416100","Os04g0416100",1.1144319,0,null,"Os03g0861100",3.5939598,"Os04g0470300",-1.254253,{"$nulls":29},"BC6","Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9, BC88, SDBC1, OsSDBC1","BRITTLE CULM 6","Brittle culm6, Brittle culm 6, Brittle culm-6, Cellulose synthase A catalytic subunit 9 [UDP-forming], Cellulose synthase A catalytic subunit 9, semi-dominant brittle culm 1",9," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005515 - protein binding, GO:0009651 - response to salt stress, GO:0052324 - cell wall cellulose biosynthetic process, GO:0016021 - integral to membrane, GO:0031225 - anchored to membrane, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0010410 - hemicellulose metabolic process, GO:0016020 - membrane, GO:0006950 - response to stress, GO:0007047 - cell wall organization, GO:0009834 - secondary cell wall biogenesis, GO:0009808 - lignin metabolic process, GO:0009610 - response to symbiotic fungus, GO:0008270 - zinc ion binding, GO:0005886 - plasma membrane, GO:0009642 - response to light intensity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009531 - secondary cell wall, GO:0048573 - photoperiodism, flowering, GO:0009409 - response to cold, GO:0030244 - cellulose biosynthetic process, GO:0016760 - cellulose synthase (UDP-forming) activity","TO:0000051 - stem strength, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0000061 - node shattering, TO:0000608 - sodium content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000333 - sugar content, TO:0006001 - salt tolerance, TO:0000227 - root length, TO:0000207 - plant height, TO:0000557 - secondary branch number, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0000168 - abiotic stress trait, TO:0000108 - leaf shattering","PO:0009047 - stem , PO:0025025 - root system , PO:0009049 - inflorescence , PO:0009025 - vascular leaf ","Os09g0422500 ","LOC_Os09g25490.1",{"$nulls":7},"ARP6","OsARP6","ACTIN RELATED PROTEIN 6",null,1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009910 - negative regulation of flower development, GO:0080006 - internode patterning, GO:0051726 - regulation of cell cycle, GO:0009266 - response to temperature stimulus, GO:0006970 - response to osmotic stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006952 - defense response, GO:0006338 - chromatin remodeling, GO:0008283 - cell proliferation, GO:0006950 - response to stress, GO:0005634 - nucleus, GO:0010431 - seed maturation, GO:0048316 - seed development","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000495 - chlorophyll content, TO:0000657 - spikelet anatomy and morphology trait, TO:0000485 - sterility related trait, TO:0002768 - spikelet length, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000346 - tiller number, TO:0000639 - seed fertility","PO:0009010 - seed , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0009005 - root ","Os01g0269900","LOC_Os01g16414.1, LOC_Os01g16414.4, LOC_Os01g16414.3, LOC_Os01g16414.2",{"$nulls":6},"GLP12-4","OsGLP12-4","GERMIN-LIKE PROTEIN 12-4",null,12," Seed - Physiological traits - Storage substances","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0045735 - nutrient reservoir activity, GO:0030145 - manganese ion binding, GO:0048046 - apoplast",null,null,"Os12g0155000","LOC_Os12g05880.1",{"$nulls":6},"XA37",null,"\tXANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 37",null,null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":4},"Os02g0134200","Os07g0185000","Os07g0658300",1.8980641,0,null,"_",null,"_",null,1," Reproductive organ - Heading date,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0048573 - photoperiodism, flowering","TO:0000485 - sterility related trait, TO:0000137 - days to heading, TO:0000346 - tiller number",null,"Os01g0886000  ","LOC_Os01g66280.1"]
[{"$nulls":24},"Os10g0109300","Os04g0566600","Os04g0566600",-1.6942984,0,null,"Os04g0412200",3.5931473,"Os03g0120400",-1.2539253,{"$nulls":29},"D12","d12(d50), dwf11, d50, d12, d32, F71, DMT9","DWARF YUKARA DWARF OR FUKEI 71","yukara dwarf or fukei 71 dwarf, dwarf-12, DWARF50",2," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0009832 - plant-type cell wall biogenesis, GO:0009266 - response to temperature stimulus","TO:0000576 - stem length, TO:0000068 - lodging incidence, TO:0000145 - internode length, TO:0000432 - temperature response trait, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000124 - flag leaf angle","PO:0009047 - stem ","Os02g0477700","LOC_Os02g27620.1, LOC_Os02g27620.2",{"$nulls":7},"_","OsSTA171","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0186000","LOC_Os06g08680.1",{"$nulls":6},"_","OsCBSCBS4, OsCBSCBS4a, OsCBSCBS4b, OsCBSCBS4c, OsCBSCBS4d, OsCBSCBS4e","_","cystathionine b-synthase domain containing protein OsCBSCBS4, CBS domain containing protein OsCBSCBS4",4," Biochemical character,  Seed","GO:0008152 - metabolic process, GO:0003824 - catalytic activity","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os04g0401300","LOC_Os04g32880.1, LOC_Os04g32880.2, LOC_Os04g32880.3, LOC_Os04g32880.4, LOC_Os04g32880.5",{"$nulls":6},"G1L5","OsG1L5, TAW1, OsTAW1","G1 LIKE PROTEIN 5","TAWAWA1",10," Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009742 - brassinosteroid mediated signaling, GO:0007275 - multicellular organismal development, GO:0009299 - mRNA transcription, GO:0009416 - response to light stimulus, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0009005 - root , PO:0005052 - plant callus ","Os10g0478000","LOC_Os10g33780.1",null,"Os03g0193000","Os02g0548700",1.888311,0,null,"_",null,"_",null,1," Character as QTL - Yield and productivity",null,"TO:0000346 - tiller number",null,"Os01g0931600     ","LOC_Os01g70590.1"]
[{"$nulls":24},"Os03g0243900","Os04g0572200","Os04g0572200",3.3637822,0,null,"Os06g0506200",3.5916395,"Os12g0515600",-1.2538137,{"$nulls":29},"D13","d13, dwf12","DWARF SHORT GRAINED","short grained dwarf, dwarf-13",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000342 - panicle axis angle, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000089 - panicle type","PO:0009010 - seed , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"NPY2 ","OsNPY2","NAKED PINS IN YUC MUTANT 2",null,3," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0004672 - protein kinase activity, GO:0006468 - protein amino acid phosphorylation, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0009908 - flower development","TO:0000346 - tiller number",null,"Os06g0184500","LOC_Os06g08550.1",{"$nulls":6},"NAC10","ONAC010, ONAC10, OsSTA199, OsNAC3, NAC3","NAC DOMAIN-CONTAINING PROTEIN 10","NAC domain-containing protein 010, Grain Protein Content 2 homolog, GPC-B2 homolog, NAC domain-containing protein 10",7," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000386 - rice ragged stunt virus resistance","PO:0009066 - anther ","Os07g0566500","LOC_Os07g37920.1",{"$nulls":6},"XA38","Xa38","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 38","Xanthomonas oryzae pv. oryzae resistance 38",4," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium",{"$nulls":5},"Os07g0694000","Os03g0858800",1.8806342,0,null,"ACOT ","OsACOT","ACYL-COA THIOESTERASE","Acyl-CoA thioesterase",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0047617 - acyl-CoA hydrolase activity, GO:0005777 - peroxisome, GO:0019217 - regulation of fatty acid metabolic process","TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000149 - seed width, TO:0000304 - seed thickness, TO:0000397 - grain size, TO:0002759 - grain number, TO:0002667 - abscisic acid content, TO:0002672 - auxin content, TO:0000592 - 1000-dehulled grain weight, TO:0000396 - grain yield","PO:0009005 - root , PO:0009010 - seed ","Os04g0436100","LOC_Os04g35590.1"]
[{"$nulls":24},"Os04g0477500","Os04g0637000","Os04g0637000",-1.9526091,0,null,"Os09g0544700",3.5887353,"Os04g0602300",-1.2535847,{"$nulls":29},"D19","d19(t), dwf16, d19","DWARF KAMIKAWA","kamikawa dwarf, dwarf-19",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000576 - stem length, TO:0000089 - panicle type","PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"FLA","UBP4-5, OsUBP4-5, OsUBP5, UBP5, OsFLA","FLOWER AND LEAF COLOR ABERRANT","ubiquitin-specific processing protease 4-5, flower and leaf color aberrant, Ubiquitin-specific protease 5",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0048437 - floral organ development, GO:0048439 - flower morphogenesis, GO:0009658 - chloroplast organization, GO:0009908 - flower development, GO:0004843 - ubiquitin-specific protease activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0009555 - pollen development, GO:0016579 - protein deubiquitination","TO:0000072 - awn length, TO:0000495 - chlorophyll content, TO:0000622 - flower development trait, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000455 - seed set percent, TO:0000209 - palea number, TO:0000734 - grain length, TO:0000614 - lemma shape","PO:0025060 - lamina , PO:0007615 - flower development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009038 - palea , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os11g0473200","LOC_Os11g28360.1",{"$nulls":6},"SH1","YAB2, OsYAB2, OsSh1, Sh1, OsFIL2, OsSH1, Osh1","SHATTERING1","YABBY2, YABBY 2, OsYABBY2, Os YABBY2, Shattering1, Shattering 1, FIL homolog 2",3," Seed - Physiological traits - Shattering,  Other","GO:0046872 - metal ion binding, GO:0005634 - nucleus",null,null,"Os03g0650000","LOC_Os03g44710.3, LOC_Os03g44710.2, LOC_Os03g44710.1",{"$nulls":6},"DRO1","Dro1, OsDRO1, OsSPR1, SPR1, DRO1/OsNGR3, OsNGR3, NGR3","DEEPER ROOTING 1","Deeper rooting 1, Short postembryonic roots 1",9," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Root activity","GO:0034059 - response to anoxia, GO:0009414 - response to water deprivation, GO:0048364 - root development, GO:0009629 - response to gravity","TO:0002693 - gravity response trait, TO:0000656 - root development trait, TO:0000043 - root anatomy and morphology trait, TO:0000153 - relative yield, TO:0000276 - drought tolerance","PO:0006085 - root meristem , PO:0007520 - root development stage ","Os09g0439800","LOC_Os09g26840.1",null,"Os03g0713600","Os05g0494100",1.8778964,0,null,"SAC1","OsSAC1","SUGAR ACCUMULATION 1","sugar accumulation 1",7," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0005783 - endoplasmic reticulum, GO:0016021 - integral to membrane","TO:0000207 - plant height, TO:0001015 - photosynthetic rate, TO:0000328 - sucrose content, TO:0000696 - starch content, TO:0000557 - secondary branch number, TO:0000495 - chlorophyll content, TO:0000300 - glucose content, TO:0000339 - stem thickness, TO:0000333 - sugar content, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000326 - leaf color, TO:0000547 - primary branch number, TO:0000180 - spikelet fertility","PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os07g0116300","LOC_Os07g02520.1"]
[{"$nulls":24},"Os07g0105600","Os04g0662900","Os04g0662900",1.424017,0,null,"Os04g0221000",3.585294,"Os10g0578200",-1.2528273,{"$nulls":29},"D22","d22(t), dwf19, d22","DWARF JOKEI 6549","jokei 6549 dwarf, dwarf-22",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000391 - seed size, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000089 - panicle type","PO:0009010 - seed , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"PDS1","OsPDS1","PANICLE EXSERTION DEFECT AND ABERRANT SPIKELET 1","panicle exsertion defect and aberrant spikelet 1",8," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048623 - seed germination on parent plant, GO:0009826 - unidimensional cell growth","TO:0000240 - sterile lemma length, TO:0000165 - panicle exsertion, TO:0000657 - spikelet anatomy and morphology trait, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000619 - vivipary",null,"Os08g0155800","LOC_Os08g05950.1",{"$nulls":6},"CHI3","gh1, GH1, OsGH1, OsCHI, Cfi, CHI, OsCHI3","CHALCONE ISOMERASE 3","gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase, chalcone-flavonone isomerase",3," Biochemical character,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009813 - flavonoid biosynthetic process, GO:0048316 - seed development, GO:0045430 - chalcone isomerase activity, GO:0009411 - response to UV, GO:0009718 - anthocyanin biosynthetic process, GO:0009628 - response to abiotic stimulus, GO:0009809 - lignin biosynthetic process, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0009416 - response to light stimulus","TO:0000731 - lignin content, TO:0000396 - grain yield, TO:0000494 - pigment content, TO:0000534 - culm color, TO:0000653 - seed development trait, TO:0000075 - light sensitivity, TO:0000707 - pericarp color, TO:0000071 - anthocyanin content, TO:0000160 - UV light sensitivity, TO:0000051 - stem strength, TO:0000424 - brown planthopper resistance, TO:0000675 - ferulic acid content, TO:0000290 - flavonoid content, TO:0000733 - lignin biosynthesis trait, TO:0000168 - abiotic stress trait","PO:0025034 - leaf , PO:0001170 - seed development stage ","Os03g0819600","LOC_Os03g60509.2, LOC_Os03g60509.1",{"$nulls":6},"PI46","Pi46(t)","PYRICULARIA ORYZAE RESISTANCE 46 ","Magnaporthe grisea resistance 46, Blast resistance 46",4," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os01g0172400","Os05g0244700",1.8530831,0,null,"LG1","OsLG1, OsUBP15, UBP15, OsUBP15/LG1, OsUBP7-1, UBP7-1","LARGE GRAIN 1","large grain1, large grain 1, ubiquitin-specific protease15, ubiquitin-specific processing protease 7-1",null," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0008285 - negative regulation of cell proliferation","TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000149 - seed width","PO:0009029 - stamen ","Os02g0244300","LOC_Os02g14730.1"]
[{"$nulls":24},"Os08g0522500","Os05g0140100","Os05g0140100",4.1362944,0,null,"Os05g0593900",3.5845559,"Os07g0671200",-1.2524633,{"$nulls":29},"D23","d23(t), dwf20, d23","DWARF AH-7","ah-7 dwarf, dwarf-23",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000339 - stem thickness, TO:0000132 - basal internode diameter, TO:0000576 - stem length","PO:0005005 - shoot internode , PO:0009047 - stem ",{"$nulls":9},"DES4","OsDES4","DECREASED SPIKELETS 4","Decreased Spikelets 4",2," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006974 - response to DNA damage stimulus, GO:0005634 - nucleus, GO:0009933 - meristem structural organization, GO:0006281 - DNA repair","TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000456 - spikelet number","PO:0000232 - axillary bud meristem ","Os02g0782800",{"$nulls":7},"MIS2","OsCR4, CR4, OsMIS2","MINI SEED 2","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog",3," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0051302 - regulation of cell division, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0001558 - regulation of cell growth, GO:0005768 - endosome","TO:0000399 - grain thickness, TO:0000240 - sterile lemma length, TO:0002730 - grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006022 - floral organ development trait, TO:0000621 - inflorescence development trait, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os03g0637800","LOC_Os03g43670.1",{"$nulls":6},"GBSSII","GBSS2, OsGBSSII, OsGBSS2","GRANULE BOUND STARCH SYNTHASE II","Granule-bound starch synthase Ib, Granule-bound starch synthase II",7," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005982 - starch metabolic process, GO:0009408 - response to heat, GO:0009011 - starch synthase activity, GO:0004373 - glycogen (starch) synthase activity, GO:0019252 - starch biosynthetic process, GO:0010229 - inflorescence development","TO:0000259 - heat tolerance, TO:0000621 - inflorescence development trait","PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0001083 - inflorescence development stage ","Os07g0412100","LOC_Os07g22930.4, LOC_Os07g22930.3, LOC_Os07g22930.2",null,"Os04g0578400","Os06g0125800",1.8523716,0,null,"WLS5","OsWLS5","WEAKNESS AND LEAF SENESCENCE 5","weakness and leaf senescence5",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0008283 - cell proliferation, GO:0009826 - unidimensional cell growth, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling","TO:0000040 - panicle length, TO:0002675 - gibberellic acid content, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000566 - stomatal frequency, TO:0000495 - chlorophyll content, TO:0000371 - yield trait, TO:0002715 - chloroplast development trait, TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os05g0141050","LOC_Os05g04900.1"]
[{"$nulls":24},"Os05g0426800","Os05g0195700","Os05g0195700",2.2782562,0,null,"Os05g0215000",3.5815887,"Os03g0327100",-1.2523727,{"$nulls":29},"D24","d24(t), dwf21, d24","DWARF M-7","m-7 dwarf, dwarf-24",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000132 - basal internode diameter, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000361 - stem anatomy and morphology trait","PO:0005005 - shoot internode , PO:0009047 - stem ",{"$nulls":9},"NAL8","OsNAL8","NARROW LEAF 8","narrow leaf 8",7," Vegetative organ - Leaf,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009658 - chloroplast organization, GO:0043457 - regulation of cellular respiration, GO:0010109 - regulation of photosynthesis, GO:0010229 - inflorescence development, GO:0007005 - mitochondrion organization, GO:0051302 - regulation of cell division, GO:0048366 - leaf development, GO:0005743 - mitochondrial inner membrane, GO:0033484 - nitric oxide homeostasis, GO:0009755 - hormone-mediated signaling","TO:0000456 - spikelet number, TO:0000621 - inflorescence development trait, TO:0002660 - cytokinin content, TO:0000370 - leaf width","PO:0001083 - inflorescence development stage ","Os07g0262200","LOC_Os07g15880.1",{"$nulls":6},"SHAT1","SHAT1, AP2/EREBP#043, AP2/EREBP43, AP2-5, DLN124, OsDLN124","SHATTERING ABORTION 1","SHATTERING ABORTION1, shattering abortion 1, APETALA2/ethylene-responsive element binding protein 43, APETALA2-5, DLN repressor 124, DLN motif protein 124",4," Seed - Physiological traits - Shattering","GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity",null,null,"Os04g0649100","LOC_Os04g55560.4, LOC_Os04g55560.3, LOC_Os04g55560.2",{"$nulls":6},"CRL4","OsGNOM1, GNOM1, CRL4/GNOM1, CRL2/CRL3","CROWN ROOTLESS 4","crown rootless4",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009826 - unidimensional cell growth, GO:0009942 - longitudinal axis specification, GO:0010087 - phloem or xylem histogenesis, GO:0000911 - cytokinesis by cell plate formation, GO:0010540 - basipetal auxin transport, GO:0016192 - vesicle-mediated transport, GO:0034059 - response to anoxia, GO:0080119 - ER body organization, GO:0048765 - root hair cell differentiation, GO:0010292 - GTP:GDP antiporter activity, GO:0032012 - regulation of ARF protein signal transduction, GO:0001736 - establishment of planar polarity, GO:0005086 - ARF guanyl-nucleotide exchange factor activity, GO:0005802 - trans-Golgi network, GO:0007155 - cell adhesion",null,null,"Os03g0666100","LOC_Os03g46330.1",null,"Os09g0565200","Os04g0585200",1.8477923,0,null,"_","SPL24","_","spotted leaf 24, spotted-leaf 24",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic,  Character as QTL - Yield and productivity","GO:0009863 - salicylic acid mediated signaling pathway, GO:0012501 - programmed cell death, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000316 - photosynthetic ability, TO:0000180 - spikelet fertility, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000496 - carotenoid content, TO:0000293 - chlorophyll-a content, TO:0000346 - tiller number, TO:0000249 - leaf senescence, TO:0000325 - soluble protein content, TO:0000063 - mimic response, TO:0000592 - 1000-dehulled grain weight, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000295 - chlorophyll-b content","PO:0001054 - 4 leaf senescence stage "]
[{"$nulls":24},"Os12g0210200","Os05g0196500","Os05g0196500",0.96040744,0,null,"Os02g0805250",3.5810926,"Os09g0533600",-1.25211,{"$nulls":29},"D35","d35, d35(t), dwf30, OsKOL2, KOL2, KO2, OsKO2, OSKO2, KO, CYP701A, CYP701A6, Os KO2, OsKOL2/CYP701A","DWARF TANGINBOZU","tanginbozu dwarf, Tan-Ginbozu, dwarf-35, ent-kaurene oxidase2, cytochrome P450 701A6",6," Biochemical character,  Vegetative organ - Culm","GO:0009055 - electron carrier activity, GO:0009686 - gibberellin biosynthetic process, GO:0010241 - ent-kaurene oxidase activity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0022900 - electron transport chain, GO:0032940 - secretion by cell, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020122 - inflorescence axis , PO:0020039 - leaf lamina , PO:0020104 - leaf sheath ","Os06g0570100","LOC_Os06g37364.1, LOC_Os06g37364.2, LOC_Os06g37364.3",{"$nulls":7},"NSG1","OsNSG1","NONSTOP GLUMES1","nonstop glumes 1",4," Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0003676 - nucleic acid binding","TO:0000621 - inflorescence development trait, TO:0002727 - sterile lemma width, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0006009 - lodicule anatomy and morphology trait, TO:0000240 - sterile lemma length, TO:0020033 - glume length","PO:0009051 - spikelet , PO:0025127 - primordium , PO:0001083 - inflorescence development stage ","Os04g0444100","LOC_Os04g36650.1",{"$nulls":6},"IAA3","OsIAA3","_","Aux/IAA protein 3",1," Seed - Morphological traits - Grain shape","GO:0009734 - auxin mediated signaling pathway, GO:0009733 - response to auxin stimulus","TO:0000163 - auxin sensitivity, TO:0000734 - grain length",null,"Os01g0231000 ","LOC_Os01g13030.2, LOC_Os01g13030.1",{"$nulls":6},"PUL","OsPUL, SDBE, OsPUL3, RE","PULLULANASE","R-enzyme, starch debranching enzyme",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005975 - carbohydrate metabolic process, GO:0004556 - alpha-amylase activity, GO:0009413 - response to flooding, GO:0051060 - pullulanase activity","TO:0000286 - submergence sensitivity","PO:0009089 - endosperm ","Os04g0164900",null,null,"Os01g0757200","Os03g0165900",1.8444786,0,null,"FLA","UBP4-5, OsUBP4-5, OsUBP5, UBP5, OsFLA","FLOWER AND LEAF COLOR ABERRANT","ubiquitin-specific processing protease 4-5, flower and leaf color aberrant, Ubiquitin-specific protease 5",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0048437 - floral organ development, GO:0048439 - flower morphogenesis, GO:0009658 - chloroplast organization, GO:0009908 - flower development, GO:0004843 - ubiquitin-specific protease activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0009555 - pollen development, GO:0016579 - protein deubiquitination","TO:0000072 - awn length, TO:0000495 - chlorophyll content, TO:0000622 - flower development trait, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000455 - seed set percent, TO:0000209 - palea number, TO:0000734 - grain length, TO:0000614 - lemma shape","PO:0025060 - lamina , PO:0007615 - flower development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009038 - palea , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os11g0473200","LOC_Os11g28360.1"]
[{"$nulls":24},"Os05g0390100","Os05g0442100","Os05g0442100",-1.0624853,0,null,"Os05g0561400",3.5784638,"Os03g0136500",-1.2506031,{"$nulls":29},"D49","d49(t)","DWARF REIMEI","reimei dwarf",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height",{"$nulls":10},"FPFL4","OsFPFL4","FPF1-LIKE PROTEIN 4","FPF1-like protein 4, FPF1-like 4, flowering-promoting factor 1-like 4",4," Vegetative organ - Root,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0048653 - anther development, GO:0009408 - response to heat, GO:0009555 - pollen development, GO:0048573 - photoperiodism, flowering, GO:0010600 - regulation of auxin biosynthetic process, GO:0048364 - root development, GO:0009909 - regulation of flower development, GO:0009733 - response to auxin stimulus, GO:0006970 - response to osmotic stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold","TO:0000656 - root development trait, TO:0002672 - auxin content, TO:0001013 - lateral root number, TO:0001006 - adventitious root number, TO:0002616 - flowering time, TO:0000163 - auxin sensitivity, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0000605 - hydrogen peroxide content","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0007520 - root development stage ","Os04g0282400","LOC_Os04g21350.2, LOC_Os04g21350.1",{"$nulls":6},"PLT3","OsPLT3, AP2/EREBP#018, AP2/EREBP18, BBM2, OsBBM2","PLETHORA 3","Plethora 3, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 18, BABY BOOM2, BABY BOOM 2",2," Seed - Morphological traits - Embryo,  Other","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009790 - embryonic development, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding","TO:0000345 - seed viability","PO:0000423 - plant zygote ","Os02g0614300","LOC_Os02g40070.1",{"$nulls":6},"RSR1","AP2/EREBP#090, AP2/EREBP90, OsTOE1, TOE1, qHD5, AP2-1, AP2/EREBP/RSR1, OsRSR1, DLN130, DLN130a, DLN130b, OsDLN130, OsDLN130a, OsDLN130b","RICE STRACH REGULATOR 1","AP2/EREBP family transcription factor, APETALA2/ethylene-responsive element binding protein 90, Rice Starch Regulator1, APETALA2-1, DLN repressor 130, DLN motif protein 130",5," Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process, GO:0010228 - vegetative to reproductive phase transition, GO:0010077 - maintenance of inflorescence meristem identity, GO:0009887 - organ morphogenesis, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0048573 - photoperiodism, flowering, GO:0048437 - floral organ development","TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000137 - days to heading, TO:0000259 - heat tolerance, TO:0006032 - panicle size, TO:0006030 - spikelet meristem identity",null,"Os05g0121600","LOC_Os05g03040.3, LOC_Os05g03040.2, LOC_Os05g03040.1",null,"Os05g0176700","Os03g0268400",1.8376017,0,null,"PPA6","OsPPa6, PPa6","INORGANIC PYROPHOSPHATASE 6","soluble inorganic pyrophosphatase 6, inorganic pyrophosphatase 6, PPase 6, sPPase 6, pyrophosphorylase 6",2," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010446 - response to alkalinity, GO:0006796 - phosphate metabolic process, GO:0000287 - magnesium ion binding, GO:0004427 - inorganic diphosphatase activity, GO:0006970 - response to osmotic stress, GO:0005737 - cytoplasm","TO:0000328 - sucrose content, TO:0000481 - alkali sensitivity, TO:0001027 - net photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000696 - starch content, TO:0006002 - proline content, TO:0000333 - sugar content, TO:0000525 - sodium to potassium content ratio, TO:0000095 - osmotic response sensitivity, TO:0002673 - amino acid content, TO:0000207 - plant height, TO:0000143 - relative biomass, TO:0000442 - plant fresh weight, TO:0000180 - spikelet fertility, TO:0000396 - grain yield, TO:0002627 - fruit width",null,"Os02g0768600","LOC_Os02g52940.3, LOC_Os02g52940.2, LOC_Os02g52940.1"]
[{"$nulls":24},"Os11g0621400","Os05g0488600","Os05g0488600",3.074873,0,null,"Os01g0273100",3.576719,"Os07g0572500",-1.2502189,{"$nulls":29},"D59","d59(t), dwf40, d59","DWARF DM107-4","dwarf (DM107-4), dwarf-59",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000068 - lodging incidence","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA131","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0576300","LOC_Os04g48700.1",{"$nulls":6},"PLT5","OsPLT5, AP2/EREBP5, AP2/EREBP#005, BBM3, OsBBM3, BBM1, OsBBM1","PLETHORA 5","Plethora 5, APETALA2/ethylene-responsive element binding protein 5, BABY BOOM3, BABY BOOM 3",1," Seed - Morphological traits - Embryo,  Other","GO:0009790 - embryonic development, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding","TO:0000345 - seed viability, TO:0000428 - callus induction","PO:0000423 - plant zygote ","Os01g0899800","LOC_Os01g67410.1",{"$nulls":6},"BGLU13","OsTAGG1, TAGG1, Os4BGlu13, 4BGlu13","BETA-GLUCOSIDASE 13","beta-glucosidase 13, tuberonic acid glucoside beta-glucosidase 1, tuberonic acid glucoside hydrolyzing beta-glucosidase 1",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008422 - beta-glucosidase activity, GO:0005975 - carbohydrate metabolic process",null,null,"Os04g0474900","LOC_Os04g39900.1",null,"Os06g0190500","Os09g0438000",1.8222518,0,null,"GS2","OsGS2, OsGS","GLUTATHIONE SYNTHETASE 2","glutathione synthetase 2, hydroxymethyl-glutathione synthetase",12," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042803 - protein homodimerization activity, GO:0045454 - cell redox homeostasis, GO:0000287 - magnesium ion binding, GO:0004363 - glutathione synthase activity, GO:0005524 - ATP binding, GO:0043295 - glutathione binding, GO:0009409 - response to cold, GO:0048527 - lateral root development","TO:0000656 - root development trait, TO:0000303 - cold tolerance, TO:0000605 - hydrogen peroxide content, TO:0000396 - grain yield, TO:0001012 - lateral root length, TO:0000279 - root weight, TO:0000227 - root length","PO:0007520 - root development stage , PO:0009006 - shoot system ","Os12g0263000","LOC_Os12g16200.1"]
[{"$nulls":24},"Os02g0623500","Os05g0494100","Os05g0494100",1.8778964,0,null,"Os02g0601700",3.5738506,"Os01g0845100",-1.2485908,{"$nulls":29},"DW2","dw2(fh2), dw2, fh2, FH2, OsFH2","DEEP WATER TOLERANCE 2","deep water tolerance2, deep water tolerance-2, Formin-like protein 2, formin homology 2, forming family protein 2, FH2 protein 2, FH2 domain protein 2",4," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0030036 - actin cytoskeleton organization, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009413 - response to flooding, GO:0003779 - actin binding","TO:0000103 - deepwater stress, TO:0000170 - elongation ability","PO:0000003 - whole plant ","Os04g0461800","LOC_Os04g38810.1",{"$nulls":7},"_","OsSTA132","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0620600","LOC_Os04g52950.1",{"$nulls":6},"PLT6","OsPLT6, AP2/EREBP#118, AP2/EREBP118, BBM1, OsBBM1, OsBBML1, BBML1, OsASGR-BBML1, ASGR-BBML1","PLETHORA 6","Plethora 6, APETALA2/ethylene-responsive element binding protein 118, BABY BOOM1, BABY BOOM 1, Apospory-specific Genome Region-BABY-BOOM LIKE 1, BABY-BOOM LIKE 1",11," Seed - Morphological traits - Embryo,  Other","GO:0003700 - transcription factor activity, GO:0009566 - fertilization, GO:0010262 - somatic embryogenesis, GO:0006351 - transcription, DNA-dependent, GO:0051785 - positive regulation of nuclear division, GO:0051781 - positive regulation of cell division, GO:0019954 - asexual reproduction, GO:0003677 - DNA binding, GO:0009790 - embryonic development, GO:0005634 - nucleus","TO:0000345 - seed viability","PO:0000084 - plant sperm cell , PO:0000423 - plant zygote ","Os11g0295900","LOC_Os11g19060.1",{"$nulls":6},"PTR2","OsPTR2, OsNPF2.2, NPF2.2","PROTEIN TRANSPORTER 2","nitrate transporter 1/peptide transporter family 2.2, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 2.2",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0044464 - cell part, GO:0034059 - response to anoxia, GO:0015706 - nitrate transport, GO:0010167 - response to nitrate, GO:0005886 - plasma membrane, GO:0001944 - vasculature development",null,"PO:0000034 - vascular system ","Os12g0638200","LOC_Os12g44100.1",null,"Os03g0743900","Os02g0141100",1.8167738,0,null,"LC5","OsLC5, OsTTA, TTA","LOW CADMIUM 5","OsTITANIA, TITANIA",3," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0010071 - root meristem specification, GO:0010468 - regulation of gene expression, GO:0055065 - metal ion homeostasis, GO:0010492 - maintenance of shoot apical meristem identity, GO:0010078 - maintenance of root meristem identity, GO:0009880 - embryonic pattern specification, GO:0001708 - cell fate specification, GO:0046872 - metal ion binding, GO:0005634 - nucleus, GO:0040008 - regulation of growth","TO:0000207 - plant height, TO:0000346 - tiller number","PO:0000003 - whole plant ","Os03g0239200","LOC_Os03g13590.1"]
[{"$nulls":24},"Os07g0226200","Os05g0509900","Os05g0509900",-1.1832862,0,null,"Os12g0411700",3.5706432,"Os08g0100600",-1.2477055,{"$nulls":29},"DW3","dw3","DEEP WATER TOLERANCE 3","deep water tolerance3, deep water tolerance 3, deep water tolerance-3",null," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding","TO:0000170 - elongation ability, TO:0000103 - deepwater stress","PO:0000003 - whole plant ",{"$nulls":9},"_","OsSTA133","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0625700","LOC_Os04g53430.1",{"$nulls":6},"ERF35","OsERF#035, OsERF035, OsERF35, AP2/EREBP#148, AP2/EREBP148, OsAP211, ARAG1, OsARAG1","ETHYLENE RESPONSE FACTOR 35","ethylene response factor 35, APETALA2/ethylene-responsive element binding protein 148, AP2/EREBP-type\ntranscription factor OsAP211, ABA responsive AP2-like gene 1",2," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0006351 - transcription, DNA-dependent, GO:0009845 - seed germination, GO:0009414 - response to water deprivation, GO:0009738 - abscisic acid mediated signaling, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance","PO:0009010 - seed , PO:0009009 - plant embryo , PO:0009005 - root , PO:0009049 - inflorescence , PO:0007057 - 0 seed germination stage ","Os02g0657000","LOC_Os02g43970.1",{"$nulls":6},"PTR6","OsPTR6, OsNRT1;2, NRT1;2, OsNPF7.3, NPF7.3","PROTEIN TRANSPORTER 6","PTR/NRT1 transporter 6, nitrate transporter 1/peptide transporter family 7.3, PTR/NRT1 family 7.3, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 7.3",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016020 - membrane, GO:0015197 - peptide transporter activity, GO:0044270 - nitrogen compound catabolic process, GO:0045848 - positive regulation of nitrogen utilization, GO:0005774 - vacuolar membrane, GO:0010167 - response to nitrate, GO:0005215 - transporter activity","TO:0002673 - amino acid content, TO:0000447 - filled grain number, TO:0000152 - panicle number, TO:0000396 - grain yield, TO:0000346 - tiller number","PO:0020121 - lateral root , PO:0009047 - stem ","Os04g0597800","LOC_Os04g50950.1",null,"Os09g0267800","Os02g0817600",1.8155766,0,null,"GRF7","OsGRF7","GROWTH-REGULATING FACTOR 7","growth-regulating factor7",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0009683 - indoleacetic acid metabolic process, GO:0009739 - response to gibberellin stimulus, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009685 - gibberellin metabolic process, GO:0009845 - seed germination","TO:0000357 - growth and development trait, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000206 - leaf angle, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000476 - growth hormone content, TO:0002675 - gibberellic acid content, TO:0000396 - grain yield, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease","PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0009009 - plant embryo , PO:0005004 - shoot node , PO:0020142 - stem internode , PO:0007057 - 0 seed germination stage ","Os12g0484900","LOC_Os12g29980.2, LOC_Os12g29980.1"]
[{"$nulls":24},"Os11g0461200","Os05g0569300","Os05g0569300",1.0875634,0,null,"Os03g0346150",3.567796,"Os07g0129100",-1.2474929,{"$nulls":29},"EL","El*, El","FLOATING HABIT","Floating habit, Floating habit (elongation ability)",null," Vegetative organ - Culm","GO:0009685 - gibberellin metabolic process, GO:0009413 - response to flooding","TO:0000145 - internode length, TO:0000103 - deepwater stress, TO:0000170 - elongation ability","PO:0000003 - whole plant , PO:0005005 - shoot internode , PO:0009011 - plant structure ",{"$nulls":9},"_","OsSTA134","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0630600","LOC_Os04g53830.1",{"$nulls":6},"ERF61","OsERF#061, OsERF061, OsERF61, AP2/EREBP#093, AP2/EREBP93","ETHYLENE RESPONSE FACTOR 61","ethylene response factor 61, APETALA2/ethylene-responsive element binding protein 93",5," Seed,  Other","GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os05g0361700","LOC_Os05g29810.1",{"$nulls":6},"PPS","OsWD40-55, OsCOP1, COP1, YEL, OsYEL, OsPPS, COP1-1, OsCOP1-1","PETER PAN SYNDROME","COP1 ortholog, CONSTITUTIVE PHOTOMORPHOGENIC 1, yellowish-pericarp embryo lethal",2," Reproductive organ - Heading date,  Heterochrony,  Coloration - Others,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0048573 - photoperiodism, flowering, GO:0008270 - zinc ion binding, GO:0006281 - DNA repair, GO:0009416 - response to light stimulus, GO:0005634 - nucleus, GO:0009640 - photomorphogenesis, GO:0046283 - anthocyanin metabolic process, GO:0010228 - vegetative to reproductive phase transition, GO:0016874 - ligase activity, GO:0010119 - regulation of stomatal movement, GO:0009793 - embryonic development ending in seed dormancy, GO:0009962 - regulation of flavonoid biosynthetic process, GO:0009641 - shade avoidance, GO:0009266 - response to temperature stimulus, GO:0009628 - response to abiotic stimulus, GO:0046685 - response to arsenic","TO:0000326 - leaf color, TO:0000675 - ferulic acid content, TO:0006006 - monosaccharide content, TO:0000430 - germination rate, TO:0002616 - flowering time, TO:0000229 - photoperiod sensitivity, TO:0000432 - temperature response trait, TO:0000075 - light sensitivity, TO:0000051 - stem strength, TO:0006007 - polysaccharide content, TO:0000137 - days to heading, TO:0000168 - abiotic stress trait, TO:0000396 - grain yield, TO:0000707 - pericarp color, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000290 - flavonoid content, TO:0000064 - embryo related trait",null,"Os02g0771100","LOC_Os02g53140.1",null,"Os11g0148500","Os06g0142900",1.8118159,0,null,"SHI1","OsSHI1","SHORT INTERNODES1 ","SHORT INTERNODES 1",9," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0000276 - drought tolerance, TO:0000346 - tiller number, TO:0006032 - panicle size","PO:0009005 - root , PO:0004709 - axillary bud , PO:0009030 - carpel , PO:0009066 - anther , PO:0009006 - shoot system ","Os09g0531600","LOC_Os09g36160.1"]
[{"$nulls":24},"Os06g0132400","Os06g0108500","Os06g0108500",2.9161224,0,null,"Os03g0346200",3.567796,"Os06g0716700",-1.2462469,{"$nulls":29},"ESBA","Esba*, Esb1, Esba","EXTRA SCHLENCHYMATOUS BAND IN STEM A","Extra schlenchymatous band in stem-a, Extra schlenchymatous band in stem-1",null," Vegetative organ - Culm","GO:0030154 - cell differentiation","TO:0000361 - stem anatomy and morphology trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA135, STA135, OsODD21, ODD21, 2-ODD21, Os2-ODD21, Os2ODD21, M2H, OsM2H","_","2-oxoglutarate-dependent dioxygenase 21, Melatonin 2-Hydroxylase",4," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007623 - circadian rhythm, GO:0051213 - dioxygenase activity, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0010030 - positive regulation of seed germination, GO:0009648 - photoperiodism, GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0030186 - melatonin metabolic process, GO:0046686 - response to cadmium ion","TO:0000495 - chlorophyll content, TO:0010001 - percent germination, TO:0000654 - shoot development trait, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000467 - cell membrane stability, TO:0000605 - hydrogen peroxide content","PO:0009066 - anther , PO:0001054 - 4 leaf senescence stage ","Os04g0667400","LOC_Os04g57180.1",{"$nulls":6},"ERF62","OsERF#062, OsERF062, OsERF62, AP2/EREBP#125, AP2/EREBP125, AP2-125, OsLG3, LG3, OsLG3/OsAP2-125, OsAP2-125, WAP1, OsWAP1, OsSTAP1, STAP1, ERF1, OsERF1","ETHYLENE RESPONSE FACTOR 62","ethylene response factor 62, APETALA2/ethylene-responsive element binding protein 125, Wall-Associated regulator WAP1",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0055075 - potassium ion homeostasis, GO:0051238 - sequestering of metal ion, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0008284 - positive regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009736 - cytokinin mediated signaling, GO:0009873 - ethylene mediated signaling pathway, GO:0005634 - nucleus, GO:0006970 - response to osmotic stress, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0045454 - cell redox homeostasis, GO:0009723 - response to ethylene stimulus, GO:0009739 - response to gibberellin stimulus, GO:0055078 - sodium ion homeostasis, GO:0009409 - response to cold","TO:0000276 - drought tolerance, TO:0000167 - cytokinin sensitivity, TO:0000609 - potassium content, TO:0000608 - sodium content, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000166 - gibberellic acid sensitivity","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0009047 - stem ","Os03g0183000","LOC_Os03g08470.2, LOC_Os03g08470.1, LOC_Os03g08470.3",{"$nulls":6},"CCH","OsATX1, OsCCH, OsaCCH, ATX1, OsHMP14, HMP14","COPPER CHAPERONE HOMOLOG","Anti-oxidant 1, copper chaperone homolog CCH, Heavy metal-associated protein 14",2," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0009566 - fertilization, GO:0005634 - nucleus, GO:0006826 - iron ion transport, GO:0030001 - metal ion transport, GO:0046872 - metal ion binding, GO:0005507 - copper ion binding, GO:0010288 - response to lead ion, GO:0046688 - response to copper ion, GO:0010043 - response to zinc ion","TO:0000351 - zinc sensitivity, TO:0000021 - copper sensitivity",null,"Os02g0530100","LOC_Os02g32814.1",null,"Os06g0163000","Os02g0790500",1.8107771,0,null,"LSSR1","OsLSSR1","LOW SEED SETTING RATE1","LOW SEED SETTING RATE 1",2," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0009556 - microsporogenesis, GO:0005634 - nucleus, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0009860 - pollen tube growth, GO:0005975 - carbohydrate metabolic process, GO:0009566 - fertilization, GO:0009846 - pollen germination","TO:0000180 - spikelet fertility, TO:0000371 - yield trait, TO:0000455 - seed set percent","PO:0009066 - anther ","Os02g0596200","LOC_Os02g38260.1"]
[{"$nulls":24},"Os05g0454200","Os06g0205100","Os06g0205100",3.309496,0,null,"Os01g0905800",3.5656865,"Os05g0528200",-1.2454724,{"$nulls":29},"ESBB","Esbb*, Esb2, Esbb","EXTRA SCHLENCHYMATOUS BAND IN STEM B","Extra schlenchymatous band in stem-b, Extra schlenchymatous band in stem-2",null," Vegetative organ - Culm","GO:0030154 - cell differentiation","TO:0000361 - stem anatomy and morphology trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA136","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0677400","LOC_Os04g58100.1",{"$nulls":6},"ERF68","OsERF#068, OsERF068, OsERF68, AP2/EREBP#003, AP2/EREBP3, ERF2","ETHYLENE RESPONSE FACTOR 68","ethylene response factor 68, APETALA2/ethylene-responsive element binding protein 3, ethylene response factor 2",1," Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0001666 - response to hypoxia, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os01g0313300","LOC_Os01g21120.1",{"$nulls":6},"BRXL1","OsBRXL1","BREVIS RADIX-LIKE 1","Brevis radix-like 1, BRX-like 1",8," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os08g0462700","LOC_Os08g36020.1",null,"Os04g0442000","Os01g0710200",1.796678,0,null,"PDS1","OsPDS1","PANICLE EXSERTION DEFECT AND ABERRANT SPIKELET 1","panicle exsertion defect and aberrant spikelet 1",8," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048623 - seed germination on parent plant, GO:0009826 - unidimensional cell growth","TO:0000240 - sterile lemma length, TO:0000165 - panicle exsertion, TO:0000657 - spikelet anatomy and morphology trait, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000619 - vivipary",null,"Os08g0155800","LOC_Os08g05950.1"]
[{"$nulls":24},"Os12g0541300","Os07g0139500","Os07g0139500",-1.2581185,0,null,"Os03g0168000",3.5637474,"Os11g0174000",-1.2452122,{"$nulls":29},"FSC","Fsc*(Fc), Fc, Fsc","FUSCOID CELLS ATTACHED TO VASCULAR BUNDLES","Fuscoid cells attached to vascular bundles",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000361 - stem anatomy and morphology trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA137","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0680300","LOC_Os04g58380.1",{"$nulls":6},"ERF83","OsERF#083, OsERF083, OsERF83, AP2/EREBP#163, AP2/EREBP163","ETHYLENE RESPONSE FACTOR 83","ethylene response factor 83, APETALA2/ethylene-responsive element binding protein 163",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009607 - response to biotic stimulus","TO:0000040 - panicle length, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000179 - biotic stress trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000447 - filled grain number","PO:0009047 - stem , PO:0025034 - leaf , PO:0009005 - root , PO:0009015 - portion of vascular tissue ","Os03g0860100","LOC_Os03g64260.1",{"$nulls":6},"BRXL2","OsBRXL2","BREVIS RADIX-LIKE 2","Brevis radix-like 2, BRX-like 2",2," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os02g0700700","LOC_Os02g47230.1, LOC_Os02g47230.2",null,"Os01g0624700","Os07g0663800",1.7915686,0,null,"GASR9","OsGASR9","GIBBERELLIC ACID-STIMULATED RICE 9","gibberellic acid-stimulated rice 9",7," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009939 - positive regulation of gibberellic acid mediated signaling, GO:0005886 - plasma membrane, GO:0005737 - cytoplasm, GO:0009739 - response to gibberellin stimulus","TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity",null,"Os07g0592000","LOC_Os07g40240.1"]
[{"$nulls":24},"Os03g0158300","Os07g0443500","Os07g0443500",-3.1911008,0,null,"Os03g0364700",3.5615127,"Os01g0749300",-1.2446251,{"$nulls":29},"ND","Nd*, Nd","EARLY NODAL DIFFERENTIATION","Early nodal differentiation",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000103 - deepwater stress, TO:0000285 - nodal tillering","PO:0000003 - whole plant , PO:0005001 - basal axillary shoot system ",{"$nulls":9},"_","OsSTA138","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0124000","LOC_Os05g03320.1",{"$nulls":6},"ERF133","OsERF#133, OsERF133, AP2/EREBP#065, AP2/EREBP65, OsDREB1H, DREB1H, OsDREB1m, DREB1m","ETHYLENE RESPONSE FACTOR 133","ethylene response factor 133, APETALA2/ethylene-responsive element binding protein 65, Dehydration-responsive element-binding protein 1H",9," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0009409 - response to cold, GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0006950 - response to stress, GO:0009845 - seed germination, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance","PO:0007022 - seed imbibition stage ","Os09g0522100","LOC_Os09g35020.1",{"$nulls":6},"BRXL3","OsBRXL3","BREVIS RADIX-LIKE 3","Brevis radix-like 3, BRX-like 3",4," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os04g0600500","LOC_Os04g51172.1",null,"Os01g0134700","Os05g0499400",1.7880096,0,null,"PGSIP-A1","OsPGSIP-A1, OsGUX1, GUX1, OsGUX1L","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN A1","plant glycogenin-like starch initiation protein A1, xylan glucuronosyltransferase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045492 - xylan biosynthetic process, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0045491 - xylan metabolic process, GO:0052386 - cell wall thickening, GO:0005794 - Golgi apparatus, GO:0048366 - leaf development, GO:0016021 - integral to membrane","TO:0000300 - glucose content, TO:0000696 - starch content, TO:0006006 - monosaccharide content, TO:0000495 - chlorophyll content, TO:0000011 - nitrogen sensitivity, TO:0000655 - leaf development trait, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000051 - stem strength","PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os01g0880200","LOC_Os01g65780.4, LOC_Os01g65780.2, LOC_Os01g65780.1, LOC_Os01g65780.3"]
[{"$nulls":24},"Os07g0164200","Os07g0558100","Os07g0558100",-2.6159618,0,null,"Os01g0392600",3.560138,"Os07g0568600",-1.2445259,{"$nulls":29},"NR1","Nr1*, Nr1","NODAL ROOTING 1","Nodal rooting1, Nodal rooting 1, Nodal rooting-1",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000103 - deepwater stress, TO:0000404 - nodal rooting","PO:0000003 - whole plant , PO:0003005 - nodal root ",{"$nulls":9},"_","OsSTA139","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0149000","LOC_Os05g05640.1",{"$nulls":6},"NGR5","ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, RLA1, RLA1/SMOS1, OsERF142/SMOS1, OsNGR5","NITROGEN-MEDIATED TILLER GROWTH RESPONSE 5","ethylene response factor 142, APETALA2/ethylene-responsive element binding protein 49, small organ size1, small organ size 1, SHOEBOX, shoebox, reduced leaf angle1, reduced leaf angle 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0016049 - cell growth, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009845 - seed germination, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009755 - hormone-mediated signaling, GO:0009742 - brassinosteroid mediated signaling, GO:0000226 - microtubule cytoskeleton organization, GO:0006808 - regulation of nitrogen utilization","TO:0000163 - auxin sensitivity, TO:0002684 - plant cell size, TO:0001035 - stem width, TO:0002602 - pistil size, TO:0002601 - stamen size, TO:0000391 - seed size, TO:0000227 - root length, TO:0002637 - leaf size, TO:0000371 - yield trait, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0002677 - brassinosteroid sensitivity","PO:0007527 - 2 root meristem formation stage , PO:0006085 - root meristem , PO:0007057 - 0 seed germination stage ","Os05g0389000","LOC_Os05g32270.2, LOC_Os05g32270.1",{"$nulls":6},"BRXL4","OsBRXL4","BREVIS RADIX-LIKE 4","Brevis radix-like 4, BRX-like 4",3," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os03g0853500","LOC_Os03g63650.1",null,"Os03g0308800","Os03g0182800",1.7790432,0,null,"GBP","OsGBP","GBSS-BINDING PROTEIN",null,2," Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0019252 - starch biosynthetic process, GO:0009536 - plastid","TO:0000696 - starch content, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000196 - amylose content, TO:0000266 - chalky endosperm, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000097 - amylopectin content","PO:0025034 - leaf , PO:0009010 - seed ","Os02g0135900","LOC_Os02g04330.1, LOC_Os02g04330.2"]
[{"$nulls":24},"Os10g0493600","Os07g0579000","Os07g0579000",-1.5470341,0,null,"Os06g0329900",3.5589755,"Os03g0360300",-1.2434098,{"$nulls":29},"NR2","Nr2*, Nr2","NODAL ROOTING 2","Nodal rooting2, Nodal rooting 2, Nodal rooting-2",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000103 - deepwater stress, TO:0000404 - nodal rooting","PO:0000003 - whole plant ",{"$nulls":9},"_","OsSTA140","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0150100","LOC_Os05g05760.1",{"$nulls":6},"AP2/EREBP127","AP2/EREBP#127, OsRAV11, RAV11","APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 127","APETALA2/ethylene-responsive element binding protein 127, RAV transcription factor 11",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0048440 - carpel development, GO:0007623 - circadian rhythm, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0030912 - response to deep water","TO:0000524 - submergence tolerance, TO:0000391 - seed size","PO:0008039 - stem base , PO:0025034 - leaf , PO:0020148 - shoot apical meristem , PO:0009005 - root ","Os01g0693400","LOC_Os01g49830.1",{"$nulls":6},"BRXL5.P","OsBRXL5.P, OsBRXL5","BREVIS RADIX-LIKE 5 PSEUDOGENE","Brevis radix-like 5 pseudogene, BRX-like 5 pseudogene",12," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os12g0193000","LOC_Os12g09080.1",null,"Os03g0263400","Os02g0557800",1.7785755,0,null,"EF-CD","Ef-cd, OsEf-cd","EARLY FLOWERING-COMPLETELY DOMINANT","Early flowering-completely dominant",3," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0021700 - developmental maturation, GO:0048573 - photoperiodism, flowering, GO:0045848 - positive regulation of nitrogen utilization","TO:0002616 - flowering time, TO:0001027 - net photosynthetic rate, TO:0000469 - days to maturity, TO:0000137 - days to heading",null,"Os03g0122500"]
[{"$nulls":24},"Os12g0530100","Os07g0629000","Os07g0629000",1.3122288,0,null,"Os03g0233900",3.5551937,"Os08g0189900",-1.2424258,{"$nulls":29},"RCN3","rcn3","REDUCED CULM NUMBER 3","reduced culm number-3",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development, GO:0009266 - response to temperature stimulus","TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000152 - panicle number, TO:0000432 - temperature response trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA141","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0176300","LOC_Os05g08390.1",{"$nulls":6},"AP2/EREBP96","AP2/EREBP#096, OsRAV12, RAV12","APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 96","APETALA2/ethylene-responsive element binding protein 96, RAV transcription factor 12",5," Seed - Morphological traits - Grain shape,  Other","GO:0003700 - transcription factor activity, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0048440 - carpel development, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding","TO:0000391 - seed size","PO:0009005 - root , PO:0025034 - leaf ","Os05g0549800","LOC_Os05g47650.1",{"$nulls":6},"BRXL5","OsBRXL5","BREVIS RADIX-LIKE 5","Brevis radix-like 5",9," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus",null,null,"Os09g0444500","LOC_Os09g27220.1",null,"Os10g0524400","Os12g0468600",1.7705879,0,null,"GFR1","OsGFR1","GRAIN-FILLING RATE1","GRAIN-FILLING RATE 1",10," Coloration - Chlorophyll,  Character as QTL - Yield and productivity","GO:0016020 - membrane, GO:0009959 - negative gravitropism, GO:0009639 - response to red or far red light, GO:0019253 - reductive pentose-phosphate cycle, GO:0005856 - cytoskeleton, GO:0005777 - peroxisome","TO:0000295 - chlorophyll-b content, TO:0000396 - grain yield, TO:0000447 - filled grain number, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0000328 - sucrose content, TO:0000293 - chlorophyll-a content",null,"Os10g0508100","LOC_Os10g36400.1"]
[{"$nulls":24},"Os03g0279950","Os07g0636100","Os07g0636100",-0.9744868,0,null,"Os02g0652100",3.5550115,"Os11g0127951",-1.2405645,{"$nulls":29},"RCN4","rcn4","REDUCED CULM NUMBER 4","reduced culm number-4",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development, GO:0009266 - response to temperature stimulus, GO:0009826 - unidimensional cell growth","TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0000152 - panicle number, TO:0000346 - tiller number, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA142","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os05g20620",{"$nulls":6},"AP2/EREBP59","AP2/EREBP#059, AP2-4","APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 59","APETALA2/ethylene-responsive element binding protein 59, APETALA2-4",6," Seed - Morphological traits,  Other","GO:0003700 - transcription factor activity","TO:0000397 - grain size, TO:0000382 - 1000-seed weight",null,"Os06g0639200","LOC_Os06g43220.1",{"$nulls":6},"LRA1","OsPIN2, PIN2, OsLRA1","LARGE ROOT ANGLE1","PIN-FORMED 2, large root angle 1, AUXIN EFFLUX CARRIER COMPONENT 2-LIKE",6," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009733 - response to auxin stimulus, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0055085 - transmembrane transport, GO:0009415 - response to water, GO:0009734 - auxin mediated signaling pathway, GO:0009725 - response to hormone stimulus, GO:0005886 - plasma membrane, GO:0009926 - auxin polar transport, GO:0009629 - response to gravity, GO:0042594 - response to starvation","TO:0000043 - root anatomy and morphology trait, TO:0000237 - water stress trait, TO:0002693 - gravity response trait, TO:0000567 - tiller angle, TO:0000401 - plant growth hormone sensitivity, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity","PO:0025256 - lateral root elongation zone , PO:0004013 - epidermal cell , PO:0009005 - root , PO:0008039 - stem base , PO:0000016 - lateral root primordium ","Os06g0660200","LOC_Os06g44970.1",null,"Os01g0672400","Os07g0669700",1.7700906,0,null,"IQD14","OsIQD14","IQ67-DOMAIN14","IQ67-DOMAIN 14, IQD family protein 14",8," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0048316 - seed development, GO:0070507 - regulation of microtubule cytoskeleton organization, GO:0005874 - microtubule, GO:0051592 - response to calcium ion, GO:0009733 - response to auxin stimulus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000163 - auxin sensitivity, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000397 - grain size, TO:0002730 - grain shape","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0006000 - caryopsis hull , PO:0009051 - spikelet ","Os08g0115200","LOC_Os08g02250.1"]
[{"$nulls":24},"Os03g0277000","Os07g0688200","Os07g0688200",1.1499673,0,null,"Os01g0846500",3.5549147,"Os01g0730200",-1.2389661,{"$nulls":29},"RCN6","rcn6","REDUCED CULM NUMBER 6","reduced culm number-6",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000346 - tiller number, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA143, STA143","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0285900",{"$nulls":7},"WRI1-1","AP2/EREBP131, AP2/EREBP#131, OsWRI1-1","WRINKLED1-1","APETALA2/ethylene-responsive element binding protein 131, WRINKLED 1-1, WRI1 like protein 1-1",11," Seed,  Other","GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000653 - seed development trait, TO:0000620 - embryo development trait","PO:0000003 - whole plant ","Os11g0129700","LOC_Os11g03540.1",{"$nulls":6},"PIN10A","PIN3A, OsPIN3a, OsPIN3t, OsPIN10a, OsPIN3","PIN PROTEIN 10A","PIN PROTEIN 3A",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0055085 - transmembrane transport, GO:0009734 - auxin mediated signaling pathway, GO:0009737 - response to abscisic acid stimulus, GO:0042594 - response to starvation, GO:0046685 - response to arsenic, GO:0048830 - adventitious root development, GO:0016021 - integral to membrane","TO:0000578 - root fresh weight, TO:0000615 - abscisic acid sensitivity, TO:0000031 - silicon sensitivity, TO:0000084 - root number, TO:0001006 - adventitious root number","PO:0004013 - epidermal cell ","Os01g0643300","LOC_Os01g45550.3, LOC_Os01g45550.2, LOC_Os01g45550.1",null,"Os02g0749700","Os08g0155400",1.7667803,0,null,"SE14","JMJ701, Os JMJ701, Se14","PHOTOSENSITIVITY 14","Jumonji 701, Photoperiod-sensitivity-14",3," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0045814 - negative regulation of gene expression, epigenetic, GO:0009908 - flower development, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0035097 - histone methyltransferase complex, GO:0051213 - dioxygenase activity, GO:0032452 - histone demethylase activity, GO:0034647 - histone demethylase activity (H3-trimethyl-K4 specific), GO:0046872 - metal ion binding, GO:0003676 - nucleic acid binding, GO:0006338 - chromatin remodeling, GO:0005634 - nucleus, GO:0010114 - response to red light","TO:0000158 - red light sensitivity, TO:0000397 - grain size, TO:0000137 - days to heading","PO:0020103 - flag leaf , PO:0009047 - stem ","Os03g0151300","LOC_Os03g05690.1, LOC_Os03g05680.1"]
[{"$nulls":24},"Os03g0782200","Os08g0160300","Os08g0160300",1.3209658,0,null,"Os09g0243200",3.5495338,"Os03g0717900",-1.2383776,{"$nulls":29},"SD2","sd2","SEMIDWARF 2","semidwarf2 (CI11033), semidwarf 2, semidwarf-2",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA144, STA144","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os05g23560.1",{"$nulls":6},"MPK16","OsMPK16, OsMPK15, MPK15, OsMAPK16, MAPK16","MAP KINASE 16","MAP kinase 16",11," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0042742 - defense response to bacterium, GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031348 - negative regulation of defense response, GO:0009863 - salicylic acid mediated signaling pathway, GO:0005773 - vacuole, GO:0005886 - plasma membrane, GO:0000165 - MAPKKK cascade, GO:0050832 - defense response to fungus","TO:0000734 - grain length, TO:0000605 - hydrogen peroxide content, TO:0000172 - jasmonic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000396 - grain yield, TO:0000074 - blast disease, TO:0000391 - seed size, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility",null,"Os11g0271100","LOC_Os11g17080.3, LOC_Os11g17080.2, LOC_Os11g17080.1",{"$nulls":6},"PIN5A","OsPIN5a, OsPIN6","PIN PROTEIN 5A",null,1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0051607 - defense response to virus, GO:0009734 - auxin mediated signaling pathway, GO:0048830 - adventitious root development, GO:0046685 - response to arsenic, GO:0055085 - transmembrane transport","TO:0000020 - black streak dwarf virus resistance, TO:0000084 - root number, TO:0001006 - adventitious root number, TO:0000578 - root fresh weight, TO:0000031 - silicon sensitivity",null,"Os01g0919800","LOC_Os01g69070.1",null,"Os06g0152200","Os08g0468700",1.7622023,0,null,"PIP5K1","OsPIP5K1","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1","phosphatidylinositol-4-phosphate 5-kinase 1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity, GO:0016307 - phosphatidylinositol phosphate kinase activity, GO:0040008 - regulation of growth, GO:0019932 - second-messenger-mediated signaling, GO:0005634 - nucleus","TO:0000077 - shoot anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0000034 - vascular system , PO:0000017 - vascular leaf primordium , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os03g0705300","LOC_Os03g49800.1"]
[{"$nulls":24},"Os10g0564500","Os08g0490000","Os08g0490000",1.251965,0,null,"Os05g0555600",3.5486362,"Os01g0760400",-1.2372891,{"$nulls":29},"SD3","sd3","SEMIDWARF 3","semidwarf3 (CI9858), semidwarf 3, semidwarf-3",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA145, STA145","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0327000",{"$nulls":7},"CBE1","OsWD40-6, OsCBE1","CULLIN4-BASED E3 UBIQUITIN LIGASE 1","Cullin4-Based E3 ubiquitin ligase1",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0010029 - regulation of seed germination, GO:0009737 - response to abscisic acid stimulus","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0001016 - relative chlorophyll content, TO:0000152 - panicle number, TO:0000615 - abscisic acid sensitivity, TO:0002759 - grain number, TO:0000316 - photosynthetic ability",null,"Os01g0185400","LOC_Os01g09020.1",{"$nulls":6},"GRP1","OsGRP1","GLYCINE-RICH RNA-BINDING PROTEIN 1","glycine-rich RNA-binding protein 1",1," Tolerance and resistance - Stress tolerance","GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding",null,null,"Os01g0916600","LOC_Os01g68790.1, LOC_Os01g68790.2, LOC_Os01g68790.3, LOC_Os01g68790.4",null,"Os01g0783800","Os08g0135400",1.7598835,0,null,"RIP1.1","OsRIP1, RIP1, OsjRIP1.1","RIBOSOME-INACTIVATING PROTEIN 1.1","ribosome-inactivating protein 1, Ribosome-inactivating protein 1.1",1," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0045007 - depurination, GO:0000154 - rRNA modification, GO:0002213 - defense response to insect, GO:0009405 - pathogenesis, GO:0017148 - negative regulation of translation, GO:0006952 - defense response, GO:0030598 - rRNA N-glycosylase activity, GO:0005829 - cytosol, GO:0006970 - response to osmotic stress","TO:0000457 - total biomass yield, TO:0000424 - brown planthopper resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000227 - root length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance",null,"Os01g0160800","LOC_Os01g06740.1"]
[{"$nulls":24},"Os04g0659100","Os09g0431300","Os09g0431300",2.442088,0,null,"Os01g0151500",3.5394685,"Os04g0430600",-1.2369779,{"$nulls":29},"SD4","sd4","SEMIDWARF 4","semidwarf4 (CI11034), semidwarf 4, semidwarf-4",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000391 - seed size, TO:0000576 - stem length, TO:0000469 - days to maturity, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA148","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0382000","LOC_Os05g31720.1",{"$nulls":6},"_","OsWD40-17, OsLUGL, LUGL, KKX, OsKKX","_","LEUNIG-like transcriptional regulator, KAIKOUXIAO, LEUNIG-like, LEUNIG",1," Reproductive organ - panicle,  Seed - Morphological traits,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development, GO:0048449 - floral organ formation, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway","TO:0000485 - sterility related trait, TO:0000184 - seed anatomy and morphology trait, TO:0002672 - auxin content, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0006327 - spikelet meristem , PO:0025127 - primordium , PO:0025477 - floral organ primordium , PO:0000229 - flower meristem ","Os01g0607400","LOC_Os01g42260.4, LOC_Os01g42260.3, LOC_Os01g42260.2, LOC_Os01g42260.1",{"$nulls":6},"GRP2","OsGRP2","GLYCINE-RICH RNA-BINDING PROTEIN 2","glycine-rich RNA-binding protein 2",3," Tolerance and resistance - Stress tolerance","GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding",null,null,"Os03g0770100","LOC_Os03g56020.1",null,"Os01g0817700","Os03g0272300",1.7588023,0,null,"REY(K2)","OsPFKB1, PFKB1","REVERTIBLE EARLY YELLOWING KITAAKE 2","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0008443 - phosphofructokinase activity, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0019200 - carbohydrate kinase activity","TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os10g0573000","LOC_Os10g42240.2, LOC_Os10g42240.1"]
[{"$nulls":24},"Os05g0438600","Os09g0455300","Os09g0455300",2.4607484,0,null,"Os07g0599600",3.5392368,"Os06g0220800",-1.2363266,{"$nulls":29},"SD5","sd5","SEMIDWARF 5","semidwarf5 (Short Labelle), semidwarf 5, semidwarf-5",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000146 - seed length, TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"OSCA1.3","OsSTA149, OsOSCA1.3, OsIOSCA1.3, OsDDP5, DDP5, OsDDP5.1","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.3","Hyperosmolality-gated calcium-permeable channel 1.3, DUF221 Domain containing Protein 5, reduced hyperosmolality-induced Ca2+ increase 1.3",5," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0005783 - endoplasmic reticulum, GO:0006970 - response to osmotic stress","TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009066 - anther , PO:0000084 - plant sperm cell ","Os05g0393800","LOC_Os05g32720.1",{"$nulls":6},"CCS52B","OsWD40-33, WD40-33, OsCCS52B","CELL CYCLE SWITCH 52 B","cell cycle switch 52 B, cell cycle switch 52B, B-type cell cycle switch 52",1," Seed - Morphological traits","GO:0031145 - anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0010997 - anaphase-promoting complex binding, GO:0005680 - anaphase-promoting complex",null,null,"Os01g0972900","LOC_Os01g74146.1",{"$nulls":6},"GRP3","OsGRP3, RTP, RBP-152","GLYCINE-RICH RNA-BINDING PROTEIN 3","glycine-rich RNA-binding protein 3, ABA-inducible for glycine-rich protein, Retrotransposon protein, RNA-binding RBP-152, GLYCINE-RICH PROTEIN 3",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0043488 - regulation of mRNA stability, GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0042743 - hydrogen peroxide metabolic process, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0000166 - nucleotide binding, GO:0003676 - nucleic acid binding, GO:0005634 - nucleus","TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000074 - blast disease",null,"Os03g0670700","LOC_Os03g46770.1",null,"Os03g0844100","Os02g0626100",1.7492199,0,null,"DIM1","OsDim1","DEFECTIVE ENTRY INTO MITOSIS 1","Defective Entry into Mitosis 1",10," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0046540 - U4/U6 x U5 tri-snRNP complex, GO:0009860 - pollen tube growth, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0005682 - U5 snRNP","TO:0002667 - abscisic acid content, TO:0002672 - auxin content, TO:0000371 - yield trait, TO:0002660 - cytokinin content, TO:0002675 - gibberellic acid content, TO:0000227 - root length, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000476 - growth hormone content","PO:0025281 - pollen , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0007131 - seedling development stage , PO:0020110 - scutellum , PO:0009009 - plant embryo , PO:0009089 - endosperm , PO:0009005 - root , PO:0005004 - shoot node , PO:0020142 - stem internode , PO:0025395 - floral organ , PO:0025195 - pollen tube cell ","Os10g0486600","LOC_Os10g34520.1"]
[{"$nulls":24},"Os03g0106400","Os09g0474000","Os09g0474000",4.3198514,0,null,"Os02g0640500",3.5286038,"Os01g0145200",-1.2360886,{"$nulls":29},"SD6","sd6(t), sd6","SEMIDWARF 6","semidwarf6 (R34), semidwarf-6(R34), semidwarf-6, semidwarf 6",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000068 - lodging incidence, TO:0000139 - grains per panicle","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA150","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0443700","LOC_Os05g37150.2",{"$nulls":6},"TTG1A","OsWD40-50, OsTTG1A, OsTTG1, TTG1","TRANSPARENT TESTA GLABRA 1A","TRANSPARENT TESTA GLABRA1A",2," Coloration - Anthocyanin,  Seed - Morphological traits","GO:0010026 - trichome differentiation, GO:0032880 - regulation of protein localization, GO:0045165 - cell fate commitment, GO:0007275 - multicellular organismal development, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0006612 - protein targeting to membrane, GO:0010363 - regulation of plant-type hypersensitive response, GO:0009957 - epidermal cell fate specification, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000071 - anthocyanin content, TO:0000486 - seed color, TO:0000707 - pericarp color","PO:0007632 - seed maturation stage ","Os02g0682500","LOC_Os02g45810.1, LOC_Os02g45810.2",{"$nulls":6},"GRP4","OsGRP4","GLYCINE-RICH RNA-BINDING PROTEIN 4","glycine-rich RNA-binding protein 4",4," Tolerance and resistance - Stress tolerance","GO:0000166 - nucleotide binding, GO:0003676 - nucleic acid binding",null,null,"Os04g0414400","LOC_Os04g33810.1",null,"Os02g0796300","Os01g0124650",1.7413692,0,null,"NPF6.1","OsNPF6.1","NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 6.1","NRT1/PTR family protein 6.1",1," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0022857 - transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0015333 - peptide:hydrogen symporter activity, GO:0016021 - integral to membrane, GO:0006857 - oligopeptide transport, GO:0042128 - nitrate assimilation","TO:0000371 - yield trait, TO:0000011 - nitrogen sensitivity, TO:0001032 - relative panicle number",null,"Os01g0103100","LOC_Os01g01360.1"]
[{"$nulls":24},"Os01g0883800","Os09g0475400","Os09g0475400",1.5876045,0,null,"Os08g0483501",3.5256817,"Os11g0246100",-1.2360724,{"$nulls":29},"SD8","sd8(t), sd8","SEMIDWARF 8","semidwarf8 (AB60e'3), semidwarf-8(AB-60e'-3), semidwarf-8, semidwarf 8",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA151","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0451900","LOC_Os05g37880.1",{"$nulls":6},"RGB1","OsWD40-80, RGbeta1, OsRGB1","RICE G PROTEIN BETA SUBUNIT 1","heterotrimeric G protein beta 1 subunit, heterotrimeric G protein b-subunit 1, G protein beta subunit 1",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0048573 - photoperiodism, flowering, GO:0008219 - cell death, GO:0009887 - organ morphogenesis, GO:0048316 - seed development, GO:0010252 - auxin homeostasis, GO:0010600 - regulation of auxin biosynthetic process, GO:0009723 - response to ethylene stimulus, GO:0048367 - shoot development, GO:0010431 - seed maturation, GO:0004871 - signal transducer activity, GO:0005783 - endoplasmic reticulum, GO:0009651 - response to salt stress, GO:0048527 - lateral root development, GO:0009409 - response to cold, GO:0010581 - regulation of starch biosynthetic process, GO:0009817 - defense response to fungus, incompatible interaction, GO:0005985 - sucrose metabolic process, GO:0048364 - root development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009790 - embryonic development, GO:0010154 - fruit development, GO:0009845 - seed germination, GO:0080008 - CUL4 RING ubiquitin ligase complex, GO:0030968 - endoplasmic reticulum unfolded protein response","TO:0000357 - growth and development trait, TO:0000656 - root development trait, TO:0000620 - embryo development trait, TO:0002672 - auxin content, TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000430 - germination rate, TO:0000639 - seed fertility, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000152 - panicle number, TO:0000137 - days to heading, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000064 - embryo related trait","PO:0007631 - plant embryo stage , PO:0007131 - seedling development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0007632 - seed maturation stage , PO:0025527 - shoot system development stage ","Os03g0669200","LOC_Os03g46650.1",{"$nulls":6},"GRP5","OsGRP5","GLYCINE-RICH RNA-BINDING PROTEIN 5","glycine-rich RNA-binding protein 5",5," Tolerance and resistance - Stress tolerance","GO:0000166 - nucleotide binding, GO:0003676 - nucleic acid binding",null,null,"Os05g0223300","LOC_Os05g13630.1",null,"Os01g0874300","Os05g0518600",1.7397135,0,null,"LTT1","OsLTT1","LOW-TEMPERATURE TOLERANCE 1","low-temperature tolerance 1",10," Reproductive organ - Heading date,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0048573 - photoperiodism, flowering, GO:0009555 - pollen development, GO:0016021 - integral to membrane","TO:0000605 - hydrogen peroxide content, TO:0000455 - seed set percent, TO:0000303 - cold tolerance, TO:0000063 - mimic response, TO:0000137 - days to heading, TO:0000346 - tiller number","PO:0001007 - pollen development stage ","Os10g0482200","LOC_Os10g34110.1"]
[{"$nulls":24},"Os06g0537700","Os09g0501600","Os09g0501600",-1.4043883,0,null,"Os03g0145900",3.5251758,"Os09g0482100",-1.2360722,{"$nulls":29},"TSB","tsb, ts2","TWISTED STEM-B","twisted stem-b, twisted stem-2",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA152","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0463300","LOC_Os05g38790.1",{"$nulls":6},"DRW1","OsWD40-166, WD40-166, OsDRW1","DWARF-RELATED WD40 PROTEIN 1 ","dwarf-related wd40 protein 1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0045740 - positive regulation of DNA replication, GO:0006974 - response to DNA damage stimulus, GO:0070734 - histone H3-K27 methylation, GO:0010564 - regulation of cell cycle process, GO:0005634 - nucleus, GO:0045787 - positive regulation of cell cycle","TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000145 - internode length","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0006085 - root meristem , PO:0020148 - shoot apical meristem ","Os09g0241100","LOC_Os09g06560.1",{"$nulls":6},"GRP6","OsGRP6, GRRBP7","GLYCINE-RICH RNA-BINDING PROTEIN 6","glycine-rich RNA-binding protein 6, glycine-rich RNA-binding protein 7",12," Tolerance and resistance - Stress tolerance","GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding",null,null,"Os12g0502200","LOC_Os12g31800.1",null,"Os05g0437900","Os06g0340200",1.7374119,0,null,"RBG1","OsRBG1","RICE BIG GRAIN 1","Rice Big Grain 1",11," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0009408 - response to heat, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009628 - response to abiotic stimulus, GO:0080050 - regulation of seed development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress","TO:0000276 - drought tolerance, TO:0000168 - abiotic stress trait, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000656 - root development trait, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000227 - root length, TO:0000592 - 1000-dehulled grain weight, TO:0000146 - seed length, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000145 - internode length, TO:0000128 - harvest index","PO:0001170 - seed development stage , PO:0007518 - crown root emergence stage , PO:0007520 - root development stage , PO:0004010 - meristematic cell ","Os11g0497350","LOC_Os11g30430.1"]
[{"$nulls":24},"Os01g0788800","Os09g0516200","Os09g0516200",-1.7315491,0,null,"Os01g0326000",3.5228004,"Os04g0567800",-1.2354975,{"$nulls":29},"D18","d18-h  (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, OsGA3ox-2, GA3ox-2, GA3ox1","DWARF 18","hosetsu-waisei(d18-h), Akibare waisei(d18-AD), Waito-D(d18-dy), Kotaketamanishiki(d18-k), GA 3beta-hydroxylase2, GA 3beta-hydroxylase 2, GA 3-oxidase 2, Gibberellin(GA)-3 beta-hydroxylase-2",1," Biochemical character,  Vegetative organ - Culm","GO:0009628 - response to abiotic stimulus, GO:0009685 - gibberellin metabolic process, GO:0016707 - gibberellin 3-beta-dioxygenase activity, GO:0009742 - brassinosteroid mediated signaling, GO:0009826 - unidimensional cell growth, GO:0042446 - hormone biosynthetic process, GO:0009741 - response to brassinosteroid stimulus, GO:0009686 - gibberellin biosynthetic process, GO:0007275 - multicellular organismal development","TO:0000401 - plant growth hormone sensitivity, TO:0000499 - flower anatomy and morphology trait, TO:0000492 - leaf shape, TO:0002675 - gibberellic acid content, TO:0000166 - gibberellic acid sensitivity, TO:0000040 - panicle length, TO:0000299 - leaf lamina color, TO:0000576 - stem length, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity","PO:0009049 - inflorescence , PO:0009047 - stem , PO:0000003 - whole plant , PO:0009025 - vascular leaf , PO:0009046 - flower ","Os01g0177400","LOC_Os01g08220.1",{"$nulls":7},"_","OsSTA153","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0481700","LOC_Os05g40310.1",{"$nulls":6},"RLCK318","OsWD40-188, OsRLCK318","RECEPTOR-LIKE CYTOPLASMIC KINASE 318","Receptor-like Cytoplasmic Kinase 318",11," Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0005524 - ATP binding","TO:0000653 - seed development trait","PO:0009010 - seed , PO:0001170 - seed development stage ","Os11g0213000","LOC_Os11g10710.1",{"$nulls":6},"CLPB-C","ClpB-c, OsClpB-c","CLASS I CLP ATPASE B-C","class I Clp ATPase B-C, ClpB-chloroplastic, ClpB/Hsp100 chloroplastic isoform",3," Tolerance and resistance - Stress tolerance","GO:0019538 - protein metabolic process, GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0017111 - nucleoside-triphosphatase activity, GO:0005515 - protein binding",null,null,"Os03g0426900","LOC_Os03g31300.1",null,"Os08g0490000","Os06g0172800",1.7281188,0,null,"RBG1-L","OsRBG1-L","RBG1-LIKE","RBG1-like",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000397 - grain size, TO:0000146 - seed length, TO:0000590 - grain weight",null,"Os01g0922100","LOC_Os01g69290.1"]
[{"$nulls":24},"Os05g0163300","Os09g0528300","Os09g0528300",-1.721025,0,null,"Os01g0885300",3.5199022,"Os02g0673700",-1.2354975,{"$nulls":29},"D26","d26, dwf22","DWARF 7237","7237 dwarf, dwarf-26",1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA155","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0490400","LOC_Os05g41150.1",{"$nulls":6},"IDS1","OsIDS1, AP2/EREBP#033, AP2/EREBP33, AP2-33/IDS1, AP2-33, AP2-2, DLN104, OsDLN104","INDETERMINATE SPIKELET 1","OsINDETERMINATE SPIKELET 1, INDETERMINATE SPIKELET1, APETALA2/ethylene-responsive element binding protein 33, APETALA2-2, DLN repressor 104, DLN motif protein 104",3," Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:2000028 - regulation of photoperiodism, flowering, GO:0009908 - flower development, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010076 - maintenance of floral meristem identity, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0002616 - flowering time, TO:0000650 - lemma length, TO:0000622 - flower development trait, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000137 - days to heading","PO:0007601 - floral organ meristem development stage , PO:0007615 - flower development stage ","Os03g0818800","LOC_Os03g60430.2, LOC_Os03g60430.1",{"$nulls":6},"ERD1","CLPD1, ClpD1, OsERD1, OSClpD, osClpD, OsClpD1, OsClpD1.1, OsClpD1.2, OsClpD1.3, OsClpD1.4","EARLY RESPONSIVE TO DEHYDRATION 1","class I Clp ATPase D1, early responsive to drought 1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0017111 - nucleoside-triphosphatase activity, GO:0005983 - starch catabolic process, GO:0019538 - protein metabolic process, GO:0009751 - response to salicylic acid stimulus, GO:0005524 - ATP binding, GO:0005515 - protein binding, GO:0008233 - peptidase activity, GO:0009941 - chloroplast envelope, GO:0006970 - response to osmotic stress, GO:0009414 - response to water deprivation, GO:0034605 - cellular response to heat, GO:0009651 - response to salt stress, GO:0006562 - proline catabolic process","TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000696 - starch content, TO:0000276 - drought tolerance, TO:0006002 - proline content, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity",null,"Os02g0526400","LOC_Os02g32520.2, LOC_Os02g32520.1",null,"Os01g0869900","Os03g0348900",1.7269961,0,null,"PLGG1","OsPLGG1","PLASTIDIC GLYCOLATE/GLYCERATE TRANSLOCATOR 1","plastidic glycolate/glycerate translocator 1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0009853 - photorespiration, GO:0043879 - glycolate transmembrane transporter activity, GO:0009507 - chloroplast","TO:0000326 - leaf color, TO:0000592 - 1000-dehulled grain weight, TO:0001015 - photosynthetic rate, TO:0000590 - grain weight, TO:0000346 - tiller number",null,"Os01g0511600","LOC_Os01g32830.2, LOC_Os01g32830.1"]
[{"$nulls":24},"Os02g0143100","Os09g0534800","Os09g0534800",1.389788,0,null,"Os06g0676700",3.519371,"Os08g0345700",-1.2344389,{"$nulls":29},"D54","d54(d K5), dK5, d54, dwf35","DWARF KYUSHU 5","dwarf Kyushu5, dwarf Kyushu 5, dwarf Kyushu-5, dwarf-54",1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000391 - seed size, TO:0000576 - stem length, TO:0000207 - plant height","PO:0009010 - seed , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA157","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0501350","LOC_Os05g42200.1",{"$nulls":6},"IAA29","OsIAA29, OsEnS-141","_","Aux/IAA protein 29, endosperm-specific gene 141",11," Seed - Morphological traits - Endosperm","GO:0048316 - seed development, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009960 - endosperm development","TO:0000653 - seed development trait","PO:0009089 - endosperm , PO:0001170 - seed development stage , PO:0007633 - endosperm development stage ","Os11g0221300","LOC_Os11g11430.1, LOC_Os11g11430.2",{"$nulls":6},"CLPD2","ClpD2, OsClpD2","CLASS I CLP ATPASE D2","class I Clp ATPase D2",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009408 - response to heat","TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance",null,"Os04g0405000","LOC_Os04g33210.1",null,"Os03g0223100","Os08g0198900",1.722679,0,null,"PDR2","OsPDR2","PHOSPHATE DEFICIENCY RESPONSE 2","Phosphate Deficiency Response2",5," Vegetative organ - Root,  Reproductive organ,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0055062 - phosphate ion homeostasis, GO:0010152 - pollen maturation, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0048364 - root development, GO:0009846 - pollen germination, GO:0010073 - meristem maintenance, GO:0016036 - cellular response to phosphate starvation, GO:0006874 - cellular calcium ion homeostasis, GO:0006812 - cation transport, GO:0046872 - metal ion binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity","TO:0000371 - yield trait, TO:0000656 - root development trait","PO:0007520 - root development stage ","Os05g0402800","LOC_Os05g33390.1"]
[{"$nulls":24},"Os08g0424500","Os10g0188100","Os10g0188100",-2.501489,0,null,"Os12g0601400",3.5169733,"Os02g0102900",-1.232772,{"$nulls":29},"D55","d55(d K6), dK6, dwf36, d55","DWARF KYUSHU 6","dwarf Kyushu6, dwarf Kyushu-6, dwarf Kyushu 6, dwarf-55",1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000370 - leaf width, TO:0000089 - panicle type, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000391 - seed size","PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"_","OsSTA158, STA158","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0537200","LOC_Os05g46030.1",{"$nulls":6},"ILI5","ILI5, OsILI5, PGL2, OsPGL2, Os170, OsBUL1, BUL1, ILI5/PGL2, OsbHLH170, bHLH170","INCREASED LEAF INCLINATION 5","Increased Leaf Inclination 5, POSITIVE REGULATOR OF GRAIN LENGTH 2, BRASSINOSTEROID UPREGULATED 1-LIKE1, BRASSINOSTEROID UPREGULATED1 LIKE1, basic helix-loop-helix protein 170",2," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0051510 - regulation of unidimensional cell growth, GO:0009409 - response to cold","TO:0000734 - grain length, TO:0000206 - leaf angle, TO:0000397 - grain size, TO:0002688 - leaf lamina joint bending, TO:0000303 - cold tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0002687 - cell elongation trait, TO:0000590 - grain weight","PO:0009046 - flower , PO:0009051 - spikelet ","Os02g0747900","LOC_Os02g51320.1",{"$nulls":6},"NAC122","OsNAC10, NAC10, ONAC122, NAC122, OsSNAC10, SNAC10","NAC DOMAIN-CONTAINING PROTEIN 122","NAC domain-containing protein 10, NAC domain-containing protein 122",11," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0051607 - defense response to virus, GO:0009635 - response to herbicide, GO:0003677 - DNA binding, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus","TO:0000058 - herbicide sensitivity, TO:0000148 - viral disease resistance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000386 - rice ragged stunt virus resistance, TO:0000615 - abscisic acid sensitivity, TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0006001 - salt tolerance",null,"Os11g0126900","LOC_Os11g03300.2, LOC_Os11g03300.1",null,"Os02g0755000","Os01g0178500",1.7180201,0,null,"_","OsLSK1, LSK1","_","Large spike S-domain receptor like Kinase 1",1," Tolerance and resistance,  Character as QTL - Yield and productivity","GO:0009939 - positive regulation of gibberellic acid mediated signaling, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0048544 - recognition of pollen, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009628 - response to abiotic stimulus, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress","TO:0006001 - salt tolerance, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000547 - primary branch number, TO:0000095 - osmotic response sensitivity",null,"Os01g0669100","LOC_Os01g47900.1"]
[{"$nulls":24},"Os01g0668100","Os10g0330400","Os10g0330400",-2.4915922,0,null,"Os11g0139400",3.5168636,"Os10g0545800",-1.2320004,{"$nulls":29},"DM-1*","Dm-1*","SHORT CULM SHOWING DM-TYPE","Short culm showing dm-type",1," Vegetative organ - Culm",null,"TO:0000207 - plant height",{"$nulls":10},"_","OsSTA160","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0568200","LOC_Os05g49310.1",{"$nulls":6},"ILI6","ILI6, OsILI6, PGL1, OsPGL1","INCREASED LEAF INCLINATION 6","Increased Leaf Inclination6, POSITIVE REGULATOR OF GRAIN LENGTH 1",3," Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005773 - vacuole, GO:0009640 - photomorphogenesis, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0010086 - embryonic root morphogenesis, GO:0009826 - unidimensional cell growth, GO:0009742 - brassinosteroid mediated signaling","TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length",null,"Os03g0171300","LOC_Os03g07510.1, LOC_Os03g07510.2",{"$nulls":6},"APX4","OsAPx4, OsAPx04, OSAPX4, APx4, pAPX4","ASCORBATE PEROXIDASE 4","ascorbate peroxidase 4, Peroxisomal APX 4",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0006979 - response to oxidative stress, GO:0016021 - integral to membrane, GO:0055114 - oxidation reduction, GO:0020037 - heme binding, GO:0042744 - hydrogen peroxide catabolic process, GO:0016688 - L-ascorbate peroxidase activity","TO:0000605 - hydrogen peroxide content, TO:0002657 - oxidative stress, TO:0000175 - bacterial blight disease resistance, TO:0000316 - photosynthetic ability, TO:0000319 - rubisco content",null,"Os08g0549100","LOC_Os08g43560.3, LOC_Os08g43560.2, LOC_Os08g43560.1",null,"Os01g0106900","Os07g0108400",1.7023994,0,null,"SUI2","OsSUI2, ES5, OsES5","SHORTENED UPPERMOST INTERNODE 2","Shortened Uppermost Internode 2, early leaf senescence 5",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0019827 - stem cell maintenance, GO:0007568 - aging, GO:0009658 - chloroplast organization, GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity, GO:0005789 - endoplasmic reticulum membrane, GO:0006646 - phosphatidylethanolamine biosynthetic process, GO:0048831 - regulation of shoot development, GO:0080006 - internode patterning, GO:0006659 - phosphatidylserine biosynthetic process, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate","PO:0005005 - shoot internode , PO:0007089 - stem elongation stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os05g0554400","LOC_Os05g48060.1"]
[{"$nulls":24},"Os03g0125000","Os10g0397900","Os10g0397900",-1.510375,0,null,"Os12g0136100",3.5168636,"Os01g0582600",-1.2315211,{"$nulls":29},"SSI1","Ssi1, Ssi1(Dm1)*, Dm1, Ssi1","SHORT SECOND INTERNODE 1","Short second internode1 (dm-type), Short second internode 1, Short second internode-1(dm-type), Short second internode-1",1," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000207 - plant height, TO:0000145 - internode length","PO:0005005 - shoot internode ",{"$nulls":9},"_","OsSTA161","_",null,5," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os05g0585800","LOC_Os05g50830.1, LOC_Os05g50830.2",{"$nulls":6},"IBH1","Os IBH1, OsIBH1, OsbHLH175, bHLH175","ILI1-BINDING BHLH PROTEIN 1","ILI1Binding bHLH Protein1, ILI1 Binding bHLH 1, basic helix-loop-helix protein 175",4," Vegetative organ - Leaf,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009826 - unidimensional cell growth, GO:0006351 - transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0002687 - cell elongation trait, TO:0000206 - leaf angle, TO:0002688 - leaf lamina joint bending",null,"Os04g0660100","LOC_Os04g56500.1",{"$nulls":6},"APX5","OsAPx5, OsAPx05, OSAPX5, APx5","ASCORBATE PEROXIDASE 5","ascorbate peroxidase 5",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009570 - chloroplast stroma, GO:0020037 - heme binding, GO:0042744 - hydrogen peroxide catabolic process, GO:0055114 - oxidation reduction, GO:0016688 - L-ascorbate peroxidase activity",null,null,"Os12g0178200","LOC_Os12g07830.1",null,"Os01g0560000","Os01g0831200",1.7014703,0,null,"PSD128","OsCDC48, CDC48, OsCDC48-1, CDC48-1","PREMATURE SENESCENCE AND DEATH 128","cell division cycle 48, premature senescence and death 128",3," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0051301 - cell division, GO:0010150 - leaf senescence, GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0016787 - hydrolase activity","TO:0000346 - tiller number, TO:0000325 - soluble protein content, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0002715 - chloroplast development trait, TO:0000396 - grain yield, TO:0000249 - leaf senescence",null,"Os03g0151800 ","LOC_Os03g05730.1"]
[{"$nulls":24},"Os03g0736300","Os10g0400900","Os10g0400900",-1.2071066,0,null,"Os11g0687100",3.514197,"Os03g0194500",-1.2311996,{"$nulls":29},"SSI2","ssi2*, ssi2","SHORT SECOND INTERNODE 2","Short second internode2 (dm-type), Short second internode 2, short second internode-2(dm-type), short second internode-2",1," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000145 - internode length, TO:0000207 - plant height","PO:0005005 - shoot internode ",{"$nulls":9},"_","OsSTA163","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0107000","LOC_Os06g01780.1",{"$nulls":6},"_","OsVPS22","_","VPS22 component of ESCRT-II complex, ESCRT-II complex VPS22 component",9," Seed - Physiological traits",{"$nulls":3},"Os09g0529700","LOC_Os09g36020.1",{"$nulls":6},"APX6","OsAPx6, OsAPx06, OSAPX6, APx6","ASCORBATE PEROXIDASE 6","ascorbate peroxidase 6",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0009570 - chloroplast stroma, GO:0042744 - hydrogen peroxide catabolic process, GO:0016688 - L-ascorbate peroxidase activity, GO:0042742 - defense response to bacterium, GO:0020037 - heme binding","TO:0000175 - bacterial blight disease resistance",null,"Os12g0178100","LOC_Os12g07820.1",null,"Os04g0462500","Os01g0718300",1.7013999,0,null,"PILS6B","OsPILS6b, PILS6b","PIN LIKES 6B","PIN likes 6b",5," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0055085 - transmembrane transport, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane","TO:0000163 - auxin sensitivity, TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000167 - cytokinin sensitivity",null,"Os05g0481900 ","LOC_Os05g40330.1"]
[{"$nulls":24},"Os06g0608700","Os11g0114600","Os11g0114600",-1.1342384,0,null,"Os10g0548000",3.5141475,"Os01g0928100",-1.2310828,{"$nulls":29},"TSA","tsa, ts1","TWISTED STEM-A","twisted stem-a, twisted stem-1",1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA164","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0114900","LOC_Os06g02450.1",{"$nulls":6},"GLUBX","OsGluBX, OsGluBX-J, OsGluBX-I, OsEnS-31, EnS-31, GLU2.1","GLUTELIN BX","endosperm-specific gene 31, Glutelin2.1",2," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0009415 - response to water, GO:0009651 - response to salt stress, GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development","TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os02g0242600 ","LOC_Os02g14600.1",{"$nulls":6},"APX7","OsAPx7, OsAPx07, OSAPX7, APx7, sAPX","ASCORBATE PEROXIDASE 7","ascorbate peroxidase 7, stromal Ascorbate Peroxidase",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0055114 - oxidation reduction, GO:0009570 - chloroplast stroma, GO:0042742 - defense response to bacterium, GO:0006801 - superoxide metabolic process, GO:0016688 - L-ascorbate peroxidase activity, GO:0009651 - response to salt stress, GO:0042744 - hydrogen peroxide catabolic process","TO:0002657 - oxidative stress, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance",null,"Os04g0434800","LOC_Os04g35520.4, LOC_Os04g35520.3, LOC_Os04g35520.2, LOC_Os04g35520.1",null,"Os10g0378300","Os01g0667700",1.6854154,0,null,"BG1","OsaBG1, OsBG1","BIG GRAIN1","big grain1, big grain 1",3," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009733 - response to auxin stimulus, GO:0009630 - gravitropism","TO:0000163 - auxin sensitivity, TO:0000181 - seed weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0002693 - gravity response trait","PO:0025205 - shoot system vascular system , PO:0005028 - inflorescence vascular system ","Os03g0175800","LOC_Os03g07920.1"]
[{"$nulls":24},"Os12g0597400","Os11g0124300","Os11g0124300",-2.5458815,0,null,"Os03g0855100",3.5127227,"Os02g0134200",-1.2308279,{"$nulls":29},"RD","Rd, DFR, OsDFR, OS-DFR","RED PERICARP AND SEED COAT","Red pericarp and seed coat, dihydroflavonol 4-reductase, dihydroflavonol-4-reductase",1," Biochemical character,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0003824 - catalytic activity, GO:0009416 - response to light stimulus, GO:0009813 - flavonoid biosynthetic process, GO:0010023 - proanthocyanidin biosynthetic process, GO:0002213 - defense response to insect, GO:0051555 - flavonol biosynthetic process, GO:0044237 - cellular metabolic process, GO:0043473 - pigmentation, GO:0005634 - nucleus, GO:0050662 - coenzyme binding, GO:0048316 - seed development, GO:0009718 - anthocyanin biosynthetic process, GO:0009812 - flavonoid metabolic process, GO:0009408 - response to heat","TO:0000706 - hull color, TO:0000185 - stigma color, TO:0000205 - white-backed planthopper resistance, TO:0000190 - seed coat color, TO:0000259 - heat tolerance, TO:0000653 - seed development trait, TO:0000486 - seed color, TO:0000487 - endosperm color, TO:0000140 - apiculus color, TO:0000075 - light sensitivity, TO:0000326 - leaf color, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color","PO:0006033 - paleal apiculus , PO:0009073 - stigma , PO:0009088 - seed coat , PO:0009089 - endosperm , PO:0001170 - seed development stage ","Os01g0633500","LOC_Os01g44260.1",{"$nulls":7},"_","OsSTA165","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",{"$nulls":8},"WOX4","OsWOX4, Os WOX4","WUSCHEL-LIKE HOMEOBOX 4","WUSCHEL-related homeobox 4, WUSCHEL-RELATED HOMEOBOX4",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0003700 - transcription factor activity, GO:0007275 - multicellular organismal development, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009959 - negative gravitropism, GO:0051510 - regulation of unidimensional cell growth, GO:0009635 - response to herbicide, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009555 - pollen development, GO:0008285 - negative regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009790 - embryonic development, GO:0010073 - meristem maintenance, GO:0043565 - sequence-specific DNA binding","TO:0000167 - cytokinin sensitivity, TO:0006017 - meristem identity, TO:0000276 - drought tolerance, TO:0000620 - embryo development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000391 - seed size, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000058 - herbicide sensitivity, TO:0002693 - gravity response trait","PO:0009010 - seed , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os04g0649400","LOC_Os04g55590.1",{"$nulls":6},"APX8","OsAPx8, OsAPx08, OSAPX8, APx8, OsAPX8","ASCORBATE PEROXIDASE 8","ascorbate peroxidase 8",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0031969 - chloroplast membrane, GO:0009651 - response to salt stress, GO:0016688 - L-ascorbate peroxidase activity, GO:0016021 - integral to membrane, GO:0042742 - defense response to bacterium, GO:0042744 - hydrogen peroxide catabolic process, GO:0020037 - heme binding","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content",null,"Os02g0553200","LOC_Os02g34810.1",null,"Os08g0101000","Os04g0671900",1.6843008,0,null,"NPF6.5","OsNRT1.1B, NRT1.1B, OsNPF6.5","NRT1/PTR FAMILY 6.5","nitrate transporter 1.1B",10," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010157 - response to chlorate, GO:0010167 - response to nitrate, GO:0016020 - membrane, GO:0006808 - regulation of nitrogen utilization, GO:0009608 - response to symbiont, GO:0005215 - transporter activity","TO:0000394 - drought related trait, TO:0000396 - grain yield","PO:0025034 - leaf , PO:0009005 - root ","Os10g0554200 ","LOC_Os10g40600.1"]
[{"$nulls":24},"Os03g0784000","Os11g0175700","Os11g0175700",2.8523216,0,null,"Os01g0895300",3.5101197,"Os12g0152700",-1.23023,{"$nulls":29},"SD1","sd1, sd1 (d47, sd1-d, sd1-1), d49(sd1-r), d47, C20OX2, OsGA20ox-2, OsGA20ox2, GA20ox-2, GA20OX2, GA20ox2, sd-1, SD1-ja, SD1-in, sd1-2, Sd-1, GA20, 20ox2, Os20ox2","SEMIDWARF 1","dee-geo-woo-gen dwarf(sd1-d), green revolution gene, semidwarf-1, GA C20oxidase2, semidwarf-1, reimei dwarf(sd1-r), Calrose76(sd1-3), Jikkoku(sd1-2). rice GA 20-oxidase2, GA 20-oxidase 2, Gibberellin 20 oxidase 2, Gibberellin C-20 oxidase 2, GA 20-oxidase 2, Protein semidwarf-1, semi-dwarf1",1," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0080006 - internode patterning, GO:0030912 - response to deep water, GO:0055114 - oxidation reduction, GO:0009826 - unidimensional cell growth, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0009686 - gibberellin biosynthetic process, GO:0048573 - photoperiodism, flowering, GO:0009628 - response to abiotic stimulus, GO:0045544 - gibberellin 20-oxidase activity, GO:0016491 - oxidoreductase activity","TO:0002616 - flowering time, TO:0000599 - enzyme activity, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002675 - gibberellic acid content, TO:0000401 - plant growth hormone sensitivity, TO:0000524 - submergence tolerance, TO:0000576 - stem length","PO:0009047 - stem , PO:0020142 - stem internode ","Os01g0883800","LOC_Os01g66100.1",{"$nulls":7},"_","OsSTA166","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0122900","LOC_Os06g03210.1",{"$nulls":6},"WOX5","OsWOX2, Os WOX2, WOX2, OsWOX5, OsWOX2L, WOX2L","WUSCHEL-LIKE HOMEOBOX 5","WUSCHEL-related homeobox 5",1," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Other","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0048316 - seed development, GO:0009960 - endosperm development, GO:0009790 - embryonic development, GO:0007275 - multicellular organismal development","TO:0000696 - starch content, TO:0002653 - endosperm storage protein content","PO:0009089 - endosperm ","Os01g0840300 ","LOC_Os01g62310.1",{"$nulls":6},"WRKY89","OsWRKY89","WRKY GENE 89",null,8," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000276 - drought tolerance",null,"Os08g0276200","LOC_Os08g17400.1",null,"Os05g0198400","Os03g0640800",1.6751747,0,null,"NPF6.3","OsNRT1.1A, NRT1.1A, OsNRT1.1A/ OsNPF6.3, OsNPF6.3","NRT1/PTR FAMILY 6.3","nitrate transporter 1.1A",8," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0006857 - oligopeptide transport, GO:0005215 - transporter activity, GO:0016021 - integral to membrane, GO:0009413 - response to flooding, GO:0060359 - response to ammonium ion, GO:2000028 - regulation of photoperiodism, flowering, GO:0006808 - regulation of nitrogen utilization","TO:0000114 - flooding related trait, TO:0000396 - grain yield","PO:0009005 - root ","Os08g0155400","LOC_Os08g05910.1, LOC_Os08g05910.2"]
[{"$nulls":24},"Os10g0317900","Os11g0207600","Os11g0207600",1.1310529,0,null,"Os10g0161400",3.5092266,"Os06g0184400",-1.229884,{"$nulls":29},"BC5","bc5, bn, bc-5","BRITTLE CULM 5","brittle node, brittle culm-5",2," Vegetative organ - Culm","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005886 - plasma membrane, GO:0009834 - secondary cell wall biogenesis, GO:0009531 - secondary cell wall, GO:0009808 - lignin metabolic process, GO:0031225 - anchored to membrane","TO:0000051 - stem strength, TO:0000108 - leaf shattering, TO:0000061 - node shattering","PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA167","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0126400","LOC_Os06g03630.1",{"$nulls":6},"MIR530","miR530, Osa-miR530, OsmiR530, osa-MIR530, osa-miR530 osa-miR530-3p, osa-miR530-5p","MICRORNA530","MICRORNA530, osa-miRNA530, os-miRNA530",4," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000391 - seed size, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000455 - seed set percent, TO:0000470 - vascular tissue related trait, TO:0000546 - peduncle top diameter, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0020103 - flag leaf , PO:0005004 - shoot node , PO:0009009 - plant embryo , PO:0009010 - seed ",{"$nulls":8},"WRKY94","OsWRKY94","WRKY GENE 94",null,12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0009409 - response to cold","TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance","PO:0025034 - leaf ","Os12g0597700","LOC_Os12g40570.1, LOC_Os12g40570.2",null,"Os05g0523300","Os02g0661100",1.6721458,0,null,"_","OsGME2, GME2","_","GDP-D-mannose epimerase 2",11," Biochemical character,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0005829 - cytosol, GO:0047918 - GDP-mannose 3,5-epimerase activity, GO:0051287 - NAD or NADH binding, GO:0019853 - L-ascorbic acid biosynthetic process","TO:0000382 - 1000-seed weight, TO:0000371 - yield trait, TO:0000448 - filled grain percentage, TO:0000436 - spikelet sterility",null,"Os11g0591100","LOC_Os11g37890.1, LOC_Os11g37890.2, LOC_Os11g37890.3"]
[{"$nulls":24},"Os03g0335500","Os11g0442500","Os11g0442500",1.14911,0,null,"Os04g0493600",3.5038273,"Os06g0202100",-1.2260755,{"$nulls":29},"GH2","gh2, CAD2, CAD, OsCAD2, GH2","GOLD HULL AND INTERNODE 2","gold hull and internode2, gold hull and internode-2, Cinnamyl alcohol dehydrogenase 2, Sinapyl alcohol dehydrogenase, Protein GOLD HULL AND INTERNODE 2, Cinnamyl alcohol dehydrogenase",2," Biochemical character,  Vegetative organ - Culm,  Coloration - Others,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009834 - secondary cell wall biogenesis, GO:0055114 - oxidation reduction, GO:0008270 - zinc ion binding, GO:0009642 - response to light intensity, GO:0045551 - cinnamyl-alcohol dehydrogenase activity, GO:0022900 - electron transport chain, GO:0042742 - defense response to bacterium, GO:0009411 - response to UV, GO:0009808 - lignin metabolic process, GO:0020037 - heme binding, GO:0009055 - electron carrier activity, GO:0009809 - lignin biosynthetic process","TO:0000460 - light intensity sensitivity, TO:0000426 - internode color, TO:0000190_TO:0000426 - \\seed coat color\\\" or \\\"internode color\\\", TO:0000733 - lignin biosynthesis trait, TO:0000732 - lignin monomer content, TO:0000264 - lemma and palea color, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000011 - nitrogen sensitivity, TO:0000051 - stem strength\"","PO:0000036 - leaf vascular system , PO:0000039 - shoot axis vascular system , PO:0003011 - root vascular system , PO:0009005 - root , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0009047 - stem ","Os02g0187800","LOC_Os02g09490.1",{"$nulls":7},"_","OsSTA168","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0150000","LOC_Os06g05710.1",{"$nulls":6},"_","EMP5, Os EMP5, OsEMP5","_","Empty Pericarp5",1," Seed",{"$nulls":3},"Os01g0959600","LOC_Os01g72930.1",{"$nulls":6},"WRKY104","OsWRKY104","WRKY GENE 104",null,11," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance",null,"Os11g0117400","LOC_Os11g02520.1",null,"Os09g0364800","Os11g0484500",1.6661419,0,null,"GW7","GL7, OsGL7, OsGW7, qGW7, qGL7, SLG7, GL7/GW7/SLG7, qPY7, GL7/SLG7","GRAIN LENGTH 7","Grain Length on Chromosome 7, grain width QTL on chromosome 7, Slender grain on chromosome 7",7," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009826 - unidimensional cell growth, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0000382 - 1000-seed weight, TO:0000371 - yield trait, TO:0000162 - seed quality, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0002757 - flag leaf length, TO:0000397 - grain size, TO:0002731 - grain length to width ratio","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os07g0603300","LOC_Os07g41200.1"]
[{"$nulls":24},"Os08g0237000","Os12g0122000","Os12g0122000",-2.6847703,0,null,"Os12g0136500",3.5036938,"Os01g0180800",-1.2255234,{"$nulls":29},"D30","d30(d W), dW, dwf26, d30","DWARF WAISEISHIRASASA","waiseishirasasa dwarf, dwarf-30",2," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development","TO:0000484 - seed shape, TO:0000207 - plant height, TO:0000339 - stem thickness, TO:0000492 - leaf shape, TO:0000473 - grain shattering, TO:0000391 - seed size, TO:0000576 - stem length","PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA169","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0158800","LOC_Os06g06430.1, LOC_Os06g06430.2",{"$nulls":6},"MADS78","OsMADS78","MADS BOX GENE 78","MADS box gene78, MADS box gene 78, MADS-box transcription factor 78",9," Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0080050 - regulation of seed development, GO:0010581 - regulation of starch biosynthetic process, GO:0010252 - auxin homeostasis, GO:0010342 - cellularization of endosperm, GO:0003677 - DNA binding, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent","TO:0000436 - spikelet sterility, TO:0000653 - seed development trait, TO:0000391 - seed size, TO:0000162 - seed quality, TO:0000592 - 1000-dehulled grain weight, TO:0002658 - starch grain synthesis, TO:0000484 - seed shape, TO:0000598 - protein content, TO:0000300 - glucose content, TO:0006005 - fructose content, TO:0002653 - endosperm storage protein content","PO:0009010 - seed , PO:0001170 - seed development stage ","Os09g0116800","LOC_Os09g02830.1",{"$nulls":6},"PIN5C","PIN5B, OsPIN5b, OsPIN5c","PIN PROTEIN 5C","PIN PROTEIN 5B",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0009415 - response to water","TO:0000237 - water stress trait",null,"Os09g0505400","LOC_Os09g32770.1",null,"Os03g0160100","Os06g0612800",1.6645236,0,null,"_",null,"_","a negative regulator of GL7",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000734 - grain length",null,"Os07g0603400","LOC_Os07g41210.1"]
[{"$nulls":24},"Os01g0851600","Os12g0158800","Os12g0158800",-1.4513336,0,null,"Os03g0816700",3.5029488,"Os02g0218200",-1.225317,{"$nulls":29},"D32","d32(d K4,d12), d12, dwf28, dK4, d32","DWARF KYUSHU 4","dwarf Kyushu4, dwarf Kyushu 4, dwarf Kyushu-4, dwarf-32",2," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000576 - stem length, TO:0000427 - culm angle, TO:0000484 - seed shape","PO:0006343 - axillary shoot system , PO:0009010 - seed , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA173","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0202800","LOC_Os06g10140.1",{"$nulls":6},"MADS79","OsMADS79","MADS BOX GENE 79","MADS box gene79, MADS box gene 79, MADS-box transcription factor 79",1," Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0005634 - nucleus, GO:0010581 - regulation of starch biosynthetic process, GO:0010252 - auxin homeostasis, GO:0010342 - cellularization of endosperm, GO:0080050 - regulation of seed development, GO:0003677 - DNA binding, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent","TO:0006005 - fructose content, TO:0000162 - seed quality, TO:0000592 - 1000-dehulled grain weight, TO:0002658 - starch grain synthesis, TO:0000484 - seed shape, TO:0002653 - endosperm storage protein content, TO:0000653 - seed development trait, TO:0000598 - protein content, TO:0000300 - glucose content, TO:0000391 - seed size","PO:0009010 - seed , PO:0001170 - seed development stage ","Os01g0975800","LOC_Os01g74440.1",{"$nulls":6},"PIN5B","PIN5C, OsPIN5c, OsPIN5b, PIN4","PIN PROTEIN 5B","PIN PROTEIN 5C, PROBABLE AUXIN EFFLUX CARRIER COMPONENT 5C",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0005783 - endoplasmic reticulum, GO:0010252 - auxin homeostasis, GO:0009415 - response to water","TO:0000237 - water stress trait, TO:0000040 - panicle length, TO:0000346 - tiller number",null,"Os08g0529000","LOC_Os08g41720.1",null,"Os03g0583900","Os04g0132500",1.6599321,0,null,"_","GL7-S1","_",null,7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000734 - grain length"]
[{"$nulls":24},"Os04g0430200","Os12g0179800","Os12g0179800",-1.8956517,0,null,"Os08g0556300",3.4994106,"Os02g0763200",-1.2244211,{"$nulls":29},"D5","d5, dwf5","DWARF BUNKETSUWAITO TILLERING","bunketsuwaito tillering dwarf, dwarf-5",2," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000370 - leaf width","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA174, RHS10","_","rice RHS10 ortholog",6," Vegetative organ - Root,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048767 - root hair elongation, GO:0016021 - integral to membrane","TO:0002665 - root hair length","PO:0009066 - anther , PO:0007519 - 5 root hair formation stage ","Os06g0486000","LOC_Os06g29080.1",{"$nulls":6},"MADS89","OsMADS89","MADS BOX GENE 89","MADS box gene89, MADS box gene 89, MADS-box transcription factor 89",1," Seed - Morphological traits - Endosperm,  Other","GO:0006351 - transcription, DNA-dependent, GO:0010342 - cellularization of endosperm, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent",null,null,"Os01g0288100","LOC_Os01g18440.1",{"$nulls":6},"WRKY81","OsWRKY81, OsWRKY33","WRKY GENE 81",null,3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0042742 - defense response to bacterium, GO:0009862 - systemic acquired resistance, salicylic acid mediated signaling pathway, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0009863 - salicylic acid mediated signaling pathway, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000454 - stem borer resistance, TO:0000112 - disease resistance",null,"Os03g0444900","LOC_Os03g33012.1",null,"Os01g0856500","Os10g0548700",1.6305237,0,null,"_","GL7-S2","_",null,7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000734 - grain length, TO:0000397 - grain size"]
[{"$nulls":24},"Os01g0966200","Os12g0572201","Os12g0572201",3.4903164,0,null,"Os01g0778900",3.494725,"Os02g0136800",-1.2242069,{"$nulls":29},"BC3","bc3, bc-3, OsDRP2B, DRP2B","BRITTLE CULM 3","brittle culm3, brittle culm 3, brittle culm-3, dynamin-related protein 2B",2," Vegetative organ - Culm","GO:0009531 - secondary cell wall, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009834 - secondary cell wall biogenesis, GO:0005525 - GTP binding, GO:0005886 - plasma membrane, GO:0003924 - GTPase activity, GO:0031225 - anchored to membrane, GO:0009808 - lignin metabolic process","TO:0000051 - stem strength, TO:0000061 - node shattering, TO:0000207 - plant height","PO:0009047 - stem , PO:0009049 - inflorescence ","Os02g0738900","LOC_Os02g50550.1",{"$nulls":7},"_","OsSTA175","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0526200","LOC_Os06g33460.1",{"$nulls":6},"_","OsAAE3, AAE3, OsOCS, OCS, 4CL","_","Acyl-Activating Enzyme 3, adenosine monophosphate binding protein 3, acyl activation enzyme 3, oxalyl-CoA synthetase",4," Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009507 - chloroplast, GO:0046686 - response to cadmium ion, GO:0048046 - apoplast, GO:0010214 - seed coat development, GO:0010044 - response to aluminum ion, GO:0010030 - positive regulation of seed germination, GO:0009910 - negative regulation of flower development, GO:0009908 - flower development, GO:0003824 - catalytic activity, GO:0009809 - lignin biosynthetic process, GO:0005737 - cytoplasm, GO:0009735 - response to cytokinin stimulus, GO:0009570 - chloroplast stroma, GO:0009506 - plasmodesma, GO:0005829 - cytosol, GO:0012501 - programmed cell death, GO:0033611 - oxalate catabolic process, GO:0042742 - defense response to bacterium, GO:0042743 - hydrogen peroxide metabolic process, GO:0050203 - oxalate-CoA ligase activity, GO:0050832 - defense response to fungus, GO:0009718 - anthocyanin biosynthetic process","TO:0000605 - hydrogen peroxide content, TO:0000731 - lignin content, TO:0000432 - temperature response trait, TO:0000080 - micronutrient sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000420 - fertility related trait, TO:0000622 - flower development trait","PO:0006016 - leaf epidermis , PO:0007615 - flower development stage ","Os04g0683700","LOC_Os04g58710.1",{"$nulls":6},"FRO2","OsFRO2, OsFRO1","FERRIC REDUCTASE 2","ferric reductase oxidase 2",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0050660 - FAD binding, GO:0005506 - iron ion binding, GO:0009055 - electron carrier activity, GO:0010039 - response to iron ion, GO:0009609 - response to symbiotic bacterium, GO:0016021 - integral to membrane, GO:0016491 - oxidoreductase activity","TO:0000224 - iron sensitivity",null,"Os04g0578600","LOC_Os04g48930.1, LOC_Os04g48930.2, LOC_Os04g48930.4, LOC_Os04g48930.3",null,"Os05g0207500","Os04g0423400",1.6304783,0,null,"LRK2","OsLRK2, OsPSKR8, PSKR8","LEUCINE-RICH RECEPTOR-LIKE KINASE 2","leucine-rich receptor-like kinase 2, Phytosulfokine Receptor 8",2," Vegetative organ - Root,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0048527 - lateral root development, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005886 - plasma membrane","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000203 - bacterial leaf streak disease resistance, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000653 - seed development trait, TO:0001013 - lateral root number, TO:0000346 - tiller number","PO:0009066 - anther , PO:0005004 - shoot node , PO:0009005 - root , PO:0000055 - bud , PO:0001170 - seed development stage , PO:0009009 - plant embryo , PO:0025034 - leaf ","Os02g0154000","LOC_Os02g05970.1"]
[{"$nulls":24},"Os01g0618100","Os06g0142200","Os06g0142200",8.33086,0,null,"Os12g0176300",3.4923658,"Os02g0817200",-1.2237717,{"$nulls":29},"D29","d29(d K1), dwf25, dK1, d29","DWARF SHORT UPPERMOST INTERNODE","short uppermost internode dwarf, dwarf-29",2," Vegetative organ - Culm","GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000165 - panicle exsertion, TO:0000145 - internode length, TO:0000207 - plant height","PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020142 - stem internode ",{"$nulls":9},"ANTH11","OsSTA176, OsANTH11","ANTH DOMAIN-CONTAINING PROTEIN 11","AP180 N-terminal homology domain-containing protein 11, ANTH domain-containing protein 11",6," Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005545 - phosphatidylinositol binding, GO:0006897 - endocytosis, GO:0030276 - clathrin binding, GO:0030136 - clathrin-coated vesicle, GO:0005905 - coated pit, GO:0005794 - Golgi apparatus, GO:0006900 - membrane budding, GO:0048268 - clathrin coat assembly, GO:0000149 - SNARE binding, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0032050 - clathrin heavy chain binding, GO:0009555 - pollen development, GO:0005886 - plasma membrane, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0009860 - pollen tube growth",null,"PO:0001007 - pollen development stage , PO:0009066 - anther ","Os06g0661400","LOC_Os06g45050.1",{"$nulls":6},"_","OsTCP25, TCP25","_","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 25",9," Seed - Morphological traits - Endosperm","GO:0005737 - cytoplasm, GO:0005634 - nucleus",null,"PO:0009089 - endosperm ","Os09g0521300","LOC_Os09g34950.1",{"$nulls":6},"RAC1","OsRAC1, OsRac1, Os Rac1, Rac1, Os-Rac1","RAC/ROP-TYPE GTPASE 1","small GTP-binding protein 1, Rac-like GTP-binding protein 1, GTPase Rac homolog, Rice homolog of mammalian Rac-GTPase RAC1",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0005525 - GTP binding, GO:0005737 - cytoplasm, GO:0006915 - apoptosis, GO:0019898 - extrinsic to membrane, GO:0005886 - plasma membrane, GO:0002238 - response to molecule of fungal origin, GO:0007264 - small GTPase mediated signal transduction, GO:0050832 - defense response to fungus, GO:0052567 - response to defense-related host reactive oxygen species production, GO:0006952 - defense response, GO:0031347 - regulation of defense response, GO:0051302 - regulation of cell division","TO:0000112 - disease resistance, TO:0000439 - fungal disease resistance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000590 - grain weight","PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009066 - anther ","Os01g0229400","LOC_Os01g12900.3, LOC_Os01g12900.2, LOC_Os01g12900.1",null,"Os08g0241400","Os02g0763000",1.6272846,0,null,"GSD1","OsREM6.6, REM6.6, OsGSD1","GRAIN SETTING DEFECT1","Grain setting defect1, Grain setting defect 1, Remorin 6.6, remorin group 6 member 6, remorin family protein GSD1",4," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0010497 - plasmodesmata-mediated intercellular transport, GO:0010431 - seed maturation, GO:0008643 - carbohydrate transport, GO:0009506 - plasmodesma","TO:0000328 - sucrose content, TO:0000333 - sugar content, TO:0000382 - 1000-seed weight, TO:0000291 - carbohydrate content, TO:0000696 - starch content, TO:0000399 - grain thickness, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0002661 - seed maturation","PO:0000071 - companion cell , PO:0007632 - seed maturation stage ","Os04g0620200","LOC_Os04g52920.1, LOC_Os04g52920.2"]
[{"$nulls":24},"Os09g0436500","Os05g0387300","Os05g0387300",6.5283504,0,null,"Os12g0572201",3.4903164,"Os05g0114800",-1.2236433,{"$nulls":29},"ACS1","ACC1*, OsACS1, Os-ACS1, ACC1, OsACC1","ACC SYNTHASE 1","1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 1, ACC synthase 1, 1-aminocyclopropane-1-carboxylate synthase 1, ACC synthase-1, S-adenosyl-L-methionine methylthioadenosine-lyase 1, 1-aminocyclopropane-1-carboxylic acid synthase 1",3," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009058 - biosynthetic process, GO:0008483 - transaminase activity, GO:0009733 - response to auxin stimulus, GO:0016769 - transferase activity, transferring nitrogenous groups, GO:0009835 - ripening, GO:0009693 - ethylene biosynthetic process, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0002213 - defense response to insect, GO:0010446 - response to alkalinity, GO:0009734 - auxin mediated signaling pathway, GO:0042594 - response to starvation, GO:0030170 - pyridoxal phosphate binding, GO:0046689 - response to mercury ion, GO:0046687 - response to chromate, GO:0048364 - root development, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium, GO:0005737 - cytoplasm, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity","TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000163 - auxin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000481 - alkali sensitivity, TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0000034 - chromium sensitivity, TO:0000259 - heat tolerance, TO:0000576 - stem length","PO:0020103 - flag leaf , PO:0009005 - root , PO:0009006 - shoot system ","Os03g0727600","LOC_Os03g51740.1",{"$nulls":7},"_","OsSTA177","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0663000","LOC_Os06g45240.1",{"$nulls":6},"PPGM","OspPGM, pPGM","PLASTIDIC PHOSPHOGLUCOMUTASE","Phosphoglucomutase, Plastidic phosphoglucomutase, plastidic PGM",10," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits - Storage substances","GO:0010319 - stromule, GO:0005992 - trehalose biosynthetic process, GO:0009941 - chloroplast envelope, GO:0000287 - magnesium ion binding, GO:0048046 - apoplast, GO:0004614 - phosphoglucomutase activity, GO:0005829 - cytosol, GO:0009409 - response to cold, GO:0009570 - chloroplast stroma, GO:0009590 - detection of gravity, GO:0019252 - starch biosynthetic process, GO:0019388 - galactose catabolic process, GO:0009536 - plastid","TO:0000106 - male sterility type, TO:0000696 - starch content",null,"Os10g0189100 ","LOC_Os10g11140.1, LOC_Os10g11140.2",{"$nulls":6},"RAC3","OsRac3","RAC/ROP-TYPE GTPASE 3","small GTP-binding protein 3, Rac-like GTP-binding protein 3",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0043226 - organelle, GO:0048767 - root hair elongation, GO:0006952 - defense response, GO:0019898 - extrinsic to membrane, GO:0007264 - small GTPase mediated signal transduction, GO:0005737 - cytoplasm, GO:0005525 - GTP binding","TO:0000276 - drought tolerance, TO:0002665 - root hair length, TO:0000112 - disease resistance","PO:0000256 - root hair cell , PO:0007519 - 5 root hair formation stage , PO:0009066 - anther ","Os02g0742200","LOC_Os02g50860.1",null,"Os06g0713800","Os05g0402700",1.6210235,0,null,"YGL9","OscpSRP43, cpSRP43, PGL3","YELLOW-GREEN LEAF 9","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Coloration - Others,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005786 - signal recognition particle, endoplasmic reticulum targeting, GO:0080085 - signal recognition particle, chloroplast targeting, GO:0048573 - photoperiodism, flowering, GO:0015995 - chlorophyll biosynthetic process, GO:0010150 - leaf senescence, GO:0009507 - chloroplast, GO:0010218 - response to far red light, GO:0042440 - pigment metabolic process, GO:0009941 - chloroplast envelope, GO:0009760 - C4 photosynthesis, GO:0009658 - chloroplast organization, GO:0010114 - response to red light, GO:0010155 - regulation of proton transport, GO:0009744 - response to sucrose stimulus, GO:0009637 - response to blue light, GO:0015994 - chlorophyll metabolic process, GO:0009535 - chloroplast thylakoid membrane, GO:0045038 - protein import into chloroplast thylakoid membrane, GO:0046777 - protein amino acid autophosphorylation, GO:0016116 - carotenoid metabolic process, GO:0019344 - cysteine biosynthetic process, GO:0015979 - photosynthesis","TO:0000249 - leaf senescence, TO:0002715 - chloroplast development trait, TO:0000432 - temperature response trait, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000605 - hydrogen peroxide content, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000137 - days to heading, TO:0000293 - chlorophyll-a content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os03g0131900","LOC_Os03g03990.1"]
[{"$nulls":24},"Os10g0533500","Os07g0674800","Os07g0674800",5.973049,0,null,"Os08g0369800",3.4886692,"Os11g0704525",-1.2235928,{"$nulls":29},"D14","d14(d10), dwf13, d10, d14, D88, HTD2, OsD14, qPPB3, D88/D14, HTD4","DWARF KAMIKAWABUNWAI TILLERING","kamikawabunwai tillering dwarf, dwarf-14, DWARF14, dwarf 14, Dwarf 88, HIGH-TILLERING DWARF 2, Primary panicle branch number 3, high-tillering dwarf 4",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0009755 - hormone-mediated signaling, GO:0007275 - multicellular organismal development, GO:0016787 - hydrolase activity, GO:0042594 - response to starvation, GO:0009610 - response to symbiotic fungus","TO:0000207 - plant height, TO:0000011 - nitrogen sensitivity, TO:0002688 - leaf lamina joint bending, TO:0002639 - shoot branching, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000576 - stem length, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0000544 - mesocotyl length, TO:0000329 - tillering ability, TO:0000339 - stem thickness","PO:0006343 - axillary shoot system , PO:0009047 - stem ","Os03g0203200","LOC_Os03g10620.1, LOC_Os03g10620.3, LOC_Os03g10620.2",{"$nulls":7},"_","OsSTA178, STA178","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os06g0690100",{"$nulls":7},"FKII","OsFKII, OsFK1, FK1","FRUCTOKINASE II","Fructokinase, fructokinase II, Fructokinase 1, Fructokinase-2",8," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0006000 - fructose metabolic process, GO:0019252 - starch biosynthetic process, GO:0046688 - response to copper ion, GO:0008865 - fructokinase activity","TO:0000021 - copper sensitivity",null,"Os08g0113100 ","LOC_Os08g02120.1",{"$nulls":6},"ACDR1","OsEDR1, OsACDR1, EDR1, OsMAPKKK1, MAPKKK1, SPL3, OsSPL3","ACCELERATED CELL DEATH AND RESISTANCE 1","Oryza sativa accelerated cell death and resistance 1, accelerated cell death and resistance 1, enhanced disease resistance 1, EDR1 ortholog",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010364 - regulation of ethylene biosynthetic process, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0008219 - cell death, GO:0046777 - protein amino acid autophosphorylation, GO:0000165 - MAPKKK cascade, GO:0009723 - response to ethylene stimulus, GO:0009620 - response to fungus, GO:0009617 - response to bacterium, GO:0005524 - ATP binding, GO:0004709 - MAP kinase kinase kinase activity, GO:0000186 - activation of MAPKK activity","TO:0000276 - drought tolerance, TO:0002668 - jasmonic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance",null,"Os03g0160100","LOC_Os03g06410.1",null,"Os10g0562700","Os01g0803200",1.6096429,0,null,"F3H1","OsF3H-1, F3H-1, OsF3H1, OsF3H, F3H","FLAVANONE 3-HYDROXYLASE 1","Flavanone 3-hydroxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Character as QTL - Yield and productivity","GO:0009718 - anthocyanin biosynthetic process, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0045486 - naringenin 3-dioxygenase activity, GO:0010224 - response to UV-B, GO:0002213 - defense response to insect, GO:0009698 - phenylpropanoid metabolic process, GO:0016491 - oxidoreductase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0051555 - flavonol biosynthetic process","TO:0000328 - sucrose content, TO:0000205 - white-backed planthopper resistance, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0000290 - flavonoid content, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color, TO:0000180 - spikelet fertility",null,"Os04g0662600","LOC_Os04g56700.1"]
[{"$nulls":24},"Os06g0131700","Os10g0552300","Os10g0552300",5.4889774,0,null,"Os10g0389800",3.4815445,"Os01g0681200",-1.2221404,{"$nulls":29},"D20","d20, dwf17","DWARF HAYAYUKI","hayayuki dwarf, dwarf-20",3," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000089 - panicle type, TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"_","OsSTA179","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os06g48790",{"$nulls":6},"_","OsNPK1-PK, NPK1-PK, OsMKKK62, MKKK62, OsMAPKKK62, MAPKKK62","_","NPK1-related protein kinase, MAPK kinase kinase 62",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0005524 - ATP binding, GO:2000033 - regulation of seed dormancy, GO:0004674 - protein serine/threonine kinase activity","TO:0000172 - jasmonic acid sensitivity, TO:0000253 - seed dormancy, TO:0000615 - abscisic acid sensitivity",null,"Os01g0699600","LOC_Os01g50420.1",{"$nulls":6},"RBOHC","rbohC, OsrbohC, Os rbohC, OsRbohC, OsNox5, Nox5, OsrbohD, OsRboh5, RBOHA, OsRboh5, Rboh5","RESPIRATORY BURST OXIDASE HOMOLOG C","Respiratory Burst Oxidase Homolog C, NADPH oxidase 5",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010119 - regulation of stomatal movement, GO:0043069 - negative regulation of programmed cell death, GO:0050664 - oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0052542 - callose deposition during defense response, GO:0009413 - response to flooding, GO:0002679 - respiratory burst during defense response, GO:0004601 - peroxidase activity, GO:0005509 - calcium ion binding, GO:0005887 - integral to plasma membrane, GO:0009723 - response to ethylene stimulus, GO:0009737 - response to abscisic acid stimulus","TO:0000276 - drought tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity","PO:0000256 - root hair cell , PO:0006023 - bundle sheath ","Os05g0528000","LOC_Os05g45210.3, LOC_Os05g45210.2, LOC_Os05g45210.1",null,"Os01g0574600","Os04g0677500",1.593483,0,null,"_","OsLTPL36, LTPL36","_",null,3," Biochemical character,  Seed,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste,  Character as QTL - Yield and productivity","GO:0009845 - seed germination, GO:0009790 - embryonic development, GO:0048316 - seed development","TO:0000162 - seed quality, TO:0000280 - seedling vigor, TO:0000620 - embryo development trait, TO:0000604 - fat and essential oil content, TO:0000266 - chalky endosperm, TO:0000382 - 1000-seed weight, TO:0000180 - spikelet fertility, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0005360 - aleurone layer , PO:0007631 - plant embryo stage , PO:0009088 - seed coat , PO:0007057 - 0 seed germination stage ","Os03g0369100 ","LOC_Os03g25350.1"]
[{"$nulls":24},"Os07g0148900","Os10g0352000","Os10g0352000",5.312212,0,null,"Os02g0197700",3.473499,"Os02g0575000",-1.2214092,{"$nulls":29},"D52","d52(d K2), dK2, dwf33, d52","DWARF KYUSHU 2","dwarf Kyushu2, dwarf Kyushu 2, dwarf Kyushu-2, dwarf-52",3," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height",{"$nulls":10},"_","OsSTA180","_",null,6," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os06g49850",{"$nulls":6},"ADF4","OsADF4, OsADF","ACTIN DEPOLYMERIZING FACTOR 4","actin depolymerizing factor 4",3," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0030042 - actin filament depolymerization, GO:0015629 - actin cytoskeleton",null,null,"Os03g0820600",{"$nulls":7},"RBOHA","rbohA, OsrbohA, Os rbohA, OsRbohA, OsNox2, Nox2, OsRboh2, Rboh2","RESPIRATORY BURST OXIDASE HOMOLOG A","Respiratory Burst Oxidase Homolog A, respiratory burst oxidase homologue A, NADPH oxidase 2",1," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042554 - superoxide anion generation, GO:0009644 - response to high light intensity, GO:0002679 - respiratory burst during defense response, GO:0005887 - integral to plasma membrane, GO:0009723 - response to ethylene stimulus, GO:0010119 - regulation of stomatal movement, GO:0016491 - oxidoreductase activity, GO:0043069 - negative regulation of programmed cell death, GO:0009414 - response to water deprivation, GO:0050793 - regulation of developmental process, GO:0006979 - response to oxidative stress, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0009413 - response to flooding, GO:0009753 - response to jasmonic acid stimulus, GO:0050832 - defense response to fungus, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0052542 - callose deposition during defense response, GO:0009737 - response to abscisic acid stimulus","TO:0000255 - sheath blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000457 - total biomass yield, TO:0000430 - germination rate, TO:0000172 - jasmonic acid sensitivity, TO:0000639 - seed fertility, TO:0000524 - submergence tolerance, TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity","PO:0006023 - bundle sheath ","Os01g0734200","LOC_Os01g53294.1",null,"Os02g0559400","Os07g0693000",1.5852586,0,null,"JMT1","OsJMT1","JASMONIC ACID CARBOXYL METHYLTRANSFERASE 1","Jasmonic acid carboxyl methyltransferase 1",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0032259 - methylation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0010363 - regulation of plant-type hypersensitive response, GO:0042538 - hyperosmotic salinity response, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0002213 - defense response to insect, GO:0008168 - methyltransferase activity, GO:0006612 - protein targeting to membrane, GO:0009620 - response to fungus, GO:0009695 - jasmonic acid biosynthetic process, GO:0009738 - abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0002668 - jasmonic acid content, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000259 - heat tolerance",null,"Os05g0102000","LOC_Os05g01140.1"]
[{"$nulls":24},"Os01g0214600","Os11g0702200","Os11g0702200",5.245071,0,null,"Os03g0161400",3.4722931,"Os08g0409233",-1.2214084,{"$nulls":29},"D56","d56(d K7), dwf37, dK7, d56","DWARF KYUSHU 7","dwarf Kyushu7, dwarf Kyushu-7, dwarf Kyushu 7, dwarf-56",3," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA181, STA181, OsPMT16, PMT16","_","pectin methyltransferase 16",6," Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0045488 - pectin metabolic process","TO:0000223 - pistil anatomy and morphology trait, TO:0002609 - stamen length, TO:0002610 - pistil length, TO:0000392 - sterility or fertility trait, TO:0006022 - floral organ development trait","PO:0009030 - carpel , PO:0025585 - floral organ formation stage , PO:0025395 - floral organ , PO:0009066 - anther ","Os06g0712800","LOC_Os06g49860.1",{"$nulls":6},"ASP1","OsAsp1","ASPARTIC PROTEASE 1","aspartic protease 1",11," Biochemical character,  Seed - Morphological traits - Embryo","GO:0010601 - positive regulation of auxin biosynthetic process, GO:0004190 - aspartic-type endopeptidase activity, GO:0009505 - plant-type cell wall, GO:0010252 - auxin homeostasis, GO:0006508 - proteolysis, GO:0009733 - response to auxin stimulus, GO:0010154 - fruit development","TO:0002672 - auxin content, TO:0000163 - auxin sensitivity","PO:0001002 - fruit development stage ","Os11g0184800","LOC_Os11g08200.1",{"$nulls":6},"RBOHD","rbohD, OsrbohD, Os rbohD, OsRbohD, OsNox4, OsRboh4, Rboh4","RESPIRATORY BURST OXIDASE HOMOLOG D","Respiratory Burst Oxidase Homolog D, NADPH oxidase 4",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0004601 - peroxidase activity, GO:0005509 - calcium ion binding, GO:0016021 - integral to membrane, GO:0050664 - oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor, GO:0009413 - response to flooding, GO:0009733 - response to auxin stimulus, GO:0009734 - auxin mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000524 - submergence tolerance, TO:0000163 - auxin sensitivity",null,"Os05g0465800","LOC_Os05g38980.1",null,"Os10g0147400","Os01g0858350",1.5791484,0,null,"_","OscZOG1, cZOG1","_","zeatin O-glucosyltransferase 1, cis-zeatin O-glucosyltransferase 1",4," Biochemical character,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0016758 - transferase activity, transferring hexosyl groups, GO:0033399 - cis-zeatin metabolic process, GO:0048364 - root development, GO:0048367 - shoot development, GO:0048527 - lateral root development, GO:0005634 - nucleus, GO:0005737 - cytoplasm","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000391 - seed size, TO:0000447 - filled grain number, TO:0000656 - root development trait, TO:0000654 - shoot development trait, TO:0001012 - lateral root length, TO:0001013 - lateral root number, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability","PO:0006079 - shoot meristem , PO:0007089 - stem elongation stage , PO:0007520 - root development stage , PO:0006085 - root meristem ","Os04g0271700 ","LOC_Os04g20330.1"]
[{"$nulls":24},"Os08g0160500","Os01g0273800","Os01g0273800",4.9486427,0,null,"Os07g0214900",3.4705398,"Os10g0482000",-1.2198505,{"$nulls":29},"BC1","bc1, bc-1, OsBC1, CWA1, FP1, OsPCS3, PCS3","BRITTLE CULM 1","brittle culm1, BRITTLE CULM1, brittle culm-1, COBRA-like protein 5, Protein BRITTLE CULM1, Cell Wall Architecture 1, fragile plant 1, Phytochelatin synthase 3",3," Vegetative organ - Culm","GO:0009808 - lignin metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0005886 - plasma membrane, GO:0009531 - secondary cell wall, GO:0031225 - anchored to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000061 - node shattering, TO:0000108 - leaf shattering, TO:0000051 - stem strength","PO:0020039 - leaf lamina , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009025 - vascular leaf , PO:0000077 - sclerenchyma cell , PO:0009005 - root , PO:0009015 - portion of vascular tissue , PO:0020104 - leaf sheath ","Os03g0416200","LOC_Os03g30250.1",{"$nulls":7},"_","OsSTA184","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0102200","LOC_Os07g01230.1",{"$nulls":6},"_","OsRAL6","_",null,7," Seed - Physiological traits - Storage substances","GO:0006508 - proteolysis, GO:0004190 - aspartic-type endopeptidase activity, GO:0009505 - plant-type cell wall",{"$nulls":10},"RBOHG","rbohG, OsrbohG, Os rbohG, OsRbohG, OsNox7, Nox7, OsrbohB, OsRBOHB, RBOHB, OsRboh7, Rboh7","RESPIRATORY BURST OXIDASE HOMOLOG G","Respiratory Burst Oxidase Homolog G, NADPH oxidase 7",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009413 - response to flooding, GO:0009609 - response to symbiotic bacterium, GO:0004601 - peroxidase activity, GO:0005509 - calcium ion binding, GO:0016021 - integral to membrane, GO:0050664 - oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor, GO:0009737 - response to abscisic acid stimulus","TO:0000276 - drought tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity","PO:0004006 - mesophyll cell ","Os09g0438000","LOC_Os09g26660.1",null,"Os05g0517200","Os02g0723200",1.5736467,0,null,"_","OsEnS-86, EnS-86, MEG3","_","endosperm-specific gene 86, Maternally Expressed Gene 3",6," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000304 - seed thickness, TO:0000382 - 1000-seed weight",null,"Os06g0498150","LOC_Os06g30280.1"]
[{"$nulls":24},"Os06g0604200","Os07g0645000","Os07g0645000",4.7497783,0,null,"Os11g0629400",3.4702833,"Os04g0244400",-1.2191443,{"$nulls":29},"FC1","fc1, OsTB1, tb1, OsTB1/FC1, Os TB1, TB1, OsFC1","FINE CULM 1","fine culm1, fine culm 1, fine culm-1, lateral branching-1(t), teosinte-branching 1, Fine culm 1, teosinte branched1 protein, teosinte branched 1 protein, transcription factor OsTB1, teosinte branched1, FINE CULM1",3," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009725 - response to hormone stimulus, GO:0007623 - circadian rhythm, GO:0048831 - regulation of shoot development, GO:0009735 - response to cytokinin stimulus, GO:0007275 - multicellular organismal development, GO:0009733 - response to auxin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0007049 - cell cycle, GO:0030528 - transcription regulator activity, GO:0005634 - nucleus","TO:0000339 - stem thickness, TO:0000163 - auxin sensitivity, TO:0000027 - culm number, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000401 - plant growth hormone sensitivity, TO:0000152 - panicle number, TO:0000661 - tiller bud dormancy, TO:0000396 - grain yield, TO:0000167 - cytokinin sensitivity, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching","PO:0025034 - leaf , PO:0000055 - bud , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0007041 - inflorescence emergence stage , PO:0004709 - axillary bud , PO:0006343 - axillary shoot system ","Os03g0706500 ","LOC_Os03g49880.1",{"$nulls":7},"_","OsSTA185","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0115200","LOC_Os07g02430.1",{"$nulls":6},"MIR164C","miR164c, osa-miR164c","MICRORNA164C","MICRORNA164c, osa-miRNA164c",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Physiological traits,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0048366 - leaf development, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0010199 - organ boundary specification between lateral organs and the meristem","TO:0000437 - male sterility, TO:0000207 - plant height, TO:0000202 - germination ratio, TO:0000345 - seed viability, TO:0000655 - leaf development trait, TO:0000225 - stamen number","PO:0001050 - leaf development stage ",{"$nulls":8},"ROPGEF1","Os RopGEF1, OsRopGEF1, RopGEF1, OsRacGEF7, RacGEF7","ROP-SPECIFIC GUANINE NUCLEOTIDE EXCHANGE FACTOR 1","guanine nucleotide exchange factor for Rop 1, Rop-specific GEF1, Rop-specific guanine nucleotide exchange factor 1",10," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005089 - Rho guanyl-nucleotide exchange factor activity, GO:0005886 - plasma membrane, GO:0016301 - kinase activity","TO:0000276 - drought tolerance",null,"Os10g0550300","LOC_Os10g40270.1",null,"Os07g0685700","Os08g0468100",1.5727873,0,null,"HAP5L","OsEnS-133, OsHAP5L, OsNF-YC12, NF-YC12, OsNF-YC11, NF-YC11, NFYC11","HAP5L SUBUNIT OF CCAAT-BOX BINDING COMPLEX ","endosperm-specific gene 133, Nuclear Factor Y subunit C12, NUCLEAR FACTOR-Y subunit C11, NUCLEAR FACTOR-Y subunit NF-YC11, NF-YC transcription factor 11, NF-YC subunit 11, NF-YC family 11",10," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0005737 - cytoplasm, GO:0048316 - seed development, GO:0005634 - nucleus, GO:0019252 - starch biosynthetic process, GO:0016602 - CCAAT-binding factor complex, GO:0009660 - amyloplast organization, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009960 - endosperm development","TO:0000696 - starch content, TO:0000734 - grain length, TO:0000196 - amylose content, TO:0000598 - protein content, TO:0000590 - grain weight, TO:0000487 - endosperm color, TO:0002655 - starch grain size, TO:0002656 - starch grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000266 - chalky endosperm","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0001170 - seed development stage , PO:0006220 - central endosperm ","Os10g0191900","LOC_Os10g11580.1"]
[{"$nulls":24},"Os04g0604900","Os04g0271700","Os04g0271700",4.4586425,0,null,"Os08g0518900",3.4670722,"Os01g0690800",-1.2190024,{"$nulls":29},"RCN2","rcn2","REDUCED CULM NUMBER 2","reduced culm number2, reduced culm number 2, reduced culm number-2",4," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000152 - panicle number","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA186","_",null,7," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016036 - cellular response to phosphate starvation","TO:0000102 - phosphorus sensitivity, TO:0006001 - salt tolerance","PO:0009066 - anther ","Os07g0137800","LOC_Os07g04520.1",{"$nulls":6},"MIR396C","miR396c, osa-miR396c, osa-MIR396c, osa-miR396c-3p, osa-miR396c-5p, OsmiR396c","MICRORNA396C","MICRORNA396c, osa-miRNA396c",2," Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0009409 - response to cold, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000397 - grain size, TO:0000396 - grain yield",{"$nulls":9},"ROPGEF7","Os RopGEF7, OsRopGEF7, RopGEF7, OsRacGEF2, RacGEF2, OsRacGEF1, RacGEF1","ROP-SPECIFIC GUANINE NUCLEOTIDE EXCHANGE FACTOR 7","GEF for ROP 7, guanine nucleotide exchange factor for Rop 7, Rop-specific GEF7, Rop-specific guanine nucleotide exchange factor 7, small GTPase Rac/ROP guanine nucleotide exchange factor 2",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0007389 - pattern specification process, GO:0009414 - response to water deprivation, GO:0005089 - Rho guanyl-nucleotide exchange factor activity, GO:0000271 - polysaccharide biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0006952 - defense response, GO:0008356 - asymmetric cell division, GO:0008361 - regulation of cell size, GO:0009825 - multidimensional cell growth, GO:0009860 - pollen tube growth, GO:0009926 - auxin polar transport, GO:0010075 - regulation of meristem growth, GO:0016324 - apical plasma membrane, GO:0043481 - anthocyanin accumulation in tissues in response to UV light, GO:0048767 - root hair elongation, GO:0080092 - regulation of pollen tube growth","TO:0000276 - drought tolerance, TO:0000112 - disease resistance",null,"Os09g0544800","LOC_Os09g37270.1, LOC_Os09g37270.2",null,"Os10g0556200","Os03g0157300",1.5712484,0,null,"_","OsglHAT1, glHAT1, GW6a, OsGW6a, OsGNAT1, GNAT1","_","GCN5-related N-acetyltransferase-like histone acetyltransferase 1, GNAT-like HAT1, Grain weight on chromosome 6-a",6," Character as QTL - Yield and productivity","GO:0004402 - histone acetyltransferase activity, GO:0005634 - nucleus, GO:0008080 - N-acetyltransferase activity","TO:0002661 - seed maturation, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000402 - grain width, TO:0000735 - plastochron, TO:0000396 - grain yield","PO:0000017 - vascular leaf primordium ","Os06g0650300","LOC_Os06g44100.1"]
[{"$nulls":24},"Os01g0924000","Os01g0546400","Os01g0546400",4.2233124,0,null,"Os10g0390000",3.4654856,"Os04g0616700",-1.218822,{"$nulls":29},"D31","d31, dwf27","DWARF TAICHUNG 155 IRRADIATED","taichung 155 irradiated dwarf, taichung-155-irradiated dwarf, dwarf-31",4," Vegetative organ - Culm","GO:0015995 - chlorophyll biosynthetic process, GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000299 - leaf lamina color, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000326 - leaf color","PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA187","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os07g04980",{"$nulls":6},"MIR398A","miR398a, osa-miR398a, osa-MIR398a","MICRORNA398A","MICRORNA398a, osa-miRNA398a",10," Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex","TO:0000149 - seed width, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000592 - 1000-dehulled grain weight",{"$nulls":9},"GRAS16","AM18, OsAM1, OsGRAS-16, OsGRAS16, GRAS-16, PsiOsGRAS4, PsiGRAS4","GRAS PROTEIN 16","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 18, GRAS protein 16",3," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0044403 - symbiosis, encompassing mutualism through parasitism","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,null,"LOC_Os03g40080",null,"Os03g0128700","Os05g0415200",1.5649118,0,null,"AAP6","OsAAP6, OsAAP1, AAP1","AMINO ACID PERMEASE 6","amino acid permease 6, amino acid permease 1, amino acid/auxin permease 1",7," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0009736 - cytokinin mediated signaling, GO:0006865 - amino acid transport, GO:0005886 - plasma membrane, GO:0009734 - auxin mediated signaling pathway, GO:0015804 - neutral amino acid transport, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0006807 - nitrogen compound metabolic process, GO:0031965 - nuclear membrane, GO:0015171 - amino acid transmembrane transporter activity, GO:0045927 - positive regulation of growth","TO:0000449 - grain yield per plant, TO:0002673 - amino acid content, TO:0006002 - proline content, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000329 - tillering ability","PO:0004709 - axillary bud , PO:0025034 - leaf , PO:0000025 - root tip , PO:0020121 - lateral root , PO:0020104 - leaf sheath , PO:0009047 - stem , PO:0006016 - leaf epidermis , PO:0005020 - vascular bundle , PO:0005708 - cortex , PO:0009005 - root , PO:0009015 - portion of vascular tissue , PO:0000074 - parenchyma cell ","Os07g0134000","LOC_Os07g04180.2, LOC_Os07g04180.1"]
[{"$nulls":24},"Os09g0555100","Os06g0546500","Os06g0546500",4.1498275,0,null,"Os05g0396900",3.4651756,"Os08g0390600",-1.2177086,{"$nulls":29},"D42","d42, dwf31","DWARF LIGULELESS","liguleless dwarf, dwarf-42",4," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000576 - stem length, TO:0000235 - liguleless, TO:0000024 - ligule length, TO:0000299 - leaf lamina color, TO:0000370 - leaf width, TO:0000391 - seed size, TO:0000207 - plant height","PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0020105 - ligule ",{"$nulls":9},"_","OsSTA189","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0165200","LOC_Os07g07080.1",{"$nulls":6},"MIR1848","miR1848, osa-miR1848, osa-MIR1848","MICRORNA1848","MICRORNA1848, osa-miRNA1848",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009651 - response to salt stress, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0009414 - response to water deprivation, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0007623 - circadian rhythm","TO:0000053 - pollen sterility, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0006031 - inflorescence size, TO:0000445 - seed number, TO:0000207 - plant height",{"$nulls":9},"GRAS17","OsSCL14, SCL14, OsGRAS-17, OsGRAS17, GRAS-17, DLN96, OsDLN96, OsGRAS15, GRAS15","GRAS PROTEIN 17","GRAS protein 17, DLN repressor 96, DLN motif protein 96",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0690600","LOC_Os03g48450.2, LOC_Os03g48450.3, LOC_Os03g48450.4, LOC_Os03g48450.1",null,"Os01g0719100","Os11g0107266",1.5561868,0,null,"AAP12A","OsAAP12A, OsAAP3, AAP3","AMINO ACID PERMEASE 12A","amino acid permease 12A, amino acid permease 3, amino acid/auxin permease 3",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Lesion mimic,  Character as QTL - Yield and productivity","GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0010109 - regulation of photosynthesis, GO:0015809 - arginine transport, GO:0010941 - regulation of cell death, GO:0010150 - leaf senescence, GO:0015171 - amino acid transmembrane transporter activity","TO:0000152 - panicle number, TO:0002673 - amino acid content, TO:0000249 - leaf senescence, TO:0000063 - mimic response, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000227 - root length, TO:0000084 - root number, TO:0000329 - tillering ability, TO:0000396 - grain yield","PO:0001054 - 4 leaf senescence stage ","Os06g0556000","LOC_Os06g36180.1"]
[{"$nulls":24},"Os01g0231000","Os03g0233000","Os03g0233000",4.0902686,0,null,"Os01g0805900",3.4639034,"Os11g0699532",-1.2167666,{"$nulls":29},"D3","d3, dwf3, D3/OsMAX2, Os_F0760, SOL1, OsORE9, ORE9, MAX2, OsRFPH2-10, RFPH2-10, OsD3","DWARF BUNKETSUWAITO TILLERING","bunketsuwaito tillering dwarf, dwarf-3, F-box/LRR-repeat MAX2 homolog, F-box and leucine-rich repeat MAX2 homolog, DWARF 3, DWARF-3, suppressor of lazy1, DWARF3, ORESARA 9, MAX2 ortholog",6," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042594 - response to starvation, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0009926 - auxin polar transport, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009755 - hormone-mediated signaling, GO:0009851 - auxin biosynthetic process, GO:0010016 - shoot morphogenesis, GO:0010223 - secondary shoot formation, GO:0009959 - negative gravitropism, GO:0009646 - response to absence of light, GO:0009416 - response to light stimulus, GO:0009934 - regulation of meristem structural organization, GO:0009610 - response to symbiotic fungus","TO:0000586 - seminal root length, TO:0000370 - leaf width, TO:0000460 - light intensity sensitivity, TO:0002672 - auxin content, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000011 - nitrogen sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000077 - shoot anatomy and morphology trait, TO:0001013 - lateral root number, TO:0000152 - panicle number, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0002693 - gravity response trait, TO:0000544 - mesocotyl length, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0006036 - stem elongation, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ","Os06g0154200","LOC_Os06g06050.1",{"$nulls":7},"_","OsSTA190","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os07g07130",{"$nulls":6},"FLO11","OsHsp70CP2, HSP70CP2, OsFLO11, OsFLO11-2, FLO11-2, cpHSP70-2, OsHsp70cp-2, Hsp70cp-2","FLOURY ENDOSPERM 11","heat shock protein 70 chloroplast protein 2, HEAT SHOCK PROTEIN 70KD CHLOROPLAST PROTEIN 2, FLOURY ENDOSPERM11-2, plastid HSP70-2, plastid-localized 70-kDa heat shock protein 2",12," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009941 - chloroplast envelope, GO:0009570 - chloroplast stroma, GO:0005739 - mitochondrion, GO:0009960 - endosperm development, GO:0009660 - amyloplast organization, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0045036 - protein targeting to chloroplast, GO:0006457 - protein folding, GO:0005524 - ATP binding, GO:0009579 - thylakoid","TO:0000259 - heat tolerance, TO:0000266 - chalky endosperm","PO:0007633 - endosperm development stage ","Os12g0244100","LOC_Os12g14070.1",{"$nulls":6},"GRAS19","OsSCRL, SCRL, Os-SCL7, OsSCL7, SCL7, OsGRAS-19, OsGRAS19, GRAS-19, OsGRAS18, GRAS18","GRAS PROTEIN 19","SCARECROW-LIKE7, SCARECROW-LIKE 7, GRAS protein 19",3," Tolerance and resistance - Disease resistance,  Other","GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0723000","LOC_Os03g51330.1",null,"Os01g0593200","Os03g0776000",1.5541258,0,null,"AAP10B","OsAAP10B, OsAAP4, AAP4, OsAAP4a, OsAAP4b, OsAAP4c","AMINO ACID PERMEASE 10B","amino acid permease 10B, amino acid permease 4, amino acid/auxin permease 4",12," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009736 - cytokinin mediated signaling, GO:0009734 - auxin mediated signaling pathway, GO:0006807 - nitrogen compound metabolic process, GO:0015804 - neutral amino acid transport, GO:0016021 - integral to membrane, GO:0015171 - amino acid transmembrane transporter activity","TO:0000396 - grain yield, TO:0000442 - plant fresh weight, TO:0006002 - proline content, TO:0000571 - shoot fresh weight, TO:0000457 - total biomass yield, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000329 - tillering ability, TO:0000357 - growth and development trait, TO:0002673 - amino acid content","PO:0009047 - stem , PO:0005417 - phloem , PO:0005352 - xylem , PO:0000258 - root cortex , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0000055 - bud , PO:0020121 - lateral root , PO:0000025 - root tip , PO:0025034 - leaf , PO:0009005 - root ","Os12g0194900","LOC_Os12g09300.3, LOC_Os12g09300.2, LOC_Os12g09300.1"]
[{"$nulls":24},"Os07g0517900","Os01g0729600","Os01g0729600",4.027969,0,null,"Os01g0719600",3.4606495,"Os06g0687700",-1.2162161,{"$nulls":29},"BC2","bc2, bc-2","BRITTLE CULM 2","brittle culm2, brittle culm 2, brittle culm-2",5," Vegetative organ - Culm","GO:0031225 - anchored to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005886 - plasma membrane, GO:0009531 - secondary cell wall, GO:0009808 - lignin metabolic process, GO:0009834 - secondary cell wall biogenesis","TO:0000051 - stem strength, TO:0000108 - leaf shattering, TO:0000061 - node shattering","PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA191","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0175400","LOC_Os07g07910.1",{"$nulls":6},"MIR1432","miR1432, osa-miR1432, osa-miR1432-5p, osa-MIR1432","MICRORNA1432","MICRORNA1432, osa-miRNA1432",7," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0046686 - response to cadmium ion, GO:0002238 - response to molecule of fungal origin, GO:0052542 - callose deposition during defense response, GO:0042742 - defense response to bacterium, GO:0080050 - regulation of seed development, GO:0010200 - response to chitin, GO:0035195 - gene silencing by miRNA, GO:0002237 - response to molecule of bacterial origin, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000074 - blast disease, TO:0002667 - abscisic acid content, TO:0000149 - seed width, TO:0000605 - hydrogen peroxide content, TO:0000304 - seed thickness, TO:0000396 - grain yield, TO:0002672 - auxin content, TO:0000371 - yield trait, TO:0000152 - panicle number, TO:0000175 - bacterial blight disease resistance",{"$nulls":9},"SHR1","OsSHR1, OsGRAS-38, OsGRAS38, GRAS-38, GRAS38, DLN189, OsDLN189, OsSHR, SHR","SHORT ROOT GENE 1","rice SHORT  ROOT gene1, SHORT-ROOT 1, SHORTROOT1, SHORT-ROOT protein 1, GRAS protein 38, DLN repressor 189, DLN motif protein 189",7," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0010078 - maintenance of root meristem identity, GO:0010082 - regulation of root meristem growth, GO:0010073 - meristem maintenance, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0007275 - multicellular organismal development, GO:0045449 - regulation of transcription, GO:0048364 - root development, GO:0010374 - stomatal complex development","TO:0006001 - salt tolerance, TO:0000255 - sheath blight disease resistance, TO:0000207 - plant height, TO:0000227 - root length, TO:0000329 - tillering ability, TO:0002692 - root meristem development, TO:0000166 - gibberellic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000656 - root development trait, TO:0000566 - stomatal frequency","PO:0009005 - root , PO:0006085 - root meristem , PO:0000258 - root cortex , PO:0007520 - root development stage ","Os07g0586900","LOC_Os07g39820.1",null,"Os03g0305800","Os10g0203000",1.5476494,0,null,"AAP10C","OsAAP10C, OsAAP5, AAP5","AMINO ACID PERMEASE 10C","amino acid permease 10C, amino acid permease 5, amino acid/auxin permease 5",1," Biochemical character,  Character as QTL - Yield and productivity","GO:0015809 - arginine transport, GO:0015819 - lysine transport, GO:0032328 - alanine transport, GO:0015829 - valine transport, GO:0005886 - plasma membrane, GO:0015171 - amino acid transmembrane transporter activity, GO:0009736 - cytokinin mediated signaling, GO:0016021 - integral to membrane","TO:0002673 - amino acid content, TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0002660 - cytokinin content","PO:0009015 - portion of vascular tissue ","Os01g0878400","LOC_Os01g65660.2, LOC_Os01g65660.1"]
[{"$nulls":24},"Os01g0279100","Os02g0285300","Os02g0285300",4.0003457,0,null,"Os02g0669000",3.4573658,"Os01g0189800",-1.2123436,{"$nulls":29},"ER","er(o), o, er","ERECT GROWTH HABIT","erect growth habit",5," Vegetative organ - Culm","GO:0040007 - growth","TO:0000427 - culm angle","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA194","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0461500","LOC_Os07g27750.1",{"$nulls":6},"MIR5144","miR5144, osa-miR5144, osa-MIR5144, MIR5144-5p, MIR5144-3posa-miR5144-3p osa-miR5144-5p","MICRORNA5144","MICRORNA5144, osa-miRNA5144, MicroRNA5144-3p",1," Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009408 - response to heat, GO:0010229 - inflorescence development, GO:0046689 - response to mercury ion, GO:0055122 - response to very low light intensity stimulus, GO:0048316 - seed development, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0000382 - 1000-seed weight, TO:0000653 - seed development trait, TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000621 - inflorescence development trait, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009047 - stem ",{"$nulls":8},"SCR1","OsSCR1, OsSCR, OsGRAS-41, OsGRAS41, GRAS-41, GRAS41","SCARECROW 1","GRAS protein 41",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0010374 - stomatal complex development, GO:0010440 - stomatal lineage progression","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000566 - stomatal frequency",null,"Os11g0124300","LOC_Os11g03110.1",null,"Os01g0602800","Os01g0383900",1.5468973,0,null,"RLCK103","GUDK, OsRLCK103","RECEPTOR-LIKE CYTOPLASMIC KINASE 103","GROWTH UNDER DROUGHT KINASE, Receptor-like Cytoplasmic Kinase 103",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0179400","LOC_Os03g08170.1"]
[{"$nulls":24},"Os10g0450000","Os03g0265900","Os03g0265900",3.8696945,0,null,"Os02g0640300",3.455829,"Os06g0708500",-1.2119535,{"$nulls":29},"EUI1","eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, OsEUI","ELONGATED UPPERMOST INTERNODE 1","elongated uppermost internode, elongated uppermost internode-1, Elongation of Upper most Internode, ELONGATED UPPERMOST INTERNODE1, dwarf Eui1",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0009826 - unidimensional cell growth, GO:0009651 - response to salt stress, GO:0022900 - electron transport chain, GO:0007275 - multicellular organismal development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0004497 - monooxygenase activity, GO:0009685 - gibberellin metabolic process, GO:0010106 - cellular response to iron ion starvation, GO:0010229 - inflorescence development, GO:0045487 - gibberellin catabolic process, GO:0032940 - secretion by cell","TO:0000621 - inflorescence development trait, TO:0000145 - internode length, TO:0002675 - gibberellic acid content, TO:0000576 - stem length, TO:0000224 - iron sensitivity, TO:0000207 - plant height, TO:0001002 - inflorescence exsertion, TO:0000040 - panicle length, TO:0006001 - salt tolerance","PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0007089 - stem elongation stage , PO:0007112 - 1 main shoot growth stage , PO:0001083 - inflorescence development stage ","Os05g0482400","LOC_Os05g40384.1",{"$nulls":7},"_","OsSTA195","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0492900","LOC_Os07g31070.1",{"$nulls":6},"LE","OsRHC1, RHC1, OsLE","LARGE EMBRYO","RING-HC protein 1, large embryo",3," Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0005773 - vacuole","TO:0000113 - giant embryo","PO:0009010 - seed ","Os03g0706900 ","LOC_Os03g49900.1",{"$nulls":6},"GRAS37","OsGRAS-37, OsGRAS37, GRAS-37, OsGRAS35, GRAS35","GRAS PROTEIN 37","GRAS protein 37",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance",null,"Os07g0589200","LOC_Os07g40020.1",null,"Os07g0545800","Os07g0637000",1.524336,0,null,"_","OsGME1, GME1","_","GDP-D-mannose-3', 5'-epimerase 1, GDP-D-mannose epimerase 1",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0010043 - response to zinc ion, GO:0050662 - coenzyme binding, GO:0047918 - GDP-mannose 3,5-epimerase activity, GO:0019853 - L-ascorbic acid biosynthetic process, GO:0050832 - defense response to fungus","TO:0000448 - filled grain percentage, TO:0000371 - yield trait, TO:0000382 - 1000-seed weight, TO:0000436 - spikelet sterility, TO:0000074 - blast disease, TO:0000351 - zinc sensitivity",null,"Os10g0417600","LOC_Os10g28200.1, LOC_Os10g28200.2"]
[{"$nulls":24},"Os04g0630100","Os01g0216000","Os01g0216000",3.8623073,0,null,"Os03g0722500",3.4546604,"Os05g0522600",-1.2118931,{"$nulls":29},"SD7","sd7, sd7(t)","SEMIDWARF 7","semidwarf7 (D5631), semidwarf-7(D65-31), semidwarf-7, semidwarf 7",5," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000145 - internode length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA196","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0501700","LOC_Os07g31830.1",{"$nulls":6},"GW6","OsGSR1, GSR1, OsGASR7, GASR7, OsGW6, OsGASR7/GW6","GRAIN WIDTH 6","GAST family gene in rice 1, GA-stimulated transcript family gene in rice 1, gibberellic acid- stimulated regulator 7",6," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0030307 - positive regulation of cell growth, GO:0009739 - response to gibberellin stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0016132 - brassinosteroid biosynthetic process, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000734 - grain length, TO:0000397 - grain size, TO:0002676 - brassinosteroid content, TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002675 - gibberellic acid content, TO:0000206 - leaf angle",null,"Os06g0266800","LOC_Os06g15620.1",{"$nulls":6},"GRAS42","OsGRAS-42, OsGRAS42, GRAS-42, PsiOsGRAS8, PsiGRAS8","GRAS PROTEIN 42","GRAS protein 42",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os11g0139600","LOC_Os11g04400.1",null,"Os01g0674500","Os03g0294700",1.5126151,0,null,"GL3.2","GL3.2","GRAIN LENGTH 3.2","Grain Length 3.2",3," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0080113 - regulation of seed growth","TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000734 - grain length, TO:0000391 - seed size",null,"Os03g0417700","LOC_Os03g30420.1"]
[{"$nulls":24},"Os01g0136100","Os06g0142300","Os06g0142300",3.8547497,0,null,"Os01g0601675",3.454601,"Os06g0659100",-1.209332,{"$nulls":29},"SDG","sdg*, sd11","SEMIDWARF(BRGPC)","semidwarf (BRGPC), semidwarf(BRGPC), semidwarf-11, SEMIDWARF",5," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA197","_",null,7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0513400","LOC_Os07g32920.1",{"$nulls":6},"TID1","OsTID1, TubA2, SRS5, OS-TubA2, OsTubA2, OsSRS5","TWISTED DWARF 1","TWISTED DWARF1, Tubulin alpha-2, Tubulin alpha-2 chain, small and round seed 5",11," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003924 - GTPase activity, GO:0009635 - response to herbicide, GO:0046688 - response to copper ion, GO:0007017 - microtubule-based process, GO:0005874 - microtubule, GO:0005737 - cytoplasm, GO:0051510 - regulation of unidimensional cell growth, GO:0005525 - GTP binding, GO:0005200 - structural constituent of cytoskeleton, GO:0051258 - protein polymerization","TO:0000021 - copper sensitivity, TO:0000058 - herbicide sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000391 - seed size",null,"Os11g0247300","LOC_Os11g14220.1",{"$nulls":6},"GRAS45","OsGRAS-45, OsGRAS45, GRAS-45, DLN246, OsDLN246, OsGRAS41, GRAS41","GRAS PROTEIN 45","GRAS protein 45, DLN repressor 246, DLN motif protein 246",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os11g0160550/Os11g0160600","LOC_Os11g06180.1",null,"Os01g0837900","Os07g0168600",1.5103464,0,null,"CEP6","OsCEP6, OsCEP6.1, CEP6.1, OsCEP13, CEP13","C-TERMINALLY ENCODED PEPTIDE 6","C-terminally encoded peptide 13",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0080050 - regulation of seed development, GO:0048364 - root development, GO:0010229 - inflorescence development, GO:0048831 - regulation of shoot development, GO:0008361 - regulation of cell size, GO:0009414 - response to water deprivation, GO:0006995 - cellular response to nitrogen starvation, GO:0046686 - response to cadmium ion","TO:0000654 - shoot development trait, TO:0000402 - grain width, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000382 - 1000-seed weight, TO:0000149 - seed width, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000734 - grain length","PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os08g0475500","LOC_Os08g37070.1"]
[{"$nulls":24},"Os01g0305900","Os12g0503000","Os12g0503000",3.6242936,0,null,"Os01g0281600",3.4497578,"Os03g0270500",-1.2082967,{"$nulls":29},"BC4","bc4, bc-4","BRITTLE CULM 4","brittle culm4, brittle culm 4, brittle culm-4",6," Vegetative organ - Culm","GO:0009834 - secondary cell wall biogenesis, GO:0009808 - lignin metabolic process, GO:0009531 - secondary cell wall, GO:0005886 - plasma membrane, GO:0031225 - anchored to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000108 - leaf shattering, TO:0000051 - stem strength, TO:0000061 - node shattering","PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA198, STA198, OsFH11, FH11","_","formin homology 11, forming family protein 11, FH2 protein 11, FH2 domain protein 11",7," Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0016020 - membrane",null,"PO:0009066 - anther ","Os07g0545500","LOC_Os07g36150.1",{"$nulls":6},"LAX2","OsLAX2, Gnp4/LAX2, Gnp4","LAX PANICLE 2","lax panicle2, Grain number per-panicle 4",4," Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0030307 - positive regulation of cell growth","TO:0000163 - auxin sensitivity, TO:0000152 - panicle number, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000734 - grain length, TO:0000382 - 1000-seed weight",null,"Os04g0396500","LOC_Os04g32510.1",{"$nulls":6},"CIGR1","OsCIGR1, OsGRAS-34, OsGRAS34, GRAS-34, GRAS34","CHITIN INDUSIBLE GIBBERELLIN RESPONSIVE GENE 1","Chitin-inducible gibberellin-responsive protein 1, Chitin-inducible GA-responsive protein, GRAS protein 34",7," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0045449 - regulation of transcription, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0009409 - response to cold","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance","PO:0025034 - leaf ","Os07g0545800","LOC_Os07g36170.1, LOC_Os07g36170.2",null,"Os01g0332900","Os01g0147900",1.4986433,0,null,"_","OsPP23, PP23, PKG, OsPKG","_","Protein phosphatase 23, cGMP-Dependent Protein Kinase",2," Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0046872 - metal ion binding, GO:0048316 - seed development, GO:0005952 - cAMP-dependent protein kinase complex, GO:0005886 - plasma membrane, GO:0009740 - gibberellic acid mediated signaling, GO:0019934 - cGMP-mediated signaling, GO:0006470 - protein amino acid dephosphorylation, GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009651 - response to salt stress, GO:0004722 - protein serine/threonine phosphatase activity, GO:0009845 - seed germination, GO:0005524 - ATP binding, GO:0008603 - cAMP-dependent protein kinase regulator activity, GO:0000003 - reproduction","TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000145 - internode length, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000590 - grain weight, TO:0000430 - germination rate, TO:0000166 - gibberellic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os02g0281000","LOC_Os02g17970.2, LOC_Os02g17970.1"]
[{"$nulls":24},"Os06g0640800","Os01g0719300","Os01g0719300",3.612622,0,null,"Os03g0654900",3.4481661,"Os01g0833700",-1.2082494,{"$nulls":29},"D21","d21, dwf18","DWARF AOMORIMOCHI-14","aomorimochi-14 dwarf, dwarf-21",6," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000484 - seed shape, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000040 - panicle length","PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"GATL4","OsSTA200, OsGATL4","GALACTURONOSYLTRANSFERASE-LIKE 4","galacturonosyltransferase-like 4",7," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os07g0646800","LOC_Os07g45260.1",{"$nulls":6},"PIL16","APG, OsPIL16, OsbHLH106","_","ANTAGONIST OF PGL1, PHYTOCHROME INTERACTING FACTOR-LIKE 16, basic helix-loop-helix protein 106",5," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009959 - negative gravitropism, GO:0032956 - regulation of actin cytoskeleton organization, GO:0009416 - response to light stimulus, GO:0032922 - circadian regulation of gene expression","TO:0000734 - grain length, TO:0000075 - light sensitivity, TO:0002756 - shoot habit",null,"Os05g0139100","LOC_Os05g04740.2, LOC_Os05g04740.1",{"$nulls":6},"CIGR2","OsCIGR2, OsGRAS-36, OsGRAS36, GRAS-36, GRAS36","CHITIN INDUSIBLE GIBBERELLIN RESPONSIVE GENE 2","Chitin-inducible gibberellin-responsive protein 2, GA response modulator protein, GRAS protein 36",7," Tolerance and resistance - Disease resistance,  Other","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009814 - defense response, incompatible interaction, GO:0009817 - defense response to fungus, incompatible interaction, GO:0045449 - regulation of transcription","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance","PO:0025034 - leaf ","Os07g0583600","LOC_Os07g39470.1",null,"Os02g0777800","Os11g0572500",1.494246,0,null,"_","OsMED9, MED9, OsMED9_1, MED9_1","_","Mediator complex protein OsMED9, Mediator 9_1",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000396 - grain yield, TO:0000382 - 1000-seed weight",null,"Os01g0501000","LOC_Os01g31629.1, LOC_Os01g31629.2, LOC_Os01g31629.3"]
[{"$nulls":24},"Os03g0118600","Os03g0233900","Os03g0233900",3.5551937,0,null,"Os11g0106900",3.447841,"Os04g0599000",-1.2069334,{"$nulls":29},"DW1","dw1(fh1), fh1, dw1","DEEP WATER TOLERANCE 1","deep water tolerance1, deep water tolerance 1, deep water tolerance-1",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding","TO:0000170 - elongation ability, TO:0000103 - deepwater stress","PO:0000003 - whole plant ",{"$nulls":9},"BMY7","OsSTA201, OsBmy7, Bmy7","BETA-AMYLASE 7","beta-amylase",7," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016161 - beta-amylase activity, GO:0000272 - polysaccharide catabolic process",null,"PO:0009066 - anther ","Os07g0667100","LOC_Os07g47120.1",{"$nulls":6},"_",null,"_","Prolamine 7",5," Seed - Physiological traits - Storage substances","GO:0005773 - vacuole, GO:0045735 - nutrient reservoir activity, GO:0033095 - aleurone grain",null,null,"Os05g0329100|Os05g0329300|Os05g0329350","LOC_Os05g26377.1, LOC_Os05g26386.1",{"$nulls":6},"GRAS28","OsGRAS-28, OsGRAS28, GRAS-28, OsGRAS25, GRAS25","GRAS PROTEIN 28","GRAS protein 28",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0485400","LOC_Os05g40710.1",null,"Os04g0604300","Os02g0325600",1.4843365,0,null,"RLCK107","OsRLCK107","RECEPTOR-LIKE CYTOPLASMIC KINASE 107","Receptor-like Cytoplasmic Kinase 107",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0010200 - response to chitin, GO:0032494 - response to peptidoglycan, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000445 - seed number, TO:0000346 - tiller number, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os03g0274800","LOC_Os03g16740.1, LOC_Os03g16740.2"]
[{"$nulls":24},"Os01g0566701","Os03g0855100","Os03g0855100",3.5127227,0,null,"Os10g0492600",3.433717,"Os02g0199200",-1.2066263,{"$nulls":29},"FC2","fc2","FINE CULM 2","fine culm2, fine culm 2, fine culm-2",6," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000339 - stem thickness, TO:0000346 - tiller number","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA203","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0130000","LOC_Os08g03600.1",{"$nulls":6},"PIL11","OsPIL11, OsbHLH102, bHLH102, PIF4, OsPIF4","_","PHYTOCHROME INTERACTING FACTOR-LIKE 11, basic helix-loop-helix protein 102, Phytochrome interacting factor 4",12," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009628 - response to abiotic stimulus, GO:0003677 - DNA binding, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000397 - grain size, TO:0002616 - flowering time, TO:0000168 - abiotic stress trait, TO:0000734 - grain length, TO:0000396 - grain yield",null,"Os12g0610200","LOC_Os12g41650.5, LOC_Os12g41650.4, LOC_Os12g41650.3, LOC_Os12g41650.2",{"$nulls":6},"GRAS35","OsGRAS-35, OsGRAS35, GRAS-35, OsGRAS32, GRAS32","GRAS PROTEIN 35","GRAS protein 35",7," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus, GO:0048366 - leaf development","TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity",null,"Os07g0567700","LOC_Os07g38030.1",null,"Os07g0683900","Os09g0555500",1.4703366,0,null,"RLCK118","OsRLCK118","RECEPTOR-LIKE CYTOPLASMIC KINASE 118","Receptor-like Cytoplasmic Kinase 118",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0042742 - defense response to bacterium, GO:0052033 - pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity, GO:0010200 - response to chitin, GO:0004674 - protein serine/threonine kinase activity, GO:0032494 - response to peptidoglycan, GO:0002237 - response to molecule of bacterial origin, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0043067 - regulation of programmed cell death, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus","TO:0000050 - inflorescence branching, TO:0000175 - bacterial blight disease resistance, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000445 - seed number, TO:0002677 - brassinosteroid sensitivity",null,"Os03g0821900","LOC_Os03g60710.1"]
[{"$nulls":24},"Os11g0610900","Os10g0161400","Os10g0161400",3.5092266,0,null,"Os01g0508500",3.4293993,"Os11g0191300",-1.2058611,{"$nulls":29},"RCN5","rcn5","REDUCED CULM NUMBER 5","reduced culm number-5",6," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development, GO:0009266 - response to temperature stimulus","TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000432 - temperature response trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA204","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os08g04000",{"$nulls":6},"PIL15","OsPIL15, OsbHLH105, PIF3, OsPIF3","PHYTOCHROME INTERACTING FACTOR-LIKE 15","phytochrome-interacting factor-like protein 15, Phytochrome interacting factor 3",1," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009734 - auxin mediated signaling pathway, GO:0009416 - response to light stimulus, GO:0009640 - photomorphogenesis, GO:0009958 - positive gravitropism, GO:0051302 - regulation of cell division, GO:0009629 - response to gravity, GO:0010184 - cytokinin transport, GO:0009832 - plant-type cell wall biogenesis, GO:0005634 - nucleus, GO:0009639 - response to red or far red light, GO:0032922 - circadian regulation of gene expression, GO:0009664 - plant-type cell wall organization","TO:0000590 - grain weight, TO:0000557 - secondary branch number, TO:0000163 - auxin sensitivity, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000567 - tiller angle",null,"Os01g0286100",{"$nulls":7},"GRAS31","OsGRAS-31, OsGRAS31, GRAS-31, OsGRAS28, GRAS28","GRAS PROTEIN 31","GRAS protein 31",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009049 - inflorescence , PO:0009046 - flower , PO:0009005 - root ","Os06g0105350","LOC_Os06g01620.1",null,"Os02g0760000","Os05g0551000",1.4402326,0,null,"PFT1","OsPFT1, OsMED25_1, MED25_1, OsMED25, MED25","PHYTOCHROME AND FLOWERING TIME 1","Mediator 25_1, mediator subunit 25",9," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010076 - maintenance of floral meristem identity, GO:0009737 - response to abscisic acid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009741 - response to brassinosteroid stimulus, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0009908 - flower development, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus","TO:0000734 - grain length, TO:0000148 - viral disease resistance, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0020105 - ligule , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0007615 - flower development stage ","Os09g0306700","LOC_Os09g13610.3, LOC_Os09g13610.1"]
[{"$nulls":24},"Os03g0592500","Os12g0176300","Os12g0176300",3.4923658,0,null,"Os06g0600700",3.4282866,"Os06g0624900",-1.2052364,{"$nulls":29},"D4","d4, dwf4","DWARF BUNKETSUWAITO TILLERING","bunketsuwaito tillering dwarf, dwarf-4",6," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000370 - leaf width","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA205","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0149000","LOC_Os08g05340.1",{"$nulls":6},"RSUS5","SUS5, SS5, OsScS5, RSs5, RSus5, OsSUS5","SUCROSE SYNTHASE 5","Rice sucrose synthase-5, Sucrose synthase 5, Sucrose-UDP glucosyltransferase 5, Sucrose synthase-5, rice SuSy gene 5",4," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005985 - sucrose metabolic process, GO:0016020 - membrane, GO:0051781 - positive regulation of cell division, GO:0009058 - biosynthetic process, GO:0016157 - sucrose synthase activity, GO:0005737 - cytoplasm","TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000396 - grain yield, TO:0000696 - starch content, TO:0000590 - grain weight",null,"Os04g0309600","LOC_Os04g24430.1",{"$nulls":6},"HAM1","OsSCL1, SCL1, OsHAM1, OsGRAS-9, OsGRAS-9, GRAS-9, GRAS9, OsGRAS8, GRAS8","HAIRY MERISTEM 1","SCARECROW-LIKE 1, hairy meristem 1, GRAS protein 9",2," Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Other","GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase","TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0006020 - shoot apical meristem development, TO:0006021 - vegetative to reproductive phase transition trait","PO:0020148 - shoot apical meristem ","Os02g0662700","LOC_Os02g44360.1",null,"Os04g0572400","Os07g0490400",1.4379339,0,null,"NRFG5","OsRH51, RH51, OsNRFG5","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 5","RNA helicase 51, neo-tetraploid rice fertility related gene 5",6," Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0003723 - RNA binding, GO:0004386 - helicase activity, GO:0005524 - ATP binding","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000371 - yield trait, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000455 - seed set percent",null,"Os06g0535100","LOC_Os06g34420.1"]
[{"$nulls":24},"Os02g0101400","Os01g0805900","Os01g0805900",3.4639034,0,null,"Os09g0569700",3.4275181,"Os06g0159900",-1.2050422,{"$nulls":29},"SE1","Se1(Lm,Lf,Rs,Fl), se(t), Hd1, HD1, Fl, Lm, Se1, K, Rs, Lf, Se-1, Hd1(t), qHD1(t), OsA, OsBBX18, BBX18, Hd1/OsA, OsCCT21, CCT21","PHOTOSENSITIVITY 1","Photosensitivity1, Photosensitivity 1, Photoperiod sensitivity 1, Heading date, Photoperiod-sensitivity-1, HEADING DATE 1, Arabidopsis CONSTANS(CO) gene ortholog, ortholog of Arabidopsis CONSTANS, B-box-containing protein 18, CCT domain-containing gene 21, CCT (CO, CO-LIKE and TOC1) domain protein 21, CCT domain protein 21",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0030154 - cell differentiation, GO:0009648 - photoperiodism, GO:0008270 - zinc ion binding, GO:0009266 - response to temperature stimulus, GO:0009908 - flower development, GO:0048571 - long-day photoperiodism, GO:0007623 - circadian rhythm, GO:0048572 - short-day photoperiodism, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009909 - regulation of flower development, GO:0010229 - inflorescence development","TO:0002759 - grain number, TO:0002616 - flowering time, TO:0000229 - photoperiod sensitivity, TO:0000075 - light sensitivity, TO:0000050 - inflorescence branching, TO:0000371 - yield trait, TO:0000448 - filled grain percentage, TO:0006032 - panicle size, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000469 - days to maturity, TO:0000432 - temperature response trait","PO:0009013 - portion of meristem tissue , PO:0009082 - spikelet floret , PO:0009025 - vascular leaf , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0025034 - leaf , PO:0007616 - flowering stage ","Os06g0275000","LOC_Os06g16370.1",{"$nulls":7},"_","OsSTA206","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0199200","LOC_Os08g09930.1",{"$nulls":6},"RSUS6","SUS6, SS6, OsScS6, RSs6, RSus6, OsSUS6","SUCROSE SYNTHASE 6","Rice sucrose synthase-6, Sucrose synthase 6, Sucrose-UDP glucosyltransferase 6, Sucrose synthase-6, rice SuSy gene 6",2," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009058 - biosynthetic process, GO:0051781 - positive regulation of cell division, GO:0005985 - sucrose metabolic process, GO:0016157 - sucrose synthase activity","TO:0000590 - grain weight, TO:0000396 - grain yield, TO:0000592 - 1000-dehulled grain weight, TO:0000449 - grain yield per plant, TO:0000696 - starch content",null,"Os02g0831500","LOC_Os02g58480.1",{"$nulls":6},"GRAS3","SCL1, OsSCL1, OsGRAS-3, OsGRAS3, GRAS-3","GRAS PROTEIN 3","Arabidopsis thaliana scarecrow-like 1, GRAS protein 3",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0050832 - defense response to fungus, GO:0009266 - response to temperature stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent","TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait","PO:0025034 - leaf ","Os01g0881500","LOC_Os01g65900.1",null,"Os06g0153000","Os05g0472700",1.4316384,0,null,"NRFG4","OsRH52A, RH52A, OsNRFG4","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 4","RNA helicase 52A, neo-tetraploid rice fertility related gene 4",6," Vegetative organ - Culm,  Reproductive organ,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004386 - helicase activity, GO:0003723 - RNA binding, GO:0005524 - ATP binding","TO:0000152 - panicle number, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000421 - pollen fertility","PO:0020094 - plant egg cell ","Os06g0602400","LOC_Os06g40020.1"]
[{"$nulls":24},"Os01g0238500","Os02g0640300","Os02g0640300",3.455829,0,null,"Os03g0781400",3.426588,"Os03g0158500",-1.2037576,{"$nulls":29},"D9","d9, dwf8","DWARF CHINESE","Chinese dwarf, dwarf-9",6," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA209","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0324200","LOC_Os08g23460.1",{"$nulls":6},"PPR676","OsPPR676, OsATP4, ATP4","PENTATRICOPEPTIDE REPEAT PROTEIN 676","pentatricopeptide repeat protein 676",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009516 - leucoplast, GO:0009509 - chromoplast, GO:0009555 - pollen development, GO:0009657 - plastid organization, GO:0009409 - response to cold, GO:0016556 - mRNA modification, GO:0019252 - starch biosynthetic process, GO:0016051 - carbohydrate biosynthetic process, GO:0016554 - cytidine to uridine editing, GO:0006633 - fatty acid biosynthetic process, GO:0040007 - growth, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0048653 - anther development, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000135 - leaf length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000371 - yield trait, TO:0000370 - leaf width, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0000326 - leaf color, TO:0002714 - plastid development trait, TO:0000053 - pollen sterility","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0025313 - tapetum ","Os03g0215900","LOC_Os03g11670.1",{"$nulls":6},"GRAS2","OsGRAS-2, OsGRAS2, GRAS-2","GRAS PROTEIN 2","GRAS protein 2",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance","PO:0025034 - leaf ","Os01g0842200","LOC_Os01g62460.1, LOC_Os01g62460.2, LOC_Os01g62460.3",null,"Os03g0767800","Os09g0528200",1.4219437,0,null,"SE13","Se13, OsHY2, OsGUN3, GUN3, PS13","PHOTOSENSITIVITY 13","Genome uncoupled 3, Photoperiod-sensitivity-13",1," Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0010019 - chloroplast-nucleus signaling pathway, GO:0010024 - phytochromobilin biosynthetic process, GO:0050897 - cobalt ion binding, GO:0048543 - phytochrome chromophore biosynthetic process, GO:0050619 - phytochromobilin:ferredoxin oxidoreductase activity","TO:0000371 - yield trait, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number",null,"Os01g0949400","LOC_Os01g72090.2, LOC_Os01g72090.1"]
[{"$nulls":24},"Os03g0412800","Os11g0106900","Os11g0106900",3.447841,0,null,"Os05g0386800",3.421819,"Os06g0702700",-1.2020655,{"$nulls":29},"RCN1","rcn1","REDUCED CULM NUMBER 1","reduced culm number1, reduced culm number-1",6," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth, GO:0009266 - response to temperature stimulus, GO:0007275 - multicellular organismal development","TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000432 - temperature response trait","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA210","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0352250","LOC_Os08g26370.1",{"$nulls":6},"PSK3","OsPSK3, GREP2, OMT9, OsPSK5, PSK5","PHYTOSULFOKINE 3","phytosulfokine 3, Oryza miR164-targeted gene 9",12," Seed - Physiological traits","GO:0008283 - cell proliferation, GO:0030154 - cell differentiation, GO:0007275 - multicellular organismal development, GO:0005576 - extracellular region","TO:0000345 - seed viability",null,"Os12g0147800","LOC_Os12g05260.1",{"$nulls":6},"GRAS6","OsGRAS-6, OsGRAS6, GRAS-6, OsGRAS5, GRAS5","GRAS PROTEIN 6","GRAS protein 6",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0003712 - transcription cofactor activity, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os01g0948200","LOC_Os01g71970.1",null,"Os03g0734900","Os08g0235800",1.4134728,0,null,"MTD1","Osmtd1","MULTI-TILLERING AND DWARF 1","multi-tillering and dwarf mutant 1",8," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0009611 - response to wounding","TO:0000346 - tiller number, TO:0000207 - plant height",null,"Os08g0441300","LOC_Os08g34258.1"]
[{"$nulls":24},"Os08g0390200","Os05g0386800","Os05g0386800",3.421819,0,null,"Os07g0588800",3.4187508,"Os09g0501200",-1.2014208,{"$nulls":29},"D58","d58, dwf39","DWARF SMALL GRAINED","small grained dwarf, dwarf-58",6," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000391 - seed size, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA213","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0411500","LOC_Os08g31769.1, LOC_Os08g31769.2",{"$nulls":6},"_","Prol-19, OsEnS-94, RM1, pro13a.2, PROLM26","_","16 kDa major rice prolamin, endosperm-specific gene 94, Prolamin 26",7," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os07g0206500","LOC_Os07g10580.1",{"$nulls":6},"MPK6","OsMPK6, OsDR6, DR6, OsMPK4, MPK4, OsMAPK4, MAPK4","MITOGEN-ACTIVATED PROTEIN KINASE 6","mitogen-activated protein kinase 6, MAP kinase 4",10," Biochemical character,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0042539 - hypotonic salinity response, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009861 - jasmonic acid and ethylene-dependent systemic resistance, GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0000165 - MAPKKK cascade, GO:0009620 - response to fungus, GO:0080026 - response to indolebutyric acid stimulus, GO:0009411 - response to UV, GO:0009863 - salicylic acid mediated signaling pathway, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0006972 - hyperosmotic response, GO:0009734 - auxin mediated signaling pathway, GO:0043622 - cortical microtubule organization, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009751 - response to salicylic acid stimulus, GO:0009611 - response to wounding, GO:0002213 - defense response to insect","TO:0000276 - drought tolerance, TO:0002668 - jasmonic acid content, TO:0000454 - stem borer resistance, TO:0000160 - UV light sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0000175 - bacterial blight disease resistance","PO:0001170 - seed development stage ","Os10g0533600","LOC_Os10g38950.1",null,"Os05g0530500","Os04g0563900",1.4122585,0,null,"LPR5","OsSTA2, STA2, OsLPR5","LOW PHOSPHATE ROOT 5","Low Phosphate Root5, Low Phosphate Root 5",1," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048364 - root development, GO:0016036 - cellular response to phosphate starvation, GO:0005783 - endoplasmic reticulum, GO:0005618 - cell wall, GO:0004322 - ferroxidase activity, GO:0042594 - response to starvation, GO:0006817 - phosphate transport, GO:0055062 - phosphate ion homeostasis","TO:0000357 - growth and development trait, TO:0000371 - yield trait, TO:0000465 - mineral and ion content related trait, TO:0000656 - root development trait","PO:0007520 - root development stage , PO:0020141 - stem node , PO:0006012 - leaf collar , PO:0009066 - anther , PO:0009005 - root ","Os01g0127200","LOC_Os01g03640.1"]
[{"$nulls":24},"Os12g0113500","Os04g0188500","Os04g0188500",3.4129307,0,null,"Os02g0814400",3.4174197,"Os09g0501100",-1.2014208,{"$nulls":29},"D60","d60 (sd(t)), sd(t), dwf41, d60","DWARF HOKURIKU 100","dwarf (Hokuriku 100), dwarf-60",7," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000576 - stem length, TO:0000069 - variegated leaf","PO:0005005 - shoot internode , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA214","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0457000","LOC_Os08g35560.1",{"$nulls":6},"NAL21","cyc07, T151, OsNAL21, OsRPS3A, RPS3A, RPS3aA, OsRPS3aA","NARROW LEAF 21","narrow leaf21, ribosomal protein S3A",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009965 - leaf morphogenesis, GO:0010482 - regulation of epidermal cell division, GO:0009733 - response to auxin stimulus, GO:0003735 - structural constituent of ribosome, GO:0051302 - regulation of cell division, GO:0005783 - endoplasmic reticulum, GO:0005840 - ribosome, GO:0006413 - translational initiation, GO:0032790 - ribosome disassembly, GO:0042255 - ribosome assembly, GO:0001558 - regulation of cell growth, GO:0048366 - leaf development, GO:0045727 - positive regulation of translation, GO:0006412 - translation, GO:0022627 - cytosolic small ribosomal subunit","TO:0000470 - vascular tissue related trait, TO:0000146 - seed length, TO:0000040 - panicle length, TO:0000145 - internode length, TO:0000655 - leaf development trait, TO:0000163 - auxin sensitivity, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000135 - leaf length, TO:0000370 - leaf width","PO:0000055 - bud , PO:0000016 - lateral root primordium , PO:0000025 - root tip , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001050 - leaf development stage ","Os03g0200500","LOC_Os03g10340.1",{"$nulls":6},"MAPKKKEPSILON","OsMAPKKKepsilon, MAPKKKepsilon, OsMAPKKK24, MAPKKK24","MAPK KINASE KINASE EPSILON","MAPK kinase kinase epsilon, MAPK kinase kinase 24",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0000165 - MAPKKK cascade, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0007346 - regulation of mitotic cell cycle, GO:0031098 - stress-activated protein kinase signaling pathway, GO:0032147 - activation of protein kinase activity","TO:0000276 - drought tolerance, TO:0000074 - blast disease",null,"Os04g0660500","LOC_Os04g56530.1",null,"Os01g0559500","Os05g0553000",1.4122492,0,null,"_","Os_F0794, OsFBDUF48, FBDUF48, PEG3","_","paternally expressed gene 3",10," Seed - Morphological traits,  Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity",null,"TO:0000149 - seed width, TO:0000064 - embryo related trait, TO:0000696 - starch content, TO:0000382 - 1000-seed weight, TO:0000304 - seed thickness","PO:0009089 - endosperm ","Os10g0519800","LOC_Os10g37540.1"]
[{"$nulls":24},"Os02g0657000","Os10g0390500","Os10g0390500",3.2548683,0,null,"Os05g0313700",3.4170103,"Os01g0347200",-1.2003855,{"$nulls":29},"D7","d7, dwf7","DWARF HEIEIDAIKOKU OR CLEISTOGAMOUS","heieidaikoku or cleistogamous dwarf, dwarf-7",7," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000499 - flower anatomy and morphology trait, TO:0000089 - panicle type, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000207 - plant height, TO:0000474 - glume opening, TO:0000576 - stem length","PO:0009082 - spikelet floret , PO:0009037 - lemma , PO:0009038 - palea , PO:0009039 - glume , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"_","OsSTA215","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os08g35770",{"$nulls":6},"_","PG5b, Prol-08, pro13b.14","_",null,5," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os05g0329400","LOC_Os05g26440.1",{"$nulls":6},"MAPKKK2","OsMAPKKK2","MAPK KINASE KINASE 2","MAPK kinase kinase 2",10," Tolerance and resistance - Stress tolerance","GO:0007165 - signal transduction, GO:0004672 - protein kinase activity, GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os10g0430900","LOC_Os10g29540.1",null,"Os02g0815500","Os05g0162500",1.404242,0,null,"_","Os_F0701, OsAFB6, AFB6, OsAFB5, AFB5","_","Auxin-signaling F-Box 6, Auxin F-box protein 5, Auxin-signaling F-Box 5",3," Reproductive organ - Heading date,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0007623 - circadian rhythm, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0010081 - regulation of inflorescence meristem growth","TO:0006032 - panicle size, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0002660 - cytokinin content, TO:0002672 - auxin content, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000456 - spikelet number, TO:0000547 - primary branch number","PO:0020032 - plumule , PO:0020148 - shoot apical meristem , PO:0020003 - plant ovule , PO:0009073 - stigma , PO:0009049 - inflorescence ","Os03g0187500","LOC_Os03g08850.1"]
[{"$nulls":24},"Os05g0128900","Os02g0719600","Os02g0719600",3.2366645,0,null,"Os03g0170600",3.4161003,"Os03g0113700",-1.2001644,{"$nulls":29},"D6","d6(d34), d34, dwf6","DWARF EBISUMOCHI DWARF OR TANKANSHIRAZASA","ebisumochi dwarf or tankanshirazasa dwarf, dwarf-6",7," Vegetative organ - Culm","GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000089 - panicle type, TO:0000492 - leaf shape, TO:0000207 - plant height","PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"GAUT7","OsSTA216, OsGAUT7","GALACTURONOSYLTRANSFERASE 7","galacturonosyltransferase 7",8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0496200","LOC_Os08g38740.1",{"$nulls":6},"_","RAG2, RA14B, RA14, OsEnS-98","_","rice allergen 14B, endosperm-specific gene 98",7," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005615 - extracellular space, GO:0016068 - type I hypersensitivity, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0010431 - seed maturation, GO:0010951 - negative regulation of endopeptidase activity","TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000696 - starch content, TO:0000196 - amylose content, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000382 - 1000-seed weight, TO:0000598 - protein content, TO:0000602 - total fat content","PO:0007632 - seed maturation stage ","Os07g0214300","LOC_Os07g11380.1, LOC_Os07g11380.2",{"$nulls":6},"MAPKKK4","OsMAPKKK4","MAPK KINASE KINASE 4","MAPK kinase kinase 4",2," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0004672 - protein kinase activity, GO:0007165 - signal transduction","TO:0000276 - drought tolerance",null,"Os02g0220700","LOC_Os02g12810.4, LOC_Os02g12810.3, LOC_Os02g12810.2, LOC_Os02g12810.1",null,"Os08g0445700","Os10g0548200",1.4008532,0,null,"PYL/RCAR5","OsPYL/RCAR5, PYL5, OsPYL5, OsPYL11, PYL11","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 5","pyrabactin resistance-like 5, PYR1-like 11, pyrabactin resistance 1-like 11",5," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010427 - abscisic acid binding, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0009845 - seed germination, GO:0009738 - abscisic acid mediated signaling, GO:0009724 - detection of abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0009414 - response to water deprivation, GO:0004864 - phosphoprotein phosphatase inhibitor activity","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity","PO:0025034 - leaf ","Os05g0213500","LOC_Os05g12260.1"]
[{"$nulls":24},"Os04g0623800","Os08g0280100","Os08g0280100",3.153022,0,null,"Os01g0357200",3.4160388,"Os01g0708600",-1.1999387,{"$nulls":29},"D51","d51(d K8), dwf32, dK8, d51","DWARF KYUSHU 8","dwarf Kyushu8, dwarf Kyushu 8, dwarf Kyushu-8, dwarf-51",8," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000165 - panicle exsertion","PO:0006343 - axillary shoot system , PO:0009047 - stem , PO:0009049 - inflorescence ",{"$nulls":9},"_","OsSTA217","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0535700","LOC_Os08g42390.1",{"$nulls":6},"FKI","OsFKI, OsFK2, FK2","FRUCTOKINASE I","fructokinase I, Fructokinase 2",1," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0045471 - response to ethanol, GO:0005524 - ATP binding, GO:0006014 - D-ribose metabolic process, GO:0008865 - fructokinase activity, GO:0004747 - ribokinase activity, GO:0019252 - starch biosynthetic process","TO:0000015 - oxygen sensitivity",null,"Os01g0894300","LOC_Os01g66940.1",{"$nulls":6},"HAM3","OsHAM3, OsGRAS-21, OsGRAS21, GRAS-21, GRAS21, OsGRAS20, GRAS20","HAIRY MERISTEM 3","hairy meristem 3, GRAS protein 21",4," Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase","TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0006020 - shoot apical meristem development, TO:0006021 - vegetative to reproductive phase transition trait","PO:0020148 - shoot apical meristem ","Os04g0555000","LOC_Os04g46860.1",null,"Os03g0802500","Os02g0787500",1.3915907,0,null,"PYL/RCAR4","OsPYL/RCAR4, PYL4, OsPYL4, OsPYL6, PYL6","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 4","pyrabactin resistance-like 4, PYR1-like 6, pyrabactin resistance 1-like 6",3," Vegetative organ - Culm,  Vegetative organ - Root,  Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0010427 - abscisic acid binding, GO:0009414 - response to water deprivation, GO:0009845 - seed germination, GO:0009409 - response to cold, GO:0004864 - phosphoprotein phosphatase inhibitor activity, GO:0005737 - cytoplasm, GO:0009738 - abscisic acid mediated signaling, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:2000033 - regulation of seed dormancy, GO:0045926 - negative regulation of growth, GO:0009415 - response to water, GO:0030104 - water homeostasis, GO:0010118 - stomatal movement, GO:0006970 - response to osmotic stress","TO:0000180 - spikelet fertility, TO:0000227 - root length, TO:0000136 - relative water content, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000050 - inflorescence branching, TO:0000237 - water stress trait, TO:0000357 - growth and development trait, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000153 - relative yield, TO:0000143 - relative biomass, TO:0000253 - seed dormancy, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance","PO:0020103 - flag leaf , PO:0009006 - shoot system , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os03g0297600","LOC_Os03g18600.1"]
[{"$nulls":24},"Os11g0106700","Os02g0602000","Os02g0602000",3.15211,0,null,"Os01g0805600",3.4144638,"Os10g0500700",-1.1988082,{"$nulls":29},"D57","d57[d(x)], dwf38, d(x), d57","DWARF","dwarf, dwarf-57",9," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000391 - seed size, TO:0000432 - temperature response trait, TO:0000132 - basal internode diameter, TO:0000576 - stem length, TO:0000207 - plant height","PO:0000003 - whole plant , PO:0005005 - shoot internode , PO:0009010 - seed , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA218","_",null,8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0537001","LOC_Os08g42480.1",{"$nulls":6},"HAZ1","OsHAZ1, OsPHD28, PHD28","_","Plant homeo-domain finger protein 28, PHD finger protein 28",6," Seed - Morphological traits - Embryo,  Other","GO:0043565 - sequence-specific DNA binding, GO:0008270 - zinc ion binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus",null,null,"Os06g0229300 ","LOC_Os06g12400.1",{"$nulls":6},"GRAS20","OsGRAS-20, OsGRAS20, GRAS-20, OsGRAS19, GRAS19","GRAS PROTEIN 20","GRAS protein 20",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance",null,"Os04g0432100","LOC_Os04g35250.1",null,"Os02g0116600","Os01g0711400",1.3911031,0,null,"PYL/RCAR9","OsPYL/RCAR9, PYL9, OsPYL9, OsPYL2, PYL2","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 9","pyrabactin resistance-like 9, PYR1-like 2, pyrabactin resistance 1-like 2",6," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0004864 - phosphoprotein phosphatase inhibitor activity, GO:0042803 - protein homodimerization activity, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0010025 - wax biosynthetic process, GO:0010119 - regulation of stomatal movement, GO:0042752 - regulation of circadian rhythm, GO:0010427 - abscisic acid binding, GO:0005737 - cytoplasm","TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000303 - cold tolerance, TO:0000293 - chlorophyll-a content, TO:0002667 - abscisic acid content, TO:0000396 - grain yield, TO:0000709 - leaf gloss, TO:0000522 - stomatal conductance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000470 - vascular tissue related trait",null,"Os06g0562200","LOC_Os06g36670.1"]
[{"$nulls":24},"Os03g0684700","Os07g0561800","Os07g0561800",3.1362507,0,null,"Os01g0957200",3.4142792,"Os03g0262200",-1.1983789,{"$nulls":29},"SPK","Spk(t), Spk(t)*), Spk, OsTAC1, TAC1, qTAC9","SPREADING STUB","Spreading stub, Tiller angle control 1",9," Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0007275 - multicellular organismal development","TO:0000567 - tiller angle, TO:0000427 - culm angle, TO:0000447 - filled grain number, TO:0000346 - tiller number, TO:0000396 - grain yield","PO:0009047 - stem ","Os09g0529300 ","LOC_Os09g35980.1, LOC_Os09g35980.2",{"$nulls":7},"_","OsSTA219","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0129400","LOC_Os09g04300.1, LOC_Os09g04300.2, LOC_Os09g04300.3, LOC_Os09g04300.4",{"$nulls":6},"SPDS2","OsSPDS2, OsSPMS1, SPMS1","SPERMIDINE SYNTHASE 2","spermidine synthase 2, spermine synthase 1, spermidine/spermine synthase 1",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0016740 - transferase activity, GO:0048831 - regulation of shoot development, GO:0009692 - ethylene metabolic process, GO:0048364 - root development, GO:0006596 - polyamine biosynthetic process, GO:0004766 - spermidine synthase activity, GO:0010187 - negative regulation of seed germination, GO:0016049 - cell growth, GO:0009873 - ethylene mediated signaling pathway, GO:0008152 - metabolic process, GO:0009693 - ethylene biosynthetic process, GO:0009651 - response to salt stress","TO:0000449 - grain yield per plant, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000339 - stem thickness, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000430 - germination rate, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009047 - stem , PO:0020141 - stem node , PO:0000025 - root tip ","Os06g0528600","LOC_Os06g33710.1, LOC_Os06g33710.2, LOC_Os06g33710.3, LOC_Os06g33710.4",{"$nulls":6},"GRAS26","OsGRAS-26, OsGRAS26, GRAS-26, DLN137, OsDLN137, OsGRAS23, GRAS23","GRAS PROTEIN 26","GRAS protein 26, DLN repressor 137, DLN motif protein 137",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os05g0378200","LOC_Os05g31380.1",null,"Os03g0712700","Os01g0877500",1.3875775,0,null,"YGL10","CAO, CAO1, OsCAO1, Oslls1, Lls1, DVR, PGL","YELLOW-GREEN LEAF 10","chlorophyll a oxygenase, Chlorophyll a oxygenase 1, chlorophyllide a oxygenate 1, Lls1-homologue of maize, \\3, 8-divinyl chlorophyllide a 8-vinyl reductase\\\", pale green leaf, yellow green leaf 10\"",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005506 - iron ion binding, GO:0042542 - response to hydrogen peroxide, GO:0051607 - defense response to virus, GO:0009416 - response to light stimulus, GO:0048366 - leaf development, GO:0046686 - response to cadmium ion, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0031969 - chloroplast membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0060548 - negative regulation of cell death, GO:0009658 - chloroplast organization, GO:0006952 - defense response, GO:0009645 - response to low light intensity stimulus, GO:0010109 - regulation of photosynthesis, GO:0015996 - chlorophyll catabolic process, GO:0015995 - chlorophyll biosynthetic process, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0010027 - thylakoid membrane organization, GO:0009535 - chloroplast thylakoid membrane, GO:0050832 - defense response to fungus, GO:0009408 - response to heat","TO:0000326 - leaf color, TO:0000397 - grain size, TO:0000655 - leaf development trait, TO:0000162 - seed quality, TO:0000293 - chlorophyll-a content, TO:0000259 - heat tolerance, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000460 - light intensity sensitivity, TO:0000075 - light sensitivity, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000196 - amylose content, TO:0000455 - seed set percent, TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000063 - mimic response, TO:0002759 - grain number, TO:0000346 - tiller number, TO:0000249 - leaf senescence, TO:0002757 - flag leaf length, TO:0002758 - flag leaf lamina width, TO:0000295 - chlorophyll-b content, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000211 - gel consistency, TO:0000266 - chalky endosperm, TO:0000298 - chlorophyll ratio","PO:0001050 - leaf development stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os10g0567400","LOC_Os10g41780.4, LOC_Os10g41780.2, LOC_Os10g41780.3, LOC_Os10g41780.1"]
[{"$nulls":24},"Os01g0687800","Os01g0726400","Os01g0726400",3.0321162,0,null,"Os04g0188500",3.4129307,"Os03g0698400",-1.197115,{"$nulls":29},"XA4","Xa4, Xa4(Xa4a), Xa-4, Xa4-a, WAK, wak, xa4","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 4","Xanthomonas oryzae pv. oryzae resistance 4, Xanthomonas campestris pv. oryzae resistance-4, Xanthomonas oryzae pv. oryzae resistance-4",11," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009689 - induction of phytoalexin biosynthetic process, GO:0009828 - plant-type cell wall loosening, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0052324 - cell wall cellulose biosynthetic process","TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000207 - plant height, TO:0000051 - stem strength",{"$nulls":10},"_","OsSTA220","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os09g09630",{"$nulls":6},"SPDS1","OsSPDS1, OsSPDS, SPDS","SPERMIDINE SYNTHASE 1","spermidine synthase 1, Spermidine synthase",7," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0009266 - response to temperature stimulus, GO:0004766 - spermidine synthase activity, GO:0009651 - response to salt stress, GO:0008295 - spermidine biosynthetic process, GO:0006596 - polyamine biosynthetic process, GO:0009408 - response to heat","TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000432 - temperature response trait","PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os07g0408700","LOC_Os07g22600.1, LOC_Os07g22600.2",{"$nulls":6},"JMJ715","OsJMJ715","JUMONJI 715","Jumonji 715",3," Tolerance and resistance - Insect resistance","GO:0009738 - abscisic acid mediated signaling, GO:0052543 - callose deposition in cell wall, GO:0052542 - callose deposition during defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0002213 - defense response to insect, GO:0000785 - chromatin, GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0031490 - chromatin DNA binding, GO:0032454 - histone demethylase activity (H3-K9 specific), GO:0033169 - histone H3-K9 demethylation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os03g0430400","LOC_Os03g31594.2, LOC_Os03g31594.1",null,"Os02g0707900","Os05g0154600",1.3874264,0,null,"CYP51G3","OsCYP51G3","P-450 51G3","Cytochrome P450 51G3",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016132 - brassinosteroid biosynthetic process, GO:0020037 - heme binding, GO:0007623 - circadian rhythm, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000053 - pollen sterility, TO:0006031 - inflorescence size, TO:0000449 - grain yield per plant, TO:0000445 - seed number",null,"Os05g0211100","LOC_Os05g12040.1"]
[{"$nulls":24},"Os12g0533400","Os03g0305400","Os03g0305400",2.9881618,0,null,"Os01g0727100",3.4108188,"Os05g0150733",-1.1964893,{"$nulls":29},"D53","D53(D K3), DK3, Dwf34, SMXL6/7/8, OsD53","DWARF KYUSHU 3","Dwarf Kyushu3, Dwarf Kyushu 3, Dwarf Kyushu-3, dwarf-53, DWARF 53, DWARF53, SUPPRESSOR OF MAX2-LIKE6/7/8",11," Vegetative organ - Culm","GO:0009755 - hormone-mediated signaling, GO:0007275 - multicellular organismal development, GO:0009741 - response to brassinosteroid stimulus, GO:0005634 - nucleus, GO:0009742 - brassinosteroid mediated signaling","TO:0000576 - stem length, TO:0000077 - shoot anatomy and morphology trait, TO:0000346 - tiller number, TO:0000135 - leaf length, TO:0000326 - leaf color, TO:0000401 - plant growth hormone sensitivity, TO:0000544 - mesocotyl length, TO:0000207 - plant height, TO:0000089 - panicle type, TO:0000329 - tillering ability","PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0009025 - vascular leaf ","Os11g0104300","LOC_Os11g01330.1",{"$nulls":7},"_","OsSTA221","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os09g13440",{"$nulls":6},"FUCTA","OsFUT11, FUT11, FucTA, OsFucTA, OsFucT, FucT, \\alpha1, 3-FucT\\\"\"","CORE ALPHA-1,3-FUCOSYLTRANSFERASE","core alpha-1, 3-fucosyltransferase, alpha1, 3-Fucosyltransferase, Glycoprotein 3-alpha-L-fucosyltransferase A",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018392 - glycoprotein 3-alpha-L-fucosyltransferase activity, GO:0008417 - fucosyltransferase activity, GO:0006486 - protein amino acid glycosylation, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009908 - flower development, GO:0032580 - Golgi cisterna membrane, GO:0009555 - pollen development, GO:0048653 - anther development","TO:0000576 - stem length, TO:0000391 - seed size, TO:0000214 - anther shape, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000531 - anther length, TO:0000207 - plant height, TO:0002610 - pistil length, TO:0000145 - internode length, TO:0000622 - flower development trait, TO:0000429 - salt sensitivity, TO:0000448 - filled grain percentage","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0007615 - flower development stage ","Os08g0472600","LOC_Os08g36840.1",{"$nulls":6},"AMY2A","Amy2A*(RAmy2A), AMY1.5, AMYC2, RAmy2A, Amy4, Amy2A","ALPHA-AMYLASE 2A","Alpha-amylase2A, Alpha-amylase isozyme 2A, Alpha-amylase isozyme C2, Alpha-amylase-2A, Amylase-4",6," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length",null,"Os06g0713800","LOC_Os06g49970.2",null,"Os01g0958400","Os04g0507950",1.3705935,0,null,"LACS9","OsLACS1, LACS1, OsLACS9","LONG-CHAIN ACYL-COA SYNTHETASE 9","Long-chain acyl-CoA synthetase 1",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0005983 - starch catabolic process, GO:0009527 - plastid outer membrane, GO:0016020 - membrane, GO:0040007 - growth, GO:0003824 - catalytic activity, GO:0009941 - chloroplast envelope","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000145 - internode length",null,"Os12g0168700","LOC_Os12g07110.1, LOC_Os12g07110.2"]
[{"$nulls":24},"Os01g0130400","Os09g0535200","Os09g0535200",2.9101021,0,null,"Os09g0555100",3.4082623,"Os01g0962400",-1.1963295,{"$nulls":29},"D28","d28(d C), dwf24, dC, d28","DWARF CHOKEIDAIKOKU OR LONG STEMMED","chokeidaikoku or long stemmed dwarf, dwarf-28",11," Vegetative organ - Culm","GO:0015995 - chlorophyll biosynthetic process, GO:0007275 - multicellular organismal development","TO:0000145 - internode length, TO:0000089 - panicle type, TO:0000135 - leaf length, TO:0000576 - stem length, TO:0000299 - leaf lamina color, TO:0000391 - seed size, TO:0000370 - leaf width, TO:0000484 - seed shape, TO:0000492 - leaf shape","PO:0009010 - seed , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020142 - stem internode ",{"$nulls":9},"_","OsSTA222","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os09g16580",{"$nulls":6},"_","OsMIK, LPA","_","myo-inositol kinase, low phytic acid",3," Seed - Physiological traits - Storage substances","GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0006793 - phosphorus metabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0016301 - kinase activity","TO:0002666 - seed phosphorus content, TO:0000615 - abscisic acid sensitivity",null,"Os03g0737701","LOC_Os03g52760.1",{"$nulls":6},"KAO","OsKAO, kao, CYP88A5, OSKAO, Os KAO, RPE1","ENT-KAURENE OXIDASE","rice ent-kaurenoic acid oxidase, ent-kaurenoic acid oxidase, Putative cytochrome P450 DWARF3, reduced pollen elongation1",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0004497 - monooxygenase activity, GO:0022900 - electron transport chain, GO:0009566 - fertilization, GO:0009685 - gibberellin metabolic process, GO:0009860 - pollen tube growth, GO:0009686 - gibberellin biosynthetic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000599 - enzyme activity, TO:0000357 - growth and development trait, TO:0000420 - fertility related trait, TO:0000421 - pollen fertility, TO:0002675 - gibberellic acid content",null,"Os06g0110000","LOC_Os06g02019.1",null,"Os01g0881500","Os07g0185000",1.3703922,0,null,"RGG1","OsRGG1","RICE G PROTEIN GAMMA SUBUNIT 1","heterotrimeric G-protein gamma subunit 1, G protein gamma1 subunit, rice G protein gamma subunit 1, G protein gamma subunit 1",3," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009845 - seed germination, GO:0005834 - heterotrimeric G-protein complex, GO:0048527 - lateral root development, GO:0009817 - defense response to fungus, incompatible interaction, GO:0010541 - acropetal auxin transport, GO:0009414 - response to water deprivation, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005525 - GTP binding, GO:0018345 - protein palmitoylation, GO:0009736 - cytokinin mediated signaling, GO:0000139 - Golgi membrane, GO:0051302 - regulation of cell division, GO:0018342 - protein prenylation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0004871 - signal transducer activity, GO:0009691 - cytokinin biosynthetic process, GO:0033398 - zeatin biosynthetic process","TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0000152 - panicle number, TO:0000227 - root length, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000145 - internode length, TO:0002660 - cytokinin content, TO:0000734 - grain length, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000259 - heat tolerance, TO:0000397 - grain size, TO:0000167 - cytokinin sensitivity","PO:0009051 - spikelet , PO:0009049 - inflorescence ","Os03g0635100","LOC_Os03g43480.1"]
[{"$nulls":24},"Os06g0661800","Os11g0701100","Os11g0701100",2.8815715,0,null,"Os05g0563600",3.4067605,"Os12g0613500",-1.1963282,{"$nulls":29},"LA","la","LAZY GROWTH HABIT","lazy growth habit",11," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000427 - culm angle, TO:0000401 - plant growth hormone sensitivity","PO:0000003 - whole plant , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA223, STA223","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0359700","LOC_Os09g19550.1",{"$nulls":6},"PUP1","OsPUP1","PURINE PERMEASE 1","purine permease 1, PUP-type cytokinin transporter 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0016021 - integral to membrane, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0010229 - inflorescence development, GO:0010184 - cytokinin transport, GO:0015211 - purine nucleoside transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum","TO:0000040 - panicle length, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000346 - tiller number, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0002689 - leaf sheath length, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000621 - inflorescence development trait, TO:0002759 - grain number, TO:0000590 - grain weight","PO:0001083 - inflorescence development stage , PO:0005417 - phloem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0000034 - vascular system , PO:0009005 - root ","Os03g0187800","LOC_Os03g08880.1",{"$nulls":6},"AMY3E","Amy3D/E*(RAmy3D/E), alpha Amy8, alphaAmy8, AmyII-3, AMY1.4, Amy3E, Amy3D/E*, RAmy3D/E, Amy9, RAmy3E, alphaAmy8-C, AMY3E/AMY1.4, OsAmy3E","ALPHA-AMYLASE 3E","Alpha-amylase3E, Alpha-amylase isozyme 3E precursor, Alpha-amylase isozyme 3E, Alpha-amylase-3E, Amylase-9, Alpha-amylase-3D",8," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0080006 - internode patterning, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0001666 - response to hypoxia, GO:0009739 - response to gibberellin stimulus, GO:0051775 - response to redox state","TO:0000544 - mesocotyl length, TO:0000259 - heat tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000015 - oxygen sensitivity","PO:0007057 - 0 seed germination stage ","Os08g0473600","LOC_Os08g36900.1, LOC_Os08g36900.2",null,"Os01g0242600","Os03g0193000",1.3650099,0,null,"RGG2","OsRGG2","RICE G PROTEIN GAMMA SUBUNIT 2","heterotrimeric G-protein gamma subunit 2, G protein gamma2 subunit, rice G protein gamma subunit 2, G protein gamma subunit 2, type B heterotrimeric G protein c subunit",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0048573 - photoperiodism, flowering, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009740 - gibberellic acid mediated signaling, GO:0030308 - negative regulation of cell growth, GO:0007186 - G-protein coupled receptor protein signaling pathway","TO:0000342 - panicle axis angle, TO:0000145 - internode length, TO:0000371 - yield trait, TO:0002730 - grain shape, TO:0000137 - days to heading, TO:0000303 - cold tolerance, TO:0000040 - panicle length, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000449 - grain yield per plant, TO:0000457 - total biomass yield, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000207 - plant height",null,"Os02g0137800 ","LOC_Os02g04520.1, LOC_Os02g04520.2"]
[{"$nulls":24},"Os06g0149100","Os02g0511600","Os02g0511600",2.8020542,0,null,"Os05g0396700",3.404752,"Os03g0194900",-1.1955652,{"$nulls":29},"D27","d27(d t), dt, dwf23, d27, OsD27","DWARF BUNKETSUTO TILLERING","bunketsuto tillering dwarf, dwarf-27, DWARF27, DWARF 27, iron-binding protein D27, OsDWARF27",11," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010223 - secondary shoot formation, GO:0016859 - cis-trans isomerase activity, GO:0007275 - multicellular organismal development, GO:0042594 - response to starvation, GO:0009733 - response to auxin stimulus, GO:0009507 - chloroplast, GO:0005506 - iron ion binding, GO:0009735 - response to cytokinin stimulus","TO:0001013 - lateral root number, TO:0000163 - auxin sensitivity, TO:0002688 - leaf lamina joint bending, TO:0000346 - tiller number, TO:0000576 - stem length, TO:0000586 - seminal root length, TO:0000152 - panicle number, TO:0000011 - nitrogen sensitivity, TO:0000329 - tillering ability, TO:0000370 - leaf width, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity","PO:0009047 - stem , PO:0009025 - vascular leaf , PO:0006343 - axillary shoot system ","Os11g0587000",{"$nulls":8},"_","OsSTA224, STA224","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0364100","LOC_Os09g19550.1",{"$nulls":6},"PUP4","OsPUP4, BG3/OsPUP4, BG3, OsBG3","PURINE PERMEASE 4","purine permease 4, PUP-type cytokinin transporter 4, Big Grain3",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0009690 - cytokinin metabolic process, GO:0010184 - cytokinin transport, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0048366 - leaf development, GO:0009737 - response to abscisic acid stimulus","TO:0000567 - tiller angle, TO:0000137 - days to heading, TO:0002759 - grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000180 - spikelet fertility, TO:0000207 - plant height, TO:0000135 - leaf length, TO:0000655 - leaf development trait, TO:0000397 - grain size, TO:0000557 - secondary branch number, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0002689 - leaf sheath length, TO:0000734 - grain length, TO:0000399 - grain thickness, TO:0000615 - abscisic acid sensitivity","PO:0009015 - portion of vascular tissue ","Os01g0680200","LOC_Os01g48800.1",{"$nulls":6},"SLRL1","OsSLRL1, OsGAI, OsSLRL, OsGRAS-1, OsGRAS1, GAI, SLRL, GRAS-1, GRAS1","SLENDER RICE LIKE 1","SLR1-like1, GRAS protein 1",1," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0080006 - internode patterning, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0010468 - regulation of gene expression, GO:0045449 - regulation of transcription, GO:0009413 - response to flooding, GO:0009739 - response to gibberellin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000544 - mesocotyl length, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000286 - submergence sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0646300","LOC_Os01g45860.1",null,"Os01g0327400","Os07g0694000",1.359188,0,null,"_","SPED1, OsSPED1","_","SHORTENED PEDICELS AND/OR SECONDARY BRANCHES 1, shortened pedicels-D, shortened pedicels 1",6," Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009451 - RNA modification","TO:0000421 - pollen fertility, TO:0000050 - inflorescence branching, TO:0000089 - panicle type, TO:0000630 - pedicel length, TO:0000371 - yield trait, TO:0000142 - secondary branching of inflorescence",null,"Os06g0597500","LOC_Os06g39650.1"]
[{"$nulls":24},"Os05g0579500","Os02g0586900","Os02g0586900",2.7975466,0,null,"Os01g0761500",3.4033277,"Os03g0314700",-1.1953921,{"$nulls":29},"D33","d33(d B), dB, dwf29, d33","DWARF BONSAITO","bonsaito dwarf, dwarf-33",12," Vegetative organ - Culm","GO:0007275 - multicellular organismal development, GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000370 - leaf width, TO:0000085 - leaf rolling, TO:0000346 - tiller number","PO:0006343 - axillary shoot system , PO:0009025 - vascular leaf , PO:0009047 - stem ",{"$nulls":9},"_","OsSTA225","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0389000","LOC_Os09g22090.1",{"$nulls":6},"PUP7","OsPUP7","PURINE PERMEASE 7","purine permease 7, PUP-type cytokinin transporter 7",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0010184 - cytokinin transport, GO:0005783 - endoplasmic reticulum, GO:0051302 - regulation of cell division","TO:0006001 - salt tolerance, TO:0002759 - grain number, TO:0000135 - leaf length, TO:0000567 - tiller angle, TO:0000397 - grain size","PO:0009015 - portion of vascular tissue ","Os05g0556800","LOC_Os05g48300.1",{"$nulls":6},"GH3-2","OsGH3-2, OsGH3.2, GH3.2","GRETCHENHAGEN 3-2","OsGRETCHENHAGEN3-2, GRETCHENHAGEN3-2, GRETCHEN HAGEN3-2",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits,  Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009683 - indoleacetic acid metabolic process, GO:0010252 - auxin homeostasis, GO:0005737 - cytoplasm, GO:0016881 - acid-amino acid ligase activity, GO:0009416 - response to light stimulus, GO:0009733 - response to auxin stimulus, GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0051607 - defense response to virus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0002667 - abscisic acid content, TO:0000345 - seed viability, TO:0000435 - seed longevity, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000135 - leaf length, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root , PO:0009010 - seed , PO:0009066 - anther , PO:0009049 - inflorescence ","Os01g0764800","LOC_Os01g55940.1",null,"Os03g0109600","Os03g0713600",1.3589343,0,null,"_","GID1L2","_","GID1L2 family gene, gibberellin receptor GID1L2-like gene",6," Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010476 - gibberellin-mediated signaling, GO:0016787 - hydrolase activity","TO:0000371 - yield trait, TO:0000050 - inflorescence branching, TO:0000089 - panicle type, TO:0000630 - pedicel length, TO:0000142 - secondary branching of inflorescence, TO:0000166 - gibberellic acid sensitivity",null,"Os06g0214800","LOC_Os06g11130.1"]
[{"$nulls":24},"Os01g0750300","Os06g0231600","Os06g0231600",2.7285058,0,null,"Os11g0438500",3.4014308,"Os04g0385900",-1.1934456,{"$nulls":29},"SSV","Ssv*, Dwf44, Ssv","SHORT STATURE ONLY IN THE VEGETATIVE PHASE","short stature only in the vegetative phase, Short stature (vegetative type)",7," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA226","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0397200","LOC_Os09g23340.1",{"$nulls":6},"AN1","An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1","AWN1","Awn-1, basic helix-loop-helix protein 093, Regulatory of awn elongation 1, REGULATOR OF AWN ELONGATION 1, Regulator of Awn Elongation 1, Awn4-2",4," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other",null,"TO:0000072 - awn length, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0002734 - awn presence","PO:0025349 - awn ","Os04g0350700","LOC_Os04g28280.1",{"$nulls":6},"TCP5","OsTCP5","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 5","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 5, TEOSINTE BRANCHED1/CYCLOIDEA/PCFs 5, TEOSINTE BRANCHED1/ CYCLOIDEA/PCF transcription factor 5, TCP transcription factor 5",1," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009736 - cytokinin mediated signaling, GO:0009755 - hormone-mediated signaling, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0005739 - mitochondrion, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000401 - plant growth hormone sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os01g0763200","LOC_Os01g55750.1, LOC_Os01g55750.2, LOC_Os01g55750.3",null,"Os05g0275600","Os01g0172400",1.3577285,0,null,"_","OsFbox530, Fbox530, Os_F0198, OsFBX365, FBX365, PEG2","_","F-box protein 530, Paternally Expressed Gene 2",10," Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity",null,"TO:0000266 - chalky endosperm, TO:0000382 - 1000-seed weight, TO:0000104 - floury endosperm","PO:0009089 - endosperm ","Os10g0139300","LOC_Os10g04980.1"]
[{"$nulls":24},"Os02g0690000","Os12g0538700","Os12g0538700",2.7271411,0,null,"Os03g0216700",3.3980534,"Os02g0689200",-1.1932411,{"$nulls":29},"BUC","Buc*, Buc","BIG UPPERMOST CULM","Big uppermost culm",8," Vegetative organ - Culm","GO:0009825 - multidimensional cell growth","TO:0000339 - stem thickness, TO:0000132 - basal internode diameter","PO:0009047 - stem , PO:0020142 - stem internode ",{"$nulls":9},"_","OsSTA227","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0424701","LOC_Os09g25650.1",{"$nulls":6},"OXO1","OsOxO1, OsGLP3-3, GLP3-3","OXALATE OXIDASE 1","oxalate oxidase 1, german-like protein 3-3",3," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009856 - pollination, GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium","TO:0000439 - fungal disease resistance, TO:0000315 - bacterial disease resistance, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000653 - seed development trait","PO:0009049 - inflorescence , PO:0007016 - whole plant flowering stage , PO:0001170 - seed development stage ","Os03g0693700","LOC_Os03g48750.1",{"$nulls":6},"BHLH101","OsbHLH101, bHLH101, OsPIF1, PIF1","BASIC HELIX-LOOP-HELIX PROTEIN 101","basic helix-loop-helix protein 101, phytochrome-interacting factor 1",4," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length",null,"Os04g0618600","LOC_Os04g52770.1",null,"Os02g0768600","Os04g0578400",1.3572283,0,null,"RLCK267","OsRLCK267, OsRPK1, RPK1, OsMRLP15, MRLP15, OsCBM1, CBM1","RECEPTOR-LIKE CYTOPLASMIC KINASE 267","Receptor-like Cytoplasmic Kinase 267, receptor protein kinase 1, malectin/malectin-like receptor-like protein 15, Carbohydrate-Binding Malectin-Like Protein 1, Carbohydrate-binding malectin/malectin-like domain-containing protein 1",9," Vegetative organ - Culm,  Reproductive organ - Panicle, Mode of branching,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030104 - water homeostasis, GO:0010118 - stomatal movement, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation","TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000014 - panicle weight, TO:0000522 - stomatal conductance, TO:0000520 - stomatal closure rate, TO:0000547 - primary branch number, TO:0000566 - stomatal frequency","PO:0025034 - leaf ",null,"LOC_Os09g19380.1"]
[{"$nulls":24},"Os01g0100400","Os05g0402900","Os05g0402900",2.7227898,0,null,"Os12g0136600",3.3972874,"Os05g0549000",-1.192111,{"$nulls":29},"DH","D-h(t)*, Dwf43, D-h","DOMINANT DWARF","Dominant dwarf",1," Vegetative organ - Culm,  Seed - Morphological traits","GO:0007275 - multicellular organismal development, GO:0009740 - gibberellic acid mediated signaling","TO:0000207 - plant height, TO:0000576 - stem length, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000166 - gibberellic acid sensitivity, TO:0000287 - brown rice shape, TO:0000391 - seed size, TO:0000040 - panicle length, TO:0000145 - internode length","PO:0009047 - stem , PO:0009049 - inflorescence ","Os01g0201275 ","LOC_Os01g10460.1",{"$nulls":7},"_","OsSTA228","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os09g27710",{"$nulls":6},"OXO4","OsOxO4, OsGLP3-6, GLP3-6","OXALATE OXIDASE 4","oxalate oxidase 4, german-like protein 3-6",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0030912 - response to deep water, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009738 - abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000286 - submergence sensitivity, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000255 - sheath blight disease resistance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance, TO:0000477 - panicle blast disease resistance","PO:0005052 - plant callus , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0007073 - 2 formation of axillary shoot stage , PO:0007014 - booting stage , PO:0025034 - leaf , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009006 - shoot system ","Os03g0694000","LOC_Os03g48780.1",{"$nulls":6},"MYBAS1","OsMYBAS1","MYB ALTERNATIVE SPLICING 1","Transcription factor MYBAS1, MYB alternative splicing 1",11," Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0034059 - response to anoxia, GO:0009413 - response to flooding, GO:0009845 - seed germination, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000114 - flooding related trait","PO:0007057 - 0 seed germination stage ","Os11g0700500","LOC_Os11g47460.1, LOC_Os11g47460.4, LOC_Os11g47460.3, LOC_Os11g47460.2",null,"Os01g0503400","Os09g0565200",1.3572193,0]
[{"$nulls":24},"Os03g0124900","Os09g0540400","Os09g0540400",2.6796265,0,null,"Os10g0111700",3.3918743,"Os01g0710300",-1.1911913,{"$nulls":29},"HD5","Hd5(t)*, Hd5, qHD5, HAP3H, OsHAP3H, NF-YB, CBF-A, DTH8, qHD5(t)*, Ghd8, Ghd8/DTH8, Lhd1, NF-YB11, OsNF-YB11, NFYB11, LH8, DTH8/Ghd8, RH8, DTH8/Ghd8/LHD1, CAR8, DTH8/Ghd8/ OsHAP3H, EF8, OsEF8","Heading date (QTL)-5(t)","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0043565 - sequence-specific DNA binding, GO:0009648 - photoperiodism, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0010119 - regulation of stomatal movement","TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000050 - inflorescence branching, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0002616 - flowering time, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000439 - fungal disease resistance, TO:0000522 - stomatal conductance, TO:0000447 - filled grain number",null,"Os08g0174500","LOC_Os08g07740.1",{"$nulls":7},"_","OsSTA229","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os09g29990",{"$nulls":6},"_","Prol-02, pro10.3","_",null,3," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os03g0766350 ","LOC_Os03g55740.1",{"$nulls":6},"SLR1","slr1-1, slr1, slr, GAI, OsGAI, OsSLR1, Os SLR1, OsRGA1, OsGRAS-18, OsGRAS-18, GRAS-18, GRAS18, SLR-1","SLENDER RICE1","slender rice1-1, slender rice, Giberellin-insensitive gene homolog, DELLA protein SLR1, Protein SLENDER RICE1, Gibberellic acid-insensitive mutant protein, Slender Rice 1, SLENDER 1, SLENDER1, GRAS protein 18",3," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0042127 - regulation of cell proliferation, GO:0002213 - defense response to insect, GO:0009413 - response to flooding, GO:0040008 - regulation of growth, GO:0048364 - root development, GO:0009416 - response to light stimulus, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009651 - response to salt stress, GO:0009740 - gibberellic acid mediated signaling, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0010468 - regulation of gene expression, GO:0045449 - regulation of transcription, GO:0045926 - negative regulation of growth, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009409 - response to cold","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0006036 - stem elongation, TO:0000205 - white-backed planthopper resistance, TO:0000075 - light sensitivity, TO:0006001 - salt tolerance, TO:0000576 - stem length, TO:0000401 - plant growth hormone sensitivity, TO:0000227 - root length, TO:0000145 - internode length, TO:0000492 - leaf shape, TO:0000207 - plant height, TO:0000084 - root number, TO:0000112 - disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000017 - anatomy and morphology related trait, TO:0000286 - submergence sensitivity, TO:0000303 - cold tolerance","PO:0007089 - stem elongation stage , PO:0000003 - whole plant , PO:0009005 - root , PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0020142 - stem internode ","Os03g0707600","LOC_Os03g49990.1",null,"Os04g0479100","Os01g0757200",1.3517102,0]
[{"$nulls":24},"Os01g0113200","Os01g0281200","Os01g0281200",2.6292598,0,null,"Os12g0144700",3.3849678,"Os02g0193000",-1.1901093,{"$nulls":29},"DIM*","OsDIM*, OsDIM, DIM, dim, OSDIM","RICE DIM PROTEIN","Rice DIM protein, rice diminuto",10," Vegetative organ - Culm","GO:0004499 - flavin-containing monooxygenase activity",{"$nulls":11},"_","OsSTA230","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0482620","LOC_Os09g30446.1",{"$nulls":6},"_","Prol-03, pro13b.5","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0328333 ","LOC_Os05g26240.1",{"$nulls":6},"NSP2","Os NSP2, OsNSP2, OsGRAS-13, OsGRAS13, GRAS-13, GRAS13, OsGRAS12, GRAS12","NODULATION SIGNALING PATHWAY 2","Nodulation Signalling Pathway2, Symbiotic GRAS-Type Transcription Factor NSP2, GRAS protein 13",3," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000476 - growth hormone content, TO:0000329 - tillering ability",null,"Os03g0263300","LOC_Os03g15680.1",null,"Os05g0445100","Os05g0176700",1.3460423,0]
[{"$nulls":24},"Os08g0435900","Os10g0571200","Os10g0571200",2.6083639,0,null,"Os01g0170300",3.3831484,"Os12g0109900",-1.1898848,{"$nulls":29},"CPS1","OsCPS1, OsCPS1ent, OsCPS, Os CPS1, OsTPS4","ENT-COPALYL DIPHOSPHATE SYNTHASE 1","rice ent-copalyl diphosphate (CDP) synthase1, ent-copalyl diphosphate synthase 1, \\Ent-copalyl diphosphate synthase 1, chloroplastic\\\", Ent-CDP synthase 1, terpene synthase 4\"",2," Biochemical character,  Vegetative organ - Culm","GO:0000287 - magnesium ion binding, GO:0009686 - gibberellin biosynthetic process, GO:0009905 - ent-copalyl diphosphate synthase activity, GO:0051504 - diterpene phytoalexin precursor biosynthetic process pathway, GO:0009685 - gibberellin metabolic process, GO:0009536 - plastid, GO:0016829 - lyase activity, GO:0009507 - chloroplast, GO:0008152 - metabolic process","TO:0000599 - enzyme activity, TO:0000207 - plant height, TO:0000357 - growth and development trait",null,"Os02g0278700","LOC_Os02g17780.1",{"$nulls":7},"_","OsSTA231","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0512800","LOC_Os09g33790.1",{"$nulls":6},"_","Prol-04, pro13b.8, PROLM4","_","Prolamin 4",5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0328800 ","LOC_Os05g26350.1",{"$nulls":6},"SHR2","OsSHR2, OsGRAS-15, OsGRAS15, GRAS-15, GRAS15","SHORT ROOT GENE 2","rice SHORT  ROOT gene2, SHORT-ROOT 2, SHORTROOT2, SHORT-ROOT protein 2, GRAS protein 15",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0048364 - root development, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0051302 - regulation of cell division, GO:0010374 - stomatal complex development","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000656 - root development trait, TO:0000227 - root length, TO:0000043 - root anatomy and morphology trait, TO:0000306 - root thickness, TO:0000735 - plastochron, TO:0000566 - stomatal frequency","PO:0000258 - root cortex , PO:0007520 - root development stage , PO:0020138 - leaf lamina vein ","Os03g0433200","LOC_Os03g31880.1",null,"Os01g0234900","Os06g0190500",1.3412071,0]
[{"$nulls":24},"Os02g0781000","Os11g0135000","Os11g0135000",2.602723,0,null,"Os01g0758000",3.381117,"Os05g0115100",-1.1885333,{"$nulls":29},"CPS4","OsCPS4, CYC1, OsCYC1, OsCyc1, cpsl3, OsCPSL3, OsCPSsyn, OsCyc1/OsCPS4, OsTPS15, Os-CPS4","ENT-COPALYL DIPHOSPHATE SYNTHASE 4","rice ent-copalyl diphosphate (CDP) synthase4, ent-copalyl diphosphate synthase 4, ent-copalyl diphosphate synthase like 3, syn-copalyl diphosphate synthase, syn-copalyl diphosphate synthase, cyclase1, cyclase 1, syn-CDP synthase, terpene synthase 15",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0009685 - gibberellin metabolic process, GO:0010039 - response to iron ion, GO:0042742 - defense response to bacterium, GO:0051504 - diterpene phytoalexin precursor biosynthetic process pathway, GO:0006952 - defense response, GO:0051498 - syn-copalyl diphosphate synthase activity, GO:0016829 - lyase activity, GO:0009411 - response to UV, GO:0009609 - response to symbiotic bacterium, GO:0000287 - magnesium ion binding, GO:0008152 - metabolic process, GO:0009975 - cyclase activity, GO:0050832 - defense response to fungus","TO:0000624 - allelopathic effect, TO:0000224 - iron sensitivity, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0002670 - momilactone A content, TO:0002671 - momilactone B content, TO:0000439 - fungal disease resistance, TO:0000599 - enzyme activity, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002675 - gibberellic acid content","PO:0009005 - root ","Os04g0178300","LOC_Os04g09900.3, LOC_Os04g09900.2, LOC_Os04g09900.1",{"$nulls":7},"_","OsSTA232","_",null,9," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os09g0533800","LOC_Os09g36340.1",{"$nulls":6},"_","Prol-05, pro13b.9","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0328901 ","LOC_Os05g26368.1",{"$nulls":6},"GRAS23","OsGRAS23, OsGRAS-23, GRAS-23, OsGRAS22, GRAS22","GRAS PROTEIN 23","GRAS transcription factor 23, GRAS protein 23",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0006979 - response to oxidative stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity",null,"Os04g0590400 ","LOC_Os04g50060.2, LOC_Os04g50060.1",null,"Os01g0182700","Os03g0743900",1.3375363,0]
[{"$nulls":24},"Os02g0747400","Os03g0780800","Os03g0780800",2.5441794,0,null,"Os04g0677700",3.379863,"Os10g0518300",-1.1875715,{"$nulls":29},"KS1","OsKS1, KS1, KS1A, KSL1, OsKSL1, OsKS1A, OsKS1B, OsKS1C, Ks1, Os KS1, OsTPS26","ENT-KAURENE SYNTHASE 1","rice ent-kaurene synthase1, Ent-kaurene synthase 1, \\Ent-kaur-16-ene synthase, chloroplastic\\\", Kaurene synthase 1, Ent-kaurene synthase B, ent-kaurene synthase I, terpene synthase 26\"",4," Biochemical character,  Vegetative organ - Culm","GO:0008152 - metabolic process, GO:0009686 - gibberellin biosynthetic process, GO:0009685 - gibberellin metabolic process, GO:0009899 - ent-kaurene synthase activity, GO:0000287 - magnesium ion binding, GO:0005739 - mitochondrion, GO:0009507 - chloroplast, GO:0009536 - plastid","TO:0000357 - growth and development trait, TO:0000599 - enzyme activity, TO:0002675 - gibberellic acid content",null,"Os04g0611800","LOC_Os04g52230.1",{"$nulls":7},"CHX3","OsSTA234, STA234, OsCHX03, CHX03, OsCHX3","CATION/H+ EXCHANGER  3","cation/H+ exchanger  3",9," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0006885 - regulation of pH, GO:0012505 - endomembrane system, GO:0015299 - solute:hydrogen antiporter activity, GO:0015672 - monovalent inorganic cation transport",null,"PO:0009066 - anther , PO:0009046 - flower ","Os09g0545000","LOC_Os09g37300.1",{"$nulls":6},"_","Prol-09, Prol-27","_",null,5," Seed - Physiological traits - Storage substances",{"$nulls":3},"Os05g0329400","LOC_Os05g26440.1",{"$nulls":6},"RAM1","OsRAM1, OsGRAS43, GRAS43","_","GRAS protein 43",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0009610 - response to symbiotic fungus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance",null,"Os11g0507300","LOC_Os11g31100.1",null,"Os05g0333500","Os09g0267800",1.3354944,0]
[{"$nulls":24},"Os07g0556200","Os01g0915000","Os01g0915000",2.5204828,0,null,"Os04g0340300",3.3795261,"Os10g0510500",-1.1871086,{"$nulls":29},"KS2","OsKS2, KS2, KSL2, OsKSL2, OsTPS27","ENT-KAURENE SYNTHASE 2","rice ent-kaurene synthase2, Ent-kaurene synthase 2, Ent-kaurene synthase like-2, Ent-kaurene synthase-like 2, terpene synthase 27",4," Biochemical character,  Vegetative organ - Culm","GO:0009899 - ent-kaurene synthase activity, GO:0006952 - defense response, GO:0009685 - gibberellin metabolic process, GO:0000287 - magnesium ion binding, GO:0016829 - lyase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0008152 - metabolic process, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000172 - jasmonic acid sensitivity, TO:0000599 - enzyme activity, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0002675 - gibberellic acid content","PO:0009005 - root ","Os04g0612000","LOC_Os04g52240.1",{"$nulls":7},"PT20","OsSTA235, OsPT20","PHOSPHATE TRANSPORTER 20","phosphate transporter 20",9," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005777 - peroxisome, GO:0016036 - cellular response to phosphate starvation, GO:0016021 - integral to membrane, GO:0006810 - transport","TO:0000102 - phosphorus sensitivity","PO:0009066 - anther , PO:0009029 - stamen ","Os09g0554000","LOC_Os09g38100.1",{"$nulls":6},"_","Prol-10, pro13b.16, PROLM12","_","Prolamin 12",5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0329200 ","LOC_Os05g26480.1",{"$nulls":6},"GRAS7","OsGRAS-7, OsGRAS7, GRAS-7","GRAS PROTEIN 7","GRAS protein 7",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010014 - meristem initiation, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os02g0197300","LOC_Os02g10360.1",null,"Os03g0132800","Os11g0148500",1.3287393,0]
[{"$nulls":24},"Os05g0349700","Os08g0531300","Os08g0531300",2.5178645,0,null,"Os06g0272800",3.3790753,"Os06g0698600",-1.1868092,{"$nulls":29},"KS7","OsKS7, KS7, KSL7, OsKSL7, DTC1, OsDTC1, OsKS3, OsDTC1/OsKS7, OsTPS6, TPS6","ENT-KAURENE SYNTHASE 7","rice ent-kaurene synthase7, Ent-kaurene synthase 7, Ent-kaurene synthase-like 7, Ent-cassa-12, 15-diene synthase, ent-Cassadiene synthase, Diterpene cyclase 1, Oryza sativa diterpene cyclase 1, terpene synthase 6",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0009899 - ent-kaurene synthase activity, GO:0016829 - lyase activity, GO:0008152 - metabolic process, GO:0051501 - diterpene phytoalexin metabolic process, GO:0052315 - phytoalexin biosynthetic process, GO:0005739 - mitochondrion, GO:0006952 - defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0034277 - ent-cassa-12,15-diene synthase activity, GO:0050832 - defense response to fungus, GO:0000287 - magnesium ion binding, GO:0009536 - plastid","TO:0002675 - gibberellic acid content, TO:0000172 - jasmonic acid sensitivity, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000599 - enzyme activity, TO:0000357 - growth and development trait",null,"Os02g0570400","LOC_Os02g36140.2, LOC_Os02g36140.5, LOC_Os02g36140.4, LOC_Os02g36140.3",{"$nulls":7},"_","OsSTA236","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0168100","LOC_Os10g08640.1",{"$nulls":6},"_","Prol-11, pro13b.17, PROLM13","_","Prolamin 13",5," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os05g0330150 ","LOC_Os05g26490.1",{"$nulls":6},"GRAS10","OsGRAS-10, OsGRAS10, GRAS-10","GRAS PROTEIN 10","GRAS protein 10",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os02g0681900","LOC_Os02g45760.1",null,"Os07g0204900","Os06g0163000",1.324289,0]
[{"$nulls":24},"Os02g0110200","Os01g0348900","Os01g0348900",2.48484,0,null,"Os01g0915400",3.3731406,"Os03g0296800",-1.1860336,{"$nulls":29},"MOC1","moc1, OsMOC1, OsGRAS-33, OsGRAS33, GRAS-33, GRAS33","MONOCULM 1","monoculm1, Monoculm 1, Protein MONOCULM 1, GRAS protein 33",6," Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009739 - response to gibberellin stimulus, GO:0045449 - regulation of transcription, GO:0010075 - regulation of meristem growth, GO:0009737 - response to abscisic acid stimulus, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0030528 - transcription regulator activity, GO:0010229 - inflorescence development, GO:0010014 - meristem initiation, GO:0006350 - transcription, GO:0048364 - root development","TO:0000166 - gibberellic acid sensitivity, TO:0000547 - primary branch number, TO:0000456 - spikelet number, TO:0000152 - panicle number, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000656 - root development trait, TO:0000501 - spikelet weight, TO:0000207 - plant height","PO:0008039 - stem base , PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0000232 - axillary bud meristem , PO:0004709 - axillary bud , PO:0005001 - basal axillary shoot system , PO:0006343 - axillary shoot system ","Os06g0610300","LOC_Os06g40780.1",{"$nulls":7},"_","OsSTA238","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0188250","LOC_Os10g11022.1",{"$nulls":6},"_","Prol-12, pro13b.18","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0330600  ","LOC_Os05g26620.1",{"$nulls":6},"GRAS12","OsGRAS-12, OsGRAS12, GRAS-12, OsGRAS11, GRAS11","GRAS PROTEIN 12","GRAS protein 12",3," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0193000","LOC_Os03g09280.3, LOC_Os03g09280.2, LOC_Os03g09280.1",null,"Os01g0916600","Os04g0442000",1.3238521,0]
[{"$nulls":24},"Os06g0351500","Os11g0116400","Os11g0116400",2.4312913,0,null,"Os06g0232300",3.368972,"Os04g0612600",-1.1847388,{"$nulls":29},"KO4","OsKO4, OsKOL4, KOS1, CYP701A8, OsCYP701A8, OsKO2, CYP701A8/OsKOL4","ENT-KAURENE OXIDASE 4","rice ent-kaurene oxidase4, cytochrome P450 701A8",6," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0010336 - gibberellic acid homeostasis, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0009739 - response to gibberellin stimulus, GO:0010241 - ent-kaurene oxidase activity, GO:0080006 - internode patterning, GO:0050832 - defense response to fungus, GO:0009055 - electron carrier activity, GO:0009686 - gibberellin biosynthetic process, GO:0020037 - heme binding, GO:0004497 - monooxygenase activity","TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0002675 - gibberellic acid content, TO:0000145 - internode length",null,"Os06g0569500","LOC_Os06g37300.1, LOC_Os06g37300.2",{"$nulls":7},"_","OsSTA239","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0193500","LOC_Os10g11750.1",{"$nulls":6},"_","Prol-13","_",null,5," Seed - Physiological traits - Storage substances",{"$nulls":3},"Os05g0331550",{"$nulls":7},"GRAS27","OsGRAS-27, OsGRAS27, GRAS-27, OsGRAS24, GRAS24","GRAS PROTEIN 27","GRAS protein 27",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0050832 - defense response to fungus, GO:0003712 - transcription cofactor activity, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance",null,"Os05g0378500","LOC_Os05g31420.1",null,"Os12g0612400","Os01g0624700",1.3198913,0]
[{"$nulls":24},"Os01g0658700","Os07g0526400","Os07g0526400",2.4174047,0,null,"Os07g0605600",3.3678246,"Os06g0652200",-1.1840578,{"$nulls":29},"KO5","OsKO5, OSKOL5, KOS2, OsKOS2, CYP701A9, OsCYP701A9, OsKO1, KO1","ENT-KAURENE OXIDASE 5","rice ent-kaurene oxidase5, cytochrome P450 701A9",6," Biochemical character,  Vegetative organ - Culm","GO:0080006 - internode patterning, GO:0010336 - gibberellic acid homeostasis, GO:0009055 - electron carrier activity, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0010241 - ent-kaurene oxidase activity","TO:0000145 - internode length",null,"Os06g0568600","LOC_Os06g37224.1",{"$nulls":7},"_","OsSTA241","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0365300","LOC_Os10g22080.1",{"$nulls":6},"_","Prol-14, pro13b.21, PROLM17","_",null,5," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os05g0331800 ","LOC_Os05g26750.1",{"$nulls":6},"GRAS29","OsGRAS-29, OsGRAS29, GRAS-29, OsGRAS26, GRAS26","GRAS PROTEIN 29","GRAS protein 29",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os05g0500600","LOC_Os05g42130.1",null,"Os01g0771200","Os01g0134700",1.3192941,0]
[{"$nulls":24},"Os02g0532900","Os03g0826800","Os03g0826800",2.4005404,0,null,"Os01g0881800",3.3678246,"Os07g0620500",-1.1836748,{"$nulls":29},"GA2OX1","OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1","GIBBERELLIN 2-OXIDASE 1 ","rice GA 2-oxidase1, GA 2-oxidase 1, Gibberellin 2-oxidase 1",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016216 - isopenicillin-N synthase activity, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0017000 - antibiotic biosynthetic process, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process","TO:0000303 - cold tolerance, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height",null,"Os05g0158600","LOC_Os05g06670.1",{"$nulls":7},"IQM6","OsSTA242, OsIQM6","IQ MOTIF CONTAINING PROTEIN 6","IQ motif containing protein 6",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0005829 - cytosol, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity","PO:0009066 - anther ","Os10g0411500","LOC_Os10g27170.1",{"$nulls":6},"_","Prol-15, pro13b.22","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0332000 ","LOC_Os05g26770.1",{"$nulls":6},"GRAS43","OsGRAS-43, OsGRAS43, GRAS-43, OsGRAS39, GRAS39","GRAS PROTEIN 43","GRAS protein 43",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009005 - root ","Os11g0141550","LOC_Os11g04570.1",null,"Os08g0559200","Os03g0308800",1.3063307,0]
[{"$nulls":24},"Os10g0150600","Os04g0613000","Os04g0613000",2.2946336,0,null,"Os03g0666800",3.364772,"Os09g0539200",-1.1824306,{"$nulls":29},"GA2OX2","OsGA2ox2, ga2ox 2, OsGA2ox-2","GIBBERELLIN 2-OXIDASE 2","rice GA 2-oxidase2, GA 2-oxidase 2, Gibberellin 2-oxidase 2",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009725 - response to hormone stimulus, GO:0009685 - gibberellin metabolic process, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0002675 - gibberellic acid content, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height",null,"Os01g0332200","LOC_Os01g22910.1, LOC_Os01g22920.1",{"$nulls":7},"_","OsSTA243","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os10g27370",{"$nulls":6},"_","Prol-16, OsEnS-87, EnS-87, pro16.1","_","endosperm-specific gene 87",6," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0045735 - nutrient reservoir activity, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os06g0507100","LOC_Os06g31060.1, LOC_Os06g31060.2",{"$nulls":6},"GRAS56","OsGRAS-56, OsGRAS56, GRAS-56, DLN259, OsDLN259, OsGRAS53, GRAS53","GRAS PROTEIN 56","GRAS protein 56, DLN repressor 259, DLN motif protein 259",12," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os12g0573200","LOC_Os12g38490.1",null,"Os07g0523300","Os03g0263400",1.2958307,0]
[{"$nulls":24},"Os02g0236800","Os04g0518600","Os04g0518600",2.2929747,0,null,"Os04g0572200",3.3637822,"Os09g0455500",-1.1798892,{"$nulls":29},"GA2OX3","OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3, GA2ox4","GIBBERELLIN 2-OXIDASE 3","rice GA 2-oxidase3, GA 2-oxidase 3, Gibberellin 2-oxidase 3",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0009725 - response to hormone stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009685 - gibberellin metabolic process","TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000207 - plant height",null,"Os01g0757200","LOC_Os01g55240.1",{"$nulls":7},"_","OsSTA244","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0425400","LOC_Os10g28970.2",{"$nulls":6},"_","Prol-17, OsEnS-88, pro16.2, PROLM24","_","16 kDa prolamin, cystein-rich 16.6-kDa prolamin, endosperm-specific gene 88",6," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum","TO:0002661 - seed maturation","PO:0009089 - endosperm ","Os06g0507200 ","LOC_Os06g31070.1",{"$nulls":6},"PSIGRAS3","PsiOsGRAS3, PsiGRAS3","PSI GRAS PROTEIN 3",null,3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance",null,"Os03g0575900","LOC_Os03g37900.1",null,"Os03g0757500","Os10g0524400",1.2885752,0]
[{"$nulls":24},"Os03g0243700","Os01g0357100","Os01g0357100",2.2584693,0,null,"Os07g0545100",3.362395,"Os03g0836000",-1.1792774,{"$nulls":29},"SBI","GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4","SHORTENED BASAL INTERNODES","rice GA 2-oxidase4, GA 2-oxidase 4, Gibberellin 2-oxidase 4",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell, GO:0009685 - gibberellin metabolic process, GO:0080006 - internode patterning, GO:0009725 - response to hormone stimulus, GO:0009409 - response to cold","TO:0000401 - plant growth hormone sensitivity, TO:0000068 - lodging incidence, TO:0000303 - cold tolerance, TO:0000145 - internode length, TO:0000207 - plant height","PO:0005005 - shoot internode , PO:0009047 - stem ","Os05g0514600","LOC_Os05g43880.1",{"$nulls":7},"BAMY1","OsSTA246, STA246, OsBamy1, Bamy1, BAM2, OsBAM2, OsBmy9, Bmy9","BETA-AMYLASE 1","beta-amylase 1, Beta-amylase 2",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0000272 - polysaccharide catabolic process, GO:0016161 - beta-amylase activity",null,"PO:0009066 - anther ","Os10g0465700","LOC_Os10g32810.1",{"$nulls":6},"_","Prol-20, pro13b.1, PROLM19","_","Prolamin 19",7," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os07g0219250 ","LOC_Os07g11900.1",{"$nulls":6},"PSIGRAS5","PsiOsGRAS5, PsiGRAS5","PSI GRAS PROTEIN 5",null,4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os04g0447232","LOC_Os04g37440.1",null,"Os04g0663300","Os01g0672400",1.2881516,0]
[{"$nulls":24},"Os06g0483200","Os03g0122300","Os03g0122300",2.235305,0,null,"Os10g0456800",3.3594925,"Os01g0955100",-1.1783794,{"$nulls":29},"DGL1","dgl1, dgl1-1, dgl1-2, dgl1-3","DWARF AND GLADIUS LEAF 1","dwarf and gladius leaf-1",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA247","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0516600","LOC_Os10g37260.1",{"$nulls":6},"_","Prol-23, pro10.4, SSA5","_","2S albumin seed storage family protein",11," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os11g0535525 ","LOC_Os11g33000.1",{"$nulls":6},"WX1","wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI, GSS, OsWx","GLUTINOUS ENDOSPERM","glutinous endosperm, waxy, Waxy, WAXY, \\Granule-bound starch synthase 1, chloroplastic/amyloplastic\\\", Granule-bound starch synthase I, UDP-glycogen synthase, \\\"Granule-bound starch synthase, chloroplast precursor\\\", glycogen [starch] synthase, Granule-bound glycogen synthase, UDPG-glycogen transglucosylase, uridine diphosphoglucose-glycogen glucosyltransferase, glycogen [starch] synthetase, Granule-bound glycogen [starch] synthase, UDPG-glycogen synthetase, granule bound starch synthase I, granule-bound starch synthase 1, granule-bound starch synthase I\"",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0010229 - inflorescence development, GO:0009507 - chloroplast, GO:0005982 - starch metabolic process, GO:0009011 - starch synthase activity, GO:0009501 - amyloplast, GO:0004373 - glycogen (starch) synthase activity, GO:0009568 - amyloplast starch grain, GO:0019252 - starch biosynthetic process, GO:0033840 - NDP-glucose-starch glucosyltransferase activity, GO:0009845 - seed germination, GO:0009536 - plastid, GO:0009415 - response to water, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009413 - response to flooding","TO:0000098 - glutinous endosperm, TO:0000196 - amylose content, TO:0000162 - seed quality, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000286 - submergence sensitivity, TO:0000621 - inflorescence development trait, TO:0000259 - heat tolerance, TO:0000011 - nitrogen sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage , PO:0009089 - endosperm , PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage , PO:0001083 - inflorescence development stage , PO:0007632 - seed maturation stage ","Os06g0133000","LOC_Os06g04200.4, LOC_Os06g04200.3, LOC_Os06g04200.2, LOC_Os06g04200.1",null,"Os04g0650000","Os02g0749700",1.2864028,0]
[{"$nulls":24},"Os02g0158800","Os04g0437000","Os04g0437000",2.2227905,0,null,"Os06g0336200",3.3541298,"Os02g0552000",-1.1779848,{"$nulls":29},"AGAP","OsAGAP","ARF-GTPASE-ACTIVATING PROTEIN","ARF-GTPase-activating protein, adenosine diphosphate ribosylation factor-GTPase-activating protein",2," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005543 - phospholipid binding, GO:0005096 - GTPase activator activity, GO:0008060 - ARF GTPase activator activity, GO:0005634 - nucleus, GO:0005737 - cytoplasm","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000396 - grain yield","PO:0009066 - anther , PO:0009039 - glume , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0009047 - stem , PO:0009005 - root ","Os02g0198300","LOC_Os02g10480.6, LOC_Os02g10480.5, LOC_Os02g10480.4, LOC_Os02g10480.3, LOC_Os02g10480.2, LOC_Os02g10480.1",{"$nulls":7},"_","OsSTA248","_",null,10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0568100","LOC_Os10g41860.1",{"$nulls":6},"_","Prol-24, pro13a.3","_",null,12," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0008233 - peptidase activity, GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum, GO:0006508 - proteolysis, GO:0045735 - nutrient reservoir activity",null,"PO:0009089 - endosperm ","Os12g0269100 ","LOC_Os12g16880.1",{"$nulls":6},"NH2","OsNH2, OsNPR2, NPR2, OsNPR2/NH2, DLN21, OsDLN21, PR2, OsNPR1, NPR1","NPR1 HOMOLOG 2","NPR1-like 2, NPR1 homologue 2, nonexpresser of PR genes 2, Arabidopsis NPR1 homolog 2, non-expressor of pathogenesis-related gene2, DLN repressor 21, DLN motif protein 21",1," Tolerance and resistance - Disease resistance","GO:0009617 - response to bacterium, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0009817 - defense response to fungus, incompatible interaction","TO:0000175 - bacterial blight disease resistance",null,"Os01g0767900","LOC_Os01g56200.2, LOC_Os01g56200.1",null,"Os03g0833200","Os06g0152200",1.2810127,0]
[{"$nulls":24},"Os06g0704700","Os06g0531600","Os06g0531600",2.1774642,0,null,"Os01g0924966",3.3535302,"Os03g0266200",-1.1778779,{"$nulls":29},"CBL1","OsCBL1, Os-CBL1","CALCINEURIN B-LIKE PROTEIN 1","Calcineurin B-like protein 1, Calcineurin B-Like protein1",10," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048527 - lateral root development, GO:0005509 - calcium ion binding, GO:0031225 - anchored to membrane, GO:0009684 - indoleacetic acid biosynthetic process, GO:0010600 - regulation of auxin biosynthetic process, GO:0005773 - vacuole","TO:0001012 - lateral root length, TO:0000514 - potassium uptake, TO:0000227 - root length, TO:0000571 - shoot fresh weight, TO:0000578 - root fresh weight",null,"Os10g0564800","LOC_Os10g41510.1",{"$nulls":7},"_","OsSTA249","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0158200","LOC_Os11g05970.1",{"$nulls":6},"_","Prol-25, Prol-28, Prol-29, Prol-30, pro13a.4, PROLM28","_","Prolamin 28",12," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity",null,"PO:0009089 - endosperm ","Os12g0269200 ","LOC_Os12g16890.1",{"$nulls":6},"EDS1","OsEDS1","ENHANCED DISEASE SUSCEPTIBILITY 1","enhanced disease susceptibility 1, ENHANCED DISEASE SUSCEPTIBILITY1, Arabidopsis EDS1 homolog",9," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0009617 - response to bacterium, GO:0004806 - triacylglycerol lipase activity, GO:0006629 - lipid metabolic process, GO:0002237 - response to molecule of bacterial origin, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0042742 - defense response to bacterium","TO:0000315 - bacterial disease resistance, TO:0000424 - brown planthopper resistance, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os09g0392100","LOC_Os09g22450.1",null,"Os03g0701700","Os01g0783800",1.2757636,0]
[{"$nulls":24},"Os06g0571800","Os04g0366000","Os04g0366000",2.105174,0,null,"Os07g0293000",3.3521283,"Os06g0551400",-1.1777105,{"$nulls":29},"CESA7","OsCesA7, OsCESA7, OS_CESA07, OsCesA 7, CesA7","CELLULOSE SYNTHASE A7","Cellulose synthase A catalytic subunit 7 [UDP-forming], Cellulose synthase A catalytic subunit 7",10," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009834 - secondary cell wall biogenesis, GO:0005515 - protein binding, GO:0009642 - response to light intensity, GO:0016760 - cellulose synthase (UDP-forming) activity, GO:0007047 - cell wall organization, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0030244 - cellulose biosynthetic process, GO:0009651 - response to salt stress","TO:0000051 - stem strength, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000640 - total root number, TO:0000011 - nitrogen sensitivity",null,"Os10g0467800","LOC_Os10g32980.1",{"$nulls":7},"_","OsSTA250","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0167500","LOC_Os11g06690.1",{"$nulls":6},"_","Prol-26, pro13a.6","_",null,12," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0045735 - nutrient reservoir activity, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os12g0269700","LOC_Os12g17030.1",{"$nulls":6},"PAD4","OsPAD4","PHYTOALEXIN DEFICIENT 4","phytoalexin deficient 4",11," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0009617 - response to bacterium, GO:0004806 - triacylglycerol lipase activity, GO:0006629 - lipid metabolic process, GO:0009693 - ethylene biosynthetic process, GO:0010618 - aerenchyma formation, GO:0005886 - plasma membrane, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0042742 - defense response to bacterium, GO:0002213 - defense response to insect","TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0002670 - momilactone A content, TO:0000172 - jasmonic acid sensitivity, TO:0000424 - brown planthopper resistance",null,"Os11g0195500","LOC_Os11g09010.3, LOC_Os11g09010.2, LOC_Os11g09010.1",null,"Os03g0366800","Os01g0817700",1.2706674,0]
[{"$nulls":24},"Os01g0915600","Os03g0300400","Os03g0300400",2.0953,0,null,"Os02g0186500",3.3507252,"Os04g0611400",-1.1769753,{"$nulls":29},"EXPB3","OsEXPB3, osaEXPb1.10, EXPb1.10","BETA-EXPANSIN 3","Expansin-B3, Beta-expansin-3",10," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy","GO:0019953 - sexual reproduction, GO:0007047 - cell wall organization, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005576 - extracellular region, GO:0019898 - extrinsic to membrane, GO:0005618 - cell wall","TO:0000207 - plant height",null,"Os10g0555900","LOC_Os10g40720.1",{"$nulls":7},"_","OsSTA252","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0176300","LOC_Os11g07510.1",{"$nulls":6},"GW5","qSW5/GW5, GSE55, OsGW5, qSW5","GRAIN WIDTH 5","GRAIN SIZE ON CHROMOSOME 5, seed width (QTL)-5",5," Seed - Morphological traits - Grain shape,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity","GO:0010229 - inflorescence development, GO:0019722 - calcium-mediated signaling, GO:0048316 - seed development, GO:0042127 - regulation of cell proliferation, GO:0005886 - plasma membrane","TO:0000402 - grain width, TO:0000621 - inflorescence development trait, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000653 - seed development trait","PO:0009049 - inflorescence , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os05g0187500","LOC_Os05g09520.1",{"$nulls":6},"CERK1","OsCERK1, OsLysM-RLK9, Os-CERK1, Os-LysM-RLK9, OsLysMRLK9, OsCERK1/OsLYK9, OsLYK9, LYK9","CHITIN ELICITOR RECEPTOR KINASE 1","chitin elicitor receptor kinase 1, chitinelicitor receptor kinase-1, LysM receptor-like kinase 9",8," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0009617 - response to bacterium, GO:0051480 - cytosolic calcium ion homeostasis, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0005524 - ATP binding, GO:0010200 - response to chitin, GO:0005886 - plasma membrane, GO:0002237 - response to molecule of bacterial origin, GO:0050850 - positive regulation of calcium-mediated signaling, GO:0032491 - detection of molecule of fungal origin, GO:0004674 - protein serine/threonine kinase activity, GO:0019199 - transmembrane receptor protein kinase activity, GO:0009817 - defense response to fungus, incompatible interaction, GO:0042742 - defense response to bacterium, GO:0032494 - response to peptidoglycan, GO:0005783 - endoplasmic reticulum, GO:0052064 - induction by symbiont of defense-related host reactive oxygen species production, GO:0052033 - pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity, GO:0009603 - detection of symbiotic fungus, GO:0009608 - response to symbiont, GO:0009609 - response to symbiotic bacterium, GO:0009610 - response to symbiotic fungus, GO:0009877 - nodulation, GO:0019722 - calcium-mediated signaling, GO:0045089 - positive regulation of innate immune response, GO:0050832 - defense response to fungus, GO:0043410 - positive regulation of MAPKKK cascade","TO:0000112 - disease resistance, TO:0000315 - bacterial disease resistance, TO:0000439 - fungal disease resistance, TO:0000074 - blast disease","PO:0000258 - root cortex , PO:0006036 - root epidermis ","Os08g0538300","LOC_Os08g42580.4, LOC_Os08g42580.1",null,"Os11g0145400","Os03g0844100",1.2680761,0]
[{"$nulls":24},"Os04g0341900","Os04g0659300","Os04g0659300",2.0896952,0,null,"Os04g0293100",3.3502731,"Os02g0532500",-1.1768322,{"$nulls":29},"GAE1","OsGAE1","GA-ENHANCED GENE 1","gibberellin-regulated gene, GA-enhanced gene 1",1," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Character as QTL - Plant growth activity","GO:0010476 - gibberellin-mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0048608 - reproductive structure development","TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000357 - growth and development trait","PO:0025034 - leaf , PO:0020148 - shoot apical meristem , PO:0005052 - plant callus , PO:0020104 - leaf sheath ","Os01g0201600","LOC_Os01g10490.1",{"$nulls":7},"_","OsSTA254, STA254 OsSEC3B, SEC3B","_","exocyst subunit Sec3, exocyst subunit SEC3B",11," Reproductive organ - Spikelet, flower, glume, awn","GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0051601 - exocyst localization, GO:0006887 - exocytosis, GO:0006893 - Golgi to plasma membrane transport, GO:0005886 - plasma membrane, GO:0000145 - exocyst, GO:0017049 - GTP-Rho binding",null,"PO:0009066 - anther ","Os11g0276000","LOC_Os11g17600.1, LOC_Os11g17600.2, LOC_Os11g17600.3",{"$nulls":6},"FAD2-1","OsFAD2, OsFAD2-1, OsaFAD2-1","FATTY ACID DESATURASE 2-1","fatty acid desaturase 2, microsomal delta-12 fatty acid desaturase, microsomal Delta12-fatty acid desaturase 2-1, fatty acid desaturase 2-1, fatty acid desaturase DES2",2," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0006629 - lipid metabolic process, GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","TO:0000303 - cold tolerance, TO:0000696 - starch content, TO:0005002 - oleic acid content, TO:0000598 - protein content, TO:0000462 - gelatinization temperature, TO:0000281 - metabolite content related trait, TO:0005001 - linoleic acid content",null,"Os02g0716500 ","LOC_Os02g48560.1, LOC_Os02g48560.2, LOC_Os02g48560.6, LOC_Os02g48560.5, LOC_Os02g48560.4, LOC_Os02g48560.3",{"$nulls":6},"CAL1","OsCPT1, CPT1, DEFL7, OsDEFL7, OsDf-07, Df-07, OsPR12, PR12, DEF7, OsDEF7, OsAFP1, AFP1, OsPDF2.2, PDF2.2","CADMIUM ACCUMULATION IN LEAF 1 ","Cp-thionin 1, defensing-like 7, Pathogenesis related gene 12, cadmium accumulation in leaf 1, Cd accumulation in leaf 1",2," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009617 - response to bacterium, GO:0005615 - extracellular space, GO:0055073 - cadmium ion homeostasis, GO:0046870 - cadmium ion binding, GO:0005886 - plasma membrane, GO:0009505 - plant-type cell wall, GO:0009753 - response to jasmonic acid stimulus, GO:0009845 - seed germination, GO:0051047 - positive regulation of secretion, GO:0050832 - defense response to fungus","TO:0000172 - jasmonic acid sensitivity","PO:0000074 - parenchyma cell , PO:0005772 - exodermis , PO:0007616 - flowering stage , PO:0007057 - 0 seed germination stage , PO:0005352 - xylem ","Os02g0629800","LOC_Os02g41904.1",null,"Os03g0329900","Os02g0796300",1.2659178,0]
[{"$nulls":24},"Os07g0630800","Os03g0773600","Os03g0773600",1.9801283,0,null,"Os01g0896200",3.3473082,"Os01g0215500",-1.176582,{"$nulls":29},"GNA1","OsGNA1","GLUCOSAMINE-6-P ACETYLTRANSFERASE 1","glucosamine-6-P acetyltransferase-1",9," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus, GO:0005789 - endoplasmic reticulum membrane, GO:0006045 - N-acetylglucosamine biosynthetic process, GO:0048364 - root development, GO:0006048 - UDP-N-acetylglucosamine biosynthetic process, GO:0004343 - glucosamine 6-phosphate N-acetyltransferase activity","TO:0000227 - root length, TO:0000432 - temperature response trait, TO:0000207 - plant height","PO:0001031 - 4 root elongation stage ","Os09g0488000","LOC_Os09g31310.1",{"$nulls":7},"_","OsSTA256","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0417300","LOC_Os11g22396.1",{"$nulls":6},"_","OsGRP1, GRP1, OsGPRP3, GPRP3","_","glycine-rich cell-wall structural protein 1, glycine- and proline-rich protein 3",5," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity",null,"TO:0000602 - total fat content, TO:0000397 - grain size, TO:0000162 - seed quality, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0002653 - endosperm storage protein content","PO:0009010 - seed ","Os05g0119200","LOC_Os05g02770.1",{"$nulls":6},"PR1-12","OsPR1#012, PR1#012, OsPR1-12, OsPR1.1, PR1.1","PATHOGENESIS-RELATED GENE 1-12","pathogenesis-related protein 1-12, PR protein 1-12",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009617 - response to bacterium, GO:0050832 - defense response to fungus, GO:0005576 - extracellular region","TO:0000129 - false smut disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os01g0382400","LOC_Os01g28500.1",null,"Os09g0440700","Os01g0874300",1.2570273,0]
[{"$nulls":24},"Os11g0609600","Os05g0438500","Os05g0438500",1.9539763,0,null,"Os03g0248300",3.3445618,"Os06g0542100",-1.175412,{"$nulls":29},"HOX4","Oshox4, OsHox4","HOMEOBOX GENE 4","rice homeobox gene 4, Homeobox-leucine zipper protein HOX4, Homeodomain transcription factor HOX4, HD-ZIP protein HOX4, HOMEOBOX4",9," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0009740 - gibberellic acid mediated signaling, GO:0009685 - gibberellin metabolic process, GO:0003677 - DNA binding","TO:0000346 - tiller number, TO:0000207 - plant height",null,"Os09g0470500","LOC_Os09g29460.1",{"$nulls":7},"_","OsSTA257","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0420200","LOC_Os11g22760.1",{"$nulls":6},"B2","OsbHLH016, Kala4, OsKala4, OSB2, OsB2","_","basic helix-loop-helix protein 016, Key gene for\nblack coloration by anthocyanin accumulation on chromosome 4",4," Coloration - Anthocyanin,  Seed,  Seed - Morphological traits","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0031542 - positive regulation of anthocyanin biosynthetic process","TO:0000707 - pericarp color, TO:0000071 - anthocyanin content",null,"Os04g0557500","LOC_Os04g47059.1",{"$nulls":6},"SSI","OsSSI, SSS 1, SSS1, SS1, OsSS1, SSSI, OsSSSI","SOLUBLE STARCH SYNTHASE I","Starch synthase-I, \\Soluble starch synthase 1, chloroplastic/amyloplastic\\\", Starch synthase I\"",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009011 - starch synthase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0019252 - starch biosynthetic process, GO:0009413 - response to flooding","TO:0000488 - seed composition based quality trait, TO:0000286 - submergence sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009010 - seed , PO:0009089 - endosperm , PO:0025034 - leaf , PO:0007632 - seed maturation stage ","Os06g0160700","LOC_Os06g06560.1",null,"Os09g0505600","Os05g0437900",1.2524716,0]
[{"$nulls":24},"Os06g0156600","Os02g0467600","Os02g0467600",1.9195677,0,null,"Os01g0706200",3.3432941,"Os05g0245700",-1.1729784,{"$nulls":29},"NAR2.1","OsNAR2.1, OsNRT3.1A","ACTIVATOR FOR NRT2","activator for NRT2, high-affinity nitrate transporter-activating element 2.1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0042128 - nitrate assimilation, GO:0009610 - response to symbiotic fungus, GO:0015112 - nitrate transmembrane transporter activity, GO:0009611 - response to wounding, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0019740 - nitrogen utilization","TO:0000455 - seed set percent, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000276 - drought tolerance, TO:0000078 - root dry weight, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0001013 - lateral root number, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0000136 - relative water content",null,"Os02g0595900","LOC_Os02g38230.1",{"$nulls":7},"_","OsSTA259","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0496400","LOC_Os11g30350.1",{"$nulls":6},"_","OsbHLH035, bHLH035, OsbHLH35, bHLH35, bHLH107","_","basic helix-loop-helix protein 035",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0046689 - response to mercury ion, GO:0046686 - response to cadmium ion, GO:0009738 - abscisic acid mediated signaling, GO:0009651 - response to salt stress, GO:0010030 - positive regulation of seed germination, GO:0010038 - response to metal ion, GO:0009628 - response to abiotic stimulus, GO:0005634 - nucleus, GO:0010288 - response to lead ion","TO:0000034 - chromium sensitivity, TO:0000168 - abiotic stress trait, TO:0006001 - salt tolerance, TO:0002667 - abscisic acid content","PO:0005052 - plant callus , PO:0009089 - endosperm , PO:0005360 - aleurone layer , PO:0020110 - scutellum , PO:0020033 - coleoptile , PO:0000025 - root tip , PO:0009015 - portion of vascular tissue , PO:0020100 - hypocotyl , PO:0009010 - seed , PO:0009009 - plant embryo ","Os01g0159800","LOC_Os01g06640.3, LOC_Os01g06640.2, LOC_Os01g06640.1",{"$nulls":6},"AGPS2","OsAGPS2a, AGPS2A, AGPS2B, OsAGPS2, osagps2, APS2, APS2a, APS2b, AGPS2a, APGS2b, OsAGPS2b, AGPP, GAS8, OsAPS2, OsAPS2a, OsAPS2b","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 2","sativa ADP-glucose pyrophosphorylase small subunit 2a, sativa ADP-glucose pyrophosphorylase small subunit 2, ADP-glucose Pyrophosphorylase small subunit 2, AGPase small subunit 2, ADP-glucose\npyrophosphorylase small subunit 2a, ADP-glucose pyrophosphorylase 51kD subunit, ADP-glucose pyrophosphorylase small unit 2, ADP-glucose pyrophosphorylase small subunit 2b",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0000003 - reproduction, GO:0009791 - post-embryonic development, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0005978 - glycogen biosynthetic process, GO:0005982 - starch metabolic process, GO:0008878 - glucose-1-phosphate adenylyltransferase activity, GO:0009501 - amyloplast, GO:0009507 - chloroplast, GO:0009536 - plastid, GO:0019252 - starch biosynthetic process, GO:0009415 - response to water","TO:0002661 - seed maturation, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000100 - shrunken endosperm, TO:0000237 - water stress trait, TO:0006001 - salt tolerance, TO:0000011 - nitrogen sensitivity","PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0009089 - endosperm , PO:0007632 - seed maturation stage ","Os08g0345800","LOC_Os08g25734.2, LOC_Os08g25734.1",null,"Os01g0703600","Os08g0490000",1.251965,0]
[{"$nulls":24},"Os03g0140100","Os07g0658300","Os07g0658300",1.8980641,0,null,"Os09g0422500",3.34322,"Os08g0560600",-1.172474,{"$nulls":29},"SPY","OsSPY","SPINDLY","Spindly, Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY",8," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Reproductive organ - panicle","GO:0005634 - nucleus, GO:0009739 - response to gibberellin stimulus, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0005488 - binding, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0009740 - gibberellic acid mediated signaling","TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000201 - panicle color, TO:0000145 - internode length, TO:0000152 - panicle number, TO:0000166 - gibberellic acid sensitivity, TO:0000547 - primary branch number, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000576 - stem length, TO:0006032 - panicle size","PO:0000230 - inflorescence meristem , PO:0009049 - inflorescence , PO:0020142 - stem internode ","Os08g0559300","LOC_Os08g44510.1",{"$nulls":7},"_","OsSTA260","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0524900","LOC_Os11g32210.1",{"$nulls":6},"BLR1","OsbHLH079, OsbHLH79, bHLH079, bHLH79, OsBLR1, OsBCL2, BCL2","BRASSINOSTEROID-RESPONSIVE LEAF ANGLE REGULATOR 1","basic helix-loop-helix protein 079, Basic Helix-Loop-Helix 79, OsBC1-Like2, BC1-Like 2",2," Vegetative organ - Leaf,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0051512 - positive regulation of unidimensional cell growth, GO:0001558 - regulation of cell growth, GO:0048366 - leaf development, GO:0048573 - photoperiodism, flowering, GO:0030308 - negative regulation of cell growth, GO:0009741 - response to brassinosteroid stimulus, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling, GO:0005634 - nucleus, GO:0046983 - protein dimerization activity","TO:0000655 - leaf development trait, TO:0002687 - cell elongation trait, TO:0002675 - gibberellic acid content, TO:0000206 - leaf angle, TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0002730 - grain shape, TO:0000137 - days to heading, TO:0002676 - brassinosteroid content, TO:0000397 - grain size, TO:0000396 - grain yield","PO:0009073 - stigma , PO:0009066 - anther , PO:0009036 - lodicule , PO:0009037 - lemma , PO:0009038 - palea , PO:0009005 - root , PO:0020033 - coleoptile ","Os02g0705500","LOC_Os02g47660.1",{"$nulls":6},"RSUS4","SUS4, SS4, OsScS4, RSs4, RSus4, OsSUS4","SUCROSE SYNTHASE 4","Rice sucrose synthase-4, Sucrose synthase 4, Sucrose-UDP glucosyltransferase 4, Sucrose synthase-4, rice SuSy gene 4",3," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016157 - sucrose synthase activity, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process, GO:0009651 - response to salt stress, GO:0051781 - positive regulation of cell division","TO:0006001 - salt tolerance, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000696 - starch content, TO:0000449 - grain yield per plant, TO:0000592 - 1000-dehulled grain weight, TO:0000011 - nitrogen sensitivity","PO:0007632 - seed maturation stage ","Os03g0340500","LOC_Os03g22120.3, LOC_Os03g22120.2, LOC_Os03g22120.1",null,"Os06g0274000","Os01g0869900",1.2497326,0]
[{"$nulls":24},"Os05g0211100","Os04g0412700","Os04g0412700",1.8935431,0,null,"Os05g0453700",3.3397026,"Os09g0452900",-1.1722927,{"$nulls":29},"SUT1","OsSUT1, OsSUT2","SUCROSE TRANSPORTER 1","Sucrose transporter-1, Sucrose transporter 1",3," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005364 - maltose:hydrogen symporter activity, GO:0051899 - membrane depolarization, GO:0002215 - defense response to nematode, GO:0008506 - sucrose:hydrogen symporter activity, GO:0009413 - response to flooding, GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0015770 - sucrose transport, GO:0008515 - sucrose transmembrane transporter activity, GO:0009846 - pollen germination, GO:0015293 - symporter activity, GO:0042950 - salicin transmembrane transporter activity, GO:0005985 - sucrose metabolic process, GO:0005887 - integral to plasma membrane, GO:0008519 - ammonium transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000401 - plant growth hormone sensitivity, TO:0000286 - submergence sensitivity, TO:0000384 - nematode damage resistance, TO:0000333 - sugar content, TO:0000207 - plant height","PO:0000003 - whole plant ","Os03g0170900","LOC_Os03g07480.4, LOC_Os03g07480.3, LOC_Os03g07480.2, LOC_Os03g07480.1",{"$nulls":7},"_","OsSTA261","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0534300","LOC_Os11g32960.1",{"$nulls":6},"BHLH081","OsbHLH081, bHLH081, OsBC1, BC1","BASIC HELIX-LOOP-HELIX PROTEIN 81","basic helix-loop-helix protein 081, OsBUL1 COMPLEX1, BUL1 COMPLEX 1, BU1-LIKE 1 COMPLEX1, BU-LIKE1 COMPLEX1",9," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape","GO:0051510 - regulation of unidimensional cell growth, GO:0009741 - response to brassinosteroid stimulus","TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000397 - grain size, TO:0002687 - cell elongation trait",null,"Os09g0510500","LOC_Os09g33580.1, LOC_Os09g33580.2",{"$nulls":6},"TA2","ROS1A, ROS1a, DME1, OsROS1A, OsROS1, ROS1, mOsROS1","THICK ALEURONE 2","REPRESSOR OF SILENCING 1a, REPRESSOR OF SILENCING 1, thick aleurone 2",1," Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009553 - embryo sac development, GO:0009555 - pollen development, GO:0009790 - embryonic development, GO:0009960 - endosperm development, GO:0010162 - seed dormancy, GO:0005634 - nucleus, GO:0048229 - gametophyte development, GO:0080111 - DNA demethylation, GO:0006284 - base-excision repair, GO:0046872 - metal ion binding, GO:0007292 - female gamete generation, GO:0048232 - male gamete generation, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0003677 - DNA binding, GO:0046686 - response to cadmium ion, GO:0016787 - hydrolase activity","TO:0000253 - seed dormancy, TO:0000184 - seed anatomy and morphology trait, TO:0000598 - protein content, TO:0000465 - mineral and ion content related trait, TO:0002642 - dietary fiber related trait, TO:0000104 - floury endosperm, TO:0000602 - total fat content, TO:0000345 - seed viability, TO:0000421 - pollen fertility, TO:0001024 - phosphorus content, TO:0005002 - oleic acid content, TO:0005001 - linoleic acid content","PO:0001007 - pollen development stage ","Os01g0218032","LOC_Os01g11900.1",null,"Os07g0161600","Os03g0223100",1.2419072,0]
[{"$nulls":24},"Os02g0638900","Os05g0456500","Os05g0456500",1.8740083,0,null,"Os01g0540300",3.3345985,"Os07g0262200",-1.1710991,{"$nulls":29},"PSR1","PSR1, NiR, OsNiR, OsNIR1, NIR1, FD-NiR, OsNiR2","PROMOTOR OF SHOOT REGENERATION 1","Promotor of shoot regeneration-1, ferredoxin-nitrite reductase, \\Ferredoxin--nitrite reductase, chloroplastic\\\"\"",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0042128 - nitrate assimilation, GO:0020037 - heme binding, GO:0006810 - transport, GO:0022900 - electron transport chain, GO:0019740 - nitrogen utilization, GO:0046872 - metal ion binding, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0048307 - ferredoxin-nitrite reductase activity","TO:0000371 - yield trait, TO:0000557 - secondary branch number, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000346 - tiller number",null,"Os01g0357100","LOC_Os01g25484.3, LOC_Os01g25484.2, LOC_Os01g25484.1",{"$nulls":7},"_","OsSTA262","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0539000","LOC_Os11g33250.1",{"$nulls":6},"_","OsbHLH090","_","basic helix-loop-helix protein 090",1," Seed,  Other","GO:0005634 - nucleus","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os01g0915600","LOC_Os01g68700.1, LOC_Os01g68700.2",{"$nulls":6},"SAUR11","OsSAUR11","SMALL AUXIN-UP RNA 11","Small auxin-up RNA 11",2," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009733 - response to auxin stimulus","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity",null,"Os02g0643800","LOC_Os02g42990.1",null,"Os02g0628800","Os02g0755000",1.2398332,0]
[{"$nulls":24},"Os06g0641500","Os01g0679500","Os01g0679500",1.8583039,0,null,"Os01g0651800",3.331546,"Os03g0748000",-1.1706415,{"$nulls":29},"qPh","qPh","PLANT HEIGHT","plant height",null," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA263","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0575900","LOC_Os11g36740.1",{"$nulls":6},"LGS1","OsbHLH107, bHLH107","LARGER GRAIN SIZE 1","basic helix-loop-helix protein 107, larger grain size 1",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0046983 - protein dimerization activity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000396 - grain yield, TO:0000397 - grain size",null,"Os02g0805250","LOC_Os02g56140.1",{"$nulls":6},"MIF1","OsMIF1","MINI ZINC FINGER 1","mini zinc finger 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0046872 - metal ion binding, GO:0003700 - transcription factor activity, GO:0080006 - internode patterning, GO:0009739 - response to gibberellin stimulus","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity",null,"Os11g0128300","LOC_Os11g03420.1",null,"Os02g0816900","Os01g0106900",1.2300868,0]
[{"$nulls":24},"Os03g0782500","Os05g0244700","Os05g0244700",1.8530831,0,null,"Os04g0483200",3.3282812,"Os04g0468600",-1.1685458,{"$nulls":29},"qSH1","qSH1, qsh1, qSH-1, RIL1, OsRIL1","Shattering (QTL)-1","QTL of seed shattering in chromosome 1, RI-LIKE1, erticillate rachis-like 1",1," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Seed - Physiological traits - Shattering","GO:0010492 - maintenance of shoot apical meristem identity, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0080006 - internode patterning, GO:0010073 - meristem maintenance, GO:0003677 - DNA binding","TO:0000547 - primary branch number, TO:0000207 - plant height, TO:0000142 - secondary branching of inflorescence, TO:0006020 - shoot apical meristem development, TO:0006014 - phyllotaxy, TO:0000145 - internode length, TO:0000473 - grain shattering",null,"Os01g0848400","LOC_Os01g62920.1",{"$nulls":7},"_","OsSTA264, STA264, Duf6, qSCT11","_","QTL for seedling cold tolerance on chromosome 11",11," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0022857 - transmembrane transporter activity, GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0009066 - anther ","Os11g0588100","LOC_Os11g37720.1",{"$nulls":6},"_","OsbHLH144, OsEnS-65, bHLH144, EnS-65, OsZOU-1, OsZOU1, ZOU-1, ZOU1","_","basic helix-loop-helix protein 144, endosperm-specific gene 65, ZHOUPI 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Endosperm","GO:0009790 - embryonic development, GO:0042335 - cuticle development, GO:0009960 - endosperm development, GO:0048316 - seed development","TO:0002627 - fruit width, TO:0000420 - fertility related trait, TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0002681 - leaf curling, TO:0000370 - leaf width, TO:0020034 - glume width","PO:0007633 - endosperm development stage , PO:0001170 - seed development stage , PO:0009089 - endosperm , PO:0009010 - seed ","Os04g0429400","LOC_Os04g35010.1",{"$nulls":6},"GRAS46","OsGRAS44, OsGRAS-44, GRAS-44, GRAS44, OsGRAS-46, OsGRAS46, GRAS-46","GRAS PROTEIN 46","GRAS family transcription factor domain-containing protein 44, GRAS protein 46",11," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding","TO:0000255 - sheath blight disease resistance",null,"Os11g0705200","LOC_Os11g47870.1",null,"Os04g0346100","Os01g0560000",1.2287645,0]
[{"$nulls":24},"Os02g0174300","Os07g0663800","Os07g0663800",1.7915686,0,null,"Os12g0446300",3.325945,"Os03g0823700",-1.1662737,{"$nulls":29},"SNB","AP2/EREBP#073, AP2/EREBP73, AP2-3, SSH1, OsSSH1, OsSNB, DLN181, DLN181a, DLN181b, OsDLN181, OsDLN181a, OsDLN181b, SUI4, OsSUI4, SUI4/SNB","SUPERNUMERARY BRACT GENE","Supernumerary Bract gene, Supernumerary Bract, SUPERNUMERARY BRACT, supernumerary bract, transcription factor; SNB, APETALA2/ethylene-responsive element binding protein 73, APETALA2-3, suppression of shattering1, DLN repressor 181, DLN motif protein 181, shortened uppermost internode 4",7," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Shattering,  Character as QTL - Yield and productivity,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0001558 - regulation of cell growth, GO:0009736 - cytokinin mediated signaling, GO:0009740 - gibberellic acid mediated signaling, GO:0009908 - flower development, GO:0010077 - maintenance of inflorescence meristem identity, GO:0005634 - nucleus, GO:0045449 - regulation of transcription, GO:0009832 - plant-type cell wall biogenesis, GO:0080006 - internode patterning, GO:0010022 - meristem determinacy, GO:0003700 - transcription factor activity, GO:0048506 - regulation of timing of meristematic phase transition, GO:0010092 - specification of organ identity","TO:0000225 - stamen number, TO:0000207 - plant height, TO:0000209 - palea number, TO:0000671 - pre-flowering flower abortion, TO:0006032 - panicle size, TO:0000436 - spikelet sterility, TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000391 - seed size, TO:0006030 - spikelet meristem identity, TO:0000397 - grain size, TO:0000382 - 1000-seed weight, TO:0000622 - flower development trait, TO:0000650 - lemma length, TO:0000208 - lemma number, TO:0000499 - flower anatomy and morphology trait, TO:0000145 - internode length","PO:0006327 - spikelet meristem , PO:0009029 - stamen , PO:0009030 - carpel , PO:0009034 - flower bract , PO:0009036 - lodicule , PO:0009039 - glume , PO:0007615 - flower development stage ","Os07g0235800","LOC_Os07g13170.2, LOC_Os07g13170.1",{"$nulls":7},"_","OsSTA266","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os11g40650",{"$nulls":6},"_","OsGZF1","_","GluB-1-binding Zinc Finger 1",7," Seed - Physiological traits - Storage substances","GO:0046872 - metal ion binding","TO:0000490 - protein composition related trait",null,"Os07g0668600","LOC_Os07g47240.1",{"$nulls":6},"GRAS49","OsGRAS-49, OsGRAS49, GRAS-49, OsGRAS47, GRAS47","GRAS PROTEIN 49","GRAS protein 49",11," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance","PO:0009046 - flower , PO:0009005 - root ",{"$nulls":3},"Os08g0199300","Os04g0462500",1.224092,0]
[{"$nulls":24},"Os09g0433000","Os02g0577100","Os02g0577100",1.7407871,0,null,"Os02g0657000",3.3227575,"Os02g0734500",-1.1643081,{"$nulls":29},"TDR1","tdr1","TILLERING DWARF RICE 1","tillering dwarf rice-1",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA267","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0624400","LOC_Os11g40800.1",{"$nulls":6},"GPA3","OsGPA3","GLUTELIN PRECURSOR ACCUMULATION 3","GLUTELIN PRECURSOR ACCUMULATION3, glutelin precursor accumulation 3",3," Seed - Physiological traits - Storage substances",null,"TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content",null,"Os03g0835800","LOC_Os03g61950.1, LOC_Os03g61950.2",{"$nulls":6},"GRAS55","OsGRAS-55, OsGRAS55, GRAS-55, PsiOsGRAS10, PsiGRAS10","GRAS PROTEIN 55","GRAS protein 55",12," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os12g0162700","LOC_Os12g06540.1",null,"Os09g0413500","Os10g0378300",1.2237464,0]
[{"$nulls":24},"Os09g0346500","Os05g0557100","Os05g0557100",1.6314515,0,null,"Os03g0730400",3.3220737,"Os06g0724600",-1.1643081,{"$nulls":29},"TDR2","tdr2","TILLERING DWARF RICE 2","tillering dwarf rice 2",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA268","_",null,11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os11g41550",{"$nulls":6},"GIF1","OsGIF1","GRF-INTERACTING FACTOR 1","GRF-interacting factor 1",11," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000240 - sterile lemma length, TO:0000397 - grain size",null,"Os11g0615200","LOC_Os11g40100.3, LOC_Os11g40100.2, LOC_Os11g40100.1",{"$nulls":6},"PSIGRAS2","PsiOsGRAS2, PsiGRAS2","PSI GRAS PROTEIN 2",null,2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium","TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance",null,null,"LOC_Os02g21685.1",null,"Os07g0130100","Os08g0101000",1.216268,0]
[{"$nulls":24},"Os11g0496600","Os02g0743700","Os02g0743700",1.6250935,0,null,"Os06g0729650",3.321844,"Os12g0162100",-1.1642562,{"$nulls":29},"WRKY11","OsWRKY11, Dlf1, OsWRKY11.1, OsWRKY11.2","WRKY GENE11","Rice WRKY gene11, semidwarf and late flowering 1",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:2000028 - regulation of photoperiodism, flowering, GO:0009739 - response to gibberellin stimulus, GO:0009609 - response to symbiotic bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009408 - response to heat","TO:0000175 - bacterial blight disease resistance, TO:0000188 - drought sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0002616 - flowering time, TO:0000259 - heat tolerance",null,"Os01g0626400","LOC_Os01g43650.1, LOC_Os01g43650.2",{"$nulls":7},"_","OsSTA272","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os12g04340",{"$nulls":6},"_","OsRMR3, OsRMR1, RMR1","_","receptor-like membrane Ring-H2 3, receptor homology region-transmembrane domain-RING-H2 (RMR) protein 1, ReMembR-H2 Protein 1",3," Biochemical character,  Seed - Physiological traits - Storage substances","GO:0016021 - integral to membrane, GO:0031902 - late endosome membrane, GO:0015031 - protein transport, GO:0032586 - protein storage vacuole membrane, GO:0000139 - Golgi membrane, GO:0008270 - zinc ion binding","TO:0002653 - endosperm storage protein content",null,"Os03g0167500","LOC_Os03g07130.1, LOC_Os03g07130.2, LOC_Os03g07130.3, LOC_Os03g07130.4, LOC_Os03g07130.5",{"$nulls":6},"PSIGRAS9","PsiOsGRAS9, PsiGRAS9","PSI GRAS PROTEIN 9",null,11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress","TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,null,"LOC_Os11g11600.1",null,"Os09g0567300","Os05g0198400",1.2145969,0]
[{"$nulls":24},"Os07g0160100","Os11g0655900","Os11g0655900",1.604597,0,null,"Os02g0709300",3.3212204,"Os02g0782100",-1.1639978,{"$nulls":29},"WRKY19","OsWRKY19","WRKY GENE 19","Rice WRKY gene19",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009790 - embryonic development, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0050832 - defense response to fungus","TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os05g0571200","LOC_Os05g49620.1",{"$nulls":7},"_","OsSTA274","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0164600","LOC_Os12g06780.1",{"$nulls":6},"_","OsRMR2","_","receptor homology region-transmembrane domain-RING-H2 (RMR) protein 2, ReMembR-H2 Protein 2",8," Biochemical character,  Seed - Physiological traits - Storage substances","GO:0016021 - integral to membrane, GO:0031902 - late endosome membrane, GO:0032586 - protein storage vacuole membrane, GO:0008270 - zinc ion binding, GO:0015031 - protein transport","TO:0002653 - endosperm storage protein content",null,"Os08g0104300 ","LOC_Os08g01360.1, LOC_Os08g01360.2, LOC_Os08g01360.3",{"$nulls":6},"CEBiP","CEBIP, Os-LYP1, LYP1, OsCEBiP","CHITIN ELICITOR BINDING PROTEIN","Chitin elicitor-binding protein, chitin-elicitor binding protein, lysin motif-containing protein 1, chitin oligosaccharide elicitor-binding protein",3," Tolerance and resistance - Disease resistance","GO:0009617 - response to bacterium, GO:0006952 - defense response, GO:0008061 - chitin binding, GO:0016021 - integral to membrane, GO:0016998 - cell wall macromolecule catabolic process, GO:0002238 - response to molecule of fungal origin, GO:0032491 - detection of molecule of fungal origin, GO:0050832 - defense response to fungus, GO:0019722 - calcium-mediated signaling, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000112 - disease resistance, TO:0000439 - fungal disease resistance",null,"Os03g0133400","LOC_Os03g04110.2, LOC_Os03g04110.1",null,"Os01g0276800","Os05g0523300",1.2101922,0]
[{"$nulls":24},"Os11g0265800","Os03g0245100","Os03g0245100",1.5672809,0,null,"Os10g0404900",3.3204067,"Os04g0521700",-1.1623472,{"$nulls":29},"WRKY55","OsWRKY55","WRKY GENE 55","Rice WRKY gene55",3," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0016049 - cell growth, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0034059 - response to anoxia","TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height","PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0020103 - flag leaf , PO:0009005 - root ","Os03g0321700","LOC_Os03g20550.3, LOC_Os03g20550.2, LOC_Os03g20550.1",{"$nulls":7},"_","OsSTA275","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os12g07840.1",{"$nulls":6},"DU12","du12(t)","DULL ENDOSPERM 12","Dull endosperm-12",6," Seed - Physiological traits - Storage substances",null,"TO:0000196 - amylose content, TO:0000105 - dull endosperm",{"$nulls":9},"SGR","sgr(t), sgr, OsSGR, OsSgr, SGR1, OsSGR1","STAY GREEN LEAF","stay green leaf (t), stay green, staying green during senescence, Stay-Green",9," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009749 - response to glucose stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009645 - response to low light intensity stimulus, GO:0050832 - defense response to fungus, GO:0032026 - response to magnesium ion, GO:0042594 - response to starvation, GO:0010150 - leaf senescence, GO:0009413 - response to flooding, GO:0015996 - chlorophyll catabolic process, GO:0009536 - plastid, GO:0010304 - PSII associated light-harvesting complex II catabolic process, GO:0009646 - response to absence of light, GO:0042542 - response to hydrogen peroxide, GO:0009507 - chloroplast","TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000495 - chlorophyll content, TO:0000396 - grain yield, TO:0002712 - stay green trait, TO:0000524 - submergence tolerance, TO:0000326 - leaf color, TO:0000298 - chlorophyll ratio, TO:0000249 - leaf senescence, TO:0000075 - light sensitivity, TO:0000010 - magnesium sensitivity","PO:0009025 - vascular leaf , PO:0001054 - 4 leaf senescence stage ","Os09g0532000","LOC_Os09g36200.1",null,"Os06g0301000","Os09g0364800",1.1981024,0]
[{"$nulls":24},"Os04g0530900","Os07g0550600","Os07g0550600",1.4781342,0,null,"Os12g0138800",3.32003,"Os12g0102700",-1.161974,{"$nulls":29},"WRKY74","OsWRKY74","WRKY GENE 74","Rice WRKY gene74",9," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0043565 - sequence-specific DNA binding, GO:0016036 - cellular response to phosphate starvation, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0010106 - cellular response to iron ion starvation, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0006995 - cellular response to nitrogen starvation, GO:0009408 - response to heat","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000011 - nitrogen sensitivity, TO:0000043 - root anatomy and morphology trait","PO:0009005 - root , PO:0025034 - leaf ","Os09g0334500","LOC_Os09g16510.1",{"$nulls":7},"_","OsSTA278","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0288000","LOC_Os12g18960.1, LOC_Os12g18960.2",{"$nulls":6},"_","Chalk5","_","Pyrophosphate-energized vacuolar membrane proton pump",5," Biochemical character,  Seed - Physiological traits","GO:0016020 - membrane, GO:0015992 - proton transport, GO:0004427 - inorganic diphosphatase activity, GO:0009678 - hydrogen-translocating pyrophosphatase activity","TO:0000266 - chalky endosperm",null,"Os05g0156900","LOC_Os05g06480.1",{"$nulls":6},"JAR1","OsJAR1, OsGH3.5, GH3.5, OsGH3-5, GH3-5","JASMONYL-L-ISOLEUCINE SYNTHASE 1","jasmonyl-L-isoleucine synthase 1, JASMONATE RESISTANT 1, GRETCHEN HAGEN 3.5",5," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0046688 - response to copper ion, GO:0052315 - phytoalexin biosynthetic process, GO:0009695 - jasmonic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0080123 - jasmonate-amino synthetase activity, GO:0005773 - vacuole, GO:0009507 - chloroplast, GO:0009585 - red, far-red light phototransduction, GO:0009627 - systemic acquired resistance, GO:0009733 - response to auxin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009640 - photomorphogenesis, GO:0009694 - jasmonic acid metabolic process, GO:0009734 - auxin mediated signaling pathway, GO:0009861 - jasmonic acid and ethylene-dependent systemic resistance, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0010119 - regulation of stomatal movement, GO:0010193 - response to ozone, GO:0031348 - negative regulation of defense response, GO:0070566 - adenylyltransferase activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009901 - anther dehiscence, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000172 - jasmonic acid sensitivity, TO:0000164 - stress trait, TO:0000206 - leaf angle, TO:0002672 - auxin content, TO:0000179 - biotic stress trait, TO:0002668 - jasmonic acid content, TO:0002669 - diterpenoid phytoalexin content, TO:0000021 - copper sensitivity, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000420 - fertility related trait, TO:0000474 - glume opening, TO:0000609 - potassium content, TO:0006001 - salt tolerance","PO:0007616 - flowering stage , PO:0009066 - anther , PO:0009006 - shoot system ","Os05g0586200 ","LOC_Os05g50890.1, LOC_Os05g50890.3, LOC_Os05g50890.2",null,"Os02g0823300","Os03g0160100",1.1912669,0]
[{"$nulls":24},"Os03g0751400","Os02g0739000","Os02g0739000",1.4014984,0,null,"Os04g0487700",3.319749,"Os06g0622800",-1.1607436,{"$nulls":29},"PH4","Ph4","PLANT HEIGHT 4","Plant height 4",12," Vegetative organ - Culm,  Character as QTL - Plant growth activity",{"$nulls":12},"PGLP3","OsSTA280, OsPGLP3","PHOSPHOGLYCOLATE PHOSPHATASE 3",null,12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016791 - phosphatase activity, GO:0009507 - chloroplast",null,"PO:0009066 - anther ","Os12g0420000","LOC_Os12g23150.1",{"$nulls":6},"FLO16","CMDH, OscMDH, cMDH, OsMDH, MDH, OsFLO16","FLOURY ENDOSPERM16","cytoplasmic malate dehydrogenase, malate dehydrogenase, NAD-dependent cytosolic malate dehydrogenase",10," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005634 - nucleus, GO:0005886 - plasma membrane, GO:0006099 - tricarboxylic acid cycle, GO:0005829 - cytosol, GO:0046686 - response to cadmium ion, GO:0044262 - cellular carbohydrate metabolic process, GO:0030060 - L-malate dehydrogenase activity, GO:0005774 - vacuolar membrane, GO:0009960 - endosperm development, GO:0042592 - homeostatic process, GO:0010043 - response to zinc ion, GO:0009651 - response to salt stress, GO:0009506 - plasmodesma, GO:0051775 - response to redox state, GO:0009570 - chloroplast stroma, GO:0048316 - seed development, GO:0048046 - apoplast, GO:0006108 - malate metabolic process","TO:0000100 - shrunken endosperm, TO:0000196 - amylose content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000602 - total fat content, TO:0000328 - sucrose content, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content, TO:0000104 - floury endosperm, TO:0000346 - tiller number","PO:0001170 - seed development stage , PO:0007633 - endosperm development stage , PO:0020104 - leaf sheath ","Os10g0478200","LOC_Os10g33800.3, LOC_Os10g33800.1, LOC_Os10g33800.2",{"$nulls":6},"EG2","OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, JAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2","EXTRA GLUME 2","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 10, extra glume 2, TIFY gene 3",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010582 - floral meristem determinacy, GO:0048449 - floral organ formation, GO:0031347 - regulation of defense response","TO:0000172 - jasmonic acid sensitivity, TO:0000657 - spikelet anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000040 - panicle length",null,"Os04g0653000","LOC_Os04g55920.5, LOC_Os04g55920.1, LOC_Os04g55920.2",null,"Os04g0654700","Os03g0583900",1.1832548,0]
[{"$nulls":24},"Os05g0242400","Os08g0501300","Os08g0501300",1.3918935,0,null,"Os11g0703500",3.3169966,"Os07g0674200",-1.1605240000000001,{"$nulls":29},"PH3","Ph3","PLANT HEIGHT 3","Plant height 3",6," Vegetative organ - Culm,  Character as QTL - Plant growth activity",{"$nulls":12},"_","OsSTA283","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0500900","LOC_Os12g31670.1",{"$nulls":6},"_","GER7, OsGLP3-7, GLP3-7","_","germin-like protein 7, german-like protein 3-7",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0048046 - apoplast","TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os03g0804500","LOC_Os03g58980.1",{"$nulls":6},"BHLH6","OsbHLH006, bHLH006, OsbHLH6, bHLH6, RERJ1, OsRERJ1, bHLH35","BASIC HELIX-LOOP-HELIX PROTEIN 6","basic helix-loop-helix protein 006, Transcription factor bHLH35",4," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0002238 - response to molecule of fungal origin, GO:0010200 - response to chitin, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0050832 - defense response to fungus, GO:0031347 - regulation of defense response, GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0055062 - phosphate ion homeostasis, GO:0042594 - response to starvation, GO:0016036 - cellular response to phosphate starvation, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000207 - plant height, TO:0000074 - blast disease, TO:0000576 - stem length, TO:0000227 - root length, TO:0002665 - root hair length, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance","PO:0009006 - shoot system , PO:0009005 - root ","Os04g0301500","LOC_Os04g23550.2, LOC_Os04g23550.1",null,"Os12g0142900","Os01g0856500",1.1745979,0]
[{"$nulls":24},"Os10g0477600","Os03g0566600","Os03g0566600",1.386735,0,null,"Os04g0626400",3.3099449,"Os07g0511500",-1.1601919,{"$nulls":29},"PH2","Ph2","PLANT HEIGHT 2","Plant height 2",5," Vegetative organ - Culm,  Character as QTL - Plant growth activity",{"$nulls":12},"_","OsSTA284","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os12g32310",{"$nulls":6},"MGD2","OsMGD, MGD, OsMGD2","MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2","Monogalactosyldiacylglycerol synthase, MGDG synthase, MGDG synthase 2",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0045017 - glycerolipid biosynthetic process, GO:0046509 - 1,2-diacylglycerol 3-beta-galactosyltransferase activity, GO:0009658 - chloroplast organization, GO:0030246 - carbohydrate binding, GO:0030259 - lipid glycosylation, GO:0042594 - response to starvation, GO:0010044 - response to aluminum ion, GO:0016036 - cellular response to phosphate starvation, GO:0019374 - galactolipid metabolic process, GO:0009507 - chloroplast, GO:0006794 - phosphorus utilization, GO:0030912 - response to deep water, GO:0009908 - flower development, GO:0009739 - response to gibberellin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress, GO:0009535 - chloroplast thylakoid membrane, GO:0048316 - seed development, GO:0006631 - fatty acid metabolic process, GO:0009247 - glycolipid biosynthetic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009416 - response to light stimulus","TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000293 - chlorophyll-a content, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000371 - yield trait, TO:0000286 - submergence sensitivity, TO:0000627 - relative phosphorus utilization efficiency, TO:0000604 - fat and essential oil content, TO:0000102 - phosphorus sensitivity, TO:0000162 - seed quality, TO:0005001 - linoleic acid content, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length","PO:0001170 - seed development stage , PO:0009066 - anther , PO:0009089 - endosperm , PO:0009010 - seed , PO:0025034 - leaf , PO:0007615 - flower development stage ","Os02g0802700","LOC_Os02g55910.2, LOC_Os02g55910.1",{"$nulls":6},"AMTR1","Osh36, OsH36, H36, OsAMTR1","AMINOTRANSFERASE 1","alanine:glyoxylate aminotransferase-like protein, aminotransferase 1",5," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009749 - response to glucose stimulus, GO:0009646 - response to absence of light, GO:0010150 - leaf senescence, GO:0008483 - transaminase activity, GO:0030170 - pyridoxal phosphate binding, GO:0009414 - response to water deprivation, GO:0006979 - response to oxidative stress, GO:0008152 - metabolic process, GO:0009651 - response to salt stress, GO:0080134 - regulation of response to stress","TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress","PO:0001054 - 4 leaf senescence stage ","Os05g0475400","LOC_Os05g39770.2, LOC_Os05g39770.1",null,"Os01g0922800","Os05g0207500",1.1615924,0]
[{"$nulls":24},"Os03g0701500","Os04g0578400","Os04g0578400",1.3572283,0,null,"Os06g0205100",3.309496,"Os07g0542400",-1.1601444,{"$nulls":29},"PH1","Ph1","PLANT HEIGHT 1","Plant height 1",1," Vegetative organ - Culm,  Character as QTL - Plant growth activity",{"$nulls":12},"_","OsSTA285","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0509600","LOC_Os12g32520.1",{"$nulls":6},"NAC20","ONAC020, ONAC20, DLN1, OsDLN1","NAC DOMAIN-CONTAINING PROTEIN 20","NAC domain-containing protein 020, NAC domain-containing protein 20, DLN repressor 1, DLN motif protein 1",1," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Other","GO:0019252 - starch biosynthetic process, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000696 - starch content, TO:0002653 - endosperm storage protein content, TO:0000598 - protein content, TO:0000484 - seed shape","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0009009 - plant embryo ","Os01g0104500","LOC_Os01g01470.1",{"$nulls":6},"RCCR1","OsRCCR1, OsRCCR, RCCR","RED CHLOROPHYLL CATABOLITE REDUCTASE 1","red chlorophyll catabolite reductase 1",10," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0015996 - chlorophyll catabolic process, GO:0009413 - response to flooding, GO:0051607 - defense response to virus, GO:0010150 - leaf senescence","TO:0000524 - submergence tolerance, TO:0000249 - leaf senescence, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance","PO:0001054 - 4 leaf senescence stage ","Os10g0389200","LOC_Os10g25030.1",null,"Os03g0259300","Os08g0241400",1.1548616,0]
[{"$nulls":24},"Os01g0191800","Os05g0344400","Os05g0344400",1.2900991,0,null,"Os01g0283700",3.307972,"Os01g0254100",-1.1587647,{"$nulls":29},"PIN1B","PIN1A, OsPIN1A, OsPIN1a, REH1, OsPIN1, OsPIN1b, REH1/OsPIN1","PIN PROTEIN 1B","PIN PROTEIN 1A, the rice homolog of A. thaliana EIR1, PIN-FORMED 1b, PIN-formed 1, rice ethylene insensitive root 1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045177 - apical part of cell, GO:0005215 - transporter activity, GO:0010229 - inflorescence development, GO:0048830 - adventitious root development, GO:0009630 - gravitropism, GO:0016021 - integral to membrane, GO:0010358 - leaf shaping, GO:0009638 - phototropism, GO:0009505 - plant-type cell wall, GO:0009733 - response to auxin stimulus, GO:0006810 - transport, GO:0009725 - response to hormone stimulus, GO:0048449 - floral organ formation, GO:0010051 - xylem and phloem pattern formation, GO:0051607 - defense response to virus, GO:0010338 - leaf formation, GO:0009908 - flower development, GO:0016020 - membrane, GO:0009506 - plasmodesma, GO:0009735 - response to cytokinin stimulus, GO:0009926 - auxin polar transport, GO:0048826 - cotyledon morphogenesis, GO:0009734 - auxin mediated signaling pathway, GO:0005737 - cytoplasm, GO:0009925 - basal plasma membrane, GO:0055085 - transmembrane transport, GO:0048364 - root development, GO:0009921 - auxin efflux carrier complex","TO:0000329 - tillering ability, TO:0002639 - shoot branching, TO:0000656 - root development trait, TO:0002672 - auxin content, TO:0000017 - anatomy and morphology related trait, TO:0002652 - root phototropism, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000011 - nitrogen sensitivity, TO:0000257 - root branching, TO:0006022 - floral organ development trait, TO:0000167 - cytokinin sensitivity","PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007600 - floral organ differentiation stage , PO:0000019 - gynoecium primordium , PO:0009066 - anther , PO:0025488 - flower bract primordium , PO:0009037 - lemma , PO:0008013 - anther vascular system ","Os02g0743400","LOC_Os02g50960.2, LOC_Os02g50960.1",{"$nulls":7},"_","OsSTA286","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0570500","LOC_Os12g38260.1",{"$nulls":6},"NAC91","ONAC091, ONAC91","NAC DOMAIN-CONTAINING PROTEIN 91","NAC domain-containing protein 091, NAC domain-containing protein 91",6," Seed,  Other","GO:0010332 - response to gamma radiation, GO:0003677 - DNA binding, GO:0040020 - regulation of meiosis, GO:0006355 - regulation of transcription, DNA-dependent, GO:0000077 - DNA damage checkpoint","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os06g0267500",{"$nulls":7},"BHLH9","OsbHLH009, bHLH009, OsMYC2, MYC2","BASIC HELIX-LOOP-HELIX PROTEIN 9","basic helix-loop-helix protein 009, Myelocytomatosis oncogene transcription factor 2",10," Vegetative organ - Leaf,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009742 - brassinosteroid mediated signaling, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0006952 - defense response, GO:0009269 - response to desiccation, GO:0009963 - positive regulation of flavonoid biosynthetic process, GO:0010200 - response to chitin, GO:0043619 - regulation of transcription from RNA polymerase II promoter in response to oxidative stress, GO:0009718 - anthocyanin biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009689 - induction of phytoalexin biosynthetic process, GO:0002213 - defense response to insect, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0010150 - leaf senescence, GO:0051090 - regulation of transcription factor activity, GO:0009646 - response to absence of light, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0031348 - negative regulation of defense response, GO:0010100 - negative regulation of photomorphogenesis, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0046983 - protein dimerization activity, GO:0003677 - DNA binding","TO:0002677 - brassinosteroid sensitivity, TO:0000148 - viral disease resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000657 - spikelet anatomy and morphology trait, TO:0000261 - insect damage resistance, TO:0000249 - leaf senescence, TO:0000075 - light sensitivity, TO:0000495 - chlorophyll content, TO:0000621 - inflorescence development trait, TO:0000112 - disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000276 - drought tolerance, TO:0000020 - black streak dwarf virus resistance","PO:0001054 - 4 leaf senescence stage , PO:0001083 - inflorescence development stage , PO:0009047 - stem ","Os10g0575000","LOC_Os10g42430.1",null,"Os10g0537400","Os06g0713800",1.1527869,0]
[{"$nulls":24},"Os09g0481800","Os06g0198500","Os06g0198500",1.268298,0,null,"Os02g0166800",3.3069847,"Os11g0528200",-1.1581198,{"$nulls":29},"TS1","TS1","TWISTED STEM 1",null,1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA288","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0606600","LOC_Os12g41350.1, LOC_Os12g41350.2",{"$nulls":6},"MYB19 ","R2R3-MYB, OsMYB19","MYB TRANSCRIPTION FACTOR 19","MYB domain protein",1," Seed,  Other","GO:0003677 - DNA binding, GO:0003682 - chromatin binding","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os01g0850400","LOC_Os01g63160.1",{"$nulls":6},"CPS4","OsCPS4, CYC1, OsCYC1, OsCyc1, cpsl3, OsCPSL3, OsCPSsyn, OsCyc1/OsCPS4, OsTPS15, Os-CPS4","ENT-COPALYL DIPHOSPHATE SYNTHASE 4","rice ent-copalyl diphosphate (CDP) synthase4, ent-copalyl diphosphate synthase 4, ent-copalyl diphosphate synthase like 3, syn-copalyl diphosphate synthase, syn-copalyl diphosphate synthase, cyclase1, cyclase 1, syn-CDP synthase, terpene synthase 15",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009609 - response to symbiotic bacterium, GO:0051498 - syn-copalyl diphosphate synthase activity, GO:0016829 - lyase activity, GO:0009411 - response to UV, GO:0008152 - metabolic process, GO:0051504 - diterpene phytoalexin precursor biosynthetic process pathway, GO:0000287 - magnesium ion binding, GO:0009536 - plastid, GO:0006952 - defense response, GO:0009685 - gibberellin metabolic process, GO:0042742 - defense response to bacterium, GO:0009975 - cyclase activity, GO:0050832 - defense response to fungus, GO:0010039 - response to iron ion","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000160 - UV light sensitivity, TO:0000599 - enzyme activity, TO:0000357 - growth and development trait, TO:0002670 - momilactone A content, TO:0002671 - momilactone B content, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000624 - allelopathic effect, TO:0000439 - fungal disease resistance, TO:0000224 - iron sensitivity","PO:0009005 - root ","Os04g0178300","LOC_Os04g09900.3, LOC_Os04g09900.2, LOC_Os04g09900.1",null,"Os02g0187100","Os10g0562700",1.1526028,0]
[{"$nulls":24},"Os02g0177900","Os12g0541700","Os12g0541700",1.217776,0,null,"Os03g0143200",3.3053093,"Os06g0274500",-1.1578078,{"$nulls":29},"TS2","TS2","TWISTED STEM 2",null,1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA290","_",null,12," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os12g0621500","LOC_Os12g42660.1",{"$nulls":6},"_",null,"_","MYB domain protein",3," Seed,  Other","GO:0003677 - DNA binding, GO:0003682 - chromatin binding","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os03g0425800","LOC_Os03g31230.1, LOC_Os03g31230.2",{"$nulls":6},"NH1","OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2, DLN5, OsDLN5","NPR1 HOMOLOG 1","NPR1-like 1, NPR1 homologue 1, nonexpresser of PR genes 1, Arabidopsis NPR1 homolog 1, non-expressor of pathogenesis-related gene 1, Arabidopsis NPR1 homologue 1, pathogenesis-related gene 2, nonexpressor of PR genes 1, Nonexpressor of Pathogenesis-Related Genes1, NONEXPRESSOR OF PATHOGENESIS-RELATED1 HOMOLOG1, NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1, non-expressor pathogenesis-related 1, DLN repressor 5, DLN motif protein 5",1," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009627 - systemic acquired resistance, GO:0009408 - response to heat, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0009682 - induced systemic resistance, GO:0006952 - defense response, GO:0048364 - root development, GO:0010942 - positive regulation of cell death, GO:0006950 - response to stress, GO:0031348 - negative regulation of defense response, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009625 - response to insect, GO:0016563 - transcription activator activity, GO:0009863 - salicylic acid mediated signaling pathway, GO:0002237 - response to molecule of bacterial origin, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0008219 - cell death, GO:0010112 - regulation of systemic acquired resistance, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0009734 - auxin mediated signaling pathway, GO:0009814 - defense response, incompatible interaction","TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000112 - disease resistance, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000445 - seed number, TO:0000181 - seed weight, TO:0000207 - plant height, TO:0000424 - brown planthopper resistance","PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os01g0194300","LOC_Os01g09800.1",null,"Os02g0701600","Os01g0574600",1.1469933,0]
[{"$nulls":24},"Os01g0715400","Os12g0118200","Os12g0118200",1.1993026,0,null,"Os05g0386700",3.3043206,"Os01g0574400",-1.1571645,{"$nulls":29},"ACS2","OsACS2, Os-ACS2","ACC SYNTHASE 2","ACC synthase 2, 1-aminocyclopropane-1-carboxylic acid synthase 2",4," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009612 - response to mechanical stimulus, GO:0009814 - defense response, incompatible interaction, GO:0046687 - response to chromate, GO:0046689 - response to mercury ion, GO:0009693 - ethylene biosynthetic process, GO:0002213 - defense response to insect, GO:0009734 - auxin mediated signaling pathway, GO:0042594 - response to starvation, GO:0009723 - response to ethylene stimulus, GO:0010446 - response to alkalinity, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0050832 - defense response to fungus, GO:0008631 - induction of apoptosis by oxidative stress, GO:0009611 - response to wounding, GO:0009733 - response to auxin stimulus","TO:0000148 - viral disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000481 - alkali sensitivity, TO:0000227 - root length, TO:0000034 - chromium sensitivity, TO:0000074 - blast disease, TO:0001012 - lateral root length, TO:0000163 - auxin sensitivity, TO:0000576 - stem length, TO:0000386 - rice ragged stunt virus resistance","PO:0009005 - root , PO:0009006 - shoot system ","Os04g0578000","LOC_Os04g48850.1",{"$nulls":7},"CHX4","OsSTA291, OsCHX04, CHX04, OsCHX4","CATION/H+ EXCHANGER  4","cation/H+ exchanger  4",12," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0015299 - solute:hydrogen antiporter activity",null,"PO:0009066 - anther ","Os12g0640500","LOC_Os12g44300.1",{"$nulls":6},"_",null,"_","MYB domain protein",2," Seed,  Other","GO:0003682 - chromatin binding, GO:0003677 - DNA binding","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os02g0271900","LOC_Os02g17190.1",{"$nulls":6},"HSP18.0","OsHSP18.0-CI, HSP18.0-CI, OsHsp18.0, OsHSP18.0, Oshsp18.0, OsSHSP1, SHSP1, OsMSR3, MSR3, OsHSP20, HSP20, OsHSP18.6, HSP18.6","18.0-KD CLASS I HEAT SHOCK PROTEIN","18.0 kDa class I heat shock protein, 18.0 kDa heat shock protein, 18.0-kD class I heat shock protein, multiple stress responsive gene 3, small heat shock protein 20",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0046688 - response to copper ion, GO:0005737 - cytoplasm, GO:0046685 - response to arsenic, GO:0046686 - response to cadmium ion, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010038 - response to metal ion, GO:0032025 - response to cobalt ion, GO:0010288 - response to lead ion, GO:0010045 - response to nickel ion, GO:0009615 - response to virus, GO:0045471 - response to ethanol, GO:0042542 - response to hydrogen peroxide, GO:0009408 - response to heat","TO:0000615 - abscisic acid sensitivity, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000203 - bacterial leaf streak disease resistance, TO:0000496 - carotenoid content, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0002667 - abscisic acid content, TO:0000227 - root length, TO:0000080 - micronutrient sensitivity, TO:0000016 - cobalt sensitivity, TO:0000021 - copper sensitivity, TO:0000148 - viral disease resistance, TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000413 - rice tungro virus resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance",null,"Os03g0267000","LOC_Os03g16030.1",null,"Os02g0775100","Os02g0559400",1.1460248,0]
[{"$nulls":24},"Os05g0500400","Os11g0687200","Os11g0687200",1.1889133,0,null,"Os06g0287700",3.3012493,"Os02g0207100",-1.156537,{"$nulls":29},"DGL1","DGL1","DWARF AND GLADIUS LEAF 1",null,null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"UBC8","OsUBC8","UBIQUITIN-CONJUGATING ENZYME 8","Ubiquitin-conjugating enzyme 8",5," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016874 - ligase activity, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009046 - flower ","Os05g0182500","LOC_Os05g08960.1, LOC_Os05g08960.2",{"$nulls":6},"_",null,"_","homeodomain protein",2," Seed,  Other","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009733 - response to auxin stimulus, GO:0043565 - sequence-specific DNA binding","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os02g0147800","LOC_Os02g05450.1",{"$nulls":6},"TPS19","OsTPS19","TERPENE SYNTHASE 19","terpene synthase 19",4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0000287 - magnesium ion binding, GO:0010333 - terpene synthase activity, GO:0009536 - plastid, GO:0051762 - sesquiterpene biosynthetic process, GO:0010334 - sesquiterpene synthase activity, GO:0043693 - monoterpene biosynthetic process, GO:0050832 - defense response to fungus, GO:0046250 - limonene biosynthetic process","TO:0000074 - blast disease",null,"Os04g0340300","LOC_Os04g27190.1, LOC_Os04g27190.2, LOC_Os04g27190.3",null,"Os11g0183700","Os10g0147400",1.1443429,0]
[{"$nulls":24},"Os04g0474800","Os03g0659700","Os03g0659700",1.1353956,0,null,"Os06g0554600",3.2950885,"Os05g0346200",-1.1557907,{"$nulls":29},"SPL7","OsSPL7","RICE SQUAMOSA PROMOTER-BINDING-LIKE 7","Squamosa promoter-binding-like protein 7",4," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0006350 - transcription","TO:0000329 - tillering ability, TO:0000050 - inflorescence branching, TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000371 - yield trait",null,"Os04g0551500","LOC_Os04g46580.1",{"$nulls":7},"UBC23","OsUBC23","UBIQUITIN-CONJUGATING ENZYME 23","Ubiquitin-conjugating enzyme 23",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042023 - DNA endoreduplication, GO:0051510 - regulation of unidimensional cell growth, GO:0080129 - proteasome core complex assembly, GO:0051788 - response to misfolded protein, GO:0006301 - postreplication repair, GO:0006635 - fatty acid beta-oxidation, GO:0009407 - toxin catabolic process, GO:0010286 - heat acclimation, GO:0016874 - ligase activity, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process",null,"PO:0009046 - flower , PO:0009049 - inflorescence ","Os01g0819400","LOC_Os01g60360.1",{"$nulls":6},"_","OsFbox304, Os_F0494","_","F-box protein 304",6," Seed,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0010608 - posttranscriptional regulation of gene expression, GO:0010629 - negative regulation of gene expression","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os06g0219700","LOC_Os06g11630.1",{"$nulls":6},"DREB1A","OsDREB1A, Os DREB1A, CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24, OsERF024, OsERF#024, AP2/EREBP#114, AP2/EREBP114, OsDREBL","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A","Dehydration-responsive element-binding protein 1A, Protein DREB1A, Protein C-repeat-binding factor 3, ethylene response factor 24, APETALA2/ethylene-responsive element binding protein 114",9," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0009408 - response to heat, GO:0009845 - seed germination, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009409 - response to cold, GO:0009611 - response to wounding, GO:0009651 - response to salt stress, GO:0009609 - response to symbiotic bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0006950 - response to stress, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus","TO:0000164 - stress trait, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance","PO:0007022 - seed imbibition stage ","Os09g0522200","LOC_Os09g35030.1",null,"Os03g0437600","Os05g0517200",1.1328201,0]
[{"$nulls":24},"Os03g0221700","Os02g0618200","Os02g0618200",1.116649,0,null,"Os07g0282300",3.2917912,"Os04g0470500",-1.1549082,{"$nulls":29},"CYP99A3","OsCYP99A3","P-450 99A3","Cytochrome P450 99A3",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004497 - monooxygenase activity, GO:0022900 - electron transport chain, GO:0009409 - response to cold, GO:0009411 - response to UV, GO:0009725 - response to hormone stimulus, GO:0016021 - integral to membrane, GO:0009055 - electron carrier activity, GO:0006952 - defense response, GO:0016020 - membrane, GO:0020037 - heme binding, GO:0055114 - oxidation reduction, GO:0051502 - diterpene phytoalexin biosynthetic process, GO:0009536 - plastid","TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000160 - UV light sensitivity, TO:0000207 - plant height, TO:0002675 - gibberellic acid content, TO:0002669 - diterpenoid phytoalexin content",null,"Os04g0178400","LOC_Os04g09920.1",{"$nulls":7},"_","OsHUB1, HUB1, SIP20","_","HISTONE MONOUBIQUITINATION1, HISTONE MONOUBIQUITINATION 1, SKIP interacting protein 20, SKIPa-interacting protein 20, SKIPa-interacting protein 20",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048653 - anther development, GO:0048573 - photoperiodism, flowering, GO:0010413 - glucuronoxylan metabolic process, GO:0033523 - histone H2B ubiquitination, GO:0016571 - histone methylation, GO:0010390 - histone monoubiquitination, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0009965 - leaf morphogenesis, GO:0019915 - lipid storage, GO:0010074 - maintenance of meristem identity, GO:0000278 - mitotic cell cycle, GO:0006406 - mRNA export from nucleus, GO:0000956 - nuclear-transcribed mRNA catabolic process, GO:0009640 - photomorphogenesis, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010072 - primary shoot apical meristem specification, GO:0016926 - protein desumoylation, GO:0016579 - protein deubiquitination, GO:0003002 - regionalization, GO:0009909 - regulation of flower development, GO:0010389 - regulation of G2/M transition of mitotic cell cycle, GO:0050826 - response to freezing, GO:0006396 - RNA processing, GO:0010162 - seed dormancy, GO:0009845 - seed germination, GO:0007062 - sister chromatid cohesion, GO:0010182 - sugar mediated signaling, GO:0010090 - trichome morphogenesis, GO:0010228 - vegetative to reproductive phase transition, GO:0045492 - xylan biosynthetic process, GO:0016874 - ligase activity, GO:0005739 - mitochondrion, GO:0005634 - nucleus, GO:0004842 - ubiquitin-protein ligase activity, GO:0008270 - zinc ion binding, GO:0045010 - actin nucleation, GO:0007155 - cell adhesion, GO:0051301 - cell division, GO:0016049 - cell growth, GO:0048825 - cotyledon development, GO:0010388 - cullin deneddylation, GO:0009817 - defense response to fungus, incompatible interaction, GO:0048589 - developmental growth, GO:0009880 - embryonic pattern specification, GO:0048449 - floral organ formation, GO:0009555 - pollen development, GO:0009556 - microsporogenesis","TO:0000180 - spikelet fertility, TO:0000137 - days to heading, TO:0000207 - plant height","PO:0001007 - pollen development stage , PO:0001004 - anther development stage ","Os04g0550400 ","LOC_Os04g46450.1",{"$nulls":6},"_",null,"_","BSD domain protein",3," Seed,  Other",null,"TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os03g0729900","LOC_Os03g52000.1",{"$nulls":6},"DREB2A","OsDREB2A, OsDREB2a, ERF40, OsERF#040, OsERF040, OsERF40, AP2/EREBP#167, AP2/EREBP167","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A","Dehydration-responsive element-binding protein 2A, Protein DREB2A, ethylene response factor 40, APETALA2/ethylene-responsive element binding protein 167",1," Tolerance and resistance - Stress tolerance,  Other","GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006950 - response to stress, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009635 - response to herbicide","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000058 - herbicide sensitivity, TO:0000259 - heat tolerance",null,"Os01g0165000","LOC_Os01g07120.2, LOC_Os01g07120.1",null,"Os03g0319000","Os07g0685700",1.1321497,0]
[{"$nulls":24},"Os08g0483200","Os04g0604300","Os04g0604300",1.0879035,0,null,"Os10g0577400",3.2913024,"Os03g0331900",-1.1543627,{"$nulls":29},"DX","Dx","DWARF 986083D",null,null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"HUB2","OsHUB2, FRRP1, DLN241, OsDLN241","HISTONE MONOUBIQUITINATION 2","HISTONE MONOUBIQUITINATION2, Flowering-Related RING Protein 1, DLN repressor 241, DLN motif protein 241",10," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048653 - anther development, GO:0010228 - vegetative to reproductive phase transition, GO:0010390 - histone monoubiquitination, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0004842 - ubiquitin-protein ligase activity, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0043687 - post-translational protein modification, GO:0033523 - histone H2B ubiquitination, GO:0016874 - ligase activity, GO:0005634 - nucleus, GO:0007346 - regulation of mitotic cell cycle, GO:0008270 - zinc ion binding, GO:0009555 - pollen development, GO:0009556 - microsporogenesis, GO:0009965 - leaf morphogenesis, GO:0010162 - seed dormancy","TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000180 - spikelet fertility","PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os10g0565600 ","LOC_Os10g41590.1, LOC_Os10g41590.2",{"$nulls":6},"_",null,"_","clathrin assenbly Enth domain protein",4," Seed","GO:0006623 - protein targeting to vacuole, GO:0009579 - thylakoid, GO:0005884 - actin filament","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os04g0599900","LOC_Os04g51120.1, LOC_Os04g51120.3",{"$nulls":6},"P5CS","OsP5CS, P5CS1, OsP5CS1, OsALDH18B1, ALDH18B1, OsP5CS-1, P5CS-1","P5C SYNTHETASE","delta1-pyrroline-5-carboxylate synthetase, Delta-1-pyrroline-5-carboxylate synthetase, pyrroline-5-carboxylate synthetase, proline carboxylate synthase 1, Aldehyde dehydrogenase 18B1",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity, GO:0009651 - response to salt stress, GO:0004349 - glutamate 5-kinase activity, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0006561 - proline biosynthetic process, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0055114 - oxidation reduction, GO:0009414 - response to water deprivation","TO:0000507 - osmotic adjustment capacity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006002 - proline content, TO:0000259 - heat tolerance",null,"Os05g0455500","LOC_Os05g38150.2, LOC_Os05g38150.1",null,"Os09g0570500","Os10g0556200",1.1279386,0]
[{"$nulls":24},"Os01g0866400","Os03g0802500","Os03g0802500",1.0286683,0,null,"Os01g0686700",3.2910855,"Os05g0511300",-1.1540952,{"$nulls":29},"LA1","OsLa1","LAZY 1","OsLazy1, LAZY1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0010031 - circumnutation, GO:0009926 - auxin polar transport, GO:0009734 - auxin mediated signaling pathway, GO:0009630 - gravitropism, GO:0009629 - response to gravity","TO:0000567 - tiller angle, TO:0002693 - gravity response trait, TO:0000207 - plant height",null,"Os11g0490600","LOC_Os11g29840.1",{"$nulls":7},"ES1","TUT1, OsSCAR1, SCAR1, TUT1/OsSCAR1, OsSCAR2, SCAR2","EARLY SENESCENCE 1","early senescence 1, SCAR-like protein 2, suppressor of cAMP receptor 1, TUTOU1",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010150 - leaf senescence, GO:0010229 - inflorescence development, GO:0030036 - actin cytoskeleton organization, GO:0009555 - pollen development, GO:0009414 - response to water deprivation, GO:0005856 - cytoskeleton, GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0048653 - anther development, GO:0009737 - response to abscisic acid stimulus, GO:0010118 - stomatal movement, GO:0010148 - transpiration","TO:0000621 - inflorescence development trait, TO:0000566 - stomatal frequency, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000421 - pollen fertility, TO:0000391 - seed size, TO:0000218 - pollen abortion type, TO:0000203 - bacterial leaf streak disease resistance, TO:0000068 - lodging incidence, TO:0000051 - stem strength, TO:0000145 - internode length, TO:0000249 - leaf senescence, TO:0000522 - stomatal conductance, TO:0001018 - transpiration rate","PO:0001083 - inflorescence development stage , PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os01g0208600","LOC_Os01g11040.1",{"$nulls":6},"_",null,"_","VHS domain protein",1," Seed","GO:0016020 - membrane, GO:0006886 - intracellular protein transport","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os01g0232400","LOC_Os01g13160.1",{"$nulls":6},"_","SNAC1, snac1, OsNAC9, ONAC002, ONAC2, ONAC033, ONAC33, ONAC043, ONAC43, ONAC044, ONAC44, OsNAC19, NAC19, SNAC1/ONAC002, OsSNAC1","_","SNAC1: stress-responsive NAC1, stress-responsive NAC 1, stress-induced transcription factor NAC1, NAC domain protein 9, NAC domain-containing protein 2, NAC domain-containing protein 33, NAC domain-containing protein 43, NAC domain-containing protein 44",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0042538 - hyperosmotic salinity response, GO:0009651 - response to salt stress, GO:0034059 - response to anoxia","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000524 - submergence tolerance, TO:0000656 - root development trait, TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance",null,"Os03g0815100","LOC_Os03g60080.1",null,"Os03g0424500","Os03g0128700",1.119038,0]
[{"$nulls":24},"Os03g0239000","Os02g0707900","Os02g0707900",1.0202408,0,null,"Os03g0265400",3.2905226,"Os05g0580600",-1.1535168,{"$nulls":29},"CCA1","OsCCA1, OsLHY, LHY, LHY-like_chr.8, COC1, DLN203, OsDLN203, LEM1, OsLEM1, Nhd1, OsNhd1","CIRCADIAN CLOCK ASSOCIATED 1","LATE ELONGATED HYPOCOTYL, DLN repressor 203, DLN motif protein 203, lvp1 enhancer mutant 1, N-mediated heading date1",8," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Heterochrony,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010228 - vegetative to reproductive phase transition, GO:0009743 - response to carbohydrate stimulus, GO:0050832 - defense response to fungus, GO:0007623 - circadian rhythm, GO:0042752 - regulation of circadian rhythm, GO:0006355 - regulation of transcription, DNA-dependent, GO:0019740 - nitrogen utilization, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009730 - detection of carbohydrate stimulus, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002639 - shoot branching, TO:0000329 - tillering ability, TO:0000371 - yield trait, TO:0002616 - flowering time, TO:0000346 - tiller number","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0000055 - bud , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0025034 - leaf ","Os08g0157600","LOC_Os08g06110.2, LOC_Os08g06110.5, LOC_Os08g06110.4, LOC_Os08g06110.3",{"$nulls":7},"ROPGEF5","OsRacGEF1, RacGEF1, OsRopGEF5, Os RopGEF5, RopGEF5, OsRopGEF7B, RopGEF7B","ROP-SPECIFIC GUANINE NUCLEOTIDE EXCHANGE FACTOR 5","small GTPase Rac/ROP guanine nucleotide exchange factor 1, GEF for ROP 5, guanine nucleotide exchange factor for Rop 5, Rop-specific GEF5, Rop-specific guanine nucleotide exchange factor 5, Guanine Nucleotide Exchange Factor 7B",1," Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005886 - plasma membrane, GO:0005089 - Rho guanyl-nucleotide exchange factor activity, GO:0048437 - floral organ development, GO:0006952 - defense response, GO:0005783 - endoplasmic reticulum","TO:0000225 - stamen number, TO:0000650 - lemma length, TO:0000112 - disease resistance, TO:0006009 - lodicule anatomy and morphology trait, TO:0006038 - floral organ number, TO:0000180 - spikelet fertility","PO:0000229 - flower meristem , PO:0009067 - filament , PO:0009066 - anther , PO:0020138 - leaf lamina vein , PO:0020121 - lateral root , PO:0005029 - root primordium , PO:0000025 - root tip , PO:0009073 - stigma , PO:0009005 - root , PO:0025477 - floral organ primordium , PO:0025281 - pollen ","Os01g0849100","LOC_Os01g62990.1",{"$nulls":6},"_",null,"_","VHS and GAT domain protein",1," Seed","GO:0006886 - intracellular protein transport, GO:0005886 - plasma membrane, GO:0005622 - intracellular","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os01g0825700","LOC_Os01g61030.1",{"$nulls":6},"APX2","OsAPX2, OsAPx02, APXb, OsAPx2, OSAPX2, APx2, cAPX, OsAPX1, APX1","L-ASCORBATE PEROXIDASE 2","\\L-ascorbate peroxidase 2, cytosolic\\\", ascorbate peroxidase 2, ascorbate peroxidase b\"",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0020037 - heme binding, GO:0030955 - potassium ion binding, GO:0042744 - hydrogen peroxide catabolic process, GO:0005509 - calcium ion binding, GO:0016688 - L-ascorbate peroxidase activity, GO:0010332 - response to gamma radiation, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0042742 - defense response to bacterium, GO:0055114 - oxidation reduction, GO:0046688 - response to copper ion, GO:0009845 - seed germination, GO:0009738 - abscisic acid mediated signaling, GO:0004601 - peroxidase activity, GO:0005737 - cytoplasm, GO:0006801 - superoxide metabolic process, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling","TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000021 - copper sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000259 - heat tolerance","PO:0007057 - 0 seed germination stage ","Os07g0694700","LOC_Os07g49400.1, LOC_Os07g49400.4, LOC_Os07g49400.3, LOC_Os07g49400.2",null,"Os02g0274900","Os01g0719100",1.119002,0]
[{"$nulls":24},"Os01g0329900","Os06g0716100","Os06g0716100",0.98085946,0,null,"Os12g0511200",3.2899492,"Os04g0372700",-1.1529967,{"$nulls":29},"LOL2","OsLOL2, OsLSD5, OsLOL5, LOL5","LSD1-LIKE ZINC FINGER PROTEIN","LSD1-like 2, lsd one like 2, LSD1-like-5",1," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0033194 - response to hydroperoxide, GO:0005634 - nucleus, GO:0031349 - positive regulation of defense response, GO:0006979 - response to oxidative stress, GO:0031341 - regulation of cell killing, GO:0010446 - response to alkalinity, GO:0009651 - response to salt stress, GO:0009686 - gibberellin biosynthetic process, GO:0006952 - defense response, GO:0045927 - positive regulation of growth, GO:0042742 - defense response to bacterium, GO:0010372 - positive regulation of gibberellin biosynthetic process","TO:0000652 - leaf necrosis, TO:0002657 - oxidative stress, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0002675 - gibberellic acid content, TO:0006001 - salt tolerance",null,"Os01g0612700","LOC_Os01g42710.1",{"$nulls":7},"GDPD","OsGdpD, GdpD","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE","Glycerophosphoryl diester phosphodiesterase",12," Vegetative organ - Root,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008889 - glycerophosphodiester phosphodiesterase activity, GO:0006629 - lipid metabolic process, GO:0048767 - root hair elongation, GO:0048653 - anther development","TO:0002665 - root hair length, TO:0000531 - anther length",null,"Os12g0456700","LOC_Os12g27102.1, LOC_Os12g27102.2, LOC_Os12g27102.3",{"$nulls":6},"_",null,"_","Pbi and ZZ domain DBP protein",2," Seed","GO:0008270 - zinc ion binding","TO:0000620 - embryo development trait, TO:0000653 - seed development trait",null,"Os02g0593700","LOC_Os02g38050.6, LOC_Os02g38050.5, LOC_Os02g38050.4, LOC_Os02g38050.3, LOC_Os02g38050.1, LOC_Os02g38050.2",{"$nulls":6},"CATB","CatB, CAT-B, OsCatB, OsCATB, OsCAT1B, CAT1B, CAT2, OsCAT2","CATALASE B","Catalase B, Catalase isozyme B",6," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0050777 - negative regulation of immune response, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009514 - glyoxysome, GO:0020037 - heme binding, GO:0042744 - hydrogen peroxide catabolic process, GO:0055114 - oxidation reduction, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0009751 - response to salicylic acid stimulus, GO:0004096 - catalase activity, GO:0005829 - cytosol, GO:0005777 - peroxisome, GO:0050832 - defense response to fungus","TO:0000605 - hydrogen peroxide content, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000421 - pollen fertility, TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress","PO:0009066 - anther , PO:0025034 - leaf ","Os06g0727200","LOC_Os06g51150.2, LOC_Os06g51150.1",null,"Os02g0320100","Os01g0593200",1.1106135,0]
[{"$nulls":24},"Os04g0613700","Os05g0445100","Os05g0445100",0.96103925,0,null,"Os01g0662700",3.289377,"Os01g0547600",-1.1524473,{"$nulls":29},"TOC1","OsTOC1, OsPRR1, Os-PRR1, PRR1, OsRRA21, OsCCT07","TIMING OF CAB EXPRESSION 1","Two-component response regulator-like PRR1, Pseudo-response regulator 1, A-type RR 21, CCT domain-containing gene 7, CCT (CO, CO-LIKE and TOC1) domain protein 7, CCT domain protein 7",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Heterochrony","GO:0000156 - two-component response regulator activity, GO:0048511 - rhythmic process, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0042752 - regulation of circadian rhythm, GO:0007623 - circadian rhythm, GO:0000160 - two-component signal transduction system (phosphorelay)","TO:0000346 - tiller number, TO:0000329 - tillering ability","PO:0000055 - bud , PO:0009010 - seed , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0009006 - shoot system , PO:0025034 - leaf ","Os02g0618200","LOC_Os02g40510.1",{"$nulls":7},"_","OsATL16, OsSTA21","_","amino acid transporter-like 16",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane",null,"PO:0009066 - anther ","Os01g0597400","LOC_Os01g41400.1",{"$nulls":6},"_",null,"_","Pbi and ZZ domain DBP protein",4," Seed","GO:0008270 - zinc ion binding","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os04g0476800","LOC_Os04g40090.1",{"$nulls":6},"LEA3-1","OsLEA3-1, OsLea3-1, LEA3, OsLEA3, OsLEA19, OsLEA19a, LEA19, OsLEA19b, OsLEA3, Oslea3, oslea3, OsLEA3A, LEA3A","LATE EMBRYOGENESIS ABUNDANT 3-1","Late embryogenesis abundant protein 3, late embryogenesis abundant protein 19, Group 3 LEA (type I) protein",5," Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009738 - abscisic acid mediated signaling, GO:0009411 - response to UV, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000303 - cold tolerance, TO:0000507 - osmotic adjustment capacity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance, TO:0000160 - UV light sensitivity",null,"Os05g0542500 ","LOC_Os05g46480.4, LOC_Os05g46480.3, LOC_Os05g46480.1, LOC_Os05g46480.2",null,"Os01g0710000","Os03g0305800",1.1089252,0]
[{"$nulls":24},"Os01g0227100","Os05g0537700","Os05g0537700",-0.9538104,0,null,"Os07g0673400",3.278506,"Os09g0407200",-1.1518512,{"$nulls":29},"BC12","bc12, gdd, GDD1, BC12/GDD1, OsGDD1, OsBC12/GDD1, OsBC12","BRITTLE CULM 12","Gibberellin-deficient dwarf 1, gibberellin-deficient dwarf1, kinesin-4 protein BRITTLE CULM12, kinesin-like protein BRITTLE CULM12, OsKinesin-4",9," Vegetative organ - Culm","GO:0005524 - ATP binding, GO:0007018 - microtubule-based movement, GO:0005856 - cytoskeleton, GO:0006351 - transcription, DNA-dependent, GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0040008 - regulation of growth, GO:0042127 - regulation of cell proliferation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009832 - plant-type cell wall biogenesis, GO:0008574 - plus-end-directed microtubule motor activity, GO:0008017 - microtubule binding, GO:0043565 - sequence-specific DNA binding, GO:0007049 - cell cycle, GO:0005871 - kinesin complex, GO:0005874 - microtubule, GO:0010215 - cellulose microfibril organization, GO:0003777 - microtubule motor activity",null,null,"Os09g0114500","LOC_Os09g02650.1",{"$nulls":7},"_","OsATL17, OsSTA19","_","amino acid transporter-like 17",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane",null,"PO:0009066 - anther ","Os01g0586500","LOC_Os01g40410.1",{"$nulls":6},"_",null,"_","DNA J domain protein",3," Seed",null,"TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os03g0111500","LOC_Os03g02080.1, LOC_Os03g02080.2",{"$nulls":6},"CATA","CATA1, Cat A1*, OSCAT-A, Cat2, CatA1, CAT-A, OsCatA, OsCAT, CAT, catA, OSCATA, OsCATc, OsCATA, OsCAT1A, CAT1, OsCATC, OsCAT2","CATALASE A","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009725 - response to hormone stimulus, GO:0010029 - regulation of seed germination, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009751 - response to salicylic acid stimulus, GO:0009408 - response to heat, GO:0010332 - response to gamma radiation, GO:0009409 - response to cold, GO:0009514 - glyoxysome, GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0004096 - catalase activity, GO:0042744 - hydrogen peroxide catabolic process, GO:0055114 - oxidation reduction, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0005777 - peroxisome, GO:0006801 - superoxide metabolic process","TO:0000031 - silicon sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000401 - plant growth hormone sensitivity","PO:0009047 - stem , PO:0009066 - anther , PO:0025034 - leaf , PO:0009010 - seed ","Os02g0115700","LOC_Os02g02400.1, LOC_Os02g02400.3, LOC_Os02g02400.2",null,"Os11g0484000","Os01g0602800",1.1086435,0]
[{"$nulls":24},"Os01g0589800","Os01g0916600","Os01g0916600",-0.9567382,0,null,"Os01g0907200",3.2784176,"Os01g0120800",-1.1516262,{"$nulls":29},"DWARF4","OsDWARF4, osdwarf4, OsDWF4, DWF4, CYP90B2, OsCYP90B2, D4, OsD4","DWARF4","brassinosteroid C-22 hydroxylase, Cytochrome P450 90B2",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0016125 - sterol metabolic process, GO:0016132 - brassinosteroid biosynthetic process, GO:0016021 - integral to membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0010358 - leaf shaping, GO:0010268 - brassinosteroid homeostasis, GO:0048366 - leaf development, GO:0020037 - heme binding, GO:0010012 - steroid 22-alpha hydroxylase activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009826 - unidimensional cell growth, GO:0009741 - response to brassinosteroid stimulus, GO:0007275 - multicellular organismal development",null,null,"Os03g0227700","LOC_Os03g12660.1",{"$nulls":7},"_","OsPP13, PPP6","_","Protein phosphatase 13, Serine/threonine-protein phosphatase 6",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0048653 - anther development, GO:0004721 - phosphoprotein phosphatase activity",null,"PO:0001004 - anther development stage ","Os01g0691700","LOC_Os01g49690.1",{"$nulls":6},"_",null,"_","RING-finger protein",7," Seed",null,"TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os07g0461600","LOC_Os07g27760.1, LOC_Os07g27760.2, LOC_Os07g27760.3, LOC_Os07g27760.4",{"$nulls":6},"_","SOD, OsSOD-Cu/Zn, SOD-Cu/Zn, OsaCCS, OsCCS, CCS","_","superoxide dismutase",4," Biochemical character,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0005737 - cytoplasm, GO:0009570 - chloroplast stroma, GO:0016532 - superoxide dismutase copper chaperone activity, GO:0008270 - zinc ion binding, GO:0006878 - cellular copper ion homeostasis, GO:0030001 - metal ion transport, GO:0006801 - superoxide metabolic process, GO:0043085 - positive regulation of catalytic activity, GO:0055114 - oxidation reduction, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0002213 - defense response to insect","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000424 - brown planthopper resistance, TO:0000259 - heat tolerance",null,"Os04g0573200 ","LOC_Os04g48410.2, LOC_Os04g48410.1",null,"Os11g0169900","Os07g0545800",1.1034154,0]
[{"$nulls":24},"Os02g0101500","Os04g0663300","Os04g0663300",-0.96621513,0,null,"Os04g0511400",3.2760212,"Os07g0564150",-1.1510543,{"$nulls":29},"CPD1","OsCPD1, CYP90A3, CYP90A3/OsCPD1, CPD","CPD1","brassinosteroid C-23 hydrozylase, CONSTITUTIVE PHOTOMORPHOGENESIS and DWARFISM 1, Cytochrome P450 90A3",11," Vegetative organ - Culm","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0020037 - heme binding, GO:0009637 - response to blue light, GO:0016132 - brassinosteroid biosynthetic process","TO:0000159 - blue light sensitivity, TO:0002676 - brassinosteroid content",null,"Os11g0143200","LOC_Os11g04710.1",{"$nulls":7},"DRUS1","OsCrRLK1L8, CrRLK1L8, FLR1, OsFLR1, OsMRLK11, MRLK11","DWARF AND RUNTISH SPIKELET1","Catharanthus roseus receptor-like kinase1-like kinase 8, FERONIA-Like Receptor kinase 1, DWARF AND RUNTISH SPIKELET 1, malectin/malectin-like receptor-like kinase 11",3," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005886 - plasma membrane, GO:0005618 - cell wall, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0043610 - regulation of carbohydrate utilization, GO:0019252 - starch biosynthetic process, GO:0010229 - inflorescence development, GO:0048653 - anther development, GO:0016020 - membrane","TO:0000696 - starch content, TO:0000180 - spikelet fertility, TO:0000531 - anther length, TO:0000366 - reproductive growth time, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000392 - sterility or fertility trait, TO:0006036 - stem elongation, TO:0000621 - inflorescence development trait, TO:0000564 - spikelet width, TO:0000657 - spikelet anatomy and morphology trait, TO:0000547 - primary branch number, TO:0000187 - anther color","PO:0001004 - anther development stage , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os03g0333200","LOC_Os03g21540.1",{"$nulls":6},"_",null,"_","calcium-binding repeat protein",1," Seed","GO:0008060 - ARF GTPase activator activity, GO:0008270 - zinc ion binding, GO:0032312 - regulation of ARF GTPase activity","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os01g0813900","LOC_Os01g59850.1",{"$nulls":6},"OR","Osor","ORANGE","Orange",2," Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0042542 - response to hydrogen peroxide, GO:0009408 - response to heat, GO:0016117 - carotenoid biosynthetic process, GO:0016021 - integral to membrane, GO:0005634 - nucleus, GO:0009507 - chloroplast, GO:0050821 - protein stabilization","TO:0002695 - beta-carotene content, TO:0000259 - heat tolerance, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity","PO:0005052 - plant callus , PO:0009005 - root , PO:0009047 - stem , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009010 - seed ","Os02g0651300","LOC_Os02g43500.1",null,"Os01g0948400","Os01g0674500",1.0944561,0]
[{"$nulls":24},"Os02g0744200","Os12g0141500","Os12g0141500",-0.973207,0,null,"Os09g0441900",3.2746305,"Os05g0546500",-1.1504806,{"$nulls":29},"DWARF4L","OsDWARF4L","DWARF4-LIKE",null,4," Vegetative organ - Culm",{"$nulls":12},"RLCK342","OsRLCK342, OsSTA269","RECEPTOR-LIKE CYTOPLASMIC KINASE 342","Receptor-like Cytoplasmic Kinase 342",11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0644000","LOC_Os11g42440.1",{"$nulls":6},"_",null,"_","calcium-binding repeat protein",2," Seed","GO:0032312 - regulation of ARF GTPase activity, GO:0008270 - zinc ion binding, GO:0008060 - ARF GTPase activator activity","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os02g0208900","LOC_Os02g11820.1, LOC_Os02g11820.2, LOC_Os02g11820.3",{"$nulls":6},"BUI1","BUI1, FH5, FH5/BUI1, RMD, OsFH5, FH5/RMD","BENT UPPERMOST INTERNODE 1","BENT UPPERMOST INTERNODE1, class II formin FH5, Rice Morphology Determinant, formin homology 5, Type II Formin FH5, forming family protein 5, FH2 protein 5, FH2 domain protein 5, rice morphology determinant1-1",7," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0003779 - actin binding, GO:0004721 - phosphoprotein phosphatase activity, GO:0030036 - actin cytoskeleton organization, GO:0060627 - regulation of vesicle-mediated transport, GO:0001558 - regulation of cell growth, GO:0009733 - response to auxin stimulus, GO:0000902 - cell morphogenesis, GO:0009507 - chloroplast, GO:0009826 - unidimensional cell growth, GO:0030041 - actin filament polymerization, GO:0051017 - actin filament bundle formation, GO:0051016 - barbed-end actin filament capping, GO:0008017 - microtubule binding, GO:0001578 - microtubule bundle formation, GO:0051125 - regulation of actin nucleation, GO:0000226 - microtubule cytoskeleton organization, GO:0009941 - chloroplast envelope, GO:0009416 - response to light stimulus, GO:0032922 - circadian regulation of gene expression, GO:0009959 - negative gravitropism","TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000268 - inflorescence shape, TO:0000484 - seed shape, TO:0000262 - panicle shape, TO:0002756 - shoot habit, TO:0000075 - light sensitivity, TO:0000391 - seed size, TO:0000146 - seed length, TO:0000547 - primary branch number, TO:0000207 - plant height, TO:0002710 - root shape, TO:0000043 - root anatomy and morphology trait, TO:0002693 - gravity response trait","PO:0025034 - leaf , PO:0020132 - columella root cap cell ","Os07g0596300","LOC_Os07g40520.1, LOC_Os07g40510.1",null,"Os04g0583500","Os01g0837900",1.0942396,0]
[{"$nulls":24},"Os05g0190500","Os07g0249800","Os07g0249800",-0.97732526,0,null,"Os03g0772700",3.2689126,"Os10g0516500",-1.1469765,{"$nulls":29},"GA2OX5","OsGA2ox5, 2-ODD32, Os2-ODD32, 2ODD32, Os2ODD32","GIBBERELLIN 2-OXIDASE 5","GA 2-oxidase 5, 2-oxoglutarate-dependent dioxygenase 32",7," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009685 - gibberellin metabolic process","TO:0000207 - plant height, TO:0002675 - gibberellic acid content, TO:0006001 - salt tolerance, TO:0002693 - gravity response trait",null,"Os07g0103500","LOC_Os07g01340.1",{"$nulls":7},"PFT1","OsPFT1, OsMED25_1, MED25_1, OsMED25, MED25","PHYTOCHROME AND FLOWERING TIME 1","Mediator 25_1, mediator subunit 25",9," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010076 - maintenance of floral meristem identity, GO:0009737 - response to abscisic acid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009741 - response to brassinosteroid stimulus, GO:0010310 - regulation of hydrogen peroxide metabolic process, GO:0009908 - flower development, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus","TO:0000734 - grain length, TO:0000148 - viral disease resistance, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0020105 - ligule , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0007615 - flower development stage ","Os09g0306700","LOC_Os09g13610.3, LOC_Os09g13610.1",{"$nulls":6},"_",null,"_","RNA-binding domain protein",8," Seed","GO:0005730 - nucleolus, GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding","TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os08g0412200","LOC_Os08g31810.1, LOC_Os08g31810.2, LOC_Os08g31810.3",{"$nulls":6},"2ODD2","FLS, 2-ODD2, Os2-ODD2, Os2ODD2, OsF3H, F3H, F3H2, OsF3H2, OsF3H03g, F3H03g","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 2","flavonol synthase, 2-oxoglutarate-dependent dioxygenase 2, flavanone 3-hydroxylase",3," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0009863 - salicylic acid mediated signaling pathway, GO:0042742 - defense response to bacterium, GO:0009718 - anthocyanin biosynthetic process, GO:0009411 - response to UV, GO:0009617 - response to bacterium, GO:0009620 - response to fungus, GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0002213 - defense response to insect, GO:0051213 - dioxygenase activity, GO:0046872 - metal ion binding","TO:0000424 - brown planthopper resistance, TO:0000290 - flavonoid content, TO:0000160 - UV light sensitivity, TO:0000326 - leaf color, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance",null,"Os03g0122300","LOC_Os03g03034.5, LOC_Os03g03034.4, LOC_Os03g03034.3, LOC_Os03g03034.2, LOC_Os03g03034.1",null,"Os01g0686800","Os01g0332900",1.0935456,0]
[{"$nulls":24},"Os10g0461400","Os07g0626400","Os07g0626400",-0.99142647,0,null,"Os07g0156200",3.268673,"Os08g0566900",-1.1461121,{"$nulls":29},"GA2OX6","OsGA2ox6","GIBBERELLIN 2-OXIDASE 6","GA 2-oxidase 6",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009685 - gibberellin metabolic process","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0002675 - gibberellic acid content",null,"Os04g0522500","LOC_Os04g44150.1",{"$nulls":7},"_","PEP","_","PEPPER",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0003723 - RNA binding, GO:0009908 - flower development",null,"PO:0007615 - flower development stage ","Os10g0414700","LOC_Os10g27470.1",{"$nulls":6},"_",null,"_","Finger zinc testis metal-binding protein",1," Seed",null,"TO:0000653 - seed development trait, TO:0000620 - embryo development trait",null,"Os01g0663800","LOC_Os01g47430.1, LOC_Os01g47430.2",{"$nulls":6},"2ODD3","2-ODD3, Os2-ODD3, Os2ODD3, OsF3H04g, F3H04g","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 3","2-oxoglutarate-dependent dioxygenase 3",4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009863 - salicylic acid mediated signaling pathway, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0051213 - dioxygenase activity, GO:0046872 - metal ion binding","TO:0000203 - bacterial leaf streak disease resistance",null,"Os04g0581000","LOC_Os04g49194.1",null,"Os04g0520700","Os02g0777800",1.0892912,0]
[{"$nulls":24},"Os06g0662200","Os02g0114400","Os02g0114400",-1.0180774,0,null,"Os01g0293900",3.268673,"Os04g0692100",-1.1458529,{"$nulls":29},"GA2OX7","OsGA2ox7","GIBBERELLIN 2-OXIDASE 7","GA 2-oxidase 7",1," Biochemical character,  Vegetative organ - Culm","GO:0009685 - gibberellin metabolic process","TO:0002675 - gibberellic acid content, TO:0000207 - plant height",null,"Os01g0209700","LOC_Os01g11150.1",{"$nulls":7},"_","PG","_","POLYGALACTURONASE",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0009555 - pollen development, GO:0009908 - flower development",null,"PO:0007615 - flower development stage ","Os01g0172900","LOC_Os01g07790.1",{"$nulls":6},"XDH1","OsXDH1","XANTHINE DEHYDROGENASE 1","Xanthine dehydrogenase, xanthine dehydrogenase 1",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0042554 - superoxide anion generation, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046466 - membrane lipid catabolic process, GO:0050660 - FAD binding, GO:0009055 - electron carrier activity, GO:0009414 - response to water deprivation, GO:0046110 - xanthine metabolic process, GO:0005829 - cytosol, GO:0000302 - response to reactive oxygen species, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009416 - response to light stimulus, GO:0009408 - response to heat, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0004854 - xanthine dehydrogenase activity, GO:0005506 - iron ion binding","TO:0000371 - yield trait, TO:0000734 - grain length, TO:0000460 - light intensity sensitivity, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000605 - hydrogen peroxide content, TO:0000382 - 1000-seed weight, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000249 - leaf senescence, TO:0000432 - temperature response trait","PO:0009047 - stem , PO:0009005 - root , PO:0025034 - leaf ","Os03g0429800","LOC_Os03g31550.1, LOC_Os03g31550.2",{"$nulls":6},"NAC96","NAC94, ONAC096, ONAC96, NAC4, OsNAC4, OsNAC94","NAC DOMAIN-CONTAINING PROTEIN 96","NAC domain-containing protein 94, NAC domain-containing protein 096, NAC domain-containing protein 96",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0002237 - response to molecule of bacterial origin, GO:0010200 - response to chitin, GO:0002238 - response to molecule of fungal origin, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress, GO:0051607 - defense response to virus","TO:0006001 - salt tolerance, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000386 - rice ragged stunt virus resistance, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0138200","LOC_Os07g04560.1",null,"Os04g0574700","Os04g0604300",1.0879035,0]
[{"$nulls":24},"Os06g0145800","Os01g0231700","Os01g0231700",-1.0226378,0,null,"Os08g0443800",3.2659805,"Os03g0114900",-1.1456639,{"$nulls":29},"GA2OX8","OsGA2ox8","GIBBERELLIN 2-OXIDASE 8","gibberellin 2-beta-dioxygenase 8",5," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009845 - seed germination, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0016020 - membrane, GO:0048364 - root development, GO:0010336 - gibberellic acid homeostasis, GO:0045487 - gibberellin catabolic process, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009962 - regulation of flavonoid biosynthetic process, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0009685 - gibberellin metabolic process","TO:0000615 - abscisic acid sensitivity, TO:0000340 - total soluble sugar content, TO:0000163 - auxin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0002675 - gibberellic acid content, TO:0000227 - root length, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress, TO:0000166 - gibberellic acid sensitivity, TO:0000152 - panicle number, TO:0000656 - root development trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000576 - stem length","PO:0007520 - root development stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os05g0560900","LOC_Os05g48700.1",{"$nulls":7},"_","MOS3/SAR3, MOS3, SAR3, OsNucAP1, NUCAP1, OsNup96, Nup96","_","\\MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3\\\", \\\"MODIFIER OF SNC1, 3\\\", SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96\"",3," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009733 - response to auxin stimulus, GO:0000394 - RNA splicing, via endonucleolytic cleavage and ligation, GO:0009870 - defense response signaling pathway, resistance gene-dependent, GO:0009086 - methionine biosynthetic process, GO:0009908 - flower development, GO:0015288 - porin activity, GO:0031965 - nuclear membrane, GO:0009909 - regulation of flower development, GO:0010074 - maintenance of meristem identity, GO:0005643 - nuclear pore, GO:0006406 - mRNA export from nucleus, GO:0006606 - protein import into nucleus",null,"PO:0007615 - flower development stage ","Os03g0172000","LOC_Os03g07580.1",{"$nulls":6},"LHR","OsLHR","LONG HAIRPIN-STRUCTURE CONTAINING NON-CODING RNA","Long Hairpin-structure containing non-coding RNA",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016246 - RNA interference, GO:0006306 - DNA methylation","TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000135 - leaf length, TO:0000397 - grain size, TO:0000522 - stomatal conductance, TO:0000592 - 1000-dehulled grain weight, TO:0000370 - leaf width, TO:0000207 - plant height","PO:0009010 - seed , PO:0009005 - root ","Os12g0618400",{"$nulls":7},"YSL2","OsYSL2, Os-YSL2, OsYs6","YELLOW STRIP-LIKE GENE 2","rice YSL (yellow stripe-like) gene2, Metal-nicotianamine transporter YSL2, Protein YELLOW STRIPE LIKE 2, ferrous Fe- and Mn-NA transporter OsYSL2, yellow stripe 1-like transporter 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046873 - metal ion transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0006826 - iron ion transport, GO:0005381 - iron ion transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0055085 - transmembrane transport, GO:0010106 - cellular response to iron ion starvation, GO:0030001 - metal ion transport, GO:0010039 - response to iron ion, GO:0055072 - iron ion homeostasis, GO:0005506 - iron ion binding, GO:0009739 - response to gibberellin stimulus, GO:0016020 - membrane","TO:0000224 - iron sensitivity, TO:0000166 - gibberellic acid sensitivity","PO:0000071 - companion cell , PO:0005020 - vascular bundle , PO:0005417 - phloem , PO:0009072 - plant ovary , PO:0009051 - spikelet , PO:0009009 - plant embryo ","Os02g0649900","LOC_Os02g43370.2, LOC_Os02g43370.1",null,"Os02g0579600","Os07g0683900",1.0783744,0]
[{"$nulls":24},"Os06g0695500","Os05g0199500","Os05g0199500",-1.0347252,0,null,"Os02g0740900",3.2602508,"Os11g0148600",-1.144214,{"$nulls":29},"GA2OX9","OsGA2ox9, GA2ox7, 2-ODD35, Os2-ODD35, 2ODD35, Os2ODD35","GIBBERELLIN 2-OXIDASE 9","GA 2-oxidase 9, 2-oxoglutarate-dependent dioxygenase 35",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009685 - gibberellin metabolic process, GO:0006970 - response to osmotic stress, GO:0046687 - response to chromate, GO:0046689 - response to mercury ion","TO:0000034 - chromium sensitivity, TO:0000276 - drought tolerance, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0006001 - salt tolerance",null,"Os02g0630300","LOC_Os02g41954.2, LOC_Os02g41954.1",{"$nulls":7},"_","LHY, LHY-like_chr.4, OsMYBR1, MYBR1, OsMYB1R35, MYB1R35","_","LATE ELONGATED HYPOCOTYL, MYB-related transcription factor 1",4," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009409 - response to cold, GO:0009908 - flower development, GO:0009648 - photoperiodism, GO:0003682 - chromatin binding, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0007623 - circadian rhythm","TO:0000303 - cold tolerance, TO:0006002 - proline content, TO:0000340 - total soluble sugar content, TO:0000276 - drought tolerance","PO:0007615 - flower development stage ","Os04g0583900","LOC_Os04g49450.1, LOC_Os04g49450.2",{"$nulls":6},"MYB4P","OsMYB4P","_",null,11," Seed - Physiological traits,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0010229 - inflorescence development, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0055062 - phosphate ion homeostasis","TO:0000050 - inflorescence branching, TO:0000501 - spikelet weight, TO:0000456 - spikelet number, TO:0000621 - inflorescence development trait, TO:0000462 - gelatinization temperature, TO:0000374 - breakdown viscosity, TO:0000409 - peak viscosity","PO:0001083 - inflorescence development stage ","Os11g0558200","LOC_Os11g35390.1",{"$nulls":6},"CPS2","OsCPS2, cps2, OsCPS2ent, CYC2, OsCyc2, OsCYC2, OsCPSL1, cpsl1, OsCyc2/OsCPS2, OsTPS7, Os-CPS2","ENT-COPALYL DIPHOSPHATE SYNTHASE 2","rice ent-copalyl diphosphate (CDP) synthase2, ent-copalyl diphosphate synthase 2, Ent-CDP synthase 2, ent-copalyl diphosphate synthase like 1, cyclase2, cyclase 2, ent-CDP synthase, terpene synthase 7",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016829 - lyase activity, GO:0052315 - phytoalexin biosynthetic process, GO:0010039 - response to iron ion, GO:0006952 - defense response, GO:0005739 - mitochondrion, GO:0050832 - defense response to fungus, GO:0009411 - response to UV, GO:0042742 - defense response to bacterium, GO:0008152 - metabolic process, GO:0000287 - magnesium ion binding, GO:0009536 - plastid, GO:0009685 - gibberellin metabolic process, GO:0009975 - cyclase activity, GO:0009905 - ent-copalyl diphosphate synthase activity, GO:0051504 - diterpene phytoalexin precursor biosynthetic process pathway","TO:0000599 - enzyme activity, TO:0000074 - blast disease, TO:0000357 - growth and development trait, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0000160 - UV light sensitivity",null,"Os02g0571100","LOC_Os02g36210.1",null,"Os04g0508300","Os02g0760000",1.0780295,0]
[{"$nulls":24},"Os03g0781000","Os01g0837300","Os01g0837300",-1.0362301,0,null,"Os10g0477600",3.2570317,"Os07g0564700",-1.1438307,{"$nulls":29},"XA41","OsSWEET14, SWEET14, Os11N3, Os-11N3, 11N3, Xa41(t), xa41, Os11N3/SWEET14, OsSWEET14/Os11N3","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 41","Xanthomonas oryzae pv. oryzae resistance 41",11," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0051119 - sugar transmembrane transporter activity, GO:0009739 - response to gibberellin stimulus, GO:0015770 - sucrose transport, GO:0071215 - cellular response to abscisic acid stimulus, GO:0016021 - integral to membrane, GO:0009751 - response to salicylic acid stimulus, GO:0005887 - integral to plasma membrane, GO:0009733 - response to auxin stimulus, GO:0010150 - leaf senescence, GO:0002237 - response to molecule of bacterial origin, GO:0042742 - defense response to bacterium, GO:0034219 - carbohydrate transmembrane transport, GO:0008515 - sucrose transmembrane transporter activity","TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000163 - auxin sensitivity, TO:0000207 - plant height","PO:0009015 - portion of vascular tissue , PO:0009005 - root , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009047 - stem ","Os11g0508600","LOC_Os11g31190.1",{"$nulls":7},"DHD4","OsCCT02, OsCCT2, OsCMF2, OsSTA46, OsDHD4, CCT02, CCT2, CMF2, STA46","DELAYED HEADING DATE 4 ","CCT domain-containing gene 2, CCT (CO, CO-LIKE and TOC1) domain protein 2, CCT domain protein 2, CCT MOTIF FAMILY (CMF) gene 2, Delayed Heading Date 4",2," Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0048573 - photoperiodism, flowering, GO:0005634 - nucleus","TO:0002616 - flowering time, TO:0000137 - days to heading","PO:0009066 - anther ","Os02g0110100","LOC_Os02g01990.1",{"$nulls":6},"FBOX33","OsFbox033, OsFbox33, Fbox33, Os_F0114, OsFBK1, FBK1","F-BOX PROTEIN 33","F-box protein 33, F-box Kelch 1",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0048437 - floral organ development, GO:0009733 - response to auxin stimulus, GO:0019005 - SCF ubiquitin ligase complex, GO:0048364 - root development, GO:0048653 - anther development, GO:0052386 - cell wall thickening","TO:0000269 - 100-seed weight, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000531 - anther length, TO:0000625 - spikelet density, TO:0000564 - spikelet width, TO:0006013 - carpel number, TO:0000225 - stamen number, TO:0006029 - glume number, TO:0000734 - grain length, TO:0000391 - seed size, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002600 - flower organ size, TO:0006038 - floral organ number, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000622 - flower development trait, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance","PO:0000040 - adventitious root nodule , PO:0009013 - portion of meristem tissue , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0025545 - anther wall tapetum cell , PO:0009010 - seed , PO:0009046 - flower , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage , PO:0025585 - floral organ formation stage , PO:0007520 - root development stage , PO:0001004 - anther development stage ","Os01g0659900","LOC_Os01g47050.1",{"$nulls":6},"KS4","OsKS4, KS4, KSL4, OsKSL4, DTS2, OsDTS2, OsTPS16, TPS16","ENT-KAURENE SYNTHASE 4","rice ent-kaurene synthase4, Ent-kaurene synthase 4, Ent-kaurene synthase-like 4, Ent-kaurene synthase like-4, \\Syn-pimara-7, 15-diene synthase\\\", \\\"9-beta-pimara-7, 15-diene synthase\\\", syn-pimara-7 15-diene synthase, syn Pimaradiene synthase, KAURENE SYNTHASE-LIKE 4, terpene synthase 16\"",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0000287 - magnesium ion binding, GO:0008152 - metabolic process, GO:0034279 - syn-pimara-7,15-diene synthase activity, GO:0051501 - diterpene phytoalexin metabolic process, GO:0010200 - response to chitin, GO:0002238 - response to molecule of fungal origin, GO:0002237 - response to molecule of bacterial origin, GO:0052315 - phytoalexin biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009899 - ent-kaurene synthase activity, GO:0009536 - plastid, GO:0016829 - lyase activity","TO:0002669 - diterpenoid phytoalexin content, TO:0000175 - bacterial blight disease resistance, TO:0000357 - growth and development trait, TO:0000160 - UV light sensitivity, TO:0000599 - enzyme activity, TO:0002670 - momilactone A content",null,"Os04g0179700","LOC_Os04g10060.1",null,"Os10g0370100","Os04g0572400",1.0779666,0]
[{"$nulls":24},"Os05g0101600","Os03g0684400","Os03g0684400",-1.0513583,0,null,"Os08g0489300",3.2568026,"Os01g0343001",-1.1433519,{"$nulls":29},"SAP11","OsDOG, OsSAP11, DOG","STRESS ASSOCIATED PROTEIN GENE 11","Oryza sativa dwarf rice with overexpression of gibberellin-induced gene, dwarf rice with overexpression of gibberellin-induced gene, stress associated protein 11",8," Vegetative organ - Culm,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0009408 - response to heat, GO:0042542 - response to hydrogen peroxide, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000207 - plant height, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity","PO:0001170 - seed development stage ","Os08g0504700 ","LOC_Os08g39450.1",{"$nulls":7},"CMF3","OsCCT03, CCT03, OsCCT3, CCT3, OsCMF3","CCT MOTIF FAMILY GENE 3","CCT domain-containing gene 3, CCT (CO, CO-LIKE and TOC1) domain protein 3, CCT domain protein 3, CCT MOTIF FAMILY (CMF) gene 3",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007623 - circadian rhythm, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0048578 - positive regulation of long-day photoperiodism, flowering, GO:0009648 - photoperiodism","TO:0000326 - leaf color, TO:0000137 - days to heading, TO:0000456 - spikelet number, TO:0000229 - photoperiod sensitivity, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000495 - chlorophyll content",null,"Os02g0148000","LOC_Os02g05470.1, LOC_Os02g05470.2",{"$nulls":6},"PL3","OsPL3","_","PLUS3 domain-containing protein",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016593 - Cdc73/Paf1 complex, GO:0003677 - DNA binding","TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000455 - seed set percent","PO:0025034 - leaf ","Os01g0775100","LOC_Os01g56780.3, LOC_Os01g56780.2, LOC_Os01g56780.1",{"$nulls":6},"KS7","OsKS7, KS7, KSL7, OsKSL7, DTC1, OsDTC1, OsKS3, OsDTC1/OsKS7, OsTPS6, TPS6","ENT-KAURENE SYNTHASE 7","rice ent-kaurene synthase7, Ent-kaurene synthase 7, Ent-kaurene synthase-like 7, Ent-cassa-12, 15-diene synthase, ent-Cassadiene synthase, Diterpene cyclase 1, Oryza sativa diterpene cyclase 1, terpene synthase 6",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0009899 - ent-kaurene synthase activity, GO:0016829 - lyase activity, GO:0008152 - metabolic process, GO:0051501 - diterpene phytoalexin metabolic process, GO:0052315 - phytoalexin biosynthetic process, GO:0005739 - mitochondrion, GO:0006952 - defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0034277 - ent-cassa-12,15-diene synthase activity, GO:0050832 - defense response to fungus, GO:0000287 - magnesium ion binding, GO:0009536 - plastid","TO:0002675 - gibberellic acid content, TO:0000172 - jasmonic acid sensitivity, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000599 - enzyme activity, TO:0000357 - growth and development trait",null,"Os02g0570400","LOC_Os02g36140.2, LOC_Os02g36140.5, LOC_Os02g36140.4, LOC_Os02g36140.3",null,"Os03g0666100","Os06g0153000",1.074632,0]
[{"$nulls":24},"Os04g0495500","Os04g0690800","Os04g0690800",-1.0579969,0,null,"Os09g0520550",3.256569,"Os10g0456400",-1.143148,{"$nulls":29},"NRFG2","PFL, OsNRFG2","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 2","Protodermal Factor Like, neo-tetraploid rice fertility related gene 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000040 - panicle length, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait",null,"Os06g0553200","LOC_Os06g35970.1, LOC_Os06g35970.2",{"$nulls":7},"CMF14","OsCCT41, CCT41, OsCMF14","CCT MOTIF FAMILY GENE 14","CCT domain-containing gene 41, CCT (CO, CO-LIKE and TOC1) domain protein 41, CCT domain protein 41, CCT MOTIF FAMILY (CMF) gene 14",12," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048576 - positive regulation of short-day photoperiodism, flowering","TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000456 - spikelet number",null,"Os12g0262400","LOC_Os12g16160.1",{"$nulls":6},"LIN1","OsLIN1","LONG GRAIN 1",null,6," Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000734 - grain length, TO:0000590 - grain weight","PO:0001170 - seed development stage ","Os06g0675200","LOC_Os06g46250.1",{"$nulls":6},"KS8","OsKS8, KS8, KSL8, OsKSL8, DTC2, OsDTC2, OsDTC2/OsKS8, OsTPS32","ENT-KAURENE SYNTHASE 8","rice ent-kaurene synthase8, Ent-kaurene synthase 8, Stemar-13-ene synthase, Stemarene synthase, syn-Stemarene synthase, Ent-kaurene synthase-like 8, Diterpene cyclase 2, terpene synthase 32",11," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0009753 - response to jasmonic acid stimulus, GO:0009609 - response to symbiotic bacterium, GO:0051502 - diterpene phytoalexin biosynthetic process, GO:0009899 - ent-kaurene synthase activity, GO:0009536 - plastid, GO:0008152 - metabolic process, GO:0006952 - defense response, GO:0000287 - magnesium ion binding, GO:0034278 - stemar-13-ene synthase activity, GO:0051501 - diterpene phytoalexin metabolic process, GO:0016829 - lyase activity, GO:0050832 - defense response to fungus, GO:0052315 - phytoalexin biosynthetic process","TO:0000172 - jasmonic acid sensitivity, TO:0000074 - blast disease","PO:0009005 - root ","Os11g0474800","LOC_Os11g28530.1, LOC_Os11g28530.2, LOC_Os11g28530.3",null,"Os11g0225300","Os03g0767800",1.0657244,0]
[{"$nulls":24},"Os02g0503100","Os02g0704300","Os02g0704300",-1.059157,0,null,"Os10g0390500",3.2548683,"Os04g0411800",-1.1420363,{"$nulls":29},"EXPB6","OsEXPB6, osaEXPb1.8, EXPb1.8","BETA-EXPANSIN 6","Expansin-B6, Beta-expansin-6",10," Biochemical character,  Vegetative organ - Culm","GO:0005618 - cell wall, GO:0016020 - membrane, GO:0005576 - extracellular region, GO:0019953 - sexual reproduction","TO:0000207 - plant height",null,"Os10g0555600","LOC_Os10g40700.1",{"$nulls":7},"_","DFO1, EMF1, OsDFO1, OsEMF1, CCP1, OsCCP1","_","DEFORMED FLORAL ORGAN1, DEFORMED FLORAL ORGAN 1, EMBRYONIC FLOWER1, EMBRYONIC FLOWER 1, CURVED CHIMERIC PALEA 1",1," Reproductive organ - Spikelet, flower, glume, awn","GO:0009741 - response to brassinosteroid stimulus, GO:0048497 - maintenance of floral organ identity, GO:0009908 - flower development, GO:0048437 - floral organ development, GO:0005634 - nucleus, GO:0040029 - regulation of gene expression, epigenetic, GO:0009742 - brassinosteroid mediated signaling","TO:0000734 - grain length, TO:0000614 - lemma shape, TO:0002677 - brassinosteroid sensitivity, TO:0000622 - flower development trait, TO:0000499 - flower anatomy and morphology trait, TO:0000373 - inflorescence anatomy and morphology trait","PO:0007615 - flower development stage , PO:0001048 - palea development stage ","Os01g0229300","LOC_Os01g12890.1",{"$nulls":6},"BSR2","OsBSR2, CYP78A15, OsCYP78A15","BROAD-SPECTRUM RESISTANCE 2","BROAD-SPECTRUM RESISTANCE2, Cytochrome P450 78A15",8," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0020037 - heme binding, GO:0080112 - seed growth, GO:0050832 - defense response to fungus","TO:0000650 - lemma length, TO:0000531 - anther length, TO:0020033 - glume length, TO:0002610 - pistil length, TO:0000734 - grain length, TO:0000420 - fertility related trait, TO:0000360 - leaf elongation rate, TO:0000146 - seed length, TO:0002600 - flower organ size, TO:0000255 - sheath blight disease resistance, TO:0000391 - seed size, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009037 - lemma , PO:0009049 - inflorescence , PO:0009005 - root , PO:0025034 - leaf ","Os08g0547300","LOC_Os08g43390.1",{"$nulls":6},"GI","OsGI, Gi, Os-GI","GIGANTEA","orthologue of the arabidopsis GIGANTEA, Gigantea, protein GIGANTEA, Os-GIGANTEA, OsGIGANTEA",1," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0047484 - regulation of response to osmotic stress, GO:0048511 - rhythmic process, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0007623 - circadian rhythm, GO:0030154 - cell differentiation, GO:0009266 - response to temperature stimulus, GO:0030187 - melatonin biosynthetic process, GO:0010119 - regulation of stomatal movement, GO:0009414 - response to water deprivation","TO:0000328 - sucrose content, TO:0006002 - proline content, TO:0000095 - osmotic response sensitivity, TO:0001018 - transpiration rate, TO:0000523 - stomatal resistance, TO:0000278 - root to shoot ratio, TO:0000227 - root length, TO:0000276 - drought tolerance, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000432 - temperature response trait, TO:0000075 - light sensitivity","PO:0009005 - root , PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0009049 - inflorescence ","Os01g0182600","LOC_Os01g08700.8, LOC_Os01g08700.6, LOC_Os01g08700.5, LOC_Os01g08700.1, LOC_Os01g08700.2, LOC_Os01g08700.3, LOC_Os01g08700.4",null,"Os06g0173100","Os03g0734900",1.0555553,0]
[{"$nulls":24},"Os09g0532900","Os10g0137000","Os10g0137000",-1.1048355,0,null,"Os03g0799200",3.2545254,"Os01g0128400",-1.1413443,{"$nulls":29},"SIZ1","OsSIZ1, OsSIZ1.1, OsSIZ1.2, OsSIZ1.3, DLN131, OsDLN131, OsPHD23, PHD23","_","SAP and MIZ 1, SUMO ligase Siz1, Siz/PIAS-type SUMO ligase 1, SIZ/PIAS-type SUMO E3 ligase 1, E3 SUMO-protein ligase SIZ1, DLN repressor 131, DLN motif protein 131, Plant homeo-domain finger protein 23, PHD finger protein 23",5," Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009901 - anther dehiscence, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0003676 - nucleic acid binding, GO:0016874 - ligase activity","TO:0000342 - panicle axis angle, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000146 - seed length, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0125000","LOC_Os05g03430.3, LOC_Os05g03430.2, LOC_Os05g03430.1",{"$nulls":7},"THI12","Osthi12, thi12, OsTHION15, THION15","THIONIN 12","thionin 12",6," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0048443 - stamen development","TO:0000439 - fungal disease resistance, TO:0006022 - floral organ development trait, TO:0000315 - bacterial disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance","PO:0009010 - seed , PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0025585 - floral organ formation stage ","Os06g0517700","LOC_Os06g32600.1",{"$nulls":6},"ML4","OML4, OsML4","MEI2-LIKE PROTEIN 4","MEI2-LIKE PROTEIN4, LARGE1, LARGE 1",2," Seed - Morphological traits - Grain shape","GO:0003676 - nucleic acid binding, GO:0030308 - negative regulation of cell growth, GO:0005634 - nucleus, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0003723 - RNA binding","TO:0000590 - grain weight, TO:0000397 - grain size","PO:0009010 - seed ","Os02g0517531","LOC_Os02g31290.2, LOC_Os02g31290.1",{"$nulls":6},"KO4","OsKO4, OsKOL4, KOS1, CYP701A8, OsCYP701A8, OsKO2, CYP701A8/OsKOL4","ENT-KAURENE OXIDASE 4","rice ent-kaurene oxidase4, cytochrome P450 701A8",6," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0010336 - gibberellic acid homeostasis, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0009739 - response to gibberellin stimulus, GO:0010241 - ent-kaurene oxidase activity, GO:0080006 - internode patterning, GO:0050832 - defense response to fungus, GO:0009055 - electron carrier activity, GO:0009686 - gibberellin biosynthetic process, GO:0020037 - heme binding, GO:0004497 - monooxygenase activity","TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0002675 - gibberellic acid content, TO:0000145 - internode length",null,"Os06g0569500","LOC_Os06g37300.1, LOC_Os06g37300.2",null,"Os06g0231300","Os05g0530500",1.0487126,0]
[{"$nulls":24},"Os11g0204600","Os08g0517300","Os08g0517300",-1.1183492,0,null,"Os08g0224300",3.2541883,"Os02g0634900",-1.1412064,{"$nulls":29},"EXPA10","OsEXPA10, OsEXP10, osaEXPa1.28","ALPHA-EXPANSIN 10","Expansin-A10",4," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0009751 - response to salicylic acid stimulus, GO:0005576 - extracellular region, GO:0005618 - cell wall, GO:0048364 - root development, GO:0009664 - plant-type cell wall organization, GO:0016020 - membrane, GO:0009826 - unidimensional cell growth, GO:0009737 - response to abscisic acid stimulus, GO:0002213 - defense response to insect, GO:0042742 - defense response to bacterium, GO:0010044 - response to aluminum ion","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000354 - aluminum sensitivity, TO:0000397 - grain size, TO:0000173 - ethylene sensitivity, TO:0000306 - root thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000227 - root length, TO:0000734 - grain length, TO:0000656 - root development trait","PO:0007520 - root development stage , PO:0009005 - root , PO:0000025 - root tip ","Os04g0583500","LOC_Os04g49410.1",{"$nulls":7},"_","OsSTA258","_","Ankyrin, Ankyrin repeat domain containing protein",11," Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0435800","LOC_Os11g24840.1, LOC_Os11g24850.1",{"$nulls":6},"PK3","OsPK3","PYRUVATE KINASE 3","pyruvate kinase 3",null," Seed - Physiological traits - Storage substances","GO:0005739 - mitochondrion, GO:0010431 - seed maturation, GO:0015770 - sucrose transport","TO:0002661 - seed maturation","PO:0025034 - leaf , PO:0007632 - seed maturation stage ",{"$nulls":8},"GA2OX1","OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1","GIBBERELLIN 2-OXIDASE 1 ","rice GA 2-oxidase1, GA 2-oxidase 1, Gibberellin 2-oxidase 1",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016216 - isopenicillin-N synthase activity, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0017000 - antibiotic biosynthetic process, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process","TO:0000303 - cold tolerance, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height",null,"Os05g0158600","LOC_Os05g06670.1",null,"Os05g0164800","Os01g0559500",1.0345987,0]
[{"$nulls":24},"Os08g0504500","Os01g0765000","Os01g0765000",-1.1396238,0,null,"Os08g0473800",3.2448514,"Os02g0105900",-1.1409374,{"$nulls":29},"SODCC2","Cu/Zn-SOD, Cu/Zn- SOD, OsSODB, OsSOD3, SodCc2, Os SodCc2, sodB, OsSodB, RSODB, OssodCc1, OsCSD1.1, CSD1.1, OsCDS1, OsSOD3-CU/Zn, SOD3-CU/Zn, CuZnSOD2, Cu/ZnSOD2, OsCu/ZnSOD2, OsCSD1, CSD1, CuZnSOD1","CYTOSOLIC SUPEROXIDASE DISMUTASE 2","Cu/Zn-superoxide dismutase, superoxide dismutase B, copper/zinc-superoxide dismutase, \\Cu, Zn superoxide dismutase\\\", cytosolic copper/zinc-superoxide dismutase 2, \\\"Superoxide dismutase (Cu-Zn) 4, cytosolic\\\", Cu-dependent SOD 1.1\"",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0019430 - removal of superoxide radicals, GO:0006979 - response to oxidative stress, GO:0012501 - programmed cell death, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0005507 - copper ion binding, GO:0004784 - superoxide dismutase activity, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0010039 - response to iron ion, GO:0009845 - seed germination","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0002657 - oxidative stress, TO:0000040 - panicle length, TO:0000447 - filled grain number","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage , PO:0005360 - aleurone layer ","Os07g0665200","LOC_Os07g46990.2, LOC_Os07g46990.1",{"$nulls":7},"_","OsSTA28","_",null,1," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0046872 - metal ion binding","TO:0000053 - pollen sterility","PO:0009066 - anther , PO:0025281 - pollen , PO:0000002 - anther wall "," Os01g0700200  ","LOC_Os01g50470.1",{"$nulls":6},"PK4","OsPK4","PYRUVATE KINASE 4","pyruvate kinase 4",12," Seed - Physiological traits - Storage substances","GO:0005829 - cytosol, GO:0004743 - pyruvate kinase activity, GO:0030955 - potassium ion binding, GO:0000287 - magnesium ion binding, GO:0016301 - kinase activity, GO:0005524 - ATP binding, GO:0005739 - mitochondrion, GO:0005737 - cytoplasm, GO:0006096 - glycolysis","TO:0000266 - chalky endosperm",null,"Os12g0145700","LOC_Os12g05110.1",{"$nulls":6},"GA2OX2","OsGA2ox2, ga2ox 2, OsGA2ox-2","GIBBERELLIN 2-OXIDASE 2","rice GA 2-oxidase2, GA 2-oxidase 2, Gibberellin 2-oxidase 2",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009725 - response to hormone stimulus, GO:0009685 - gibberellin metabolic process, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0002675 - gibberellic acid content, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height",null,"Os01g0332200","LOC_Os01g22910.1, LOC_Os01g22920.1",null,"Os12g0116600","Os02g0815500",1.030755,0]
[{"$nulls":24},"Os02g0197600","Os12g0133700","Os12g0133700",-1.1630388,0,null,"Os08g0374000",3.2430859,"Os09g0109500",-1.140852,{"$nulls":29},"TIFY11A","OsJAZ3, JAZ3, OsJAZ 9, OsJAZ9, Os-JAZ9, JAZ9, OsTIFY11a, OsJAZ6, JAZ6","TIFY GENE 11A","Jasmonate ZIM-domain protein 3, Jasmonate ZIM-domain protein 9",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000397 - grain size",null,"Os03g0180800","LOC_Os03g08310.1",{"$nulls":7},"_","OsSTA99","_",null,3," Reproductive organ - Spikelet, flower, glume, awn","GO:0009860 - pollen tube growth, GO:0009846 - pollen germination",null,"PO:0009066 - anther , PO:0025281 - pollen , PO:0000002 - anther wall "," Os03g0353600  ","LOC_Os03g23030.1",{"$nulls":6},"GSA1","OsGSA1, UGT83A1, OsUGT83A1","GRAIN SIZE AND ABIOTIC STRESS TOLERANCE 1","Grain Size and Abiotic stress tolerance 1, UDP-glucosyltransferase 83A1",3," Biochemical character,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0008194 - UDP-glycosyltransferase activity, GO:0009698 - phenylpropanoid metabolic process, GO:0010229 - inflorescence development, GO:0010600 - regulation of auxin biosynthetic process, GO:0001558 - regulation of cell growth, GO:0042127 - regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0009809 - lignin biosynthetic process, GO:0009962 - regulation of flavonoid biosynthetic process","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000657 - spikelet anatomy and morphology trait, TO:0000290 - flavonoid content, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000259 - heat tolerance, TO:0002672 - auxin content","PO:0009051 - spikelet ","Os03g0757500","LOC_Os03g55040.1",{"$nulls":6},"GA2OX3","OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3, GA2ox4","GIBBERELLIN 2-OXIDASE 3","rice GA 2-oxidase3, GA 2-oxidase 3, Gibberellin 2-oxidase 3",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009742 - brassinosteroid mediated signaling, GO:0009741 - response to brassinosteroid stimulus, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0009725 - response to hormone stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009685 - gibberellin metabolic process","TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000207 - plant height",null,"Os01g0757200","LOC_Os01g55240.1",null,"Os03g0185600","Os08g0445700",1.030279,0]
[{"$nulls":24},"Os04g0649700","Os08g0162400","Os08g0162400",-1.1818004,0,null,"Os08g0272400",3.2413456,"Os05g0150300",-1.140707,{"$nulls":29},"EG2","OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, JAZ1, EG2/OsJAZ1, EG2, JAZ1/EG2","EXTRA GLUME 2","Jasmonate ZIM-domain protein 1, Jasmonate ZIM-domain protein 10, extra glume 2, TIFY gene 3",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0048449 - floral organ formation, GO:0010582 - floral meristem determinacy, GO:0009611 - response to wounding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0009651 - response to salt stress","TO:0000657 - spikelet anatomy and morphology trait, TO:0000172 - jasmonic acid sensitivity, TO:0000397 - grain size, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000276 - drought tolerance, TO:0000590 - grain weight, TO:0000227 - root length, TO:0000615 - abscisic acid sensitivity, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os04g0653000","LOC_Os04g55920.5, LOC_Os04g55920.1, LOC_Os04g55920.2",{"$nulls":7},"DGK6","OsSTA208, OsDGK6","DIACYLGLYCEROL KINASE 6","Diacylglycerol kinase 6",8," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007205 - activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, GO:0004143 - diacylglycerol kinase activity, GO:0003951 - NAD+ kinase activity","TO:0000053 - pollen sterility, TO:0000187 - anther color","PO:0009066 - anther , PO:0000002 - anther wall "," Os08g0249600  ","LOC_Os08g15090.1",{"$nulls":6},"NRFG6","OsNRFG6","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 6","neo-tetraploid rice fertility related gene 6",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0048544 - recognition of pollen","TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000152 - panicle number",null,"Os06g0602500","LOC_Os06g40030.1",{"$nulls":6},"SBI","GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4","SHORTENED BASAL INTERNODES","rice GA 2-oxidase4, GA 2-oxidase 4, Gibberellin 2-oxidase 4",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell, GO:0009685 - gibberellin metabolic process, GO:0080006 - internode patterning, GO:0009725 - response to hormone stimulus, GO:0009409 - response to cold","TO:0000401 - plant growth hormone sensitivity, TO:0000068 - lodging incidence, TO:0000303 - cold tolerance, TO:0000145 - internode length, TO:0000207 - plant height","PO:0005005 - shoot internode , PO:0009047 - stem ","Os05g0514600","LOC_Os05g43880.1",null,"Os08g0500000","Os03g0802500",1.0286683,0]
[{"$nulls":24},"Os04g0470600","Os09g0294000","Os09g0294000",-1.3360862,0,null,"Os02g0719600",3.2366645,"Os02g0597200",-1.1401769,{"$nulls":29},"_","OsRcaII, rca, RCAII, rcaII, OsRcaI, RCAI, ME137, OsRCA1, RCA, RCAalpha","_","Rubisco activase, the small isoform of rice Rubisco activase, Rubisco activase small isoform, \\ribulose-1, 5-bisphosphate carboxylase/oxygenase activase\\\", Rubisco activase II, Rubisco activase large isoform, Rubisco activase I, Rubisco-A, RuBisCO activase A1\"",11," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009570 - chloroplast stroma, GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus, GO:0005524 - ATP binding","TO:0000229 - photoperiod sensitivity, TO:0000207 - plant height, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity",null,"Os11g0707000","LOC_Os11g47970.1",{"$nulls":7},"LPR5","OsSTA2, STA2, OsLPR5","LOW PHOSPHATE ROOT 5","Low Phosphate Root5, Low Phosphate Root 5",1," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048364 - root development, GO:0016036 - cellular response to phosphate starvation, GO:0005783 - endoplasmic reticulum, GO:0005618 - cell wall, GO:0004322 - ferroxidase activity, GO:0042594 - response to starvation, GO:0006817 - phosphate transport, GO:0055062 - phosphate ion homeostasis","TO:0000357 - growth and development trait, TO:0000371 - yield trait, TO:0000465 - mineral and ion content related trait, TO:0000656 - root development trait","PO:0007520 - root development stage , PO:0020141 - stem node , PO:0006012 - leaf collar , PO:0009066 - anther , PO:0009005 - root ","Os01g0127200","LOC_Os01g03640.1",{"$nulls":6},"KIN7L","OsKIN7L","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 7L","kinesin motor domain containing protein 7L",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement","TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000371 - yield trait",null,"Os11g0552600","LOC_Os11g35090.1",{"$nulls":6},"qPHO-6(t)","qPHO-6(t)","phosphorous deficiency tolerance (QTL)-6(t)","phosphorous deficiency tolerance (QTL)-6(t)",6," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os07g0623300","Os02g0116600",1.0241575,0]
[{"$nulls":24},"Os04g0683600","Os07g0558000","Os07g0558000",-1.3857998,0,null,"Os05g0565400",3.2351167,"Os02g0146600",-1.1400763,{"$nulls":29},"4CL3","Os4CL3, Os4CL2, Os4CL, 4CL2, 4CL","4-COUMARATE:COENZYME A LIGASE 3","4-coumarate:coenzyme A ligase 3, 4-hydroxycinnamate CoA ligase 2",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009807 - lignan biosynthetic process, GO:0009411 - response to UV, GO:0016207 - 4-coumarate-CoA ligase activity, GO:0052386 - cell wall thickening, GO:0009834 - secondary cell wall biogenesis, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0009698 - phenylpropanoid metabolic process, GO:0009809 - lignin biosynthetic process","TO:0000051 - stem strength, TO:0000160 - UV light sensitivity, TO:0000074 - blast disease, TO:0000733 - lignin biosynthesis trait, TO:0000011 - nitrogen sensitivity, TO:0000731 - lignin content",null,"Os02g0177600","LOC_Os02g08100.1",{"$nulls":7},"_","OsSTA4, OsRhmbd1, RHMBD1","_","Rhomboid 1, RHOMBOID 1",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004252 - serine-type endopeptidase activity, GO:0016021 - integral to membrane",null,"PO:0009066 - anther ","Os01g0147300","LOC_Os01g05430.1",{"$nulls":6},"KIN14M","OsKIN14M","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 14M","kinesin motor domain containing protein 14M",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement, GO:0016887 - ATPase activity, GO:0008017 - microtubule binding","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight",null,"Os06g0554700","LOC_Os06g36080.1",{"$nulls":6},"BPH14","Bph14 (Qbp1), Bph14, Qbp1, qBPH-3","BROWN PLANTHOPPER RESISTANCE 14","brown planthopper resistance 14, Brown planthopper resistance-14, BROWN PLANTHOPPER RESISTANCE14",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0002213 - defense response to insect, GO:0009625 - response to insect, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os03g0848700","LOC_Os03g63150.1, LOC_Os03g63150.2",null,"Os11g0114600","Os03g0712700",1.0213679,0]
[{"$nulls":24},"Os11g0530600","Os02g0559800","Os02g0559800",-1.391642,0,null,"Os01g0901000",3.2319505,"Os05g0471000",-1.1398734,{"$nulls":29},"NRFG3","OsENODL17, ENODL17, OsNRFG3","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 3","early nodulin-like protein 17, neo-tetraploid rice fertility related gene 3",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0009055 - electron carrier activity, GO:0005507 - copper ion binding, GO:0046658 - anchored to plasma membrane","TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility","PO:0009066 - anther , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os06g0553800","LOC_Os06g36010.1",{"$nulls":7},"_","OsSTA5","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0178700","LOC_Os01g08340.1",{"$nulls":6},"MAPKKK63","OsMAPKKK63","MAP KINASE KINASE KINASE 63","MAP kinase kinase kinase 63",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0010231 - maintenance of seed dormancy, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0048623 - seed germination on parent plant, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000253 - seed dormancy, TO:0000619 - vivipary, TO:0000430 - germination rate, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os01g0699100","LOC_Os01g50370.1",{"$nulls":6},"BPH15","Bph15 (Qbp2), Bph15, Qbp2, qBPH-4","BROWN PLANTHOPPER RESISTANCE 15","brown planthopper resistance 15, Brown planthopper resistance-15, Brown planthopper resistance introduced from Oryza australiensis",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009006 - shoot system , PO:0009025 - vascular leaf ",{"$nulls":3},"Os03g0243300","Os02g0707900",1.0202408,0]
[{"$nulls":24},"Os01g0848200","Os05g0498900","Os05g0498900",-1.3933231,0,null,"Os10g0159600",3.2317324,"Os10g0482900",-1.1388675,{"$nulls":29},"DMT1","OsMCA1, MCA1, OsDMT1, OsDMT1/OsMCA1","DWARF AND MULTI-TILLERING1","Plasma membrane protein OsMCA1, Mid1-complementing activity1, dwarf and multi-tillering 1",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0070509 - calcium ion import, GO:0009685 - gibberellin metabolic process, GO:0050801 - ion homeostasis, GO:0005886 - plasma membrane, GO:0005887 - integral to plasma membrane, GO:0048528 - post-embryonic root development, GO:0007638 - mechanosensory behavior","TO:0000456 - spikelet number, TO:0002675 - gibberellic acid content, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os03g0157300","LOC_Os03g06120.3, LOC_Os03g06120.2, LOC_Os03g06120.1",{"$nulls":7},"_","OsSTA6","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0193400","LOC_Os01g09730.1, LOC_Os01g09730.2",{"$nulls":6},"TAC4","OsTAC4","TILLER ANGLE CONTROL 4","Tiller Angle Control 4",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009630 - gravitropism, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009826 - unidimensional cell growth","TO:0000567 - tiller angle, TO:0000447 - filled grain number, TO:0000145 - internode length, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002693 - gravity response trait, TO:0002672 - auxin content, TO:0000547 - primary branch number, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0000040 - panicle length","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0008017 - leaf sheath pulvinus , PO:0020148 - shoot apical meristem , PO:0000232 - axillary bud meristem ","Os02g0450000","LOC_Os02g25230.1",{"$nulls":6},"BWMK1","OsBWMK1, MPK12, MAPK1, OsMAPK1, OsMPK12, OsMPK17-1, MPK17-1, OsBWMK1L, OsBWMK1M, OsBWMK1S, OsMAPK17-1, MAPK17-1, MAPK12, OsMAPK12","BLAST- AND WOUND- INDUCIBLE MAPK GENE 1","blast- and wound- inducible MAPK gene-1, Blast- and wound-induced MAP kinase 1, Mitogen-activated protein kinase 12, MAP kinase 12, MAP kinase 1, MAP kinase 17",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0009738 - abscisic acid mediated signaling, GO:0002213 - defense response to insect, GO:0009863 - salicylic acid mediated signaling pathway, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0009814 - defense response, incompatible interaction, GO:0004707 - MAP kinase activity, GO:0042742 - defense response to bacterium, GO:0006468 - protein amino acid phosphorylation, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0000165 - MAPKKK cascade, GO:0009723 - response to ethylene stimulus, GO:0009862 - systemic acquired resistance, salicylic acid mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0005739 - mitochondrion, GO:0005829 - cytosol, GO:0005524 - ATP binding","TO:0000424 - brown planthopper resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000173 - ethylene sensitivity, TO:0000074 - blast disease, TO:0000112 - disease resistance",null,"Os06g0708000","LOC_Os06g49430.2, LOC_Os06g49430.1",null,"Os03g0136900","Os01g0958400",1.0156177,0]
[{"$nulls":24},"Os11g0454000","Os05g0552800","Os05g0552800",-1.4038657,0,null,"Os11g0229300",3.2305849,"Os04g0508800",-1.137682,{"$nulls":29},"_","OsAFB2, ABF2, OsAFB2-1, OsAFB2-2, OsFbox206, Os_F0492, OsTIR1, TIR1","_","Auxin signaling f-box 2, Auxin F-box protein 2, F-box protein 206, transport inhibitor response 1",4," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0009734 - auxin mediated signaling pathway, GO:0010011 - auxin binding, GO:0019005 - SCF ubiquitin ligase complex, GO:0005634 - nucleus, GO:0000822 - inositol hexakisphosphate binding, GO:0010104 - regulation of ethylene mediated signaling pathway","TO:0000227 - root length, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity",null,"Os04g0395600","LOC_Os04g32460.1, LOC_Os04g32460.2",{"$nulls":7},"_","OsSTA10","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0268700","LOC_Os01g16320.1",{"$nulls":6},"LKR/SDH","OsLKR/SDH","LYSINE KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE","lysine ketoglutarate reductase/saccharopine dehydrogenase",2," Seed - Physiological traits - Storage substances","GO:0016491 - oxidoreductase activity","TO:0000598 - protein content, TO:0002673 - amino acid content","PO:0009010 - seed , PO:0005360 - aleurone layer , PO:0009089 - endosperm ","Os02g0783700","LOC_Os02g54254.4, LOC_Os02g54254.3, LOC_Os02g54254.2, LOC_Os02g54254.1",{"$nulls":6},"FLO4","FLO4-4, flo4, flo4-2, flo4-3, ppdk, OsPPDK, PPDK1, CPDK1, PPDKB, OsPPDKB, cyOsPPDKB, OsPBDK, PBDK, osppdkb, PPD, cyPPDK","FLOURY ENDOSPERM 4","floury endosperm4, floury endosperm 4, pyruvate orthophospate dikinase, \\Pyruvate, phosphate dikinase 1, chloroplastic\\\", \\\"Pyruvate, orthophosphate dikinase 1\\\", pyruvate orthophosphate dikinase, pyruvate orthophosphate dikinase B, cytosolic pyruvate orthophosphate dikinase, orthophosphate dikinase, Pyruvate phosphate dikinase\"",5," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0050242 - pyruvate, phosphate dikinase activity, GO:0019252 - starch biosynthetic process, GO:0016772 - transferase activity, transferring phosphorus-containing groups, GO:0016310 - phosphorylation, GO:0000287 - magnesium ion binding, GO:0009651 - response to salt stress, GO:0006529 - asparagine biosynthetic process, GO:0010150 - leaf senescence, GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0016740 - transferase activity, GO:0008610 - lipid biosynthetic process, GO:0009416 - response to light stimulus, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016301 - kinase activity","TO:0000249 - leaf senescence, TO:0000104 - floury endosperm, TO:0006001 - salt tolerance, TO:0000075 - light sensitivity","PO:0005360 - aleurone layer , PO:0009005 - root , PO:0009089 - endosperm , PO:0020039 - leaf lamina , PO:0001054 - 4 leaf senescence stage , PO:0020104 - leaf sheath , PO:0020110 - scutellum , PO:0007022 - seed imbibition stage ","Os05g0405000","LOC_Os05g33570.2, LOC_Os05g33570.1",null,"Os12g0479400","Os01g0881500",1.0077581,0]
[{"$nulls":24},"Os04g0577300","Os03g0751100","Os03g0751100",-1.4168788,0,null,"Os11g0210500",3.2258322,"Os07g0158900",-1.1376718,{"$nulls":29},"TIR1","OsTIR1, OsFbox248, Fbox248, Os_F071, AFB","TRANSPORT INHIBITOR RESPONSE 1","transport inhibitor response 1, Transport Inhibitor Response1, F-box protein 248, Auxin F-box protein, Auxin-signaling F-Box",5," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009734 - auxin mediated signaling pathway, GO:0010104 - regulation of ethylene mediated signaling pathway, GO:0051607 - defense response to virus, GO:0000822 - inositol hexakisphosphate binding, GO:0009635 - response to herbicide, GO:0010011 - auxin binding","TO:0000020 - black streak dwarf virus resistance, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000227 - root length, TO:0000058 - herbicide sensitivity",null,"Os05g0150500","LOC_Os05g05800.1",{"$nulls":7},"_","OsSTA11, OsRFP","_","RING Finger Protein",1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0276600","LOC_Os01g16950.1",{"$nulls":6},"LFR","OsLFR","LEAF AND FLOWER-RELATED",null,7," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0000280 - nuclear division, GO:0048366 - leaf development, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006357 - regulation of transcription from RNA polymerase II promoter, GO:0016514 - SWI/SNF complex, GO:0005654 - nucleoplasm, GO:0035060 - brahma complex, GO:0043044 - ATP-dependent chromatin remodeling, GO:0005634 - nucleus, GO:0048653 - anther development, GO:0010342 - cellularization of endosperm, GO:0009790 - embryonic development, GO:0009960 - endosperm development, GO:0006338 - chromatin remodeling, GO:0051302 - regulation of cell division, GO:0007389 - pattern specification process, GO:0010941 - regulation of cell death","TO:0000620 - embryo development trait, TO:0000345 - seed viability, TO:0000575 - endosperm related trait, TO:0000064 - embryo related trait","PO:0009010 - seed , PO:0009051 - spikelet , PO:0007631 - plant embryo stage , PO:0007633 - endosperm development stage ","Os07g0609766","LOC_Os07g41900.1",{"$nulls":6},"ABA","ABA","ABSCISIC ACID ACCUMULATION","abscisic acid accumulation",null," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os08g0323700","Os01g0242600",1.0040718,0]
[{"$nulls":24},"Os06g0326400","Os04g0450100","Os04g0450100",-1.4202466,0,null,"Os03g0603600",3.225383,"Os02g0247800",-1.1376272,{"$nulls":29},"MIR393","OsmiR393, osa-MIR393, osa-MIR393a, OsmiR393a, miR393a","MICRORNA393","MICRORNA393, MICRORNA393A",1," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0010311 - lateral root formation, GO:0035195 - gene silencing by miRNA, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0016442 - RNA-induced silencing complex, GO:0051607 - defense response to virus, GO:0009737 - response to abscisic acid stimulus, GO:0006379 - mRNA cleavage, GO:0010930 - negative regulation of auxin mediated signaling pathway, GO:0035068 - micro-ribonucleoprotein complex, GO:0009411 - response to UV, GO:0046688 - response to copper ion","TO:0000315 - bacterial disease resistance, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000329 - tillering ability, TO:0000020 - black streak dwarf virus resistance, TO:0000011 - nitrogen sensitivity, TO:0000021 - copper sensitivity, TO:0006001 - salt tolerance, TO:0000160 - UV light sensitivity, TO:0000276 - drought tolerance, TO:0000163 - auxin sensitivity",{"$nulls":10},"_","OsSTA13","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0335550","LOC_Os01g23370.1",{"$nulls":6},"SYF2","OsSYF2","SYNTHETIC LETHAL WITH CDC FORTY 2","Synthetic lethal with cdc forty 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0071014 - post-mRNA release spliceosomal complex, GO:0071013 - catalytic step 2 spliceosome, GO:0010229 - inflorescence development, GO:0010468 - regulation of gene expression, GO:0006397 - mRNA processing, GO:0080050 - regulation of seed development","TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000050 - inflorescence branching, TO:0000040 - panicle length, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002730 - grain shape","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os06g0711600","LOC_Os06g49740.2, LOC_Os06g49740.1",{"$nulls":6},"ALAAT","alaAT, ALT-1, OsAlaAT1, AlaAT1","ALANINE AMINOTRANSFERASE","alanine aminotransferase, Alanine transaminase 1, alanine-aminotransferase1",10," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004021 - L-alanine:2-oxoglutarate aminotransferase activity, GO:0019481 - L-alanine catabolic process, by transamination, GO:0030170 - pyridoxal phosphate binding, GO:0005829 - cytosol, GO:0010581 - regulation of starch biosynthetic process, GO:0001666 - response to hypoxia, GO:0005507 - copper ion binding, GO:0042594 - response to starvation, GO:0005739 - mitochondrion, GO:0046686 - response to cadmium ion, GO:0008483 - transaminase activity, GO:0009058 - biosynthetic process, GO:0009507 - chloroplast","TO:0000196 - amylose content, TO:0000696 - starch content, TO:0000011 - nitrogen sensitivity, TO:0000104 - floury endosperm","PO:0004506 - developing seed stage ","Os10g0390500","LOC_Os10g25130.1",null,"Os11g0168200","Os01g0327400",0.9993329,0]
[{"$nulls":24},"Os12g0106000","Os11g0216300","Os11g0216300",-1.4284706,0,null,"Os12g0550800",3.2240694,"Os01g0948600",-1.1375691,{"$nulls":29},"TAD1","TAD1, OsCCS52A, TE, OsWD40-61, TAD1/TE, CCS52A1","TILLERING AND DWARF 1","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0010030 - positive regulation of seed germination, GO:0032877 - positive regulation of DNA endoreduplication, GO:0042023 - DNA endoreduplication, GO:0010091 - trichome branching, GO:0010082 - regulation of root meristem growth, GO:0048507 - meristem development, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0016049 - cell growth, GO:0005737 - cytoplasm","TO:0000329 - tillering ability, TO:0002692 - root meristem development, TO:0000656 - root development trait, TO:0000615 - abscisic acid sensitivity, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000166 - gibberellic acid sensitivity","PO:0005029 - root primordium , PO:0009005 - root , PO:0006085 - root meristem , PO:0007520 - root development stage , PO:0007057 - 0 seed germination stage ","Os03g0123300","LOC_Os03g03150.1, LOC_Os03g03150.2",{"$nulls":7},"_","OsSTA15","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0356500","LOC_Os01g25440.1",{"$nulls":6},"TIF1","OsTIF1","TAA1 TRANSCRIPTIONAL INHIBITION FACTOR 1","TAA1 transcriptional inhibition factor 1",4," Seed,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0005783 - endoplasmic reticulum, GO:0010252 - auxin homeostasis, GO:0010600 - regulation of auxin biosynthetic process, GO:0009733 - response to auxin stimulus, GO:0010154 - fruit development","TO:0002672 - auxin content, TO:0000163 - auxin sensitivity","PO:0001002 - fruit development stage ","Os04g0115500","LOC_Os04g02510.1",{"$nulls":6},"ALDH2A","OsALDH2a, ALDH2a, Aldh2a, OsSTA73, OsALDH2B5, ALDH2B5","ALDEHYDE DEHYDROGENASE 2A","aldehyde dehydrogenase 2a, Aldehyde dehydrogenase 2B5",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009751 - response to salicylic acid stimulus, GO:0005739 - mitochondrion, GO:0030912 - response to deep water, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, GO:0009635 - response to herbicide, GO:0009629 - response to gravity, GO:0009415 - response to water, GO:0009413 - response to flooding","TO:0002693 - gravity response trait, TO:0000058 - herbicide sensitivity, TO:0000286 - submergence sensitivity","PO:0009066 - anther ","Os02g0730000","LOC_Os02g49720.1, LOC_Os02g49720.2, LOC_Os02g49720.3, LOC_Os02g49720.6, LOC_Os02g49720.7",null,"Os03g0411800","Os03g0109600",0.9992018,0]
[{"$nulls":24},"Os05g0586600","Os03g0126000","Os03g0126000",-1.4519099,0,null,"Os05g0389000",3.2207673,"Os03g0810100",-1.1375446,{"$nulls":29},"_","OsAPC10","_",null,null," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA16","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0548000","LOC_Os01g36740.1, LOC_Os01g36760.1",{"$nulls":6},"GCS1","OsGCS1, OsHAP2(GCS1), OsHAP2, HAP2","GENERATIVE CELL SPECIFIC1","generative cell-specific protein 1, HAPLESS2",5," Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0008289 - lipid binding, GO:0009566 - fertilization, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0005789 - endoplasmic reticulum membrane, GO:0010581 - regulation of starch biosynthetic process","TO:0000231 - endospermless, TO:0000333 - sugar content, TO:0000696 - starch content, TO:0000328 - sucrose content, TO:0000189 - embryoless","PO:0025121 - pollen sperm cell ","Os05g0269500","LOC_Os05g18730.1",{"$nulls":6},"BAR","bar","BIALAPHOS RESISTANCE","bialaphos resistance",null," Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide","TO:0000058 - herbicide sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os02g0121300","Os05g0275600",0.977581,0]
[{"$nulls":24},"Os07g0669100","Os05g0277000","Os05g0277000",-1.4617229,0,null,"Os07g0560700",3.2206993,"Os03g0293700",-1.1373034,{"$nulls":29},"CYP76M7","OsCYP76M7, CYP76M10, OsCYP76M10","P-450 76M7","Cytochrome P450 76M7",2," Biochemical character,  Vegetative organ - Culm","GO:0016021 - integral to membrane, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding, GO:0009055 - electron carrier activity","TO:0002675 - gibberellic acid content, TO:0000207 - plant height",null,"Os02g0569900","LOC_Os02g36110.1",{"$nulls":7},"_","OsSTA17","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0583700","LOC_Os01g40150.1",{"$nulls":6},"_",null,"GCS1-LIKE","OsGCS1-like, generative cell-specific protein 1-like",9," Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0010581 - regulation of starch biosynthetic process, GO:0005789 - endoplasmic reticulum membrane, GO:0005887 - integral to plasma membrane, GO:0008289 - lipid binding, GO:0048235 - pollen sperm cell differentiation, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0009566 - fertilization, GO:0005783 - endoplasmic reticulum","TO:0000696 - starch content, TO:0000189 - embryoless, TO:0000231 - endospermless","PO:0025121 - pollen sperm cell ","Os09g0525700","LOC_Os09g35720.1",{"$nulls":6},"BLM","blm (=bl2)","BLAST LESION MIMIC GENE","blast lesion mimic gene",null," Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0009266 - response to temperature stimulus, GO:0050832 - defense response to fungus, GO:0048571 - long-day photoperiodism, GO:0010941 - regulation of cell death, GO:0006952 - defense response, GO:0052319 - regulation of phytoalexin biosynthetic process","TO:0000432 - temperature response trait, TO:0000063 - mimic response, TO:0002670 - momilactone A content, TO:0000074 - blast disease","PO:0025034 - leaf ",{"$nulls":3},"Os03g0130400","Os02g0768600",0.9773137,0]
[{"$nulls":24},"Os05g0139100","Os01g0871500","Os01g0871500",-1.4770066,0,null,"Os02g0811800",3.2202778,"Os02g0769900",-1.1371251,{"$nulls":29},"BC14","BC14, OsNST1","BRITTLE CULM 14","brittle culm 14, Oryza sativa nucleotide sugar transport 1, nucleotide sugar transport 1, Nucleotide Sugar Transporter1",2," Vegetative organ - Culm","GO:0016021 - integral to membrane",null,null,"Os02g0614100","LOC_Os02g40030.1, LOC_Os02g40030.2",{"$nulls":7},"_","OsSTA18","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0586400","LOC_Os01g40400.1",{"$nulls":6},"PSKR14","OsPSKR14","PHYTOSULFOKINE RECEPTOR 14","Phytosulfokine Receptor 14",6," Seed","GO:0046777 - protein amino acid autophosphorylation, GO:0016021 - integral to membrane, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0005886 - plasma membrane","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0025034 - leaf , PO:0009009 - plant embryo ","Os06g0692600","LOC_Os06g47750.1",{"$nulls":6},"BPH17","Bph17","BROWN PLANTHOPPER RESISTANCE 17","brown planthopper resistance  17",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":4},"Os01g0691600","Os01g0503400",0.97483826,0]
[{"$nulls":24},"Os01g0144100","Os01g0142300","Os01g0142300",-1.5335928,0,null,"Os08g0546100",3.2197192,"Os02g0658100",-1.1371179,{"$nulls":29},"ARF6B","OsARF6b, OsARF25, ARF25","AUXIN RESPONSE FACTOR 6B","auxin response factor-6B, auxin response factor 6B, auxin response factor-25, auxin response factor 25",12," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0009926 - auxin polar transport, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress","TO:0000567 - tiller angle, TO:0002693 - gravity response trait, TO:0000734 - grain length, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000207 - plant height","PO:0020039 - leaf lamina , PO:0009005 - root , PO:0025034 - leaf ","Os12g0613700","LOC_Os12g41950.1",{"$nulls":7},"_","OsSTA22","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0603800","LOC_Os01g41930.1",{"$nulls":6},"CHZ1","OsChz1","Chaperone for H2A.Z-H2B 1","CHZ-domain protein 1",null," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0006325 - chromatin organization, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0048587 - regulation of short-day photoperiodism, flowering","TO:0000397 - grain size, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os11g0544600","LOC_Os11g34190.1",{"$nulls":6},"BPH18","Bph18(t)","BROWN PLANTHOPPER RESISTANCE 18","brown planthopper resistance 18",12," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":4},"Os01g0847600","Os04g0479100",0.9717288,0]
[{"$nulls":24},"Os01g0621300","Os02g0651500","Os02g0651500",-1.5615706,0,null,"Os01g0114200",3.2181149,"Os06g0354700",-1.1361288,{"$nulls":29},"SD9","sd9(t), sd9, sd(t)*","SEMIDWARF 9","Ginbozu, Gimbozu, semidwarf-9",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000207 - plant height, TO:0000576 - stem length","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA23","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os01g41970",{"$nulls":6},"FLO18","OsFLO18","FLOURY ENDOSPERM 18","floury endosperm 18",7," Seed - Morphological traits - Endosperm","GO:0005774 - vacuolar membrane, GO:0005739 - mitochondrion, GO:0000966 - RNA 5'-end processing, GO:0006397 - mRNA processing, GO:0009960 - endosperm development, GO:0032981 - mitochondrial respiratory chain complex I assembly",null,"PO:0007633 - endosperm development stage ","Os07g0688100","LOC_Os07g48850.2, LOC_Os07g48850.1",{"$nulls":6},"BPH19","bph19(t)","BROWN PLANTHOPPER RESISTANCE 19","brown planthopper resistance 19",3," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance",{"$nulls":4},"Os10g0405600","Os05g0445100",0.96103925,0]
[{"$nulls":24},"Os01g0875500","Os05g0453300","Os05g0453300",-1.562294,0,null,"Os01g0757600",3.2178485,"Os01g0239100",-1.1356636,{"$nulls":29},"SD10","sd10(t)*, sd10(t), sd10","SEMIDWARF 10","semidwarf-10(Kinmaze), semidwarf-10",null," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000576 - stem length, TO:0000207 - plant height","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA24","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0604900","LOC_Os01g42024.1",{"$nulls":6},"DNL4","DNL-4, OsDNL-4, OsDNL4","DWARF AND NARROW LEAF 4","dwarf and narrow leaf 4",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape","GO:0016301 - kinase activity","TO:0000040 - panicle length, TO:0000206 - leaf angle, TO:0000207 - plant height, TO:0000370 - leaf width",null,"Os01g0105900","LOC_Os01g01620.1",{"$nulls":6},"CDC2-1","cdc2Os-1, CDC2Os-1, CDKA-1, CDKA;1, Orysa;CDKA;1, OsCDKA;1, cdc2Os1, Rcdc2-1, OsCDKA1, CDKA1","CELL DIVISION CONTROL PROTEIN 2 HOMOLOG 1","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1",3," Biochemical character,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0007126 - meiosis, GO:0004693 - cyclin-dependent protein kinase activity, GO:0009733 - response to auxin stimulus, GO:0048830 - adventitious root development, GO:0046685 - response to arsenic, GO:0008353 - RNA polymerase II carboxy-terminal domain kinase activity, GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity","TO:0000163 - auxin sensitivity, TO:0000031 - silicon sensitivity, TO:0000350 - cms-hl type","PO:0020094 - plant egg cell ","Os03g0118400","LOC_Os03g02680.1, LOC_Os03g02680.2, LOC_Os03g02680.3",null,"Os01g0926300","Os01g0234900",0.95995265,0]
[{"$nulls":24},"Os03g0638200","Os03g0807900","Os03g0807900",-1.6401609,0,null,"Os03g0257500",3.2139568,"Os08g0359500",-1.1354675,{"$nulls":29},"SV","SV(t)*","SEED VIABILITY","Seed viability",null," Vegetative organ - Culm","GO:0009845 - seed germination","TO:0000345 - seed viability","PO:0009010 - seed ",{"$nulls":9},"_","OsSTA25","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0651200","LOC_Os01g46250.1",{"$nulls":6},"_",null,"BERBERINE BRIDGE ENZYME-LIKE 13","berberine bridge enzyme-like 13, BBE-like enzyme 13",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0034059 - response to anoxia, GO:0016491 - oxidoreductase activity",null,"PO:0007057 - 0 seed germination stage ","Os06g0548200","LOC_Os06g35560.1",{"$nulls":6},"GLR3.1","OsGLR3.2, GLR3.2, OsGLR3.1","GLUTAMATE RECEPTOR 3.1","Glutamate receptor 3.1, Ligand-gated ion channel 3.1, Glutamate receptor homolog 3.2, GLUTAMATE RECEPTOR-LIKE 3.1",4," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0004970 - ionotropic glutamate receptor activity, GO:0006950 - response to stress, GO:0030288 - outer membrane-bounded periplasmic space, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0006811 - ion transport, GO:0009651 - response to salt stress, GO:0005234 - extracellular-glutamate-gated ion channel activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000306 - root thickness, TO:0000276 - drought tolerance",null,"Os04g0585200","LOC_Os04g49570.1, LOC_Os04g49570.2",null,"Os04g0495800","Os01g0182700",0.95771533,0]
[{"$nulls":24},"Os04g0507700","Os07g0147900","Os07g0147900",-1.6598167,0,null,"Os01g0703300",3.2132957,"Os08g0137000",-1.1341038,{"$nulls":29},"TA1","Ta1*, Ta1","TILLER AND LEAF ANGLES 1","Tiller and leaf angles-1, Tiller and leaf angles",9," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000206 - leaf angle",{"$nulls":10},"_","OsSTA26","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0660500","LOC_Os01g47100.1",{"$nulls":6},"_",null,"_","glucan endo-1, 3- beta-glucosidase precursor",8," Seed - Physiological traits","GO:0005985 - sucrose metabolic process, GO:0005982 - starch metabolic process","TO:0000266 - chalky endosperm",{"$nulls":9},"GN1A","Gn1a, OsCKX2, CKX2, ckx2, Gn1a/OsCKX2, Os CKX2, CKX2/Gn1a","GRAIN NUMBER 1A","Cytokinin oxidase/dehydrogenase 2, grain number 1a, cytokinin oxidase 2, Grain number 1a/Cytokinin oxidase 2, Grain number 1 a",1," Biochemical character,  Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0032940 - secretion by cell, GO:0022900 - electron transport chain, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0019139 - cytokinin dehydrogenase activity, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress","TO:0000495 - chlorophyll content, TO:0000128 - harvest index, TO:0000316 - photosynthetic ability, TO:0002759 - grain number, TO:0000382 - 1000-seed weight, TO:0000167 - cytokinin sensitivity, TO:0002660 - cytokinin content, TO:0000296 - vegetative vigor, TO:0000440 - grain number per plant, TO:0000136 - relative water content, TO:0000152 - panicle number, TO:0000496 - carotenoid content, TO:0000621 - inflorescence development trait, TO:0000052 - primary branching of inflorescence, TO:0000456 - spikelet number, TO:0000142 - secondary branching of inflorescence, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000467 - cell membrane stability, TO:0000050 - inflorescence branching","PO:0000230 - inflorescence meristem , PO:0001083 - inflorescence development stage ","Os01g0197700 ","LOC_Os01g10110.1",null,"Os07g0182100","Os05g0333500",0.9544609,0]
[{"$nulls":24},"Os02g0669000","Os06g0146800","Os06g0146800",-1.6895334,0,null,"Os07g0689800",3.2130077,"Os02g0185300",-1.1336023,{"$nulls":29},"TS3(T)*","ts3(t)*, ts3","TWISTED STEM-3","twisted stem-3",1," Vegetative organ - Culm","GO:0007275 - multicellular organismal development","TO:0000427 - culm angle","PO:0009047 - stem ",{"$nulls":9},"_","OsSTA27","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0677000","LOC_Os01g48540.1",{"$nulls":6},"LARGE2","OsLARGE2, OsUPL2, UPL2","UBIQUITIN PROTEIN LIGASE 2","Ubiquitin Protein Ligase 2",12," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0005737 - cytoplasm, GO:0000209 - protein polyubiquitination, GO:0016567 - protein ubiquitination, GO:0010073 - meristem maintenance, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0045732 - positive regulation of protein catabolic process","TO:0000339 - stem thickness, TO:0002759 - grain number, TO:0006032 - panicle size, TO:0000370 - leaf width","PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0428600","LOC_Os12g24080.1",{"$nulls":6},"GRX","grx, OsGRX, OsGRX14, OsGrx9, OsGrxC2;2, GrxC2;2, OsGrxC2.2, GrxC2.2","GLUTAREDOXIN","glutaredoxin, glutaredoxin 14, CPYC-type Glutaredoxin 2.2",4," Biochemical character,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Stress tolerance","GO:0022900 - electron transport chain, GO:0045454 - cell redox homeostasis, GO:0016209 - antioxidant activity, GO:0006810 - transport, GO:0005737 - cytoplasm, GO:0008794 - arsenate reductase (glutaredoxin) activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0045995 - regulation of embryonic development, GO:0009055 - electron carrier activity, GO:0006979 - response to oxidative stress","TO:0000189 - embryoless, TO:0002657 - oxidative stress, TO:0000181 - seed weight, TO:0000064 - embryo related trait, TO:0000605 - hydrogen peroxide content","PO:0004506 - developing seed stage , PO:0009009 - plant embryo , PO:0005360 - aleurone layer , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0009010 - seed , PO:0020033 - coleoptile ","Os04g0508300","LOC_Os04g42930.2, LOC_Os04g42930.1",null,"Os10g0498700","Os03g0132800",-0.9512622,0]
[{"$nulls":24},"Os09g0411650","Os07g0637300","Os07g0637300",-1.6983052,0,null,"Os08g0326000",3.2126343,"Os12g0115150",-1.1325774,{"$nulls":29},"APO1","apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393, Pbl6/APO1, Pbl6, OsPbl6","ABERRANT PANICLE ORGANIZATION 1","aberrant panicle organization 1, aberrant panicle organization-1, STRONG CULM 2, STRONG CULM2, F-box protein 321, PRIMARY BRANCH LENGTH6, PRIMARY BRANCH LENGTH 6",6," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030154 - cell differentiation","TO:0000068 - lodging incidence, TO:0000050 - inflorescence branching, TO:0002759 - grain number, TO:0000339 - stem thickness, TO:0002639 - shoot branching, TO:0000040 - panicle length, TO:0000641 - primary branch length, TO:0000456 - spikelet number, TO:0000052 - primary branching of inflorescence, TO:0000051 - stem strength, TO:0000499 - flower anatomy and morphology trait, TO:0000089 - panicle type, TO:0000371 - yield trait","PO:0009082 - spikelet floret , PO:0009049 - inflorescence ","Os06g0665400","LOC_Os06g45460.1",{"$nulls":7},"_","OsSTA30","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0715400","LOC_Os01g51754.1, LOC_Os01g51754.2, LOC_Os01g51754.3, LOC_Os01g51754.4",{"$nulls":6},"CLSY1","OsCLSY1","CLASSY 1",null,7," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Other","GO:0030912 - response to deep water, GO:0034059 - response to anoxia, GO:0009413 - response to flooding, GO:0009845 - seed germination, GO:0006306 - DNA methylation, GO:0005524 - ATP binding","TO:0000114 - flooding related trait, TO:0000524 - submergence tolerance","PO:0007057 - 0 seed germination stage ","Os07g0692600","LOC_Os07g49210.1",{"$nulls":6},"GS2","OsGS2, GLN2, OsGLN2, RGS31, OsRGS31","GLUTAMINE SYNTHETASE 2","\\Glutamine synthetase, chloroplastic\\\", plastidic/chloroplastic glutamine synthase, glutamine synthetase 2, \\\"Glutamate:ammonia ligase delta, chloroplast\\\", chloroplastic gluthamine synthetase 2\"",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009570 - chloroplast stroma, GO:0005739 - mitochondrion, GO:0048046 - apoplast, GO:0009941 - chloroplast envelope, GO:0009651 - response to salt stress, GO:0009536 - plastid, GO:0046686 - response to cadmium ion, GO:0009399 - nitrogen fixation, GO:0004356 - glutamate-ammonia ligase activity, GO:0009609 - response to symbiotic bacterium, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009635 - response to herbicide, GO:0010446 - response to alkalinity, GO:0005524 - ATP binding, GO:0022626 - cytosolic ribosome, GO:0009535 - chloroplast thylakoid membrane, GO:0006542 - glutamine biosynthetic process","TO:0006002 - proline content, TO:0000276 - drought tolerance, TO:0000481 - alkali sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0005007 - glufosinate sensitivity",null,"Os04g0659100","LOC_Os04g56400.1, LOC_Os04g56400.4, LOC_Os04g56400.3",null,"Os09g0109800","Os07g0204900",-0.9518482,0]
[{"$nulls":24},"Os04g0107300","Os10g0532300","Os10g0532300",-1.7106878,0,null,"Os11g0143200",3.212064,"Os07g0573600",-1.1324245,{"$nulls":29},"EUI2","eui2","ELONGATED UPPERMOST INTERNODE 2","elongated uppermost internode 2, elongated uppermost internode-2",10," Vegetative organ - Culm","GO:0009826 - unidimensional cell growth","TO:0000145 - internode length","PO:0009047 - stem , PO:0020142 - stem internode ",{"$nulls":9},"_","OsSTA31","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0720800","LOC_Os01g52270.1",{"$nulls":6},"_",null,"_","Flavin-containing monooxygenase",10," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0050660 - FAD binding, GO:0009845 - seed germination, GO:0009413 - response to flooding, GO:0030912 - response to deep water, GO:0050661 - NADP or NADPH binding, GO:0004499 - flavin-containing monooxygenase activity","TO:0000114 - flooding related trait, TO:0000524 - submergence tolerance","PO:0007057 - 0 seed germination stage ","Os10g0553800","LOC_Os10g40570.1",{"$nulls":6},"JIOSPR10","JIOsPR10, OsPR10, PR10, OsJiPR10, JiPR10","JASMONATE INDUCIBLE PATHOGENESIS-RELATED CLASS 10 PROTEIN","jasmonate inducible pathogenesis-related class 10 protein",3," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus, GO:0009607 - response to biotic stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0006952 - defense response, GO:0009416 - response to light stimulus, GO:0051607 - defense response to virus, GO:0006950 - response to stress","TO:0000172 - jasmonic acid sensitivity, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root ","Os03g0300400","LOC_Os03g18850.1",null,"Os01g0135900","Os01g0916600",-0.9567382,0]
[{"$nulls":24},"Os05g0230700","Os10g0477200","Os10g0477200",-1.7130603,0,null,"Os05g0155400",3.2103226,"Os04g0372201",-1.1316675,{"$nulls":29},"LK3","lk3(t), lk3(t)*, SG3, GS3, SG3-GS3, OsGW3, OsGS3, RGG3/GS3/Mi/OsGGC1, RGG3, Mi, OsGGC1, GGC1, OsSYL3, SYL3","LONG KERNEL 3","long kernel 3, long kernel-3, grain size, grain length and weight protein, GRAIN SIZE 3, G gamma subunit GS3, Heterotrimeric G Protein gamma3 Subunit, style length 3",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048573 - photoperiodism, flowering, GO:0007275 - multicellular organismal development, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000592 - 1000-dehulled grain weight, TO:0000382 - 1000-seed weight, TO:0000402 - grain width, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0006001 - salt tolerance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002731 - grain length to width ratio, TO:0000137 - days to heading, TO:0000396 - grain yield, TO:0000146 - seed length, TO:0000391 - seed size, TO:0000162 - seed quality, TO:0002730 - grain shape, TO:0000040 - panicle length, TO:0000734 - grain length","PO:0009049 - inflorescence , PO:0009010 - seed ","Os03g0407400",{"$nulls":8},"_","OsSTA32","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0749000","LOC_Os01g54520.1, LOC_Os01g54520.2",{"$nulls":6},"_",null,"_","Unknown gene",11," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009845 - seed germination, GO:0009413 - response to flooding, GO:0034059 - response to anoxia, GO:0030912 - response to deep water","TO:0000524 - submergence tolerance, TO:0000114 - flooding related trait","PO:0007057 - 0 seed germination stage ","Os11g0698567",{"$nulls":7},"LSI1","lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1, lsi(t), OsNIP2.1/OsLsi1/OsSIIT1, OsNIP2.1, NIP2.1","LOW SILICON RICE 1","low silicon rice, Low silicon rice 1, Silicon transporter LSI1, Aquaporin NIP2-1, NOD26-like intrinsic protein 2-1, Silicon transporter LSI1, Low silicon protein 1, NOD26 LIKE INTRINSIC PROTEIN 2;1, low Si uptake, Low Si 1",2," Vegetative organ - Root,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0055085 - transmembrane transport, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0009733 - response to auxin stimulus, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0015115 - silicate transmembrane transporter activity, GO:0009651 - response to salt stress, GO:0048830 - adventitious root development, GO:0015104 - antimonite transmembrane transporter activity, GO:0015708 - silicate transport, GO:0048226 - Casparian strip, GO:0016021 - integral to membrane, GO:0009409 - response to cold, GO:0010035 - response to inorganic substance, GO:0005215 - transporter activity, GO:0042594 - response to starvation, GO:0016020 - membrane","TO:0000396 - grain yield, TO:0000021 - copper sensitivity, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000031 - silicon sensitivity, TO:0000261 - insect damage resistance, TO:0000007 - sulfur sensitivity, TO:0000201 - panicle color","PO:0009005 - root , PO:0005059 - root endodermis , PO:0005772 - exodermis , PO:0020121 - lateral root , PO:0020127 - primary root ","Os02g0745100","LOC_Os02g51110.1",null,"Os04g0542200","Os12g0612400",-0.9571989,0]
[{"$nulls":24},"Os02g0833900","Os08g0174300","Os08g0174300",-1.7343868,0,null,"Os02g0733300",3.2091076,"Os03g0244700",-1.1313387,{"$nulls":29},"SUT2","OsSUT2(t), SUT2M, OsSUT2, OsSUT2M, OsSUT5","SUCROSE TRANSPORTER 2","sucrose transporter2(t), Sucrose transport protein 2, Sucrose permease 2 ; Sucrose-proton symporter 2, Sucrose transporter 2, Sucrose transporter-2, SUC4-like protein, sucrose transporter 2M",12," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0002215 - defense response to nematode, GO:0008519 - ammonium transmembrane transporter activity, GO:0005887 - integral to plasma membrane, GO:0015770 - sucrose transport, GO:0055085 - transmembrane transport, GO:0015293 - symporter activity, GO:0008515 - sucrose transmembrane transporter activity, GO:0016020 - membrane","TO:0000384 - nematode damage resistance, TO:0000333 - sugar content, TO:0000207 - plant height, TO:0000401 - plant growth hormone sensitivity","PO:0000003 - whole plant ","Os12g0641400","LOC_Os12g44380.1, LOC_Os12g44380.2, LOC_Os12g44380.3",{"$nulls":7},"_","OsSTA33","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0764200","LOC_Os01g55850.1",{"$nulls":6},"LOWAC1","LowAC1, OsLowAC1","LOW AMYLOSE CONTENT 1","low amylose content 1",2," Seed - Physiological traits - Storage substances,  Other","GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0010581 - regulation of starch biosynthetic process, GO:0046872 - metal ion binding, GO:0003723 - RNA binding, GO:0005634 - nucleus","TO:0000105 - dull endosperm, TO:0000196 - amylose content",null,"Os02g0167500","LOC_Os02g07070.3, LOC_Os02g07070.2, LOC_Os02g07070.1",{"$nulls":6},"LTP1","Ltp1","LIPID TRANSFER PROTEIN 1","lipid transfer protein",null," Tolerance and resistance - Disease resistance","GO:0008289 - lipid binding, GO:0006952 - defense response","TO:0000164 - stress trait, TO:0000074 - blast disease","PO:0000003 - whole plant , PO:0009011 - plant structure , PO:0009025 - vascular leaf ",{"$nulls":3},"Os07g0222300","Os01g0771200",-0.9586878,0]
[{"$nulls":24},"Os12g0582000","Os06g0239200","Os06g0239200",-1.7696333,0,null,"Os03g0661300",3.206844,"Os01g0565900",-1.1313366,{"$nulls":29},"qTA-2","qTA-2","tiller angle (QTL)-2","tiller angle (QTL)-2",2," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA34","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0772400","LOC_Os01g56560.1",{"$nulls":6},"FSE5","OsFSE5, OsPORR1, PORR1","FLOURY SHRUNKEN ENDOSPERM 5","PORR Domain-Containing Protein 1, floury shrunken endosperm 5",9," Seed - Morphological traits,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0006979 - response to oxidative stress, GO:0032981 - mitochondrial respiratory chain complex I assembly, GO:0009790 - embryonic development, GO:0009845 - seed germination, GO:0048316 - seed development, GO:0005739 - mitochondrion, GO:0000963 - mitochondrial RNA processing, GO:0000373 - Group II intron splicing, GO:0070584 - mitochondrion morphogenesis","TO:0000620 - embryo development trait, TO:0001026 - respiration rate, TO:0000639 - seed fertility, TO:0000100 - shrunken endosperm, TO:0000104 - floury endosperm, TO:0000280 - seedling vigor, TO:0000430 - germination rate","PO:0009010 - seed , PO:0020104 - leaf sheath , PO:0007631 - plant embryo stage , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0007057 - 0 seed germination stage , PO:0001170 - seed development stage ","Os09g0473400","LOC_Os09g29760.1",{"$nulls":6},"ONAC300","ONAC077, NAC77, NAC300, ONAC132, NAC132, DLN250, OsDLN250","NAC DOMAIN-CONTAINING PROTEIN 300","NAC domain-containing protein 30, NAC domain-containing protein 77, NAC domain-containing protein 132, DLN repressor 250, DLN motif protein 250",12," Tolerance and resistance - Disease resistance,  Other","GO:0051607 - defense response to virus, GO:0045449 - regulation of transcription, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000386 - rice ragged stunt virus resistance",null,"Os12g0123800","LOC_Os12g03050.1",null,"Os08g0390000","Os08g0559200",-0.9608739,0]
[{"$nulls":24},"Os11g0701000","Os08g0109300","Os08g0109300",-1.7711678,0,null,"Os07g0445600",3.2060175,"Os07g0509200",-1.1306559,{"$nulls":29},"qTA-1","qTA-1","tiller angle (QTL)-1","tiller angle (QTL)-1",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA35","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0774500","LOC_Os01g56764.1",{"$nulls":6},"GW5L","OsGW5L","GRAIN WIDTH 5-LIKE","Grain Width 5-Like, GW5-Like",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009742 - brassinosteroid mediated signaling, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000734 - grain length",null,"Os01g0190500","LOC_Os01g09470.1",{"$nulls":6},"ABA1","OsABA1, Zep1, OsAba1, Aba2, OsAba2, OsZep1, Zep, OsZep, Aba1, OsABA2, Osaba1, OsZEP-1, OsZEP, OSZEP1, ZEP1, ZEP","ABA DEFICIENT 1","Zeaxanthin epoxidase 1, zeaxanthin epoxidase, abscisic acid-deficient 1",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Coloration,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004497 - monooxygenase activity, GO:0009688 - abscisic acid biosynthetic process, GO:0051607 - defense response to virus, GO:0042742 - defense response to bacterium, GO:0016491 - oxidoreductase activity, GO:0007623 - circadian rhythm, GO:0022900 - electron transport chain, GO:0006725 - cellular aromatic compound metabolic process, GO:0009738 - abscisic acid mediated signaling, GO:0009408 - response to heat, GO:0009266 - response to temperature stimulus, GO:0009540 - zeaxanthin epoxidase activity, GO:0009536 - plastid, GO:0008152 - metabolic process, GO:0010378 - temperature compensation of the circadian clock, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0016123 - xanthophyll biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010118 - stomatal movement","TO:0000135 - leaf length, TO:0000203 - bacterial leaf streak disease resistance, TO:0000522 - stomatal conductance, TO:0000148 - viral disease resistance, TO:0002667 - abscisic acid content, TO:0000131 - leaf water potential, TO:0000326 - leaf color, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait, TO:0000020 - black streak dwarf virus resistance, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000478 - abscisic acid concentration, TO:0000175 - bacterial blight disease resistance, TO:0000619 - vivipary","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os04g0448900","LOC_Os04g37619.1, LOC_Os04g37619.2",null,"Os07g0188800","Os07g0523300",-0.96320534,0]
[{"$nulls":24},"Os11g0707100","Os09g0466400","Os09g0466400",-1.799709,0,null,"Os04g0684100",3.2054586,"Os02g0178400",-1.1304274,{"$nulls":29},"qTA-5","qTA-5","tiller angle (QTL)-5","tiller angle (QTL)-5",5," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA36","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0848700","LOC_Os01g62950.1",{"$nulls":6},"KEAP1","OsKEAP1","KELCH-LIKE ECH-ASSOCIATED PROTEIN 1","Kelch-like ECH-associated protein 1",1," Seed - Physiological traits - Dormancy","GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0009845 - seed germination, GO:0045454 - cell redox homeostasis, GO:0051775 - response to redox state","TO:0000357 - growth and development trait, TO:0000615 - abscisic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os01g0165200","LOC_Os01g07140.2, LOC_Os01g07140.1",{"$nulls":6},"ALS","OsALS, AHAS","ACETOLACTATE SYNTHASE","acetolactate synthase, acetohydroxyacid synthase",2," Biochemical character,  Tolerance and resistance","GO:0030976 - thiamin pyrophosphate binding, GO:0003984 - acetolactate synthase activity, GO:0000287 - magnesium ion binding, GO:0050660 - FAD binding, GO:0009635 - response to herbicide, GO:0009507 - chloroplast, GO:0009099 - valine biosynthetic process, GO:0009097 - isoleucine biosynthetic process",null,null,"Os02g0510200","LOC_Os02g30630.1, LOC_Os02g30630.2",null,"Os05g0594800","Os03g0757500",-0.96391296,0]
[{"$nulls":24},"Os06g0681600","Os10g0205700","Os10g0205700",-1.8109573,0,null,"Os05g0551500",3.2050152,"Os03g0265700",-1.1299225,{"$nulls":29},"qTA-8","qTA-8","tiller angle (QTL)-8","tiller angle (QTL)-8",8," Vegetative organ - Culm",{"$nulls":12},"ANTH2","OsSTA37, OsANTH2","ANTH DOMAIN-CONTAINING PROTEIN 2","ANTH domain-containing protein 2, AP180 N-terminal homology domain-containing protein 2",1," Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0005545 - phosphatidylinositol binding, GO:0009555 - pollen development, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0030276 - clathrin binding, GO:0000149 - SNARE binding, GO:0048268 - clathrin coat assembly, GO:0006900 - membrane budding, GO:0005794 - Golgi apparatus, GO:0030136 - clathrin-coated vesicle, GO:0006897 - endocytosis, GO:0005905 - coated pit, GO:0009860 - pollen tube growth, GO:0032050 - clathrin heavy chain binding, GO:0005886 - plasma membrane",null,"PO:0001007 - pollen development stage , PO:0009066 - anther ","Os01g0881100","LOC_Os01g65860.1",{"$nulls":6},"MATE3","OsMATE3","MULTIDRUG AND TOXIC COMPOUND EXTRUSION 3","multidrug and toxic compound extrusion 3",1," Biochemical character,  Coloration - Anthocyanin,  Seed - Morphological traits","GO:0042910 - xenobiotic transporter activity, GO:0015297 - antiporter activity, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0022857 - transmembrane transporter activity","TO:0000071 - anthocyanin content",null,"Os01g0766000","LOC_Os01g56050.1",{"$nulls":6},"ARF1","OsARF1, arf1, OsARF23, ARF23","AUXIN RESPONSE FACTOR 1","auxin response factor-1, auxin response factor 1, auxin response factor-23, auxin response factor 23",11," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0009734 - auxin mediated signaling pathway, GO:0046983 - protein dimerization activity, GO:0009753 - response to jasmonic acid stimulus, GO:0042594 - response to starvation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0005634 - nucleus","TO:0000401 - plant growth hormone sensitivity, TO:0000172 - jasmonic acid sensitivity","PO:0000003 - whole plant ","Os11g0523800","LOC_Os11g32110.4, LOC_Os11g32110.3, LOC_Os11g32110.2, LOC_Os11g32110.1",null,"Os09g0509100","Os04g0663300",-0.96621513,0]
[{"$nulls":24},"Os07g0510400","Os03g0832200","Os03g0832200",-1.8127953,0,null,"Os01g0938100",3.2042682,"Os07g0114000",-1.1291896,{"$nulls":29},"HD2","Hd2(t), Hd2, qHD2(t), OsPRR37, Os-PRR37, PRR37, Prr4, OsPRR4, DTH7, OsCCT28, CCT28, Ghd7.1, PRR37/Hd2, EH7-2, EH7-2/Hd2, Hd2/PRR37, PRR37-1a, PRR37-1b, PRR37-1c, PRR37-2a, PRR37- 2, HD7.2","Heading date 2","Heading date (QTL)-2(t), Heading date 2, PSEUDO-RESPONSE REGULATOR 37, PSEUDO RESPONSE REGULATOR 37, pseudo-response regulator 4, Days to heading 7, Days to heading on chromosome 7, CCT domain-containing gene 28, CCT (CO, CO-LIKE and TOC1) domain protein 28, CCT domain protein 28, \\grain number, plant height and heading date 7.1\\\", Early heading7-2, Heading date 7.2\"",7," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048511 - rhythmic process, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0000156 - two-component response regulator activity, GO:0007623 - circadian rhythm, GO:0048573 - photoperiodism, flowering, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000229 - photoperiod sensitivity, TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000137 - days to heading",null,"Os07g0695100","LOC_Os07g49460.1, LOC_Os07g49460.4, LOC_Os07g49460.3, LOC_Os07g49460.2",{"$nulls":7},"_","OsSTA38","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0886600","LOC_Os01g66330.1",{"$nulls":6},"BE2","OsBE2, TGW12a, OsTGW12a","_","thousand-grain weight 12a",12," Biochemical character,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances","GO:0016021 - integral to membrane, GO:0022857 - transmembrane transporter activity, GO:0015297 - antiporter activity, GO:0016020 - membrane, GO:0042910 - xenobiotic transporter activity","TO:0000266 - chalky endosperm, TO:0000592 - 1000-dehulled grain weight, TO:0000590 - grain weight",null,"Os12g0552600","LOC_Os12g36660.1",{"$nulls":6},"BISAMT1","OsBISAMT1","BENZOTHIADIAZOLE-INDUCED SAMT1","benzothiadiazole-induced SAMT1, benzothiadiazole-induced S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase 1, BTH-induced S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase 1",11," Tolerance and resistance - Stress tolerance","GO:0008168 - methyltransferase activity, GO:0032259 - methylation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity",null,null,"Os11g0256900","LOC_Os11g15040.5, LOC_Os11g15040.4, LOC_Os11g15040.3, LOC_Os11g15040.2, LOC_Os11g15040.1",null,"Os09g0567400","Os04g0650000",-0.96720123,0]
[{"$nulls":24},"Os05g0550300","Os01g0164800","Os01g0164800",-1.974969,0,null,"Os05g0589700",3.202921,"Os08g0280200",-1.12704,{"$nulls":29},"qPH-3-1(t)","qPH-3-1(t)","plant height (QTL)-3-1(t)","plant height (QTL)-3-1(t)",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA39","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0891000","LOC_Os01g66700.1",{"$nulls":6},"SSIV3","SSIV-3, OsSSIV-3","SOLUBLE STARCH SYNTHASE IV3","SOLUBLE STARCH SYNTHASE IV-3, glycogen synthase 1",2," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0019252 - starch biosynthetic process, GO:0009507 - chloroplast, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0009960 - endosperm development, GO:0016021 - integral to membrane",null,"PO:0007633 - endosperm development stage , PO:0009089 - endosperm ","Os02g0807100","LOC_Os02g56334.1, LOC_Os02g56320.1",{"$nulls":6},"BLE2","OsBLE2","BRASSINOLIDE ENHANCED GENE 2","brassinolide (BL)-enhanced gene 2, BLE2 protein",7," Tolerance and resistance - Stress tolerance","GO:0009741 - response to brassinosteroid stimulus",null,null,"Os07g0650600","LOC_Os07g45570.1",null,"Os07g0187300","Os03g0833200",-0.9680702,0]
[{"$nulls":24},"Os04g0445700","Os01g0164900","Os01g0164900",-1.830366,0,null,"Os02g0595700",3.2027285,"Os05g0417600",-1.1263614,{"$nulls":29},"qPH-4-1(t)","qPH-4-1(t)","plant height (QTL)-4-1(t)","plant height (QTL)-4-1(t)",4," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA40","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0892800","LOC_Os01g66860.2, LOC_Os01g66860.3, LOC_Os01g66860.4",{"$nulls":6},"ENL2","OsCTPS1, CTPS1","ENDOSPERMLESS 2","cytidine triphosphate synthase 1, endospermless 2",1," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0048364 - root development, GO:0048487 - beta-tubulin binding, GO:0043014 - alpha-tubulin binding, GO:0009960 - endosperm development, GO:0019856 - pyrimidine base biosynthetic process, GO:0006541 - glutamine metabolic process, GO:0006241 - CTP biosynthetic process, GO:0042802 - identical protein binding, GO:0003883 - CTP synthase activity, GO:0005524 - ATP binding, GO:0010342 - cellularization of endosperm, GO:0051785 - positive regulation of nuclear division, GO:0000226 - microtubule cytoskeleton organization, GO:0008017 - microtubule binding, GO:0015631 - tubulin binding","TO:0000181 - seed weight, TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000656 - root development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000397 - grain size, TO:0002692 - root meristem development","PO:0020020 - nucellus , PO:0007631 - plant embryo stage , PO:0001170 - seed development stage , PO:0009084 - pericarp , PO:0020148 - shoot apical meristem , PO:0009049 - inflorescence , PO:0025074 - embryo sac , PO:0009009 - plant embryo , PO:0007520 - root development stage , PO:0007633 - endosperm development stage , PO:0009089 - endosperm ","Os01g0616900","LOC_Os01g43020.1",{"$nulls":6},"CBL1","OsCBL1, Os-CBL1","CALCINEURIN B-LIKE PROTEIN 1","Calcineurin B-like protein 1, Calcineurin B-Like protein1",10," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048527 - lateral root development, GO:0005509 - calcium ion binding, GO:0031225 - anchored to membrane, GO:0009684 - indoleacetic acid biosynthetic process, GO:0010600 - regulation of auxin biosynthetic process, GO:0005773 - vacuole","TO:0001012 - lateral root length, TO:0000514 - potassium uptake, TO:0000227 - root length, TO:0000571 - shoot fresh weight, TO:0000578 - root fresh weight",null,"Os10g0564800","LOC_Os10g41510.1",null,"Os03g0302000","Os03g0701700",-0.9710056,0]
[{"$nulls":24},"Os04g0631200","Os12g0190000","Os12g0190000",-1.8507172,0,null,"Os01g0703000",3.2016866,"Os05g0417500",-1.1263614,{"$nulls":29},"qPH-11-1(t)","qPH-11-1(t)","plant height (QTL)-11-1(t)","plant height (QTL)-11-1(t)",11," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA41, STA41","_",null,1," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000207 - plant height","PO:0009066 - anther ","Os01g0925600","LOC_Os01g70120.1, LOC_Os01g70120.2",{"$nulls":6},"IAGLU","OsIAGLU, UGT75F2, OsUGT75F2","INDOLE-3-ACETATE BETA-GLUCOSYLTRANSFERASE","Indole-3-acetate beta-glucosyltransferase, UDP-glucosyltransferase 75F2",1," Biochemical character,  Seed - Physiological traits,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0005737 - cytoplasm, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0009845 - seed germination","TO:0002667 - abscisic acid content, TO:0000163 - auxin sensitivity, TO:0000280 - seedling vigor, TO:0000227 - root length, TO:0000250 - vigor related trait, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0002672 - auxin content","PO:0009009 - plant embryo , PO:0007022 - seed imbibition stage , PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os11g0446700","LOC_Os11g25990.1",{"$nulls":6},"CBL10","OsCBL10","CALCINEURIN B-LIKE PROTEIN 10","Calcineurin B-like protein 10",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005509 - calcium ion binding","TO:0006001 - salt tolerance, TO:0000114 - flooding related trait, TO:0000276 - drought tolerance",null,"Os01g0711500","LOC_Os01g51420.1",null,"Os02g0760300","Os03g0366800",-0.97498304,0]
[{"$nulls":24},"Os08g0269700","Os03g0225200","Os03g0225200",-1.8526583,0,null,"Os05g0449200",3.1966286,"Os05g0435400",-1.1260818,{"$nulls":29},"qINE-1(QIne1)","qINE-1(QIne1)","internode elongation (QTL)-1","internode elongation (QTL)-1",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA43","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0936700","LOC_Os01g71040.1",{"$nulls":6},"PLB","OsPLB","PHOSPHOLIPASE B","phospholipase B",11," Biochemical character,  Seed - Physiological traits - Dormancy,  Character as QTL - Germination","GO:0010883 - regulation of lipid storage, GO:0006629 - lipid metabolic process, GO:0046470 - phosphatidylcholine metabolic process, GO:0009845 - seed germination","TO:0000604 - fat and essential oil content","PO:0007057 - 0 seed germination stage , PO:0009010 - seed ","Os11g0655800","LOC_Os11g43510.1",{"$nulls":6},"CBL3","OsCBL3","CALCINEURIN B-LIKE PROTEIN 3","Calcineurin B-like protein 3",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0022626 - cytosolic ribosome, GO:0005509 - calcium ion binding, GO:0005886 - plasma membrane, GO:0009705 - plant-type vacuole membrane, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os03g0626800","LOC_Os03g42840.1",null,"Os03g0190000","Os11g0145400",-0.9807844,0]
[{"$nulls":24},"Os04g0469800","Os12g0633600","Os12g0633600",-1.8722016,0,null,"Os10g0159800",3.1943836,"Os07g0291100",-1.1244589,{"$nulls":29},"qINE-4(QIne4)","qINE-4(QIne4)","internode elongation (QTL)-4","internode elongation (QTL)-4",4," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA44","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0946300","LOC_Os01g71800.1",{"$nulls":6},"POW1","OsPOW1","PUT ON WEIGHT 1","put on weight 1",7," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0003682 - chromatin binding, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0051302 - regulation of cell division, GO:0031936 - negative regulation of chromatin silencing, GO:0035098 - ESC/E(Z) complex, GO:0035102 - PRC1 complex, GO:0046872 - metal ion binding","TO:0000397 - grain size, TO:0000206 - leaf angle",null,"Os07g0175100","LOC_Os07g07880.1",{"$nulls":6},"CBL4","OsCBL4, SOS3, OsSOS3","CALCINEURIN B-LIKE PROTEIN 4","Calcineurin B-like protein 4, salt overly sensitive 3",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030007 - cellular potassium ion homeostasis, GO:0009651 - response to salt stress, GO:0005513 - detection of calcium ion, GO:0005886 - plasma membrane, GO:0031225 - anchored to membrane, GO:0005737 - cytoplasm, GO:0009414 - response to water deprivation, GO:0042539 - hypotonic salinity response, GO:0009409 - response to cold, GO:0005509 - calcium ion binding","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0009005 - root ","Os05g0534400","LOC_Os05g45810.1",null,"Os01g0149800","Os03g0329900",-0.98224515,0]
[{"$nulls":24},"Os06g0712700","Os06g0219500","Os06g0219500",-1.8824848,0,null,"Os03g0730500",3.1926033,"Os06g0188950",-1.1244283,{"$nulls":29},"qPH-1-1(t) (ph1)","qPH-1-1(t) (ph1)","plant height (QTL)-1-1(t)","plant height (QTL)-1-1(t)",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA45","_",null,1," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os01g0971600","LOC_Os01g74000.1",{"$nulls":6},"NBL3","OsNBL3","NATURAL BLIGHT LEAF 3 ","natural blight leaf 3",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0008219 - cell death, GO:0009628 - response to abiotic stimulus, GO:0009607 - response to biotic stimulus, GO:0007005 - mitochondrion organization, GO:0000365 - nuclear mRNA trans splicing, via spliceosome, GO:0045292 - nuclear mRNA cis splicing, via spliceosome, GO:0005739 - mitochondrion, GO:0003729 - mRNA binding, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009738 - abscisic acid mediated signaling, GO:0010150 - leaf senescence, GO:0070265 - necrotic cell death, GO:0010230 - alternative respiration","TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000168 - abiotic stress trait, TO:0000179 - biotic stress trait, TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000326 - leaf color, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0002667 - abscisic acid content, TO:0000442 - plant fresh weight, TO:0000516 - relative root length","PO:0001054 - 4 leaf senescence stage ","Os03g0159700","LOC_Os03g06370.2, LOC_Os03g06370.1",{"$nulls":6},"CBL5","OsCBL5","CALCINEURIN B-LIKE PROTEIN 5","Calcineurin B-like protein 5",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005513 - detection of calcium ion, GO:0042539 - hypotonic salinity response, GO:0030007 - cellular potassium ion homeostasis, GO:0005509 - calcium ion binding, GO:0016020 - membrane",null,null,"Os01g0598200","LOC_Os01g41510.1",null,"Os02g0805200","Os09g0440700",-0.9831006,0]
[{"$nulls":24},"Os07g0577600","Os08g0385000","Os08g0385000",-1.8925791,0,null,"Os07g0208500",3.1906679,"Os10g0413500",-1.124023,{"$nulls":29},"qPH-3-2(t) (ph3)","qPH-3-2(t) (ph3)","plant height (QTL)-3-2(t)","plant height (QTL)-3-2(t)",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA48","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0160100","LOC_Os02g06510.1",{"$nulls":6},"INVINH3","OsINVINH3, OS-INVINH3","INVERTASE INHIBITOR 3","invertase inhibitor 3",4," Biochemical character,  Seed - Morphological traits - Endosperm","GO:0043086 - negative regulation of catalytic activity, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0004857 - enzyme inhibitor activity","TO:0000653 - seed development trait","PO:0007633 - endosperm development stage , PO:0009089 - endosperm , PO:0001170 - seed development stage ","Os04g0587100","LOC_Os04g49720.1",{"$nulls":6},"CBL6","OsCBL6","CALCINEURIN B-LIKE PROTEIN 6","Calcineurin B-like protein 6",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding",null,null,"Os12g0162400","LOC_Os12g06510.1, LOC_Os12g06510.2, LOC_Os12g06510.3",null,"Os01g0209200","Os09g0505600",-0.9883463,0]
[{"$nulls":24},"Os03g0683800","Os02g0597800","Os02g0597800",-1.9015723,0,null,"Os12g0561900",3.1879838,"Os04g0502300",-1.1222967,{"$nulls":29},"qPH-5-1(t) (ph5a)","qPH-5-1(t) (ph5a)","plant height (QTL)-5-1(t)","plant height (QTL)-5-1(t)",5," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA49","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0179000","LOC_Os02g08240.1, LOC_Os02g08250.1",{"$nulls":6},"HDR3","OsHDR3","HOMOLOG OF DA1 ON RICE CHROMOSOME 3 ","ubiquitin-interacting motif-type ubiquitin receptor HDR3",3," Seed - Morphological traits - Grain shape","GO:0046872 - metal ion binding, GO:0043130 - ubiquitin binding, GO:0042127 - regulation of cell proliferation","TO:0000397 - grain size",null,"Os03g0267800","LOC_Os03g16090.2, LOC_Os03g16090.1",{"$nulls":6},"CBL7","OsCBL7","CALCINEURIN B-LIKE PROTEIN 7","Calcineurin B-like protein 7",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0031225 - anchored to membrane, GO:0005886 - plasma membrane, GO:0005509 - calcium ion binding",null,null,"Os02g0291000","LOC_Os02g18880.1",null,"Os08g0500700","Os01g0703600",-0.99137324,0]
[{"$nulls":24},"Os03g0711100","Os02g0468400","Os02g0468400",-1.9490962,0,null,"Os12g0569200",3.186245,"Os05g0220100",-1.1220307,{"$nulls":29},"qPH-5-2(t) (ph5b)","qPH-5-2(t) (ph5b)","plant height (QTL)-5-2(t)","plant height (QTL)-5-2(t)",5," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA50","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0188500","LOC_Os02g09530.1",{"$nulls":6},"GW10","OsGW10","GRAIN WIDTH 10","Grain Width gene on chromosome 10",10," Biochemical character,  Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0009742 - brassinosteroid mediated signaling, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000397 - grain size, TO:0000124 - flag leaf angle, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0002759 - grain number, TO:0002677 - brassinosteroid sensitivity",null,"Os10g0515400","LOC_Os10g37120.1",{"$nulls":6},"CBL8","OsCBL8","CALCINEURIN B-LIKE PROTEIN 8","Calcineurin B-like protein 8",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding, GO:0005886 - plasma membrane, GO:0031225 - anchored to membrane, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os02g0291400","LOC_Os02g18930.1",null,"Os05g0565900","Os06g0274000",-0.9914665,0]
[{"$nulls":24},"Os06g0695700","Os02g0794600","Os02g0794600",-1.9668465,0,null,"Os10g0427900",3.185252,"Os08g0504700",-1.1219383,{"$nulls":29},"qPH-7-1(t) (ph7)","qPH-7-1(t) (ph7)","plant height (QTL)-7-1(t)","plant height (QTL)-7-1(t)",7," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA52","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0193400","LOC_Os02g10000.1",{"$nulls":6},"RGN1","OsRGN1","REGULATOR OF GRAIN NUMBER 1","REGULATOR OF GRAIN NUMBER1",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009690 - cytokinin metabolic process","TO:0000449 - grain yield per plant, TO:0002660 - cytokinin content, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000557 - secondary branch number, TO:0000040 - panicle length, TO:0000621 - inflorescence development trait, TO:0002759 - grain number","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage ","Os01g0685400","LOC_Os01g49160.1",{"$nulls":6},"CBL9","OsCBL9","CALCINEURIN B-LIKE PROTEIN 9","Calcineurin B-like protein 9",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding",null,null,"Os01g0579600","LOC_Os01g39770.1, LOC_Os01g39770.2, LOC_Os01g39770.3",null,"Os08g0206900","Os07g0161600",-0.9919488,0]
[{"$nulls":24},"Os04g0640600","Os01g0557500","Os01g0557500",-1.9691057,0,null,"Os11g0114000",3.184474,"Os05g0134000",-1.1218661,{"$nulls":29},"qPH-3-3(t) (QPh3a)","qPH-3-3(t) (QPh3a)","plant height (QTL)-3-3(t)","plant height (QTL)-3-3(t)",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA53","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0197900","LOC_Os02g10440.1",{"$nulls":6},"SCR8","OsSCR8","SHORT CROWN ROOT 8","Short Crown Root 8",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009266 - response to temperature stimulus, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0048367 - shoot development, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0010449 - root meristem growth, GO:0006952 - defense response, GO:0005524 - ATP binding, GO:0043531 - ADP binding, GO:0048364 - root development, GO:0048830 - adventitious root development","TO:0002685 - crown root number, TO:0000656 - root development trait, TO:0002692 - root meristem development, TO:0000303 - cold tolerance, TO:0000470 - vascular tissue related trait, TO:0000296 - vegetative vigor, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0000432 - temperature response trait, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0000456 - spikelet number, TO:0000457 - total biomass yield, TO:0000654 - shoot development trait, TO:0000476 - growth hormone content","PO:0007520 - root development stage ","Os08g0246300","LOC_Os08g14850.1",{"$nulls":6},"CDPK13","OsCDPK13, OsCPK13, OsCDPK7, CDPK7, OsCPK13-1, OsCPK13-2","CALCIUM-DEPENDENT PROTEIN KINASE 13","calcium dependent protein kinase",4," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0004674 - protein serine/threonine kinase activity, GO:0010618 - aerenchyma formation, GO:0009735 - response to cytokinin stimulus, GO:0005509 - calcium ion binding, GO:0019722 - calcium-mediated signaling, GO:0010857 - calcium-dependent protein kinase activity, GO:0009733 - response to auxin stimulus, GO:0005524 - ATP binding, GO:0009739 - response to gibberellin stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0009628 - response to abiotic stimulus","TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000303 - cold tolerance, TO:0000168 - abiotic stress trait","PO:0000258 - root cortex ","Os04g0584600","LOC_Os04g49510.1, LOC_Os04g49510.2, LOC_Os04g49510.3, LOC_Os04g49510.4",null,"Os06g0327300","Os02g0628800",-0.99230146,0]
[{"$nulls":24},"Os02g0731700","Os03g0287100","Os03g0287100",-1.9793206,0,null,"Os11g0114150",3.184474,"Os09g0407900",-1.1218462,{"$nulls":29},"qPH-3-4(t) (QPh3b, QPh3a)","qPH-3-4(t) (QPh3b, QPh3a)","plant height (QTL)-3-4(t)","plant height (QTL)-3-4(t)",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA54","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0199800","LOC_Os02g10630.1",{"$nulls":6},"SDR7-6","OsSDR7-6","SHORT-CHAIN ALCOHOL DEHYDROGENASE/REDUCTASE 7-6","short-chain alcohol dehydrogenase/reductase 7-6",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0060548 - negative regulation of cell death, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0070265 - necrotic cell death, GO:0009416 - response to light stimulus, GO:0016491 - oxidoreductase activity, GO:0005783 - endoplasmic reticulum, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance, TO:0000075 - light sensitivity, TO:0000399 - grain thickness, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000605 - hydrogen peroxide content, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease",null,"Os07g0663900 ","LOC_Os07g46860.1",{"$nulls":6},"CP1","OsCP1, Os CP1","CYSTEINE PROTEASE 1","cysteine protease1, Cysteine protease 1, Cys protease 1",4," Biochemical character,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010446 - response to alkalinity, GO:0006508 - proteolysis, GO:0048653 - anther development, GO:0004197 - cysteine-type endopeptidase activity, GO:0009908 - flower development, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030154 - cell differentiation","TO:0000481 - alkali sensitivity","PO:0001004 - anther development stage ","Os04g0670500","LOC_Os04g57490.1",null,"Os09g0471900","Os02g0816900",-0.99345666,0]
[{"$nulls":24},"Os02g0174000","Os04g0673700","Os04g0673700",-1.9846896,0,null,"Os12g0530300",3.1832047,"Os03g0301200",-1.1215805,{"$nulls":29},"qPH-4-2(t) (QPh4)","qPH-4-2(t) (QPh4)","plant height (QTL)-4-2(t)","plant height (QTL)-4-2(t)",4," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA55","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0229600","LOC_Os02g13570.1, LOC_Os02g13580.1",{"$nulls":6},"BIRG1","OsBIRG1","BIG RICE GRAIN 1",null,3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0055064 - chloride ion homeostasis, GO:0010431 - seed maturation, GO:0005886 - plasma membrane, GO:0042910 - xenobiotic transporter activity, GO:0016020 - membrane, GO:0022857 - transmembrane transporter activity, GO:0015297 - antiporter activity, GO:0001558 - regulation of cell growth, GO:0009651 - response to salt stress, GO:0015108 - chloride transmembrane transporter activity, GO:0015562 - efflux transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000734 - grain length, TO:0000057 - grain moisture, TO:0000598 - protein content, TO:0000696 - starch content, TO:0001015 - photosynthetic rate, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0000068 - lodging incidence, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000397 - grain size, TO:0006001 - salt tolerance","PO:0020104 - leaf sheath , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0020141 - stem node , PO:0009010 - seed , PO:0009005 - root , PO:0009047 - stem , PO:0007632 - seed maturation stage , PO:0009051 - spikelet , PO:0025281 - pollen , PO:0009030 - carpel , PO:0000293 - guard cell , PO:0025034 - leaf ","Os03g0858800","LOC_Os03g64150.1",{"$nulls":6},"DR8","OsDR8, OsXNP, FOXRED1","PATHOGEN-INDUCED DEFENSE-RESPONSIVE PROTEIN 8","pathogen-induced defense-responsive protein 8, defenseresponsive gene 8, XopNKXO85 binding protein, FAD dependent oxidoreductase 1, FAD dependent oxidoreductase domain containing protein 1, Defence-response protein 8",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0006952 - defense response, GO:0009228 - thiamin biosynthetic process","TO:0000303 - cold tolerance",null,"Os07g0529600","LOC_Os07g34570.1, LOC_Os07g34570.2",null,"Os02g0128400","Os04g0346100",-0.9936447,0]
[{"$nulls":24},"Os10g0480200","Os04g0662700","Os04g0662700",-2.0392787,0,null,"Os11g0282800",3.18242,"Os04g0436800",-1.1202292,{"$nulls":29},"qPH-6-1(t) (QPh6)","qPH-6-1(t) (QPh6)","plant height (QTL)-6-1(t)","plant height (QTL)-6-1(t)",6," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA56","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0244000","LOC_Os02g14710.1",{"$nulls":6},"FLO19","ptPDC-E1-alpha1, OsptPDC-E1-alpha1","FLOURY ENDOSPERM 19","floury endosperm19, Plastidic pyruvate dehydrogenase complex E1 component subunit Alpha1, plastid-localized pyruvate dehydrogenase complex E1 component subunit alpha1",4," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0006086 - acetyl-CoA biosynthetic process from pyruvate, GO:0006096 - glycolysis, GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity, GO:0009507 - chloroplast, GO:0043231 - intracellular membrane-bounded organelle, GO:0019375 - galactolipid biosynthetic process, GO:0009660 - amyloplast organization, GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0009536 - plastid","TO:0000397 - grain size, TO:0000449 - grain yield per plant, TO:0000396 - grain yield, TO:0000181 - seed weight, TO:0000391 - seed size, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000196 - amylose content, TO:0000696 - starch content, TO:0000399 - grain thickness, TO:0002658 - starch grain synthesis, TO:0000604 - fat and essential oil content, TO:0000487 - endosperm color, TO:0000104 - floury endosperm, TO:0000592 - 1000-dehulled grain weight","PO:0007633 - endosperm development stage , PO:0000003 - whole plant , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009049 - inflorescence ","Os04g0119400","LOC_Os04g02900.2, LOC_Os04g02900.1",{"$nulls":6},"EBP-89","OsEBP-89, ebp-89, OsERF#060, OsERF060, OsERF60, ERF60, AP2/EREBP#027, AP2/EREBP27, OsEBP89, DLN76, OsDLN76","EREBP TRANSCRIPTION FACTOR","EREBP transcription factor, ethylene response factor 60, APETALA2/ethylene-responsive element binding protein 27, DLN repressor 76, DLN motif protein 76",3," Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0009723 - response to ethylene stimulus, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009733 - response to auxin stimulus","TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0000173 - ethylene sensitivity",null,"Os03g0182800","LOC_Os03g08460.1",null,"Os10g0389000","Os08g0199300",-0.99463063,0]
[{"$nulls":24},"Os11g0638000","Os12g0583300","Os12g0583300",-2.0417502,0,null,"Os07g0282500",3.1807296,"Os02g0653900",-1.1199366,{"$nulls":29},"qPH-8-1(t) (QPh8)","qPH-8-1(t) (QPh8)","plant height (QTL)-8-1(t)","plant height (QTL)-8-1(t)",8," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA57","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os02g17630",{"$nulls":6},"GSN5","qGSN5, OsGSN5","GRAIN SIZE AND GRAIN NUMBER 5","grain size and grain number 5",5," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0042127 - regulation of cell proliferation","TO:0002759 - grain number, TO:0000397 - grain size",null,"Os05g0548600","LOC_Os05g47510.1",{"$nulls":6},"EIL1","OsEIL1, EIN3, OsEIN3, MHZ6, OsEIL1a, EIL1a","ETHYLENE INSENSITIVE-LIKE GENE 1","EIN3-like protein 1, ethylene-insensitive 3, ETHYLENE INSENSITIVE3-LIKE 1, EIN3-LIKE 1, EIN3-like 1",3," Vegetative organ - Leaf,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Other","GO:0010150 - leaf senescence, GO:0003677 - DNA binding, GO:0042742 - defense response to bacterium, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009873 - ethylene mediated signaling pathway, GO:0003700 - transcription factor activity, GO:0010601 - positive regulation of auxin biosynthetic process, GO:0048364 - root development, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus","TO:0000043 - root anatomy and morphology trait, TO:0000173 - ethylene sensitivity, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000620 - embryo development trait, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0001031 - 4 root elongation stage ","Os03g0324200","LOC_Os03g20780.1",null,"Os02g0621700","Os09g0413500",-1.0014938,0]
[{"$nulls":24},"Os01g0378100","Os01g0160800","Os01g0160800",-2.0618272,0,null,"Os08g0498600",3.176936,"Os05g0111100",-1.1190509,{"$nulls":29},"qPH-1-2(t) (ph1.1)","qPH-1-2(t) (ph1.1)","plant height (QTL)-1-2(t)","plant height (QTL)-1-2(t)",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA58","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0308300","LOC_Os02g20530.1",{"$nulls":6},"POST","OsPOST","POLLEN STERILITY",null,7," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Grain shape","GO:0010208 - pollen wall assembly, GO:0051782 - negative regulation of cell division, GO:0043067 - regulation of programmed cell death, GO:0009555 - pollen development, GO:0019222 - regulation of metabolic process","TO:0000397 - grain size, TO:0000053 - pollen sterility, TO:0000639 - seed fertility, TO:0000218 - pollen abortion type, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0020048 - microspore , PO:0001007 - pollen development stage , PO:0025313 - tapetum ","Os07g0175300","LOC_Os07g07900.2, LOC_Os07g07900.1",{"$nulls":6},"EIL2","OsEIL2","ETHYLENE INSENSITIVE-LIKE GENE 2","EIN3-like protein 2, ETHYLENE INSENSITIVE3-LIKE 2, EIN3-LIKE 2",7," Tolerance and resistance - Stress tolerance,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0009723 - response to ethylene stimulus, GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0009873 - ethylene mediated signaling pathway","TO:0000173 - ethylene sensitivity, TO:0000429 - salt sensitivity",null,"Os07g0685700","LOC_Os07g48630.2, LOC_Os07g48630.1",null,"Os03g0858400","Os07g0130100",-1.0069436,0]
[{"$nulls":24},"Os08g0161800","Os02g0206100","Os02g0206100",-2.2081861,0,null,"Os02g0273800",3.1768446,"Os10g0405300",-1.1174654,{"$nulls":29},"qPH-1-3(t) (ph1.2)","qPH-1-3(t) (ph1.2)","plant height (QTL)-1-3(t)","plant height (QTL)-1-3(t)",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA59","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os02g31950",{"$nulls":6},"SCYL2","OsSCYL2","SCY1-LIKE 2","SCY1-LIKE2",1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030136 - clathrin-coated vesicle, GO:0005524 - ATP binding, GO:0006898 - receptor-mediated endocytosis, GO:0009658 - chloroplast organization, GO:0004672 - protein kinase activity, GO:0045088 - regulation of innate immune response, GO:0005794 - Golgi apparatus, GO:0005802 - trans-Golgi network, GO:0016192 - vesicle-mediated transport, GO:0009416 - response to light stimulus, GO:0010941 - regulation of cell death, GO:0042742 - defense response to bacterium, GO:0010150 - leaf senescence, GO:0010728 - regulation of hydrogen peroxide biosynthetic process","TO:0000734 - grain length, TO:0000075 - light sensitivity, TO:0000063 - mimic response, TO:0000316 - photosynthetic ability, TO:0000315 - bacterial disease resistance, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000605 - hydrogen peroxide content, TO:0000325 - soluble protein content, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000175 - bacterial blight disease resistance","PO:0009005 - root , PO:0025034 - leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath ","Os01g0616100","LOC_Os01g42950.2, LOC_Os01g42950.1",{"$nulls":6},"EREBP1","OsEREBP1, OsERF#070, OsERF070, OsERF70, ERF70, AP2/EREBP#084, AP2/EREBP84","ETHYLENE-RESPONSIVE ELEMENT-BINDING PROTEIN 1","ethylene-responsive element-binding protein 1, ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN1, Ethylene-responsive transcription factor 1, Ethylene-responsive element-binding factor 1, ethylene response factor 70, APETALA2/ethylene-responsive element binding protein 84",2," Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0006952 - defense response, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0006350 - transcription, GO:0003700 - transcription factor activity, GO:0009635 - response to herbicide, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000058 - herbicide sensitivity, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance",null,"Os02g0782700","LOC_Os02g54160.1, LOC_Os02g54160.2",null,"Os08g0109400","Os09g0567300",-1.0140098,0]
[{"$nulls":24},"Os07g0544800","Os05g0468800","Os05g0468800",-2.2173927,0,null,"Os11g0544000",3.174694,"Os02g0209000",-1.1169,{"$nulls":29},"qPH-4-3(t) (ph4.1)","qPH-4-3(t) (ph4.1)","plant height (QTL)-4-3(t)","plant height (QTL)-4-3(t)",4," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA60","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os02g32020",{"$nulls":6},"SDV1","OsSDV1","SEED DEVELOPMENT 1",null,6," Reproductive organ - Pollination, fertilization, fertility - Segregation distortion,  Seed","GO:0048316 - seed development","TO:0000036 - hybrid incompatibility, TO:0000639 - seed fertility, TO:0000653 - seed development trait","PO:0001170 - seed development stage ",{"$nulls":8},"EXPB1B","OsEXPB1, EXPB1b, OsaEXPb1.3, Ory s I, EXPB1.1","BETA-EXPANSIN 1B","Expansin-B1, Beta-expansin-1, Major pollen allergen Ory s 1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0019898 - extrinsic to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0010044 - response to aluminum ion, GO:0007047 - cell wall organization, GO:0005576 - extracellular region, GO:0019953 - sexual reproduction","TO:0000354 - aluminum sensitivity",null,"Os03g0106900","LOC_Os03g01650.1",null,"Os11g0153800","Os01g0276800",-1.0185047,0]
[{"$nulls":24},"Os04g0640700","Os02g0571900","Os02g0571900",-2.23141,0,null,"Os01g0219300",3.1744747,"Os03g0852300",-1.1165094,{"$nulls":29},"qPH-5-3(t) (ph5.1)","qPH-5-3(t) (ph5.1)","plant height (QTL)-5-3(t)","plant height (QTL)-5-3(t)",5," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA61","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0520100","LOC_Os02g32060.1, LOC_Os02g32060.2, LOC_Os02g32060.3",{"$nulls":6},"RF1","OsRF1","RING FINGER PROTEIN 1","RING finger protein 1",9," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0005789 - endoplasmic reticulum membrane, GO:0008270 - zinc ion binding, GO:0044260 - cellular macromolecule metabolic process, GO:0044238 - primary metabolic process","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000253 - seed dormancy, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000136 - relative water content",null,"Os09g0478600","LOC_Os09g30160.1",{"$nulls":6},"FEN1","OsFEN1, OsFEN-1a, FEN-1","FLAP ENDONUCLEASE 1","flap endonuclease-1, Flap endonuclease-1a",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0004519 - endonuclease activity, GO:0048256 - flap endonuclease activity, GO:0010332 - response to gamma radiation, GO:0006281 - DNA repair, GO:0000287 - magnesium ion binding, GO:0005634 - nucleus",null,null,"Os05g0540100","LOC_Os05g46270.1",null,"Os07g0173700","Os06g0301000",-1.0257816,0]
[{"$nulls":24},"Os12g0446900","Os07g0509800","Os07g0509800",-2.2966893,0,null,"Os05g0134400",3.1733818,"Os04g0118500",-1.1153221,{"$nulls":29},"qPH-8-2(t) (ph8.1)","qPH-8-2(t) (ph8.1)","plant height (QTL)-8-2(t)","plant height (QTL)-8-2(t)",8," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA62","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os02g33410",{"$nulls":6},"S1A4",null,"_",null,6," Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility,  Seed","GO:0005634 - nucleus, GO:0010431 - seed maturation","TO:0002661 - seed maturation, TO:0000358 - female sterility, TO:0000437 - male sterility, TO:0000421 - pollen fertility, TO:0000053 - pollen sterility, TO:0000592 - 1000-dehulled grain weight, TO:0000042 - f1-hybrid incompatibility, TO:0000436 - spikelet sterility","PO:0007632 - seed maturation stage , PO:0009049 - inflorescence , PO:0009066 - anther ",{"$nulls":8},"FOR1","OsFOR1, Osfor1, OsPGIP5, PGIP5","FLORAL ORGAN REGULATOR 1","rice floral organ regulator-1, Floral organ regulator 1, Polygalacturonase-inhibiting protein 5",7," Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048833 - specification of floral organ number, GO:0004857 - enzyme inhibitor activity, GO:0042742 - defense response to bacterium, GO:0032940 - secretion by cell, GO:0030154 - cell differentiation, GO:0005515 - protein binding, GO:0016023 - cytoplasmic membrane-bounded vesicle","TO:0000208 - lemma number, TO:0000223 - pistil anatomy and morphology trait, TO:0000209 - palea number, TO:0000203 - bacterial leaf streak disease resistance, TO:0000657 - spikelet anatomy and morphology trait, TO:0000225 - stamen number","PO:0004706 - flower primordium , PO:0005052 - plant callus , PO:0009082 - spikelet floret ","Os07g0568700","LOC_Os07g38130.1",null,"Os04g0644800","Os02g0823300",-1.0271245,0]
[{"$nulls":24},"Os11g0438000","Os06g0253100","Os06g0253100",-2.3089805,0,null,"Os01g0946100",3.172395,"Os12g0425800",-1.114543,{"$nulls":29},"qPH-12-1(t) (ph12.1)","qPH-12-1(t) (ph12.1)","plant height (QTL)-12-1(t)","plant height (QTL)-12-1(t)",12," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA63","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0541900","LOC_Os02g33740.1",{"$nulls":6},"S1A6",null,"_",null,6," Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility,  Seed","GO:0010431 - seed maturation, GO:0005634 - nucleus","TO:0000436 - spikelet sterility, TO:0000042 - f1-hybrid incompatibility, TO:0000437 - male sterility, TO:0000421 - pollen fertility, TO:0000053 - pollen sterility, TO:0000592 - 1000-dehulled grain weight, TO:0002661 - seed maturation, TO:0000358 - female sterility","PO:0009066 - anther , PO:0009049 - inflorescence , PO:0007632 - seed maturation stage ",{"$nulls":8},"GNA1","OsGNA1","GLUCOSAMINE-6-P ACETYLTRANSFERASE 1","glucosamine-6-P acetyltransferase-1",9," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus, GO:0005789 - endoplasmic reticulum membrane, GO:0006045 - N-acetylglucosamine biosynthetic process, GO:0048364 - root development, GO:0006048 - UDP-N-acetylglucosamine biosynthetic process, GO:0004343 - glucosamine 6-phosphate N-acetyltransferase activity","TO:0000227 - root length, TO:0000432 - temperature response trait, TO:0000207 - plant height","PO:0001031 - 4 root elongation stage ","Os09g0488000","LOC_Os09g31310.1",null,"Os09g0370500","Os04g0654700",-1.027928,0]
[{"$nulls":24},"Os09g0264400","Os09g0509500","Os09g0509500",-2.3403277,0,null,"Os02g0660100",3.1684685,"Os03g0321400",-1.113903,{"$nulls":29},"qPH-1-5(t) (ph1.1)","qPH-1-5(t) (ph1.1)","plant height (QTL)-1-5(t)","plant height (QTL)-1-5(t)",1," Vegetative organ - Culm",{"$nulls":12},"WSL4","OsSTA65, STA65","WHITE STRIPE LEAF 4","white stripe leaf4",2," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009658 - chloroplast organization, GO:0000373 - Group II intron splicing, GO:0009451 - RNA modification, GO:0003723 - RNA binding, GO:0004519 - endonuclease activity, GO:0042644 - chloroplast nucleoid, GO:0009409 - response to cold, GO:0048366 - leaf development","TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000069 - variegated leaf, TO:0000655 - leaf development trait, TO:0000303 - cold tolerance","PO:0009066 - anther , PO:0025034 - leaf , PO:0001050 - leaf development stage ","Os02g0565400","LOC_Os02g35750.1, LOC_Os02g35750.2, LOC_Os02g35750.3",{"$nulls":6},"SDV2","OsSDV2","SEED DEVELOPMENT 2",null,null," Reproductive organ - Pollination, fertilization, fertility - Segregation distortion,  Seed","GO:0048316 - seed development","TO:0000639 - seed fertility, TO:0000036 - hybrid incompatibility, TO:0000653 - seed development trait","PO:0001170 - seed development stage ",{"$nulls":8},"HOX6","Oshox6, OsHox6","HOMEOBOX GENE 6","rice homeobox gene 6, Homeobox-leucine zipper protein HOX6, Homeodomain transcription factor HOX6, HD-ZIP protein HOX6",9," Tolerance and resistance - Stress tolerance,  Other","GO:0030912 - response to deep water, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding","TO:0000524 - submergence tolerance",null,"Os09g0528200","LOC_Os09g35910.1",null,"Os01g0827500","Os12g0142900",-1.0300418,0]
[{"$nulls":24},"Os01g0206700","Os02g0700400","Os02g0700400",-2.3747659,0,null,"Os06g0308300",3.1682217,"Os11g0226700",-1.1133829,{"$nulls":29},"qPH-4-4(t) (ph4.1)","qPH-4-4(t) (ph4.1)","plant height (QTL)-4-4(t)","plant height (QTL)-4-4(t)",4," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA67","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0634100","LOC_Os02g42280.1",{"$nulls":6},"MISSEN","OsMISSEN","MIS-SHAPEN ENDOSPERM","lncRNA MISSEN",8," Seed - Morphological traits - Endosperm","GO:0007010 - cytoskeleton organization, GO:0010342 - cellularization of endosperm, GO:0031113 - regulation of microtubule polymerization, GO:0009960 - endosperm development, GO:0000280 - nuclear division","TO:0000484 - seed shape","PO:0009089 - endosperm , PO:0007633 - endosperm development stage ",{"$nulls":8},"HSP","Oshsp","SMALL HEAT SHOCK PROTEIN","small heat shock protein",null," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0042026 - protein refolding, GO:0003773 - heat shock protein activity",{"$nulls":5},"Os02g0713400","Os01g0922800",-1.0300881,0]
[{"$nulls":24},"Os08g0414700","Os10g0118200","Os10g0118200",-2.3761005,0,null,"Os04g0640600",3.16819,"Os05g0145400",-1.1132355,{"$nulls":29},"qPH-6-2(t) (ph6.1)","qPH-6-2(t) (ph6.1)","plant height (QTL)-6-2(t)","plant height (QTL)-6-2(t)",6," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA68","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0655500","LOC_Os02g43840.1",{"$nulls":6},"LO9-177","OsLO9-177","_","small KxDL motif-containing protein LO9-177",3," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0002687 - cell elongation trait",null,"Os03g0640400","LOC_Os03g43910.1",{"$nulls":6},"HSP101","Oshsp101, OsHSP101, ClpB-cyt, OsClpB-cyt, ClpB-C/Hsp100, OsClpB-C","HEAT SHOCK PROTEIN 101","Heat shock protein 101, class I Clp ATPase B-CYT, Clp-B cytoplasmic, Heat shock protein 101, ClpB/Hsp100 cytoplasmic isoform",5," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0005515 - protein binding, GO:0017111 - nucleoside-triphosphatase activity, GO:0019538 - protein metabolic process, GO:0005524 - ATP binding, GO:0006950 - response to stress","TO:0000259 - heat tolerance",null,"Os05g0519700","LOC_Os05g44340.1",null,"Os05g0501700","Os03g0259300",-1.0309225,0]
[{"$nulls":24},"Os03g0278900","Os12g0155100","Os12g0155100",-2.4170163,0,null,"Os07g0160100",3.168094,"Os08g0509500",-1.1117716,{"$nulls":29},"qPH-10-1(t) (ph10.1)","qPH-10-1(t) (ph10.1)","plant height (QTL)-10-1(t)","plant height (QTL)-10-1(t)",10," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA69","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0661500","LOC_Os02g44270.1, LOC_Os02g44270.2",{"$nulls":6},"ASNASE2","OsASNase2, ASNase2","ASPARAGINASE 2","asparaginase2, asparaginase 2",4," Biochemical character,  Vegetative organ - Leaf,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016787 - hydrolase activity, GO:0004067 - asparaginase activity, GO:0048316 - seed development, GO:0006530 - asparagine catabolic process, GO:0010150 - leaf senescence","TO:0000249 - leaf senescence, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009051 - spikelet , PO:0005020 - vascular bundle , PO:0008007 - nucellar projection , PO:0009001 - fruit , PO:0004006 - mesophyll cell , PO:0000071 - companion cell , PO:0020103 - flag leaf , PO:0001054 - 4 leaf senescence stage , PO:0000074 - parenchyma cell ","Os04g0650700  ","LOC_Os04g55710.1",{"$nulls":6},"HSP16.9A","Oshsp16.9A, OsHsp16.9A, HSP16.9A, OsHSP16.9A-CI","16.9 KDA CLASS I HEAT SHOCK PROTEIN 1","16.9 kDa class I heat shock protein 1, 16.9 kDa heat shock protein 1",1," Tolerance and resistance - Stress tolerance","GO:0009644 - response to high light intensity, GO:0010286 - heat acclimation, GO:0042542 - response to hydrogen peroxide, GO:0009408 - response to heat, GO:0051259 - protein oligomerization, GO:0005737 - cytoplasm","TO:0000653 - seed development trait, TO:0000259 - heat tolerance",null,"Os01g0136100","LOC_Os01g04370.1",null,"Os02g0469600","Os10g0537400",-1.0368563,0]
[{"$nulls":24},"Os09g0533900","Os06g0694200","Os06g0694200",-2.4355953,0,null,"Os03g0708000",3.166088,"Os06g0103200",-1.1100157,{"$nulls":29},"qPH-11-2(t) (ph11.1)","qPH-11-2(t) (ph11.1)","plant height (QTL)-11-2(t)","plant height (QTL)-11-2(t)",11," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA71, OsARID2, ARID2","_","AT-rich Interaction Domain-containing protein 2",2," Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding",null,"PO:0009066 - anther ","Os02g0714300","LOC_Os02g48370.1, LOC_Os02g48370.2",{"$nulls":6},"DG1",null,"DEFECTIVE GLUME 1 ","defective glume 1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048437 - floral organ development, GO:0008283 - cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0001558 - regulation of cell growth, GO:0009908 - flower development","TO:0002677 - brassinosteroid sensitivity, TO:0000622 - flower development trait, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002637 - leaf size, TO:0000206 - leaf angle, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0002601 - stamen size, TO:0000215 - stamen anatomy and morphology trait, TO:0006012 - carpel anatomy and morphology trait, TO:0000162 - seed quality, TO:0000402 - grain width","PO:0007615 - flower development stage , PO:0007600 - floral organ differentiation stage ",{"$nulls":8},"HSP16.9B","Oshsp16.9B, OsHsp16.9B, HSP16.9B, OsHsp17.0, OsHSP16.9B-CI, OsHSP17.0, OsSHSP2, OsSTA3","16.9 KDA CLASS I HEAT SHOCK PROTEIN 2","16.9 kDa class I heat shock protein 2, 16.9 kDa heat shock protein 2",1," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005737 - cytoplasm, GO:0042542 - response to hydrogen peroxide, GO:0010286 - heat acclimation, GO:0009644 - response to high light intensity, GO:0009408 - response to heat","TO:0000259 - heat tolerance","PO:0009066 - anther ","Os01g0136200","LOC_Os01g04380.1",null,"Os01g0536000","Os02g0187100",-1.0447325,0]
[{"$nulls":24},"Os02g0173100","Os03g0439700","Os03g0439700",-2.4554412,0,null,"Os07g0525900",3.1640575,"Os07g0603800",-1.1091557,{"$nulls":29},"SPL5-2(T)","spl5-2(t), spl5-2","SPOTTED LEAF5-2(T)","spotted leaf5-2(t), spotted leaf 5-2",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000207 - plant height",{"$nulls":10},"_","OsSTA72","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0724500","LOC_Os02g49260.1",{"$nulls":6},"_","OsDW1-01g","_",null,1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits",null,"TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000206 - leaf angle, TO:0000207 - plant height",null,"Os01g0103800","LOC_Os01g01390.1, LOC_Os01g01390.2, LOC_Os01g01390.3, LOC_Os01g01390.4, LOC_Os01g01390.5",{"$nulls":6},"HSP16.9C","Oshsp16.9C, OsHsp16.9C, HSP16.9C, OsHSP16.9C-CI, Oshsp 16.9C","16.9 KDA CLASS I HEAT SHOCK PROTEIN 3","16.9 kDa class I heat shock protein 3, 16.9 kDa heat shock protein 3",1," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0005737 - cytoplasm","TO:0000259 - heat tolerance",null,"Os01g0136000","LOC_Os01g04360.1",null,"Os02g0618100","Os02g0701600",-1.0467001,0]
[{"$nulls":24},"Os03g0315800","Os01g0954000","Os01g0954000",-2.5308225,0,null,"Os03g0196400",3.1623716,"Os05g0310800",-1.1082029,{"$nulls":29},"SPL12","Spl12(t), Spl12*, Spl12","SPOTTED LEAF 12","Spotted leaf12(t), Spotted leaf-12, spotted leaf 12",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000207 - plant height, TO:0000063 - mimic response","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":9},"_","OsSTA74","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0730600","LOC_Os02g49790.1",{"$nulls":6},"_","OsDW1-03g","_",null,3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits",null,"TO:0000484 - seed shape, TO:0000146 - seed length, TO:0000206 - leaf angle, TO:0000207 - plant height",null,"Os03g0270700","LOC_Os03g16400.1",{"$nulls":6},"HSP16.9D","Oshsp16.9D","16.9 KDA CLASS I HEAT SHOCK PROTEIN 4","16.9 kDa small heat shock protein 4",null," Tolerance and resistance - Stress tolerance","GO:0003773 - heat shock protein activity, GO:0009408 - response to heat, GO:0042026 - protein refolding","TO:0000259 - heat tolerance",{"$nulls":4},"Os09g0440300","Os02g0775100",-1.0512816,0]
[{"$nulls":24},"Os03g0248300","Os02g0816600","Os02g0816600",-2.582194,0,null,"Os07g0184800",3.1617622,"Os03g0833700",-1.1080414,{"$nulls":29},"SPL13","spl13(t), spl13*, spl13","SPOTTED LEAF 13","spotted leaf13(t), spotted leaf-13, spotted leaf 13",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000207 - plant height","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":9},"_","OsSTA76","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0735000","LOC_Os02g50220.1",{"$nulls":6},"_","BPM","_","2, 3-bisphosphoglycerate-independent phosphoglycerate mutase",1," Biochemical character,  Seed,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0009651 - response to salt stress, GO:0009415 - response to water, GO:0006007 - glucose catabolic process, GO:0005737 - cytoplasm, GO:0004619 - phosphoglycerate mutase activity","TO:0006001 - salt tolerance, TO:0000237 - water stress trait","PO:0007022 - seed imbibition stage ","Os01g0817700","LOC_Os01g60190.1, LOC_Os01g60190.2",{"$nulls":6},"HSP17.3","OsHsp17.3, OsHSP17.3, Oshsp17.3","17.3 KDA CLASS I HEAT SHOCK PROTEIN ","17.3 kDa class I heat shock protein, 17.3 kDa heat shock protein, 17.3-kD class I heat shock protein",3," Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0009408 - response to heat, GO:0042026 - protein refolding, GO:0046686 - response to cadmium ion, GO:0046688 - response to copper ion, GO:0003773 - heat shock protein activity, GO:0042542 - response to hydrogen peroxide, GO:0045471 - response to ethanol, GO:0005737 - cytoplasm","TO:0000259 - heat tolerance",null,"Os03g0266900","LOC_Os03g16020.1",null,"Os01g0842200","Os11g0183700",-1.051901,0]
[{"$nulls":24},"Os03g0391400","Os12g0577600","Os12g0577600",-2.6025782,0,null,"Os12g0559100",3.1552646,"Os05g0130600",-1.1079992,{"$nulls":29},"SPL14","spl14(t), spl14*, spl14","SPOTTED LEAF 14","spotted leaf14(t), spotted leaf-14, spotted leaf 14",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000207 - plant height","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":9},"_","OsSTA78","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0753500","LOC_Os02g51730.1",{"$nulls":6},"ARS",null,"ARGININOSUCCINATE SYNTHASE","Argininosuccinate synthase",12," Biochemical character,  Seed,  Tolerance and resistance - Stress tolerance","GO:0000053 - argininosuccinate metabolic process, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0004055 - argininosuccinate synthase activity, GO:0009651 - response to salt stress, GO:0000050 - urea cycle, GO:0006526 - arginine biosynthetic process","TO:0006001 - salt tolerance","PO:0007022 - seed imbibition stage ","Os12g0235800","LOC_Os12g13320.1",{"$nulls":6},"HSP17.7","OsHsp17.7, OsHSP17.4-CI, OsHSP17.7, Oshsp17.7","17.7 KDA CLASS I HEAT SHOCK PROTEIN","17.7 kDa class I heat shock protein, 17.7 kDa heat shock protein, 17.7-kD class I heat shock protein",3," Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0009408 - response to heat, GO:0045471 - response to ethanol, GO:0042542 - response to hydrogen peroxide, GO:0005737 - cytoplasm, GO:0046686 - response to cadmium ion, GO:0046688 - response to copper ion","TO:0000259 - heat tolerance",null,"Os03g0267200","LOC_Os03g16040.1",null,"Os01g0375200","Os03g0437600",-1.0550466,0]
[{"$nulls":24},"Os09g0422500","Os01g0832600","Os01g0832600",-2.618396,0,null,"Os08g0280100",3.153022,"Os01g0733600",-1.1077743,{"$nulls":29},"SPL15","Spl15(t), Spl15*, Spl15","SPOTTED LEAF 15","Spotted leaf15(t), Spotted leaf-15, Spotted leaf 15",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000207 - plant height","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":9},"_","OsSTA79","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0764400","LOC_Os02g52640.1",{"$nulls":6},"_","ARP","_","60S acidic ribosomal protein",11," Seed,  Tolerance and resistance - Stress tolerance","GO:0042254 - ribosome biogenesis, GO:0005840 - ribosome, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance","PO:0007022 - seed imbibition stage ","Os11g0135400","LOC_Os11g04070.1",{"$nulls":6},"HSP17.9A","Oshsp17.9A, OsHsp17.9A, OsHSP17.9A-CI, Oshsp17.9","17.9 KDA CLASS I HEAT SHOCK PROTEIN 1","17.9 kDa class I heat shock protein, 17.9 kDa heat shock protein 1, 17.9-kD class I heat shock protein",3," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009408 - response to heat","TO:0000259 - heat tolerance",null,"Os03g0266300","LOC_Os03g15960.1, LOC_Os03g15960.2",null,"Os09g0258600","Os03g0319000",-1.0559306,0]
[{"$nulls":24},"Os07g0539100","Os02g0758000","Os02g0758000",-2.6416028,0,null,"Os02g0524550",3.1521642,"Os01g0626300",-1.1074816,{"$nulls":29},"TD1","Td1(t)","TWISTED DWARF 1","Twisted dwarf1(t)",null," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":11},"_","OsSTA80","_","SRL2-like gene, semi-rolled leaf 2-like gene",2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0780500","LOC_Os02g53990.1",{"$nulls":6},"_","CDP3.2","_","cupin domain containing protein 3.2",3," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0045735 - nutrient reservoir activity, GO:0009651 - response to salt stress","TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os03g0336100","LOC_Os03g21790.1",{"$nulls":6},"HSP17.9B","Oshsp17.9B., OsHsp17.9B","17.9 KDA HEAT SHOCK PROTEIN 2","17.9 kDa heat shock protein 2",1," Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0006950 - response to stress","TO:0000259 - heat tolerance",null,"Os01g0135900","LOC_Os01g04350.1",null,"Os03g0215900","Os09g0570500",-1.0576597,0]
[{"$nulls":24},"Os04g0118100","Os05g0467600","Os05g0467600",-2.6420343,0,null,"Os02g0602000",3.15211,"Os02g0656500",-1.1058906,{"$nulls":29},"OSH6","OsH6, HOS16","HOMEOBOX 6","Oryza sativa homeobox6, Rice KNOX gene-6, Homeobox protein knotted-1-like 1, Homeobox protein OSH6, Homeobox protein HOS16, Oryza sativa Homeobox 6",1," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Vegetative organ - Root","GO:0003677 - DNA binding, GO:0043565 - sequence-specific DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0090058 - metaxylem development","TO:0000552 - shoot dry weight, TO:0002685 - crown root number, TO:0000470 - vascular tissue related trait, TO:0000492 - leaf shape, TO:0001009 - deep root number","PO:0009025 - vascular leaf ","Os01g0302500","LOC_Os01g19694.1",{"$nulls":7},"_","OsSTA81","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0781900","LOC_Os02g54100.1",{"$nulls":6},"_","OsAGSW1, AGSW1","_","ABC1-like kinase related to Grain size and Weight 1",5," Seed - Morphological traits","GO:0010618 - aerenchyma formation, GO:0010051 - xylem and phloem pattern formation, GO:0009507 - chloroplast, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0051302 - regulation of cell division","TO:0000391 - seed size, TO:0002661 - seed maturation, TO:0002761 - length of grain with hull, TO:0002762 - width of grain with hull, TO:0000484 - seed shape, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000590 - grain weight","PO:0005020 - vascular bundle ","Os05g0323800","LOC_Os05g25840.1, LOC_Os05g25840.3",{"$nulls":6},"HSP18.0-CII","OsHSP18.0-CII, Oshsp18.0-CII, OsHSP18.0, OsHSP18.2","18.0 KDA CLASS II HEAT SHOCK PROTEIN","18.0 kDa class II heat shock protein, small heat shock protein 18.0",1," Seed - Physiological traits - Longevity,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0005635 - nuclear envelope, GO:0005737 - cytoplasm, GO:0009408 - response to heat, GO:0010431 - seed maturation, GO:0046907 - intracellular transport, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0007568 - aging","TO:0002661 - seed maturation, TO:0000430 - germination rate, TO:0000259 - heat tolerance, TO:0000250 - vigor related trait, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000435 - seed longevity","PO:0007632 - seed maturation stage , PO:0009010 - seed ","Os01g0184100","LOC_Os01g08860.1, LOC_Os01g08860.2",null,"Os02g0535700","Os03g0424500",-1.0710932,0]
[{"$nulls":24},"Os02g0174100","Os08g0200600","Os08g0200600",-2.6602502,0,null,"Os05g0372833",3.1488063,"Os03g0758800",-1.1058044,{"$nulls":29},"RFL","RFL, OSL, FL, APO2, APO2/RFL, SSC, SSC/RFL/APO2, OsRFL, OsFL, OsAPO2, OsSSC","FLO-LFY HOMOLOG OF RICE","Rice LFY-like gene, Probable transcription factor FL, RICE FLORICAULA, ABERRANT PANICLE ORGANIZATION 2, RFL/ABERRANT PANICLE ORGANIZATION 2, SHORT and SOLID CULM, RICE FLORICAULA/LEAFY",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0010223 - secondary shoot formation, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0043067 - regulation of programmed cell death, GO:0045487 - gibberellin catabolic process, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0045449 - regulation of transcription, GO:0048573 - photoperiodism, flowering, GO:0010229 - inflorescence development, GO:0051510 - regulation of unidimensional cell growth, GO:0051302 - regulation of cell division, GO:0010073 - meristem maintenance, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0009742 - brassinosteroid mediated signaling","TO:0002616 - flowering time, TO:0006032 - panicle size, TO:0001035 - stem width, TO:0000145 - internode length, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000050 - inflorescence branching, TO:0000621 - inflorescence development trait, TO:0000547 - primary branch number, TO:0000329 - tillering ability, TO:0002759 - grain number, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity","PO:0000017 - vascular leaf primordium , PO:0006079 - shoot meristem , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage , PO:0000034 - vascular system ","Os04g0598300","LOC_Os04g51000.1",{"$nulls":7},"_","OsSTA82, STA82, OsPOP6, POP6","_","Prolyl Oligopeptidase 6, PROLYL OLIGOPEPTIDASE 6",2," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0796600","LOC_Os02g55330.1, LOC_Os02g55330.2",{"$nulls":6},"1CYSPRXA","Os1-CysPrxA, 1-CysPrxA","1-CYS PEROXIREDOXIN A","1 Cys-peroxiredoxin",7," Biochemical character,  Seed","GO:0051920 - peroxiredoxin activity, GO:0004601 - peroxidase activity, GO:0045454 - cell redox homeostasis, GO:0048316 - seed development",null,"PO:0009010 - seed , PO:0009089 - endosperm , PO:0007633 - endosperm development stage ","Os07g0638300","LOC_Os07g44430.1",{"$nulls":6},"INO1","OsINO1, MIPS, IPS, RINO1, OsINO1-1, OsRINO1, OsMIPS1, MIPS1","INOSITOL 1-PHOSPHATE SYNTHASE-1","inositol 1-phosphate synthase-1, Inositol-3-phosphate synthase, Myo-inositol-1-phosphate synthase, MI-1-P synthase, 1D-myo-inositol 3-phosphate synthase 1, rice myo-inositol-1-phosphate synthase, Ins(1)P1 synthase 1, 1L-myo-inositol-1-phosphate synthase 1, myo-inositol-1-phosphate synthase 1, L-myo-inositol 1-phosphate synthase 1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006021 - inositol biosynthetic process, GO:0009744 - response to sucrose stimulus, GO:0004512 - inositol-3-phosphate synthase activity, GO:0008654 - phospholipid biosynthetic process, GO:0005488 - binding, GO:0005737 - cytoplasm, GO:0009737 - response to abscisic acid stimulus, GO:0006793 - phosphorus metabolic process","TO:0000488 - seed composition based quality trait, TO:0002666 - seed phosphorus content, TO:0000615 - abscisic acid sensitivity, TO:0000064 - embryo related trait","PO:0009009 - plant embryo , PO:0009010 - seed ","Os03g0192700","LOC_Os03g09250.1, LOC_Os03g09250.2, LOC_Os03g09250.3, LOC_Os03g09250.4",null,"Os01g0948100","Os02g0274900",-1.0724908,0]
[{"$nulls":24},"Os07g0425000","Os03g0289800","Os03g0289800",-2.6708472,0,null,"Os02g0597700",3.1485977,"Os06g0318600",-1.1053046,{"$nulls":29},"qRN-3 (t) (QRn3)","qRN-3 (t) (QRn3)","rhizome number (QTL)-3 (t)","rhizome number (QTL)-3 (t)",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA83, DLN72, OsDLN72","_","DLN repressor 72, DLN motif protein 72",2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0823900","LOC_Os02g57790.1",{"$nulls":6},"GWD1","OsGWD1","ALPHA-GLUCAN, WATER DIKINASE 1","\\alpha-glucan, water dikinase 1\\\", \\\"Glucan, Water-Dikinase 1\\\"\"",6," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010030 - positive regulation of seed germination, GO:0005524 - ATP binding, GO:0016301 - kinase activity, GO:0005983 - starch catabolic process","TO:0000379 - cool paste viscosity, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000412 - setback viscosity, TO:0000374 - breakdown viscosity, TO:0002661 - seed maturation, TO:0000408 - hot paste viscosity, TO:0000409 - peak viscosity, TO:0000734 - grain length, TO:0000696 - starch content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000266 - chalky endosperm, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000371 - yield trait, TO:0000462 - gelatinization temperature, TO:0000449 - grain yield per plant","PO:0007057 - 0 seed germination stage , PO:0025034 - leaf ","Os06g0498400 ","LOC_Os06g30310.1",{"$nulls":6},"SAP1","Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1","STRESS ASSOCIATED PROTEIN GENE 1","rice (indica) stress associated protein gene1, Zinc finger A20 and AN1 domain-containing stress-associated protein 1, Multiple stress-responsive zinc finger protein ISAP1, O. sativa subspecies indica stress-associated protein 1, stress-associated protein 1",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0080134 - regulation of response to stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0006979 - response to oxidative stress, GO:0050832 - defense response to fungus, GO:0006950 - response to stress, GO:0009751 - response to salicylic acid stimulus, GO:0009611 - response to wounding, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009607 - response to biotic stimulus, GO:0042542 - response to hydrogen peroxide, GO:0003677 - DNA binding, GO:0030912 - response to deep water, GO:0008270 - zinc ion binding","TO:0000112 - disease resistance, TO:0000074 - blast disease, TO:0000179 - biotic stress trait, TO:0006001 - salt tolerance, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity","PO:0001170 - seed development stage ","Os09g0486500","LOC_Os09g31200.1",null,"Os02g0510000","Os02g0320100",-1.0746454,0]
[{"$nulls":24},"Os10g0371100","Os10g0530900","Os10g0530900",-2.7402694,0,null,"Os06g0223900",3.1477082,"Os02g0117400",-1.1048995,{"$nulls":29},"qRN-5 (t) (QRn5)","qRN-5 (t) (QRn5)","rhizome number (QTL)-5 (t)","rhizome number (QTL)-5 (t)",5," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA84","_",null,2," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os02g0830000","LOC_Os02g58330.1",{"$nulls":6},"_","OsFH15, FH15","_","formin homology 15, forming family protein 15, FH2 protein 15, FH2 domain protein 15",9," Seed - Morphological traits - Grain shape","GO:0001558 - regulation of cell growth, GO:0016021 - integral to membrane, GO:0051016 - barbed-end actin filament capping, GO:0016020 - membrane, GO:0051015 - actin filament binding, GO:0032233 - positive regulation of actin filament bundle formation, GO:0030041 - actin filament polymerization, GO:0008017 - microtubule binding","TO:0000397 - grain size","PO:0009010 - seed , PO:0009051 - spikelet , PO:0020148 - shoot apical meristem ","Os09g0517600","LOC_Os09g34180.1",{"$nulls":6},"OSK1","osk1, SnRK1A, OsSnRK1A, OsSNRK1a, SnRK1A/OSK1, SnRK1a, OsSnRK1.2, SnRK1.2","PROTEIN KINASE 1","protein kinase 1, SnRK1A protein kinase, sucrose non-fermenting-1 related protein kinase 1a",5," Biochemical character,  Seed,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010182 - sugar mediated signaling, GO:0006468 - protein amino acid phosphorylation, GO:0010431 - seed maturation, GO:0048316 - seed development, GO:0007165 - signal transduction, GO:0004674 - protein serine/threonine kinase activity, GO:0045926 - negative regulation of growth, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009628 - response to abiotic stimulus, GO:0009845 - seed germination, GO:2000028 - regulation of photoperiodism, flowering, GO:0051511 - negative regulation of unidimensional cell growth, GO:0051093 - negative regulation of developmental process, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0009409 - response to cold","TO:0000137 - days to heading, TO:0002661 - seed maturation, TO:0000255 - sheath blight disease resistance, TO:0000356 - brown spot disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000253 - seed dormancy, TO:0000280 - seedling vigor, TO:0000346 - tiller number, TO:0000168 - abiotic stress trait, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000227 - root length, TO:0002616 - flowering time","PO:0001170 - seed development stage , PO:0007632 - seed maturation stage ","Os05g0530500 ","LOC_Os05g45420.3, LOC_Os05g45420.2, LOC_Os05g45420.1",null,"Os01g0549700","Os01g0710000",-1.0754791,0]
[{"$nulls":24},"Os05g0137200","Os10g0416500","Os10g0416500",-2.8106415,0,null,"Os04g0386300",3.1463535,"Os12g0244200",-1.104826,{"$nulls":29},"qRN-10 (t) (QRn10)","qRN-10 (t) (QRn10)","rhizome number (QTL)-10 (t)","rhizome number (QTL)-10 (t)",10," Vegetative organ - Culm",{"$nulls":12},"CHX1","OsSTA85, STA85, OsCHX01, CHX01, OsCHX1","CATION/H+ EXCHANGER  1","cation/H+ exchanger  1",2," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0015672 - monovalent inorganic cation transport, GO:0016021 - integral to membrane, GO:0006885 - regulation of pH, GO:0012505 - endomembrane system, GO:0015299 - solute:hydrogen antiporter activity",null,"PO:0009066 - anther , PO:0009046 - flower ","Os02g0833500","LOC_Os02g58660.1, LOC_Os02g58660.2",{"$nulls":6},"_","HAL1","_","half-pipe-like leaf1, half-pipe-like leaf 1",null," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn",null,"TO:0000149 - seed width, TO:0000564 - spikelet width, TO:0002637 - leaf size, TO:0002681 - leaf curling, TO:0000614 - lemma shape, TO:0000575 - endosperm related trait","PO:0004001 - bulliform cell ",{"$nulls":8},"OSKN2","OsKn2, OsH71, HOS9, OSH71, OSH71/Oskn2","KNOX PROTEIN 2","KNOX protein 2, Oryza sativa homeobox71, Homeobox protein knotted-1-like 10, Homeobox protein OSH71, Homeobox protein HOS9, Homeobox protein knotted-1-like 2, Rice KNOX gene-71",5," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0030912 - response to deep water","TO:0000492 - leaf shape, TO:0000207 - plant height, TO:0002616 - flowering time, TO:0000524 - submergence tolerance","PO:0009025 - vascular leaf ","Os05g0129700","LOC_Os05g03884.1",null,"Os01g0723200","Os11g0484000",-1.0768477,0]
[{"$nulls":24},"Os09g0481200","Os12g0570700","Os12g0570700",-2.8166583,0,null,"Os07g0503500",3.1387196,"Os09g0447000",-1.1042371,{"$nulls":29},"qRN-6 (t) (QRn6)","qRN-6 (t) (QRn6)","rhizome number (QTL)-6 (t)","rhizome number (QTL)-6 (t)",6," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA87","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0124100","LOC_Os03g03270.1, LOC_Os03g03270.2",{"$nulls":6},"WTG1","OTUB1, OsOTUB1, OsOTUB1.1, OsOTUB1.2, qNPT1, OsWTG1","WIDE AND THICK GRAIN 1","new plant type 1, OTU domain-containing ubiquitin aldehyde-binding protein 1, wide and thick grain 1, otubain 1",8," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004843 - ubiquitin-specific protease activity, GO:0019784 - NEDD8-specific protease activity, GO:0005634 - nucleus, GO:0042127 - regulation of cell proliferation, GO:0071108 - protein K48-linked deubiquitination, GO:0043130 - ubiquitin binding","TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000382 - 1000-seed weight, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000397 - grain size, TO:0002730 - grain shape, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000051 - stem strength, TO:0000346 - tiller number","PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009010 - seed , PO:0009015 - portion of vascular tissue , PO:0020123 - root cap , PO:0020149 - quiescent center , PO:0006079 - shoot meristem ","Os08g0537800","LOC_Os08g42540.1, LOC_Os08g42540.2",{"$nulls":6},"DSG1","OsMAPK6, MAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, OsDSG1","DWARF AND SMALL GRAIN 1","Mitogen-activated protein kinase 1, MAP kinase 1, MAP kinase 6, dwarf and small grain1",6," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010200 - response to chitin, GO:0005524 - ATP binding, GO:0009524 - phragmoplast, GO:0009651 - response to salt stress, GO:0010120 - camalexin biosynthetic process, GO:0006952 - defense response, GO:0009790 - embryonic development, GO:0009741 - response to brassinosteroid stimulus, GO:0002238 - response to molecule of fungal origin, GO:0009414 - response to water deprivation, GO:0009690 - cytokinin metabolic process, GO:0045595 - regulation of cell differentiation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009409 - response to cold, GO:0009814 - defense response, incompatible interaction, GO:0009734 - auxin mediated signaling pathway, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0048364 - root development, GO:0009574 - preprophase band, GO:0043068 - positive regulation of programmed cell death, GO:0010268 - brassinosteroid homeostasis, GO:0080027 - response to herbivore, GO:0002213 - defense response to insect, GO:0004707 - MAP kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0048481 - ovule development, GO:0009742 - brassinosteroid mediated signaling, GO:0042542 - response to hydrogen peroxide, GO:0000165 - MAPKKK cascade, GO:0005737 - cytoplasm, GO:0006468 - protein amino acid phosphorylation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:2000038 - regulation of stomatal complex development, GO:0005802 - trans-Golgi network, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus, GO:0080136 - priming of cellular response to stress, GO:0009738 - abscisic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway, GO:0009733 - response to auxin stimulus, GO:0006979 - response to oxidative stress, GO:2000037 - regulation of stomatal complex patterning, GO:0042127 - regulation of cell proliferation, GO:0051301 - cell division","TO:0000447 - filled grain number, TO:0002668 - jasmonic acid content, TO:0002677 - brassinosteroid sensitivity, TO:0002676 - brassinosteroid content, TO:0002759 - grain number, TO:0000456 - spikelet number, TO:0000454 - stem borer resistance, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000203 - bacterial leaf streak disease resistance, TO:0006032 - panicle size, TO:0002669 - diterpenoid phytoalexin content, TO:0000273 - armyworm resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000175 - bacterial blight disease resistance, TO:0000439 - fungal disease resistance, TO:0002660 - cytokinin content, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0000074 - blast disease, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage , PO:0009051 - spikelet ","Os06g0154500","LOC_Os06g06090.2, LOC_Os06g06090.1",null,"Os01g0965500","Os11g0169900",-1.0773963,0]
[{"$nulls":24},"Os01g0228600","Os09g0444900","Os09g0444900",-2.847779,0,null,"Os02g0813600",3.1383317,"Os10g0452700",-1.1041776,{"$nulls":29},"qRN-2 (t) (QRn2)","qRN-2 (t) (QRn2)","rhizome number (QTL)-2 (t)","rhizome number (QTL)-2 (t)",2," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA89, STA89, OsDUF810.1, DUF810.1","_","domains of unknown function 810.1, DUF810 family member 1",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0009570 - chloroplast stroma",null,"PO:0009066 - anther ","Os03g0138600","LOC_Os03g04560.1",{"$nulls":6},"WG7","OsCW-ZF7, CW-ZF7, CWZF7, OsWG7","WIDE GRAIN 7","cysteine-tryptophan-domain containing zinc finger protein on chromosome 7, CW-domain containing zinc finger protein 7, CW-domain containing protein 7",7," Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0031062 - positive regulation of histone methylation, GO:0035064 - methylated histone residue binding, GO:0008270 - zinc ion binding","TO:0000072 - awn length",null,"Os07g0669800","LOC_Os07g47360.3, LOC_Os07g47360.2, LOC_Os07g47360.1",{"$nulls":6},"MSRMK2","OsMSRMK2, OsMAPK5, OsMAP1, OsMPK3, OsBIMK1, OsMAPK2, MPK5, BIMK1, MAPK2, MAPK5, MPK3, OsMPK5, OsMAPK3, OsMAPK5b, MAPK3","MULTIPLE STRESS RESPONSIVE MAP KINASE 2","multiple stress responsive MAP kinase 2, Mitogen-activated protein kinase 5, MAP kinase 5, Benzothiadiazole-induced MAP kinase 1, BTH-induced MAPK 1, MAP kinase 2, Multiple stress-responsive MAP kinase 2, MAP kinase 3",3," Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0048481 - ovule development, GO:0009611 - response to wounding, GO:0009790 - embryonic development, GO:0080027 - response to herbivore, GO:0009413 - response to flooding, GO:2000037 - regulation of stomatal complex patterning, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0010200 - response to chitin, GO:0050832 - defense response to fungus, GO:0009617 - response to bacterium, GO:0000165 - MAPKKK cascade, GO:0004707 - MAP kinase activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0010120 - camalexin biosynthetic process, GO:0007126 - meiosis, GO:0005524 - ATP binding, GO:0009723 - response to ethylene stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0080136 - priming of cellular response to stress, GO:0009814 - defense response, incompatible interaction, GO:0002213 - defense response to insect, GO:0042542 - response to hydrogen peroxide, GO:0009734 - auxin mediated signaling pathway, GO:0009753 - response to jasmonic acid stimulus, GO:0006952 - defense response, GO:2000038 - regulation of stomatal complex development, GO:0006468 - protein amino acid phosphorylation, GO:0048364 - root development, GO:0000169 - activation of MAPK activity involved in osmosensory signaling pathway, GO:0009411 - response to UV, GO:0009735 - response to cytokinin stimulus, GO:0006970 - response to osmotic stress, GO:0009733 - response to auxin stimulus, GO:0006979 - response to oxidative stress","TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000160 - UV light sensitivity, TO:0000286 - submergence sensitivity, TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000439 - fungal disease resistance, TO:0002660 - cytokinin content, TO:0002669 - diterpenoid phytoalexin content, TO:0000276 - drought tolerance, TO:0000315 - bacterial disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006003 - oligosaccharide content, TO:0000303 - cold tolerance, TO:0000173 - ethylene sensitivity, TO:0000454 - stem borer resistance, TO:0006001 - salt tolerance, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity, TO:0000273 - armyworm resistance, TO:0000112 - disease resistance","PO:0007520 - root development stage ","Os03g0285800","LOC_Os03g17700.1",null,"Os12g0641400","Os01g0948400",-1.0818833,0]
[{"$nulls":24},"Os02g0510200","Os10g0389200","Os10g0389200",-2.9787807,0,null,"Os07g0561800",3.1362507,"Os10g0560850",-1.1030636,{"$nulls":29},"qRN-7 (t) (QRn7)","qRN-7 (t) (QRn7)","rhizome number (QTL)-7 (t)","rhizome number (QTL)-7 (t)",7," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA90","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0164800","LOC_Os03g06890.1",{"$nulls":6},"_","GL4, GL4/ObSH4, SH4","_","grain length on chromosome 4, GRAIN LENGTH 4",4," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000391 - seed size",{"$nulls":9},"MT2B","OsMT2b, MT2b, OsMT-I-2c, MT-I-2c, MT2C, MT2BL, OsMT2C, OsMT2BL, MTE, OsMT2b1, OsMT2b2, MT2b1, MT2b2, MTb, met1, OsMTe, OsMT-I-2c, OsB22EL8, MTe, MT-I-2c, B22EL8","METALLOTHIONEIN2B","METALLOTHIONEIN2b, Metallothionein-like protein 2C, Class I metallothionein-like protein 2C, type 2 metallothionein b1, type 2 metallothionein b2, metallothionein 1",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0042594 - response to starvation, GO:0005829 - cytosol, GO:0060548 - negative regulation of cell death, GO:0046872 - metal ion binding",null,null,"Os05g0111300","LOC_Os05g02070.3, LOC_Os05g02070.2",null,"Os09g0415800","Os04g0583500",-1.083526,0]
[{"$nulls":24},"Os05g0515600","Os01g0919400","Os01g0919400",-3.0405064,0,null,"Os08g0485000",3.1329792,"Os04g0620700",-1.1026945,{"$nulls":29},"qRL-1(t) (QRl1)","qRL-1(t) (QRl1)","rhizome length (QTL)-1(t)","rhizome length (QTL)-1(t)",1," Vegetative organ - Culm",{"$nulls":12},"IQM2","OsSTA91, OsIQM2","IQ MOTIF CONTAINING PROTEIN 2","IQ motif containing protein 2",3," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0005829 - cytosol, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000095 - osmotic response sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance","PO:0009066 - anther ","Os03g0167200","LOC_Os03g07110.1, LOC_Os03g07110.2, LOC_Os03g07110.3",{"$nulls":6},"_","PEG1, OsPEG1","_","paternally expressed gene1",1," Biochemical character,  Reproductive organ,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0031418 - L-ascorbic acid binding, GO:0005506 - iron ion binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","TO:0000391 - seed size, TO:0000304 - seed thickness, TO:0000696 - starch content","PO:0009089 - endosperm , PO:0000084 - plant sperm cell ","Os01g0180900 ","LOC_Os01g08570.1",{"$nulls":6},"NAC1","OsNAC1, ONAC027, ONAC27, NAC27, OMTN1, OsNAC1/ONAC027, DLN60, OsDLN60, OsORE1","NAC DOMAIN-CONTAINING PROTEIN 1","NAC domain-containing protein 027, NAC domain-containing protein 27, Oryza miR164-targeted NAC1, miR164-targeted NAC1, DLN repressor 60, DLN motif protein 60",2," Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0005634 - nucleus, GO:0006350 - transcription","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance",null,"Os02g0579000 ","LOC_Os02g36880.4, LOC_Os02g36880.3, LOC_Os02g36880.2, LOC_Os02g36880.1",null,"Os04g0206700","Os01g0686800",-1.0854622,0]
[{"$nulls":24},"Os07g0549600","Os08g0485400","Os08g0485400",-3.226238,0,null,"Os05g0455700",3.132274,"Os05g0165400",-1.1022216,{"$nulls":29},"qRL-6(t) (QRl6)","qRL-6(t) (QRl6)","rhizome length (QTL)-6(t)","rhizome length (QTL)-6(t)",6," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA92","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0176800","LOC_Os03g07970.1",{"$nulls":6},"MATE34","OsMATE34","MULTIDRUG AND TOXIC COMPOUND EXTRUSION 34","multidrug and toxic compound extrusion 34",8," Biochemical character,  Coloration - Anthocyanin,  Seed - Morphological traits","GO:0005773 - vacuole, GO:0016021 - integral to membrane, GO:0006855 - multidrug transport, GO:0015238 - drug transporter activity, GO:0015297 - antiporter activity, GO:0009790 - embryonic development, GO:0005886 - plasma membrane","TO:0000071 - anthocyanin content",null,"Os08g0562800","LOC_Os08g44870.1, LOC_Os08g44870.2, LOC_Os08g44870.3",{"$nulls":6},"NAC2","OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2, DLN113, OsDLN113","NAC DOMAIN-CONTAINING PROTEIN 2","NAC domain-containing protein 004, NAC domain-containing protein 4, NAC domain-containing protein 34, NAC domain-containing protein 58, miR164-targeted NAC2, Oryza miR164-targeted NAC2, Oryza sativa tillering1, ORESARA 1.2, DLN repressor 113, DLN motif protein 113",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination,  Other","GO:0006970 - response to osmotic stress, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0005634 - nucleus, GO:0048573 - photoperiodism, flowering, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0009733 - response to auxin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009740 - gibberellic acid mediated signaling, GO:0009723 - response to ethylene stimulus, GO:0006350 - transcription, GO:0010150 - leaf senescence, GO:0010365 - positive regulation of ethylene biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0010187 - negative regulation of seed germination, GO:0010029 - regulation of seed germination, GO:0010942 - positive regulation of cell death, GO:0080036 - regulation of cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0010928 - regulation of auxin mediated signaling pathway, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0000173 - ethylene sensitivity, TO:0000276 - drought tolerance, TO:0000017 - anatomy and morphology related trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0002768 - spikelet length, TO:0000656 - root development trait, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000227 - root length, TO:0000567 - tiller angle, TO:0002685 - crown root number, TO:0002660 - cytokinin content, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000145 - internode length, TO:0000095 - osmotic response sensitivity, TO:0000396 - grain yield, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0002759 - grain number, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000450 - grain yield per panicle","PO:0007045 - coleoptile emergence stage , PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage , PO:0000025 - root tip , PO:0000043 - crown root , PO:0005029 - root primordium , PO:0020121 - lateral root ","Os04g0460600","LOC_Os04g38720.1",null,"Os03g0151800","Os04g0520700",-1.087243,0]
[{"$nulls":24},"Os01g0819100","Os11g0155600","Os11g0155600",-3.252697,0,null,"Os06g0610800",3.1316576,"Os03g0156700",-1.1017166,{"$nulls":29},"qRL-7(t) (QRl7)","qRL-7(t) (QRl7)","rhizome length (QTL)-7(t)","rhizome length (QTL)-7(t)",7," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA93","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0191800","LOC_Os03g09160.1",{"$nulls":6},"_",null,"_",null,7," Seed - Morphological traits - Grain shape",{"$nulls":3},"Os07g0565500","LOC_Os07g37820.1",{"$nulls":6},"NAC8","OsNAC8, ONAC074, ONAC74, NAC74, OsNAC8/ONAC074, OsNTL3, NTL3","NAC DOMAIN-CONTAINING PROTEIN 8","OsNAC8 protein, NAC domain-containing protein 8, NAC domain-containing protein 074, NAC domain-containing protein 74, NAC membrane-bound transcription factor 3, NAC MTF3",1," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0048366 - leaf development, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0034976 - response to endoplasmic reticulum stress, GO:0005886 - plasma membrane, GO:0045449 - regulation of transcription, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000655 - leaf development trait","PO:0001050 - leaf development stage ","Os01g0261200","LOC_Os01g15640.1",null,"Os11g0151300","Os04g0574700",-1.0882174,0]
[{"$nulls":24},"Os10g0544200","Os02g0106100","Os02g0106100",-3.254226,0,null,"Os06g0664200",3.1257572,"Os02g0826500",-1.0999418,{"$nulls":29},"qRBD-2(t) (QRbd2)","qRBD-2(t) (QRbd2)","rhizome branching degree (QTL)-2(t)","rhizome branching degree (QTL)-2(t)",2," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA94","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os03g10550",{"$nulls":6},"_",null,"_",null,7," Seed - Morphological traits - Grain shape",null,"TO:0002730 - grain shape",null,"Os07g0577750","LOC_Os07g38980.1",{"$nulls":6},"NAM","OsNAM, OMTN5, ONAC092, ONAC92, NAC92, CUC2, OsNAM/CUC2, DLN165, OsDLN165, OsCUC1, CUC1, OsNAM/ OMTN5, OsNAM1, NAM1","NO APICAL MERISTEM","no apical meristem, Petunia NO APICAL MERISTEM ortholog, miR164-targeted NAC5, Oryza miR164-targeted NAC5, NAC domain-containing protein 092, NAC domain-containing protein 92, DLN repressor 165, DLN motif protein 165, CUP-SHAPED COTYLEDON 1",6," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048497 - maintenance of floral organ identity, GO:0048508 - embryonic meristem development, GO:0010492 - maintenance of shoot apical meristem identity, GO:0010199 - organ boundary specification between lateral organs and the meristem, GO:0048437 - floral organ development, GO:0048366 - leaf development, GO:0010229 - inflorescence development, GO:0009791 - post-embryonic development, GO:0010093 - specification of floral organ identity, GO:0045449 - regulation of transcription, GO:0048507 - meristem development, GO:0009790 - embryonic development, GO:0003677 - DNA binding, GO:0010450 - inflorescence meristem growth, GO:0005634 - nucleus","TO:0000655 - leaf development trait, TO:0000050 - inflorescence branching, TO:0020034 - glume width, TO:0000215 - stamen anatomy and morphology trait, TO:0006022 - floral organ development trait, TO:0000437 - male sterility, TO:0000135 - leaf length, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000670 - floret number, TO:0000040 - panicle length, TO:0006019 - floral organ identity, TO:0000547 - primary branch number, TO:0000225 - stamen number, TO:0006038 - floral organ number, TO:0000557 - secondary branch number, TO:0006020 - shoot apical meristem development, TO:0000274 - floret anatomy and morphology trait, TO:0000145 - internode length, TO:0000621 - inflorescence development trait, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0006016 - meristem tissue development trait, TO:0006010 - lodicule number, TO:0002689 - leaf sheath length, TO:0006032 - panicle size","PO:0005020 - vascular bundle , PO:0009005 - root , PO:0020148 - shoot apical meristem , PO:0025034 - leaf , PO:0009055 - bract , PO:0020103 - flag leaf , PO:0009029 - stamen , PO:0025082 - reproductive shoot system , PO:0009030 - carpel , PO:0009038 - palea , PO:0009037 - lemma , PO:0025585 - floral organ formation stage , PO:0001050 - leaf development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009082 - spikelet floret , PO:0009010 - seed , PO:0020033 - coleoptile , PO:0025142 - leaf tip ","Os06g0344900","LOC_Os06g23650.1",null,"Os06g0319700","Os02g0579600",-1.0919329,0]
[{"$nulls":24},"Os09g0451000","Os06g0476200","Os06g0476200",-3.3784473,0,null,"Os01g0908600",3.1244538,"Os04g0445600",-1.0994588,{"$nulls":29},"GID2","gid2, GF14e, OsGF14e, OsGID2, 14-3-3e","GIBBERELLIN-INSENSITIVE DWARF 2","gibberellin-insensitive dwarf2, GIBBERELLIN INSENSITIVE DWARF2, GA-insensitive dwarf 2, F-box protein GID2, Gibberellin-insensitive dwarf protein 2, Protein GIBBERELLIN INSENSITIVE DWARF2, G-box factor 14-3-3e protein",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009615 - response to virus, GO:0019005 - SCF ubiquitin ligase complex, GO:0010265 - SCF complex assembly, GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0031348 - negative regulation of defense response, GO:0060548 - negative regulation of cell death, GO:0007126 - meiosis, GO:0009937 - regulation of gibberellic acid mediated signaling","TO:0000255 - sheath blight disease resistance, TO:0000370 - leaf width, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000299 - leaf lamina color, TO:0000276 - drought tolerance, TO:0000148 - viral disease resistance, TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000605 - hydrogen peroxide content","PO:0020122 - inflorescence axis , PO:0000037 - shoot apex , PO:0009082 - spikelet floret , PO:0009005 - root , PO:0020039 - leaf lamina , PO:0020104 - leaf sheath ","Os02g0580300","LOC_Os02g36974.6, LOC_Os02g36974.5, LOC_Os02g36974.4, LOC_Os02g36974.3, LOC_Os02g36974.2, LOC_Os02g36974.1",{"$nulls":7},"_","OsSTA95","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os03g16840",{"$nulls":6},"_",null,"_",null,7," Seed - Morphological traits - Grain shape",null,"TO:0002730 - grain shape",null,null,"LOC_Os07g41000",{"$nulls":6},"NAR2.1","OsNAR2.1, OsNRT3.1A","ACTIVATOR FOR NRT2","activator for NRT2, high-affinity nitrate transporter-activating element 2.1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0042128 - nitrate assimilation, GO:0009610 - response to symbiotic fungus, GO:0015112 - nitrate transmembrane transporter activity, GO:0009611 - response to wounding, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0019740 - nitrogen utilization","TO:0000455 - seed set percent, TO:0001017 - water use efficiency, TO:0001015 - photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000276 - drought tolerance, TO:0000078 - root dry weight, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0001013 - lateral root number, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000543 - leaf nitrogen content, TO:0000136 - relative water content",null,"Os02g0595900","LOC_Os02g38230.1",null,"Os07g0229900","Os04g0508300",-1.0954713,0]
[{"$nulls":24},"Os08g0101700","Os11g0490100","Os11g0490100",-3.4442463,0,null,"Os08g0402700",3.1227598,"Os01g0306900",-1.0988183,{"$nulls":29},"qLEI-3 (qLEI 3)","qLEI-3 (qLEI 3)","lowest elongated internode (QTL)-3","lowest elongated internode (QTL)-3",3," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA96","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0281100","LOC_Os03g17250.1",{"$nulls":6},"_",null,"_",null,7," Seed - Morphological traits - Grain shape",null,"TO:0002730 - grain shape",null,"Os07g0602100","LOC_Os07g41080.1",{"$nulls":6},"NRAMP1","OsNramp1, OsNRAMP1, OsNramp6","BACTERIOCIDE EFFECT 1","homologues of mammalian Nramp1 gene, Natural resistance-associated macrophage protein 1",7," Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0055073 - cadmium ion homeostasis, GO:0006828 - manganese ion transport, GO:0010039 - response to iron ion, GO:0046686 - response to cadmium ion, GO:0009609 - response to symbiotic bacterium, GO:0030001 - metal ion transport, GO:0005381 - iron ion transmembrane transporter activity, GO:0015691 - cadmium ion transport, GO:0016021 - integral to membrane, GO:0055072 - iron ion homeostasis, GO:0055071 - manganese ion homeostasis, GO:0005886 - plasma membrane","TO:0000224 - iron sensitivity","PO:0005421 - parenchyma , PO:0020141 - stem node , PO:0020104 - leaf sheath , PO:0005645 - leaf mesophyll , PO:0025034 - leaf , PO:0000252 - endodermis , PO:0006203 - pericycle , PO:0009005 - root ","Os07g0258400","LOC_Os07g15460.2, LOC_Os07g15460.1",null,"Os01g0220300","Os10g0370100",-1.0965024,0]
[{"$nulls":24},"Os05g0567300","Os11g0600900","Os11g0600900",-3.5156631,0,null,"Os05g0217800",3.1225374,"Os01g0511300",-1.0987902,{"$nulls":29},"qLEI-12 (qLEI 12)","qLEI-12 (qLEI 12)","lowest elongated internode (QTL)-12","lowest elongated internode (QTL)-12",12," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA100","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0355500","LOC_Os03g23940.1",{"$nulls":6},"_",null,"_",null,7," Seed - Morphological traits - Grain shape",{"$nulls":3},"Os07g0557601","LOC_Os07g37150.1",{"$nulls":6},"NRAMP2","OsNramp2, OsNRAMP2","BACTERIOCIDE EFFECT 2","homologues of mammalian Nramp2 gene",3," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0055072 - iron ion homeostasis, GO:0006537 - glutamate biosynthetic process, GO:0009094 - L-phenylalanine biosynthetic process, GO:0009088 - threonine biosynthetic process, GO:0006811 - ion transport, GO:0006523 - alanine biosynthetic process, GO:0009751 - response to salicylic acid stimulus, GO:0005215 - transporter activity, GO:0010033 - response to organic substance, GO:0016021 - integral to membrane, GO:0030001 - metal ion transport, GO:0046686 - response to cadmium ion, GO:0009705 - plant-type vacuole membrane, GO:0015086 - cadmium ion transmembrane transporter activity, GO:0005384 - manganese ion transmembrane transporter activity","TO:0002673 - amino acid content, TO:0000401 - plant growth hormone sensitivity","PO:0025034 - leaf ","Os03g0208500","LOC_Os03g11010.1",null,"Os06g0683400","Os03g0666100",-1.1007951,0]
[{"$nulls":24},"Os03g0299900","Os12g0567800","Os12g0567800",-3.6087656,0,null,"Os07g0289800",3.1181002,"Os11g0143300",-1.0985559,{"$nulls":29},"qRIE-1 (qRIE 1)","qRIE-1 (qRIE 1)","rate of internodal elongation (QTL)-1","rate of internodal elongation (QTL)-1",1," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA101","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0371000","LOC_Os03g25490.1, LOC_Os03g25490.2",{"$nulls":6},"SPARK8","OsSPARK8","SIMILAR PROTEIN TO ARK 8",null,7," Seed - Morphological traits - Grain shape","GO:0046658 - anchored to plasma membrane",null,null,"Os07g0557700","LOC_Os07g37156.1",{"$nulls":6},"NRAMP3","OsNramp3, OsNRAMP3","BACTERIOCIDE EFFECT 3","homologues of mammalian Nramp3 gene, Integral membrane protein OsNramp3",6," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010033 - response to organic substance, GO:0016021 - integral to membrane, GO:0055072 - iron ion homeostasis, GO:0009088 - threonine biosynthetic process, GO:0006523 - alanine biosynthetic process, GO:0005215 - transporter activity, GO:0016020 - membrane, GO:0046686 - response to cadmium ion, GO:0030001 - metal ion transport, GO:0009094 - L-phenylalanine biosynthetic process, GO:0006537 - glutamate biosynthetic process","TO:0002673 - amino acid content","PO:0025034 - leaf ","Os06g0676000","LOC_Os06g46310.1, LOC_Os06g46310.2, LOC_Os06g46310.3",null,"Os07g0174200","Os11g0225300",-1.1049231,0]
[{"$nulls":24},"Os04g0682300","Os06g0586000","Os06g0586000",-3.7205493,0,null,"Os08g0442700",3.1167004,"Os03g0714100",-1.0980163,{"$nulls":29},"qRIE-12 (qRIE 12)","qRIE-12 (qRIE 12)","rate of internodal elongation (QTL)-12","rate of internodal elongation (QTL)-12",12," Vegetative organ - Culm",{"$nulls":12},"_","OsSTA103","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os03g27200",{"$nulls":6},"_",null,"_",null,3," Seed - Morphological traits - Grain shape",null,"TO:0000734 - grain length",null,"Os03g0410500","LOC_Os03g29710.1",{"$nulls":6},"NRT1","OsNRT1, OsNRT1;1, OsNRT1.1, OsNRT1.1a, OsNRT1.1b, NRT1.1, NRT1.1a, NRT1.1b, OsNPF8.9, NPF8.9, OsNRT1.1B","NITRATE TRANSPORTER 1","nitrate transporter gene 1, NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 8.9, PTR2-like gene",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009610 - response to symbiotic fungus, GO:0009620 - response to fungus, GO:0005215 - transporter activity, GO:0015103 - inorganic anion transmembrane transporter activity, GO:0016020 - membrane, GO:0042594 - response to starvation, GO:0010167 - response to nitrate",null,"PO:0009005 - root ","Os03g0235900","LOC_Os03g13274.3, LOC_Os03g13274.2, LOC_Os03g13274.4, LOC_Os03g13274.1",null,"Os07g0163000","Os06g0173100",-1.1070808,0]
[{"$nulls":24},"Os03g0123500","Os01g0179600","Os01g0179600",-3.825757,0,null,"Os08g0561700",3.1164343,"Os05g0392700",-1.0978266,{"$nulls":29},"TPC1","OsTPC1, Tpc1, OsCC1, OsCL1 pore","TWO-PORE CHANNEL 1","Two pore calcium channel protein 1, Two-pore channel 1, Voltage-dependent calcium channel protein TPC1",1," Biochemical character,  Vegetative organ - Culm","GO:0032940 - secretion by cell, GO:0005244 - voltage-gated ion channel activity, GO:0005509 - calcium ion binding, GO:0005262 - calcium channel activity, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0005739 - mitochondrion, GO:0005216 - ion channel activity, GO:0005245 - voltage-gated calcium channel activity, GO:0055085 - transmembrane transport, GO:0006952 - defense response, GO:0006811 - ion transport, GO:0006812 - cation transport, GO:0005261 - cation channel activity, GO:0009626 - plant-type hypersensitive response, GO:0005886 - plasma membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0006816 - calcium ion transport","TO:0000207 - plant height",null,"Os01g0678500","LOC_Os01g48680.1, LOC_Os01g48680.2",{"$nulls":7},"_","OsSTA104","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0612400","LOC_Os03g41600.1",{"$nulls":6},"_",null,"_",null,3," Seed - Morphological traits - Grain shape","GO:0009535 - chloroplast thylakoid membrane","TO:0000734 - grain length",null,"Os03g0410700","LOC_Os03g29730.1",{"$nulls":6},"NRT2.1","OsNRT2.1, OsNRT2.2","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.1",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0009926 - auxin polar transport, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0015112 - nitrate transmembrane transporter activity, GO:0009415 - response to water, GO:0010618 - aerenchyma formation, GO:0010167 - response to nitrate, GO:0009693 - ethylene biosynthetic process","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000586 - seminal root length, TO:0000237 - water stress trait, TO:0000457 - total biomass yield, TO:0000346 - tiller number, TO:0000276 - drought tolerance",null,"Os02g0112100 ","LOC_Os02g02170.1",null,"Os11g0695000","Os06g0231300",-1.1110073,0]
[{"$nulls":24},"Os12g0169600","Os05g0572000","Os05g0572000",-3.9512386,0,null,"Os07g0555100",3.1155903,"Os09g0536700",-1.097448,{"$nulls":29},"MADS18","OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28","MADS BOX GENE 18","MADS box gene18, MADS-box transcription factor 18, MADS-box protein 2, MADS-box protein 28",7," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0048830 - adventitious root development, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0005515 - protein binding, GO:0045449 - regulation of transcription, GO:0010029 - regulation of seed germination, GO:0043565 - sequence-specific DNA binding, GO:0010228 - vegetative to reproductive phase transition, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0030154 - cell differentiation, GO:0010093 - specification of floral organ identity, GO:0009908 - flower development, GO:0005886 - plasma membrane","TO:0002616 - flowering time, TO:0000430 - germination rate, TO:0000266 - chalky endosperm, TO:0000207 - plant height, TO:0000622 - flower development trait, TO:0000576 - stem length, TO:0000615 - abscisic acid sensitivity, TO:0006032 - panicle size, TO:0000180 - spikelet fertility, TO:0000145 - internode length, TO:0000346 - tiller number","PO:0000042 - shoot-borne root , PO:0006215 - leaf aerenchyma , PO:0009082 - spikelet floret , PO:0000229 - flower meristem , PO:0009001 - fruit , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009047 - stem , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0007057 - 0 seed germination stage , PO:0007615 - flower development stage ","Os07g0605200","LOC_Os07g41370.2, LOC_Os07g41370.1",{"$nulls":7},"B3DNA","OsSTA105, OsB3DNA","B3 DNA BINDING DOMAIN PROTEIN","B3 DNA binding domain",3," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0003677 - DNA binding",null,"PO:0009066 - anther ","Os03g0620500","LOC_Os03g42290.1",{"$nulls":6},"S40-7","OsS40-7","S40 PROTEIN 7","S40 protein 7",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010233 - phloem transport, GO:0005737 - cytoplasm, GO:0009651 - response to salt stress","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000590 - grain weight, TO:0000466 - carbon content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0009005 - root ","Os01g0727500 ","LOC_Os01g52730.1",{"$nulls":6},"NRT2.2","OsNRT2.2, OsNRT2.1","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010167 - response to nitrate, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0015112 - nitrate transmembrane transporter activity","TO:0000276 - drought tolerance",null,"Os02g0112600","LOC_Os02g02190.1",null,"Os11g0104900","Os05g0164800",-1.1115484,0]
[{"$nulls":24},"Os12g0189400","Os02g0783700","Os02g0783700",-4.0521126,0,null,"Os01g0201900",3.1145117,"Os03g0296300",-1.096938,{"$nulls":29},"MADS23","OsMADS23, MADS-23","MADS BOX GENE 23","MADS box gene23, MADS-box transcription factor 23",8," Vegetative organ - Culm,  Vegetative organ - Root,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0006979 - response to oxidative stress, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006995 - cellular response to nitrogen starvation, GO:0043565 - sequence-specific DNA binding, GO:0051607 - defense response to virus, GO:0048364 - root development, GO:0009742 - brassinosteroid mediated signaling, GO:0010423 - negative regulation of brassinosteroid biosynthetic process, GO:0060359 - response to ammonium ion, GO:0048367 - shoot development, GO:0010029 - regulation of seed germination, GO:0010118 - stomatal movement, GO:0006561 - proline biosynthetic process, GO:0010116 - positive regulation of abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0002657 - oxidative stress, TO:0000495 - chlorophyll content, TO:0002667 - abscisic acid content, TO:0000654 - shoot development trait, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000615 - abscisic acid sensitivity, TO:0000168 - abiotic stress trait, TO:0000227 - root length, TO:0000276 - drought tolerance, TO:0000656 - root development trait, TO:0002676 - brassinosteroid content, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000148 - viral disease resistance","PO:0025527 - shoot system development stage , PO:0007057 - 0 seed germination stage , PO:0007520 - root development stage , PO:0009005 - root ","Os08g0431900","LOC_Os08g33488.1",{"$nulls":7},"_","OsSTA106, STA106","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0632732","LOC_Os03g43350.1",{"$nulls":6},"S40-12","OsS40-12","S40 PROTEIN 12","S40 protein 12",11," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0009646 - response to absence of light, GO:0009507 - chloroplast, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0050832 - defense response to fungus","TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000249 - leaf senescence, TO:0000011 - nitrogen sensitivity, TO:0000460 - light intensity sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000466 - carbon content","PO:0025034 - leaf , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage ","Os11g0154300","LOC_Os11g05600.1",{"$nulls":6},"NRT2.3","OsNRT2.3, OsNRT2;1, OsNRT2.3a, OsNRT2.3b, OsNRT2;3a, OsNRT2.5","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.3",1," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0015112 - nitrate transmembrane transporter activity, GO:0009620 - response to fungus, GO:0055085 - transmembrane transport, GO:0009268 - response to pH, GO:0016021 - integral to membrane, GO:0019740 - nitrogen utilization, GO:0007165 - signal transduction, GO:0009610 - response to symbiotic fungus, GO:0006885 - regulation of pH, GO:0070482 - response to oxygen levels, GO:0005886 - plasma membrane, GO:0009413 - response to flooding","TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000511 - phosphorus uptake, TO:0000396 - grain yield, TO:0000113 - giant embryo, TO:0000015 - oxygen sensitivity, TO:0000445 - seed number, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0006032 - panicle size","PO:0025034 - leaf , PO:0009005 - root , PO:0005417 - phloem ","Os01g0704100 ","LOC_Os01g50820.1",null,"Os03g0710800","Os12g0116600",-1.1165165,0]
[{"$nulls":24},"Os09g0327400","Os10g0528100","Os10g0528100",-4.0861135,0,null,"Os07g0694400",3.114006,"Os06g0300800",-1.0962677,{"$nulls":29},"GNP1","GA20OX1, OsGA20ox1, 20ox1, GA20ox-1, ga20ox1, Os20ox, C20OX2, OsGA20ox2, OsGA20ox-1, GA20ox1, OsGNP1","GRAIN NUMBER PER PANICLE 1","GIBBERELLIN 20-OXIDASE 1, rice GA 20-oxidase1, GA 20-oxidase1, Gibberellin 20 oxidase 1, Gibberellin C-20 oxidase 1, GA 20-oxidase 1, GA20 oxidase-1, GA 20-oxidase 1, GA20 oxidase, Gibberellin C-20 oxidase, Grain Number per Panicle1",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009686 - gibberellin biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0006970 - response to osmotic stress, GO:0005506 - iron ion binding, GO:0009685 - gibberellin metabolic process, GO:0055114 - oxidation reduction, GO:0010336 - gibberellic acid homeostasis","TO:0000397 - grain size, TO:0000291 - carbohydrate content, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000557 - secondary branch number, TO:0000599 - enzyme activity, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000590 - grain weight, TO:0000095 - osmotic response sensitivity, TO:0000357 - growth and development trait, TO:0000455 - seed set percent, TO:0000396 - grain yield","PO:0000230 - inflorescence meristem , PO:0020148 - shoot apical meristem ","Os03g0856700","LOC_Os03g63970.1",{"$nulls":7},"_","OsSTA108","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0661500","LOC_Os03g45930.1",{"$nulls":6},"S40-13","OsS40-13","S40 PROTEIN 13","S40 protein 13",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0010150 - leaf senescence, GO:0009507 - chloroplast, GO:0050832 - defense response to fungus, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000346 - tiller number, TO:0000590 - grain weight, TO:0000466 - carbon content, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000207 - plant height","PO:0025034 - leaf , PO:0009010 - seed , PO:0009005 - root , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0020148 - shoot apical meristem ","Os04g0520700","LOC_Os04g43990.1",{"$nulls":6},"NRT2.4","OsNRT2.4","HIGH AFFINITY NITRATE TRANSPORTER","high-affinity nitrate transporter 2.4",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0015112 - nitrate transmembrane transporter activity, GO:0042594 - response to starvation, GO:0060359 - response to ammonium ion, GO:0048367 - shoot development, GO:0010167 - response to nitrate, GO:0048527 - lateral root development, GO:0009733 - response to auxin stimulus","TO:0000011 - nitrogen sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0001013 - lateral root number, TO:0001012 - lateral root length, TO:0000163 - auxin sensitivity, TO:0000654 - shoot development trait","PO:0000016 - lateral root primordium , PO:0025205 - shoot system vascular system , PO:0009006 - shoot system ","Os01g0547600","LOC_Os01g36720.1",null,"Os10g0545700","Os03g0185600",-1.1201382,0]
[{"$nulls":24},"Os02g0510600","Os01g0532300","Os01g0532300",-4.103605,0,null,"Os05g0361900",3.113944,"Os09g0482600",-1.0954514,{"$nulls":29},"BC15","OsCTL1, CHIT13, OsCHIT13","BRITTLE CULM 15","brittle culm15, BRITTLE CULM15, brittle, culm-15, chitinase-like1, chitinase-like 1, chitinase 13",9," Vegetative organ - Culm","GO:0004568 - chitinase activity, GO:0010053 - root epidermal cell differentiation, GO:0005886 - plasma membrane, GO:0006032 - chitin catabolic process, GO:0009809 - lignin biosynthetic process, GO:0016998 - cell wall macromolecule catabolic process, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0005975 - carbohydrate metabolic process, GO:0009735 - response to cytokinin stimulus, GO:0010337 - regulation of salicylic acid metabolic process, GO:0043255 - regulation of carbohydrate biosynthetic process, GO:0009825 - multidimensional cell growth",null,null,"Os09g0494200","LOC_Os09g32080.2, LOC_Os09g32080.1",{"$nulls":7},"_","OsSTA109","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0673600","LOC_Os03g47050.1",{"$nulls":6},"S40-14","OsS40-14","S40 PROTEIN 14","S40 protein 14",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0010233 - phloem transport, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0009733 - response to auxin stimulus, GO:0009646 - response to absence of light","TO:0000249 - leaf senescence, TO:0000466 - carbon content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0000276 - drought tolerance","PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0009010 - seed ","Os05g0531000","LOC_Os05g45440.1",{"$nulls":6},"PHB1","OsPHB1","PROHIBITIN 1","prohibitin 1",4," Tolerance and resistance - Disease resistance","GO:0005743 - mitochondrial inner membrane, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0006952 - defense response",null,null,"Os04g0462900","LOC_Os04g38900.2, LOC_Os04g38900.1",null,"Os01g0718000","Os08g0500000",-1.1230694,0]
[{"$nulls":24},"Os11g0498600","Os10g0490800","Os10g0490800",-4.1116633,0,null,"Os09g0471300",3.113716,"Os05g0564400",-1.0946509,{"$nulls":29},"PDCD5","OsPDCD5","PROGRAMMED CELL DEATH 5","programmed cell death 5",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0012501 - programmed cell death, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0010600 - regulation of auxin biosynthetic process, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0003677 - DNA binding, GO:0009691 - cytokinin biosynthetic process, GO:0009734 - auxin mediated signaling pathway, GO:0009740 - gibberellic acid mediated signaling, GO:0009736 - cytokinin mediated signaling, GO:0009926 - auxin polar transport","TO:0002672 - auxin content, TO:0002660 - cytokinin content, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0002675 - gibberellic acid content, TO:0000089 - panicle type, TO:0002730 - grain shape, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000145 - internode length","PO:0009066 - anther , PO:0009039 - glume , PO:0009047 - stem , PO:0020142 - stem internode , PO:0025034 - leaf , PO:0005020 - vascular bundle , PO:0009005 - root ","Os05g0547850","LOC_Os05g47446.1, LOC_Os05g47446.2",{"$nulls":7},"THI37","OsSTA110, OsTHION37, THION37, OsTHI37","THIONIN 37",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0699950","LOC_Os03g49280.1",{"$nulls":6},"PLS2","RBP-59, OsPLS2, HeFP, OsHeFP","PREMATURE LEAF SENESCENCE 2","RNA-binding RBP-59, premature leaf senescence 2, helicase family protein",3," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Endosperm","GO:0010218 - response to far red light, GO:0046466 - membrane lipid catabolic process, GO:0003677 - DNA binding, GO:0004386 - helicase activity, GO:0005524 - ATP binding, GO:0009960 - endosperm development, GO:0051783 - regulation of nuclear division, GO:0010342 - cellularization of endosperm, GO:0031116 - positive regulation of microtubule polymerization, GO:0043014 - alpha-tubulin binding, GO:0048487 - beta-tubulin binding, GO:0007010 - cytoskeleton organization, GO:0003779 - actin binding, GO:0030276 - clathrin binding, GO:0042542 - response to hydrogen peroxide, GO:0009737 - response to abscisic acid stimulus, GO:0009416 - response to light stimulus, GO:0010150 - leaf senescence","TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000326 - leaf color, TO:0000615 - abscisic acid sensitivity, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0002667 - abscisic acid content, TO:0000455 - seed set percent, TO:0000249 - leaf senescence, TO:0000130 - far red light sensitivity, TO:0000063 - mimic response, TO:0000075 - light sensitivity","PO:0007633 - endosperm development stage , PO:0001054 - 4 leaf senescence stage ","Os03g0586900","LOC_Os03g38990.1",{"$nulls":6},"PIP1A","OsPIP1a, OsPIP1;1, PIP1a, RWC-1, PIP1-1, RWC1, OsPIP1-1, PIP1;1, PIP1-5","PLASMA MEMBRANE INTRINSIC PROTEIN 1A","Aquaporin PIP1-1, Plasma membrane intrinsic protein 1-1, Plasma membrane intrinsic protein 1a, Water channel protein RWC1, plasma membrane intrinsic protein 1-5",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0005215 - transporter activity, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0034021 - response to silicon dioxide, GO:0009414 - response to water deprivation, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0046686 - response to cadmium ion","TO:0000434 - root activity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000430 - germination rate","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage ","Os02g0666200","LOC_Os02g44630.3, LOC_Os02g44630.2, LOC_Os02g44630.1",null,"Os02g0819100","Os07g0623300",-1.1231333,0]
[{"$nulls":24},"Os02g0220400","Os01g0692100","Os01g0692100",-4.1570225,0,null,"Os12g0191500",3.1132698,"Os03g0269900",-1.0939747,{"$nulls":29},"LCRN1","OsSPL3, SPL3","LOWER CROWN ROOT NUMBER 1","Squamosa promoter-binding-like protein 3, SQUAMOSA Promoter-Binding Protein-Like 3, lower crown root number1",2," Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0010050 - vegetative phase change, GO:0008270 - zinc ion binding, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0048364 - root development, GO:0003677 - DNA binding, GO:0045449 - regulation of transcription","TO:0001013 - lateral root number, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000346 - tiller number","PO:0020127 - primary root , PO:0025197 - stele , PO:0000252 - endodermis , PO:0005427 - sclerenchyma , PO:0020123 - root cap , PO:0000025 - root tip , PO:0005679 - epidermis , PO:0005772 - exodermis ","Os02g0139400","LOC_Os02g04680.2, LOC_Os02g04680.1",{"$nulls":7},"_","OsSTA111","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0702900","LOC_Os03g49590.1",{"$nulls":6},"ALDH2B1  ","OsALDH2B1, OsALDH2b, ALDH2b","ALDEHYDE DEHYDROGENASE 2B1","Aldehyde dehydrogenase 2B1",6," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Other","GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005739 - mitochondrion, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009742 - brassinosteroid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0010229 - inflorescence development, GO:0016491 - oxidoreductase activity, GO:0004029 - aldehyde dehydrogenase (NAD) activity, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0009556 - microsporogenesis, GO:0048653 - anther development, GO:0051321 - meiotic cell cycle, GO:0048608 - reproductive structure development, GO:0009555 - pollen development","TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002668 - jasmonic acid content, TO:0000476 - growth hormone content, TO:0000040 - panicle length, TO:0002688 - leaf lamina joint bending, TO:0002759 - grain number, TO:0000207 - plant height, TO:0000437 - male sterility, TO:0000203 - bacterial leaf streak disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000172 - jasmonic acid sensitivity, TO:0002677 - brassinosteroid sensitivity","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0009066 - anther ","Os06g0270900","LOC_Os06g15990.1",{"$nulls":6},"PIP2A","OsPIP2a, PIP2-1, PIP2a, PIP2.1, OsPIP2;1, PIP2;1, OsPIP2-1","PLASMA MEMBRANE INTRINSIC PROTEIN 2A","Probable aquaporin PIP2-1, Plasma membrane intrinsic protein 2-1, Plasma membrane intrinsic protein 2a",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0006833 - water transport, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0005215 - transporter activity, GO:0009409 - response to cold, GO:0046686 - response to cadmium ion, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0034021 - response to silicon dioxide","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000394 - drought related trait","PO:0025034 - leaf ","Os07g0448800","LOC_Os07g26690.1, LOC_Os07g26690.2",null,"Os02g0314300","Os11g0114600",-1.1342384,0]
[{"$nulls":24},"Os03g0735000","Os11g0506800","Os11g0506800",-4.168722,0,null,"Os02g0450000",3.1121986,"Os11g0704700",-1.0936791,{"$nulls":29},"PAP10C","OsPAP10c","PURPLE ACID PHOSPHATASE 10C","purple acid phosphatase 10c",12," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0042594 - response to starvation, GO:0016036 - cellular response to phosphate starvation, GO:0009505 - plant-type cell wall, GO:0003993 - acid phosphatase activity","TO:0000346 - tiller number, TO:0000480 - nutrient sensitivity, TO:0000207 - plant height, TO:0000153 - relative yield, TO:0001034 - relative plant height","PO:0009005 - root , PO:0006036 - root epidermis ","Os12g0637100","LOC_Os12g44020.1, LOC_Os12g44020.2",{"$nulls":7},"_","OsSTA112","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0722000","LOC_Os03g51210.1",{"$nulls":6},"TDC3","OsTDC3, OsTDC5","TRYPTOPHAN DECARBOXYLASE 3","Trp decarboxylase 3",8," Biochemical character,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Stress tolerance","GO:0006520 - cellular amino acid metabolic process, GO:0042427 - serotonin biosynthetic process, GO:0009408 - response to heat, GO:0016831 - carboxy-lyase activity, GO:0009646 - response to absence of light, GO:0030170 - pyridoxal phosphate binding, GO:0009416 - response to light stimulus, GO:0007623 - circadian rhythm, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000075 - light sensitivity, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0002673 - amino acid content, TO:0000487 - endosperm color","PO:0009006 - shoot system , PO:0009049 - inflorescence , PO:0009005 - root ","Os08g0140500","LOC_Os08g04560.1",{"$nulls":6},"PPCK1","OsPPCK1","PHOSPHOENOL PYRUVATE CARBOXYLASE KINASE1","phosphoenol pyruvate carboxylase kinase1, phosphoenolpyruvate carboxylase kinase 1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004683 - calmodulin-dependent protein kinase activity, GO:0005524 - ATP binding, GO:0005515 - protein binding, GO:0005516 - calmodulin binding, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation, GO:0009738 - abscisic acid mediated signaling, GO:0009931 - calcium-dependent protein serine/threonine kinase activity, GO:0018105 - peptidyl-serine phosphorylation, GO:0046777 - protein amino acid autophosphorylation","TO:0000276 - drought tolerance",null,"Os02g0807000","LOC_Os02g56310.1",null,"Os05g0549100","Os03g0243300",-1.1360397,0]
[{"$nulls":24},"Os02g0810900","Os01g0963000","Os01g0963000",-4.1902757,0,null,"Os03g0290900",3.111882,"Os01g0142800",-1.0931097,{"$nulls":29},"PK1","OsPK1","PYRUVATE KINASE 1","pyruvate kinase 1",11," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0004743 - pyruvate kinase activity, GO:0009635 - response to herbicide, GO:0006096 - glycolysis, GO:0000287 - magnesium ion binding, GO:0046686 - response to cadmium ion, GO:0030955 - potassium ion binding","TO:0000058 - herbicide sensitivity",null,"Os11g0148500","LOC_Os11g05110.1, LOC_Os11g05110.2, LOC_Os11g05110.3",{"$nulls":7},"_","OsSTA113","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0729800","LOC_Os03g51990.1",{"$nulls":6},"GGC2","OsGGC2","_","G gamma subunit GGC2",8," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000397 - grain size, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000567 - tiller angle, TO:0000303 - cold tolerance, TO:0000455 - seed set percent, TO:0006001 - salt tolerance, TO:0000346 - tiller number",null,"Os08g0456600",{"$nulls":7},"PPCK2","OsPPCK2, OsPPCK2L, OsPPCK2S","PHOSPHOENOL PYRUVATE CARBOXYLASE KINASE2","phosphoenol pyruvate carboxylase kinase2, phosphoenolpyruvate carboxylase kinase 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005515 - protein binding, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0006468 - protein amino acid phosphorylation","TO:0000276 - drought tolerance",null,"Os02g0625300","LOC_Os02g41580.1",null,"Os03g0200500","Os03g0136900",-1.1374594,0]
[{"$nulls":24},"Os04g0177400","Os02g0580500","Os02g0580500",-4.25207,0,null,"Os07g0617100",3.1086721,"Os06g0720000",-1.0925282,{"$nulls":29},"SUI1","OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1","SHORTENED UPPERMOST INTERNODE 1","Shortened Uppermost Internode 1, Phosphatidylserine Synthase 1",1," Biochemical character,  Vegetative organ - Culm","GO:0017157 - regulation of exocytosis, GO:0006892 - post-Golgi vesicle-mediated transport, GO:0001558 - regulation of cell growth, GO:0006659 - phosphatidylserine biosynthetic process, GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity, GO:0005789 - endoplasmic reticulum membrane, GO:0006644 - phospholipid metabolic process, GO:0006646 - phosphatidylethanolamine biosynthetic process, GO:0016021 - integral to membrane, GO:0019827 - stem cell maintenance, GO:0048831 - regulation of shoot development, GO:0080006 - internode patterning","TO:0002641 - acid detergent fiber, TO:0000397 - grain size, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000300 - glucose content, TO:0000040 - panicle length, TO:0000420 - fertility related trait, TO:0000145 - internode length","PO:0005005 - shoot internode , PO:0007089 - stem elongation stage ","Os01g0118300","LOC_Os01g02890.1",{"$nulls":7},"_","OsSTA114","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0745700","LOC_Os03g53410.1",{"$nulls":6},"PSL1","OsPGL13, PGL13, OsPSL1, OsPG1, PG1, LTN-212","PHOTO-SENSITIVE LEAF ROLLING 1","Polygalacturonases-Like 13, PG-like 13, leaf tip necrosis 212, Polygalacturonase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004650 - polygalacturonase activity, GO:0005576 - extracellular region, GO:0005975 - carbohydrate metabolic process, GO:0070265 - necrotic cell death, GO:0009414 - response to water deprivation, GO:0052386 - cell wall thickening, GO:0045490 - pectin catabolic process, GO:0009642 - response to light intensity, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000040 - panicle length, TO:0000605 - hydrogen peroxide content, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0000085 - leaf rolling, TO:0000276 - drought tolerance, TO:0000441 - humidity related trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0296200","LOC_Os01g19170.1",{"$nulls":6},"TPP1","OsTPP1, OsTPS, TPP","TREHALOSE-6-PHOSPHATE PHOSHPHATASE 1","Trehalose-6-phosphate phosphatase 1, trehalose 6-P synthase",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0005992 - trehalose biosynthetic process, GO:0009651 - response to salt stress, GO:0004805 - trehalose-phosphatase activity, GO:0006970 - response to osmotic stress, GO:0009409 - response to cold, GO:0070415 - trehalose metabolism in response to cold stress, GO:0042542 - response to hydrogen peroxide","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000114 - flooding related trait, TO:0000095 - osmotic response sensitivity, TO:0006003 - oligosaccharide content",null,"Os02g0661100","LOC_Os02g44230.1, LOC_Os02g44230.2, LOC_Os02g44230.4, LOC_Os02g44235.1, LOC_Os02g44230.3",null,"Os05g0148700","Os12g0479400",-1.1378107,0]
[{"$nulls":24},"Os07g0679300","Os06g0216200","Os06g0216200",-4.2638373,0,null,"Os06g0196500",3.1065948,"Os09g0542000",-1.0918126,{"$nulls":29},"NAC31","ONAC031, ONAC31, OsSWN3","NAC DOMAIN-CONTAINING PROTEIN 31","NAC domain-containing protein 031, NAC domain-containing protein 31, secondary wall NAC transcription factor 3, secondary wall-associated NAC 3, SECONDARY WALL NAC DOMAIN PROTEIN 3",8," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Other","GO:0010089 - xylem development, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009834 - secondary cell wall biogenesis, GO:0030308 - negative regulation of cell growth, GO:0009735 - response to cytokinin stimulus, GO:0080006 - internode patterning, GO:0009737 - response to abscisic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os08g0103900 ","LOC_Os08g01330.1",{"$nulls":7},"_","OsSTA115","_",null,3," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os03g0796400","LOC_Os03g58190.1",{"$nulls":6},"GS7",null,"GRAIN SHAPE 7","grain shape 7, GRAIN SHAPE ON CHROMOSOME 7",7," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0002730 - grain shape, TO:0000382 - 1000-seed weight, TO:0000734 - grain length",{"$nulls":9},"PR1A","OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP, OsPR1, OsPR1b","PATHOGENESIS-RELATED GENE 1A","pathogenesis-related gene 1a, acidic PR protein 1, PR protein 1, acidic pathogenesis-related protein 1, pathogenesis-related 1a protein, Sperm Coating Protein",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0006979 - response to oxidative stress, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0080134 - regulation of response to stress, GO:0005576 - extracellular region, GO:0009863 - salicylic acid mediated signaling pathway, GO:0006950 - response to stress, GO:0009751 - response to salicylic acid stimulus","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000031 - silicon sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0129200","LOC_Os07g03710.1",null,"Os08g0559400","Os08g0323700",-1.1379477,0]
[{"$nulls":24},"Os05g0555300","Os09g0421700","Os09g0421700",-4.4692326,0,null,"Os06g0203200",3.1043072,"Os01g0140500",-1.0917116,{"$nulls":29},"_","OsSERK1, OsBAK1, OsSERK1/OsBAK1, OsBISERK1, OsSerk1, OsBAK1-1, 08SG2/OsBAK1, 08SG2, SG2","_","somatic embryogenesis receptor-like kinase 1, somatic embryogenesis receptor kinase 1, BRI1-associated receptor kinase 1, BTH-induced SERK1, benzothiadiazole-induced SERK1, bri1-associated receptor kinase 1 (BAK1) homologue 1, small grain 2",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0016021 - integral to membrane, GO:0009742 - brassinosteroid mediated signaling, GO:0032502 - developmental process, GO:0042127 - regulation of cell proliferation, GO:0009741 - response to brassinosteroid stimulus, GO:0004674 - protein serine/threonine kinase activity","TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000397 - grain size, TO:0002759 - grain number",null,"Os08g0174700","LOC_Os08g07760.1",{"$nulls":7},"_","OsSTA116","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ",null,"LOC_Os04g17120",{"$nulls":6},"_","MRG702, OsMRG702","_","MORF-RELATED GENE702, MORF-RELATED GENE 702",11," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0005634 - nucleus, GO:0009741 - response to brassinosteroid stimulus, GO:2000028 - regulation of photoperiodism, flowering, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0016573 - histone acetylation, GO:0016021 - integral to membrane, GO:0006325 - chromatin organization, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling","TO:0000145 - internode length, TO:0000040 - panicle length, TO:0002757 - flag leaf length, TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0002688 - leaf lamina joint bending, TO:0000590 - grain weight, TO:0000456 - spikelet number",null,"Os11g0545600","LOC_Os11g34300.1, LOC_Os11g34300.2, LOC_Os11g34300.3, LOC_Os11g34305.1",{"$nulls":6},"PR1B","OsPR1b, PR1b, OsPR1#011, OsPR1-11, PR-1b, OsPR-1b, PR1, PR-1, OsPR1a, PR1a","PATHOGENESIS-RELATED GENE 1B","pathogenesis-related gene 1b, PR1 basic, Pathogenesis-related protein class 1 basic gene, basic PR protein 1, Pathogenesis-related protein class 1, pathogenesis-related 1 protein",1," Tolerance and resistance - Disease resistance","GO:0009753 - response to jasmonic acid stimulus, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0006950 - response to stress, GO:0005576 - extracellular region, GO:0009723 - response to ethylene stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0050832 - defense response to fungus, GO:0051607 - defense response to virus, GO:0009609 - response to symbiotic bacterium","TO:0000173 - ethylene sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000020 - black streak dwarf virus resistance","PO:0009005 - root ","Os01g0382000","LOC_Os01g28450.1",null,"Os01g0350900","Os11g0168200",-1.1387272,0]
[{"$nulls":24},"Os08g0332700","Os10g0529700","Os10g0529700",-4.5457687,0,null,"Os07g0631900",3.1032016,"osa-miR393",-1.0916387,{"$nulls":29},"_","OsSTE1, OsDWF7","_","Sterol methyltransferase 1, Dwarf 7",1," Biochemical character,  Vegetative organ - Culm","GO:0005506 - iron ion binding, GO:0016126 - sterol biosynthetic process, GO:0016021 - integral to membrane, GO:0000248 - C-5 sterol desaturase activity, GO:0006633 - fatty acid biosynthetic process",null,null,"Os01g0134500","LOC_Os01g04260.1",{"$nulls":7},"_","OsSTA118","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0283600","LOC_Os04g21570.1",{"$nulls":6},"_","RAV6","_","RELATED TO ABSCISIC ACID INSENSITIVE3 (ABI3)/VIVIPAROUS1 (VP1) 6, RAV family gene 6",2," Vegetative organ - Leaf,  Seed - Morphological traits,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0009742 - brassinosteroid mediated signaling, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0010268 - brassinosteroid homeostasis, GO:0010422 - regulation of brassinosteroid biosynthetic process","TO:0000146 - seed length, TO:0000391 - seed size, TO:0000304 - seed thickness, TO:0000206 - leaf angle, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight",null,"Os02g0683500","LOC_Os02g45850.1",{"$nulls":6},"PR4","OsPR4, OsPR4a, PR4a, OsPR-4","PATHOGENESIS-RELATED GENE 4","pathogenesis-related gene 4, pathogenesis-related type 4, pathogenesis-related protein 4a, PR protein 4a",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009723 - response to ethylene stimulus, GO:0009615 - response to virus, GO:0006952 - defense response, GO:0009817 - defense response to fungus, incompatible interaction, GO:0080027 - response to herbivore, GO:0009651 - response to salt stress, GO:0009627 - systemic acquired resistance, GO:0006950 - response to stress",null,null,"Os11g0592200","LOC_Os11g37970.1",null,"Os07g0575700","Os03g0411800",-1.1460673,0]
[{"$nulls":24},"Os02g0648300","Os04g0581000","Os04g0581000",-4.6551485,0,null,"Os03g0635800",3.0973263,"Os06g0731800",-1.091273,{"$nulls":29},"TOGR1","DDX47, OsRH10","THERMOTOLERANT GROWTH REQUIRED1","ATP-dependent RNA helicase DDX47, RNA helicase 10, thermotolerant growth required1",3," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005730 - nucleolus, GO:0003723 - RNA binding, GO:0008026 - ATP-dependent helicase activity, GO:0005524 - ATP binding, GO:0006364 - rRNA processing, GO:0034337 - RNA folding, GO:0009408 - response to heat, GO:0007623 - circadian rhythm","TO:0000207 - plant height, TO:0000259 - heat tolerance",null,"Os03g0669000","LOC_Os03g46610.1, LOC_Os03g46610.2",{"$nulls":7},"_","OsSTA119","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0296034","LOC_Os04g22990.1",{"$nulls":6},"REL1","OsREL1","ROLLED AND ERECT LEAF 1","rolled and erect leaf 1, rolled and erect 1",1," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000396 - grain yield, TO:0000085 - leaf rolling, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000206 - leaf angle, TO:0002730 - grain shape","PO:0009013 - portion of meristem tissue ","Os01g0863500",{"$nulls":7},"PTF1","OsPTF1, OsbHLH096, bHLH96","PI STARVATION-INDUCED TRANSCRIPTION FACTOR-1","Pi starvation-induced transcription factor-1, bHLH transcription factor PTF1, basic helix-loop-helix protein 096",6," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009628 - response to abiotic stimulus, GO:0016036 - cellular response to phosphate starvation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0042594 - response to starvation, GO:0030528 - transcription regulator activity, GO:0045449 - regulation of transcription","TO:0000168 - abiotic stress trait",null,"Os06g0193400 ","LOC_Os06g09370.1, LOC_Os06g09370.2, LOC_Os06g09370.3",null,"Os05g0187800","Os02g0121300",-1.1479763,0]
[{"$nulls":24},"Os12g0609500","Os02g0194700","Os02g0194700",-4.7441564,0,null,"Os10g0522400",3.0943851,"Os03g0648400",-1.0908371,{"$nulls":29},"MRE11","OsMRE11, Mre11","MEIOTIC RECOMBINATION 11","Meiotic recombination 11",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis","GO:0000724 - double-strand break repair via homologous recombination, GO:0004527 - exonuclease activity, GO:0004519 - endonuclease activity, GO:0007126 - meiosis, GO:0005634 - nucleus, GO:0006302 - double-strand break repair, GO:0030145 - manganese ion binding, GO:0000278 - mitotic cell cycle, GO:0048232 - male gamete generation, GO:0007292 - female gamete generation, GO:0051301 - cell division, GO:0006260 - DNA replication, GO:0006281 - DNA repair, GO:0007049 - cell cycle, GO:0051320 - S phase, GO:0006303 - double-strand break repair via nonhomologous end joining","TO:0000420 - fertility related trait, TO:0000639 - seed fertility, TO:0000207 - plant height, TO:0000357 - growth and development trait","PO:0005052 - plant callus , PO:0009010 - seed , PO:0009047 - stem , PO:0009029 - stamen , PO:0009030 - carpel , PO:0020148 - shoot apical meristem , PO:0000025 - root tip , PO:0009005 - root , PO:0025034 - leaf ","Os04g0635900","LOC_Os04g54340.1",{"$nulls":7},"_","OsSTA120","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0337000","LOC_Os04g26834.1",{"$nulls":6},"REL2","OsREL2, OsDLT10, DLT10, RSD1, OsRSD1, RSD1/REL2","ROLLED AND ERECT LEAF 2","rolled and erect leaf 2, dwarf and low tillering 10, rice stomata developmental defect 1",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010374 - stomatal complex development, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0009965 - leaf morphogenesis, GO:0009733 - response to auxin stimulus","TO:0000276 - drought tolerance, TO:0000293 - chlorophyll-a content, TO:0000566 - stomatal frequency, TO:0000163 - auxin sensitivity, TO:0002681 - leaf curling, TO:0000329 - tillering ability, TO:0000447 - filled grain number, TO:0000661 - tiller bud dormancy, TO:0002730 - grain shape, TO:0000346 - tiller number, TO:0002672 - auxin content, TO:0002688 - leaf lamina joint bending, TO:0000206 - leaf angle, TO:0001018 - transpiration rate, TO:0000326 - leaf color, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000295 - chlorophyll-b content, TO:0001027 - net photosynthetic rate","PO:0004709 - axillary bud , PO:0009000 - pulvinus , PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0020141 - stem node ","Os10g0562700","LOC_Os10g41310.1",{"$nulls":6},"RAC5","Osrac5, OsRac5, RACD, OsRacD, OsRACD","RAC/ROP-TYPE GTPASE 5","small GTP-binding protein 5, Rac-like GTP-binding protein 5, GTPase protein RacD",2," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0019898 - extrinsic to membrane, GO:0005525 - GTP binding, GO:0007602 - phototransduction, GO:0009416 - response to light stimulus, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0007264 - small GTPase mediated signal transduction","TO:0000009 - genic male sterility-photoperiod sensitive, TO:0000074 - blast disease","PO:0009066 - anther ","Os02g0834000","LOC_Os02g58730.1, LOC_Os02g58730.2",null,"Os03g0390200","Os03g0130400",-1.1514372,0]
[{"$nulls":24},"Os01g0805500","Os09g0517900","Os09g0517900",-4.7632484,0,null,"Os05g0524800",3.0938232,"Os02g0644100",-1.0906506,{"$nulls":29},"TLD1","OsGH3-13, GH3-13, TLD1/OsGH3.13, TLD1, OsGH3.13, TLD2","INCREASED NUMBER OF TILLERS, ENLARGED LEAF ANGLES AND DWARFISM 1","increased number of tillers, enlarged leaf angles, and dwarfism 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009733 - response to auxin stimulus, GO:0009416 - response to light stimulus","TO:0006001 - salt tolerance, TO:0000152 - panicle number, TO:0000346 - tiller number",null,"Os11g0528700","LOC_Os11g32520.1, LOC_Os11g32510.1",{"$nulls":7},"PRD1","OsSTA121, STA121, OsPRD1","PUTATIVE RECOMBINATION INITIATION DEFECT 1",null,4," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007059 - chromosome segregation, GO:0051383 - kinetochore organization, GO:0043515 - kinetochore binding, GO:0042138 - meiotic DNA double-strand break formation, GO:0051321 - meiotic cell cycle, GO:0051225 - spindle assembly, GO:0005694 - chromosome, GO:0000776 - kinetochore, GO:0051382 - kinetochore assembly","TO:0000358 - female sterility, TO:0000437 - male sterility","PO:0009049 - inflorescence , PO:0009066 - anther ","Os04g0347800","LOC_Os04g28020.1",{"$nulls":6},"DEL1","OsPLL12, PLL12","DWARF AND EARLY-SENESCENCE LEAF 1","dwarf and early-senescence leaf1, Pectate lyase-like 12",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0022402 - cell cycle process, GO:0030570 - pectate lyase activity, GO:0046872 - metal ion binding, GO:0009658 - chloroplast organization, GO:0048573 - photoperiodism, flowering, GO:0048316 - seed development, GO:0010150 - leaf senescence, GO:0045490 - pectin catabolic process, GO:0043069 - negative regulation of programmed cell death, GO:0010394 - homogalacturonan metabolic process","TO:0000653 - seed development trait, TO:0000605 - hydrogen peroxide content, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0001015 - photosynthetic rate, TO:0000132 - basal internode diameter, TO:0000145 - internode length, TO:0001013 - lateral root number, TO:0000227 - root length, TO:0000249 - leaf senescence, TO:0006006 - monosaccharide content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000695 - leaf margin color, TO:0000495 - chlorophyll content, TO:0000137 - days to heading, TO:0000326 - leaf color","PO:0009047 - stem , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0000003 - whole plant , PO:0001170 - seed development stage ","Os10g0457200","LOC_Os10g31910.1",{"$nulls":6},"RAC6","OsRacB, RacB, OsRac6","RAC/ROP-TYPE GTPASE 6","Rac-like GTP-binding protein 6, GTPase protein RacB",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0019898 - extrinsic to membrane, GO:0007264 - small GTPase mediated signal transduction, GO:0005525 - GTP binding","TO:0000074 - blast disease","PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009037 - lemma , PO:0009038 - palea , PO:0009005 - root , PO:0009047 - stem , PO:0000256 - root hair cell ","Os02g0120800","LOC_Os02g02840.1",null,"Os07g0668900","Os01g0691600",-1.1520375,0]
[{"$nulls":24},"Os02g0253700","Os04g0339400","Os04g0339400",-4.896852,0,null,"Os05g0525000",3.0938232,"Os06g0156900",-1.0903841,{"$nulls":29},"_","OsBBX13, BBX13, OsRIP1, RIP1","_","B-box-containing protein 13, OsRE1-INTERACTING PROTEIN 1, RE1-INTERACTING PROTEIN 1",4," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0048573 - photoperiodism, flowering, GO:0008270 - zinc ion binding, GO:0007623 - circadian rhythm, GO:0005622 - intracellular","TO:0000040 - panicle length, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000207 - plant height","PO:0007616 - flowering stage , PO:0025034 - leaf , PO:0009006 - shoot system ","Os04g0540200","LOC_Os04g45690.1",{"$nulls":7},"_","OsSTA122","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0392300","LOC_Os04g32190.1",{"$nulls":6},"GS9",null,"GRAIN SHAPE GENE ON CHROMOSOME 9","Grain Shape Gene on Chromosome 9, Grain Shape 9",9," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances","GO:0007143 - female meiosis, GO:0051302 - regulation of cell division, GO:0005634 - nucleus, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0007140 - male meiosis","TO:0000266 - chalky endosperm, TO:0002730 - grain shape",null,"Os09g0448500","LOC_Os09g27590.1",{"$nulls":6},"SUT1","OsSUT1, OsSUT2","SUCROSE TRANSPORTER 1","Sucrose transporter-1, Sucrose transporter 1",3," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005364 - maltose:hydrogen symporter activity, GO:0051899 - membrane depolarization, GO:0002215 - defense response to nematode, GO:0008506 - sucrose:hydrogen symporter activity, GO:0009413 - response to flooding, GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0015770 - sucrose transport, GO:0008515 - sucrose transmembrane transporter activity, GO:0009846 - pollen germination, GO:0015293 - symporter activity, GO:0042950 - salicin transmembrane transporter activity, GO:0005985 - sucrose metabolic process, GO:0005887 - integral to plasma membrane, GO:0008519 - ammonium transmembrane transporter activity","TO:0002661 - seed maturation, TO:0000401 - plant growth hormone sensitivity, TO:0000286 - submergence sensitivity, TO:0000384 - nematode damage resistance, TO:0000333 - sugar content, TO:0000207 - plant height","PO:0000003 - whole plant ","Os03g0170900","LOC_Os03g07480.4, LOC_Os03g07480.3, LOC_Os03g07480.2, LOC_Os03g07480.1",null,"Os03g0183000","Os01g0847600",-1.1527194,0]
[{"$nulls":24},"Os03g0778100","Os10g0166600","Os10g0166600",-5.452,0,null,"Os01g0891300",3.0913131,"Os10g0567600",-1.0894774,{"$nulls":29},"BBX19","OsBBX19, OsM, DTH2, qDTH-2, OsCCT22, CCT22","B-BOX-CONTAINING PROTEIN 19","B-box-containing protein 19, Days to heading on chromosome 2, CCT domain-containing gene 22, CCT (CO, CO-LIKE and TOC1) domain protein 22, CCT domain protein 22",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010039 - response to iron ion, GO:0008270 - zinc ion binding, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0007623 - circadian rhythm, GO:0010045 - response to nickel ion, GO:0046686 - response to cadmium ion, GO:0048576 - positive regulation of short-day photoperiodism, flowering","TO:0006001 - salt tolerance, TO:0000224 - iron sensitivity, TO:0000303 - cold tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000207 - plant height, TO:0002616 - flowering time, TO:0000172 - jasmonic acid sensitivity, TO:0000137 - days to heading","PO:0009010 - seed , PO:0009006 - shoot system , PO:0025034 - leaf ","Os06g0298200","LOC_Os06g19444.2, LOC_Os06g19444.1",{"$nulls":7},"_","OsSTA123","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0392500","LOC_Os04g32210.1",{"$nulls":6},"BZR3","OsBZR3","BRASSINAZOLE RESISTANT 3","BRASSINAZOLE-RESISTANT3",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0040008 - regulation of growth, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000371 - yield trait",null,"Os06g0552300","LOC_Os06g35900.1",{"$nulls":6},"TATC","OsTATC, OsTatC, TatC","SEC-INDEPENDENT PROTEIN TRANSLOCASE SUBUNIT C","homologue of E. coli TATC, Sec-independent protein translocase subunit C",1," Tolerance and resistance - Stress tolerance","GO:0015450 - P-P-bond-hydrolysis-driven protein transmembrane transporter activity, GO:0016020 - membrane, GO:0009688 - abscisic acid biosynthetic process, GO:0009536 - plastid, GO:0009306 - protein secretion, GO:0008565 - protein transporter activity","TO:0000394 - drought related trait, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000495 - chlorophyll content, TO:0000478 - abscisic acid concentration","PO:0009006 - shoot system , PO:0009025 - vascular leaf ","Os01g0501700","LOC_Os01g31680.1, LOC_Os01g31680.2",null,"Os08g0129200","Os10g0405600",-1.1535813,0]
[{"$nulls":24},"Os02g0698000","Os06g0507300","Os06g0507300",-5.454693,0,null,"Os08g0375400",3.0913112,"Os06g0134000",-1.0890528,{"$nulls":29},"_","OsSERK2, OsBiSERK1, OsSERK1, OsSerk2, OsBAK1-2","_","somatic embryogenesis receptor-like kinase 2, somatic embryogenesis receptor kinase 2, bri1-associated receptor kinase 1 (BAK1) homologue 2",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009742 - brassinosteroid mediated signaling, GO:0001654 - eye development, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus","TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0002677 - brassinosteroid sensitivity",null,"Os04g0457800","LOC_Os04g38480.1, LOC_Os04g38480.2",{"$nulls":7},"_","OsSTA124","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0477500","LOC_Os04g40150.1, LOC_Os04g40150.2",{"$nulls":6},"IPMS1","OsIPMS1","ISOPROPYLMALATE SYNTHASE 1","isopropylmalate synthase 1",11," Biochemical character,  Seed - Physiological traits - Dormancy","GO:0009098 - leucine biosynthetic process, GO:0005983 - starch catabolic process, GO:0010029 - regulation of seed germination, GO:0006110 - regulation of glycolysis, GO:0043467 - regulation of generation of precursor metabolites and energy, GO:0003852 - 2-isopropylmalate synthase activity, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0008652 - cellular amino acid biosynthetic process, GO:0043201 - response to leucine, GO:0009507 - chloroplast, GO:0006099 - tricarboxylic acid cycle","TO:0000345 - seed viability, TO:0006002 - proline content, TO:0000340 - total soluble sugar content, TO:0002673 - amino acid content","PO:0007057 - 0 seed germination stage ","Os11g0142500","LOC_Os11g04670.1, LOC_Os11g04670.2",{"$nulls":6},"TUBA1","OsTubA1, TubA1, OS-TubA3, TubA3","TUBULIN ALPHA-1 CHAIN","Tubulin alpha-1 chain, Tubulin alpha-1",7," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0051258 - protein polymerization, GO:0005874 - microtubule, GO:0005525 - GTP binding, GO:0003924 - GTPase activity, GO:0007017 - microtubule-based process, GO:0005200 - structural constituent of cytoskeleton, GO:0046688 - response to copper ion, GO:0007018 - microtubule-based movement, GO:0009845 - seed germination, GO:0005737 - cytoplasm, GO:0005198 - structural molecule activity, GO:0009266 - response to temperature stimulus, GO:0016049 - cell growth","TO:0000432 - temperature response trait, TO:0000021 - copper sensitivity","PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os07g0574800","LOC_Os07g38730.1",null,"Os09g0522200","Os01g0926300",-1.158857,0]
[{"$nulls":24},"Os10g0531900","Os02g0569900","Os02g0569900",-5.477722,0,null,"Os05g0403000",3.0902357,"Os03g0825700",-1.0877773,{"$nulls":29},"NCED2","OsNCED2, OsNced2, OsCCD4b, CCD4b","9-CIS-EPOXYCAROTENOID DIOXYGENASE 2","9-cis-epoxycarotenoid dioxygenase 2, carotenoid-cleavage dioxygenase 4b",12," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0006979 - response to oxidative stress, GO:0009414 - response to water deprivation, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0010287 - plastoglobule, GO:0009725 - response to hormone stimulus, GO:0009409 - response to cold, GO:0045549 - 9-cis-epoxycarotenoid dioxygenase activity, GO:0046872 - metal ion binding, GO:0009688 - abscisic acid biosynthetic process","TO:0000401 - plant growth hormone sensitivity, TO:0000357 - growth and development trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000495 - chlorophyll content, TO:0000095 - osmotic response sensitivity, TO:0002657 - oxidative stress, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0002667 - abscisic acid content, TO:0000301 - xanthophyll content, TO:0000289 - carotene content, TO:0000496 - carotenoid content","PO:0009010 - seed ","Os12g0435200 ","LOC_Os12g24800.1",{"$nulls":7},"_","OsSTA126","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0489100","LOC_Os04g41200.1",{"$nulls":6},"_","SGL1","_","SG1-LIKE PROTEIN1, SG1-LIKE PROTEIN 1",2," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Reproductive organ - Panicle, Mode of branching","GO:0048316 - seed development, GO:0009742 - brassinosteroid mediated signaling, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus","TO:0000653 - seed development trait, TO:0000734 - grain length, TO:0002677 - brassinosteroid sensitivity, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000206 - leaf angle, TO:0000625 - spikelet density, TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000089 - panicle type, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage , PO:0007089 - stem elongation stage , PO:0001170 - seed development stage ","Os02g0762600","LOC_Os02g52490.1, LOC_Os02g52490.2",{"$nulls":6},"WRKY51","OsWRKY51","WRKY GENE 51","Rice WRKY gene51",4," Tolerance and resistance - Disease resistance","GO:0009751 - response to salicylic acid stimulus, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006999 - nuclear pore organization, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os04g0287400","LOC_Os04g21950.1",null,"Os02g0135200","Os04g0495800",-1.161551,0]
[{"$nulls":24},"Os01g0352100","Os05g0365500","Os05g0365500",-1.5318593,0,null,"Os01g0618900",3.0894601,"Os03g0359700",-1.0873381,{"$nulls":29},"_","OsDUR3, DUR3","_","high-affinity urea transporter OsDUR3",10," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0006995 - cellular response to nitrogen starvation, GO:0015204 - urea transmembrane transporter activity, GO:0015293 - symporter activity, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane","TO:0000011 - nitrogen sensitivity, TO:0000447 - filled grain number, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000576 - stem length, TO:0000371 - yield trait","PO:0000034 - vascular system , PO:0020139 - leaf midvein ","Os10g0580400","LOC_Os10g42960.1",{"$nulls":7},"_","OsSTA127, STA127","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0521600","LOC_Os04g44090.1",{"$nulls":6},"DXS2","OsDXS2, dxs2","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2","1-Deoxy-D-xylulose 5-phosphate synthase 2, Deoxyxylulose 5-phosphate synthase 2",6," Biochemical character,  Coloration - Chlorophyll,  Coloration - Others,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0008299 - isoprenoid biosynthetic process, GO:0016116 - carotenoid metabolic process, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity, GO:0016114 - terpenoid biosynthetic process, GO:0009416 - response to light stimulus","TO:0000495 - chlorophyll content, TO:0000496 - carotenoid content, TO:0000486 - seed color, TO:0002695 - beta-carotene content, TO:0002696 - alpha carotene content, TO:0000289 - carotene content, TO:0000075 - light sensitivity, TO:0002699 - lycopene content","PO:0025034 - leaf ","Os06g0142900","LOC_Os06g05100.5, LOC_Os06g05100.4, LOC_Os06g05100.1, LOC_Os06g05100.2, LOC_Os06g05100.3",{"$nulls":6},"WRKY71","OsWRKY71, WRKY-71","WRKY GENE 71","Rice WRKY gene71, Rice WRKY gene 71, Transcription factor WRKY71",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045449 - regulation of transcription, GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0009685 - gibberellin metabolic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0006952 - defense response","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance","PO:0005360 - aleurone layer , PO:0006339 - juvenile vascular leaf ","Os02g0181300","LOC_Os02g08440.4, LOC_Os02g08440.3, LOC_Os02g08440.2, LOC_Os02g08440.1",null,"Os03g0109500","Os07g0182100",-1.1619684,0]
[{"$nulls":24},"Os06g0679500","Os01g0611900","Os01g0611900",-1.1935519,0,null,"Os06g0627400",3.081855,"Os07g0682850",-1.086545,{"$nulls":29},"MIR167A","miR167a, osa-miR167aosa-miR167a-3p osa-miR167a-5p, OsmiR167a","MICRORNA167A","MICRORNA167a, osa-miRNA167a",12," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0035195 - gene silencing by miRNA, GO:0042742 - defense response to bacterium, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0009926 - auxin polar transport, GO:0009630 - gravitropism, GO:0006379 - mRNA cleavage","TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000429 - salt sensitivity, TO:0002693 - gravity response trait, TO:0000163 - auxin sensitivity, TO:0000567 - tiller angle",{"$nulls":10},"_","OsSTA128","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0545100","LOC_Os04g46079.1",{"$nulls":6},"SDH2-2","sdh2-2, OsSDH2-2","SUCCINATE DEHYDROGENASE SUBUNIT 2-2","mitochondrial Complex II subunit SDH2-2",9," Biochemical character,  Seed - Physiological traits - Dormancy","GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0005743 - mitochondrial inner membrane, GO:0006099 - tricarboxylic acid cycle, GO:0006121 - mitochondrial electron transport, succinate to ubiquinone, GO:0008177 - succinate dehydrogenase (ubiquinone) activity, GO:0009055 - electron carrier activity, GO:0045273 - respiratory chain complex II, GO:0045281 - succinate dehydrogenase complex, GO:0046872 - metal ion binding, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0051538 - 3 iron, 4 sulfur cluster binding, GO:0009845 - seed germination",null,"PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os09g0370300","LOC_Os09g20440.1",{"$nulls":6},"ZIP1","OsZIP1","ZINC TRANSPORTER 1","zinc transporter 1, Zrt-Irt-like protein 1, Zinc-regulated transporter 1",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0006829 - zinc ion transport, GO:0010043 - response to zinc ion, GO:0046688 - response to copper ion, GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum, GO:0046583 - cation efflux transmembrane transporter activity, GO:0005385 - zinc ion transmembrane transporter activity",null,"PO:0000036 - leaf vascular system , PO:0005020 - vascular bundle , PO:0009005 - root , PO:0009025 - vascular leaf ","Os01g0972200","LOC_Os01g74110.1",null,"Os07g0584100","Os10g0498700",-1.1622273,0]
[{"$nulls":24},"Os08g0347500","Os01g0793200","Os01g0793200",-1.4904846,0,null,"Os09g0423500",3.0806415,"Os04g0665800",-1.0864488,{"$nulls":29},"MIR168A","miR168a, osa-miR168a, osa-MIR168a osa-miR168a-3p osa-miR168a-5p, OsMIR168a","MICRORNA168A","MICRORNA168a, osa-miRNA168a",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0048573 - photoperiodism, flowering, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling","TO:0000202 - germination ratio, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0002768 - spikelet length, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability",{"$nulls":10},"_","OsSTA129","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0552400","LOC_Os04g46670.1",{"$nulls":6},"ST2","ALR, OsDCD, DCD","STRIPE 2 ","STRIPE2, albinic leaf and growth retardation, dCMP deaminase",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits","GO:0009658 - chloroplast organization, GO:0008284 - positive regulation of cell proliferation, GO:0045787 - positive regulation of cell cycle, GO:0006281 - DNA repair, GO:0004132 - dCMP deaminase activity, GO:0005739 - mitochondrion, GO:0016787 - hydrolase activity, GO:0010027 - thylakoid membrane organization, GO:0015995 - chlorophyll biosynthetic process, GO:0008270 - zinc ion binding, GO:0010020 - chloroplast fission","TO:0002715 - chloroplast development trait, TO:0000391 - seed size, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000145 - internode length, TO:0000137 - days to heading, TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0000069 - variegated leaf",null,"Os01g0765000","LOC_Os01g55974.1, LOC_Os01g55974.2, LOC_Os01g55974.3",{"$nulls":6},"ZIP2","OsZIP2, OsZIP11, ZIP11","ZINC TRANSPORTER 2","zinc transporter 2, Zrt-Irt-like protein 2, Zinc-regulated transporter 2, zinc transporter 11, Zrt-Irt-like protein 11",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046873 - metal ion transmembrane transporter activity, GO:0030001 - metal ion transport, GO:0005385 - zinc ion transmembrane transporter activity, GO:0005739 - mitochondrion, GO:0006829 - zinc ion transport, GO:0046686 - response to cadmium ion, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane",null,null,"Os03g0411800","LOC_Os03g29850.1",null,"Os05g0489900","Os09g0109800",-1.1632508,0]
[{"$nulls":24},"Os07g0485400","Os05g0534000","Os05g0534000",-1.5710148,0,null,"Os03g0638000",3.0793705,"Os02g0465400",-1.0864153,{"$nulls":29},"NH3","OsNPR3, OsNH3, NPR3, OsNPR3.1, OsNPR3.2, OsNPR3.3","NPR1 HOMOLOG 3","NPR1-like gene 3, NPR1 homolog 3, NPR1 paralog 3",3," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0009816 - defense response to bacterium, incompatible interaction, GO:0009817 - defense response to fungus, incompatible interaction, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus","TO:0000063 - mimic response, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height",null,"Os03g0667100","LOC_Os03g46440.3, LOC_Os03g46440.2, LOC_Os03g46440.1",{"$nulls":7},"_","OsSTA130","_",null,4," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os04g0558200","LOC_Os04g47110.1",{"$nulls":6},"GLUP7","Glup7","GLUTELIN PRECURSOR 7","glutelin precursor7, glutelin precursor 7, Glutelin precursor-7",null," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity","TO:0000490 - protein composition related trait","PO:0009010 - seed ",{"$nulls":8},"OVC","Ovc, Ovc(t)","OVICIDAL","Ovicidal effect to whitebacked planthopper",6," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000205 - white-backed planthopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os06g0223700","Os01g0135900",-1.1644572,0]
[{"$nulls":24},"Os03g0127700","Os06g0484600","Os06g0484600",-1.7895517,0,null,"Os05g0488600",3.074873,"Os08g0521400",-1.0846679,{"$nulls":29},"ABCB23","OsABCB23, OsISC32, OsATM3, ATM3","ABC TRANSPORTER B FAMILY MEMBER 23","ABC transporter superfamily ABCB subgroup member 23, Iron-sulfur cluster protein 32, ABC transporter of mitochondrion 3",6," Biochemical character,  Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0006281 - DNA repair, GO:0006749 - glutathione metabolic process, GO:0051301 - cell division, GO:0009941 - chloroplast envelope, GO:0005743 - mitochondrial inner membrane, GO:0009555 - pollen development, GO:0009658 - chloroplast organization, GO:0050790 - regulation of catalytic activity, GO:0048364 - root development, GO:0042626 - ATPase activity, coupled to transmembrane movement of substances, GO:0010288 - response to lead ion, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0055072 - iron ion homeostasis, GO:0040014 - regulation of multicellular organism growth, GO:0046686 - response to cadmium ion, GO:0048527 - lateral root development, GO:0006801 - superoxide metabolic process, GO:0010073 - meristem maintenance, GO:0010431 - seed maturation, GO:0016226 - iron-sulfur cluster assembly, GO:0045787 - positive regulation of cell cycle, GO:0005524 - ATP binding, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process, GO:0006879 - cellular iron ion homeostasis","TO:0006020 - shoot apical meristem development, TO:0000227 - root length, TO:0002661 - seed maturation, TO:0000656 - root development trait, TO:0001012 - lateral root length, TO:0000207 - plant height","PO:0007632 - seed maturation stage , PO:0007520 - root development stage , PO:0000016 - lateral root primordium , PO:0006085 - root meristem , PO:0020148 - shoot apical meristem ","Os06g0128300","LOC_Os06g03770.1",{"$nulls":7},"_","OsFbox619, Os_F0190, OsSTA265","_","F-box protein 619",11," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os11g0593600","LOC_Os11g38130.1",{"$nulls":6},"_","AO, OsAO, AAO, OsAAO, OsAO3, AO3","_","aldehyde oxidase, abscisic aldehyde oxidase, aldehyde oxidase 3",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005829 - cytosol, GO:0005506 - iron ion binding, GO:0004854 - xanthine dehydrogenase activity, GO:0004031 - aldehyde oxidase activity, GO:0010555 - response to mannitol stimulus, GO:0009414 - response to water deprivation, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, GO:0009851 - auxin biosynthetic process, GO:0050660 - FAD binding, GO:0009409 - response to cold, GO:0009725 - response to hormone stimulus, GO:0009688 - abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0010029 - regulation of seed germination, GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors, GO:0009115 - xanthine catabolic process, GO:0009055 - electron carrier activity","TO:0006001 - salt tolerance, TO:0000456 - spikelet number, TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000152 - panicle number","PO:0009010 - seed , PO:0009005 - root , PO:0025034 - leaf , PO:0009015 - portion of vascular tissue , PO:0000293 - guard cell , PO:0025395 - floral organ ","Os07g0281700","LOC_Os07g18120.1",{"$nulls":6},"PHYB","phyB, PHYB1, OsPHYB, OsphyB, OsYHB, YHB, OsPHYB/OsYHB","PHYTOCHROME B","PhytochromeB, Phytochrome B",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - Heading date,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0042744 - hydrogen peroxide catabolic process, GO:0009585 - red, far-red light phototransduction, GO:0007600 - sensory perception, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0007623 - circadian rhythm, GO:0018106 - peptidyl-histidine phosphorylation, GO:0016020 - membrane, GO:0008020 - G-protein coupled photoreceptor activity, GO:0009658 - chloroplast organization, GO:0030912 - response to deep water, GO:0009881 - photoreceptor activity, GO:0010114 - response to red light, GO:0009640 - photomorphogenesis, GO:0017006 - protein-tetrapyrrole linkage, GO:0010380 - regulation of chlorophyll biosynthetic process, GO:0000155 - two-component sensor activity, GO:0018298 - protein-chromophore linkage, GO:0048573 - photoperiodism, flowering, GO:0042803 - protein homodimerization activity","TO:0000524 - submergence tolerance, TO:0002685 - crown root number, TO:0000586 - seminal root length, TO:0000135 - leaf length, TO:0000158 - red light sensitivity, TO:0000326 - leaf color, TO:0000137 - days to heading, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000495 - chlorophyll content, TO:0002616 - flowering time, TO:0000298 - chlorophyll ratio, TO:0000566 - stomatal frequency, TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000346 - tiller number, TO:0002710 - root shape",null,"Os03g0309200","LOC_Os03g19590.1",null,"Os02g0559800","Os04g0542200",-1.1662532,0]
[{"$nulls":24},"Os04g0527000","Os10g0484900","Os10g0484900",-1.0735493,0,null,"Os02g0110600",3.0744903,"Os02g0115900",-1.0845118,{"$nulls":29},"WOX6","OsWOX6, Os WOX6, OsWOX12B, WOX12B","WUSCHEL-LIKE HOMEOBOX 6","WUSCHEL-related homeobox 6",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0009629 - response to gravity, GO:0009733 - response to auxin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0006351 - transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0009735 - response to cytokinin stimulus, GO:0005634 - nucleus, GO:0045165 - cell fate commitment, GO:0009790 - embryonic development, GO:0031099 - regeneration, GO:0009409 - response to cold, GO:0007275 - multicellular organismal development, GO:0043565 - sequence-specific DNA binding","TO:0000620 - embryo development trait, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000567 - tiller angle, TO:0000167 - cytokinin sensitivity, TO:0002693 - gravity response trait, TO:0000163 - auxin sensitivity, TO:0000303 - cold tolerance","PO:0008039 - stem base , PO:0001003 - formation of the leaf founder cells stage , PO:0000065 - phloem pole pericycle cell ","Os03g0325600","LOC_Os03g20910.1, LOC_Os03g20910.2",{"$nulls":7},"_","OsRH2, RH2, eIF4A-3","_","initiation factor eIF-4A, RNA helices 2, Eukaryotic initiation factor 4A-3",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0080050 - regulation of seed development, GO:0048573 - photoperiodism, flowering, GO:0035145 - exon-exon junction complex, GO:0005634 - nucleus, GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0008026 - ATP-dependent helicase activity, GO:0006397 - mRNA processing, GO:0006364 - rRNA processing, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0016020 - membrane, GO:0009555 - pollen development, GO:0005737 - cytoplasm, GO:0009790 - embryonic development, GO:0001666 - response to hypoxia, GO:0003723 - RNA binding, GO:0005524 - ATP binding, GO:0005730 - nucleolus, GO:0048653 - anther development, GO:0016607 - nuclear speck","TO:0000145 - internode length, TO:0000166 - gibberellic acid sensitivity, TO:0000653 - seed development trait, TO:0000180 - spikelet fertility, TO:0000620 - embryo development trait, TO:0000137 - days to heading, TO:0000207 - plant height","PO:0007631 - plant embryo stage , PO:0001170 - seed development stage , PO:0001007 - pollen development stage , PO:0025034 - leaf , PO:0020103 - flag leaf , PO:0001004 - anther development stage ","Os01g0639100","LOC_Os01g45190.1, LOC_Os01g45190.3",{"$nulls":6},"RBP-P","OsRBP-P","RNA-BINDING PROTEIN P","RNA binding protein P",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Other","GO:0016071 - mRNA metabolic process, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding, GO:0048573 - photoperiodism, flowering, GO:0016197 - endosome transport, GO:0006403 - RNA localization, GO:0005737 - cytoplasm, GO:0005768 - endosome, GO:0051028 - mRNA transport, GO:0009845 - seed germination, GO:0048316 - seed development, GO:0010431 - seed maturation, GO:0008380 - RNA splicing","TO:0002653 - endosperm storage protein content, TO:0000346 - tiller number, TO:0000180 - spikelet fertility, TO:0002616 - flowering time, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0002661 - seed maturation, TO:0000397 - grain size, TO:0000137 - days to heading, TO:0000485 - sterility related trait","PO:0007632 - seed maturation stage ","Os01g0265800","LOC_Os01g16090.1",{"$nulls":6},"PI2 -> see PIZ","Pi2(t)","PYRICULARIA ORYZAE RESISTANCE 2","Pyricularia oryzae resistance 2, Magnaporthe grisea resistance 2, Blast resistance 2",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os06g0680500","Os07g0222300",-1.176473,0]
[{"$nulls":24},"Os01g0894700","Os02g0119700","Os02g0119700",-3.5298154,0,null,"Os06g0695500",3.074114,"Os03g0358000",-1.0836544,{"$nulls":29},"DWT1","OsWOX7, Os WOX7, WOX7, OsWOX9A, DWT1/WOX9A, OsDWT1, WOX9A","DWARF TILLER 1","DWARF TILLER1, WUSCHEL-related homeobox 7, WUSCHEL-LIKE HOMEOBOX 7",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Other","GO:0005634 - nucleus, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0051301 - cell division, GO:0009826 - unidimensional cell growth, GO:0009690 - cytokinin metabolic process, GO:0009736 - cytokinin mediated signaling, GO:0010336 - gibberellic acid homeostasis, GO:0010476 - gibberellin-mediated signaling, GO:0009790 - embryonic development, GO:0007275 - multicellular organismal development, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity","TO:0000396 - grain yield, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000077 - shoot anatomy and morphology trait, TO:0000620 - embryo development trait, TO:0006036 - stem elongation, TO:0000621 - inflorescence development trait, TO:0000207 - plant height, TO:0001005 - basal tiller length","PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os01g0667400","LOC_Os01g47710.1",{"$nulls":7},"UBL40-2","UbL40-2, OsUbL40-2","UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-2","Ubiquitin fusion protein, ubiquitin fusion ribosomal protein L40-2",3," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003735 - structural constituent of ribosome, GO:0005840 - ribosome, GO:0006412 - translation, GO:0009408 - response to heat, GO:0048653 - anther development","TO:0000437 - male sterility, TO:0000259 - heat tolerance","PO:0001004 - anther development stage ","Os03g0259500","LOC_Os03g15370.2, LOC_Os03g15370.1",{"$nulls":6},"OTS1","OsOTS1","OVERLY TOLERANT TO SALT1","Overly Tolerant to Salt 1",6," Biochemical character,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0010030 - positive regulation of seed germination, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0048364 - root development, GO:0016929 - SUMO-specific protease activity, GO:0016926 - protein desumoylation, GO:0016049 - cell growth, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0006979 - response to oxidative stress, GO:0005634 - nucleus, GO:0004175 - endopeptidase activity","TO:0000227 - root length, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002686 - cell growth and development trait, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0002657 - oxidative stress, TO:0000495 - chlorophyll content, TO:0000430 - germination rate, TO:0006001 - salt tolerance, TO:0000656 - root development trait, TO:0002667 - abscisic acid content","PO:0006057 - cotyledon abaxial epidermis , PO:0007520 - root development stage ","Os06g0487900 ","LOC_Os06g29310.1, LOC_Os06g29310.2",{"$nulls":6},"PI36","Pi36(t), Pi36","PYRICULARIA ORYZAE RESISTANCE","Pyricularia oryzae resistance 36, Magnaporthe grisea resistance 36, Blast resistance 36",8," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus, GO:0043531 - ADP binding, GO:0006952 - defense response",null,null,"Os08g0150150",null,null,"Os05g0138300","Os08g0390000",-1.18,0]
[{"$nulls":24},"Os03g0861100","Os01g0785700","Os01g0785700",-1.705496,0,null,"Os10g0575900",3.073467,"Os07g0678600",-1.0833645,{"$nulls":29},"WOX11","OsWOX11, Os WOX11, OsWOX12A","WUSCHEL-LIKE HOMEOBOX 11","WUSCHEL-related homeobox 11",7," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0009629 - response to gravity, GO:0051302 - regulation of cell division, GO:0009926 - auxin polar transport, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0051365 - cellular response to potassium ion starvation, GO:0045454 - cell redox homeostasis, GO:0009734 - auxin mediated signaling pathway, GO:0009735 - response to cytokinin stimulus, GO:0009736 - cytokinin mediated signaling, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0043565 - sequence-specific DNA binding, GO:0009739 - response to gibberellin stimulus, GO:0031099 - regeneration, GO:0045165 - cell fate commitment","TO:0000163 - auxin sensitivity, TO:0000303 - cold tolerance, TO:0002685 - crown root number, TO:0000567 - tiller angle, TO:0000167 - cytokinin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance, TO:0000656 - root development trait, TO:0000166 - gibberellic acid sensitivity, TO:0002693 - gravity response trait, TO:0002692 - root meristem development, TO:0000346 - tiller number","PO:0001003 - formation of the leaf founder cells stage , PO:0006023 - bundle sheath , PO:0000065 - phloem pole pericycle cell , PO:0006085 - root meristem , PO:0000043 - crown root , PO:0007518 - crown root emergence stage , PO:0008039 - stem base , PO:0000025 - root tip ","Os07g0684900 ","LOC_Os07g48560.1",{"$nulls":7},"UBL40-1","UbL40-1, OsUbL40-1","UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-1","Ubiquitin 81-aa extension protein 1, ubiquitin fusion ribosomal protein L40-1",9," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006412 - translation, GO:0048653 - anther development, GO:0003735 - structural constituent of ribosome, GO:0009408 - response to heat, GO:0022625 - cytosolic large ribosomal subunit, GO:0005730 - nucleolus","TO:0000437 - male sterility, TO:0000259 - heat tolerance","PO:0001004 - anther development stage ","Os09g0452700 ","LOC_Os09g27930.1",{"$nulls":6},"FUG1","OsFUG1","_","SUMO protease protein",3," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits","GO:0009739 - response to gibberellin stimulus, GO:0016929 - SUMO-specific protease activity, GO:0016926 - protein desumoylation, GO:0004175 - endopeptidase activity, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000181 - seed weight, TO:0000420 - fertility related trait, TO:0000207 - plant height",null,"Os03g0344300 ","LOC_Os03g22400.3, LOC_Os03g22400.2, LOC_Os03g22400.1",{"$nulls":6},"PI37","Pi37(t), Pi37","PYRICULARIA ORYZAE RESISTANCE 37","Pyricularia oryzae resistance 37, Magnaporthe grisea resistance 37, Blast resistance 37",1," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0009620 - response to fungus, GO:0043531 - ADP binding",null,null,"Os01g0781700","LOC_Os01g57310.1, LOC_Os01g57310.2",null,"Os05g0207300","Os07g0188800",-1.1814417,0]
[{"$nulls":24},"Os04g0550500","Os04g0675600","Os04g0675600",-1.9244651,0,null,"Os01g0866000",3.0730705,"Os08g0451400",-1.0829905,{"$nulls":29},"CYCU2;1","CycU2;1, CycU2;os;1, Orysa;CycU2;1, OsCYCP3;1, CYC U2","CYCLIN-U2-1","U-type cyclin 2;1, P-type cyclin 3;1, U-type cyclin 2",4," Biochemical character,  Vegetative organ - Culm","GO:0009742 - brassinosteroid mediated signaling, GO:0051301 - cell division, GO:0007049 - cell cycle, GO:0000079 - regulation of cyclin-dependent protein kinase activity","TO:0000544 - mesocotyl length, TO:0002677 - brassinosteroid sensitivity",null,"Os04g0552300","LOC_Os04g46660.1",{"$nulls":7},"UBL40-4","UbL40-4, OsUbL40-4","UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-4","Ubiquitin/ribosomal protein S27a, ubiquitin fusion ribosomal protein L40-4",9," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009408 - response to heat, GO:0048653 - anther development, GO:0003735 - structural constituent of ribosome, GO:0006412 - translation, GO:0005840 - ribosome","TO:0000259 - heat tolerance, TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os09g0483400","LOC_Os09g31031.3, LOC_Os09g31031.2, LOC_Os09g31031.1",{"$nulls":6},"SRL2","NRL2, OsSRL2, OsNRL2","SEMI-ROLLED LEAF 2","semi-rolled leaf2, semi-rolled leaf 2, narrow and rolled leaf 2",3," Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits - Grain shape","GO:0009834 - secondary cell wall biogenesis, GO:0009556 - microsporogenesis, GO:0009555 - pollen development, GO:0048366 - leaf development, GO:0006558 - L-phenylalanine metabolic process","TO:0000207 - plant height, TO:0000492 - leaf shape, TO:0002641 - acid detergent fiber, TO:0000455 - seed set percent, TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000149 - seed width, TO:0000391 - seed size, TO:0000430 - germination rate, TO:0000085 - leaf rolling","PO:0009066 - anther , PO:0005020 - vascular bundle , PO:0001050 - leaf development stage , PO:0006019 - leaf abaxial epidermis , PO:0025034 - leaf , PO:0009071 - anther wall tapetum , PO:0001007 - pollen development stage , PO:0001032 - E anther wall tapetum degeneration initiated stage , PO:0009005 - root , PO:0020104 - leaf sheath ","Os03g0308200","LOC_Os03g19520.3, LOC_Os03g19520.2, LOC_Os03g19520.1",{"$nulls":6},"PICO39","PiCO39(t), Pi-CO39, Pi-CO39(t), pi-CO39(t)","PYRICULARIA ORYZAE RESISTANCE CO39","Pyricularia oryzae resistance CO39(Indica), Magnaporthe grisea resistance CO39, Blast resistance CO39",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os02g0120600","Os05g0594800",-1.1863712,0]
[{"$nulls":24},"Os03g0175600","Os10g0493100","Os10g0493100",1.7131524,0,null,"Os03g0259600",3.07153,"Os07g0452700",-1.0829378,{"$nulls":29},"GPA8","v-ATP-E, Osv-ATP-E, OsVHA-E1, VHA-E1, OsGPA8","GLUTELIN PRECURSOR ACCUMULATION 8","vacuolar ATP synthase subunit E, vacuolar H+-ATPase subunit E isoform 1, glutelin precursor accumulation8",1," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Storage substances,  Character as QTL - Plant growth activity","GO:0031982 - vesicle, GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain, GO:0007030 - Golgi organization, GO:0009705 - plant-type vacuole membrane, GO:0006885 - regulation of pH, GO:0005802 - trans-Golgi network, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0006892 - post-Golgi vesicle-mediated transport, GO:0009960 - endosperm development, GO:0015031 - protein transport, GO:0033363 - secretory granule organization, GO:0051453 - regulation of intracellular pH, GO:0032527 - protein exit from endoplasmic reticulum, GO:0046961 - proton-transporting ATPase activity, rotational mechanism","TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000063 - mimic response, TO:0000346 - tiller number, TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content, TO:0000592 - 1000-dehulled grain weight","PO:0009089 - endosperm , PO:0009051 - spikelet , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009005 - root , PO:0007633 - endosperm development stage ","Os01g0659200","LOC_Os01g46980.1",{"$nulls":7},"PUB13","OsPUB13, OsSTA182","PLANT U-BOX-CONTAINING PROTEIN 13","plant U-box-containing protein 13, U-box protein 13",6," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004842 - ubiquitin-protein ligase activity, GO:0000151 - ubiquitin ligase complex",null,"PO:0009066 - anther ","Os06g0726900","LOC_Os06g51130.1",{"$nulls":6},"_","OsMED11_1, MED11_1","_","Mediator 11_1",2," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016592 - mediator complex","TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000734 - grain length",null,"Os02g0189100 ","LOC_Os02g09600.1, LOC_Os02g09600.2, LOC_Os02g09600.3",{"$nulls":6},"PID1","Pi-d1, Pi-d(t), Pi-d(t)1, PiD1(t), Pid1, Pid1(t)","PYRICULARIA ORYZAE RESISTANCE D1","Pyricularia oryzae resistance d1, Magnaporthe grisea resistance d1, Blast resistance d1",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os03g0762200","Os09g0509100",-1.1872185,0]
[{"$nulls":24},"Os06g0264200","Os09g0417500","Os09g0417500",1.5881943,0,null,"Os06g0109801",3.0671647,"Os08g0101800",-1.082066,{"$nulls":29},"GPX1","OsGpx1, GPX1, OsGPx01, OsGPX1","GLUTATHIONE PEROXIDASE 1","glutathione peroxidase 1",4," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0004602 - glutathione peroxidase activity, GO:0005739 - mitochondrion, GO:0010332 - response to gamma radiation, GO:0045454 - cell redox homeostasis, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0010109 - regulation of photosynthesis, GO:0048364 - root development","TO:0000445 - seed number, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000656 - root development trait, TO:0000429 - salt sensitivity, TO:0000456 - spikelet number","PO:0007520 - root development stage ","Os04g0556300","LOC_Os04g46960.4, LOC_Os04g46960.3, LOC_Os04g46960.2, LOC_Os04g46960.1",{"$nulls":7},"MC3","OsMC3, OsSTA102","METACASPASE 3","Metacaspase 3",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0004197 - cysteine-type endopeptidase activity, GO:0050832 - defense response to fungus","TO:0000303 - cold tolerance, TO:0000255 - sheath blight disease resistance, TO:0000074 - blast disease, TO:0000259 - heat tolerance","PO:0009066 - anther ","Os03g0389000","LOC_Os03g27170.1",{"$nulls":6},"_","OsMED5_3, MED5_3","_","Mediator 5_3",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000402 - grain width, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield",null,"Os07g0681500","LOC_Os07g48350.1",{"$nulls":6},"PID2","Pi-d2, Pi-d(t)2, PiD2(t), Pid2, PI-D2, Pi-d2(t)","PYRICULARIA ORYZAE RESISTANCE D2","Pyricularia oryzae resistance d2, Magnaporthe grisea resistance d2, Blast resistance d2, PI-D2 protein kinase",6," Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0009620 - response to fungus, GO:0005524 - ATP binding",null,null,"Os06g0494100","LOC_Os06g29810.1, LOC_Os06g29810.2, LOC_Os06g29810.3",null,"Os09g0501600","Os09g0567400",-1.188919,0]
[{"$nulls":24},"Os09g0304500","Os01g0170800","Os01g0170800",-1.2355596,0,null,"Os04g0390800",3.0635817,"Os03g0124800",-1.0817055,{"$nulls":29},"EXPA8","OsEXPA8, OsEXP8, osaEXPa1.17","ALPHA-EXPANSIN 8","Expansin-A8, Alpha-expansin-8",1," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0005576 - extracellular region, GO:0005618 - cell wall, GO:0009664 - plant-type cell wall organization, GO:0016020 - membrane, GO:0009651 - response to salt stress, GO:0048364 - root development, GO:0048767 - root hair elongation","TO:0000207 - plant height, TO:0001013 - lateral root number, TO:0002665 - root hair length, TO:0000227 - root length, TO:0000656 - root development trait, TO:0006001 - salt tolerance","PO:0009005 - root , PO:0009006 - shoot system , PO:0007520 - root development stage ","Os01g0248900","LOC_Os01g14650.1",{"$nulls":7},"_","OsSTA240, OsMATE39, MATE39","_","MATE efflux protein, multidrug and toxic compound extrusion 39",10," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0015297 - antiporter activity, GO:0015238 - drug transporter activity, GO:0005773 - vacuole, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane",null,"PO:0009066 - anther ","Os10g0195000","LOC_Os10g11860.1",{"$nulls":6},"MED14_1 ","OsMED14_1","MEDIATOR 14_1 ","Mediator 14_1, Mediator subunit 14_1",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0001944 - vasculature development, GO:0048653 - anther development, GO:0070847 - core mediator complex, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048366 - leaf development, GO:0009556 - microsporogenesis, GO:0051301 - cell division, GO:0010252 - auxin homeostasis, GO:0016592 - mediator complex","TO:0000146 - seed length, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000655 - leaf development trait, TO:0000621 - inflorescence development trait, TO:0000382 - 1000-seed weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000370 - leaf width, TO:0001035 - stem width, TO:0000470 - vascular tissue related trait, TO:0000539 - large vascular bundle number, TO:0000558 - small vascular bundle number, TO:0000257 - root branching, TO:0001013 - lateral root number, TO:0000050 - inflorescence branching, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000391 - seed size, TO:0002672 - auxin content, TO:0000145 - internode length, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000557 - secondary branch number, TO:0000456 - spikelet number, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000079 - lemma and palea anatomy and morphology trait","PO:0009066 - anther , PO:0025034 - leaf , PO:0009005 - root , PO:0009071 - anther wall tapetum , PO:0001004 - anther development stage , PO:0009051 - spikelet , PO:0020048 - microspore , PO:0005029 - root primordium , PO:0001083 - inflorescence development stage , PO:0001050 - leaf development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os08g0332800 ","LOC_Os08g24400.1",{"$nulls":6},"PIKH","Pi-kh, Pi k-h, Pi54, Pi54rh, Pi-k(h), Pik-h, Pikh","PYRICULARIA ORYZAE RESISTANCE KH","Pyricularia oryzae resistance, Magnaporthe grisea resistance kh, Blast resistance kh",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",null,null,"Os11g0639100","LOC_Os11g42010.1",null,"Os03g0678800","Os07g0187300",-1.1921543,0]
[{"$nulls":24},"Os03g0786100","Os07g0603900","Os07g0603900",-1.9095573,0,null,"Os03g0236675",3.0616848,"Os02g0653850",-1.0814687,{"$nulls":29},"PTD1","OsLTP1.2, OsLtpI.2, OsPTD1, Psd1","PHOTOPERIOD-THERMO-SENSITIVE DWARFISM 1","non-specific lipid transfer protein 1.2, lipid transfer protein 1.2, type 1 non-specific lipid transfer protein 2, Photoperiod-thermo-sensitive dwarfism 1, Photoperiod-sensitive dwarf 1",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0008289 - lipid binding, GO:0009611 - response to wounding, GO:0048571 - long-day photoperiodism, GO:0006869 - lipid transport","TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000229 - photoperiod sensitivity","PO:0009009 - plant embryo ","Os01g0822900","LOC_Os01g60740.1",{"$nulls":7},"_","OsOFP31, OsOFP26, OsSTA245","_","OVATE family protein 31, ovate family protein 26, OVATE-domain containing protein 26",10," Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus",null,"PO:0005052 - plant callus , PO:0009066 - anther ","Os10g0431700","LOC_Os10g29610.1",{"$nulls":6},"_","OsMED20_1, MED20_1","_","Mediator 20_1",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016592 - mediator complex, GO:0003713 - transcription coactivator activity, GO:0006357 - regulation of transcription from RNA polymerase II promoter","TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000402 - grain width, TO:0000734 - grain length",null,"Os09g0443500 ","LOC_Os09g27140.1, LOC_Os09g27140.2",{"$nulls":6},"PIY1","Pi-y1(t), Pi-y(t), Piy1(t)","PYRICULARIA GRISEA RESISTANCE Y 1","Pyricularia oryzae resistance y1, Magnaporthe grisea resistance y1, Blast resistance y1",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os01g0907400","Os03g0302000",-1.1927795,0]
[{"$nulls":24},"Os12g0420400","Os01g0546500","Os01g0546500",-1.6057011,0,null,"Os06g0138900",3.0603445,"Os01g0102700",-1.0813541,{"$nulls":29},"GRX6","OsGRX6, OsGrx_I1, Grx_I1","GLUTAREDOXIN 6","glutaredoxin 6",1," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0045487 - gibberellin catabolic process, GO:0048878 - chemical homeostasis, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009055 - electron carrier activity, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0009686 - gibberellin biosynthetic process, GO:0009691 - cytokinin biosynthetic process, GO:0010476 - gibberellin-mediated signaling, GO:0015035 - protein disulfide oxidoreductase activity, GO:0015996 - chlorophyll catabolic process, GO:0045454 - cell redox homeostasis, GO:0046872 - metal ion binding, GO:0009736 - cytokinin mediated signaling, GO:0009826 - unidimensional cell growth","TO:0000445 - seed number, TO:0000402 - grain width, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000432 - temperature response trait, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002660 - cytokinin content, TO:0002675 - gibberellic acid content",null,"Os01g0667900","LOC_Os01g47760.1",{"$nulls":7},"_","OsMAGO1, MAGO1","_","MAGO NASHI 1",8," Reproductive organ - Spikelet, flower, glume, awn","GO:0009908 - flower development, GO:0008380 - RNA splicing, GO:0035145 - exon-exon junction complex","TO:0000622 - flower development trait, TO:0000215 - stamen anatomy and morphology trait",null,"Os08g0107900","LOC_Os08g01660.1, LOC_Os08g01660.2, LOC_Os08g01660.3",{"$nulls":6},"_","OsMED12_2, MED12_2","_","Mediator 12_2",9," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0003713 - transcription coactivator activity, GO:0048316 - seed development, GO:0016592 - mediator complex","TO:0000653 - seed development trait, TO:0000382 - 1000-seed weight, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0001170 - seed development stage ","Os10g0550100/Os10g0550066","LOC_Os10g40260.1",{"$nulls":6},"PR1","OsPR1","PATHOGEN RESPONSE GENE 1","Pathogen response genes",null," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0006950 - response to stress",{"$nulls":5},"Os03g0815100","Os02g0760300",-1.1943113,0]
[{"$nulls":24},"Os09g0450600","Os10g0495200","Os10g0495200",-1.4853836,0,null,"Os01g0659900",3.0577822,"Os01g0337500",-1.0808805,{"$nulls":29},"PP2C9","OsPP15, PP15, OsPP2C09, OsPP2C9","PROTEIN PHOSPHATASE 2C 9","protein phosphatase 15, protein phosphatase 2C09, protein phosphatase 2C9, protein phosphatase 2C 9",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0006470 - protein amino acid dephosphorylation, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0009737 - response to abscisic acid stimulus, GO:0080134 - regulation of response to stress, GO:0046872 - metal ion binding, GO:0016021 - integral to membrane, GO:0010119 - regulation of stomatal movement, GO:0030307 - positive regulation of cell growth, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0048831 - regulation of shoot development, GO:0010030 - positive regulation of seed germination, GO:0010374 - stomatal complex development, GO:0050891 - multicellular organismal water homeostasis, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0004722 - protein serine/threonine phosphatase activity","TO:0000430 - germination rate, TO:0000566 - stomatal frequency, TO:0000207 - plant height, TO:0006036 - stem elongation, TO:0000656 - root development trait, TO:0000278 - root to shoot ratio, TO:0000227 - root length, TO:0000447 - filled grain number, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0007057 - 0 seed germination stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007089 - stem elongation stage , PO:0007520 - root development stage ","Os01g0846300","LOC_Os01g62760.1",{"$nulls":7},"_","OsY14a, Y14a","_",null,5," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003676 - nucleic acid binding, GO:0009555 - pollen development, GO:0000166 - nucleotide binding","TO:0000576 - stem length, TO:0000207 - plant height, TO:0000079 - lemma and palea anatomy and morphology trait",null,"Os05g0140500","LOC_Os05g04850.1, LOC_Os05g04850.2",{"$nulls":6},"_","OsMED4_2, MED4_2","_","Mediator 4_2",11," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000396 - grain yield, TO:0000402 - grain width, TO:0000734 - grain length, TO:0000382 - 1000-seed weight","PO:0009010 - seed , PO:0001170 - seed development stage ",null,"LOC_Os11g05150",{"$nulls":6},"PSR1","PSR1, NiR, OsNiR, OsNIR1, NIR1, FD-NiR, OsNiR2","PROMOTOR OF SHOOT REGENERATION 1","Promotor of shoot regeneration-1, ferredoxin-nitrite reductase, \\Ferredoxin--nitrite reductase, chloroplastic\\\"\"",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0042128 - nitrate assimilation, GO:0020037 - heme binding, GO:0006810 - transport, GO:0022900 - electron transport chain, GO:0019740 - nitrogen utilization, GO:0046872 - metal ion binding, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0048307 - ferredoxin-nitrite reductase activity","TO:0000371 - yield trait, TO:0000557 - secondary branch number, TO:0006032 - panicle size, TO:0000547 - primary branch number, TO:0000346 - tiller number",null,"Os01g0357100","LOC_Os01g25484.3, LOC_Os01g25484.2, LOC_Os01g25484.1",null,"Os08g0544900","Os03g0190000",-1.1982632,0]
[{"$nulls":24},"Os03g0135100","Os01g0648500","Os01g0648500",-0.96216375,0,null,"Os01g0730000",3.0563896,"Os02g0566800",-1.0808505,{"$nulls":29},"HT","OsHT, OsLHT1, LHT1","HISTIDINE TRANSPORTER","Histidine Transporter, lysine and histidine transporter 1, lysine-histidine-like transporter 1, Lysine/Histidine transporter 1, Lysine-Histidine-type Transporter 1",8," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0016021 - integral to membrane, GO:0009536 - plastid, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0042886 - amide transport, GO:0015800 - acidic amino acid transport, GO:0010233 - phloem transport, GO:0048367 - shoot development, GO:0006865 - amino acid transport, GO:0005886 - plasma membrane, GO:0019740 - nitrogen utilization, GO:0043090 - amino acid import","TO:0000409 - peak viscosity, TO:0000207 - plant height, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000371 - yield trait, TO:0000576 - stem length, TO:0000346 - tiller number, TO:0000654 - shoot development trait, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0002673 - amino acid content, TO:0000598 - protein content, TO:0000455 - seed set percent, TO:0000138 - brown rice protein, TO:0000430 - germination rate, TO:0000653 - seed development trait, TO:0000196 - amylose content, TO:0000379 - cool paste viscosity, TO:0000621 - inflorescence development trait","PO:0006036 - root epidermis , PO:0025413 - primary leaf vein , PO:0020138 - leaf lamina vein , PO:0025261 - pericycle cell , PO:0005059 - root endodermis , PO:0005427 - sclerenchyma , PO:0005772 - exodermis , PO:0000048 - leaf lamina vascular system , PO:0020124 - root stele , PO:0000258 - root cortex , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0020104 - leaf sheath , PO:0025395 - floral organ , PO:0025066 - stalk , PO:0005020 - vascular bundle , PO:0009005 - root , PO:0009047 - stem , PO:0020103 - flag leaf , PO:0025034 - leaf ","Os08g0127100","LOC_Os08g03350.1",{"$nulls":7},"_","Osppc-b, OsSTA1, ppc-b, STA1, BTPC, OsBTPC","_","phosphoenolpyruvate carboxylase b, PEPCase b, bacterial-type PEPC, bacterial-type Phosphoenolpyruvate carboxylase",1," Biochemical character,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006099 - tricarboxylic acid cycle, GO:0005737 - cytoplasm, GO:0008964 - phosphoenolpyruvate carboxylase activity, GO:0015977 - carbon utilization by fixation of carbon dioxide",null,"PO:0009066 - anther , PO:0025281 - pollen ","Os01g0110700","LOC_Os01g02050.1",{"$nulls":6},"SFR6","OsMed16_1, Med16_1, OsSFR6, OsMED16, MED16","SENSITIVE TO FREEZING-6","Mediator 16_1, Mediator complex subunit 16, Mediator subunit 16",10," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0070265 - necrotic cell death, GO:0010942 - positive regulation of cell death, GO:0045926 - negative regulation of growth, GO:0010150 - leaf senescence, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006970 - response to osmotic stress, GO:0050826 - response to freezing, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0010310 - regulation of hydrogen peroxide metabolic process","TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000173 - ethylene sensitivity, TO:0000495 - chlorophyll content, TO:0000357 - growth and development trait, TO:0000371 - yield trait, TO:0000249 - leaf senescence, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000149 - seed width, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance","PO:0009047 - stem , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0020105 - ligule , PO:0025034 - leaf , PO:0009005 - root ","Os10g0498700","LOC_Os10g35560.2, LOC_Os10g35560.1",{"$nulls":6},"qOVA4","qOVA4, qOVA5-2, qOVA6 (?)","OVICIDAL RESPONSE TO THE WBPH BY WATERY LESION ","ovicidal response to the WBPH by watery lesion （液浸化）",null," Tolerance and resistance - Insect resistance,  unclassified","GO:0009625 - response to insect",{"$nulls":5},"Os03g0751100","Os01g0149800",-1.1984701,0]
[{"$nulls":24},"Os01g0649900","Os07g0563300","Os07g0563300",1.3104769,0,null,"Os05g0132100",3.055768,"Os06g0102700",-1.0805988,{"$nulls":29},"_","OsGBP3, GBP3","_","barley B recombinant like protein B, GAGA-binding transcription factor 3",10," Vegetative organ - Culm,  Seed - Morphological traits,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000734 - grain length, TO:0000207 - plant height",null,"Os10g0115200","LOC_Os10g02584.1, LOC_Os10g02584.2, LOC_Os10g02584.3",{"$nulls":7},"_","OsFbox443, Os_F0084, OsSTA212","_","F-box protein 443",8," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os08g0382800","LOC_Os08g29400.1, LOC_Os08g29400.2",{"$nulls":6},"_","OsMed34_2, Med34_2","_","Mediator 34_2",11," Seed - Morphological traits - Grain shape","GO:0043140 - ATP-dependent 3'-5' DNA helicase activity, GO:0000724 - double-strand break repair via homologous recombination, GO:0003677 - DNA binding, GO:0005524 - ATP binding, GO:0032508 - DNA duplex unwinding, GO:0005634 - nucleus, GO:0005694 - chromosome, GO:0005737 - cytoplasm, GO:0006310 - DNA recombination, GO:0009378 - four-way junction helicase activity, GO:0016021 - integral to membrane",null,null,"Os11g0708600 ","LOC_Os11g48090.2, LOC_Os11g48090.3, LOC_Os11g48090.4, LOC_Os11g48090.5",{"$nulls":6},"qRCT3","qRCT3","COLD TOLERANCE","cold tolerance",null," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os07g0109500","Os02g0805200",-1.201994,0]
[{"$nulls":24},"Os09g0560000","Os07g0563350","Os07g0563350",2.4322824,0,null,"Os02g0533300",3.0543835,"Os09g0527500",-1.0800165,{"$nulls":29},"_","OsGBP1, GBP1","_","barley B recombinant like protein D, GAGA-binding transcription factor 1",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits,  Other","GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048573 - photoperiodism, flowering, GO:0003677 - DNA binding","TO:0000207 - plant height, TO:0000734 - grain length, TO:0002616 - flowering time, TO:0000137 - days to heading",null,"Os06g0130600","LOC_Os06g04010.1, LOC_Os06g04010.2",{"$nulls":7},"_","OsFbox509, Os_F0258, OsADF, ADF","_","F-box protein 509, anther development F-box",10," Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048657 - tapetal cell differentiation, GO:0048653 - anther development, GO:0009555 - pollen development","TO:0000421 - pollen fertility, TO:0000214 - anther shape, TO:0000531 - anther length, TO:0000187 - anther color",null,"Os10g0125300","LOC_Os10g03660.1",{"$nulls":6},"CYP704A3","OsCYP704A3","P-450 704A3","Cytochrome P450 704A3",4," Biochemical character,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape","GO:0005506 - iron ion binding, GO:0004497 - monooxygenase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0020037 - heme binding, GO:0010229 - inflorescence development","TO:0000146 - seed length, TO:0000621 - inflorescence development trait, TO:0000391 - seed size, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os04g0573900","LOC_Os04g48460.1, LOC_Os04g48460.2",{"$nulls":6},"qRCT6a","qRCT6a","COLD TOLERANCE","cold tolerance",null," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os12g0632700","Os01g0209200",-1.202292,0]
[{"$nulls":24},"Os08g0509400","Os07g0679700","Os07g0679700",1.1529595,0,null,"Os12g0482700",3.0479543,"Os04g0685100",-1.0797013,{"$nulls":29},"WOX9C","OsWOX9C, DWL2, OsDWL2, DWL2/WOX9C","WUSCHEL-LIKE HOMEOBOX 9C","WUSCHEL-related homeobox 9C, DWT-LIKE 2",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0007275 - multicellular organismal development, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000346 - tiller number, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000145 - internode length","PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os05g0564500","LOC_Os05g48990.1",{"$nulls":7},"_","OsFbox542, Os_F0480, OsSTA237","_","F-box protein 542",10," Reproductive organ - Spikelet, flower, glume, awn",null,null,"PO:0009066 - anther ","Os10g0183800","LOC_Os10g10420.1",{"$nulls":6},"MIR2923A","osa-MIR2923a, MIR2923a","MICRORNA 2923A","MICRORNA 2923a",4," Seed - Morphological traits - Grain shape,  Other","GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0002731 - grain length to width ratio, TO:0000734 - grain length",{"$nulls":9},"qRCT6b","qRCT6b","COLD TOLERANCE","cold tolerance",null," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os04g0450100","Os08g0500700",-1.2030383,0]
[{"$nulls":24},"Os06g0148200","Os03g0120900","Os03g0120900",-1.0991997,0,null,"Os01g0104900",3.0472882,"Os05g0220900",-1.0796576,{"$nulls":29},"BZIP1","OsbZIP01, OsbZIP1, OsRE1, RE1","b-ZIP TRANSCRIPTION FACTOR 1","b-ZIP transcription factor 01, regulator of Ehd1",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Character as QTL - Yield and productivity,  Other","GO:0043565 - sequence-specific DNA binding, GO:0048573 - photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0003700 - transcription factor activity","TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0025034 - leaf ","Os01g0174000","LOC_Os01g07880.1",{"$nulls":7},"ERF101","OsERF#101, OsERF101, OsDERF6, DERF6, AP2/EREBP#089, AP2/EREBP89, OsRap2.6, Rap2.6, ERF113, OsERF113","ETHYLENE RESPONSE FACTOR 101","ETHYLENE-RESPONSIVE ELEMENT-BINDING FACTOR 101, drought-responsive ethylene response factor 6, drought-responsive ERF 6, ethylene response factor 101, APETALA2/ethylene-responsive element binding protein 89",4," Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0048653 - anther development, GO:0010150 - leaf senescence, GO:0010229 - inflorescence development, GO:0009753 - response to jasmonic acid stimulus, GO:0009646 - response to absence of light, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm","TO:0006001 - salt tolerance, TO:0000180 - spikelet fertility, TO:0000152 - panicle number, TO:0000449 - grain yield per plant, TO:0000625 - spikelet density, TO:0000456 - spikelet number, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0000227 - root length, TO:0000316 - photosynthetic ability, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000460 - light intensity sensitivity, TO:0000249 - leaf senescence, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006002 - proline content","PO:0001083 - inflorescence development stage , PO:0009046 - flower , PO:0025313 - tapetum , PO:0020048 - microspore , PO:0001004 - anther development stage ","Os04g0398000","LOC_Os04g32620.1",{"$nulls":6},"SAR1C","OsARL1d, ARL1d, OsSar1c, Sar1c","SECRETION-ASSOCIATED, RAS-RELATED PROTEIN 1C","ARF-like protein 1d, \\secretion-associated, Ras-related protein1c\\\"\"",1," Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances","GO:0005525 - GTP binding, GO:0005794 - Golgi apparatus, GO:0006886 - intracellular protein transport, GO:0007264 - small GTPase mediated signal transduction, GO:0048623 - seed germination on parent plant, GO:0005783 - endoplasmic reticulum, GO:0016192 - vesicle-mediated transport","TO:0000104 - floury endosperm, TO:0000490 - protein composition related trait, TO:0002653 - endosperm storage protein content, TO:0000100 - shrunken endosperm, TO:0000390 - grain core percent white, TO:0000202 - germination ratio",null,"Os01g0254000","LOC_Os01g15010.1",{"$nulls":6},"qRCT7","qRCT7","COLD TOLERANCE","cold tolerance",null," Tolerance and resistance - Stress tolerance",{"$nulls":6},"Os07g0164900","Os05g0565900",-1.2161306,0]
[{"$nulls":24},"Os06g0320500","Os05g0163100","Os05g0163100",-1.2592455,0,null,"Os04g0641400",3.0397599,"Os04g0606000",-1.0785271,{"$nulls":29},"BZIP12","OsbZIP12, OsABF1, ABF1, OsOSE2, OSE2, OsbZIP12/OsABF1","b-ZIP TRANSCRIPTION FACTOR 12","b-ZIP transcription factor 12, ABA responsive element binding factor 1, ORGAN SPECIFIC ELEMENT 2",1," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0010187 - negative regulation of seed germination, GO:0009740 - gibberellic acid mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0043565 - sequence-specific DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0010336 - gibberellic acid homeostasis, GO:0010373 - negative regulation of gibberellin biosynthetic process, GO:0009414 - response to water deprivation","TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait, TO:0002675 - gibberellic acid content, TO:0000166 - gibberellic acid sensitivity, TO:0000430 - germination rate","PO:0007057 - 0 seed germination stage ","Os01g0867300","LOC_Os01g64730.1, LOC_Os01g64730.2",{"$nulls":24},"SAR1A","OsARL1e, ARL1e, OsSar1b, Sar1b, OsSar1a, Sar1a","SECRETION-ASSOCIATED, RAS-RELATED PROTEIN 1A","ARF-like protein 1e, \\secretion-associated, Ras-related protein1a\\\"\"",1," Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances","GO:0005794 - Golgi apparatus, GO:0007264 - small GTPase mediated signal transduction, GO:0016192 - vesicle-mediated transport, GO:0048623 - seed germination on parent plant, GO:0005525 - GTP binding, GO:0005783 - endoplasmic reticulum, GO:0006886 - intracellular protein transport","TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content, TO:0000390 - grain core percent white, TO:0000100 - shrunken endosperm, TO:0000490 - protein composition related trait, TO:0000202 - germination ratio",null,"Os01g0338000 ","LOC_Os01g23620.1",{"$nulls":6},"RA8","OsBURP15, BURP15","ANTHER-SPECIFIC PROTEIN 8","BURP domain-containing protein 15, Anther-specific protein 8",9," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009555 - pollen development",null,null,"Os09g0480900","LOC_Os09g30320.1",null,"Os05g0150500","Os08g0206900",-1.2175723,0]
[{"$nulls":24},"Os03g0135700","Os02g0764700","Os02g0764700",2.0155592,0,null,"Os05g0291700",3.0340073,"Os09g0439600",-1.0782857,{"$nulls":29},"BZIP48","OsbZIP48, OsHY5, HY5","b-ZIP TRANSCRIPTION FACTOR 48","b-ZIP transcription factor 48, ELONGATED HYPOCOTYL 5",6," Vegetative organ - Culm,  Coloration - Anthocyanin,  Seed - Morphological traits,  Other","GO:0003700 - transcription factor activity, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0032502 - developmental process, GO:0005634 - nucleus, GO:0003677 - DNA binding","TO:0000486 - seed color, TO:0000207 - plant height, TO:0000071 - anthocyanin content","PO:0007632 - seed maturation stage ","Os06g0601500","LOC_Os06g39960.1",{"$nulls":24},"SAR1B","OsARL1f, ARL1f, OsSar1b, Sar1b","SECRETION-ASSOCIATED, RAS-RELATED PROTEIN 1B","ARF-like protein 1f, \\secretion-associated, Ras-related protein1b\\\"\"",12," Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009269 - response to desiccation, GO:0005783 - endoplasmic reticulum, GO:0005794 - Golgi apparatus, GO:0006886 - intracellular protein transport, GO:0007264 - small GTPase mediated signal transduction, GO:0009414 - response to water deprivation, GO:0005525 - GTP binding, GO:0009651 - response to salt stress, GO:0016192 - vesicle-mediated transport, GO:0048623 - seed germination on parent plant","TO:0000100 - shrunken endosperm, TO:0000490 - protein composition related trait, TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000202 - germination ratio, TO:0000390 - grain core percent white",null,"Os12g0560300 ","LOC_Os12g37360.1",{"$nulls":6},"RAB16A","Rab16A, rab21, RAB21, OsRab21, OsRAB21, OsRAB-21, OsRab16A, OsLEA29, rab16A, OsRAB16A","RESPONSIVE TO ABA GENE 16A","RAB(responsive to ABA) gene 16A, RAB gene 16A, late embryogenesis abundant protein 29, responsive to ABA protein 21",11," Tolerance and resistance - Stress tolerance,  Other","GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0006950 - response to stress, GO:0009415 - response to water, GO:0009737 - response to abscisic acid stimulus","TO:0000237 - water stress trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity",null," Os11g0454300","LOC_Os11g26790.1",null,"Os11g0186500","Os06g0327300",-1.2194057,0]
[{"$nulls":24},"Os03g0112900","Os04g0572400","Os04g0572400",1.0779666,0,null,"Os01g0726400",3.0321162,"Os09g0242600",-1.0781969,{"$nulls":29},"RSS1",null,"RICE SALT SENSITIVE 1",null,2," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress","TO:0000207 - plant height, TO:0000227 - root length, TO:0006001 - salt tolerance",null,"Os02g0606700","LOC_Os02g39390.1, LOC_Os02g39390.2",{"$nulls":24},"HDA705","OsHDA705","HISTONE DEACETYLASE 705","histone deacetylase 705",8," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006351 - transcription, DNA-dependent, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0032041 - NAD-dependent histone deacetylase activity (H3-K14 specific), GO:0009845 - seed germination, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009628 - response to abiotic stimulus, GO:0009413 - response to flooding, GO:0009738 - abscisic acid mediated signaling, GO:0042742 - defense response to bacterium, GO:0009617 - response to bacterium","TO:0000102 - phosphorus sensitivity, TO:0000168 - abiotic stress trait, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os08g0344100","LOC_Os08g25570.1",{"$nulls":6},"PIKM","Pik-m, Pi-m, Pi-km, Pikm, Pi m, Pikm1-TS, Pikm2-TS, Pi-km1, Pi-km2","PYRICULARIA ORYZAE RESISTANCE KM","Pyricularia oryzae resistance KM, Magnaporthe grisea resistance km, Blast resistance km",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus, GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0017111 - nucleoside-triphosphatase activity, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0005524 - ATP binding",null,null,"Os11g0688832/Os11g0689100","LOC_Os11g46210.1, LOC_Os11g46200.1",null,"Os06g0703900","Os09g0471900",-1.2242223,0]
[{"$nulls":24},"Os08g0481400","Os06g0166400","Os06g0166400",-1.2550154,0,null,"Os03g0718500",3.0313025,"Os07g0636900",-1.0778502,{"$nulls":29},"GRF3","OsGRF3","GROWTH-REGULATING FACTOR 3","growth-regulating factor3",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0009739 - response to gibberellin stimulus, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","TO:0000166 - gibberellic acid sensitivity, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000074 - blast disease","PO:0000025 - root tip , PO:0000037 - shoot apex , PO:0009005 - root , PO:0009009 - plant embryo ","Os04g0600900","LOC_Os04g51190.3, LOC_Os04g51190.2, LOC_Os04g51190.1",{"$nulls":24},"NPC1","OsNPC1","NON-SPECIFIC PHOSPHOLIPASE C1 ","Non-specific phospholipase C1",3," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Shattering,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0005737 - cytoplasm, GO:0009651 - response to salt stress, GO:0006651 - diacylglycerol biosynthetic process, GO:0009414 - response to water deprivation, GO:0016788 - hydrolase activity, acting on ester bonds","TO:0000303 - cold tolerance, TO:0002641 - acid detergent fiber, TO:0000473 - grain shattering, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000061 - node shattering",null,"Os03g0826600","LOC_Os03g61130.1",{"$nulls":6},"PIKP","Pik-p, Pi-kp, Pikp, Pikp-1, Pikp-2","PYRICULARIA ORYZAE RESISTANCE KP","Pyricularia oryzae resistance KP, Magnaporthe grisea resistance kp, Blast resistance kp",11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0009620 - response to fungus, GO:0017111 - nucleoside-triphosphatase activity, GO:0005524 - ATP binding",{"$nulls":5},"Os07g0667000","Os02g0128400",-1.2294267,0]
[{"$nulls":24},"Os03g0343900","Os02g0656600","Os02g0656600",1.982606,0,null,"Os05g0272800",3.0277631,"Os01g0652600",-1.0777134,{"$nulls":29},"GS2","OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2, GS2/GL2, LGS1, OsLGS1","GRAIN SIZE 2","growth-regulating factor4, Growth-Regulating Factor 4, GRAIN SIZE ON CHROMOSOME 2, PANICLE TRAITS 2, grain length and width 2, Large Grain Size 1",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009755 - hormone-mediated signaling, GO:0009409 - response to cold, GO:0030307 - positive regulation of cell growth, GO:0030308 - negative regulation of cell growth, GO:0080006 - internode patterning, GO:0040008 - regulation of growth, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0009739 - response to gibberellin stimulus, GO:0051302 - regulation of cell division, GO:0002213 - defense response to insect, GO:0051781 - positive regulation of cell division, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0051510 - regulation of unidimensional cell growth","TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000653 - seed development trait, TO:0000271 - inflorescence length, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000473 - grain shattering, TO:0000734 - grain length, TO:0000621 - inflorescence development trait, TO:0000166 - gibberellic acid sensitivity, TO:0000382 - 1000-seed weight, TO:0000424 - brown planthopper resistance, TO:0000040 - panicle length, TO:0000303 - cold tolerance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000402 - grain width, TO:0000074 - blast disease, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0701300","LOC_Os02g47280.2, LOC_Os02g47280.1",{"$nulls":24},"_","OsBDG1, BDG1","_","OsBUL1 DOWNSTREAM GENE1, OsBUL1 DOWNSTREAM GENE 1, BUL1 DOWNSTREAM GENE1, BUL1 DOWNSTREAM GENE 1",11," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009651 - response to salt stress, GO:0016301 - kinase activity, GO:0009609 - response to symbiotic bacterium","TO:0000397 - grain size, TO:0000206 - leaf angle, TO:0006001 - salt tolerance","PO:0009049 - inflorescence , PO:0020039 - leaf lamina ","Os11g0514400 ","LOC_Os11g31530.1",{"$nulls":6},"PIY2","Pi-y2, Pi-y2(t), Pi-y1(t), Piy2(t), Pi-y(t)","PYRICULARIA GRISEA RESISTANCE Y 2","Pyricularia oryzae resistance y2, Magnaporthe grisea resistance y2, Blast resistancey2",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os03g0126000","Os10g0389000",-1.2404741,0]
[{"$nulls":25},"Os05g0316800","Os05g0316800",-2.6692026,0,null,"Os04g0570800",3.0254219,"Os03g0113800",-1.0770655,{"$nulls":29},"GRF6","OsGRF6","GROWTH-REGULATING FACTOR 6","growth-regulating factor6, GROWTH REGULATING FACTOR 6",3," Biochemical character,  Vegetative organ - Culm,  Seed,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009937 - regulation of gibberellic acid mediated signaling, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0051510 - regulation of unidimensional cell growth, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus","TO:0000653 - seed development trait, TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000240 - sterile lemma length, TO:0000396 - grain yield, TO:0006022 - floral organ development trait, TO:0000074 - blast disease, TO:0000620 - embryo development trait","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0009009 - plant embryo ","Os03g0729500","LOC_Os03g51970.1",{"$nulls":24},"RAE2 ","OsEPFL1, EPFL1, GAD1, OsGAD1, OsRAE2, GLA, OsGLA, GAD1/RAE2","REGULATOR OF AWN ELONGATION 2 ","EPIDERMAL PATTERNING FACTOR-LIKE 1, Regulator of Awn Elongation 2, \\GRAIN NUMBER, GRAIN LENGTH AND AWN DEVELOPMENT1\\\", Grain Length and Awn Development\"",8," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010052 - guard cell differentiation","TO:0000072 - awn length, TO:0002734 - awn presence, TO:0002759 - grain number, TO:0000734 - grain length, TO:0002656 - starch grain shape, TO:0000266 - chalky endosperm, TO:0000162 - seed quality",null,"Os08g0485500 ","LOC_Os08g37890.1",{"$nulls":6},"PIZT","Piz-t, Pi-zt, Pi-z(t), Pi2/Pizt, Pizt, Pi9, OsPiz-t","PYRICULARIA ORYZAE RESISTANCE ZT","Pyricularia oryzae resistance zt, Magnaporthe grisea resistance zt, Blast resistance zt",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus, GO:0050832 - defense response to fungus, GO:0001906 - cell killing, GO:0006952 - defense response, GO:0043531 - ADP binding","TO:0000074 - blast disease",null,"Os06g0286700","LOC_Os06g17900.1",null,"Os03g0145200","Os02g0621700",-1.2405262,0]
[{"$nulls":25},"Os10g0390800","Os10g0390800",4.012246,0,null,"Os03g0214200",3.0248775,"Os12g0566300",-1.0757799,{"$nulls":29},"GRF10","OsGRF10","GROWTH-REGULATING FACTOR 10","growth-regulating factor10",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0009739 - response to gibberellin stimulus, GO:0005524 - ATP binding, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0006022 - floral organ development trait, TO:0000240 - sterile lemma length","PO:0009009 - plant embryo ","Os02g0678800","LOC_Os02g45570.1, LOC_Os02g45570.2",{"$nulls":24},"DPE1","OsDPE1, OsDpe1, Dpe1","DISPROPORTIONATING ENZYME 1","disproportionating enzyme 1",7," Biochemical character,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009507 - chloroplast, GO:0009501 - amyloplast, GO:0004134 - 4-alpha-glucanotransferase activity, GO:0009312 - oligosaccharide biosynthetic process, GO:0019252 - starch biosynthetic process","TO:0002658 - starch grain synthesis","PO:0009089 - endosperm ","Os07g0627000","LOC_Os07g43390.1",{"$nulls":6},"RBCS","rbcS, OsRbcS, RBCS-C, RbcS2, OsRBCS2, RbcS1, OsRbcS2, OsrbcS1","RUBISCO SMALL SUBUNIT","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"",12," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0016984 - ribulose-bisphosphate carboxylase activity, GO:0019253 - reductive pentose-phosphate cycle, GO:0009507 - chloroplast, GO:0055114 - oxidation reduction, GO:0009853 - photorespiration, GO:0004497 - monooxygenase activity","TO:0000457 - total biomass yield, TO:0001015 - photosynthetic rate, TO:0000011 - nitrogen sensitivity, TO:0000396 - grain yield",null,"Os12g0274700","LOC_Os12g17600.2, LOC_Os12g17600.1",null,"Os11g0176200","Os03g0858400",-1.2420529,0]
[{"$nulls":25},"Os05g0497300","Os05g0497300",-1.2003808,0,null,"Os01g0563000",3.0229423,"Os07g0647900",-1.075765,{"$nulls":29},"GRF5","OsGRF5","GROWTH-REGULATING FACTOR 5","growth-regulating factor5",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed,  Tolerance and resistance - Disease resistance,  Other","GO:0009739 - response to gibberellin stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016563 - transcription activator activity","TO:0000074 - blast disease, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000653 - seed development trait","PO:0000025 - root tip , PO:0000037 - shoot apex , PO:0009009 - plant embryo ","Os06g0116200","LOC_Os06g02560.3, LOC_Os06g02560.2, LOC_Os06g02560.1",{"$nulls":24},"NPF2.4","OsNPF2.4, OsPTR2, PTR2","NRT1/PTR FAMILY 2.4","NRT1/PTR family 2.4, NO3-/peptide transporter family 2.4",3," Biochemical character,  Seed - Physiological traits,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0080055 - low affinity nitrate transport, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0005215 - transporter activity, GO:0009651 - response to salt stress, GO:0055078 - sodium ion homeostasis, GO:0055081 - anion homeostasis","TO:0000008 - potassium sensitivity, TO:0000345 - seed viability, TO:0006001 - salt tolerance, TO:0000114 - flooding related trait, TO:0000513 - potassium concentration","PO:0005679 - epidermis , PO:0020104 - leaf sheath , PO:0009005 - root ","Os03g0687000","LOC_Os03g48180.1, LOC_Os03g48180.2",{"$nulls":6},"RIR1B","Rir1b, Rir1a, OsRALF-28, OsRALF28, RALF-28, RALF28","RICE PATHOGEN-RELATED PROTEIN","Rice pathogen-related protein, Rapid alkalization factor 28",10," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus",null,null,"Os10g0569400","LOC_Os10g41980.1",null,"Os11g0117400","Os08g0109400",-1.2464423,0]
[{"$nulls":25},"Os02g0521100","Os02g0521100",-1.763897,0,null,"Os01g0286900",3.021725,"Os01g0102500",-1.0755864,{"$nulls":29},"BBX7","OsN, OsBBX7, OsCCT08, OsCCT8, OsDTH2, CCT08, CCT8, DTH2","_","CONSTANS-like gene N, B-box-containing protein 7, CCT domain-containing gene 8, CCT (CO, CO-LIKE and TOC1) domain protein 8, CCT domain protein 8",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0007623 - circadian rhythm, GO:0009409 - response to cold, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0008270 - zinc ion binding, GO:0010039 - response to iron ion, GO:0009739 - response to gibberellin stimulus, GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus, GO:0010045 - response to nickel ion","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0002616 - flowering time, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000224 - iron sensitivity","PO:0009010 - seed , PO:0009089 - endosperm , PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0007616 - flowering stage ","Os02g0724000","LOC_Os02g49230.4, LOC_Os02g49230.6, LOC_Os02g49230.5, LOC_Os02g49230.1, LOC_Os02g49230.2, LOC_Os02g49230.3",{"$nulls":24},"GLP2-1","OsGLP2-1","GERMIN-LIKE PROTEIN 2-1","Germin-like protein 2-1",2," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048046 - apoplast, GO:0033609 - oxalate metabolic process, GO:0030145 - manganese ion binding, GO:0046564 - oxalate decarboxylase activity, GO:0005618 - cell wall, GO:0010162 - seed dormancy, GO:0045735 - nutrient reservoir activity, GO:0009739 - response to gibberellin stimulus, GO:0005829 - cytosol, GO:0009740 - gibberellic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity","PO:0025374 - seed dormant stage , PO:0020110 - scutellum ","Os02g0491600","LOC_Os02g29000.1",{"$nulls":6},"RWCA","RWCA","RELATIVE WATER CONTENT","relative water content",null," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation",{"$nulls":5},"Os04g0684900","Os11g0153800",-1.2484313,0]
[{"$nulls":25},"Os08g0128200","Os08g0128200",-0.97076225,0,null,"Os09g0569900",3.0208502,"Os03g0270000",-1.075112,{"$nulls":29},"CHI3","gh1, GH1, OsGH1, OsCHI, Cfi, CHI, OsCHI3","CHALCONE ISOMERASE 3","gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase, chalcone-flavonone isomerase",3," Biochemical character,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Coloration - Others,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009813 - flavonoid biosynthetic process, GO:0048316 - seed development, GO:0045430 - chalcone isomerase activity, GO:0009411 - response to UV, GO:0009718 - anthocyanin biosynthetic process, GO:0009628 - response to abiotic stimulus, GO:0009809 - lignin biosynthetic process, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0009416 - response to light stimulus","TO:0000731 - lignin content, TO:0000396 - grain yield, TO:0000494 - pigment content, TO:0000534 - culm color, TO:0000653 - seed development trait, TO:0000075 - light sensitivity, TO:0000707 - pericarp color, TO:0000071 - anthocyanin content, TO:0000160 - UV light sensitivity, TO:0000051 - stem strength, TO:0000424 - brown planthopper resistance, TO:0000675 - ferulic acid content, TO:0000290 - flavonoid content, TO:0000733 - lignin biosynthesis trait, TO:0000168 - abiotic stress trait","PO:0025034 - leaf , PO:0001170 - seed development stage ","Os03g0819600","LOC_Os03g60509.2, LOC_Os03g60509.1",{"$nulls":24},"FSE1",null,"FLOURY SHRUNKEN ENDOSPERM 1","floury shrunken endosperm1",8," Seed - Physiological traits - Storage substances","GO:0004620 - phospholipase activity, GO:0046872 - metal ion binding, GO:0006644 - phospholipid metabolic process, GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0009506 - plasmodesma, GO:0009705 - plant-type vacuole membrane, GO:0009959 - negative gravitropism, GO:0009590 - detection of gravity, GO:0009660 - amyloplast organization","TO:0000602 - total fat content, TO:0000104 - floury endosperm","PO:0007633 - endosperm development stage ","Os08g0110700","LOC_Os08g01920.1",{"$nulls":6},"RWCW","RWCW","RELATIVE WATER CONTENT","relative water content",null," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation",{"$nulls":5},"Os06g0670000","Os07g0173700",-1.2497902,0]
[{"$nulls":25},"Os03g0182800","Os03g0182800",1.7790432,0,null,"Os04g0103400",3.020448,"Os10g0578800",-1.0750288,{"$nulls":29},"MIS2","OsCR4, CR4, OsMIS2","MINI SEED 2","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog",3," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0051302 - regulation of cell division, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0001558 - regulation of cell growth, GO:0005768 - endosome","TO:0000399 - grain thickness, TO:0000240 - sterile lemma length, TO:0002730 - grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006022 - floral organ development trait, TO:0000621 - inflorescence development trait, TO:0000734 - grain length","PO:0001083 - inflorescence development stage ","Os03g0637800","LOC_Os03g43670.1",{"$nulls":24},"PKPA1","OsPKpa1","PYRUVATE KINASE P ALPHA 1","Pyruvate kinase palpha1, plastidic PK alpha 1",7," Biochemical character,  Seed - Physiological traits - Storage substances","GO:0004743 - pyruvate kinase activity, GO:0019252 - starch biosynthetic process, GO:0008610 - lipid biosynthetic process, GO:0009501 - amyloplast, GO:0016301 - kinase activity, GO:0000287 - magnesium ion binding, GO:0005737 - cytoplasm, GO:0009570 - chloroplast stroma, GO:0030955 - potassium ion binding","TO:0000587 - endosperm quality, TO:0000696 - starch content, TO:0000104 - floury endosperm","PO:0009089 - endosperm ","Os07g0181000","LOC_Os07g08340.1, LOC_Os07g08340.2",{"$nulls":6},"RYMV1","Rymv1, eIF(iso)4G, OsRYMV1, OseIF(iso)4G, eIFiso4G","RESISTANCE TO YELLOW MOTTLE VIRUS-1","Rice yellow mottle virus resistant 1, Resistance to yellow mottle virus-1, eukaryotic translation initiation factor 4G, large subunit eIFiso4G",4," Tolerance and resistance - Disease resistance","GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0046739 - spread of virus in host, GO:0016281 - eukaryotic translation initiation factor 4F complex, GO:0006417 - regulation of translation, GO:0016070 - RNA metabolic process, GO:0051607 - defense response to virus, GO:0003743 - translation initiation factor activity, GO:0009615 - response to virus, GO:0003677 - DNA binding","TO:0000164 - stress trait, TO:0000088 - rice yellow mottle virus resistance","PO:0000007 - leaf-derived cultured plant cell , PO:0009025 - vascular leaf ","Os04g0499300","LOC_Os04g42140.1",null,"Os03g0281600","Os04g0644800",-1.2530106,0]
[{"$nulls":25},"Os02g0676800","Os02g0676800",1.4541901,0,null,"Os10g0542400",3.018112,"Os04g0662100",-1.0731497,{"$nulls":29},"_","OsTEF1","_","Transcription Elongation Factor 1",2," Vegetative organ - Culm",{"$nulls":3},"Os02g0134300","LOC_Os02g04160.1, LOC_Os02g04160.2",{"$nulls":24},"FLO13","OsNDUFA9, NDUFA9","FLOURY ENDOSPERM 3","Mitochondrial complex I accessory subunit OsNDUFA9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, floury endosperm 3",2," Biochemical character,  Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0005739 - mitochondrion, GO:0050662 - coenzyme binding, GO:0003954 - NADH dehydrogenase activity, GO:0009651 - response to salt stress, GO:0005747 - mitochondrial respiratory chain complex I, GO:0009790 - embryonic development, GO:0019252 - starch biosynthetic process","TO:0000104 - floury endosperm, TO:0002658 - starch grain synthesis, TO:0000592 - 1000-dehulled grain weight",null,"Os02g0816800","LOC_Os02g57180.2, LOC_Os02g57180.1",{"$nulls":6},"SODCC1","sodCc1, SODCC.1, sodA, RSODA, OsSOD1, OsCSD2, OsSodA, SodCc2, OsSODA1, SODCc1-Cu/Zn, OsCu/Zn-SOD2, Cu/Zn-SOD2, OsCSD1.2, CSD1.2, OsSODCc1-Cu/Zn, SODCc1-Cu/Zn, CuZnSOD1, Cu/ZnSOD1, OsCu/ZnSOD1, OsCSD4, CDS4, CuZnSOD4","CYTOSOLIC SUPEROXIDASE DISMUTASE","cytosolic superoxidase dismutase, Superoxide dismutase [Cu-Zn] 1, Cytosolic Cu/Zn-siperoxide dismutase, rice Cu/Zn-SOD, Cu/Zn-SOD, Cytosolic Copper/Zinc-Superoxide Dismutase 1, \\Superoxide dismutase (Cu-Zn) 4, cytosolic\\\", Cu-dependent SOD 1.2\"",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0006979 - response to oxidative stress, GO:0042742 - defense response to bacterium, GO:0016209 - antioxidant activity, GO:0008270 - zinc ion binding, GO:0006801 - superoxide metabolic process, GO:0009651 - response to salt stress, GO:0000303 - response to superoxide, GO:0005737 - cytoplasm, GO:0010039 - response to iron ion, GO:0009409 - response to cold, GO:0005829 - cytosol, GO:0010193 - response to ozone, GO:0019430 - removal of superoxide radicals, GO:0046688 - response to copper ion, GO:0004784 - superoxide dismutase activity, GO:0005507 - copper ion binding","TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000605 - hydrogen peroxide content","PO:0025034 - leaf , PO:0005052 - plant callus , PO:0009025 - vascular leaf , PO:0009010 - seed , PO:0009005 - root ","Os03g0351500","LOC_Os03g22810.1",null,"Os03g0351100","Os09g0370500",-1.2578877,0]
[{"$nulls":25},"Os09g0286600","Os09g0286600",-2.72472,0,null,"Os02g0129300",3.0132911,"Os01g0621900",-1.0719166,{"$nulls":29},"DRM2","OsDRM2, osdrm2, DRM2-1","DOMAINS REARRANGED METHYLTRANSFERASE 2","domains rearranged methyltransferase 2, domains rearranged methylase 2",3," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Pollination, fertilization, fertility - Sterility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003677 - DNA binding, GO:0006306 - DNA methylation, GO:0010426 - DNA methylation on cytosine within a CHH sequence, GO:0006346 - methylation-dependent chromatin silencing, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0051567 - histone H3-K9 methylation, GO:0050832 - defense response to fungus, GO:0008168 - methyltransferase activity","TO:0000262 - panicle shape, TO:0002616 - flowering time, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000485 - sterility related trait, TO:0000657 - spikelet anatomy and morphology trait",null,"Os03g0110800","LOC_Os03g02010.4",{"$nulls":24},"TGW3","GL3.3, OsSK41, SK41, OsGSK5, GSK5, qTGW3, OsTGW3, OsGSK5/OsSK41, OsSK41/OsGSK5, GL3.3/TGW3","THOUSAND GRAIN WEIGHT 3","GSK3/SHAGGY-Like Kinase 41, QTL FOR THOUSAND GRAIN WEIGHT ON CHROMOSOME 3, GSK3-like Kinase 5, Glycogen Synthase Kinase-like 5, thousand grain weight 3",3," Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010233 - phloem transport, GO:0009651 - response to salt stress, GO:0005982 - starch metabolic process, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0005975 - carbohydrate metabolic process, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010928 - regulation of auxin mediated signaling pathway","TO:0000397 - grain size, TO:0000175 - bacterial blight disease resistance, TO:0000696 - starch content, TO:0006001 - salt tolerance, TO:0000163 - auxin sensitivity, TO:0000653 - seed development trait, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000391 - seed size","PO:0009005 - root , PO:0001170 - seed development stage ","Os03g0841800","LOC_Os03g62500.1",{"$nulls":6},"SIP2A","Sip2A, ARD 2, ARD2, OsARD2, OsARD, IDI1, OsIDI1","SUBMERGENCE-INDUCED PROTEIN 2A","submergence-induced protein 2A, 1, 2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2, Aci-reductone dioxygenase 2, Submergence-induced protein 2A, acireductone dioxygenase 2, submergence-induced protein2A, aci-reductone-dioxygenase-like protein, Fe-deficiency-induced protein 1",3," Tolerance and resistance - Stress tolerance","GO:0010106 - cellular response to iron ion starvation, GO:0034224 - cellular response to zinc ion starvation, GO:0005506 - iron ion binding, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0010309 - acireductone dioxygenase [iron(II)-requiring] activity, GO:0046872 - metal ion binding, GO:0055114 - oxidation reduction, GO:0019509 - methionine salvage","TO:0000351 - zinc sensitivity, TO:0000224 - iron sensitivity",null,"Os03g0161800","LOC_Os03g06620.1",null,"Os12g0176700","Os01g0827500",-1.2580105,0]
[{"$nulls":25},"Os03g0183000","Os03g0183000",-1.3754607,0,null,"Os02g0730000",3.0123825,"Os02g0801600",-1.0712675,{"$nulls":29},"RPH1","OsERF#052, OsERF052, OsERF52, ERF52, AP2/EREBP#053, AP2/EREBP53, OsRPH1","REDUCED PLANT HEIGHT 1","ethylene response factor 52, APETALA2/ethylene-responsive element binding protein 53, Reduced Plant Height 1",5," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0009637 - response to blue light, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent","TO:0002675 - gibberellic acid content, TO:0000145 - internode length, TO:0000159 - blue light sensitivity, TO:0000207 - plant height, TO:0002689 - leaf sheath length",null,"Os05g0572000","LOC_Os05g49700.1",{"$nulls":24},"_","MEG2, OsMEG2","_","Maternally Expressed Gene2",7," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0048316 - seed development","TO:0000146 - seed length, TO:0000149 - seed width, TO:0000304 - seed thickness, TO:0000382 - 1000-seed weight, TO:0000064 - embryo related trait, TO:0000696 - starch content","PO:0001170 - seed development stage ","Os07g0296900","LOC_Os07g20110.1",{"$nulls":6},"SPS1","sps1, OsSPS1, SPS","SUCROSE PHOSPHATE SYNTHASE","sucrose phosphate synthase, Probable sucrose-phosphate synthase, UDP-glucose-fructose-phosphate glucosyltransferase, sucrose phosphate synthase 1",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009413 - response to flooding, GO:0005986 - sucrose biosynthetic process, GO:0046524 - sucrose-phosphate synthase activity, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process","TO:0000286 - submergence sensitivity",null,"Os01g0919400","LOC_Os01g69030.4, LOC_Os01g69030.3, LOC_Os01g69030.2, LOC_Os01g69030.1",null,"Os06g0270900","Os02g0713400",-1.2587738,0]
[{"$nulls":25},"Os09g0522200","Os09g0522200",-1.3784245,0,null,"Os06g0647100",3.0123532,"Os05g0301500",-1.0711902,{"$nulls":29},"ERF83","OsERF#083, OsERF083, OsERF83, AP2/EREBP#163, AP2/EREBP163","ETHYLENE RESPONSE FACTOR 83","ethylene response factor 83, APETALA2/ethylene-responsive element binding protein 163",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Other","GO:0009414 - response to water deprivation, GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009607 - response to biotic stimulus","TO:0000040 - panicle length, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000576 - stem length, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000179 - biotic stress trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000447 - filled grain number","PO:0009047 - stem , PO:0025034 - leaf , PO:0009005 - root , PO:0009015 - portion of vascular tissue ","Os03g0860100","LOC_Os03g64260.1",{"$nulls":24},"2ODD10","2-ODD10, Os2-ODD10, Os2ODD10","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 10","2-oxoglutarate-dependent dioxygenase 10",6," Biochemical character,  Coloration,  Seed - Morphological traits","GO:0009962 - regulation of flavonoid biosynthetic process, GO:0051213 - dioxygenase activity, GO:0005777 - peroxisome, GO:0046872 - metal ion binding","TO:0000290 - flavonoid content",null,"Os06g0162500","LOC_Os06g06720.1",{"$nulls":6},"TRXH","trxh, Trx-H, OsTRXh1, TRXh1, OsTrxh1, Os1, OsTrx23, Trx23, RPP13-1","THIOREDOXIN H-TYPE","Thioredoxin H-type, Phloem sap 13 kDa protein 1, phloem protein13-1, h-type thioredoxin 1, thioredoxin h1",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045454 - cell redox homeostasis, GO:0005737 - cytoplasm, GO:0015035 - protein disulfide oxidoreductase activity, GO:0051775 - response to redox state, GO:0006952 - defense response, GO:0022900 - electron transport chain, GO:0006662 - glycerol ether metabolic process, GO:0006810 - transport, GO:0050832 - defense response to fungus, GO:0009055 - electron carrier activity","TO:0000112 - disease resistance, TO:0000074 - blast disease",null,"Os07g0186000","LOC_Os07g08840.1, LOC_Os07g08840.2, LOC_Os07g08840.3",null,"Os02g0198700","Os05g0501700",-1.260571,0]
[{"$nulls":25},"Os05g0361700","Os05g0361700",4.630455,0,null,"Os01g0749200",3.0105135,"Os03g0780400",-1.0711025,{"$nulls":29},"RGB1","OsWD40-80, RGbeta1, OsRGB1","RICE G PROTEIN BETA SUBUNIT 1","heterotrimeric G protein beta 1 subunit, heterotrimeric G protein b-subunit 1, G protein beta subunit 1",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0048573 - photoperiodism, flowering, GO:0008219 - cell death, GO:0009887 - organ morphogenesis, GO:0048316 - seed development, GO:0010252 - auxin homeostasis, GO:0010600 - regulation of auxin biosynthetic process, GO:0009723 - response to ethylene stimulus, GO:0048367 - shoot development, GO:0010431 - seed maturation, GO:0004871 - signal transducer activity, GO:0005783 - endoplasmic reticulum, GO:0009651 - response to salt stress, GO:0048527 - lateral root development, GO:0009409 - response to cold, GO:0010581 - regulation of starch biosynthetic process, GO:0009817 - defense response to fungus, incompatible interaction, GO:0005985 - sucrose metabolic process, GO:0048364 - root development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009790 - embryonic development, GO:0010154 - fruit development, GO:0009845 - seed germination, GO:0080008 - CUL4 RING ubiquitin ligase complex, GO:0030968 - endoplasmic reticulum unfolded protein response","TO:0000357 - growth and development trait, TO:0000656 - root development trait, TO:0000620 - embryo development trait, TO:0002672 - auxin content, TO:0000696 - starch content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000430 - germination rate, TO:0000639 - seed fertility, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000152 - panicle number, TO:0000137 - days to heading, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000064 - embryo related trait","PO:0007631 - plant embryo stage , PO:0007131 - seedling development stage , PO:0007520 - root development stage , PO:0001170 - seed development stage , PO:0007632 - seed maturation stage , PO:0025527 - shoot system development stage ","Os03g0669200","LOC_Os03g46650.1",{"$nulls":24},"ARP6","OsARP6","ACTIN RELATED PROTEIN 6",null,1," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009910 - negative regulation of flower development, GO:0080006 - internode patterning, GO:0051726 - regulation of cell cycle, GO:0009266 - response to temperature stimulus, GO:0006970 - response to osmotic stress, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006952 - defense response, GO:0006338 - chromatin remodeling, GO:0008283 - cell proliferation, GO:0006950 - response to stress, GO:0005634 - nucleus, GO:0010431 - seed maturation, GO:0048316 - seed development","TO:0000207 - plant height, TO:0000145 - internode length, TO:0000495 - chlorophyll content, TO:0000657 - spikelet anatomy and morphology trait, TO:0000485 - sterility related trait, TO:0002768 - spikelet length, TO:0002661 - seed maturation, TO:0000653 - seed development trait, TO:0000135 - leaf length, TO:0000346 - tiller number, TO:0000639 - seed fertility","PO:0009010 - seed , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0020148 - shoot apical meristem , PO:0009047 - stem , PO:0009005 - root ","Os01g0269900","LOC_Os01g16414.1, LOC_Os01g16414.4, LOC_Os01g16414.3, LOC_Os01g16414.2",{"$nulls":6},"W7LD","W7LD",{"$nulls":3}," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation",{"$nulls":5},"Os06g0116800","Os02g0469600",-1.2619356,0]
[{"$nulls":25},"Os07g0410300","Os07g0410300",-1.8065399,0,null,"Os05g0375600",3.0088902,"Os11g0629600",-1.0702428,{"$nulls":29},"BIN2","GSK2, Os GSK2, OsGSK2, Os BIN2, OsBIN2, BIN2/GSK2, OsSK22/OsGSK7, OsSK22, OsGSK7, SK22, GSK7, OsSK22/GSK2","BRASSINOSTEROID-INSENSITIVE 2","GSK3/SHAGGY-Like Kinase 2, GSK3/SHAGGY-LIKE KINASE2, BRASSINOSTEROID-INSENSITIVE2, GSK3/SHAGGY-Like Kinase 22, GSK3-like Kinase 7, Shaggy/GSK3-like kinase 22",5," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0009729 - detection of brassinosteroid stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0005737 - cytoplasm, GO:0009742 - brassinosteroid mediated signaling, GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0045926 - negative regulation of growth, GO:0042538 - hyperosmotic salinity response, GO:0046827 - positive regulation of protein export from nucleus, GO:0009965 - leaf morphogenesis, GO:0005829 - cytosol, GO:0051607 - defense response to virus, GO:0009733 - response to auxin stimulus, GO:0009825 - multidimensional cell growth, GO:0009739 - response to gibberellin stimulus","TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0002676 - brassinosteroid content, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length",null,"Os05g0207500","LOC_Os05g11730.1",{"$nulls":24},"G","OsG","_",null,3," Seed - Physiological traits - Dormancy","GO:0016021 - integral to membrane, GO:0010162 - seed dormancy","TO:0000253 - seed dormancy",null,"Os03g0100030","LOC_Os03g01014.1",{"$nulls":6},"W7LR","W7LR",{"$nulls":3}," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation",{"$nulls":5},"Os05g0408200","Os01g0536000",-1.2639235,0]
[{"$nulls":25},"Os01g0968800","Os01g0968800",2.773338,0,null,"Os07g0194400",3.0070755,"Os03g0280000",-1.0695858,{"$nulls":29},"_","OsRab11F1, OsPRA2, PRA2, OsPra2","_","small GTP-binding protein OsRab11F1",6," Vegetative organ - Culm","GO:0005768 - endosome, GO:0005634 - nucleus, GO:0009741 - response to brassinosteroid stimulus, GO:0005525 - GTP binding, GO:0015031 - protein transport, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0009742 - brassinosteroid mediated signaling, GO:0009504 - cell plate, GO:0007264 - small GTPase mediated signal transduction","TO:0002677 - brassinosteroid sensitivity, TO:0000207 - plant height","PO:0020033 - coleoptile , PO:0009005 - root ","Os06g0714600","LOC_Os06g50060.1",{"$nulls":24},"_",null,"_","cupin domain containing protein, cupin",3," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0016021 - integral to membrane",null,null,"Os03g0197300","LOC_Os03g10110.1",{"$nulls":6},"W8RWC","W8RWC","W8RWC",null,null," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation",{"$nulls":5},"Os03g0644000","Os02g0618100",-1.2657009,0]
[{"$nulls":25},"Os04g0442000","Os04g0442000",1.3238521,0,null,"Os08g0476600",3.006776,"Os06g0275000",-1.0695515,{"$nulls":29},"MIR396A","miR396a, osa-miR396a, osa-MIR396aosa-miR396a-3p osa-miR396a-5p, OsmiR396a","MICRORNA396A","MICRORNA396a, osa-miRNA396a",2," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0042127 - regulation of cell proliferation, GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0009409 - response to cold, GO:0002213 - defense response to insect, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0009739 - response to gibberellin stimulus","TO:0000303 - cold tolerance, TO:0000424 - brown planthopper resistance, TO:0006036 - stem elongation, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000429 - salt sensitivity, TO:0000074 - blast disease","PO:0007089 - stem elongation stage ",{"$nulls":26},"MATE16","OsMATE16","MULTIDRUG AND TOXIC COMPOUND EXTRUSION 16","multidrug and toxic compound extrusion 16",3," Biochemical character,  Coloration - Anthocyanin,  Seed - Morphological traits","GO:0016021 - integral to membrane, GO:0005773 - vacuole, GO:0015297 - antiporter activity, GO:0006855 - multidrug transport, GO:0042910 - xenobiotic transporter activity","TO:0000071 - anthocyanin content",null,"Os03g0626700","LOC_Os03g42830.1",{"$nulls":6},"XTH10","OsXTH10","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 10","xyloglucan endotransglucosylase/hydrolase, xyloglucan endotransglucosylase 10",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0009733 - response to auxin stimulus, GO:0007568 - aging, GO:0005886 - plasma membrane, GO:0009505 - plant-type cell wall, GO:0005737 - cytoplasm, GO:0042545 - cell wall modification, GO:0048046 - apoplast, GO:0010411 - xyloglucan metabolic process, GO:0009612 - response to mechanical stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0080039 - xyloglucan endotransglucosylase activity, GO:0009408 - response to heat, GO:0009739 - response to gibberellin stimulus, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0080022 - primary root development, GO:0016762 - xyloglucan:xyloglucosyl transferase activity","TO:0006001 - salt tolerance",null,"Os06g0697000","LOC_Os06g48200.1",null,"Os08g0120000","Os09g0440300",-1.2694564,0]
[{"$nulls":25},"Os02g0141100","Os02g0141100",1.8167738,0,null,"Os01g0946500",3.0061905,"Os06g0232100",-1.0694047,{"$nulls":29},"CYP714B1","OsCYP714B1","P-450 714B1","Cytochrome P450 714B1",7," Biochemical character,  Vegetative organ - Culm","GO:0005506 - iron ion binding, GO:0020037 - heme binding, GO:0009055 - electron carrier activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity","TO:0002675 - gibberellic acid content, TO:0000207 - plant height",null,"Os07g0681300","LOC_Os07g48330.1",{"$nulls":24},"ACOT ","OsACOT","ACYL-COA THIOESTERASE","Acyl-CoA thioesterase",4," Biochemical character,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0047617 - acyl-CoA hydrolase activity, GO:0005777 - peroxisome, GO:0019217 - regulation of fatty acid metabolic process","TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000149 - seed width, TO:0000304 - seed thickness, TO:0000397 - grain size, TO:0002759 - grain number, TO:0002667 - abscisic acid content, TO:0002672 - auxin content, TO:0000592 - 1000-dehulled grain weight, TO:0000396 - grain yield","PO:0009005 - root , PO:0009010 - seed ","Os04g0436100","LOC_Os04g35590.1",{"$nulls":6},"XTH19","OsXTH19","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 19","xyloglucan endotransglucosylase/hydrolase, xyloglucan endotransglucosylase 19, xyloglucan endotransglucosylase/hydrolase 19",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0048046 - apoplast, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005618 - cell wall, GO:0009651 - response to salt stress, GO:0006073 - cellular glucan metabolic process, GO:0016762 - xyloglucan:xyloglucosyl transferase activity, GO:0040007 - growth","TO:0006001 - salt tolerance, TO:0000145 - internode length, TO:0000346 - tiller number, TO:0000135 - leaf length",null,"Os03g0108300","LOC_Os03g01800.1",null,"Os08g0112700","Os01g0842200",-1.2700797,0]
[{"$nulls":25},"Os08g0520500","Os08g0520500",1.4312531,0,null,"Os02g0675700",3.0017471,"Os02g0469200",-1.0693129,{"$nulls":29},"WOX4","OsWOX4, Os WOX4","WUSCHEL-LIKE HOMEOBOX 4","WUSCHEL-related homeobox 4, WUSCHEL-RELATED HOMEOBOX4",4," Vegetative organ - Shoot apical meristem(SAM),  Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0003700 - transcription factor activity, GO:0007275 - multicellular organismal development, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009959 - negative gravitropism, GO:0051510 - regulation of unidimensional cell growth, GO:0009635 - response to herbicide, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009555 - pollen development, GO:0008285 - negative regulation of cell proliferation, GO:0009414 - response to water deprivation, GO:0009790 - embryonic development, GO:0010073 - meristem maintenance, GO:0043565 - sequence-specific DNA binding","TO:0000167 - cytokinin sensitivity, TO:0006017 - meristem identity, TO:0000276 - drought tolerance, TO:0000620 - embryo development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000391 - seed size, TO:0000734 - grain length, TO:0002692 - root meristem development, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000058 - herbicide sensitivity, TO:0002693 - gravity response trait","PO:0009010 - seed , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os04g0649400","LOC_Os04g55590.1",{"$nulls":24},"_","pro13b.10","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0329001 ",{"$nulls":7},"XTH2","OsXTH2, XTR1, OsXTR1","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 2","xyloglucan endotransglucosylase/hydrolase, xyloglucan endotransglucosylase 2, XET-related gene 1",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0006073 - cellular glucan metabolic process, GO:0009505 - plant-type cell wall, GO:0009507 - chloroplast, GO:0009651 - response to salt stress, GO:0016762 - xyloglucan:xyloglucosyl transferase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0048046 - apoplast, GO:0009826 - unidimensional cell growth, GO:0009733 - response to auxin stimulus, GO:0009645 - response to low light intensity stimulus, GO:0009612 - response to mechanical stimulus, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance",null,"Os11g0539200","LOC_Os11g33270.1",null,"Os02g0198900","Os01g0375200",-1.2716187,0]
[{"$nulls":25},"Os08g0520550","Os08g0520550",1.4312531,0,null,"Os06g0662200",2.9997795,"Os09g0240850",-1.0691981,{"$nulls":29},"_","FOS1, OsCLE202, CLE202","_","FON2 SPARE1, CLV3/ESR-related 202, CLAVATA3/ENDOSPERM SURROUNDING REGION (ESR)-related (CLE) protein 202",2," Vegetative organ - Culm,  Vegetative organ - Root","GO:0030154 - cell differentiation, GO:0005576 - extracellular region, GO:0007275 - multicellular organismal development",null,null,"Os02g0324400","LOC_Os02g21890.1",{"$nulls":24},"LG1","OsLG1, OsUBP15, UBP15, OsUBP15/LG1, OsUBP7-1, UBP7-1","LARGE GRAIN 1","large grain1, large grain 1, ubiquitin-specific protease15, ubiquitin-specific processing protease 7-1",null," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0008285 - negative regulation of cell proliferation","TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000149 - seed width","PO:0009029 - stamen ","Os02g0244300","LOC_Os02g14730.1",{"$nulls":6},"XTH9","OsXTH9, OsXET9, XTH1, OsXTH1","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 9","xyloglucan endotransglucosylase/hydrolase, xyloglucan endotransglucosylase 9, xyloglucan endotransglycosylase 1, XYLOGLUCAN ENDOTRANSGLUCOSYLASE-HYDROLASE 9",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009741 - response to brassinosteroid stimulus, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0016762 - xyloglucan:xyloglucosyl transferase activity, GO:0009826 - unidimensional cell growth, GO:0006073 - cellular glucan metabolic process, GO:0005618 - cell wall, GO:0009753 - response to jasmonic acid stimulus, GO:0048046 - apoplast","TO:0002677 - brassinosteroid sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os04g0604300","LOC_Os04g51460.1",null,"Os06g0658900","Os09g0258600",-1.2727709,0]
[{"$nulls":25},"Os01g0927600","Os01g0927600",1.104102,0,null,"Os05g0386900",2.9994876,"Os03g0818800",-1.0689335,{"$nulls":29},"TAB1","Os WUS, WUS, OsWOX1, WOX1, OsWUS, OsTAB, TAB1/WUS, MOC3, MOC3/OsWUS, SRT1, MOC3/TAB1/SRT1, DC1, OsDC1","TILLERS ABSENT 1","WUSCHEL, WUSCHEL-related homeobox 1, WUSCHEL-LIKE HOMEOBOX 1, WUS Orthologue, TILLERS ABSENT1, MONOCULM 3, completely sterile and reduced tillering 1, decreased culm number 1",4," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009735 - response to cytokinin stimulus, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0048507 - meristem development, GO:0007275 - multicellular organismal development, GO:0009733 - response to auxin stimulus, GO:0010229 - inflorescence development","TO:0000163 - auxin sensitivity, TO:0002660 - cytokinin content, TO:0000276 - drought tolerance, TO:0000152 - panicle number, TO:0000329 - tillering ability, TO:0000621 - inflorescence development trait, TO:0000436 - spikelet sterility, TO:0000456 - spikelet number, TO:0000215 - stamen anatomy and morphology trait, TO:0000180 - spikelet fertility, TO:0000346 - tiller number, TO:0000657 - spikelet anatomy and morphology trait, TO:0000358 - female sterility, TO:0000223 - pistil anatomy and morphology trait, TO:0000661 - tiller bud dormancy","PO:0001083 - inflorescence development stage , PO:0007073 - 2 formation of axillary shoot stage ","Os04g0663600","LOC_Os04g56780.1",{"$nulls":24},"FLA","UBP4-5, OsUBP4-5, OsUBP5, UBP5, OsFLA","FLOWER AND LEAF COLOR ABERRANT","ubiquitin-specific processing protease 4-5, flower and leaf color aberrant, Ubiquitin-specific protease 5",11," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016020 - membrane, GO:0048437 - floral organ development, GO:0048439 - flower morphogenesis, GO:0009658 - chloroplast organization, GO:0009908 - flower development, GO:0004843 - ubiquitin-specific protease activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0009555 - pollen development, GO:0016579 - protein deubiquitination","TO:0000072 - awn length, TO:0000495 - chlorophyll content, TO:0000622 - flower development trait, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color, TO:0000069 - variegated leaf, TO:0000455 - seed set percent, TO:0000209 - palea number, TO:0000734 - grain length, TO:0000614 - lemma shape","PO:0025060 - lamina , PO:0007615 - flower development stage , PO:0025395 - floral organ , PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009038 - palea , PO:0025034 - leaf , PO:0001007 - pollen development stage ","Os11g0473200","LOC_Os11g28360.1",{"$nulls":6},"WRKY1","OsWRKY1, OsWRKY1v2","WRKY GENE1","Rice WRKY gene1",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009408 - response to heat","TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os01g0246700","LOC_Os01g14440.1",null,"Os07g0572900","Os03g0215900",-1.2779297,0]
[{"$nulls":25},"Os04g0671900","Os04g0671900",1.6843008,0,null,"Os01g0139000",2.9922373,"Os11g0104933",-1.0688547,{"$nulls":29},"MIR530","miR530, Osa-miR530, OsmiR530, osa-MIR530, osa-miR530 osa-miR530-3p, osa-miR530-5p","MICRORNA530","MICRORNA530, osa-miRNA530, os-miRNA530",4," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000391 - seed size, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000455 - seed set percent, TO:0000470 - vascular tissue related trait, TO:0000546 - peduncle top diameter, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000050 - inflorescence branching, TO:0000557 - secondary branch number, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0020103 - flag leaf , PO:0005004 - shoot node , PO:0009009 - plant embryo , PO:0009010 - seed ",{"$nulls":26},"BC1L6","OsBC1L6, OsPCS8, PCS8","BRITTLE CULM-LIKE 6","BRITTLE CULM1-like 6, Brittle Culm 1-like 6, Phytochelatin synthase 8",7," Vegetative organ - Culm,  Seed,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0032951 - regulation of beta-glucan biosynthetic process, GO:0009960 - endosperm development, GO:0070492 - oligosaccharide binding, GO:0009664 - plant-type cell wall organization, GO:0052324 - cell wall cellulose biosynthetic process, GO:0009832 - plant-type cell wall biogenesis, GO:0046686 - response to cadmium ion, GO:0010043 - response to zinc ion, GO:0010215 - cellulose microfibril organization, GO:0046658 - anchored to plasma membrane","TO:0000351 - zinc sensitivity","PO:0009010 - seed , PO:0007633 - endosperm development stage ","Os07g0604300","LOC_Os07g41310.1",{"$nulls":6},"WRKY10","OsWRKY10","WRKY GENE 10","Rice WRKY gene10",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009408 - response to heat, GO:0043565 - sequence-specific DNA binding, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0009409 - response to cold","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000249 - leaf senescence, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os01g0186000","LOC_Os01g09100.1",null,"Os01g0142300","Os02g0535700",-1.2804078,0]
[{"$nulls":25},"Os05g0563400","Os05g0563400",2.2042835,0,null,"Os02g0457500",2.9919078,"Os01g0339900",-1.0687809,{"$nulls":29},"CYCA2;1","CycA2;1, CycA2;os;1, Orysa;CycA2;1, OsCYCA2;1, CYCA2.2","CYCLIN-A2-1","A-type cyclin 2;1",12," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root","GO:0042023 - DNA endoreduplication, GO:0048364 - root development, GO:0051301 - cell division, GO:0030154 - cell differentiation, GO:0010374 - stomatal complex development, GO:0000079 - regulation of cyclin-dependent protein kinase activity, GO:0048367 - shoot development, GO:0005634 - nucleus","TO:0000227 - root length, TO:0000207 - plant height, TO:0000566 - stomatal frequency",null,"Os12g0502300","LOC_Os12g31810.1",{"$nulls":24},"PPA6","OsPPa6, PPa6","INORGANIC PYROPHOSPHATASE 6","soluble inorganic pyrophosphatase 6, inorganic pyrophosphatase 6, PPase 6, sPPase 6, pyrophosphorylase 6",2," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010446 - response to alkalinity, GO:0006796 - phosphate metabolic process, GO:0000287 - magnesium ion binding, GO:0004427 - inorganic diphosphatase activity, GO:0006970 - response to osmotic stress, GO:0005737 - cytoplasm","TO:0000328 - sucrose content, TO:0000481 - alkali sensitivity, TO:0001027 - net photosynthetic rate, TO:0000495 - chlorophyll content, TO:0000696 - starch content, TO:0006002 - proline content, TO:0000333 - sugar content, TO:0000525 - sodium to potassium content ratio, TO:0000095 - osmotic response sensitivity, TO:0002673 - amino acid content, TO:0000207 - plant height, TO:0000143 - relative biomass, TO:0000442 - plant fresh weight, TO:0000180 - spikelet fertility, TO:0000396 - grain yield, TO:0002627 - fruit width",null,"Os02g0768600","LOC_Os02g52940.3, LOC_Os02g52940.2, LOC_Os02g52940.1",{"$nulls":6},"WRKY11","OsWRKY11, Dlf1, OsWRKY11.1, OsWRKY11.2","WRKY GENE11","Rice WRKY gene11, semidwarf and late flowering 1",1," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:2000028 - regulation of photoperiodism, flowering, GO:0009739 - response to gibberellin stimulus, GO:0009609 - response to symbiotic bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009408 - response to heat","TO:0000175 - bacterial blight disease resistance, TO:0000188 - drought sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000207 - plant height, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0002616 - flowering time, TO:0000259 - heat tolerance",null,"Os01g0626400","LOC_Os01g43650.1, LOC_Os01g43650.2",null,"Os02g0254700","Os01g0948100",-1.2841724,0]
[{"$nulls":25},"Os12g0479400","Os12g0479400",-1.1378107,0,null,"Os01g0229900",2.9902375,"Os11g0175900",-1.0685425,{"$nulls":29},"TIG1","OsTCP22, OsTCP15, TCP22, TCP15, OsTIG1","TILLER INCLINED GROWTH 1","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 22",8," Vegetative organ - Culm","GO:0005634 - nucleus, GO:0051512 - positive regulation of unidimensional cell growth","TO:0000567 - tiller angle",null,"Os08g0432300","LOC_Os08g33530.1",{"$nulls":24},"CNX6","OsCNX6","CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 6","cofactor for nitrate reductase and xanthine dehydrogenase 6",2," Biochemical character,  Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009688 - abscisic acid biosynthetic process, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0048623 - seed germination on parent plant, GO:0019008 - molybdopterin synthase complex, GO:0005829 - cytosol, GO:0032324 - molybdopterin cofactor biosynthetic process, GO:0030366 - Mo-molybdopterin synthase activity, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process","TO:0000095 - osmotic response sensitivity, TO:0000370 - leaf width, TO:0000253 - seed dormancy, TO:0006001 - salt tolerance, TO:0002661 - seed maturation, TO:0000492 - leaf shape","PO:0007057 - 0 seed germination stage , PO:0007632 - seed maturation stage , PO:0009010 - seed ","Os02g0140300","LOC_Os02g04740.1",{"$nulls":6},"WRKY12","OsWRKY12","WRKY GENE 12","Rice WRKY gene12",1," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response","TO:0000401 - plant growth hormone sensitivity, TO:0000112 - disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0624700","LOC_Os01g43550.1, LOC_Os01g43550.2",null,"Os01g0972000","Os02g0510000",-1.2896318,0]
[{"$nulls":25},"Os06g0183100","Os06g0183100",-0.9508479,0,null,"Os03g0305400",2.9881618,"Os03g0124000",-1.0684227,{"$nulls":29},"REP1","OsTCP24, REP1, TCP24, SDP1, SDP1/REP1, OsTb2, Tb2","RETARDED PALEA 1","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 24, RETARDED PALEA1, SMALL DEGENERATIVE PALEA 1, Teosinte branched 2",9," Vegetative organ - Culm,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus","TO:0000329 - tillering ability, TO:0000346 - tiller number","PO:0020141 - stem node ","Os09g0410500","LOC_Os09g24480.1",{"$nulls":24},"CNX1","OsCNX1","CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 1","cofactor for nitrate reductase and xanthine dehydrogenase 1",4," Biochemical character,  Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy","GO:0032324 - molybdopterin cofactor biosynthetic process, GO:0009688 - abscisic acid biosynthetic process, GO:0009845 - seed germination, GO:0048623 - seed germination on parent plant, GO:0005829 - cytosol, GO:0006777 - Mo-molybdopterin cofactor biosynthetic process, GO:0030366 - Mo-molybdopterin synthase activity, GO:0005524 - ATP binding, GO:0030151 - molybdenum ion binding, GO:0008940 - nitrate reductase activity, GO:0009734 - auxin mediated signaling pathway, GO:0010038 - response to metal ion","TO:0002661 - seed maturation, TO:0000492 - leaf shape, TO:0000370 - leaf width, TO:0000253 - seed dormancy",null,"Os04g0661600","LOC_Os04g56620.2, LOC_Os04g56620.1",{"$nulls":6},"WRKY13","OsWRKY13","WRKY GENE 13","Rice WRKY gene13",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009863 - salicylic acid mediated signaling pathway, GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0051607 - defense response to virus, GO:0030912 - response to deep water, GO:0002213 - defense response to insect","TO:0000205 - white-backed planthopper resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000175 - bacterial blight disease resistance, TO:0000524 - submergence tolerance",null,"Os01g0750100","LOC_Os01g54600.1",null,"Os03g0208500","Os01g0549700",-1.290534,0]
[{"$nulls":25},"Os02g0557800","Os02g0557800",1.7785755,0,null,"Os03g0118800",2.9872677,"Os05g0556900",-1.0675901,{"$nulls":29},"IAGLU","OsIAGLU, OsIAAGLU, IAAGLU, OsIAGT1, IAGT1, UGT74A2, OsUGT74A2","IAA-GLUCOSE SYNTHASE","IAA-glucose synthase, indole-3-acetic acid glucosyltransferase, IAA-glycosyltransferase, UDP-glucosyltransferase 74A2",3," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle","GO:0005829 - cytosol, GO:0080026 - response to indolebutyric acid stimulus, GO:0008194 - UDP-glycosyltransferase activity, GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0009958 - positive gravitropism, GO:0016758 - transferase activity, transferring hexosyl groups, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0010601 - positive regulation of auxin biosynthetic process, GO:0010252 - auxin homeostasis, GO:0043231 - intracellular membrane-bounded organelle","TO:0000227 - root length, TO:0000346 - tiller number, TO:0002672 - auxin content, TO:0000163 - auxin sensitivity, TO:0000206 - leaf angle, TO:0000040 - panicle length, TO:0000207 - plant height","PO:0025034 - leaf ","Os03g0693600 ","LOC_Os03g48740.1",{"$nulls":24},"GRF7","OsGRF7","GROWTH-REGULATING FACTOR 7","growth-regulating factor7",12," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0009683 - indoleacetic acid metabolic process, GO:0009739 - response to gibberellin stimulus, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0050832 - defense response to fungus, GO:0016563 - transcription activator activity, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009685 - gibberellin metabolic process, GO:0009845 - seed germination","TO:0000357 - growth and development trait, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000206 - leaf angle, TO:0002672 - auxin content, TO:0000207 - plant height, TO:0000476 - growth hormone content, TO:0002675 - gibberellic acid content, TO:0000396 - grain yield, TO:0000329 - tillering ability, TO:0000346 - tiller number, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease","PO:0009049 - inflorescence , PO:0004709 - axillary bud , PO:0009009 - plant embryo , PO:0005004 - shoot node , PO:0020142 - stem internode , PO:0007057 - 0 seed germination stage ","Os12g0484900","LOC_Os12g29980.2, LOC_Os12g29980.1",{"$nulls":6},"WRKY14","OsWRKY14","WRKY GENE 14","Rice WRKY gene14",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0050832 - defense response to fungus, GO:0010150 - leaf senescence, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os01g0730700","LOC_Os01g53040.1",null,"Os12g0507200","Os01g0723200",-1.2907261,0]
[{"$nulls":25},"Os02g0796500","Os02g0796500",-1.1013699,0,null,"Os03g0356300",2.9869242,"Os03g0358100",-1.0668083,{"$nulls":29},"MIR156D","miR156d, OsmiR156d, osmiR156d, osa-miR156d, osa-MIR156d","MICRORNA156D","micro RNA 156d, microRNA156d, osa-miRNA156d",2," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA","TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000074 - blast disease, TO:0000456 - spikelet number, TO:0006032 - panicle size","PO:0009006 - shoot system ",{"$nulls":26},"PM27","OsPM27","_","seed maturation protein PM27",11," Seed - Physiological traits","GO:0016021 - integral to membrane","TO:0000345 - seed viability",null,"Os11g0673100","LOC_Os11g44940.1, LOC_Os11g44940.2",{"$nulls":6},"WRKY15","OsWRKY15","WRKY GENE 15","Rice WRKY gene15",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0009408 - response to heat, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance",null,"Os01g0656400","LOC_Os01g46800.1",null,"Os01g0559600","Os01g0965500",-1.2913665,0]
[{"$nulls":25},"Os03g0741100","Os03g0741100",-1.6245098,0,null,"Os01g0698900",2.9857807,"Os06g0731750",-1.0667967,{"$nulls":29},"MIR156F","miR156f, osmiR156f, OsmiR156f, osa-miR156f, osa-MIR156fosa-miR156f-3p osa-miR156f-5p","MICRORNA156F","micro RNA 156f, microRNA156f, osa-miRNA156f",8," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0050832 - defense response to fungus, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage","TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000074 - blast disease",{"$nulls":27},"FGR1","OsFGR1, OsNPPR1, NPPR1","FLOURY AND GROWTH RETARDATION 1","floury and growth retardation1, nuclear-localized PPR protein 1",8," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0008380 - RNA splicing, GO:0005634 - nucleus","TO:0000696 - starch content, TO:0000602 - total fat content, TO:0000653 - seed development trait, TO:0000196 - amylose content, TO:0000104 - floury endosperm","PO:0009089 - endosperm , PO:0025034 - leaf , PO:0001170 - seed development stage , PO:0007633 - endosperm development stage ","Os08g0290000","LOC_Os08g19310.1",{"$nulls":6},"WRKY16","OsWRKY16","WRKY GENE16","Rice WRKY gene16",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0006952 - defense response","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance",null,"Os01g0665500/Os01g0665750","LOC_Os01g47560.1",null,"Os11g0586400","Os12g0641400",-1.2934047,0]
[{"$nulls":25},"Os02g0116600","Os02g0116600",1.0241575,0,null,"Os05g0397300",2.985276,"Os03g0728800",-1.0667939,{"$nulls":29},"MIR166B","miR166b, osa-miR166bosa-miR166b-3p osa-miR166b-5p, OsmiR166b","MICRORNA166B","MICRORNA166b, osa-miRNA166b, OsmiRNA166b",6," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Other","GO:0042546 - cell wall biogenesis, GO:0050832 - defense response to fungus, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex","TO:0000074 - blast disease, TO:0000051 - stem strength",{"$nulls":27},"MTA2","OsMTA2","MRNA ADENOSINE METHYLASE 2","mRNA adenosine methylase 2",2," Biochemical character,  Seed - Morphological traits - Embryo,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0009793 - embryonic development ending in seed dormancy, GO:0001510 - RNA methylation, GO:0045995 - regulation of embryonic development, GO:0005634 - nucleus, GO:0016607 - nuclear speck, GO:0080009 - mRNA methylation, GO:0009507 - chloroplast, GO:0008168 - methyltransferase activity, GO:0003723 - RNA binding, GO:0009555 - pollen development","TO:0000040 - panicle length, TO:0000357 - growth and development trait, TO:0000620 - embryo development trait, TO:0000392 - sterility or fertility trait, TO:0000180 - spikelet fertility","PO:0001007 - pollen development stage , PO:0007631 - plant embryo stage ","Os02g0672600","LOC_Os02g45110.1",{"$nulls":6},"WRKY17","OsWRKY17","RICE WRKY GENE17","Rice WRKY gene17",1," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os01g0972800","LOC_Os01g74140.1",null,"Os10g0523700","Os09g0415800",-1.2964925,0]
[{"$nulls":25},"Os04g0489600","Os04g0489600",2.4846888,0,null,"Os06g0662150",2.984742,"Os01g0892800",-1.0663403,{"$nulls":29},"MIR398A","miR398a, osa-miR398a, osa-MIR398a","MICRORNA398A","MICRORNA398a, osa-miRNA398a",10," Vegetative organ - Culm,  Seed - Morphological traits,  Character as QTL - Yield and productivity,  Other","GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex","TO:0000149 - seed width, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000592 - 1000-dehulled grain weight",{"$nulls":27},"FLO10","OsFLO10","FLOURY ENDOSPERM 10","floury endosperm10",3," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances","GO:0009960 - endosperm development, GO:0004526 - ribonuclease P activity, GO:0005739 - mitochondrion, GO:0000366 - intergenic nuclear mRNA trans splicing, GO:0001682 - tRNA 5'-leader removal, GO:0010230 - alternative respiration, GO:0006754 - ATP biosynthetic process","TO:0002655 - starch grain size, TO:0000104 - floury endosperm","PO:0007633 - endosperm development stage ","Os03g0168400","LOC_Os03g07220.1",{"$nulls":6},"WRKY18","OsWRKY18","RICE WRKY GENE18","Rice WRKY gene18",10," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,null,"LOC_Os10g18099",null,"Os05g0155100","Os04g0206700",-1.2966986,0]
[{"$nulls":25},"Os01g0865600","Os01g0865600",-1.0043622,0,null,"Os01g0957800",2.983922,"Os01g0148500",-1.0660323,{"$nulls":29},"MIR1871","miR1871, osa-miR1871, osa-MIR1871","MICRORNA1871","MICRORNA1871, osa-miRNA1871",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0002679 - respiratory burst during defense response, GO:0009414 - response to water deprivation, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000371 - yield trait, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0000455 - seed set percent, TO:0002759 - grain number, TO:0000590 - grain weight, TO:0000152 - panicle number, TO:0000605 - hydrogen peroxide content","PO:0009049 - inflorescence , PO:0020142 - stem internode , PO:0025034 - leaf ",{"$nulls":26},"GASR9","OsGASR9","GIBBERELLIC ACID-STIMULATED RICE 9","gibberellic acid-stimulated rice 9",7," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009939 - positive regulation of gibberellic acid mediated signaling, GO:0005886 - plasma membrane, GO:0005737 - cytoplasm, GO:0009739 - response to gibberellin stimulus","TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity",null,"Os07g0592000","LOC_Os07g40240.1",{"$nulls":6},"WRKY19","OsWRKY19","WRKY GENE 19","Rice WRKY gene19",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009790 - embryonic development, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0050832 - defense response to fungus","TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os05g0571200","LOC_Os05g49620.1",null,"Os11g0621300","Os03g0151800",-1.298541,0]
[{"$nulls":25},"Os07g0628500","Os07g0628500",2.5202627,0,null,"Os03g0179700",2.9834518,"Os03g0650850",-1.0659784,{"$nulls":29},"MIR156J","miR156j, OsmiR156j, osmiR156j, osa-miR156j, osa-MIR156josa-miR156j-3p osa-miR156j-5p","MICRORNA156J","micro RNA 156j, microRNA156j, osa-miRNA156j",6," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA","TO:0000329 - tillering ability, TO:0000074 - blast disease","PO:0009006 - shoot system ",{"$nulls":26},"GBP","OsGBP","GBSS-BINDING PROTEIN",null,2," Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0019252 - starch biosynthetic process, GO:0009536 - plastid","TO:0000696 - starch content, TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000590 - grain weight, TO:0000196 - amylose content, TO:0000266 - chalky endosperm, TO:0000449 - grain yield per plant, TO:0000207 - plant height, TO:0000097 - amylopectin content","PO:0025034 - leaf , PO:0009010 - seed ","Os02g0135900","LOC_Os02g04330.1, LOC_Os02g04330.2",{"$nulls":6},"WRKY2","OsWRKY2","RICE WRKY GENE2","Rice WRKY gene2",10," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000249 - leaf senescence, TO:0000259 - heat tolerance","PO:0001054 - 4 leaf senescence stage ","Os10g0579400","LOC_Os10g42850.1",null,"Os03g0839900","Os11g0151300",-1.3059813,0]
[{"$nulls":25},"Os10g0376900","Os10g0376900",1.7287909,0,null,"Os01g0185500",2.9827776,"Os04g0485000",-1.0655257,{"$nulls":29},"TID1","OsTID1, TubA2, SRS5, OS-TubA2, OsTubA2, OsSRS5","TWISTED DWARF 1","TWISTED DWARF1, Tubulin alpha-2, Tubulin alpha-2 chain, small and round seed 5",11," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003924 - GTPase activity, GO:0009635 - response to herbicide, GO:0046688 - response to copper ion, GO:0007017 - microtubule-based process, GO:0005874 - microtubule, GO:0005737 - cytoplasm, GO:0051510 - regulation of unidimensional cell growth, GO:0005525 - GTP binding, GO:0005200 - structural constituent of cytoskeleton, GO:0051258 - protein polymerization","TO:0000021 - copper sensitivity, TO:0000058 - herbicide sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000391 - seed size",null,"Os11g0247300","LOC_Os11g14220.1",{"$nulls":24},"IQD14","OsIQD14","IQ67-DOMAIN14","IQ67-DOMAIN 14, IQD family protein 14",8," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0048316 - seed development, GO:0070507 - regulation of microtubule cytoskeleton organization, GO:0005874 - microtubule, GO:0051592 - response to calcium ion, GO:0009733 - response to auxin stimulus, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000163 - auxin sensitivity, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000397 - grain size, TO:0002730 - grain shape","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0009066 - anther , PO:0006000 - caryopsis hull , PO:0009051 - spikelet ","Os08g0115200","LOC_Os08g02250.1",{"$nulls":6},"WRKY20","OsWRKY20","RICE WRKY GENE20","Rice WRKY gene20",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009651 - response to salt stress, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0006952 - defense response","TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os01g0820900","LOC_Os01g60540.1",null,"Os08g0101500","Os06g0319700",-1.3073541,0]
[{"$nulls":25},"Os03g0232000","Os03g0232000",-2.5640547,0,null,"Os04g0380200",2.9818695,"Os01g0871200",-1.065425,{"$nulls":29},"_","SSD1","_","sword shape dwarf1",3," Vegetative organ - Culm",{"$nulls":3},"Os03g0302900","LOC_Os03g19080.1, LOC_Os03g19080.2, LOC_Os03g19080.3",{"$nulls":24},"SLC2","OsSLC2, OsACO, ACO","SLENDER AND CRINKLY LEAF 2",null,9," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed,  Seed - Physiological traits - Dormancy,  Character as QTL - Germination","GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0051213 - dioxygenase activity, GO:0009697 - salicylic acid biosynthetic process, GO:0048364 - root development, GO:0048366 - leaf development, GO:0048316 - seed development, GO:0009845 - seed germination","TO:0000370 - leaf width, TO:0000241 - leaf number, TO:0000227 - root length, TO:0000207 - plant height, TO:0000655 - leaf development trait","PO:0025527 - shoot system development stage , PO:0007045 - coleoptile emergence stage , PO:0001170 - seed development stage , PO:0001031 - 4 root elongation stage , PO:0007057 - 0 seed germination stage ","Os09g0570800 ","LOC_Os09g39720.1",{"$nulls":6},"WRKY21","OsWRKY21","RICE WRKY GENE21","Rice WRKY gene21",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os01g0821600","LOC_Os01g60640.1",null,"Os02g0817700","Os07g0229900",-1.3121268,0]
[{"$nulls":25},"Os02g0120500","Os02g0120500",-3.2845008,0,null,"Os05g0199100",2.9812462,"Os02g0722800",-1.0648848,{"$nulls":29},"PIL16","APG, OsPIL16, OsbHLH106","_","ANTAGONIST OF PGL1, PHYTOCHROME INTERACTING FACTOR-LIKE 16, basic helix-loop-helix protein 106",5," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009959 - negative gravitropism, GO:0032956 - regulation of actin cytoskeleton organization, GO:0009416 - response to light stimulus, GO:0032922 - circadian regulation of gene expression","TO:0000734 - grain length, TO:0000075 - light sensitivity, TO:0002756 - shoot habit",null,"Os05g0139100","LOC_Os05g04740.2, LOC_Os05g04740.1",{"$nulls":24},"SE14","JMJ701, Os JMJ701, Se14","PHOTOSENSITIVITY 14","Jumonji 701, Photoperiod-sensitivity-14",3," Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0045814 - negative regulation of gene expression, epigenetic, GO:0009908 - flower development, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0035097 - histone methyltransferase complex, GO:0051213 - dioxygenase activity, GO:0032452 - histone demethylase activity, GO:0034647 - histone demethylase activity (H3-trimethyl-K4 specific), GO:0046872 - metal ion binding, GO:0003676 - nucleic acid binding, GO:0006338 - chromatin remodeling, GO:0005634 - nucleus, GO:0010114 - response to red light","TO:0000158 - red light sensitivity, TO:0000397 - grain size, TO:0000137 - days to heading","PO:0020103 - flag leaf , PO:0009047 - stem ","Os03g0151300","LOC_Os03g05690.1, LOC_Os03g05680.1",{"$nulls":6},"WRKY22","OsWRKY22","WRKY GENE 22","Rice WRKY gene22",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009863 - salicylic acid mediated signaling pathway, GO:0009408 - response to heat, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus","TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance",null,"Os01g0820400","LOC_Os01g60490.1",null,"Os09g0544000","Os01g0220300",-1.3131346,0]
[{"$nulls":25},"Os10g0556200","Os10g0556200",1.1279386,0,null,"Os01g0580500",2.9776776,"Os11g0433500",-1.0646049,{"$nulls":29},"EIF3H","eIF-3h, OseIF3h","EUKARYOTIC INITIATION FACTOR 3H","\\eukaryotic translation initiation factor 3, subunit h\\\", Eukaryotic translation initiation factor 3 subunit h\"",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility","GO:0005783 - endoplasmic reticulum, GO:0044237 - cellular metabolic process, GO:0009555 - pollen development, GO:0006091 - generation of precursor metabolites and energy, GO:0006446 - regulation of translational initiation, GO:0001731 - formation of translation preinitiation complex, GO:0005852 - eukaryotic translation initiation factor 3 complex, GO:0003743 - translation initiation factor activity, GO:0015979 - photosynthesis, GO:0016282 - eukaryotic 43S preinitiation complex, GO:0033290 - eukaryotic 48S preinitiation complex","TO:0000421 - pollen fertility, TO:0000357 - growth and development trait, TO:0000207 - plant height, TO:0000455 - seed set percent","PO:0009038 - palea , PO:0009037 - lemma , PO:0009047 - stem , PO:0025034 - leaf , PO:0009030 - carpel , PO:0001007 - pollen development stage ","Os04g0376500","LOC_Os04g30780.1, LOC_Os04g30780.2",{"$nulls":24},"_","OsGAP, GAP","_","GTPase activating protein",7," Seed - Physiological traits - Dormancy","GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0009845 - seed germination","TO:0000615 - abscisic acid sensitivity",null,"Os07g0500300","LOC_Os07g31720.1",{"$nulls":6},"WRKY23","OsWRKY23","WRKY GENE 23","Rice WRKY gene23",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009863 - salicylic acid mediated signaling pathway, GO:0009408 - response to heat, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0009751 - response to salicylic acid stimulus","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os01g0734000","LOC_Os01g53260.1",null,"Os03g0798200","Os06g0683400",-1.3142589,0]
[{"$nulls":25},"Os03g0293400","Os03g0293400",-1.2707386,0,null,"Os10g0483400",2.9754088,"Os07g0170300",-1.0645069,{"$nulls":29},"PPR920","OsPPR920, OsPPR939, PPR939","PENTATRICOPEPTIDE REPEAT PROTEIN 920","pentatricopeptide repeat protein 920",5," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility","GO:0008380 - RNA splicing, GO:0000963 - mitochondrial RNA processing, GO:0009555 - pollen development, GO:0005739 - mitochondrion","TO:0000357 - growth and development trait, TO:0000421 - pollen fertility, TO:0000207 - plant height, TO:0000053 - pollen sterility","PO:0001007 - pollen development stage ","Os05g0275100","LOC_Os05g19390.1",{"$nulls":24},"_",null,"_",null,9," Biochemical character,  Coloration,  Seed - Morphological traits","GO:0009962 - regulation of flavonoid biosynthetic process, GO:0016787 - hydrolase activity, GO:0009056 - catabolic process","TO:0000290 - flavonoid content",null,"Os09g0455500","LOC_Os09g28230.1",{"$nulls":6},"WRKY24","OsWRKY24","WRKY GENE 24","Rice WRKY gene24",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009611 - response to wounding, GO:0003700 - transcription factor activity, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect, GO:0080027 - response to herbivore, GO:0006952 - defense response, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000424 - brown planthopper resistance, TO:0000454 - stem borer resistance, TO:0000615 - abscisic acid sensitivity, TO:0000432 - temperature response trait, TO:0000074 - blast disease","PO:0020039 - leaf lamina ","Os01g0826400","LOC_Os01g61080.1",null,"Os02g0745100","Os07g0174200",-1.3189319,0]
[{"$nulls":25},"Os01g0159800","Os01g0159800",-1.8455215,0,null,"Os05g0551100",2.9747448,"Os03g0201200",-1.0643353,{"$nulls":29},"_","OsSIN","_","SHORT INTERNODES",3," Vegetative organ - Culm",{"$nulls":29},"FAH2","OsFAH2","FATTY ACID HYDROXYLASE 2","fatty acid hydroxylase 2",3," Biochemical character,  Seed - Physiological traits,  Tolerance and resistance - Stress tolerance","GO:0005789 - endoplasmic reticulum membrane, GO:0016126 - sterol biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0016209 - antioxidant activity, GO:0050995 - negative regulation of lipid catabolic process, GO:0005506 - iron ion binding, GO:0000254 - C-4 methylsterol oxidase activity, GO:0016021 - integral to membrane, GO:0016020 - membrane","TO:0002657 - oxidative stress, TO:0000345 - seed viability",null,"Os03g0108500","LOC_Os03g01820.1",{"$nulls":6},"WRKY25","OsWRKY25, OsWRKY44, WRKY44","WRKY GENE 25","WRKY GENE 44.",8," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os08g0235800","LOC_Os08g13840.1, LOC_Os08g13840.2",null,"Os07g0249700","Os07g0163000",-1.3198757,0]
[{"$nulls":25},"Os02g0805250","Os02g0805250",3.5810926,0,null,"Os02g0128200",2.9702263,"Os03g0297700",-1.0641394,{"$nulls":29},"SPDS2","OsSPDS2, OsSPMS1, SPMS1","SPERMIDINE SYNTHASE 2","spermidine synthase 2, spermine synthase 1, spermidine/spermine synthase 1",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0016740 - transferase activity, GO:0048831 - regulation of shoot development, GO:0009692 - ethylene metabolic process, GO:0048364 - root development, GO:0006596 - polyamine biosynthetic process, GO:0004766 - spermidine synthase activity, GO:0010187 - negative regulation of seed germination, GO:0016049 - cell growth, GO:0009873 - ethylene mediated signaling pathway, GO:0008152 - metabolic process, GO:0009693 - ethylene biosynthetic process, GO:0009651 - response to salt stress","TO:0000449 - grain yield per plant, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000339 - stem thickness, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000430 - germination rate, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009047 - stem , PO:0020141 - stem node , PO:0000025 - root tip ","Os06g0528600","LOC_Os06g33710.1, LOC_Os06g33710.2, LOC_Os06g33710.3, LOC_Os06g33710.4",{"$nulls":24},"HYPRP45","OsHyPRP45, HyPRP45","HYBRID PROLINE-RICH PROTEIN 45","Hybrid Proline-Rich Protein 45",12," Seed - Physiological traits - Storage substances",null,"TO:0000196 - amylose content","PO:0020032 - plumule ","Os12g0473900","LOC_Os12g28880.1",{"$nulls":6},"WRKY26","OsWRKY26, OsWRKY59, DLN19, OsDLN19","WRKY GENE 26","Rice WRKY gene 26, Rice WRKY gene 59, DLN repressor 19, DLN motif protein 19",1," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0007568 - aging, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0050832 - defense response to fungus","TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease","PO:0001054 - 4 leaf senescence stage ","Os01g0714800","LOC_Os01g51690.1",null,"Os11g0642800","Os11g0695000",-1.3209418,0]
[{"$nulls":25},"Os01g0707500","Os01g0707500",2.0354517,0,null,"Os03g0302900",2.9698544,"Os09g0549700",-1.0638255,{"$nulls":29},"FUCTA","OsFUT11, FUT11, FucTA, OsFucTA, OsFucT, FucT, \\alpha1, 3-FucT\\\"\"","CORE ALPHA-1,3-FUCOSYLTRANSFERASE","core alpha-1, 3-fucosyltransferase, alpha1, 3-Fucosyltransferase, Glycoprotein 3-alpha-L-fucosyltransferase A",8," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0018392 - glycoprotein 3-alpha-L-fucosyltransferase activity, GO:0008417 - fucosyltransferase activity, GO:0006486 - protein amino acid glycosylation, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009908 - flower development, GO:0032580 - Golgi cisterna membrane, GO:0009555 - pollen development, GO:0048653 - anther development","TO:0000576 - stem length, TO:0000391 - seed size, TO:0000214 - anther shape, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000531 - anther length, TO:0000207 - plant height, TO:0002610 - pistil length, TO:0000145 - internode length, TO:0000622 - flower development trait, TO:0000429 - salt sensitivity, TO:0000448 - filled grain percentage","PO:0001004 - anther development stage , PO:0001007 - pollen development stage , PO:0007615 - flower development stage ","Os08g0472600","LOC_Os08g36840.1",{"$nulls":24},"REY(K2)","OsPFKB1, PFKB1","REVERTIBLE EARLY YELLOWING KITAAKE 2","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0008443 - phosphofructokinase activity, GO:0009507 - chloroplast, GO:0015979 - photosynthesis, GO:0016773 - phosphotransferase activity, alcohol group as acceptor, GO:0019200 - carbohydrate kinase activity","TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000455 - seed set percent, TO:0000152 - panicle number, TO:0000293 - chlorophyll-a content, TO:0002715 - chloroplast development trait, TO:0000326 - leaf color",null,"Os10g0573000","LOC_Os10g42240.2, LOC_Os10g42240.1",{"$nulls":6},"WRKY27","OsWRKY27","RICE WRKY GENE27","Rice WRKY gene27",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0010188 - response to microbial phytotoxin, GO:0009635 - response to herbicide, GO:0003700 - transcription factor activity","TO:0000058 - herbicide sensitivity, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os01g0586800","LOC_Os01g40430.1",null,"Os03g0689300","Os11g0104900",-1.3233389,0]
[{"$nulls":25},"Os02g0759000","Os02g0759000",2.0608401,0,null,"Os08g0467300",2.9643316,"Os03g0241400",-1.0635424,{"$nulls":29},"GGT","OsGGT, OsPGSIP-C1, PGSIP-C1","GLYCOGENIN GLUCOSYLTRANSFERASE","glycogenin glucosyltransferase, plant glycogenin-like starch initiation protein C1",10," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016757 - transferase activity, transferring glycosyl groups","TO:0000657 - spikelet anatomy and morphology trait, TO:0000207 - plant height",null,"Os10g0555100","LOC_Os10g40640.1",{"$nulls":24},"FLO14","OsFLO14, OsNPPR3, NPPR3","FLOURY ENDOSPERM 14","floury endosperm14, Nucleolus-Localized Pentatricopeptide Repeat Protein 3",3," Seed - Physiological traits - Storage substances","GO:0009960 - endosperm development, GO:0005730 - nucleolus, GO:0019252 - starch biosynthetic process","TO:0000696 - starch content, TO:0000345 - seed viability, TO:0000196 - amylose content, TO:0000104 - floury endosperm","PO:0007633 - endosperm development stage ","Os03g0728200","LOC_Os03g51840.1",{"$nulls":6},"WRKY28","OsWRKY28, DLN170, OsDLN170","WRKY GENE 28","Rice WRKY gene28, DLN repressor 170, DLN motif protein 170",6," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding","TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os06g0649000","LOC_Os06g44010.1",null,"Os02g0570400","Os03g0710800",-1.3234941,0]
[{"$nulls":25},"Os03g0188400","Os03g0188400",5.307608,0,null,"Os06g0328800",2.959441,"Os12g0154600",-1.0611993,{"$nulls":29},"_","OsSNAP32, SNAP32","_","Synaptosomal-associated protein 32, Synaptosome-associated protein of 32 kD",2," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000180 - spikelet fertility, TO:0000269 - 100-seed weight, TO:0000040 - panicle length, TO:0000207 - plant height","PO:0025034 - leaf ","Os02g0437200","LOC_Os02g24080.5, LOC_Os02g24080.4, LOC_Os02g24080.3, LOC_Os02g24080.2, LOC_Os02g24080.1",{"$nulls":24},"GPA5","OsGPA5","GLUTELIN PRECURSOR ACCUMULATION 5","glutelin precursor accumulation5",6," Seed - Physiological traits - Storage substances","GO:0016020 - membrane, GO:0048316 - seed development, GO:0035091 - phosphoinositide binding, GO:0006892 - post-Golgi vesicle-mediated transport, GO:0015031 - protein transport","TO:0002653 - endosperm storage protein content, TO:0000104 - floury endosperm, TO:0000487 - endosperm color","PO:0001170 - seed development stage , PO:0009089 - endosperm ","Os06g0643000","LOC_Os06g43560.1",{"$nulls":6},"WRKY29","OsWRKY29","WRKY GENE 29","Rice WRKY gene29",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0007568 - aging, GO:0009751 - response to salicylic acid stimulus, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000188 - drought sensitivity","PO:0001054 - 4 leaf senescence stage ","Os07g0111400","LOC_Os07g02060.1",null,"Os03g0741100","Os10g0545700",-1.3270326,0]
[{"$nulls":25},"Os06g0164400","Os06g0164400",1.0836405,0,null,"Os01g0825000",2.958329,"Os01g0106600",-1.0610648,{"$nulls":29},"D14L","OsD14L","DWARF14-LIKE","Os hydrolase, hebibaD14L, Dwarf14-Like",3," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009646 - response to absence of light, GO:0009603 - detection of symbiotic fungus, GO:0016787 - hydrolase activity, GO:0009610 - response to symbiotic fungus","TO:0000620 - embryo development trait, TO:0006036 - stem elongation, TO:0000544 - mesocotyl length, TO:0000460 - light intensity sensitivity",null,"Os03g0437600","LOC_Os03g32270.1",{"$nulls":24},"RBG1","OsRBG1","RICE BIG GRAIN 1","Rice Big Grain 1",11," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0009408 - response to heat, GO:0009733 - response to auxin stimulus, GO:0048364 - root development, GO:0009628 - response to abiotic stimulus, GO:0080050 - regulation of seed development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress","TO:0000276 - drought tolerance, TO:0000168 - abiotic stress trait, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000163 - auxin sensitivity, TO:0002672 - auxin content, TO:0000656 - root development trait, TO:0000040 - panicle length, TO:0000576 - stem length, TO:0000227 - root length, TO:0000592 - 1000-dehulled grain weight, TO:0000146 - seed length, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000145 - internode length, TO:0000128 - harvest index","PO:0001170 - seed development stage , PO:0007518 - crown root emergence stage , PO:0007520 - root development stage , PO:0004010 - meristematic cell ","Os11g0497350","LOC_Os11g30430.1",{"$nulls":6},"WRKY3","OsWRKY3","WRKY GENE3","Rice WRKY gene3",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000188 - drought sensitivity",null,"Os03g0758000","LOC_Os03g55080.1",null,"Os10g0329300","Os01g0718000",-1.3273708,0]
[{"$nulls":25},"Os03g0639300","Os03g0639300",-1.6878551,0,null,"Os02g0269200",2.957077,"Os05g0208050",-1.0605308,{"$nulls":29},"CTR2","OsCTR2","CONSTITUTIVE TRIPLE-RESPONSE 2","CONSTITUTIVE TRIPLE-RESPONSE2",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity","GO:0048573 - photoperiodism, flowering, GO:0009873 - ethylene mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000173 - ethylene sensitivity, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os02g0527600 ","LOC_Os02g32610.2, LOC_Os02g32610.3, LOC_Os02g32610.4",{"$nulls":24},"RBG1-L","OsRBG1-L","RBG1-LIKE","RBG1-like",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000397 - grain size, TO:0000146 - seed length, TO:0000590 - grain weight",null,"Os01g0922100","LOC_Os01g69290.1",{"$nulls":6},"WRKY30","OsWRKY30","WRKY GENE 30","Rice WRKY gene30",8," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0002213 - defense response to insect, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0080027 - response to herbivore, GO:0042742 - defense response to bacterium","TO:0006001 - salt tolerance, TO:0000454 - stem borer resistance, TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os08g0499300","LOC_Os08g38990.1, LOC_Os08g38990.2, LOC_Os08g38990.3, LOC_Os08g38990.4",null,"Os03g0337800","Os02g0819100",-1.3327707,0]
[{"$nulls":25},"Os01g0218100","Os01g0218100",-2.9641974,0,null,"Os04g0225700",2.956993,"Os01g0695800",-1.0602475,{"$nulls":29},"TIFY11E","OsJAZ 13, OsJAZ13, JAZ13, OsTIFY11e, OsJAZ13a, OsJAZ13b, OsJAZ13c, OsJAZ13d","TIFY GENE 11E","Jasmonate ZIM-domain protein 13",10," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0040008 - regulation of growth, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0042594 - response to starvation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0034052 - positive regulation of plant-type hypersensitive response, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009723 - response to ethylene stimulus, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009873 - ethylene mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002736 - flower number, TO:0000576 - stem length, TO:0000172 - jasmonic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000173 - ethylene sensitivity",null,"Os10g0391400","LOC_Os10g25230.1",{"$nulls":24},"RL1","OsRL1, OsEMP8, EMP8","RADICLELESS 1 ","radicleless 1",8," Seed - Morphological traits - Embryo,  Seed - Morphological traits - Endosperm","GO:0009790 - embryonic development, GO:0009960 - endosperm development, GO:0005739 - mitochondrion, GO:0000372 - Group I intron splicing","TO:0000620 - embryo development trait","PO:0007631 - plant embryo stage , PO:0007633 - endosperm development stage ","Os08g0525500","LOC_Os08g41380.1",{"$nulls":6},"WRKY31","OsWRKY31","WRKY GENE 31","Rice WRKY gene31",6," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os06g0504900","LOC_Os06g30860.1",null,"Os07g0645400","Os02g0314300",-1.3376585,0]
[{"$nulls":25},"Os04g0493000","Os04g0493000",-1.6899577,0,null,"Os01g0795300",2.9564037,"Os07g0684000",-1.058981,{"$nulls":29},"CCR20","OS-CCR, OsCCR, CCR, OsCCR20, OsCCR14, CCR14","CINNAMOYL-COA REDUCTASE 20","cinnamoyl-CoA reductase, cinnamoyl CoA reductase 20",8," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009411 - response to UV, GO:0009807 - lignan biosynthetic process, GO:0050662 - coenzyme binding, GO:0009834 - secondary cell wall biogenesis, GO:0009809 - lignin biosynthetic process, GO:0044237 - cellular metabolic process, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0003824 - catalytic activity","TO:0000011 - nitrogen sensitivity, TO:0000733 - lignin biosynthesis trait, TO:0000731 - lignin content, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000160 - UV light sensitivity, TO:0000051 - stem strength",null,"Os08g0441500 ","LOC_Os08g34280.1",{"$nulls":24},"PSKR3","OsPSKR3, OsPSKR15, PSKR15","PHYTOSULFOKINE RECEPTOR 3 ","phytosulfokine receptor 3, Phytosulfokine Receptor 15",7," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0001653 - peptide receptor activity, GO:0004674 - protein serine/threonine kinase activity, GO:0016021 - integral to membrane, GO:0005524 - ATP binding, GO:0009507 - chloroplast, GO:0005886 - plasma membrane, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold","TO:0000203 - bacterial leaf streak disease resistance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000276 - drought tolerance","PO:0009009 - plant embryo , PO:0009030 - carpel , PO:0001170 - seed development stage ","Os07g0107800 ","LOC_Os07g01710.1",{"$nulls":6},"WRKY32","OsWRKY32","WRKY GENE 32","Rice WRKY gene32",2," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os02g0770500","LOC_Os02g53100.1",null,"Os06g0116600","Os05g0549100",-1.3404231,0]
[{"$nulls":25},"Os03g0351100","Os03g0351100",-1.4800086,0,null,"Os03g0564600",2.9532986,"Os05g0156500",-1.0589027,{"$nulls":29},"DRUS2","YK1, OsCrRLK1L5, CrRLK1L5, OsDRUS2, OsMRLK3, MRLK3","DWARF AND RUNTISH SPIKELET2","Catharanthus roseus receptor-like kinase1-like kinase 5, DWARF AND RUNTISH SPIKELET 2, malectin/malectin-like receptor-like kinase 3",1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0019252 - starch biosynthetic process, GO:0048653 - anther development, GO:0043610 - regulation of carbohydrate utilization, GO:0016020 - membrane, GO:0005886 - plasma membrane, GO:0005618 - cell wall, GO:0005524 - ATP binding","TO:0000564 - spikelet width, TO:0000040 - panicle length, TO:0000187 - anther color, TO:0000531 - anther length, TO:0000180 - spikelet fertility, TO:0000621 - inflorescence development trait, TO:0006036 - stem elongation, TO:0000392 - sterility or fertility trait, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000366 - reproductive growth time, TO:0000547 - primary branch number","PO:0009005 - root , PO:0001004 - anther development stage , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage ","Os01g0769700","LOC_Os01g56330.1",{"$nulls":24},"_","OsSTA135, STA135, OsODD21, ODD21, 2-ODD21, Os2-ODD21, Os2ODD21, M2H, OsM2H","_","2-oxoglutarate-dependent dioxygenase 21, Melatonin 2-Hydroxylase",4," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0007623 - circadian rhythm, GO:0051213 - dioxygenase activity, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0010030 - positive regulation of seed germination, GO:0009648 - photoperiodism, GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0030186 - melatonin metabolic process, GO:0046686 - response to cadmium ion","TO:0000495 - chlorophyll content, TO:0010001 - percent germination, TO:0000654 - shoot development trait, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000467 - cell membrane stability, TO:0000605 - hydrogen peroxide content","PO:0009066 - anther , PO:0001054 - 4 leaf senescence stage ","Os04g0667400","LOC_Os04g57180.1",{"$nulls":6},"WRKY33","OsWRKY33","WRKY GENE 33","Rice WRKY gene33",9," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response",{"$nulls":5},"Os04g0656100","Os03g0200500",-1.3408308,0]
[{"$nulls":25},"Os02g0646200","Os02g0646200",2.3206272,0,null,"Os06g0674600",2.948221,"Os10g0488100",-1.0586424,{"$nulls":29},"_","OsbHLH073, OsbHLH73, bHLH073","_","basic helix-loop-helix protein 073",5," Vegetative organ - Culm","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010371 - regulation of gibberellin biosynthetic process, GO:0010336 - gibberellic acid homeostasis, GO:0080006 - internode patterning","TO:0000207 - plant height, TO:0000145 - internode length","PO:0020142 - stem internode ","Os05g0228400","LOC_Os05g14010.1",{"$nulls":24},"_","OsSec18, Sec18, OsNSF, NSF","_","N-ethylmaleimide-sensitive factor",5," Seed - Morphological traits - Endosperm","GO:0016197 - endosome transport, GO:0042735 - protein body, GO:0005773 - vacuole, GO:0009506 - plasmodesma, GO:0005886 - plasma membrane, GO:0051028 - mRNA transport, GO:0005524 - ATP binding, GO:0005794 - Golgi apparatus, GO:0005737 - cytoplasm, GO:0005768 - endosome","TO:0000207 - plant height, TO:0000589 - seed weight (sensu Poaceae)","PO:0009089 - endosperm ","Os05g0519400","LOC_Os05g44310.1",{"$nulls":6},"WRKY34","OsWRKY34","WRKY GENE 34","Rice WRKY gene34",2," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os02g0652100","LOC_Os02g43560.1",null,"Os02g0140300","Os05g0148700",-1.3425869,0]
[{"$nulls":25},"Os06g0152200","Os06g0152200",1.2810127,0,null,"Os04g0403900",2.9458873,"Os01g0836800",-1.0585915,{"$nulls":29},"_","OsbHLH113, bHLH113","_","basic helix-loop-helix protein 113",10," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0009414 - response to water deprivation","TO:0000207 - plant height, TO:0000276 - drought tolerance",null,"Os10g0556200","LOC_Os10g40740.1",{"$nulls":24},"SSG4","OsSSG4","SUBSTANDARD STARCH GRAIN4","substandard starch grain4, substandard starch grain 4",1," Coloration - Chlorophyll,  Seed - Morphological traits - Endosperm","GO:0009570 - chloroplast stroma, GO:0009501 - amyloplast","TO:0000149 - seed width, TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000266 - chalky endosperm, TO:0002655 - starch grain size",null,"Os01g0179400","LOC_Os01g08420.1",{"$nulls":6},"WRKY35","OsWRKY35","WRKY GENE 35","Rice WRKY gene35",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0009409 - response to cold, GO:0003700 - transcription factor activity","TO:0000303 - cold tolerance",null,"Os04g0471700","LOC_Os04g39570.1, LOC_Os04g39570.2",null,"Os12g0133100","Os08g0559400",-1.3433453,0]
[{"$nulls":25},"Os09g0475800","Os09g0475800",1.0848957,0,null,"Os05g0468100",2.945289,"Os01g0142950",-1.0581174,{"$nulls":29},"ANN3","OsANN3, OsANN4, ANN4","ANNEXIN 3","Annexin 3",5," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Character as QTL - Plant growth activity","GO:0005509 - calcium ion binding, GO:0009738 - abscisic acid mediated signaling, GO:0005544 - calcium-dependent phospholipid binding, GO:0070509 - calcium ion import, GO:0009737 - response to abscisic acid stimulus, GO:0048364 - root development","TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0000656 - root development trait, TO:0000615 - abscisic acid sensitivity, TO:0000227 - root length","PO:0007520 - root development stage ","Os05g0382600","LOC_Os05g31750.1",{"$nulls":24},"SUI2","OsSUI2, ES5, OsES5","SHORTENED UPPERMOST INTERNODE 2","Shortened Uppermost Internode 2, early leaf senescence 5",5," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0019827 - stem cell maintenance, GO:0007568 - aging, GO:0009658 - chloroplast organization, GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity, GO:0005789 - endoplasmic reticulum membrane, GO:0006646 - phosphatidylethanolamine biosynthetic process, GO:0048831 - regulation of shoot development, GO:0080006 - internode patterning, GO:0006659 - phosphatidylserine biosynthetic process, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000346 - tiller number, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000145 - internode length, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0002715 - chloroplast development trait, TO:0001015 - photosynthetic rate","PO:0005005 - shoot internode , PO:0007089 - stem elongation stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os05g0554400","LOC_Os05g48060.1",{"$nulls":6},"WRKY36","OsWRKY36","WRKY GENE 36","Rice WRKY gene36",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance",null,"Os04g0545000","LOC_Os04g46060.1",null,"Os11g0105400","Os01g0350900",-1.3581586,0]
[{"$nulls":25},"Os03g0145200","Os03g0145200",-1.4545937,0,null,"Os08g0108700",2.9431598,"Os06g0343100",-1.0580597,{"$nulls":29},"MOC2","FR, OsFR, FBP1, OsFBP1, OsMOC2, OscFBP1, cFBP1, MOC2/FBP1","MONOCULM 2","cytosolic fructose 1, 6-bisphosphatase, cytosolic FruP2ase, monoculm 2, monoculm2, cytosolic fructose-1, 6-bisphosphatase 1",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009750 - response to fructose stimulus, GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity, GO:0030388 - fructose 1,6-bisphosphate metabolic process, GO:0005986 - sucrose biosynthetic process, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0005829 - cytosol, GO:0005983 - starch catabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding","TO:0000329 - tillering ability, TO:0000515 - relative growth rate, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000326 - leaf color",null,"Os01g0866400","LOC_Os01g64660.1, LOC_Os01g64660.2, LOC_Os01g64660.3, LOC_Os01g64660.4",{"$nulls":24},"SMK1","Os_SMK1","SMALL KERNEL 1","Small kernel 1",11," Seed - Morphological traits - Endosperm,  Seed - Physiological traits","GO:0048316 - seed development, GO:0009790 - embryonic development, GO:0016556 - mRNA modification, GO:0009845 - seed germination","TO:0000266 - chalky endosperm, TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000100 - shrunken endosperm","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage , PO:0020144 - apical meristem ","Os11g0213500","LOC_Os11g10740.1",{"$nulls":6},"WRKY37","OsWRKY37","WRKY GENE 37","Rice WRKY gene37",4," Seed,  Tolerance and resistance - Disease resistance,  Other","GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance",null,"Os04g0597300","LOC_Os04g50920.1",null,"Os06g0477600","Os07g0575700",-1.3676077,0]
[{"$nulls":25},"Os01g0234100","Os01g0234100",-2.3259966,0,null,"Os05g0187100",2.9419963,"Os01g0739700",-1.0579394,{"$nulls":29},"FLO16","CMDH, OscMDH, cMDH, OsMDH, MDH, OsFLO16","FLOURY ENDOSPERM16","cytoplasmic malate dehydrogenase, malate dehydrogenase, NAD-dependent cytosolic malate dehydrogenase",10," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0019252 - starch biosynthetic process, GO:0005634 - nucleus, GO:0005886 - plasma membrane, GO:0006099 - tricarboxylic acid cycle, GO:0005829 - cytosol, GO:0046686 - response to cadmium ion, GO:0044262 - cellular carbohydrate metabolic process, GO:0030060 - L-malate dehydrogenase activity, GO:0005774 - vacuolar membrane, GO:0009960 - endosperm development, GO:0042592 - homeostatic process, GO:0010043 - response to zinc ion, GO:0009651 - response to salt stress, GO:0009506 - plasmodesma, GO:0051775 - response to redox state, GO:0009570 - chloroplast stroma, GO:0048316 - seed development, GO:0048046 - apoplast, GO:0006108 - malate metabolic process","TO:0000100 - shrunken endosperm, TO:0000196 - amylose content, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000602 - total fat content, TO:0000328 - sucrose content, TO:0000399 - grain thickness, TO:0000592 - 1000-dehulled grain weight, TO:0000696 - starch content, TO:0000104 - floury endosperm, TO:0000346 - tiller number","PO:0001170 - seed development stage , PO:0007633 - endosperm development stage , PO:0020104 - leaf sheath ","Os10g0478200","LOC_Os10g33800.3, LOC_Os10g33800.1, LOC_Os10g33800.2",{"$nulls":24},"OSCA1.4","OsOSCA1.4, OsIOSCA1.4, OsDDP8, DDP8, OsDDP8.1, OsDDP8.2","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.4","Hyperosmolality-gated calcium-permeable channel 1.4, DUF221 Domain containing Protein 8, reduced hyperosmolality-induced Ca2+ increase 1.4",10," Biochemical character,  Seed,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0005262 - calcium channel activity, GO:0006874 - cellular calcium ion homeostasis, GO:0009651 - response to salt stress, GO:0009506 - plasmodesma, GO:0005886 - plasma membrane, GO:0005794 - Golgi apparatus, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0043575 - detection of osmotic stimulus","TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0001170 - seed development stage ","Os10g0579100","LOC_Os10g42820.1, LOC_Os10g42820.2",{"$nulls":6},"WRKY38","OsWRKY38","WRKY GENE 38","Rice WRKY gene38",null," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity",{"$nulls":5},"Os03g0737200","Os05g0187800",-1.3682857,0]
[{"$nulls":25},"Os01g0976800","Os01g0976800",-2.0206013,0,null,"Os01g0323100",2.9397247,"Os04g0430100",-1.0569,{"$nulls":29},"_","OsBIHD1, BIHD1","_","BTH-induced homeodomain protein 1, BLH6-like 1, BEL1-LIKE HOMEODOMAIN6-like 1",3," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0010422 - regulation of brassinosteroid biosynthetic process, GO:0009651 - response to salt stress, GO:0006979 - response to oxidative stress, GO:0002229 - defense response to oomycetes, GO:0050832 - defense response to fungus, GO:0009817 - defense response to fungus, incompatible interaction, GO:0009873 - ethylene mediated signaling pathway, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0051607 - defense response to virus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000420 - fertility related trait, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0002677 - brassinosteroid sensitivity, TO:0000043 - root anatomy and morphology trait, TO:0000148 - viral disease resistance, TO:0000112 - disease resistance, TO:0000429 - salt sensitivity, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress",null,"Os03g0680800","LOC_Os03g47740.1, LOC_Os03g47740.2, LOC_Os03g47740.3",{"$nulls":24},"OSCA2.4","OsOSCA2.4, OsIOSCA2.4, OsDDP9, DDP9, OsDDP9.1","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 2.4","Hyperosmolality-gated calcium-permeable channel 2.4, DUF221 Domain containing Protein 9, reduced hyperosmolality-induced Ca2+ increase 2.4",12," Biochemical character,  Seed","GO:0006970 - response to osmotic stress, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0016020 - membrane, GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os12g0582800","LOC_Os12g39320.1",{"$nulls":6},"WRKY39","OsWRKY39","WRKY GENE 39","Rice WRKY gene39",2," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os02g0265200","LOC_Os02g16540.1, LOC_Os02g16540.2",null,"Os03g0820300","Os03g0390200",-1.3730067,0]
[{"$nulls":25},"Os06g0194400","Os06g0194400",-1.092112,0,null,"Os10g0498900",2.9388847,"Os01g0542700",-1.0565652,{"$nulls":29},"MGD2","OsMGD, MGD, OsMGD2","MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2","Monogalactosyldiacylglycerol synthase, MGDG synthase, MGDG synthase 2",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0045017 - glycerolipid biosynthetic process, GO:0046509 - 1,2-diacylglycerol 3-beta-galactosyltransferase activity, GO:0009658 - chloroplast organization, GO:0030246 - carbohydrate binding, GO:0030259 - lipid glycosylation, GO:0042594 - response to starvation, GO:0010044 - response to aluminum ion, GO:0016036 - cellular response to phosphate starvation, GO:0019374 - galactolipid metabolic process, GO:0009507 - chloroplast, GO:0006794 - phosphorus utilization, GO:0030912 - response to deep water, GO:0009908 - flower development, GO:0009739 - response to gibberellin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009651 - response to salt stress, GO:0009535 - chloroplast thylakoid membrane, GO:0048316 - seed development, GO:0006631 - fatty acid metabolic process, GO:0009247 - glycolipid biosynthetic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009416 - response to light stimulus","TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000316 - photosynthetic ability, TO:0000293 - chlorophyll-a content, TO:0000357 - growth and development trait, TO:0000653 - seed development trait, TO:0000622 - flower development trait, TO:0000371 - yield trait, TO:0000286 - submergence sensitivity, TO:0000627 - relative phosphorus utilization efficiency, TO:0000604 - fat and essential oil content, TO:0000102 - phosphorus sensitivity, TO:0000162 - seed quality, TO:0005001 - linoleic acid content, TO:0000592 - 1000-dehulled grain weight, TO:0000447 - filled grain number, TO:0000040 - panicle length","PO:0001170 - seed development stage , PO:0009066 - anther , PO:0009089 - endosperm , PO:0009010 - seed , PO:0025034 - leaf , PO:0007615 - flower development stage ","Os02g0802700","LOC_Os02g55910.2, LOC_Os02g55910.1",{"$nulls":24},"OSCA4.1","OsOSCA4.1, OsIOSCA4.1","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 4.1","Hyperosmolality-gated calcium-permeable channel 4.1",3," Biochemical character,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0005622 - intracellular, GO:0006623 - protein targeting to vacuole, GO:0016020 - membrane, GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0006001 - fructose catabolic process","TO:0000653 - seed development trait, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0001170 - seed development stage , PO:0007022 - seed imbibition stage ","Os03g0137400","LOC_Os03g04450.1",{"$nulls":6},"WRKY4","OsWRKY4, WRKY122, OsWRKY122","WRKY GENE 4","Rice WRKY gene4",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009723 - response to ethylene stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0043565 - sequence-specific DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000276 - drought tolerance, TO:0000173 - ethylene sensitivity",null,"Os03g0758900","LOC_Os03g55164.1",null,"Os12g0168400","Os07g0668900",-1.374946,0]
[{"$nulls":25},"Os03g0650000","Os03g0650000",1.633223,0,null,"Os02g0712700",2.9382846,"Os05g0108950",-1.0562253,{"$nulls":29},"JAC1","OsJAC1","JACALIN-RELATED LECTIN 1","jacalin-related lectin 1, Jacalin 1",12," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0009751 - response to salicylic acid stimulus, GO:0010332 - response to gamma radiation, GO:0009753 - response to jasmonic acid stimulus, GO:0009826 - unidimensional cell growth, GO:0042742 - defense response to bacterium, GO:0010212 - response to ionizing radiation, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0009611 - response to wounding","TO:0000259 - heat tolerance, TO:0000207 - plant height, TO:0001007 - coleoptile length, TO:0000357 - growth and development trait, TO:0000021 - copper sensitivity, TO:0000074 - blast disease, TO:0000112 - disease resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000161 - radiation response trait, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os12g0247700","LOC_Os12g14440.1",{"$nulls":24},"HRD3","OsHrd3, Hrd3","_","a homologue of yeast Hrd3/mammalian SEL1L",3," Seed - Morphological traits - Endosperm,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0030968 - endoplasmic reticulum unfolded protein response, GO:0005789 - endoplasmic reticulum membrane, GO:0042735 - protein body, GO:0000209 - protein polyubiquitination, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os03g0259300","LOC_Os03g15350.1",{"$nulls":6},"WRKY40","OsWRKY40","WRKY GENE 40","Rice WRKY gene40",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance",null,"Os11g0117500","LOC_Os11g02530.1",null,"Os01g0118000","Os03g0183000",-1.3754607,0]
[{"$nulls":25},"Os11g0498400","Os11g0498400",-1.2110487,0,null,"Os03g0162300",2.9350975,"Os01g0654500",-1.0561829,{"$nulls":29},"GLYR1","OsGLYR1, OsGR1, GR1","GLYOXYLATE/SUCCINIC SEMIALDEHYDE REDUCTASE 1 ","gamma hydroxybutyrate dehydrogenase, glyoxylate/succinic semialdehyde reductase 1, glyoxylate reductase 1",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0010037 - response to carbon dioxide, GO:0051287 - NAD or NADH binding, GO:0005829 - cytosol, GO:0003858 - 3-hydroxybutyrate dehydrogenase activity, GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity, GO:0006098 - pentose-phosphate shunt, GO:0006573 - valine metabolic process, GO:0008442 - 3-hydroxyisobutyrate dehydrogenase activity, GO:0050662 - coenzyme binding, GO:0070402 - NADPH binding, GO:0009648 - photoperiodism, GO:0046487 - glyoxylate metabolic process","TO:0000229 - photoperiod sensitivity, TO:0000207 - plant height",null,"Os02g0562700","LOC_Os02g35500.1",{"$nulls":24},"_","pro13a.5","_",null,12," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os12g0269600","LOC_Os12g17010.1",{"$nulls":6},"WRKY41","OsWRKY41","WRKY GENE 41","Rice WRKY gene41",11," Tolerance and resistance - Disease resistance","GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance",null,"Os11g0686400","LOC_Os11g45924.1",null,"Os03g0639300","Os08g0129200",-1.3782328,0]
[{"$nulls":25},"Os09g0560900","Os09g0560900",-0.99678355,0,null,"Os02g0520750",2.929804,"Os10g0370400",-1.0561796,{"$nulls":29},"FBOX33","OsFbox033, OsFbox33, Fbox33, Os_F0114, OsFBK1, FBK1","F-BOX PROTEIN 33","F-box protein 33, F-box Kelch 1",1," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0048437 - floral organ development, GO:0009733 - response to auxin stimulus, GO:0019005 - SCF ubiquitin ligase complex, GO:0048364 - root development, GO:0048653 - anther development, GO:0052386 - cell wall thickening","TO:0000269 - 100-seed weight, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait, TO:0000657 - spikelet anatomy and morphology trait, TO:0000531 - anther length, TO:0000625 - spikelet density, TO:0000564 - spikelet width, TO:0006013 - carpel number, TO:0000225 - stamen number, TO:0006029 - glume number, TO:0000734 - grain length, TO:0000391 - seed size, TO:0000447 - filled grain number, TO:0000227 - root length, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000397 - grain size, TO:0002600 - flower organ size, TO:0006038 - floral organ number, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000371 - yield trait, TO:0000421 - pollen fertility, TO:0000622 - flower development trait, TO:0000357 - growth and development trait, TO:0000276 - drought tolerance","PO:0000040 - adventitious root nodule , PO:0009013 - portion of meristem tissue , PO:0004010 - meristematic cell , PO:0006023 - bundle sheath , PO:0025178 - stem epidermis , PO:0009072 - plant ovary , PO:0025281 - pollen , PO:0009066 - anther , PO:0025545 - anther wall tapetum cell , PO:0009010 - seed , PO:0009046 - flower , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0007615 - flower development stage , PO:0025585 - floral organ formation stage , PO:0007520 - root development stage , PO:0001004 - anther development stage ","Os01g0659900","LOC_Os01g47050.1",{"$nulls":24},"_","pro13b.4","_",null,7," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os07g0220000 ",{"$nulls":7},"WRKY42","OsWRKY42, WRKY-42","WRKY GENE 42","Rice WRKY gene42, WRKY transcription factor 42",2," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus, GO:0009790 - embryonic development, GO:0003700 - transcription factor activity, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0010150 - leaf senescence, GO:0009753 - response to jasmonic acid stimulus","TO:0006001 - salt tolerance, TO:0000188 - drought sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os02g0462800","LOC_Os02g26430.1",null,"Os04g0493000","Os09g0522200",-1.3784245,0]
[{"$nulls":25},"Os01g0839100","Os01g0839100",-2.8807304,0,null,"Os02g0439200",2.9296436,"Os02g0726400",-1.055677,{"$nulls":29},"ROMT9","COMT, OsCOMT, ROMT-9, OsCOMT1, OsCAldOMT1, CAldOMT1, OsOMT","O-METHYLTRANSFERASE 9","Quercetin 3-O-methyltransferase 1, Flavonol 3-O-methyltransferase 1, caffeic acid 3-O-methyltransferase, Flavonol 3-O-methyltransferase 1, caffeic acid O-methyltransferase 1, 5-hydroxyconiferaldehyde O-methyltransferase 1, 5-hydroxyconiferaldehyde OMT1, 5-HCAld OMT1",8," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0009698 - phenylpropanoid metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0008171 - O-methyltransferase activity, GO:0009642 - response to light intensity, GO:0009807 - lignan biosynthetic process, GO:0009809 - lignin biosynthetic process, GO:0046983 - protein dimerization activity, GO:0005737 - cytoplasm, GO:0017096 - acetylserotonin O-methyltransferase activity, GO:0030187 - melatonin biosynthetic process, GO:0030755 - quercetin 3-O-methyltransferase activity","TO:0000460 - light intensity sensitivity, TO:0000731 - lignin content, TO:0000051 - stem strength, TO:0000160 - UV light sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000733 - lignin biosynthesis trait",null,"Os08g0157500","LOC_Os08g06100.1",{"$nulls":24},"_","pro13b.6, Prol-07","_",null,5," Seed - Physiological traits - Storage substances","GO:0005773 - vacuole, GO:0033095 - aleurone grain, GO:0045735 - nutrient reservoir activity, GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0328466 ","LOC_Os05g26400.1, LOC_Os05g26359.1, LOC_Os05g26250.1",{"$nulls":6},"WRKY43","OsWRKY43","WRKY GENE 43","Rice WRKY gene43",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding","TO:0000401 - plant growth hormone sensitivity, TO:0000188 - drought sensitivity, TO:0000259 - heat tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance",null,"Os05g0567200","LOC_Os05g49210.1",null,"Os05g0576800","Os02g0135200",-1.3809603,0]
[{"$nulls":25},"Os12g0233400","Os12g0233400",-0.9862048,0,null,"Os12g0113500",2.9253447,"Os05g0567900",-1.055427,{"$nulls":29},"GH3-8","OsGH3-8, OsMGH3, OsGH3.8, GH3.8, OsGH3-2","GH3-8",null,7," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010279 - indole-3-acetic acid amido synthetase activity, GO:0016874 - ligase activity, GO:0009908 - flower development, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009852 - auxin catabolic process, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0006955 - immune response, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000020 - black streak dwarf virus resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0006001 - salt tolerance, TO:0002672 - auxin content, TO:0000622 - flower development trait, TO:0000172 - jasmonic acid sensitivity","PO:0009066 - anther , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0007615 - flower development stage ","Os07g0592600","LOC_Os07g40290.1",{"$nulls":24},"_","pro13b.7","_",null,5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0328632 ","LOC_Os05g26250.1, LOC_Os05g26359.1, LOC_Os05g26400.1",{"$nulls":6},"WRKY46","OsWRKY46, WRKY91, OsWRKY91","WRKY GENE 46","WRKY GENE 91",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0002213 - defense response to insect, GO:0010039 - response to iron ion, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium","TO:0000160 - UV light sensitivity, TO:0000261 - insect damage resistance, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity",null,"Os11g0116900","LOC_Os11g02480.1, LOC_Os11g02480.2",null,"Os02g0168100","Os03g0109500",-1.3818601,0]
[{"$nulls":25},"Os09g0385700","Os09g0385700",-2.2297585,0,null,"Os11g0183800",2.923879,"Os03g0806400",-1.0552033,{"$nulls":29},"GID1","gid1, OsGID1, Thl, Os GID1","GIBBERELLIN INSENSITIVE DWARF1","GIBBERELLIN-INSENSITIVE DWARF1, Gibberellin receptor GID1, Gibberellin-insensitive dwarf protein 1, Protein GIBBERELLIN INSENSITIVE DWARF1, Thumbelina, GA-insensitive dwarf 1",5," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0014001 - sclerenchyma cell differentiation, GO:0009414 - response to water deprivation, GO:0009740 - gibberellic acid mediated signaling, GO:2000038 - regulation of stomatal complex development, GO:0009739 - response to gibberellin stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0008152 - metabolic process, GO:0016787 - hydrolase activity, GO:0004872 - receptor activity, GO:0010271 - regulation of chlorophyll catabolic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0006109 - regulation of carbohydrate metabolic process, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:2000037 - regulation of stomatal complex patterning","TO:0000566 - stomatal frequency, TO:0000291 - carbohydrate content, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000286 - submergence sensitivity, TO:0000276 - drought tolerance, TO:0000135 - leaf length, TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000470 - vascular tissue related trait",null,"Os05g0407500","LOC_Os05g33730.1",{"$nulls":24},"_","pro13b.13","_",null,5," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity, GO:0042735 - protein body, GO:0005773 - vacuole, GO:0005783 - endoplasmic reticulum, GO:0033095 - aleurone grain",null,"PO:0009089 - endosperm ","Os05g0329350 ",{"$nulls":7},"WRKY47","OsWRKY47","WRKY GENE 47","Rice WRKY gene47",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0007568 - aging, GO:0010150 - leaf senescence, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0003700 - transcription factor activity","TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance","PO:0001054 - 4 leaf senescence stage ","Os07g0680400","LOC_Os07g48260.1",null,"Os07g0637300","Os07g0584100",-1.3869905,0]
[{"$nulls":25},"Os09g0485600","Os09g0485600",1.3620481,0,null,"Os05g0571200",2.9214642,"Os04g0509600",-1.0550585,{"$nulls":29},"NH1","OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2, DLN5, OsDLN5","NPR1 HOMOLOG 1","NPR1-like 1, NPR1 homologue 1, nonexpresser of PR genes 1, Arabidopsis NPR1 homolog 1, non-expressor of pathogenesis-related gene 1, Arabidopsis NPR1 homologue 1, pathogenesis-related gene 2, nonexpressor of PR genes 1, Nonexpressor of Pathogenesis-Related Genes1, NONEXPRESSOR OF PATHOGENESIS-RELATED1 HOMOLOG1, NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1, non-expressor pathogenesis-related 1, DLN repressor 5, DLN motif protein 5",1," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048364 - root development, GO:0010200 - response to chitin, GO:0016563 - transcription activator activity, GO:0009814 - defense response, incompatible interaction, GO:0002213 - defense response to insect, GO:0006952 - defense response, GO:0002237 - response to molecule of bacterial origin, GO:0009625 - response to insect, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0031348 - negative regulation of defense response, GO:0010112 - regulation of systemic acquired resistance, GO:0008219 - cell death, GO:0009408 - response to heat, GO:0009611 - response to wounding, GO:0006950 - response to stress, GO:0010942 - positive regulation of cell death, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009682 - induced systemic resistance, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009627 - systemic acquired resistance, GO:0050832 - defense response to fungus, GO:0009734 - auxin mediated signaling pathway","TO:0000401 - plant growth hormone sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity, TO:0000181 - seed weight, TO:0000445 - seed number, TO:0000656 - root development trait, TO:0000163 - auxin sensitivity, TO:0000346 - tiller number, TO:0000615 - abscisic acid sensitivity, TO:0000424 - brown planthopper resistance, TO:0000074 - blast disease, TO:0000112 - disease resistance","PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os01g0194300","LOC_Os01g09800.1",{"$nulls":24},"_","pro13b.15, PROLM11","_","Prolamin 11",5," Seed - Physiological traits - Storage substances","GO:0042735 - protein body, GO:0005783 - endoplasmic reticulum",null,"PO:0009089 - endosperm ","Os05g0329700 ","LOC_Os05g26460.1",{"$nulls":6},"WRKY48","OsWRKY48","WRKY GENE 48","Rice WRKY gene48",5," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance",null,"Os05g0478400","LOC_Os05g40060.1",null,"Os05g0367800","Os05g0489900",-1.3878969,0]
[{"$nulls":25},"Os07g0500300","Os07g0500300",2.6447735,0,null,"Os03g0125000",2.9212205,"Os02g0182100",-1.0548993,{"$nulls":29},"SDT","miR156h, OsmiR156h, osmiR156h, osa-miR156h, osa-MIR156hosa-miR156h-3p osa-miR156h-5p","SEMIDWARF AND HIGH-TILLERING","micro RNA 156h, microRNA156h, osa-miRNA156h, semidwarf and high-tillering",6," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000396 - grain yield, TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000050 - inflorescence branching, TO:0000329 - tillering ability, TO:0000068 - lodging incidence, TO:0000207 - plant height","PO:0000009 - cultured plant callus , PO:0009005 - root , PO:0009025 - vascular leaf , PO:0009049 - inflorescence ",{"$nulls":26},"_","pro13b.20","_",null,5," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os05g0331532","LOC_Os05g26720.1",{"$nulls":6},"WRKY49","OsWRKY49","WRKY GENE 49","Rice WRKY gene49",5," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0010150 - leaf senescence","TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os05g0565900","LOC_Os05g49100.1",null,"Os01g0978400","Os06g0223700",-1.3885769,0]
[{"$nulls":25},"Os11g0472000","Os11g0472000",1.0102476,0,null,"Os07g0520600",2.920903,"Os07g0657200",-1.0547119,{"$nulls":29},"GHD7","Ghd2, Ghd7, OsGhd7, OsCCT26, OsCMF8, OsI, Ghd7/Hd4, Hd4, EH7-1/Hd4, Ghd7-0a, EH7-1, EH7/Ghd7, EH7, OsEH7","HEADING DATE 7","heading date 7, \\Grain number, plant height, and heading date7\\\", \\\"GRAIN NUMBER, PLANT HEIGHT AND HEADING DATE 7\\\", CCT domain-containing gene 26, CCT (CO, CO-LIKE and TOC1) domain protein 26, CCT domain protein 26, CCT MOTIF FAMILY (CMF) gene 8, Early heading 7\"",7," Vegetative organ - Culm,  Reproductive organ - Heading date,  Heterochrony,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:0009416 - response to light stimulus, GO:0009648 - photoperiodism, GO:0007623 - circadian rhythm","TO:0000137 - days to heading, TO:0000557 - secondary branch number, TO:0002759 - grain number, TO:0000050 - inflorescence branching, TO:0000447 - filled grain number, TO:0002616 - flowering time, TO:0000152 - panicle number, TO:0000469 - days to maturity, TO:0000456 - spikelet number, TO:0000229 - photoperiod sensitivity, TO:0000207 - plant height",null,"Os07g0261200","LOC_Os07g15770.1",{"$nulls":24},"HUB2","OsHUB2, FRRP1, DLN241, OsDLN241","HISTONE MONOUBIQUITINATION 2","HISTONE MONOUBIQUITINATION2, Flowering-Related RING Protein 1, DLN repressor 241, DLN motif protein 241",10," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048653 - anther development, GO:0010228 - vegetative to reproductive phase transition, GO:0010390 - histone monoubiquitination, GO:0048573 - photoperiodism, flowering, GO:2000028 - regulation of photoperiodism, flowering, GO:0004842 - ubiquitin-protein ligase activity, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0043687 - post-translational protein modification, GO:0033523 - histone H2B ubiquitination, GO:0016874 - ligase activity, GO:0005634 - nucleus, GO:0007346 - regulation of mitotic cell cycle, GO:0008270 - zinc ion binding, GO:0009555 - pollen development, GO:0009556 - microsporogenesis, GO:0009965 - leaf morphogenesis, GO:0010162 - seed dormancy","TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000180 - spikelet fertility","PO:0001004 - anther development stage , PO:0001007 - pollen development stage ","Os10g0565600 ","LOC_Os10g41590.1, LOC_Os10g41590.2",{"$nulls":6},"WRKY5","OsWRKY5","WRKY GENE 5","Rice WRKY gene5",5," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010150 - leaf senescence, GO:0006952 - defense response, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0010271 - regulation of chlorophyll catabolic process, GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0009646 - response to absence of light, GO:0009753 - response to jasmonic acid stimulus, GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0043565 - sequence-specific DNA binding","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000175 - bacterial blight disease resistance, TO:0000249 - leaf senescence, TO:0000303 - cold tolerance, TO:0002667 - abscisic acid content","PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os05g0137500","LOC_Os05g04640.1",null,"Os03g0790900","Os02g0559800",-1.391642,0]
[{"$nulls":25},"Os04g0464600","Os04g0464600",-1.3541418,0,null,"Os07g0634000",2.9199307,"Os04g0486900",-1.053949,{"$nulls":29},"SAMDC","SamDC, AdoMetDC, AdoMetDC1, OsSAMDC1","S-ADENOSYLMETHIONINE DECARBOXYLASE","S-adenosylmethionine decarboxylase, S-adenosylmethionine decarboxylase proenzyme, S-adenosylmethionine decarboxylase alpha chain, S-adenosylmethionine decarboxylase beta chain, S-adenosylmethionine decarboxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009651 - response to salt stress, GO:0009845 - seed germination, GO:0009555 - pollen development, GO:0006596 - polyamine biosynthetic process, GO:0016209 - antioxidant activity, GO:0009846 - pollen germination, GO:0008295 - spermidine biosynthetic process, GO:0006597 - spermine biosynthetic process, GO:0009409 - response to cold, GO:0004014 - adenosylmethionine decarboxylase activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000432 - temperature response trait, TO:0000303 - cold tolerance, TO:0000430 - germination rate, TO:0000421 - pollen fertility, TO:0000449 - grain yield per plant, TO:0000276 - drought tolerance",null,"Os04g0498600","LOC_Os04g42090.1, LOC_Os04g42090.2, LOC_Os04g42090.3, LOC_Os04g42090.4, LOC_Os04g42090.5, LOC_Os04g42095.1",{"$nulls":24},"BG1","OsaBG1, OsBG1","BIG GRAIN1","big grain1, big grain 1",3," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009733 - response to auxin stimulus, GO:0009630 - gravitropism","TO:0000163 - auxin sensitivity, TO:0000181 - seed weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0002693 - gravity response trait","PO:0025205 - shoot system vascular system , PO:0005028 - inflorescence vascular system ","Os03g0175800","LOC_Os03g07920.1",{"$nulls":6},"WRKY50","OsWRKY50","WRKY GENE 50","Rice WRKY gene50",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity,  Character as QTL - Germination","GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0009845 - seed germination, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os11g0117600","LOC_Os11g02540.1",null,"Os05g0320700","Os06g0680500",-1.3935474,0]
[{"$nulls":25},"Os12g0278800","Os12g0278800",1.08088,0,null,"Os04g0382300",2.9198606,"Os05g0148300",-1.0530885,{"$nulls":29},"PT8","OsPT8, PHT1-8, OsPht1;8, Pht1;8, PHT1;8, OsPHT1;8","PHOSPHATE TRANSPORTER 8","Probable inorganic phosphate transporter 1-8, Plant Phosphate Transporter 1;8",10," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0005783 - endoplasmic reticulum, GO:0042742 - defense response to bacterium, GO:0042594 - response to starvation, GO:0005315 - inorganic phosphate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0002221 - pattern recognition receptor signaling pathway, GO:0048831 - regulation of shoot development, GO:0002237 - response to molecule of bacterial origin, GO:0002238 - response to molecule of fungal origin, GO:0031348 - negative regulation of defense response, GO:0009733 - response to auxin stimulus, GO:0016036 - cellular response to phosphate starvation, GO:0009737 - response to abscisic acid stimulus, GO:0046685 - response to arsenic, GO:0015293 - symporter activity, GO:0006817 - phosphate transport, GO:0016020 - membrane","TO:0000074 - blast disease, TO:0000102 - phosphorus sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000163 - auxin sensitivity, TO:0000021 - copper sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000043 - root anatomy and morphology trait","PO:0025164 - root epidermal cell ","Os10g0444700","LOC_Os10g30790.2, LOC_Os10g30790.1",{"$nulls":24},"_","OspPLAIIIalpha, pPLAIIIalpha","_","Patatin-related phospholipase A III alpha",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits","GO:0009739 - response to gibberellin stimulus, GO:0008112 - nicotinamide N-methyltransferase activity, GO:0080113 - regulation of seed growth, GO:0080112 - seed growth, GO:0048366 - leaf development, GO:0016042 - lipid catabolic process, GO:0016787 - hydrolase activity, GO:0030244 - cellulose biosynthetic process","TO:0000040 - panicle length, TO:0000135 - leaf length, TO:0000166 - gibberellic acid sensitivity, TO:0000146 - seed length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000227 - root length, TO:0000655 - leaf development trait, TO:0000653 - seed development trait","PO:0007030 - seedling shoot emergence stage ","Os03g0254400 ","LOC_Os03g14950.1",{"$nulls":6},"WRKY52","OsWRKY52","WRKY GENE 52","Rice WRKY gene52",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000259 - heat tolerance",null,"Os11g0116600","LOC_Os11g02470.1",null,"Os01g0977200","Os05g0138300",-1.3977089,0]
[{"$nulls":25},"Os09g0555700","Os09g0555700",-1.3391366,0,null,"Os09g0433800",2.919576,"Os08g0532500",-1.0528625,{"$nulls":29},"GLP1","OsGLP1, GER1, GER5, GLP110, OsGER1, OsGER5, OsGLP8-14, GLP8-14","GERMIN-LIKE PROTEIN 1","Germin-like protein 8-14, Germin-like protein 5, Germin-like protein 1, Germin protein type 1, germin-like protein1",8," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0030145 - manganese ion binding, GO:0010229 - inflorescence development","TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020104 - leaf sheath ","Os08g0460000","LOC_Os08g35760.1",{"$nulls":24},"BAK1","OsI-BAK1, I-BAK1, OsBAK1","BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED KINASE 1","brassinosteroid insensitive 1-associated kinase 1",3," Vegetative organ - Leaf,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Insect resistance","GO:0009611 - response to wounding, GO:0009737 - response to abscisic acid stimulus, GO:0048366 - leaf development, GO:0009742 - brassinosteroid mediated signaling, GO:0009960 - endosperm development, GO:0009790 - embryonic development, GO:0005886 - plasma membrane, GO:0002213 - defense response to insect, GO:0010431 - seed maturation, GO:0009753 - response to jasmonic acid stimulus, GO:0016301 - kinase activity","TO:0000172 - jasmonic acid sensitivity, TO:0000064 - embryo related trait, TO:0000424 - brown planthopper resistance, TO:0000205 - white-backed planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000189 - embryoless, TO:0000028 - unfilled grain number, TO:0000655 - leaf development trait, TO:0002661 - seed maturation, TO:0002677 - brassinosteroid sensitivity","PO:0007631 - plant embryo stage , PO:0007632 - seed maturation stage , PO:0001050 - leaf development stage , PO:0007633 - endosperm development stage ","Os03g0440900","LOC_Os03g32580.1",{"$nulls":6},"WRKY53","OsWRKY53, WRKY-53","WRKY GENE 53","Rice WRKY gene53",5," Vegetative organ - Leaf,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009741 - response to brassinosteroid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0002213 - defense response to insect, GO:0080027 - response to herbivore, GO:0009409 - response to cold, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0006952 - defense response, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling","TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000397 - grain size, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0000391 - seed size, TO:0000206 - leaf angle, TO:0000454 - stem borer resistance, TO:0002677 - brassinosteroid sensitivity",null,"Os05g0343400","LOC_Os05g27730.1",null,"Os05g0119000","Os05g0207300",-1.3980923,0]
[{"$nulls":25},"Os08g0554400","Os08g0554400",-1.8515254,0,null,"Os06g0108500",2.9161224,"Os11g0543300",-1.0513479,{"$nulls":29},"AGO17","OsAGO17","ARGONAUTE 17","Protein argonaute 17",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0051512 - positive regulation of unidimensional cell growth, GO:0005634 - nucleus, GO:0031047 - gene silencing by RNA, GO:0003676 - nucleic acid binding, GO:0005739 - mitochondrion","TO:0000449 - grain yield per plant, TO:0000391 - seed size, TO:0000657 - spikelet anatomy and morphology trait, TO:0000576 - stem length, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000339 - stem thickness, TO:0000145 - internode length, TO:0000207 - plant height, TO:0000266 - chalky endosperm, TO:0000455 - seed set percent, TO:0000456 - spikelet number, TO:0000040 - panicle length, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length, TO:0000590 - grain weight","PO:0020141 - stem node ","Os02g0169400","LOC_Os02g07310.1",{"$nulls":24},"FUWA","OsFUWA","_",null,2," Seed - Morphological traits,  Seed - Morphological traits - Grain shape","GO:0010050 - vegetative phase change, GO:0009616 - virus induced gene silencing, GO:0009086 - methionine biosynthetic process, GO:0000394 - RNA splicing, via endonucleolytic cleavage and ligation, GO:0048367 - shoot development, GO:0051726 - regulation of cell cycle","TO:0000590 - grain weight, TO:0002730 - grain shape, TO:0000654 - shoot development trait, TO:0000621 - inflorescence development trait","PO:0006085 - root meristem , PO:0007089 - stem elongation stage , PO:0001083 - inflorescence development stage , PO:0020148 - shoot apical meristem , PO:0006342 - infructescence ","Os02g0234200 ","LOC_Os02g13950.1",{"$nulls":6},"WRKY54","OsWRKY54","WRKY GENE 54","Rice WRKY gene54",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0006952 - defense response, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance",null,"Os05g0478800","LOC_Os05g40080.1",null,"Os04g0569100","Os02g0120600",-1.403707,0]
[{"$nulls":25},"Os08g0504000","Os08g0504000",2.2477834,0,null,"Os03g0771500",2.9155293,"Os07g0603500",-1.05082,{"$nulls":29},"BC10","BC10, bc10, FC116, FC116/BC10, Osbc10, Osfc116","BRITTLE CULM 10","brittle culm 10, fragile culm 116",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0008375 - acetylglucosaminyltransferase activity, GO:0016020 - membrane, GO:0031225 - anchored to membrane, GO:0005886 - plasma membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009808 - lignin metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0009809 - lignin biosynthetic process, GO:0045492 - xylan biosynthetic process, GO:0009531 - secondary cell wall","TO:0000307 - hexose content, TO:0006006 - monosaccharide content, TO:0000300 - glucose content, TO:0000051 - stem strength, TO:0000731 - lignin content",null,"Os05g0170000","LOC_Os05g07790.1",{"$nulls":24},"GW7","GL7, OsGL7, OsGW7, qGW7, qGL7, SLG7, GL7/GW7/SLG7, qPY7, GL7/SLG7","GRAIN LENGTH 7","Grain Length on Chromosome 7, grain width QTL on chromosome 7, Slender grain on chromosome 7",7," Vegetative organ - Leaf,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009826 - unidimensional cell growth, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane","TO:0000734 - grain length, TO:0002730 - grain shape, TO:0000382 - 1000-seed weight, TO:0000371 - yield trait, TO:0000162 - seed quality, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0002757 - flag leaf length, TO:0000397 - grain size, TO:0002731 - grain length to width ratio","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os07g0603300","LOC_Os07g41200.1",{"$nulls":6},"WRKY55","OsWRKY55","WRKY GENE 55","Rice WRKY gene55",3," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0016049 - cell growth, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0034059 - response to anoxia","TO:0000276 - drought tolerance, TO:0000145 - internode length, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height","PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0020103 - flag leaf , PO:0009005 - root ","Os03g0321700","LOC_Os03g20550.3, LOC_Os03g20550.2, LOC_Os03g20550.1",null,"Os07g0225300","Os03g0762200",-1.4041151,0]
[{"$nulls":25},"Os05g0551000","Os05g0551000",1.4402326,0,null,"Os01g0864700",2.9150143,"Os02g0572900",-1.0505309,{"$nulls":29},"BC1L1","OsBC1L1, OsPCS13, PCS13","BRITTLE CULM-LIKE 1","(sativa BRITTLE CULM1-like 1), Phytochelatin synthase 13",3," Vegetative organ - Culm","GO:0009531 - secondary cell wall, GO:0009834 - secondary cell wall biogenesis, GO:0005886 - plasma membrane, GO:0009808 - lignin metabolic process, GO:0031225 - anchored to membrane, GO:0010215 - cellulose microfibril organization, GO:0016021 - integral to membrane, GO:0016023 - cytoplasmic membrane-bounded vesicle",null,"PO:0025034 - leaf ","Os03g0301200","LOC_Os03g18910.1",{"$nulls":24},"_",null,"_","a negative regulator of GL7",7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000734 - grain length",null,"Os07g0603400","LOC_Os07g41210.1",{"$nulls":6},"WRKY56","OsWRKY56","WRKY GENE 56","Rice WRKY gene56",1," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os01g0842801","LOC_Os01g62514.1",null,"Os09g0466400","Os09g0501600",-1.4043883,0]
[{"$nulls":25},"Os01g0785900","Os01g0785900",2.6635008,0,null,"Os03g0199200",2.9145947,"Os09g0434900",-1.0500418,{"$nulls":29},"PDR6","OsPDR6, OsABCG31, OsABCG31_1","PLEIOTROPIC DRUG RESISTANCE 6","sativa pleiotropic drug resistance 6, Pleiotropic drug resistance protein 6, ABC transporter superfamily ABCG subgroup member 31, ATP-binding Cassette Transporter G31",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0006810 - transport, GO:0042335 - cuticle development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0016021 - integral to membrane, GO:0010143 - cutin biosynthetic process","TO:0000074 - blast disease, TO:0000207 - plant height",null,"Os01g0177900","LOC_Os01g08260.1, LOC_Os01g08260.2",{"$nulls":24},"_","GL7-S1","_",null,7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000397 - grain size, TO:0000734 - grain length",{"$nulls":9},"WRKY57","OsWRKY57","WRKY GENE 57","Rice WRKY gene57",12," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity",null,null,"Os12g0102300","LOC_Os12g01180.1",null,"Os04g0488700","Os03g0678800",-1.4089929,0]
[{"$nulls":25},"Os01g0258700","Os01g0258700",-1.520782,0,null,"Os02g0158500",2.9138756,"Os03g0210883",-1.0499405,{"$nulls":29},"CKX9","OsCKX9","CYTOKININ  OXIDASE/DEHYDROGENASE 9","cytokinin oxidase 9",5," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0005634 - nucleus, GO:0009823 - cytokinin catabolic process, GO:0005615 - extracellular space, GO:0019139 - cytokinin dehydrogenase activity, GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity, GO:0009690 - cytokinin metabolic process, GO:0050660 - FAD binding, GO:0009725 - response to hormone stimulus, GO:0009733 - response to auxin stimulus, GO:0005829 - cytosol","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000582 - inflorescence number, TO:0000547 - primary branch number, TO:0000346 - tiller number, TO:0000011 - nitrogen sensitivity, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000207 - plant height, TO:0000167 - cytokinin sensitivity",null,"Os05g0374200","LOC_Os05g31040.1",{"$nulls":24},"_","GL7-S2","_",null,7," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009826 - unidimensional cell growth","TO:0000734 - grain length, TO:0000397 - grain size",{"$nulls":9},"WRKY58","OsWRKY58","WRKY GENE 58","Rice WRKY gene58",5," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0009751 - response to salicylic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0003700 - transcription factor activity, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance",null,"Os05g0528500","LOC_Os05g45230.1",null,"Os08g0206400","Os01g0907400",-1.4104996,0]
[{"$nulls":25},"Os01g0761100","Os01g0761100",-1.4190811,0,null,"Os05g0337400",2.9127464,"Os01g0184800",-1.0492573,{"$nulls":29},"HOX28","Oshox28, OsHox28","HOMEOBOX GENE 28","rice homeobox gene 28, Homeobox-leucine zipper protein HOX28, Homeodomain transcription factor HOX28, HD-ZIP protein HOX28",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0010600 - regulation of auxin biosynthetic process, GO:0030912 - response to deep water, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0010252 - auxin homeostasis, GO:0009959 - negative gravitropism","TO:0000567 - tiller angle, TO:0000524 - submergence tolerance, TO:0002693 - gravity response trait, TO:0002672 - auxin content",null,"Os06g0140400","LOC_Os06g04850.1",{"$nulls":24},"LRK2","OsLRK2, OsPSKR8, PSKR8","LEUCINE-RICH RECEPTOR-LIKE KINASE 2","leucine-rich receptor-like kinase 2, Phytosulfokine Receptor 8",2," Vegetative organ - Root,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0048527 - lateral root development, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005886 - plasma membrane","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000203 - bacterial leaf streak disease resistance, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000653 - seed development trait, TO:0001013 - lateral root number, TO:0000346 - tiller number","PO:0009066 - anther , PO:0005004 - shoot node , PO:0009005 - root , PO:0000055 - bud , PO:0001170 - seed development stage , PO:0009009 - plant embryo , PO:0025034 - leaf ","Os02g0154000","LOC_Os02g05970.1",{"$nulls":6},"WRKY6","OsWRKY6, WRKY-6, DLN103, OsDLN103","WRKY GENE6","Rice WRKY gene6, DLN repressor 103, DLN motif protein 103",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance",null,"Os03g0798500","LOC_Os03g58420.2, LOC_Os03g58420.1",null,"Os11g0116900","Os03g0815100",-1.4153786,0]
[{"$nulls":25},"Os07g0685700","Os07g0685700",1.1321497,0,null,"Os09g0535200",2.9101021,"Os12g0245000",-1.0467548,{"$nulls":29},"DEP1","OsDEP1, EP, qPE9-1, DN1, DEP1/DN1/qPE9-1, qNGR9, qDEP1, RGG4/DEP1/DN1/qPE9-1/OsGGC3, RGG4, OsDN1, OsGGC3, GGC3","DENSE AND ERECT PANICLE 1","dense and erect panicle 1, erect-pose panicle, DENSE PANICLE 1, DENSE AND ERECT PANICLE1, DENSE AND ERECT PANICLES 1, G gamma subunit DEP1, Heterotrimeric G Protein gamma4 Subunit",9," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0048573 - photoperiodism, flowering, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009651 - response to salt stress, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005882 - intermediate filament","TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0000734 - grain length, TO:0000382 - 1000-seed weight, TO:0002731 - grain length to width ratio, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000137 - days to heading, TO:0000050 - inflorescence branching, TO:0000397 - grain size, TO:0002759 - grain number, TO:0000456 - spikelet number",null,"Os09g0441900","LOC_Os09g26999.3, LOC_Os09g26999.2, LOC_Os09g26999.1",{"$nulls":24},"LRK3","OsLRK3, OsPSKR7, PSKR7","LEUCINE-RICH RECEPTOR-LIKE KINASE 3","leucine-rich receptor-like kinase 3, Phytosulfokine Receptor 7",2," Seed,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0016021 - integral to membrane, GO:0005524 - ATP binding","TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000653 - seed development trait","PO:0009005 - root , PO:0001170 - seed development stage , PO:0009009 - plant embryo ","Os02g0153900","LOC_Os02g05960.1",{"$nulls":6},"WRKY60","OsWRKY60","WRKY GENE 60","Rice WRKY gene60",3," Tolerance and resistance - Disease resistance","GO:0043565 - sequence-specific DNA binding, GO:0009751 - response to salicylic acid stimulus, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance",null,"Os03g0657400","LOC_Os03g45450.1",null,"Os11g0537350","Os08g0544900",-1.4161037,0]
[{"$nulls":25},"Os02g0574800","Os02g0574800",-1.0767645,0,null,"Os01g0755600",2.909745,"Os06g0502900",-1.046475,{"$nulls":29},"DWL1",null,"DWARFISM AND WITHERED LEAF TIP 1",null,3," Vegetative organ - Culm","GO:0007275 - multicellular organismal development",{"$nulls":28},"LRK4","OsLRK4, OsPSKR6, PSKR6","LEUCINE-RICH RECEPTOR-LIKE KINASE 4","leucine-rich receptor-like kinase 4, Phytosulfokine Receptor 6",2," Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009408 - response to heat, GO:0016021 - integral to membrane, GO:0005524 - ATP binding","TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000203 - bacterial leaf streak disease resistance","PO:0009009 - plant embryo , PO:0001170 - seed development stage , PO:0009005 - root ","Os02g0153700","LOC_Os02g05950.1",{"$nulls":6},"WRKY63","OsWRKY63","WRKY GENE 63",null,11," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance",null,"Os11g0686250","LOC_Os11g45920.1",null,"Os04g0620000","Os03g0751100",-1.4168788,0]
[{"$nulls":25},"Os01g0239000","Os01g0239000",-1.6234449,0,null,"Os01g0279100",2.9026222,"Os03g0349600",-1.0459194,{"$nulls":29},"MIR159A","miR159a, osa-miR159a, osa-MIR159a, OsmiR159a.2, miR159a.2, OsmiR159a.1, miR159a.1, osa-miR159a.1, osa-miR159a.2","MICRORNA159A",null,1," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009555 - pollen development, GO:0035068 - micro-ribonucleoprotein complex, GO:0048316 - seed development, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0048443 - stamen development","TO:0000074 - blast disease, TO:0000734 - grain length, TO:0006032 - panicle size, TO:0000696 - starch content, TO:0000053 - pollen sterility, TO:0000187 - anther color, TO:0000342 - panicle axis angle, TO:0000447 - filled grain number, TO:0000485 - sterility related trait, TO:0000207 - plant height, TO:0000653 - seed development trait, TO:0000371 - yield trait","PO:0001170 - seed development stage , PO:0001007 - pollen development stage ","Os01g0507000","LOC_Os01g32259.1",{"$nulls":24},"LRK7","OsLRK7, OsPSKR3, PSKR3","LEUCINE-RICH RECEPTOR-LIKE KINASE 7","leucine-rich receptor-like kinase 7, Phytosulfokine Receptor 3",2," Seed","GO:0016021 - integral to membrane, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009009 - plant embryo , PO:0009005 - root ","Os02g0153200","LOC_Os02g05920.1",{"$nulls":6},"WRKY64","OsWRKY64","WRKY GENE 64","Rice WRKY gene64",12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010039 - response to iron ion, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000259 - heat tolerance, TO:0000224 - iron sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os12g0116700","LOC_Os12g02450.1",null,"Os05g0395300","Os07g0109500",-1.417437,0]
[{"$nulls":25},"Os05g0491500","Os05g0491500",-1.1722183,0,null,"Os07g0517400",2.9014337,"Os06g0644100",-1.045771,{"$nulls":29},"HSFA2D","HSfA2d, OsHsfA2d, OsHsf-08, rHsf7, HSF08, OsHSF8, HSF8, HSF7, OsHSF7, OsHSFA2dI, OsHSFA2dII, OsHSFA2dIII, OsHsfA6b, HsfA6b, OsHsf2d, Hsf2d","HEAT STRESS TRANSCRIPTION FACTOR A2D","Heat stress transcription factor A2d, Heat stress transcription factor A-2d, Heat stress transcription factor 8, Heat stress transcription factor 7",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0048571 - long-day photoperiodism, GO:0009629 - response to gravity, GO:0009926 - auxin polar transport, GO:0005829 - cytosol, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm, GO:0006350 - transcription, GO:0006986 - response to unfolded protein, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006950 - response to stress, GO:0009408 - response to heat, GO:0009734 - auxin mediated signaling pathway","TO:0000075 - light sensitivity, TO:0000259 - heat tolerance, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0002693 - gravity response trait",null,"Os03g0161900","LOC_Os03g06630.1, LOC_Os03g06630.2",{"$nulls":24},"LRK8","OsLRK8, OsPSKR1, PSKR1","LEUCINE-RICH RECEPTOR-LIKE KINASE 8","leucine-rich receptor-like kinase 8, Phytosulfokine Receptor 2",2," Seed,  Tolerance and resistance - Disease resistance","GO:0016021 - integral to membrane, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease, TO:0000653 - seed development trait","PO:0009009 - plant embryo , PO:0001170 - seed development stage ","Os02g0153100","LOC_Os02g05910.1",{"$nulls":6},"WRKY65","OsWRKY65","WRKY GENE65","Rice WRKY gene65",12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance",null,"Os12g0116800","LOC_Os12g02470.1",null,"Os03g0410900","Os12g0632700",-1.4181906,0]
[{"$nulls":25},"Os06g0703900","Os06g0703900",-1.4425235,0,null,"Os09g0433000",2.9014251,"Os10g0501300",-1.0453898,{"$nulls":29},"LCS","OsHAK1, HAK1","LOW CS ACCUMULATION","High-affinity Potassium(K+) Transporter 1, Potassium transporter 1, low Cs accumulation",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0051365 - cellular response to potassium ion starvation, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0006813 - potassium ion transport, GO:0009674 - potassium:sodium symporter activity, GO:0030955 - potassium ion binding","TO:0000207 - plant height, TO:0006001 - salt tolerance",null,"Os04g0401700","LOC_Os04g32920.1, LOC_Os04g32920.2, LOC_Os04g32920.3, LOC_Os04g32920.4, LOC_Os04g32920.5",{"$nulls":24},"FLO7","Flo7, flo7(t), flo-7","FLOURY ENDOSPERM 7","floury endosperm7, floury-7, floury 7",5," Seed - Physiological traits - Storage substances",null,"TO:0000104 - floury endosperm",{"$nulls":9},"WRKY66","OsWRKY66","WRKY GENE 66","Rice WRKY gene66",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance",null,"Os02g0698800","LOC_Os02g47060.1",null,"Os01g0102900","Os04g0450100",-1.4202466,0]
[{"$nulls":25},"Os03g0329900","Os03g0329900",-0.98224515,0,null,"Os04g0577800",2.8987265,"Os01g0253300",-1.0444578,{"$nulls":29},"KNAT7","HOS66, HB365, OsKNAT7","KNOTTED ARABIDOPSIS THALIANA 7","HOMEOBOX ORYZA SATIVA 66, Homeobox protein knotted-1-like 3, Homeobox protein HOS66, KNOTTED ARABIDOPSIS THALIANA7, KNOX ARABIDOPSIS THALIANA7",3," Vegetative organ - Culm,  Reproductive organ - Inflorescence,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0010229 - inflorescence development, GO:0009664 - plant-type cell wall organization, GO:0009809 - lignin biosynthetic process, GO:0080006 - internode patterning, GO:0001558 - regulation of cell growth, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009834 - secondary cell wall biogenesis","TO:0000731 - lignin content, TO:0000397 - grain size, TO:0000051 - stem strength, TO:0000621 - inflorescence development trait, TO:0000068 - lodging incidence","PO:0001083 - inflorescence development stage ","Os03g0123500","LOC_Os03g03164.3, LOC_Os03g03164.2, LOC_Os03g03164.1",{"$nulls":24},"GSD1","OsREM6.6, REM6.6, OsGSD1","GRAIN SETTING DEFECT1","Grain setting defect1, Grain setting defect 1, Remorin 6.6, remorin group 6 member 6, remorin family protein GSD1",4," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0010497 - plasmodesmata-mediated intercellular transport, GO:0010431 - seed maturation, GO:0008643 - carbohydrate transport, GO:0009506 - plasmodesma","TO:0000328 - sucrose content, TO:0000333 - sugar content, TO:0000382 - 1000-seed weight, TO:0000291 - carbohydrate content, TO:0000696 - starch content, TO:0000399 - grain thickness, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0002661 - seed maturation","PO:0000071 - companion cell , PO:0007632 - seed maturation stage ","Os04g0620200","LOC_Os04g52920.1, LOC_Os04g52920.2",{"$nulls":6},"WRKY67","OsWRKY67","WRKY GENE 67","Rice WRKY gene67",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009863 - salicylic acid mediated signaling pathway, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding","TO:0000175 - bacterial blight disease resistance, TO:0000477 - panicle blast disease resistance, TO:0000468 - leaf blast disease resistance, TO:0000303 - cold tolerance",null,"Os05g0183100","LOC_Os05g09020.1, LOC_Os05g09020.2",null,"Os04g0106300","Os07g0164900",-1.4210954,0]
[{"$nulls":25},"Os03g0408600","Os03g0408600",-1.85879,0,null,"Os06g0140700",2.8959248,"Os05g0519400",-1.0439752,{"$nulls":29},"PROG1","OsPROG1","PROSTRATE GROWTH 1","zinc-finger nuclear transcription factor PROG1",7," Vegetative organ - Culm,  Character as QTL - Yield and productivity,  Other","GO:0048873 - homeostasis of number of cells within a tissue, GO:0009536 - plastid, GO:0005634 - nucleus, GO:0016563 - transcription activator activity","TO:0000440 - grain number per plant, TO:0000449 - grain yield per plant, TO:0000547 - primary branch number, TO:0002759 - grain number, TO:0000152 - panicle number, TO:0000207 - plant height, TO:0000557 - secondary branch number, TO:0000567 - tiller angle","PO:0005001 - basal axillary shoot system , PO:0008017 - leaf sheath pulvinus , PO:0008019 - leaf lamina base , PO:0009081 - inflorescence branch ","Os07g0153600","LOC_Os07g05900.1",{"$nulls":24},"UF3GT","UGT, OsUFGT/Os3GT, OsUF3GT","_","UDP-glycosyltransferase, UDP-glycosyl transferase, anthocyanidin 3-O-glucosyltransferase",6," Biochemical character,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits","GO:0016758 - transferase activity, transferring hexosyl groups, GO:0009718 - anthocyanin biosynthetic process","TO:0000707 - pericarp color, TO:0000071 - anthocyanin content",null,"Os06g0192100","LOC_Os06g09240.1",{"$nulls":6},"WRKY68","OsWRKY68","WRKY GENE 68","Rice WRKY gene68",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0043565 - sequence-specific DNA binding, GO:0009739 - response to gibberellin stimulus, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000188 - drought sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000615 - abscisic acid sensitivity",null,"Os04g0605100","LOC_Os04g51560.1",null,"Os09g0451500","Os05g0150500",-1.4351007,0]
[{"$nulls":25},"Os01g0842200","Os01g0842200",-1.2700797,0,null,"Os06g0126500",2.894828,"Os06g0184766",-1.0436883,{"$nulls":29},"FC1","OsCAD7, fc1, CAD7","FLEXIBLE CULM 1","flexible culm1, FLEXIBLE CULM1, Protein FLEXIBLE CULM 1, Cinnamyl alcohol dehydrogenase 7",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0055114 - oxidation reduction, GO:0018456 - aryl-alcohol dehydrogenase activity, GO:0009617 - response to bacterium, GO:0009808 - lignin metabolic process, GO:0044036 - cell wall macromolecule metabolic process, GO:0009626 - plant-type hypersensitive response, GO:0045551 - cinnamyl-alcohol dehydrogenase activity, GO:0008270 - zinc ion binding, GO:0009809 - lignin biosynthetic process, GO:0000166 - nucleotide binding, GO:0009834 - secondary cell wall biogenesis, GO:0048046 - apoplast","TO:0000733 - lignin biosynthesis trait, TO:0000051 - stem strength, TO:0000011 - nitrogen sensitivity","PO:0009047 - stem , PO:0020104 - leaf sheath ","Os04g0612700","LOC_Os04g52280.1",{"$nulls":24},"F3H1","OsF3H-1, F3H-1, OsF3H1, OsF3H, F3H","FLAVANONE 3-HYDROXYLASE 1","Flavanone 3-hydroxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Character as QTL - Yield and productivity","GO:0009718 - anthocyanin biosynthetic process, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0045486 - naringenin 3-dioxygenase activity, GO:0010224 - response to UV-B, GO:0002213 - defense response to insect, GO:0009698 - phenylpropanoid metabolic process, GO:0016491 - oxidoreductase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0051555 - flavonol biosynthetic process","TO:0000328 - sucrose content, TO:0000205 - white-backed planthopper resistance, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0000290 - flavonoid content, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color, TO:0000180 - spikelet fertility",null,"Os04g0662600","LOC_Os04g56700.1",{"$nulls":6},"WRKY69","OsWRKY69","WRKY GENE 69","Rice WRKY gene69",8," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance","GO:0010150 - leaf senescence, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0007568 - aging, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity","TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001054 - 4 leaf senescence stage ","Os08g0386200","LOC_Os08g29660.1",null,"Os01g0824600","Os11g0186500",-1.4423836,0]
[{"$nulls":25},"Os08g0187500","Os08g0187500",-1.7797227,0,null,"Os03g0315800",2.8938558,"Os12g0515500",-1.0432993,{"$nulls":29},"DOF7","OsDof7, Dof7, OsDof-7, OsDOF11, DOF11, OsDof9, Dof9","DNA BINDING WITH ONE FINGER 7","DNA BINDING WITH ONE FINGER 11",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0048364 - root development, GO:0003700 - transcription factor activity, GO:0010087 - phloem or xylem histogenesis, GO:0009409 - response to cold, GO:0015770 - sucrose transport, GO:0010067 - procambium histogenesis, GO:0042742 - defense response to bacterium, GO:0003677 - DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000346 - tiller number, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000175 - bacterial blight disease resistance, TO:0000227 - root length, TO:0000300 - glucose content, TO:0000303 - cold tolerance, TO:0006005 - fructose content, TO:0000328 - sucrose content","PO:0020110 - scutellum , PO:0020141 - stem node , PO:0009005 - root , PO:0005020 - vascular bundle , PO:0000071 - companion cell , PO:0005421 - parenchyma , PO:0000034 - vascular system ","Os02g0707200","LOC_Os02g47810.1",{"$nulls":24},"F3H2","OsF3H-2, F3H-2, OsF3H2, FNS1, OsFNS1","FLAVANONE 3-HYDROXYLASE 2","Flavanone 3-hydroxylase 2",10," Biochemical character,  Coloration,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits","GO:0009962 - regulation of flavonoid biosynthetic process, GO:0048316 - seed development, GO:0009718 - anthocyanin biosynthetic process, GO:0051555 - flavonol biosynthetic process","TO:0000290 - flavonoid content, TO:0000653 - seed development trait","PO:0001170 - seed development stage ","Os10g0536400","LOC_Os10g39140.2, LOC_Os10g39140.3, LOC_Os10g39140.4, LOC_Os10g39140.1",{"$nulls":6},"WRKY7","OsWRKY7","WRKY GENE 7","Rice WRKY gene7",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0030912 - response to deep water, GO:0009409 - response to cold, GO:0006952 - defense response","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000524 - submergence tolerance",null,"Os05g0537100","LOC_Os05g46020.1",null,"Os02g0100100","Os06g0703900",-1.4425235,0]
[{"$nulls":25},"Os10g0404900","Os10g0404900",3.3204067,0,null,"Os06g0725200",2.8921776,"Os07g0691800",-1.0429226,{"$nulls":29},"SP3","OsDof15, Dof15, OsDof-15, DOF15","SHORT PANICLE 3","Dof zinc factor 15, Dof transcription factor 15, DNA BINDING WITH ONE FINGER 15, Short Panicle 3",3," Vegetative organ - Culm,  Vegetative organ - Root,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0048364 - root development, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0009690 - cytokinin metabolic process, GO:0009873 - ethylene mediated signaling pathway, GO:0008284 - positive regulation of cell proliferation, GO:0009651 - response to salt stress, GO:0010082 - regulation of root meristem growth, GO:0010081 - regulation of inflorescence meristem growth","TO:0000656 - root development trait, TO:0000557 - secondary branch number, TO:0002660 - cytokinin content, TO:0000434 - root activity, TO:0000371 - yield trait, TO:0000592 - 1000-dehulled grain weight, TO:0000373 - inflorescence anatomy and morphology trait, TO:0002692 - root meristem development, TO:0000040 - panicle length, TO:0000396 - grain yield, TO:0000227 - root length, TO:0000145 - internode length, TO:0000173 - ethylene sensitivity, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000734 - grain length, TO:0000050 - inflorescence branching, TO:0000456 - spikelet number, TO:0006032 - panicle size","PO:0009049 - inflorescence ","Os03g0764900 ","LOC_Os03g55610.1",{"$nulls":24},"_","Kala1","_","Key gene for black coloration by anthocyanin accumulation on chromosome 1",1," Coloration - Anthocyanin,  Seed","GO:0031542 - positive regulation of anthocyanin biosynthetic process","TO:0000707 - pericarp color, TO:0000071 - anthocyanin content",{"$nulls":9},"WRKY70","OsWRKY70","WRKY GENE 70","Rice WRKY gene70",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0002213 - defense response to insect, GO:0002237 - response to molecule of bacterial origin, GO:0042742 - defense response to bacterium, GO:0080027 - response to herbivore, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009651 - response to salt stress, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance, TO:0000273 - armyworm resistance, TO:0000424 - brown planthopper resistance, TO:0000315 - bacterial disease resistance, TO:0002668 - jasmonic acid content, TO:0000454 - stem borer resistance, TO:0006001 - salt tolerance, TO:0000261 - insect damage resistance, TO:0000276 - drought tolerance",null,"Os05g0474800","LOC_Os05g39720.1",null,"Os06g0690200","Os07g0667000",-1.4479376,0]
[{"$nulls":25},"Os07g0129700","Os07g0129700",2.2871413,0,null,"Os06g0683900",2.8914773,"Os01g0805100",-1.0421728,{"$nulls":29},"PRR59","OsPRR59, Os-PRR59, Prr5, OsPRR5, OsCCT38, CCT38","PSEUDO-RESPONSE REGULATOR 59","pseudo-response regulator 5, CCT domain-containing gene 38, CCT (CO, CO-LIKE and TOC1) domain protein 38, CCT domain protein 38",11," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006355 - regulation of transcription, DNA-dependent, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048576 - positive regulation of short-day photoperiodism, flowering, GO:0007623 - circadian rhythm, GO:0000156 - two-component response regulator activity","TO:0000207 - plant height, TO:0000456 - spikelet number, TO:0000137 - days to heading, TO:0002616 - flowering time",null,"Os11g0157600","LOC_Os11g05930.5, LOC_Os11g05930.1, LOC_Os11g05930.2, LOC_Os11g05930.3, LOC_Os11g05930.4",{"$nulls":24},"_","OsLTPL36, LTPL36","_",null,3," Biochemical character,  Seed,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Seed - Physiological traits - Taste,  Character as QTL - Yield and productivity","GO:0009845 - seed germination, GO:0009790 - embryonic development, GO:0048316 - seed development","TO:0000162 - seed quality, TO:0000280 - seedling vigor, TO:0000620 - embryo development trait, TO:0000604 - fat and essential oil content, TO:0000266 - chalky endosperm, TO:0000382 - 1000-seed weight, TO:0000180 - spikelet fertility, TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0005360 - aleurone layer , PO:0007631 - plant embryo stage , PO:0009088 - seed coat , PO:0007057 - 0 seed germination stage ","Os03g0369100 ","LOC_Os03g25350.1",{"$nulls":6},"WRKY72","OsWRKY72, WRKY-72","WRKY GENE 72","Rice WRKY gene72",11," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0007568 - aging, GO:0043565 - sequence-specific DNA binding, GO:0002213 - defense response to insect, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0006952 - defense response, GO:0010150 - leaf senescence","TO:0000303 - cold tolerance, TO:0000261 - insect damage resistance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity","PO:0001054 - 4 leaf senescence stage ","Os11g0490900","LOC_Os11g29870.1",null,"Os12g0595800","Os03g0126000",-1.4519099,0]
[{"$nulls":25},"Os04g0569100","Os04g0569100",-1.7505628,0,null,"Os01g0860700",2.8908746,"Os11g0210300",-1.0419011,{"$nulls":29},"EMF2B","OsEMF2b, EMF2b","EMBRYONIC FLOWER 2B","EMBRYONIC FLOWER 2b",9," Vegetative organ - Culm,  Seed - Morphological traits - Embryo,  Character as QTL - Germination","GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0010187 - negative regulation of seed germination, GO:0010336 - gibberellic acid homeostasis, GO:0009740 - gibberellic acid mediated signaling","TO:0002675 - gibberellic acid content, TO:0000207 - plant height, TO:0000430 - germination rate","PO:0007633 - endosperm development stage , PO:0025281 - pollen , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009005 - root , PO:0009006 - shoot system , PO:0020056 - tegmen ","Os09g0306800","LOC_Os09g13630.1",{"$nulls":24},"PIMT1","OsPIMT1, OsPIMT1'","PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1","Protein repair L-isoaspartyl methyltransferase 1, PROTEIN L-ISOASPARTYL O-METHYLTRANSFERASE  1, L-isoaspartylmethyltransferase 1",8," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Longevity","GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0030091 - protein repair, GO:0009845 - seed germination, GO:0007568 - aging, GO:0005737 - cytoplasm, GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, GO:0005829 - cytosol","TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability, TO:0000430 - germination rate, TO:0000653 - seed development trait, TO:0000435 - seed longevity","PO:0007057 - 0 seed germination stage , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0001170 - seed development stage ","Os08g0557000","LOC_Os08g44280.1, LOC_Os08g44280.2",{"$nulls":6},"WRKY73","OsWRKY73","WRKY GENE 73","Rice WRKY gene73",6," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0007568 - aging, GO:0009408 - response to heat, GO:0043565 - sequence-specific DNA binding, GO:0010150 - leaf senescence, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os06g0146250","LOC_Os06g05380.1",null,"Os02g0813500","Os03g0145200",-1.4545937,0]
[{"$nulls":25},"Os03g0640800","Os03g0640800",1.6751747,0,null,"Os03g0409600",2.8889217,"Os04g0636100",-1.0413266,{"$nulls":29},"FIE1","OsFIE1, OsWD40-154, OsEnS-116, OsFIE1/OsWD40-154, WD40-154","FERTILIZATION-INDEPENDENT ENDOSPERM 1","FERTILIZATION-INDEPENDENT ENDOSPERM1, Fertilization-Independent Endosperm 1, dwarf and flower aberrant mutant, endosperm-specific gene 116",8," Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016571 - histone methylation, GO:0043078 - polar nucleus, GO:0000003 - reproduction, GO:0010342 - cellularization of endosperm, GO:0006349 - genetic imprinting, GO:0048316 - seed development, GO:0009409 - response to cold, GO:0009790 - embryonic development","TO:0000455 - seed set percent, TO:0000653 - seed development trait, TO:0002653 - endosperm storage protein content, TO:0002673 - amino acid content, TO:0000391 - seed size","PO:0020056 - tegmen , PO:0001170 - seed development stage , PO:0009089 - endosperm ","Os08g0137250","LOC_Os08g04290.1",{"$nulls":24},"PIMT2","OsPIMT2, OsPIMT2'-1, OsPIMT2'-2, deltaOsPIMT2","PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 2","Protein repair L-isoaspartyl methyltransferase 2, PROTEIN L-ISOASPARTYL O-METHYLTRANSFERASE 2",8," Biochemical character,  Seed - Physiological traits - Longevity","GO:0048316 - seed development, GO:0030091 - protein repair, GO:0009737 - response to abscisic acid stimulus, GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, GO:0005634 - nucleus, GO:0009507 - chloroplast, GO:0009845 - seed germination","TO:0000345 - seed viability, TO:0000653 - seed development trait, TO:0000435 - seed longevity, TO:0000615 - abscisic acid sensitivity","PO:0025034 - leaf , PO:0007057 - 0 seed germination stage , PO:0001170 - seed development stage , PO:0009009 - plant embryo ","Os04g0481400","LOC_Os04g40540.1, LOC_Os04g40540.2, LOC_Os04g40540.3",{"$nulls":6},"WRKY74","OsWRKY74","WRKY GENE 74","Rice WRKY gene74",9," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0043565 - sequence-specific DNA binding, GO:0016036 - cellular response to phosphate starvation, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0010106 - cellular response to iron ion starvation, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0006995 - cellular response to nitrogen starvation, GO:0009408 - response to heat","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000011 - nitrogen sensitivity, TO:0000043 - root anatomy and morphology trait","PO:0009005 - root , PO:0025034 - leaf ","Os09g0334500","LOC_Os09g16510.1",null,"Os01g0159800","Os11g0176200",-1.457712,0]
[{"$nulls":25},"Os01g0848400","Os01g0848400",2.314164,0,null,"Os11g0701100",2.8815715,"Os03g0843100",-1.0404965,{"$nulls":29},"BLS1","OsBLS1, OsG1L6, G1L6, TH1, OsTH1, TH1/BSG1/BLS1/AFD1, BSG1, OsBSG1, AFD1, OsAFD1, BH1, OsBH1","BEAK LIKE SPIKELET 1","G1 LIKE PROTEIN 6, TRIANGULAR HULL1, TRIANGULAR HULL 1, BEAK LIKE SPIKELET1, abnormal ower and dwarf1, beak-shaped grain1, BEAK-SHAPED GRAIN 1, ABNORMAL FLOWER AND DWARF 1",2," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009416 - response to light stimulus, GO:0009299 - mRNA transcription, GO:0008361 - regulation of cell size, GO:0007275 - multicellular organismal development, GO:0001558 - regulation of cell growth, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0051302 - regulation of cell division, GO:0048437 - floral organ development, GO:0010229 - inflorescence development, GO:0009908 - flower development, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000614 - lemma shape, TO:0000621 - inflorescence development trait, TO:0000040 - panicle length, TO:0000657 - spikelet anatomy and morphology trait, TO:0000180 - spikelet fertility, TO:0000564 - spikelet width, TO:0000590 - grain weight, TO:0000145 - internode length, TO:0002762 - width of grain with hull, TO:0006011 - lodicule shape, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000421 - pollen fertility, TO:0000397 - grain size, TO:0002730 - grain shape","PO:0009049 - inflorescence , PO:0009037 - lemma , PO:0009038 - palea , PO:0001083 - inflorescence development stage , PO:0025585 - floral organ formation stage , PO:0020032 - plumule , PO:0020104 - leaf sheath , PO:0001048 - palea development stage , PO:0001047 - lemma development stage ","Os02g0811000","LOC_Os02g56610.1",{"$nulls":24},"SLC1","OsSLC1, GA20OX7, OsGA20ox7, ga20ox7, 2-ODD4, Os2-ODD4, 2ODD4, Os2ODD4","SLENDER AND CRINKLY LEAF 1","rice GA 20-oxidase7, GA 20-oxidase 7, gibberellin C-20 oxidase 7, Gibberellin-20 oxidase 7, 2-oxoglutarate-dependent dioxygenase 4",8," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed","GO:0048366 - leaf development, GO:0048316 - seed development, GO:0016491 - oxidoreductase activity, GO:0009686 - gibberellin biosynthetic process, GO:0048367 - shoot development, GO:0046872 - metal ion binding, GO:0048364 - root development, GO:0009697 - salicylic acid biosynthetic process","TO:0000370 - leaf width, TO:0000655 - leaf development trait, TO:0000241 - leaf number, TO:0000207 - plant height, TO:0000227 - root length, TO:0002675 - gibberellic acid content","PO:0001031 - 4 root elongation stage , PO:0001170 - seed development stage , PO:0025527 - shoot system development stage ","Os08g0560000 ","LOC_Os08g44590.1",{"$nulls":6},"WRKY75","OsWRKY75","WRKY GENE 75","Rice WRKY gene75",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding","TO:0000188 - drought sensitivity, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os05g0321900",null,null,"Os12g0190000","Os11g0117400",-1.458721,0]
[{"$nulls":25},"Os03g0165300","Os03g0165300",-2.0352552,0,null,"Os03g0293500",2.8784456,"Os06g0207950",-1.0402465,{"$nulls":29},"BC7","OsCesA4, OsCESA4, CESA4, OS_CESA04, BC11, bc7t, Bc7(t), bc-7, OsCesA 4, CesA4, FC17/CESA4, FC17, OsFC17","BRITTLE CULM 7","Cellulose synthase A catalytic subunit 4 [UDP-forming], Cellulose synthase A catalytic subunit 4, brittle culm 7, brittle culm11, fragile culm 17",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0030244 - cellulose biosynthetic process, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0005515 - protein binding, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0009642 - response to light intensity, GO:0009610 - response to symbiotic fungus, GO:0005886 - plasma membrane, GO:0007047 - cell wall organization, GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009834 - secondary cell wall biogenesis, GO:0016760 - cellulose synthase (UDP-forming) activity","TO:0000303 - cold tolerance, TO:0000051 - stem strength, TO:0000011 - nitrogen sensitivity, TO:0000460 - light intensity sensitivity","PO:0025025 - root system ","Os01g0750300","LOC_Os01g54620.1",{"$nulls":24},"_","OsEnS-57, EnS-57, CDP3.1","_","endosperm-specific gene 57, cupin domain containing protein 3.1, Cupincin",3," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0045735 - nutrient reservoir activity, GO:0009845 - seed germination, GO:0009505 - plant-type cell wall, GO:0019915 - lipid storage, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage , PO:0007022 - seed imbibition stage ","Os03g0793700","LOC_Os03g57960.1",{"$nulls":6},"WRKY76","OsWRKY76, OsWRKY76.1, OsWRKY76.2, OsWRKY76.3","WRKY GENE 76","Rice WRKY gene76",9," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0002238 - response to molecule of fungal origin, GO:0009409 - response to cold, GO:0009611 - response to wounding, GO:0048364 - root development, GO:0002237 - response to molecule of bacterial origin, GO:0009753 - response to jasmonic acid stimulus, GO:0050832 - defense response to fungus, GO:0009699 - phenylpropanoid biosynthetic process, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009697 - salicylic acid biosynthetic process, GO:0009695 - jasmonic acid biosynthetic process, GO:0003700 - transcription factor activity","TO:0000227 - root length, TO:0000074 - blast disease, TO:0002668 - jasmonic acid content, TO:0000656 - root development trait, TO:0000172 - jasmonic acid sensitivity, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance","PO:0025034 - leaf , PO:0001031 - 4 root elongation stage ","Os09g0417600","LOC_Os09g25060.1",null,"Os08g0278900","Os04g0684900",-1.4628081,0]
[{"$nulls":25},"Os03g0109400","Os03g0109400",1.4288174,0,null,"Os05g0320500",2.8782513,"Os01g0104800",-1.0396909,{"$nulls":29},"CLPC3","ClpC3, OsCLPC3","CLASS I CLP ATPASE C3","class I Clp ATPase C3",11," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003677 - DNA binding, GO:0006289 - nucleotide-excision repair, GO:0004518 - nuclease activity, GO:0019538 - protein metabolic process, GO:0017111 - nucleoside-triphosphatase activity, GO:0008233 - peptidase activity, GO:0005515 - protein binding","TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000152 - panicle number, TO:0000421 - pollen fertility, TO:0000040 - panicle length",null,"Os11g0267400","LOC_Os11g16590.1",{"$nulls":24},"_","OsEnS-59","_","endosperm-specific gene 59",3," Biochemical character,  Seed - Physiological traits - Dormancy","GO:0009845 - seed germination, GO:0006694 - steroid biosynthetic process, GO:0016021 - integral to membrane, GO:0016114 - terpenoid biosynthetic process, GO:0016491 - oxidoreductase activity",null,"PO:0009010 - seed , PO:0007057 - 0 seed germination stage ","Os03g0842900","LOC_Os03g62590.1",{"$nulls":6},"WRKY77","OsWRKY77, WRKY-77","WRKY GENE 77","Rice WRKY gene77",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance",null,"Os01g0584900","LOC_Os01g40260.1",null,"Os02g0742200","Os06g0670000",-1.4642972,0]
[{"$nulls":25},"Os03g0680800","Os03g0680800",2.1520936,0,null,"Os12g0149750",2.8761532,"Os02g0256000",-1.0396782,{"$nulls":29},"SHR1","OsSHR1, OsGRAS-38, OsGRAS38, GRAS-38, GRAS38, DLN189, OsDLN189, OsSHR, SHR","SHORT ROOT GENE 1","rice SHORT  ROOT gene1, SHORT-ROOT 1, SHORTROOT1, SHORT-ROOT protein 1, GRAS protein 38, DLN repressor 189, DLN motif protein 189",7," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0010078 - maintenance of root meristem identity, GO:0010082 - regulation of root meristem growth, GO:0010073 - meristem maintenance, GO:0009740 - gibberellic acid mediated signaling, GO:0009738 - abscisic acid mediated signaling, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0007275 - multicellular organismal development, GO:0045449 - regulation of transcription, GO:0048364 - root development, GO:0010374 - stomatal complex development","TO:0006001 - salt tolerance, TO:0000255 - sheath blight disease resistance, TO:0000207 - plant height, TO:0000227 - root length, TO:0000329 - tillering ability, TO:0002692 - root meristem development, TO:0000166 - gibberellic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000656 - root development trait, TO:0000566 - stomatal frequency","PO:0009005 - root , PO:0006085 - root meristem , PO:0000258 - root cortex , PO:0007520 - root development stage ","Os07g0586900","LOC_Os07g39820.1",{"$nulls":24},"_","OsEnS-76, pro13b.19","_","endosperm-specific gene 76",5," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os05g0331366","LOC_Os05g26690.1",{"$nulls":6},"WRKY87","OsWRKY87, OsSUSIBA2-like","WRKY GENE 87","Rice WRKY gene87, SUSABA2 Ortholog, Sugar signalling in barley 2-like",7," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus","TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity",null,"Os07g0583700","LOC_Os07g39480.1",null,"Os02g0323000","Os03g0281600",-1.4710671,0]
[{"$nulls":25},"Os03g0771500","Os03g0771500",2.9155293,0,null,"Os02g0566000",2.8761482,"Os03g0281500",-1.0393327,{"$nulls":29},"AMY2A","Amy2A*(RAmy2A), AMY1.5, AMYC2, RAmy2A, Amy4, Amy2A","ALPHA-AMYLASE 2A","Alpha-amylase2A, Alpha-amylase isozyme 2A, Alpha-amylase isozyme C2, Alpha-amylase-2A, Amylase-4",6," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length",null,"Os06g0713800","LOC_Os06g49970.2",{"$nulls":24},"RLCK192","OsEnS-81, OsRLCK192","RECEPTOR-LIKE CYTOPLASMIC KINASE 192","endosperm-specific gene 81, Receptor-like Cytoplasmic Kinase 192",5," Seed","GO:0048316 - seed development","TO:0000653 - seed development trait","PO:0009010 - seed , PO:0001170 - seed development stage ","Os05g0591800","LOC_Os05g51400.1",{"$nulls":6},"WRKY102","OsWRKY102","WRKY GENE 102",null,1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009751 - response to salicylic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus","TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000179 - biotic stress trait, TO:0000401 - plant growth hormone sensitivity, TO:0000188 - drought sensitivity, TO:0000112 - disease resistance",null,"Os01g0182700","LOC_Os01g08710.1, LOC_Os01g08710.2",null,"Os07g0516300","Os03g0351100",-1.4800086,0]
[{"$nulls":25},"Os06g0208100","Os06g0208100",-2.105268,0,null,"Os11g0250600",2.8752651,"Os07g0233300",-1.0386173,{"$nulls":29},"KAO","OsKAO, kao, CYP88A5, OSKAO, Os KAO, RPE1","ENT-KAURENE OXIDASE","rice ent-kaurenoic acid oxidase, ent-kaurenoic acid oxidase, Putative cytochrome P450 DWARF3, reduced pollen elongation1",6," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0004497 - monooxygenase activity, GO:0022900 - electron transport chain, GO:0009566 - fertilization, GO:0009685 - gibberellin metabolic process, GO:0009860 - pollen tube growth, GO:0009686 - gibberellin biosynthetic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0032940 - secretion by cell","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000599 - enzyme activity, TO:0000357 - growth and development trait, TO:0000420 - fertility related trait, TO:0000421 - pollen fertility, TO:0002675 - gibberellic acid content",null,"Os06g0110000","LOC_Os06g02019.1",{"$nulls":24},"_","OsEnS-86, EnS-86, MEG3","_","endosperm-specific gene 86, Maternally Expressed Gene 3",6," Seed - Morphological traits,  Character as QTL - Yield and productivity",null,"TO:0000304 - seed thickness, TO:0000382 - 1000-seed weight",null,"Os06g0498150","LOC_Os06g30280.1",{"$nulls":6},"WRKY8","OsWRKY8","WRKY GENE 8","Rice WRKY gene8",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0009737 - response to abscisic acid stimulus, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium","TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000524 - submergence tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance",null,"Os05g0583000","LOC_Os05g50610.1, LOC_Os05g50610.2",null,"Os02g0697600","Os12g0176700",-1.4809494,0]
[{"$nulls":25},"Os09g0528200","Os09g0528200",1.4219437,0,null,"Os03g0306400",2.8726413,"Os09g0408900",-1.0385976,{"$nulls":29},"AMY3E","Amy3D/E*(RAmy3D/E), alpha Amy8, alphaAmy8, AmyII-3, AMY1.4, Amy3E, Amy3D/E*, RAmy3D/E, Amy9, RAmy3E, alphaAmy8-C, AMY3E/AMY1.4, OsAmy3E","ALPHA-AMYLASE 3E","Alpha-amylase3E, Alpha-amylase isozyme 3E precursor, Alpha-amylase isozyme 3E, Alpha-amylase-3E, Amylase-9, Alpha-amylase-3D",8," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0080006 - internode patterning, GO:0009845 - seed germination, GO:0009408 - response to heat, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005975 - carbohydrate metabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0001666 - response to hypoxia, GO:0009739 - response to gibberellin stimulus, GO:0051775 - response to redox state","TO:0000544 - mesocotyl length, TO:0000259 - heat tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000015 - oxygen sensitivity","PO:0007057 - 0 seed germination stage ","Os08g0473600","LOC_Os08g36900.1, LOC_Os08g36900.2",{"$nulls":24},"_","OsEnS-115","_","endosperm-specific gene 115",8," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",null,null,"Os08g0127900","LOC_Os08g03410.1",{"$nulls":6},"WRKY90","OsWRKY90","WRKY GENE 90","Rice WRKY gene90",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006952 - defense response, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0010150 - leaf senescence, GO:0010039 - response to iron ion, GO:0050832 - defense response to fungus, GO:0043565 - sequence-specific DNA binding","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000224 - iron sensitivity, TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance","PO:0001054 - 4 leaf senescence stage ","Os09g0481700","LOC_Os09g30400.1, LOC_Os09g30400.2, LOC_Os09g30400.3",null,"Os01g0141700","Os06g0270900",-1.4823111,0]
[{"$nulls":25},"Os03g0325600","Os03g0325600",-2.0727797,0,null,"Os06g0160100",2.8726199,"Os12g0432301",-1.0380515,{"$nulls":29},"SLRL1","OsSLRL1, OsGAI, OsSLRL, OsGRAS-1, OsGRAS1, GAI, SLRL, GRAS-1, GRAS1","SLENDER RICE LIKE 1","SLR1-like1, GRAS protein 1",1," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0080006 - internode patterning, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0010468 - regulation of gene expression, GO:0045449 - regulation of transcription, GO:0009413 - response to flooding, GO:0009739 - response to gibberellin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000544 - mesocotyl length, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000286 - submergence sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0646300","LOC_Os01g45860.1",{"$nulls":24},"HAP5L","OsEnS-133, OsHAP5L, OsNF-YC12, NF-YC12, OsNF-YC11, NF-YC11, NFYC11","HAP5L SUBUNIT OF CCAAT-BOX BINDING COMPLEX ","endosperm-specific gene 133, Nuclear Factor Y subunit C12, NUCLEAR FACTOR-Y subunit C11, NUCLEAR FACTOR-Y subunit NF-YC11, NF-YC transcription factor 11, NF-YC subunit 11, NF-YC family 11",10," Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity,  Other","GO:0005737 - cytoplasm, GO:0048316 - seed development, GO:0005634 - nucleus, GO:0019252 - starch biosynthetic process, GO:0016602 - CCAAT-binding factor complex, GO:0009660 - amyloplast organization, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009960 - endosperm development","TO:0000696 - starch content, TO:0000734 - grain length, TO:0000196 - amylose content, TO:0000598 - protein content, TO:0000590 - grain weight, TO:0000487 - endosperm color, TO:0002655 - starch grain size, TO:0002656 - starch grain shape, TO:0000592 - 1000-dehulled grain weight, TO:0000266 - chalky endosperm","PO:0005360 - aleurone layer , PO:0009089 - endosperm , PO:0007632 - seed maturation stage , PO:0001170 - seed development stage , PO:0006220 - central endosperm ","Os10g0191900","LOC_Os10g11580.1",{"$nulls":6},"WRKY61","OsWRKY61, OsWRKY103, WRKY103","WRKY GENE 61","Rice WRKY gene61",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os11g0685700","LOC_Os11g45850.1",null,"Os01g0978000","Os02g0198700",-1.4825311,0]
[{"$nulls":25},"Os03g0170600","Os03g0170600",3.4161003,0,null,"Os05g0230700",2.8708909,"Os07g0690900",-1.0373789,{"$nulls":29},"TCP5","OsTCP5","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 5","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 5, TEOSINTE BRANCHED1/CYCLOIDEA/PCFs 5, TEOSINTE BRANCHED1/ CYCLOIDEA/PCF transcription factor 5, TCP transcription factor 5",1," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009736 - cytokinin mediated signaling, GO:0009755 - hormone-mediated signaling, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0005739 - mitochondrion, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000401 - plant growth hormone sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os01g0763200","LOC_Os01g55750.1, LOC_Os01g55750.2, LOC_Os01g55750.3",{"$nulls":24},"AAP10D","OsAAP10D, OsAAP6, AAP6, qPC1","AMINO ACID PERMEASE 10D","amino acid permease 10D, amino acid permease 6, amino acid/auxin permease 6, quantitative trait locus (QTL) for GPC (grain protein content) on chromosome 1",1," Seed - Physiological traits - Storage substances","GO:0015171 - amino acid transmembrane transporter activity, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane","TO:0000162 - seed quality, TO:0000598 - protein content",null,"Os01g0878700","LOC_Os01g65670.1",{"$nulls":6},"WRKY9","OsWRKY9","WRKY GENE 9","Rice WRKY gene9",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0006952 - defense response, GO:0003700 - transcription factor activity, GO:0009725 - response to hormone stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009863 - salicylic acid mediated signaling pathway, GO:0043565 - sequence-specific DNA binding","TO:0000401 - plant growth hormone sensitivity, TO:0000188 - drought sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0289600","LOC_Os01g18584.1",null,"Os12g0633600","Os06g0116800",-1.4856375,0]
[{"$nulls":25},"Os04g0541700","Os04g0541700",-1.6064421,0,null,"Os09g0279500",2.8651154,"Os05g0437200",-1.0361265,{"$nulls":29},"BHLH101","OsbHLH101, bHLH101, OsPIF1, PIF1","BASIC HELIX-LOOP-HELIX PROTEIN 101","basic helix-loop-helix protein 101, phytochrome-interacting factor 1",4," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length",null,"Os04g0618600","LOC_Os04g52770.1",{"$nulls":24},"RLCK103","GUDK, OsRLCK103","RECEPTOR-LIKE CYTOPLASMIC KINASE 103","GROWTH UNDER DROUGHT KINASE, Receptor-like Cytoplasmic Kinase 103",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0179400","LOC_Os03g08170.1",{"$nulls":6},"GLH8","glh8","GREEN LEAFHOPPER RESISTANCE 8","Green leafhopper resistance8, Green leafhopper resistance 8, green leafhopper resistance-8",null," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os12g0210300","Os05g0408200",-1.4974707,0]
[{"$nulls":25},"Os04g0627000","Os04g0627000",-1.9535375,0,null,"Os04g0369000",2.8612995,"Os12g0562900",-1.0359453,{"$nulls":29},"MYBAS1","OsMYBAS1","MYB ALTERNATIVE SPLICING 1","Transcription factor MYBAS1, MYB alternative splicing 1",11," Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0034059 - response to anoxia, GO:0009413 - response to flooding, GO:0009845 - seed germination, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity","TO:0000166 - gibberellic acid sensitivity, TO:0000544 - mesocotyl length, TO:0000114 - flooding related trait","PO:0007057 - 0 seed germination stage ","Os11g0700500","LOC_Os11g47460.1, LOC_Os11g47460.4, LOC_Os11g47460.3, LOC_Os11g47460.2",{"$nulls":24},"S40-1 ","Dfu584, Duf584, OsS40-1","S40 PROTEIN 1","DUF584 domain-containing protein, S40 protein 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010150 - leaf senescence, GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009646 - response to absence of light, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0005634 - nucleus","TO:0000249 - leaf senescence, TO:0000276 - drought tolerance, TO:0000466 - carbon content, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009005 - root , PO:0009010 - seed , PO:0001054 - 4 leaf senescence stage ","Os05g0531100","LOC_Os05g45450.1",{"$nulls":6},"ASA2","OASA2 (=ASA2), OsASA2, OASA2, ASalpha2, OsASalpha2, OASA2","ANTHRANILATE SYNTHASE ALPHA-SUBUNIT 2","anthranilate synthase alpha subunit 2, Anthranilate synthase alpha 2 subunit",3," Biochemical character,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0004049 - anthranilate synthase activity, GO:0046685 - response to arsenic, GO:0000162 - tryptophan biosynthetic process, GO:0002213 - defense response to insect","TO:0000424 - brown planthopper resistance",null,"Os03g0264400","LOC_Os03g15780.2, LOC_Os03g15780.5, LOC_Os03g15780.4, LOC_Os03g15780.1",null,"Os02g0776800","Os03g0644000",-1.5007976,0]
[{"$nulls":25},"Os09g0379600","Os09g0379600",-3.011609,0,null,"Os06g0237800",2.8589337,"Os06g0195900",-1.0359007,{"$nulls":29},"SLR1","slr1-1, slr1, slr, GAI, OsGAI, OsSLR1, Os SLR1, OsRGA1, OsGRAS-18, OsGRAS-18, GRAS-18, GRAS18, SLR-1","SLENDER RICE1","slender rice1-1, slender rice, Giberellin-insensitive gene homolog, DELLA protein SLR1, Protein SLENDER RICE1, Gibberellic acid-insensitive mutant protein, Slender Rice 1, SLENDER 1, SLENDER1, GRAS protein 18",3," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0042127 - regulation of cell proliferation, GO:0002213 - defense response to insect, GO:0009413 - response to flooding, GO:0040008 - regulation of growth, GO:0048364 - root development, GO:0009416 - response to light stimulus, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0009651 - response to salt stress, GO:0009740 - gibberellic acid mediated signaling, GO:0009938 - negative regulation of gibberellic acid mediated signaling, GO:0010468 - regulation of gene expression, GO:0045449 - regulation of transcription, GO:0045926 - negative regulation of growth, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009409 - response to cold","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0006036 - stem elongation, TO:0000205 - white-backed planthopper resistance, TO:0000075 - light sensitivity, TO:0006001 - salt tolerance, TO:0000576 - stem length, TO:0000401 - plant growth hormone sensitivity, TO:0000227 - root length, TO:0000145 - internode length, TO:0000492 - leaf shape, TO:0000207 - plant height, TO:0000084 - root number, TO:0000112 - disease resistance, TO:0000166 - gibberellic acid sensitivity, TO:0000017 - anatomy and morphology related trait, TO:0000286 - submergence sensitivity, TO:0000303 - cold tolerance","PO:0007089 - stem elongation stage , PO:0000003 - whole plant , PO:0009005 - root , PO:0009006 - shoot system , PO:0009025 - vascular leaf , PO:0020142 - stem internode ","Os03g0707600","LOC_Os03g49990.1",{"$nulls":24},"DI19-1","OsDi19-1","DROUGHT-INDUCED 19-1","drought-induced 19-1, dehydration-induced 19-1",5," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009845 - seed germination",null,"PO:0007057 - 0 seed germination stage ","Os05g0562200","LOC_Os05g48800.1, LOC_Os05g48800.2, LOC_Os05g48800.3",{"$nulls":6},"HSP26","OsHSP26, Oshsp26, OsHSP26.7, HSP26.7","26 KDA HEAT SHOCK PROTEIN","26kDa heat shock protein",3," Tolerance and resistance - Stress tolerance","GO:0003773 - heat shock protein activity, GO:0009408 - response to heat, GO:0009507 - chloroplast, GO:0042026 - protein refolding","TO:0000259 - heat tolerance",null,"Os03g0245800","LOC_Os03g14180.1",null,"Os08g0440500","Os08g0120000",-1.5058984,0]
[{"$nulls":25},"Os03g0366800","Os03g0366800",-0.97498304,0,null,"Os02g0158100",2.85886,"Os07g0246200",-1.0358893,{"$nulls":29},"NSP2","Os NSP2, OsNSP2, OsGRAS-13, OsGRAS13, GRAS-13, GRAS13, OsGRAS12, GRAS12","NODULATION SIGNALING PATHWAY 2","Nodulation Signalling Pathway2, Symbiotic GRAS-Type Transcription Factor NSP2, GRAS protein 13",3," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0005634 - nucleus","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000476 - growth hormone content, TO:0000329 - tillering ability",null,"Os03g0263300","LOC_Os03g15680.1",{"$nulls":24},"GL3.2","GL3.2","GRAIN LENGTH 3.2","Grain Length 3.2",3," Biochemical character,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0080113 - regulation of seed growth","TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000734 - grain length, TO:0000391 - seed size",null,"Os03g0417700","LOC_Os03g30420.1",{"$nulls":6},"HXK1","OsHXK1","HEXOKINASE-1","Hexokinase 1",7," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0009646 - response to absence of light, GO:0019318 - hexose metabolic process, GO:0009555 - pollen development, GO:0051321 - meiotic cell cycle, GO:0051607 - defense response to virus, GO:0043068 - positive regulation of programmed cell death, GO:0050687 - negative regulation of defense response to virus, GO:0009658 - chloroplast organization, GO:0009749 - response to glucose stimulus, GO:0042593 - glucose homeostasis, GO:0010150 - leaf senescence, GO:0005524 - ATP binding, GO:0004396 - hexokinase activity, GO:0006096 - glycolysis","TO:0002667 - abscisic acid content, TO:0000020 - black streak dwarf virus resistance, TO:0000605 - hydrogen peroxide content, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0000495 - chlorophyll content, TO:0000300 - glucose content, TO:0000357 - growth and development trait","PO:0025034 - leaf , PO:0001054 - 4 leaf senescence stage , PO:0001007 - pollen development stage ","Os07g0446800","LOC_Os07g26540.1",null,"Os01g0173900","Os08g0112700",-1.5087461,0]
[{"$nulls":25},"Os02g0579600","Os02g0579600",-1.0919329,0,null,"Os07g0459000",2.8564465,"Os03g0246800",-1.0353475,{"$nulls":29},"SAUR11","OsSAUR11","SMALL AUXIN-UP RNA 11","Small auxin-up RNA 11",2," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009733 - response to auxin stimulus","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity",null,"Os02g0643800","LOC_Os02g42990.1",{"$nulls":24},"CEP6","OsCEP6, OsCEP6.1, CEP6.1, OsCEP13, CEP13","C-TERMINALLY ENCODED PEPTIDE 6","C-terminally encoded peptide 13",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0080050 - regulation of seed development, GO:0048364 - root development, GO:0010229 - inflorescence development, GO:0048831 - regulation of shoot development, GO:0008361 - regulation of cell size, GO:0009414 - response to water deprivation, GO:0006995 - cellular response to nitrogen starvation, GO:0046686 - response to cadmium ion","TO:0000654 - shoot development trait, TO:0000402 - grain width, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000382 - 1000-seed weight, TO:0000149 - seed width, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000734 - grain length","PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os08g0475500","LOC_Os08g37070.1",{"$nulls":6},"MI","OsMI","SALT TOLERANCE (T)",null,3," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",{"$nulls":5},"Os08g0412800","Os02g0198900",-1.5140389,0]
[{"$nulls":25},"Os07g0605200","Os07g0605200",2.3901968,0,null,"Os09g0249000",2.8527138,"Os08g0250900",-1.0348444,{"$nulls":29},"MIF1","OsMIF1","MINI ZINC FINGER 1","mini zinc finger 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0046872 - metal ion binding, GO:0003700 - transcription factor activity, GO:0080006 - internode patterning, GO:0009739 - response to gibberellin stimulus","TO:0000544 - mesocotyl length, TO:0000166 - gibberellic acid sensitivity",null,"Os11g0128300","LOC_Os11g03420.1",{"$nulls":24},"HYPRP21","OsHyPRP21, HyP/GRP21, OsHyPRP42, HyPRP42","HYBRID PROLINE- OR GLYCINE-RICH PROTEIN 21","hybrid proline- or glycine-rich protein 21, Hybrid Proline-Rich Protein 42",10," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance","GO:0009845 - seed germination, GO:0050832 - defense response to fungus, GO:0008233 - peptidase activity","TO:0000253 - seed dormancy, TO:0000074 - blast disease",null,"Os10g0554800","LOC_Os10g40614.1",{"$nulls":6},"PIN1B","PIN1A, OsPIN1A, OsPIN1a, REH1, OsPIN1, OsPIN1b, REH1/OsPIN1","PIN PROTEIN 1B","PIN PROTEIN 1A, the rice homolog of A. thaliana EIR1, PIN-FORMED 1b, PIN-formed 1, rice ethylene insensitive root 1",2," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0045177 - apical part of cell, GO:0005215 - transporter activity, GO:0010229 - inflorescence development, GO:0048830 - adventitious root development, GO:0009630 - gravitropism, GO:0016021 - integral to membrane, GO:0010358 - leaf shaping, GO:0009638 - phototropism, GO:0009505 - plant-type cell wall, GO:0009733 - response to auxin stimulus, GO:0006810 - transport, GO:0009725 - response to hormone stimulus, GO:0048449 - floral organ formation, GO:0010051 - xylem and phloem pattern formation, GO:0051607 - defense response to virus, GO:0010338 - leaf formation, GO:0009908 - flower development, GO:0016020 - membrane, GO:0009506 - plasmodesma, GO:0009735 - response to cytokinin stimulus, GO:0009926 - auxin polar transport, GO:0048826 - cotyledon morphogenesis, GO:0009734 - auxin mediated signaling pathway, GO:0005737 - cytoplasm, GO:0009925 - basal plasma membrane, GO:0055085 - transmembrane transport, GO:0048364 - root development, GO:0009921 - auxin efflux carrier complex","TO:0000329 - tillering ability, TO:0002639 - shoot branching, TO:0000656 - root development trait, TO:0002672 - auxin content, TO:0000017 - anatomy and morphology related trait, TO:0002652 - root phototropism, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000020 - black streak dwarf virus resistance, TO:0000011 - nitrogen sensitivity, TO:0000257 - root branching, TO:0006022 - floral organ development trait, TO:0000167 - cytokinin sensitivity","PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007600 - floral organ differentiation stage , PO:0000019 - gynoecium primordium , PO:0009066 - anther , PO:0025488 - flower bract primordium , PO:0009037 - lemma , PO:0008013 - anther vascular system ","Os02g0743400","LOC_Os02g50960.2, LOC_Os02g50960.1",null,"Os04g0637000","Os06g0658900",-1.5231868,0]
[{"$nulls":25},"Os05g0203800","Os05g0203800",-3.5836766,0,null,"Os11g0175700",2.8523216,"Os02g0757900",-1.0344414,{"$nulls":29},"PL3","OsPL3","_","PLUS3 domain-containing protein",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0016593 - Cdc73/Paf1 complex, GO:0003677 - DNA binding","TO:0000557 - secondary branch number, TO:0000396 - grain yield, TO:0000391 - seed size, TO:0000397 - grain size, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000447 - filled grain number, TO:0000455 - seed set percent","PO:0025034 - leaf ","Os01g0775100","LOC_Os01g56780.3, LOC_Os01g56780.2, LOC_Os01g56780.1",{"$nulls":24},"_","OsPP23, PP23, PKG, OsPKG","_","Protein phosphatase 23, cGMP-Dependent Protein Kinase",2," Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0046872 - metal ion binding, GO:0048316 - seed development, GO:0005952 - cAMP-dependent protein kinase complex, GO:0005886 - plasma membrane, GO:0009740 - gibberellic acid mediated signaling, GO:0019934 - cGMP-mediated signaling, GO:0006470 - protein amino acid dephosphorylation, GO:0009739 - response to gibberellin stimulus, GO:0080006 - internode patterning, GO:0009651 - response to salt stress, GO:0004722 - protein serine/threonine phosphatase activity, GO:0009845 - seed germination, GO:0005524 - ATP binding, GO:0008603 - cAMP-dependent protein kinase regulator activity, GO:0000003 - reproduction","TO:0006001 - salt tolerance, TO:0000455 - seed set percent, TO:0000180 - spikelet fertility, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000145 - internode length, TO:0000421 - pollen fertility, TO:0000181 - seed weight, TO:0000590 - grain weight, TO:0000430 - germination rate, TO:0000166 - gibberellic acid sensitivity","PO:0007057 - 0 seed germination stage ","Os02g0281000","LOC_Os02g17970.2, LOC_Os02g17970.1",{"$nulls":6},"RAC4","OsRAC4, OsRac4, ROP4, OsRop4","RAC/ROP-TYPE GTPASE 4","Rac-like GTP-binding protein 4, GTPase protein ROP4, Rac/Rop-type GTPase 4",6," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005737 - cytoplasm, GO:0019898 - extrinsic to membrane, GO:0005525 - GTP binding, GO:0050832 - defense response to fungus, GO:0007264 - small GTPase mediated signal transduction","TO:0000074 - blast disease",null,"Os06g0234200","LOC_Os06g12790.1, LOC_Os06g12790.3",null,"Os09g0563300","Os07g0572900",-1.5310793,0]
[{"$nulls":25},"Os08g0112700","Os08g0112700",-1.5087461,0,null,"Os08g0193100",2.8519497,"Os10g0381800",-1.0341378,{"$nulls":29},"_","ST01","_","Stvbi paralog",11," Vegetative organ - Culm",null,"TO:0020033 - glume length, TO:0000346 - tiller number",null,"Os11g0514100","LOC_Os11g31500.1",{"$nulls":24},"_","OsMED9, MED9, OsMED9_1, MED9_1","_","Mediator complex protein OsMED9, Mediator 9_1",1," Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity",null,"TO:0000396 - grain yield, TO:0000382 - 1000-seed weight",null,"Os01g0501000","LOC_Os01g31629.1, LOC_Os01g31629.2, LOC_Os01g31629.3",{"$nulls":6},"ZIP3","OsZIP3","ZINC TRANSPORTER 3","zinc transporter 3, Zrt-Irt-like protein 3, Zinc-regulated transporter 3, zinc transporter OsZIP3",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006829 - zinc ion transport, GO:0046686 - response to cadmium ion, GO:0005739 - mitochondrion, GO:0005385 - zinc ion transmembrane transporter activity, GO:0010043 - response to zinc ion",null,"PO:0006016 - leaf epidermis , PO:0020104 - leaf sheath ","Os04g0613000","LOC_Os04g52310.1",null,"Os03g0657400","Os01g0142300",-1.5335928,0]
[{"$nulls":25},"Os01g0922800","Os01g0922800",-1.0300881,0,null,"Os12g0420300",2.8395805,"Os08g0162800",-1.034099,{"$nulls":29},"SMAX1","OsSMAX1","SUPPRESSOR OF MAX2-1","Suppressor of MAX2-1",8," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0080006 - internode patterning, GO:0009610 - response to symbiotic fungus, GO:0005634 - nucleus, GO:0009646 - response to absence of light","TO:0000460 - light intensity sensitivity, TO:0006036 - stem elongation, TO:0000207 - plant height, TO:0000544 - mesocotyl length",null,"Os08g0250900","LOC_Os08g15230.1",{"$nulls":24},"RLCK3","OsRLCK3","RECEPTOR-LIKE CYTOPLASMIC KINASE 3","Receptor-like Cytoplasmic Kinase 3",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0048316 - seed development","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0113300","LOC_Os01g02300.1",{"$nulls":6},"RAD23","OsRAD23","DNA REPAIR PROTEIN RAD23","Probable DNA repair protein RAD23",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003684 - damaged DNA binding, GO:0005634 - nucleus, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0006289 - nucleotide-excision repair, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0020004 - shoot sodium content",null,"Os09g0407200","LOC_Os09g24200.1, LOC_Os09g24200.2",null,"Os04g0169500","Os02g0254700",-1.5338165,0]
[{"$nulls":25},"Os06g0217300","Os06g0217300",1.9053074,0,null,"Os12g0539751",2.8380764,"Os12g0163600",-1.0337161,{"$nulls":29},"NRFG6","OsNRFG6","NEO-TETRAPLOID RICE FERTILITY RELATED GENE 6","neo-tetraploid rice fertility related gene 6",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0048544 - recognition of pollen","TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000152 - panicle number",null,"Os06g0602500","LOC_Os06g40030.1",{"$nulls":24},"RLCK5","OsRLCK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 5","Receptor-like Cytoplasmic Kinase 5",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity","TO:0000605 - hydrogen peroxide content, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000255 - sheath blight disease resistance","PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os01g0114100","LOC_Os01g02390.2, LOC_Os01g02390.1",{"$nulls":6},"RAD51A1","OsRAD51A1","DNA REPAIR PROTEIN RAD51A","DNA repair protein RAD51A1",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006281 - DNA repair, GO:0005524 - ATP binding, GO:0003684 - damaged DNA binding, GO:0008094 - DNA-dependent ATPase activity",null,null,"Os11g0615800","LOC_Os11g40150.1",null,"Os06g0726400","Os01g0972000",-1.5380784,0]
[{"$nulls":25},"Os03g0215400","Os03g0215400",-3.8352463,0,null,"Os07g0505200",2.836643,"Os04g0501000",-1.032732,{"$nulls":29},"KIN7L","OsKIN7L","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 7L","kinesin motor domain containing protein 7L",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0008017 - microtubule binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement","TO:0000455 - seed set percent, TO:0000421 - pollen fertility, TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000371 - yield trait",null,"Os11g0552600","LOC_Os11g35090.1",{"$nulls":24},"RLCK6","OsRLCK6","RECEPTOR-LIKE CYTOPLASMIC KINASE 6","Receptor-like Cytoplasmic Kinase 6",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0114300","LOC_Os01g02400.1, LOC_Os01g02400.2, LOC_Os01g02400.3",{"$nulls":6},"RAD51B","OsRAD51B, OsRad51B","DNA REPAIR PROTEIN RAD51B","DNA repair protein RAD51B",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008094 - DNA-dependent ATPase activity, GO:0003677 - DNA binding, GO:0010332 - response to gamma radiation, GO:0045002 - double-strand break repair via single-strand annealing, GO:0006302 - double-strand break repair, GO:0005524 - ATP binding, GO:0006259 - DNA metabolic process","TO:0000161 - radiation response trait",null,"Os05g0121700 ","LOC_Os05g03050.1",null,"Os01g0611100","Os03g0208500",-1.5386328,0]
[{"$nulls":25},"Os08g0153600","Os08g0153600",-0.96272975,0,null,"Os01g0508000",2.8348684,"Os01g0310800",-1.0326945,{"$nulls":29},"KIN14M","OsKIN14M","KINESIN MOTOR DOMAIN CONTAINING PROTEIN 14M","kinesin motor domain containing protein 14M",11," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Seed - Morphological traits,  Character as QTL - Yield and productivity","GO:0005524 - ATP binding, GO:0003777 - microtubule motor activity, GO:0007018 - microtubule-based movement, GO:0016887 - ATPase activity, GO:0008017 - microtubule binding","TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000421 - pollen fertility, TO:0000455 - seed set percent, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000152 - panicle number, TO:0000592 - 1000-dehulled grain weight",null,"Os06g0554700","LOC_Os06g36080.1",{"$nulls":24},"RLCK39","OsRLCK39, OsUSP4, USP4","RECEPTOR-LIKE CYTOPLASMIC KINASE 39","Receptor-like Cytoplasmic Kinase 39, universal stress protein 4",1," Reproductive organ - panicle,  Seed","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0006950 - response to stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0581400","LOC_Os01g39970.1",{"$nulls":6},"RBCL","rbcL, rbcA, OsrbcL","RUBISCO LARGE SUBUNIT","Ribulose bisphosphate carboxylase large chain precursor, Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit, ribulose 1, 5-bisphosphate carboxylase/oxygenase large chain, RUBISCO large chain, ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit","Pt"," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009853 - photorespiration, GO:0000287 - magnesium ion binding, GO:0055114 - oxidation reduction, GO:0004497 - monooxygenase activity, GO:0009573 - chloroplast ribulose bisphosphate carboxylase complex, GO:0009536 - plastid, GO:0019253 - reductive pentose-phosphate cycle, GO:0015977 - carbon utilization by fixation of carbon dioxide, GO:0009507 - chloroplast, GO:0016984 - ribulose-bisphosphate carboxylase activity, GO:0010332 - response to gamma radiation","TO:0006001 - salt tolerance",null,null,"LOC_Osp1g00420",null,"Os02g0634500","Os12g0507200",-1.5388855,0]
[{"$nulls":25},"Os07g0670000","Os07g0670000",-2.3624628,0,null,"Os06g0572400",2.8347607,"Os05g0464300",-1.0324746,{"$nulls":29},"TBP2.2","OsTBP2.2","TATA-BOX BINDING PROTEIN 2.2","TATA-box binding protein 2.2",10," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006352 - transcription initiation, GO:0008134 - transcription factor binding, GO:0000978 - RNA polymerase II regulatory transcription factor site sequence-specific DNA binding, GO:0003700 - transcription factor activity, GO:0009414 - response to water deprivation, GO:0015979 - photosynthesis, GO:0043531 - ADP binding, GO:0009699 - phenylpropanoid biosynthetic process, GO:0000165 - MAPKKK cascade, GO:0003677 - DNA binding, GO:0006366 - transcription from RNA polymerase II promoter, GO:0006952 - defense response","TO:0001018 - transpiration rate, TO:0001015 - photosynthetic rate, TO:0000276 - drought tolerance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000552 - shoot dry weight, TO:0000522 - stomatal conductance, TO:0001017 - water use efficiency","PO:0025034 - leaf , PO:0009047 - stem ","Os10g0432300","LOC_Os10g29660.2",{"$nulls":24},"RLCK40","OsRLCK40, PTK1, OsPTK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 40","Receptor-like Cytoplasmic Kinase 40, Protein Tyrosine Kinase 1",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0030912 - response to deep water, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding","TO:0000524 - submergence tolerance, TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0009066 - anther , PO:0009030 - carpel , PO:0009051 - spikelet , PO:0000003 - whole plant , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0588500","LOC_Os01g40590.1",{"$nulls":6},"ASTOL1","RCS1, rcs1, OsOASTL-A2, OASTL-A2, OsASTOL1","ARSENITE TOLERANT 1 ","rice cysteine synthase (sulfer, nitrogen and light response)-1, rice cysteine synthase-1, O-acetylserine(thiol) lyase A2, arsenite tolerant 1, CYSTEINE SYNTHASE 1",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030170 - pyridoxal phosphate binding, GO:0046688 - response to copper ion, GO:0016740 - transferase activity, GO:0004124 - cysteine synthase activity, GO:0005737 - cytoplasm, GO:0006535 - cysteine biosynthetic process from serine, GO:0009507 - chloroplast, GO:0046685 - response to arsenic, GO:0000103 - sulfate assimilation, GO:0019344 - cysteine biosynthetic process, GO:0006750 - glutathione biosynthetic process, GO:0046938 - phytochelatin biosynthetic process","TO:0000436 - spikelet sterility, TO:0000164 - stress trait, TO:0000021 - copper sensitivity, TO:0000075 - light sensitivity, TO:0000485 - sterility related trait","PO:0009011 - plant structure , PO:0000003 - whole plant ","Os12g0625000","LOC_Os12g42980.1, LOC_Os12g42980.2",null,"Os04g0627900","Os01g0559600",-1.5450315,0]
[{"$nulls":25},"Os08g0151300","Os08g0151300",5.5473714,0,null,"Os02g0596000",2.8330746,"Os10g0491100",-1.0322055,{"$nulls":29},"NLP4","OsNLP4, NLP4.1, NLP4.2","NIN-LIKE PROTEIN 4","NLP transcription factor 4, NODULE INCEPTION-like protein 4, NIN-like protein 4",9," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010167 - response to nitrate, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0048364 - root development, GO:0009610 - response to symbiotic fungus, GO:0009620 - response to fungus, GO:0019740 - nitrogen utilization, GO:0060359 - response to ammonium ion, GO:0042594 - response to starvation, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000303 - cold tolerance, TO:0001019 - root to total biomass ratio, TO:0000442 - plant fresh weight, TO:0000578 - root fresh weight, TO:0001013 - lateral root number, TO:0001012 - lateral root length, TO:0000227 - root length, TO:0000084 - root number, TO:0000656 - root development trait, TO:0000571 - shoot fresh weight, TO:0000449 - grain yield per plant, TO:0000371 - yield trait","PO:0007022 - seed imbibition stage , PO:0007520 - root development stage , PO:0009005 - root ","Os09g0549450","LOC_Os09g37710.1, LOC_Os09g37710.2",{"$nulls":24},"RLCK45","OsRLCK45","RECEPTOR-LIKE CYTOPLASMIC KINASE 45","Receptor-like Cytoplasmic Kinase 45",1," Reproductive organ - panicle,  Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0789200","LOC_Os01g57940.1",{"$nulls":6},"RCS2","rcs2","CYSTEINE SYNTHASE 2","rice cysteine synthase (sulfer, nitrogen and light response)-2, rice cysteine synthase-2",6," Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0016740 - transferase activity, GO:0030170 - pyridoxal phosphate binding, GO:0004124 - cysteine synthase activity, GO:0006535 - cysteine biosynthetic process from serine","TO:0000075 - light sensitivity, TO:0000164 - stress trait","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os01g0557500","Os11g0586400",-1.5486903,0]
[{"$nulls":25},"Os03g0735200","Os03g0735200",-1.2091657,0,null,"Os09g0530000",2.832739,"Os03g0126900",-1.0316702,{"$nulls":29},"NRPD1A","OsNRPD1a","_NUCLEAR RNA POLYMERASE D1A","NUCLEAR RNA POLYMERASE D1a",4," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Reproductive organ - Panicle, Mode of branching","GO:0051607 - defense response to virus, GO:0030422 - production of siRNA involved in RNA interference, GO:0009615 - response to virus, GO:0006306 - DNA methylation, GO:0001618 - viral receptor activity","TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000547 - primary branch number, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000040 - panicle length",null,"Os04g0572600","LOC_Os04g48370.1",{"$nulls":24},"RLCK46","OsRLCK46, OsMRLK5, MRLK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 46","Receptor-like Cytoplasmic Kinase 46, malectin/malectin-like receptor-like kinase 5",1," Reproductive organ - panicle,  Seed","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0810600","LOC_Os01g59560.1",{"$nulls":6},"RCS3","rcs3, OsOASTL-A1, OASTL-A1","CYSTEINE SYNTHASE 3","rice cysteine synthase (sulfer, nitrogen and light response)-3, rice cysteine synthase-3, O-acetylserine(thiol) lyase A1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006535 - cysteine biosynthetic process from serine, GO:0016740 - transferase activity, GO:0030170 - pyridoxal phosphate binding, GO:0046685 - response to arsenic, GO:0005829 - cytosol, GO:0004124 - cysteine synthase activity, GO:0005737 - cytoplasm","TO:0000164 - stress trait, TO:0002673 - amino acid content, TO:0000075 - light sensitivity, TO:0000432 - temperature response trait","PO:0003011 - root vascular system , PO:0000258 - root cortex , PO:0020141 - stem node , PO:0009005 - root , PO:0000003 - whole plant , PO:0009011 - plant structure ","Os03g0747800","LOC_Os03g53650.4, LOC_Os03g53650.3, LOC_Os03g53650.1, LOC_Os03g53650.2",null,"Os05g0508500","Os10g0523700",-1.5532614,0]
[{"$nulls":25},"Os04g0514500","Os04g0514500",-1.8073698,0,null,"Os05g0370600",2.8318436,"Os08g0250700",-1.0307056,{"$nulls":29},"NRPD1B","OsNRPD1b","_",null,9," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Reproductive organ - Panicle, Mode of branching","GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0051607 - defense response to virus, GO:0009615 - response to virus, GO:0006306 - DNA methylation, GO:0030422 - production of siRNA involved in RNA interference","TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000547 - primary branch number, TO:0006032 - panicle size, TO:0000346 - tiller number",null,"Os09g0555200","LOC_Os09g38268.1",{"$nulls":24},"RLCK52","OsRLCK52","RECEPTOR-LIKE CYTOPLASMIC KINASE 52","Receptor-like Cytoplasmic Kinase 52",1," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004713 - protein tyrosine kinase activity","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0899000","LOC_Os01g67340.1, LOC_Os01g67340.2, LOC_Os01g67340.3",{"$nulls":6},"RCS4","rcs4","CYSTEINE SYNTHASE 4","rice cysteine synthase (sulfer, nitrogen and light response)-4, rice cysteine synthase-4",6," Tolerance and resistance - Stress tolerance","GO:0030170 - pyridoxal phosphate binding, GO:0004124 - cysteine synthase activity, GO:0006535 - cysteine biosynthetic process from serine, GO:0016740 - transferase activity, GO:0005737 - cytoplasm","TO:0000164 - stress trait, TO:0000075 - light sensitivity","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os04g0673700","Os05g0155100",-1.554184,0]
[{"$nulls":25},"Os04g0218100","Os04g0218100",-1.5125823,0,null,"Os05g0199700",2.8286688,"Os02g0122300",-1.0302063,{"$nulls":29},"ACE1","OsACE1, OsSIN, SIN","ACCELERATOR OF INTERNODE ELONGATION 1","SHORT INTERNODES",3," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009740 - gibberellic acid mediated signaling, GO:0030912 - response to deep water, GO:0009909 - regulation of flower development, GO:0051781 - positive regulation of cell division, GO:0080006 - internode patterning, GO:0009739 - response to gibberellin stimulus, GO:0009686 - gibberellin biosynthetic process","TO:0000237 - water stress trait, TO:0000207 - plant height, TO:0000145 - internode length, TO:0000068 - lodging incidence, TO:0000166 - gibberellic acid sensitivity, TO:0002675 - gibberellic acid content","PO:0007089 - stem elongation stage ","Os03g0346200","LOC_Os03g22510.1",{"$nulls":24},"RLCK57","OsRLCK57","RECEPTOR-LIKE CYTOPLASMIC KINASE 57","Receptor-like Cytoplasmic Kinase 57",1," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0032494 - response to peptidoglycan, GO:0050832 - defense response to fungus, GO:0010229 - inflorescence development, GO:0009742 - brassinosteroid mediated signaling, GO:0004674 - protein serine/threonine kinase activity, GO:0009741 - response to brassinosteroid stimulus, GO:0002237 - response to molecule of bacterial origin, GO:0010200 - response to chitin, GO:0009651 - response to salt stress","TO:0000050 - inflorescence branching, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000346 - tiller number, TO:0002677 - brassinosteroid sensitivity, TO:0000206 - leaf angle, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os01g0973500","LOC_Os01g74200.1",{"$nulls":6},"TS","TS","TEMPERATURE SENSITIVE",null,1," Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus",{"$nulls":5},"Os01g0714600","Os11g0621300",-1.5581948,0]
[{"$nulls":25},"Os05g0370000","Os05g0370000",-1.948011,0,null,"Os04g0430200",2.825072,"Os09g0570600",-1.0293239,{"$nulls":29},"TAC4","OsTAC4","TILLER ANGLE CONTROL 4","Tiller Angle Control 4",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0009630 - gravitropism, GO:0005634 - nucleus, GO:0009926 - auxin polar transport, GO:0009826 - unidimensional cell growth","TO:0000567 - tiller angle, TO:0000447 - filled grain number, TO:0000145 - internode length, TO:0000734 - grain length, TO:0000207 - plant height, TO:0002693 - gravity response trait, TO:0002672 - auxin content, TO:0000547 - primary branch number, TO:0000592 - 1000-dehulled grain weight, TO:0000557 - secondary branch number, TO:0000040 - panicle length","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0020142 - stem internode , PO:0008017 - leaf sheath pulvinus , PO:0020148 - shoot apical meristem , PO:0000232 - axillary bud meristem ","Os02g0450000","LOC_Os02g25230.1",{"$nulls":24},"RLCK60","OsRLCK60","RECEPTOR-LIKE CYTOPLASMIC KINASE 60","Receptor-like Cytoplasmic Kinase 60",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0118200","LOC_Os02g02600.1",{"$nulls":6},"GRH6","Grh6","GREEN RICE LEAFHOPPER RESISTANCE 6","Green rice leafhopper resistance-6",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure ",{"$nulls":3},"Os05g0421600","Os03g0839900",-1.5584296,0]
[{"$nulls":25},"Os09g0251500","Os09g0251500",2.0826101,0,null,"Os01g0343300",2.8214571,"Os03g0851300",-1.0287567,{"$nulls":29},"SYF2","OsSYF2","SYNTHETIC LETHAL WITH CDC FORTY 2","Synthetic lethal with cdc forty 2",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0006109 - regulation of carbohydrate metabolic process, GO:0001558 - regulation of cell growth, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0071014 - post-mRNA release spliceosomal complex, GO:0071013 - catalytic step 2 spliceosome, GO:0010229 - inflorescence development, GO:0010468 - regulation of gene expression, GO:0006397 - mRNA processing, GO:0080050 - regulation of seed development","TO:0000734 - grain length, TO:0000396 - grain yield, TO:0000050 - inflorescence branching, TO:0000040 - panicle length, TO:0000397 - grain size, TO:0000207 - plant height, TO:0002730 - grain shape","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os06g0711600","LOC_Os06g49740.2, LOC_Os06g49740.1",{"$nulls":24},"RLCK63","OsRLCK63","RECEPTOR-LIKE CYTOPLASMIC KINASE 63","Receptor-like Cytoplasmic Kinase 63",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0048316 - seed development, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0165100","LOC_Os02g06930.1, LOC_Os02g06930.2, LOC_Os02g06930.3, LOC_Os02g06930.4",{"$nulls":6},"MAPK4","OsMAPK4, OsMAP2, OsMSRMK3, OsMPK4, OsMPK7, MAP2, MSRMK3, MPK4, MPK7, MAPK7, OsMAPK7","MITOGEN-ACTIVATED PROTEIN KINASE 4","Mitogen-activated protein kinase 4, MAP kinase 4, Multiple stress-responsive MAP kinase 3",6," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004707 - MAP kinase activity, GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0006950 - response to stress, GO:2000033 - regulation of seed dormancy, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0009737 - response to abscisic acid stimulus, GO:0009611 - response to wounding, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009723 - response to ethylene stimulus, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009411 - response to UV","TO:0000173 - ethylene sensitivity, TO:0000424 - brown planthopper resistance, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000160 - UV light sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000253 - seed dormancy",null,"Os06g0699400","LOC_Os06g48590.2, LOC_Os06g48590.1",null,"Os05g0461900","Os08g0101500",-1.5595416,0]
[{"$nulls":25},"Os06g0258000","Os06g0258000",1.0646878,0,null,"Os04g0161100",2.8174725,"Os03g0669000",-1.0285134,{"$nulls":29},"KEAP1","OsKEAP1","KELCH-LIKE ECH-ASSOCIATED PROTEIN 1","Kelch-like ECH-associated protein 1",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0051775 - response to redox state, GO:0009845 - seed germination, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000440 - grain number per plant, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000437 - male sterility, TO:0000615 - abscisic acid sensitivity, TO:0002730 - grain shape, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000430 - germination rate","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage ","Os01g0162500","LOC_Os01g06890.1",{"$nulls":24},"RLCK79","OsRLCK79","RECEPTOR-LIKE CYTOPLASMIC KINASE 79","Receptor-like Cytoplasmic Kinase 79",2," Reproductive organ - panicle,  Seed","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0648100","LOC_Os02g43290.1",{"$nulls":6},"PITQ5","Pitq5*, Pi-tq5, Pi-tq5, Pitq-5, Pitq5","PYRICULARIA ORYZAE RESISTANCE TQ 5","Magnaporthe grisea resistance from Teqing, Blast resistance tq5",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",{"$nulls":3},"Os01g0966700","Os02g0817700",-1.5615784,0]
[{"$nulls":25},"Os03g0241100","Os03g0241100",0.9791147,0,null,"Os08g0132700",2.8173077,"Os01g0120600",-1.028007,{"$nulls":29},"D14L2","OsD14L2","D14-LIKE 2","D14-like 2",5," Vegetative organ - Culm",{"$nulls":3},"Os05g0590300","LOC_Os05g51240.1",{"$nulls":24},"RLCK80","OsRLCK80","RECEPTOR-LIKE CYTOPLASMIC KINASE 80","Receptor-like Cytoplasmic Kinase 80",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0650500","LOC_Os02g43430.1",{"$nulls":6},"PIX","Pi-x(t), Pi-x1","PYRICULARIA ORYZAE RESISTANCE X","Magnaporthe grisea resistance, Blast resistance",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus",{"$nulls":5},"Os01g0160800","Os09g0544000",-1.5627986,0]
[{"$nulls":25},"Os02g0468800","Os02g0468800",-1.7439495,0,null,"Os09g0397800",2.817189,"Os07g0239400",-1.0277327,{"$nulls":29},"D14L3","OsD14L3","D14-LIKE 3","D14-like 3",1," Vegetative organ - Culm","GO:0016787 - hydrolase activity",null,null,"Os01g0595600","LOC_Os01g41240.1",{"$nulls":24},"RLCK82","OsRLCK82","RECEPTOR-LIKE CYTOPLASMIC KINASE 82","Receptor-like Cytoplasmic Kinase 82",2," Seed","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009010 - seed ","Os02g0670100","LOC_Os02g44920.1",{"$nulls":6},"ACS2","OsACS2, Os-ACS2","ACC SYNTHASE 2","ACC synthase 2, 1-aminocyclopropane-1-carboxylic acid synthase 2",4," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009612 - response to mechanical stimulus, GO:0009814 - defense response, incompatible interaction, GO:0046687 - response to chromate, GO:0046689 - response to mercury ion, GO:0009693 - ethylene biosynthetic process, GO:0002213 - defense response to insect, GO:0009734 - auxin mediated signaling pathway, GO:0042594 - response to starvation, GO:0009723 - response to ethylene stimulus, GO:0010446 - response to alkalinity, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0050832 - defense response to fungus, GO:0008631 - induction of apoptosis by oxidative stress, GO:0009611 - response to wounding, GO:0009733 - response to auxin stimulus","TO:0000148 - viral disease resistance, TO:0000255 - sheath blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000481 - alkali sensitivity, TO:0000227 - root length, TO:0000034 - chromium sensitivity, TO:0000074 - blast disease, TO:0001012 - lateral root length, TO:0000163 - auxin sensitivity, TO:0000576 - stem length, TO:0000386 - rice ragged stunt virus resistance","PO:0009005 - root , PO:0009006 - shoot system ","Os04g0578000","LOC_Os04g48850.1",null,"Os03g0821100","Os03g0798200",-1.5655116,0]
[{"$nulls":25},"Os01g0823700","Os01g0823700",1.7231493,0,null,"Os01g0192500",2.811927,"Os05g0520100",-1.0276631,{"$nulls":29},"CHZ1","OsChz1","Chaperone for H2A.Z-H2B 1","CHZ-domain protein 1",null," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0007623 - circadian rhythm, GO:0005634 - nucleus, GO:0006325 - chromatin organization, GO:0048586 - regulation of long-day photoperiodism, flowering, GO:0048587 - regulation of short-day photoperiodism, flowering","TO:0000397 - grain size, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000040 - panicle length","PO:0001083 - inflorescence development stage ","Os11g0544600","LOC_Os11g34190.1",{"$nulls":24},"RLCK85","OsRLCK85, OsER2, ER2","RECEPTOR-LIKE CYTOPLASMIC KINASE 85","Receptor-like Cytoplasmic Kinase 85, ERECTA 2, OsERECTA2",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009554 - megasporogenesis, GO:0001558 - regulation of cell growth, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0022414 - reproductive process, GO:0004674 - protein serine/threonine kinase activity, GO:0042127 - regulation of cell proliferation, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0048229 - gametophyte development, GO:0009553 - embryo sac development","TO:0006032 - panicle size, TO:0000455 - seed set percent, TO:0000358 - female sterility, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000180 - spikelet fertility, TO:0000207 - plant height","PO:0028003 - gametophyte development stage , PO:0020003 - plant ovule , PO:0007041 - inflorescence emergence stage , PO:0000084 - plant sperm cell , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0009029 - stamen , PO:0009051 - spikelet , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009047 - stem ","Os02g0777400","LOC_Os02g53720.1, LOC_Os02g53720.2",{"$nulls":6},"ACS4","OsACS4, OS-ACS4","ACC SYNTHASE 4","ACC synthase 4, 1-aminocyclopropane-1-carboxylic acid synthase 4",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009693 - ethylene biosynthetic process, GO:0009058 - biosynthetic process, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0030170 - pyridoxal phosphate binding, GO:0003824 - catalytic activity",null,"PO:0009005 - root , PO:0009006 - shoot system ","Os05g0319200","LOC_Os05g25490.1",null,"Os03g0325600","Os02g0745100",-1.5785723,0]
[{"$nulls":25},"Os03g0396200","Os03g0396200",1.5172753,0,null,"Os02g0231000",2.8081427,"Os03g0640100",-1.0269638,{"$nulls":29},"TTLL12","OsTTLL12","TUBULIN TYROSINE LIGASE-LIKE 12","tubulin tyrosine ligase-like 12 protein",3," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0000919 - cell plate formation, GO:0009635 - response to herbicide, GO:0000226 - microtubule cytoskeleton organization, GO:0007017 - microtubule-based process, GO:0016874 - ligase activity, GO:0005524 - ATP binding, GO:0048364 - root development, GO:0006464 - protein modification process, GO:0009826 - unidimensional cell growth","TO:0000656 - root development trait, TO:0000357 - growth and development trait, TO:0000567 - tiller angle, TO:0000207 - plant height, TO:0001007 - coleoptile length, TO:0000058 - herbicide sensitivity","PO:0007520 - root development stage ","Os03g0179000","LOC_Os03g08140.2, LOC_Os03g08140.1",{"$nulls":24},"RLCK86","OsRLCK86, PTK2, OsPTK2","RECEPTOR-LIKE CYTOPLASMIC KINASE 86","Receptor-like Cytoplasmic Kinase 86, Protein Tyrosine Kinase 2",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0006970 - response to osmotic stress, GO:0004674 - protein serine/threonine kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0030912 - response to deep water, GO:0009408 - response to heat, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding","TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000095 - osmotic response sensitivity, TO:0000653 - seed development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os02g0777800","LOC_Os02g53750.1, LOC_Os02g53750.2",{"$nulls":6},"ACS5","OsACS5, OS-ACS5, OsBphi008a","ACC SYNTHASE 5","ACC synthase 5, 1-aminocyclopropane-1-carboxylic acid synthase 5",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0010446 - response to alkalinity, GO:0016847 - 1-aminocyclopropane-1-carboxylate synthase activity, GO:0030170 - pyridoxal phosphate binding, GO:0009058 - biosynthetic process, GO:0009693 - ethylene biosynthetic process","TO:0000481 - alkali sensitivity","PO:0009005 - root , PO:0009006 - shoot system ","Os01g0192900","LOC_Os01g09700.1",null,"Os07g0249900","Os07g0249700",-1.5825682,0]
[{"$nulls":25},"Os08g0128000","Os08g0128000",6.663168,0,null,"Os04g0530500",2.808035,"Os01g0911200",-1.026611,{"$nulls":29},"RLR1","OsRLR1","RPM1-LIKE RESISTANCE GENE 1","RPM1-like resistance gene 1",10," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0009626 - plant-type hypersensitive response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0031349 - positive regulation of defense response, GO:0005524 - ATP binding","TO:0000040 - panicle length, TO:0000112 - disease resistance, TO:0002759 - grain number, TO:0000357 - growth and development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os10g0163040","LOC_Os10g07978.2, LOC_Os10g07978.1",{"$nulls":24},"RLCK90","OsRLCK90","RECEPTOR-LIKE CYTOPLASMIC KINASE 90","Receptor-like Cytoplasmic Kinase 90",2," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os02g0821400","LOC_Os02g57560.1",{"$nulls":6},"ALDH2B","OsALDH2B","ALDEHYDE DEHYDROGENASE 2B","aldehyde dehydrogenase 2B",null," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors","TO:0000286 - submergence sensitivity",{"$nulls":4},"Os04g0423700","Os11g0642800",-1.5879403,0]
[{"$nulls":25},"Os02g0680700","Os02g0680700",-1.1112238,0,null,"Os07g0572400",2.8061712,"Os03g0657100",-1.0264767,{"$nulls":29},"RIP11.2","OsjRIP11.2, nuRIP, OsnuRIP","RIBOSOME-INACTIVATING PROTEIN 11.2","Ribosome-inactivating protein 11.2",11," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0005737 - cytoplasm, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0005829 - cytosol","TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000457 - total biomass yield, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000227 - root length, TO:0000576 - stem length",null,"Os11g0164000","LOC_Os11g06460.1",{"$nulls":24},"RLCK98","OsRLCK98, OsBSK1, BSK1, OsBSK1-1, BSK1-1","RECEPTOR-LIKE CYTOPLASMIC KINASE 98","Receptor-like Cytoplasmic Kinase 98, BR-signaling kinase 1, brassinosteroid-signaling kinase 1, brassinosteroid-SIGNALING KINASE 1-1",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0132800","LOC_Os03g04050.1",{"$nulls":6},"AMY3D","Amy3D/E*(RAmy3D/E), alpha Amy3, AmyII-4, AMY1.3, Amy3D, Amy3D/E*, RAmy3D/E, Amy3D_E, Amy8, aAmy3, RAmy3D, OsAmy3D, alphaAmy3","ALPHA-AMYLASE 3D","Alpha-amylase3D, Alpha-amylase isozyme 3D precursor, Alpha-amylase isozyme 3D, Alpha-amylase-3D, Amylase-8",8," Biochemical character,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009413 - response to flooding, GO:0009873 - ethylene mediated signaling pathway, GO:0033500 - carbohydrate homeostasis, GO:0045927 - positive regulation of growth, GO:0004556 - alpha-amylase activity, GO:0005509 - calcium ion binding, GO:0005983 - starch catabolic process, GO:0005987 - sucrose catabolic process, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0009723 - response to ethylene stimulus, GO:0009408 - response to heat","TO:0000253 - seed dormancy, TO:0000432 - temperature response trait, TO:0000168 - abiotic stress trait, TO:0000280 - seedling vigor, TO:0000173 - ethylene sensitivity, TO:0000259 - heat tolerance, TO:0000114 - flooding related trait, TO:0000449 - grain yield per plant",null,"Os08g0473900","LOC_Os08g36910.3, LOC_Os08g36910.2, LOC_Os08g36910.1",null,"Os08g0525600","Os03g0689300",-1.6003475,0]
[{"$nulls":25},"Os06g0105800","Os06g0105800",-1.3170387,0,null,"Os12g0488300",2.8028762,"Os06g0693700",-1.0264645,{"$nulls":29},"VST1","OsVST1","VAP-RELATED SUPPRESSOR OF TOO MANY MOUTHS 1",null,8," Vegetative organ - Culm,  Vegetative organ - Root","GO:0005789 - endoplasmic reticulum membrane, GO:0005886 - plasma membrane, GO:0009739 - response to gibberellin stimulus","TO:0000207 - plant height, TO:0000043 - root anatomy and morphology trait, TO:0002692 - root meristem development, TO:0000227 - root length",null,"Os08g0141300","LOC_Os08g04620.1",{"$nulls":24},"RLCK100","OsRLCK100","RECEPTOR-LIKE CYTOPLASMIC KINASE 100","Receptor-like Cytoplasmic Kinase 100",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0148700","LOC_Os03g05470.1",{"$nulls":6},"SPL7","OsSPL7","RICE SQUAMOSA PROMOTER-BINDING-LIKE 7","Squamosa promoter-binding-like protein 7",4," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Other","GO:0008270 - zinc ion binding, GO:0045449 - regulation of transcription, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0009740 - gibberellic acid mediated signaling, GO:0006350 - transcription","TO:0000329 - tillering ability, TO:0000050 - inflorescence branching, TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000371 - yield trait",null,"Os04g0551500","LOC_Os04g46580.1",null,"Os12g0268000","Os02g0570400",-1.6144248,0]
[{"$nulls":25},"Os10g0413700","Os10g0413700",-2.3695498,0,null,"Os02g0511600",2.8020542,"Os04g0444100",-1.0263926,{"$nulls":29},"APX9","OsAPX9","ASCORBATE PEROXIDASE 9","L-ascorbate peroxidase 9",9," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0034599 - cellular response to oxidative stress, GO:0009507 - chloroplast, GO:0020037 - heme binding, GO:0000302 - response to reactive oxygen species, GO:0042744 - hydrogen peroxide catabolic process, GO:0004601 - peroxidase activity","TO:0000207 - plant height, TO:0000371 - yield trait, TO:0000357 - growth and development trait",null,"Os09g0538600","LOC_Os09g36750.2, LOC_Os09g36750.1",{"$nulls":24},"RLCK102","OsRLCK102","RECEPTOR-LIKE CYTOPLASMIC KINASE 102","Receptor-like Cytoplasmic Kinase 102",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0170400","LOC_Os03g07430.1, LOC_Os03g07430.2, LOC_Os03g07430.3, LOC_Os03g07430.4, LOC_Os03g07430.5",{"$nulls":6},"SPL9","OsSPL9","RICE SQUAMOSA PROMOTER-BINDING-LIKE 9","Squamosa promoter-binding-like protein 9",5," Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0055070 - copper ion homeostasis, GO:0045449 - regulation of transcription, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os05g0408200","LOC_Os05g33810.1",null,"Os01g0950300","Os03g0741100",-1.6245098,0]
[{"$nulls":25},"Os02g0285900","Os02g0285900",-1.9363408,0,null,"Os04g0685200",2.8012345,"Os01g0149900",-1.0258819,{"$nulls":29},"_",null,"_","dehydrogenase-phosphopantetheinyl transferase",8," Biochemical character,  Vegetative organ - Culm","GO:0019878 - lysine biosynthetic process via aminoadipic acid, GO:0005829 - cytosol, GO:0000287 - magnesium ion binding, GO:0008897 - holo-[acyl-carrier-protein] synthase activity","TO:0000145 - internode length",null,"Os08g0243100","LOC_Os08g14490.1",{"$nulls":24},"RLCK108","OsRLCK108","RECEPTOR-LIKE CYTOPLASMIC KINASE 108","Receptor-like Cytoplasmic Kinase 108",3," Reproductive organ - panicle,  Seed","GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0283900","LOC_Os03g17550.1",{"$nulls":6},"SST","OsSPL10, SPL10, OsSST, SST/OsSPL10","SEEDLING SALT TOLERANT","Squamosa promoter-binding-like protein 10, seedling salt tolerant",6," Tolerance and resistance - Stress tolerance,  Other","GO:0045449 - regulation of transcription, GO:0008270 - zinc ion binding, GO:0003677 - DNA binding, GO:0009651 - response to salt stress, GO:0006350 - transcription, GO:0005634 - nucleus","TO:0006001 - salt tolerance, TO:0000608 - sodium content, TO:0000513 - potassium concentration, TO:0000526 - sodium concentration, TO:0000609 - potassium content",null,"Os06g0659100","LOC_Os06g44860.1",null,"Os06g0623600","Os10g0329300",-1.6259207,0]
[{"$nulls":25},"Os11g0163500","Os11g0163500",-1.2412925,0,null,"Os02g0586900",2.7975466,"Os12g0210400",-1.025217,{"$nulls":29},"LA2 ","OsLA2","LAZY2","LAZY 2",2," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0010581 - regulation of starch biosynthetic process, GO:0009629 - response to gravity, GO:0009507 - chloroplast, GO:0009590 - detection of gravity, GO:0009630 - gravitropism","TO:0002693 - gravity response trait, TO:0000567 - tiller angle",null,"Os02g0180200","LOC_Os02g08380.1",{"$nulls":24},"BBS1","OsRLCK109, RLCK109, OsBBS1, OSBBS1/OsRLCK109, PTK4, PTK4/BBS1, OsPTK4","BILATERAL BLADE SENESCENCE 1","Receptor-like Cytoplasmic Kinase 109, bilateral blade senescence 1, Protein Tyrosine Kinase 4",3," Vegetative organ - Leaf,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010229 - inflorescence development, GO:0006970 - response to osmotic stress, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0045492 - xylan biosynthetic process, GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0009658 - chloroplast organization, GO:0009414 - response to water deprivation, GO:0010413 - glucuronoxylan metabolic process, GO:0010150 - leaf senescence","TO:0000397 - grain size, TO:0000227 - root length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000095 - osmotic response sensitivity, TO:0000524 - submergence tolerance, TO:0000259 - heat tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000249 - leaf senescence, TO:0001007 - coleoptile length, TO:0000298 - chlorophyll ratio, TO:0000495 - chlorophyll content, TO:0000180 - spikelet fertility","PO:0007632 - seed maturation stage , PO:0007010 - whole plant fruit ripening stage , PO:0020103 - flag leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0001083 - inflorescence development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf , PO:0001170 - seed development stage ","Os03g0364400","LOC_Os03g24930.1, LOC_Os03g24930.2",{"$nulls":6},"SPL12","OsSPL12, DLN176, OsDLN176","RICE SQUAMOSA PROMOTER-BINDING-LIKE 12","Squamosa promoter-binding-like protein 12, SQUAMOSA Promoter-Binding Protein-Like 12a, DLN repressor 176, DLN motif protein 176",6," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0007623 - circadian rhythm, GO:0010378 - temperature compensation of the circadian clock, GO:0045449 - regulation of transcription, GO:0003677 - DNA binding, GO:0009266 - response to temperature stimulus, GO:0048364 - root development","TO:0000656 - root development trait, TO:0000432 - temperature response trait","PO:0007520 - root development stage ","Os06g0703500","LOC_Os06g49010.6, LOC_Os06g49010.5, LOC_Os06g49010.4, LOC_Os06g49010.1, LOC_Os06g49010.2, LOC_Os06g49010.3",null,"Os09g0571400","Os03g0337800",-1.6260886,0]
[{"$nulls":25},"Os12g0163500","Os12g0163500",-1.3642788,0,null,"Os09g0500900",2.7962372,"Os04g0462900",-1.0250721,{"$nulls":29},"OSM1","OsOSM1","OSMOTIN 1","osmotin 1",12," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0005576 - extracellular region, GO:0050832 - defense response to fungus, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009753 - response to jasmonic acid stimulus, GO:0016020 - membrane, GO:0005886 - plasma membrane","TO:0000207 - plant height, TO:0000172 - jasmonic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000357 - growth and development trait","PO:0020104 - leaf sheath , PO:0009049 - inflorescence ","Os12g0569500","LOC_Os12g38170.1",{"$nulls":24},"RLCK110","OsRLCK110, PTK5, OsPTK5","RECEPTOR-LIKE CYTOPLASMIC KINASE 110","Receptor-like Cytoplasmic Kinase 110, Protein Tyrosine Kinase 5",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0407900","LOC_Os03g29410.1",{"$nulls":6},"WAK4","OsWAK4, OsRLCK32, RLCK32","WALL-ASSOCIATED KINASE GENE 4","Receptor-like Cytoplasmic Kinase 32",1," Biochemical character,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0048316 - seed development, GO:0042742 - defense response to bacterium","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease","PO:0001170 - seed development stage , PO:0009010 - seed ","Os01g0310800","LOC_Os01g20900.1, LOC_Os01g20900.2, LOC_Os01g20900.3, LOC_Os01g20900.4, LOC_Os01g20900.5, LOC_Os01g20900.6, LOC_Os01g20900.7",null,"Os08g0407600","Os07g0645400",-1.634759,0]
[{"$nulls":25},"Os04g0541100","Os04g0541100",2.4778144,0,null,"Os03g0117800",2.7936232,"Os03g0151700",-1.0246056,{"$nulls":29},"SCR8","OsSCR8","SHORT CROWN ROOT 8","Short Crown Root 8",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0009266 - response to temperature stimulus, GO:0009826 - unidimensional cell growth, GO:0008283 - cell proliferation, GO:0048367 - shoot development, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0010449 - root meristem growth, GO:0006952 - defense response, GO:0005524 - ATP binding, GO:0043531 - ADP binding, GO:0048364 - root development, GO:0048830 - adventitious root development","TO:0002685 - crown root number, TO:0000656 - root development trait, TO:0002692 - root meristem development, TO:0000303 - cold tolerance, TO:0000470 - vascular tissue related trait, TO:0000296 - vegetative vigor, TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000346 - tiller number, TO:0000734 - grain length, TO:0000432 - temperature response trait, TO:0000592 - 1000-dehulled grain weight, TO:0002668 - jasmonic acid content, TO:0000456 - spikelet number, TO:0000457 - total biomass yield, TO:0000654 - shoot development trait, TO:0000476 - growth hormone content","PO:0007520 - root development stage ","Os08g0246300","LOC_Os08g14850.1",{"$nulls":24},"RLCK120","OsRLCK120","RECEPTOR-LIKE CYTOPLASMIC KINASE 120","Receptor-like Cytoplasmic Kinase 120",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009627 - systemic acquired resistance, GO:0009697 - salicylic acid biosynthetic process, GO:0050832 - defense response to fungus, GO:0004683 - calmodulin-dependent protein kinase activity, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0825800","LOC_Os03g61060.1, LOC_Os03g61060.2",{"$nulls":6},"WAK14","OsWAK14","WALL-ASSOCIATED KINASE GENE 14",null,2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0030247 - polysaccharide binding, GO:0005509 - calcium ion binding, GO:0010200 - response to chitin, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease",null,"Os02g0632800","LOC_Os02g42150.2, LOC_Os02g42150.1",null,"Os09g0322000","Os06g0116600",-1.6504889,0]
[{"$nulls":25},"Os11g0116900","Os11g0116900",-1.8014976,0,null,"Os02g0656100",2.7890003,"Os11g0497000",-1.0245605,{"$nulls":29},"SDR7-6","OsSDR7-6","SHORT-CHAIN ALCOHOL DEHYDROGENASE/REDUCTASE 7-6","short-chain alcohol dehydrogenase/reductase 7-6",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0060548 - negative regulation of cell death, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0070265 - necrotic cell death, GO:0009416 - response to light stimulus, GO:0016491 - oxidoreductase activity, GO:0005783 - endoplasmic reticulum, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance, TO:0000075 - light sensitivity, TO:0000399 - grain thickness, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000605 - hydrogen peroxide content, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease",null,"Os07g0663900 ","LOC_Os07g46860.1",{"$nulls":24},"RLCK122","OsRLCK122, OsUSP20, USP20","RECEPTOR-LIKE CYTOPLASMIC KINASE 122","Receptor-like Cytoplasmic Kinase 122, universal stress protein 20",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0006950 - response to stress, GO:0009413 - response to flooding, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000524 - submergence tolerance, TO:0000653 - seed development trait","PO:0005052 - plant callus , PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0839900","LOC_Os03g62340.1",{"$nulls":6},"WAK20","OsWAK20","WALL-ASSOCIATED KINASE GENE 20",null,2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0030247 - polysaccharide binding",null,null,"Os02g0807800","LOC_Os02g56370.1",null,"Os02g0532800","Os04g0656100",-1.651204,0]
[{"$nulls":25},"Os03g0657400","Os03g0657400",-1.9587623,0,null,"Os02g0113200",2.7889576,"Os03g0213200",-1.0243396,{"$nulls":29},"FLO19","ptPDC-E1-alpha1, OsptPDC-E1-alpha1","FLOURY ENDOSPERM 19","floury endosperm19, Plastidic pyruvate dehydrogenase complex E1 component subunit Alpha1, plastid-localized pyruvate dehydrogenase complex E1 component subunit alpha1",4," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Storage substances,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0006086 - acetyl-CoA biosynthetic process from pyruvate, GO:0006096 - glycolysis, GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity, GO:0009507 - chloroplast, GO:0043231 - intracellular membrane-bounded organelle, GO:0019375 - galactolipid biosynthetic process, GO:0009660 - amyloplast organization, GO:0019252 - starch biosynthetic process, GO:0009960 - endosperm development, GO:0009536 - plastid","TO:0000397 - grain size, TO:0000449 - grain yield per plant, TO:0000396 - grain yield, TO:0000181 - seed weight, TO:0000391 - seed size, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000598 - protein content, TO:0000196 - amylose content, TO:0000696 - starch content, TO:0000399 - grain thickness, TO:0002658 - starch grain synthesis, TO:0000604 - fat and essential oil content, TO:0000487 - endosperm color, TO:0000104 - floury endosperm, TO:0000592 - 1000-dehulled grain weight","PO:0007633 - endosperm development stage , PO:0000003 - whole plant , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009049 - inflorescence ","Os04g0119400","LOC_Os04g02900.2, LOC_Os04g02900.1",{"$nulls":24},"RLCK151","OsRLCK151","RECEPTOR-LIKE CYTOPLASMIC KINASE 151","Receptor-like Cytoplasmic Kinase 151",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0430000","LOC_Os04g35080.1",{"$nulls":6},"WAK25","OsWAK25","WALL-ASSOCIATED KINASE GENE 25","Wall-Associated Kinase 25",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0030247 - polysaccharide binding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009751 - response to salicylic acid stimulus, GO:0009611 - response to wounding","TO:0000356 - brown spot disease resistance, TO:0000074 - blast disease, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000401 - plant growth hormone sensitivity",null,"Os03g0225700","LOC_Os03g12470.1",null,"Os01g0949900","Os02g0140300",-1.6587092,0]
[{"$nulls":25},"Os12g0116600","Os12g0116600",-1.1165165,0,null,"Os03g0667100",2.7861977,"Os06g0198800",-1.0240699,{"$nulls":29},"MFAP1","OsMFAP1","MICROFIBRILLAR-ASSOCIATED PROTEIN 1","microfibrillar-associated protein 1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0002237 - response to molecule of bacterial origin, GO:0052542 - callose deposition during defense response, GO:0002679 - respiratory burst during defense response, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin","TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000346 - tiller number, TO:0000371 - yield trait","PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0020142 - stem internode ","Os06g0335101","LOC_Os06g22850.2",{"$nulls":24},"RLCK152","OsRLCK152","RECEPTOR-LIKE CYTOPLASMIC KINASE 152","Receptor-like Cytoplasmic Kinase 152",4," Reproductive organ - panicle,  Seed","GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0004672 - protein kinase activity","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0490500","LOC_Os04g41310.1, LOC_Os04g41310.2",{"$nulls":6},"WAK32","OsWAK32","WALL-ASSOCIATED KINASE GENE 32",null,4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0051607 - defense response to virus","TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance",null,"Os04g0307500","LOC_Os04g24220.1, LOC_Os04g24220.2, LOC_Os04g24220.3",null,"Os11g0199200","Os12g0133100",-1.6610179,0]
[{"$nulls":25},"Os01g0182700","Os01g0182700",0.95771533,0,null,"Os03g0811200",2.7861183,"Os06g0591600",-1.0225843,{"$nulls":29},"PAGN1","OsPAGN1","PLANT ARCHITECTURE AND GRAIN NUMBER 1","PLANT ARCHITECTURE and GRAIN NUMBER 1",7," Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0009826 - unidimensional cell growth, GO:0009736 - cytokinin mediated signaling, GO:0044260 - cellular macromolecule metabolic process, GO:0044238 - primary metabolic process, GO:0048316 - seed development","TO:0002660 - cytokinin content, TO:0000396 - grain yield, TO:0000447 - filled grain number, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000653 - seed development trait, TO:0000357 - growth and development trait, TO:0002759 - grain number, TO:0000547 - primary branch number","PO:0025034 - leaf , PO:0009066 - anther , PO:0009047 - stem , PO:0001170 - seed development stage , PO:0007131 - seedling development stage , PO:0009005 - root ","Os07g0421800","LOC_Os07g23970.1",{"$nulls":24},"RLCK153","OsRLCK153","RECEPTOR-LIKE CYTOPLASMIC KINASE 153","Receptor-like Cytoplasmic Kinase 153",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0503600","LOC_Os04g42480.1",{"$nulls":6},"WAK36","OsWAK36, OsRLCK140, RLCK140","WALL-ASSOCIATED KINASE GENE 36","Receptor-like Cytoplasmic Kinase 140",4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0030247 - polysaccharide binding, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os04g0310400","LOC_Os04g24510.1",null,"Os12g0610600","Os11g0105400",-1.6673452,0]
[{"$nulls":25},"Os04g0545000","Os04g0545000",1.9589577,0,null,"Os06g0183700",2.7830086,"Os08g0374100",-1.0221735,{"$nulls":29},"RF1","OsRF1","RING FINGER PROTEIN 1","RING finger protein 1",9," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009788 - negative regulation of abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0005789 - endoplasmic reticulum membrane, GO:0008270 - zinc ion binding, GO:0044260 - cellular macromolecule metabolic process, GO:0044238 - primary metabolic process","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000253 - seed dormancy, TO:0002667 - abscisic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000391 - seed size, TO:0000207 - plant height, TO:0000136 - relative water content",null,"Os09g0478600","LOC_Os09g30160.1",{"$nulls":24},"RLCK154","OsRLCK154, STRK1, OsSTRK1","RECEPTOR-LIKE CYTOPLASMIC KINASE 154","Receptor-like Cytoplasmic Kinase 154, salt tolerance receptor-like cytoplasmic kinase 1",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0005886 - plasma membrane, GO:0006979 - response to oxidative stress, GO:0042542 - response to hydrogen peroxide, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000605 - hydrogen peroxide content, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0540900","LOC_Os04g45730.1",{"$nulls":6},"WAK45","OsWAK45, OsRLCK143, RLCK143","WALL-ASSOCIATED KINASE GENE 45","Receptor-like Cytoplasmic Kinase 143",4," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0030247 - polysaccharide binding, GO:0005524 - ATP binding, GO:0005509 - calcium ion binding, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0368800 ","LOC_Os04g30010.1",null,"Os05g0590000","Os06g0477600",-1.6702198,0]
[{"$nulls":25},"Os05g0565900","Os05g0565900",-1.2161306,0,null,"Os02g0781000",2.7800424,"Os01g0924800",-1.0217015,{"$nulls":29},"FBX267","OsFBX267","F-BOX PROTEIN 267",null,8," Vegetative organ - Culm,  Reproductive organ - Heading date","GO:0048573 - photoperiodism, flowering","TO:0000137 - days to heading, TO:0000207 - plant height, TO:0002616 - flowering time",null,"Os08g0194000","LOC_Os08g09460.1",{"$nulls":24},"RLCK155","OsRLCK155","RECEPTOR-LIKE CYTOPLASMIC KINASE 155","Receptor-like Cytoplasmic Kinase 155",4," Reproductive organ - panicle,  Seed","GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0543000","LOC_Os04g45920.1",{"$nulls":6},"WAK61","OsWAK61, OsRLCK195, RLCK195","WALL-ASSOCIATED KINASE GENE 61","Receptor-like Cytoplasmic Kinase 195",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0030247 - polysaccharide binding, GO:0016020 - membrane, GO:0006468 - protein amino acid phosphorylation, GO:0007166 - cell surface receptor linked signal transduction, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os06g0142500","LOC_Os06g05050.1",null,"Os07g0107800","Os03g0737200",-1.6777977,0]
[{"$nulls":25},"Os11g0117400","Os11g0117400",-1.458721,0,null,"Os03g0604401",2.7796323,"Os05g0110900",-1.02154,{"$nulls":29},"TAC3",null,"TILLER ANGLE CONTROL 3 ","Tiller Angle Control 3",3," Vegetative organ - Culm","GO:0010052 - guard cell differentiation","TO:0000567 - tiller angle","PO:0008039 - stem base ","Os03g0726700","LOC_Os03g51660.1",{"$nulls":24},"RLCK160","OsRLCK160, PTK6, OsPTK6","RECEPTOR-LIKE CYTOPLASMIC KINASE 160","Receptor-like Cytoplasmic Kinase 160, Protein Tyrosine Kinase 6",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0030912 - response to deep water, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000095 - osmotic response sensitivity, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000621 - inflorescence development trait, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait","PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os04g0619400","LOC_Os04g52840.1, LOC_Os04g52840.2",{"$nulls":6},"WAK71","OsWAK71, OsRLCK229, RLCK229","WALL-ASSOCIATED KINASE GENE 71","Receptor-like Cytoplasmic Kinase 229",7," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0004713 - protein tyrosine kinase activity, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease",null,"Os07g0493800 ","LOC_Os07g31190.1",null,"Os01g0114100","Os03g0820300",-1.6782855,0]
[{"$nulls":25},"Os08g0235800","Os08g0235800",1.4134728,0,null,"Os01g0100400",2.7763739,"Os07g0187400",-1.0209169,{"$nulls":29},"XOAT13","OsTBL1, TBL1, OsXOAT13","XYLAN O-ACETYLTRANSFERASE 13","trichome birefringence-like 1, xylan O-acetyltransferase 13",12," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0042545 - cell wall modification, GO:0016413 - O-acetyltransferase activity, GO:0016021 - integral to membrane, GO:0005794 - Golgi apparatus","TO:0000175 - bacterial blight disease resistance, TO:0000207 - plant height",null,"Os12g0106300","LOC_Os12g01560.1",{"$nulls":24},"RLCK162","OsRLCK162","RECEPTOR-LIKE CYTOPLASMIC KINASE 162","Receptor-like Cytoplasmic Kinase 162",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0048544 - recognition of pollen, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus","TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0631800","LOC_Os04g53994.1",{"$nulls":6},"WAK82","OsWAK82, OsRLCK274, RLCK274","WALL-ASSOCIATED KINASE GENE 82","Receptor-like Cytoplasmic Kinase 274",9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009607 - response to biotic stimulus, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000179 - biotic stress trait, TO:0000236 - crop damage resistance",null,"Os09g0471500","LOC_Os09g29540.1",null,"Os07g0160400","Os12g0168400",-1.6845994,0]
[{"$nulls":25},"Os01g0624700","Os01g0624700",1.3198913,0,null,"Os02g0137200",2.7745018,"Os03g0709200",-1.0200915,{"$nulls":29},"XOAT12","OsTBL2, TBL2, OsXOAT12","XYLAN O-ACETYLTRANSFERASE 12","trichome birefringence-like 2, xylan O-acetyltransferase 12",11," Biochemical character,  Vegetative organ - Culm","GO:0005794 - Golgi apparatus, GO:0016021 - integral to membrane, GO:0016413 - O-acetyltransferase activity, GO:0042545 - cell wall modification","TO:0000207 - plant height",null,"Os11g0107000","LOC_Os11g01570.1",{"$nulls":24},"RLCK163","OsRLCK163","RECEPTOR-LIKE CYTOPLASMIC KINASE 163","Receptor-like Cytoplasmic Kinase 163",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0048544 - recognition of pollen, GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0632100","LOC_Os04g53998.1",{"$nulls":6},"WAK90","OsWAK90","WALL-ASSOCIATED KINASE GENE 90",null,9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0010200 - response to chitin, GO:0030247 - polysaccharide binding, GO:0005509 - calcium ion binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease",null,"Os09g0561500","LOC_Os09g38840.1",null,"Os09g0560200","Os01g0118000",-1.6866621,0]
[{"$nulls":25},"Os05g0571200","Os05g0571200",2.9214642,0,null,"Os01g0968800",2.773338,"Os08g0290500",-1.0200449,{"$nulls":29},"_","GN2, GN2.1, GN2.2","_","grain number 2, GRAINS NUMBER 2",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Character as QTL - Yield and productivity",null,"TO:0002759 - grain number, TO:0000207 - plant height, TO:0000137 - days to heading",{"$nulls":27},"RLCK166","OsRLCK166","RECEPTOR-LIKE CYTOPLASMIC KINASE 166","Receptor-like Cytoplasmic Kinase 166",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0010229 - inflorescence development","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0634500","LOC_Os04g54190.1, LOC_Os04g54190.2, LOC_Os04g54190.3",{"$nulls":6},"DEES1","WAK91, OsWAK91, OsDEES1","DEFECT IN EARLY EMBRYO SAC1","WALL-ASSOCIATED KINASE GENE 91",9," Biochemical character,  Seed - Morphological traits - Embryo,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process, GO:0010200 - response to chitin, GO:0004674 - protein serine/threonine kinase activity, GO:0030247 - polysaccharide binding, GO:0005509 - calcium ion binding, GO:0005524 - ATP binding","TO:0000074 - blast disease",null,"Os09g0561600","LOC_Os09g38850.1",null,"Os05g0468800","Os03g0639300",-1.6878551,0]
[{"$nulls":25},"Os02g0652100","Os02g0652100",3.5550115,0,null,"Os03g0192500",2.7732341,"Os03g0651100",-1.0198601,{"$nulls":29},"_",null,"_","cytochrome c",1," Biochemical character,  Vegetative organ - Culm,  Character as QTL - Yield and productivity","GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen, GO:0046872 - metal ion binding, GO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c, GO:0020037 - heme binding, GO:0009055 - electron carrier activity, GO:0005758 - mitochondrial intermembrane space","TO:0000346 - tiller number, TO:0000207 - plant height",null,"Os01g0885000 ","LOC_Os01g66180.1, LOC_Os01g66180.2",{"$nulls":24},"RLCK168","OsRLCK168","RECEPTOR-LIKE CYTOPLASMIC KINASE 168","Receptor-like Cytoplasmic Kinase 168",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0655300","LOC_Os04g56110.1, LOC_Os04g56110.2, LOC_Os04g56110.3",{"$nulls":6},"WAK92","OsWAK92, OsDEES1-L4","WALL-ASSOCIATED KINASE GENE 92",null,9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0030247 - polysaccharide binding, GO:0005509 - calcium ion binding, GO:0004674 - protein serine/threonine kinase activity, GO:0010200 - response to chitin, GO:0005524 - ATP binding","TO:0000074 - blast disease",null,"Os09g0562600","LOC_Os09g38910.1",null,"Os09g0385700","Os04g0493000",-1.6899577,0]
[{"$nulls":25},"Os01g0242500","Os01g0242500",-1.0357947,0,null,"Os09g0551600",2.7729027,"Os03g0735300",-1.0198506,{"$nulls":29},"_","OsMPH1, MPH1, OsMYB45, MYB45, DLN171, OsDLN171, OsMYB-R1, MYB-R1","_","MYB-like gene of Plant Height 1, transcription factor OsMYB45, MYB protein 45, DLN repressor 171, DLN motif protein 171",6," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0009826 - unidimensional cell growth, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0046686 - response to cadmium ion, GO:0003677 - DNA binding, GO:0005634 - nucleus","TO:0006032 - panicle size, TO:0000557 - secondary branch number, TO:0000547 - primary branch number, TO:0002616 - flowering time, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000396 - grain yield, TO:0000145 - internode length","PO:0025034 - leaf , PO:0020141 - stem node , PO:0009000 - pulvinus , PO:0020121 - lateral root , PO:0009029 - stamen ","Os06g0670300","LOC_Os06g45890.1",{"$nulls":24},"RLCK174","OsRLCK174","RECEPTOR-LIKE CYTOPLASMIC KINASE 174","Receptor-like Cytoplasmic Kinase 174",4," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0016021 - integral to membrane, GO:0048316 - seed development, GO:0050832 - defense response to fungus","TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os04g0685900","LOC_Os04g58910.1",{"$nulls":6},"GAD3","OsGAD3","GLUTAMATE DECARBOXYLASE","glutamate decarboxylase 3",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0030170 - pyridoxal phosphate binding, GO:0006536 - glutamate metabolic process, GO:0009409 - response to cold, GO:0004351 - glutamate decarboxylase activity","TO:0000303 - cold tolerance",null,"Os03g0236200","LOC_Os03g13300.1",null,"Os01g0696100","Os05g0576800",-1.691814,0]
[{"$nulls":25},"Os04g0562800","Os04g0562800",2.1577773,0,null,"Os12g0113600",2.772457,"Os07g0555400",-1.0195599,{"$nulls":29},"GWD1","OsGWD1","ALPHA-GLUCAN, WATER DIKINASE 1","\\alpha-glucan, water dikinase 1\\\", \\\"Glucan, Water-Dikinase 1\\\"\"",6," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits,  Seed - Physiological traits - Taste,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Germination","GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010030 - positive regulation of seed germination, GO:0005524 - ATP binding, GO:0016301 - kinase activity, GO:0005983 - starch catabolic process","TO:0000379 - cool paste viscosity, TO:0000592 - 1000-dehulled grain weight, TO:0000207 - plant height, TO:0000412 - setback viscosity, TO:0000374 - breakdown viscosity, TO:0002661 - seed maturation, TO:0000408 - hot paste viscosity, TO:0000409 - peak viscosity, TO:0000734 - grain length, TO:0000696 - starch content, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000266 - chalky endosperm, TO:0002730 - grain shape, TO:0000162 - seed quality, TO:0000371 - yield trait, TO:0000462 - gelatinization temperature, TO:0000449 - grain yield per plant","PO:0007057 - 0 seed germination stage , PO:0025034 - leaf ","Os06g0498400 ","LOC_Os06g30310.1",{"$nulls":24},"RLCK175","OsRLCK175","RECEPTOR-LIKE CYTOPLASMIC KINASE 175","Receptor-like Cytoplasmic Kinase 175",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development","TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0100700","LOC_Os05g01040.1, LOC_Os05g01040.2, LOC_Os05g01040.3, LOC_Os05g01040.4",{"$nulls":6},"SALT1","SALT1","SALT TOLERANCE 1",null,null," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress",{"$nulls":5},"Os08g0539700","Os02g0168100",-1.6955171,0]
[{"$nulls":25},"Os10g0562700","Os10g0562700",1.1526028,0,null,"Os09g0353700",2.771888,"Os01g0900900",-1.0183516,{"$nulls":29},"GLYR2","OsGLYR2, OsGR2, GR2","GLYOXYLATE/SUCCINIC SEMIALDEHYDE REDUCTASE 2","glyoxylate/succinic semialdehyde reductase 2, glyoxylate reductase 2",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0051287 - NAD or NADH binding, GO:0005739 - mitochondrion, GO:0009536 - plastid, GO:0010037 - response to carbon dioxide, GO:0009648 - photoperiodism, GO:0046487 - glyoxylate metabolic process, GO:0070402 - NADPH binding, GO:0030267 - glyoxylate reductase (NADP) activity, GO:0009570 - chloroplast stroma, GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity","TO:0000207 - plant height, TO:0000229 - photoperiod sensitivity",null,"Os01g0574600","LOC_Os01g39270.1",{"$nulls":24},"RLCK177","OsRLCK177","RECEPTOR-LIKE CYTOPLASMIC KINASE 177","Receptor-like Cytoplasmic Kinase 177",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0125300","LOC_Os05g03460.1",{"$nulls":6},"CCR1","OsCCR1","CINNAMOYL-COA REDUCTASE 1","OsCINNAMOYL-COENZYME A REDUCTASE1, CINNAMOYL-COENZYME A REDUCTASE 1, CINNAMOYL-CoA REDUCTASE 1",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016621 - cinnamoyl-CoA reductase activity, GO:0003824 - catalytic activity, GO:0009809 - lignin biosynthetic process, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009411 - response to UV, GO:0050662 - coenzyme binding, GO:0050832 - defense response to fungus","TO:0000160 - UV light sensitivity, TO:0000074 - blast disease, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance",null,"Os02g0808800 ","LOC_Os02g56460.1",null,"Os12g0615300","Os07g0637300",-1.6983052,0]
[{"$nulls":25},"Os02g0654600","Os02g0654600",1.6335889,0,null,"Os08g0160500",2.7714949,"Os03g0803000",-1.0174967,{"$nulls":29},"_","OsEXTL, EXTL","_","OsExtensin-like gene, Extensin-like gene",10," Vegetative organ - Culm","GO:0045488 - pectin metabolic process, GO:0052386 - cell wall thickening, GO:0009664 - plant-type cell wall organization, GO:0051510 - regulation of unidimensional cell growth, GO:0030243 - cellulose metabolic process","TO:0000051 - stem strength, TO:0000207 - plant height, TO:0000068 - lodging incidence",null,"Os10g0371000","LOC_Os10g22590.1",{"$nulls":24},"Z15","OsRLCK181, RLCK181, OsZ15","ZEBRA LEAF 15","Receptor-like Cytoplasmic Kinase 181, Zebra leaf 15",5," Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009658 - chloroplast organization, GO:0005886 - plasma membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0048316 - seed development","TO:0000175 - bacterial blight disease resistance, TO:0000653 - seed development trait, TO:0000303 - cold tolerance, TO:0000326 - leaf color, TO:0002715 - chloroplast development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0218400","LOC_Os05g12680.1",{"$nulls":6},"ADC1","OsADC1, ARGDC, ADC, OsAdc1","ARGININE DECARBODYLASE","Arginine decarboxylase, Arginine decarboxylase 1",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009446 - putrescine biosynthetic process, GO:0006979 - response to oxidative stress, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0048316 - seed development, GO:0009409 - response to cold, GO:0008792 - arginine decarboxylase activity, GO:0008295 - spermidine biosynthetic process, GO:0006596 - polyamine biosynthetic process, GO:0006527 - arginine catabolic process, GO:0000287 - magnesium ion binding, GO:0009651 - response to salt stress","TO:0000259 - heat tolerance, TO:0006001 - salt tolerance",null,"Os06g0131300","LOC_Os06g04070.1",null,"Os10g0431000","Os05g0367800",-1.7052273,0]
[{"$nulls":25},"Os01g0889400","Os01g0889400",-1.6627002,0,null,"Os02g0694100",2.7688332,"Os03g0794200",-1.0171695,{"$nulls":29},"WTG1","OTUB1, OsOTUB1, OsOTUB1.1, OsOTUB1.2, qNPT1, OsWTG1","WIDE AND THICK GRAIN 1","new plant type 1, OTU domain-containing ubiquitin aldehyde-binding protein 1, wide and thick grain 1, otubain 1",8," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0004843 - ubiquitin-specific protease activity, GO:0019784 - NEDD8-specific protease activity, GO:0005634 - nucleus, GO:0042127 - regulation of cell proliferation, GO:0071108 - protein K48-linked deubiquitination, GO:0043130 - ubiquitin binding","TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000382 - 1000-seed weight, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000397 - grain size, TO:0002730 - grain shape, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000051 - stem strength, TO:0000346 - tiller number","PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009010 - seed , PO:0009015 - portion of vascular tissue , PO:0020123 - root cap , PO:0020149 - quiescent center , PO:0006079 - shoot meristem ","Os08g0537800","LOC_Os08g42540.1, LOC_Os08g42540.2",{"$nulls":24},"RLCK186","OsRLCK186","RECEPTOR-LIKE CYTOPLASMIC KINASE 186","Receptor-like Cytoplasmic Kinase 186",5," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0005576 - extracellular region, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os05g0387700","LOC_Os05g32170.1",{"$nulls":6},"SUB1A","Sub1A, Sub1A-1, Sub1A-2, OsSUB1A","SUBMERGENCE 1A","submergence-1A",9," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0009873 - ethylene mediated signaling pathway, GO:0003700 - transcription factor activity, GO:0009413 - response to flooding, GO:0009723 - response to ethylene stimulus","TO:0000286 - submergence sensitivity, TO:0000114 - flooding related trait, TO:0000173 - ethylene sensitivity",{"$nulls":4},"Os01g0103100","Os01g0978400",-1.709232,0]
[{"$nulls":25},"Os01g0511000","Os01g0511000",-1.5616962,0,null,"Os01g0753500",2.7680786,"Os03g0139100",-1.0164894,{"$nulls":29},"PEX1","OsPEX1","POLLEN EXTENSIN 1","Extensin family protein, pollen extensin 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009809 - lignin biosynthetic process","TO:0000068 - lodging incidence, TO:0000051 - stem strength, TO:0000207 - plant height, TO:0000731 - lignin content",null,"Os11g0657400","LOC_Os11g43640.1",{"$nulls":24},"RLCK191","OsRLCK191","RECEPTOR-LIKE CYTOPLASMIC KINASE 191","Receptor-like Cytoplasmic Kinase 191",5," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0042742 - defense response to bacterium, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development","TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000068 - lodging incidence, TO:0000339 - stem thickness, TO:0000051 - stem strength","PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os05g0589700","LOC_Os05g51190.5, LOC_Os05g51190.4, LOC_Os05g51190.2, LOC_Os05g51190.3",{"$nulls":6},"SUB1B","Sub1B, OsERF#063, OsERF063, ERF063, OsERF63, ERF63, AP2/EREBP#166, AP2/EREBP166","SUBMERGENCE 1B","submergence-1B, ethylene response factor 63, APETALA2/ethylene-responsive element binding protein 166",9," Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0005634 - nucleus, GO:0009413 - response to flooding, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding","TO:0000173 - ethylene sensitivity",null,"Os09g0287000","LOC_Os09g11480.1, LOC_Os09g11480.2",null,"Os06g0253100","Os03g0790900",-1.7325583,0]
[{"$nulls":25},"Os01g0772100","Os01g0772100",-1.5608226,0,null,"Os06g0252100",2.7652206,"Os04g0454600",-1.0156736,{"$nulls":29},"_","OsINO80, INO80","_",null,3," Vegetative organ - Culm,  Reproductive organ - Heading date","GO:0009860 - pollen tube growth, GO:0003677 - DNA binding, GO:0006281 - DNA repair, GO:2000028 - regulation of photoperiodism, flowering, GO:0009846 - pollen germination, GO:0006338 - chromatin remodeling, GO:0016887 - ATPase activity, GO:0005524 - ATP binding, GO:0009845 - seed germination, GO:0048608 - reproductive structure development, GO:0031011 - Ino80 complex, GO:0051510 - regulation of unidimensional cell growth, GO:0006351 - transcription, DNA-dependent, GO:0010371 - regulation of gibberellin biosynthetic process","TO:0002616 - flowering time, TO:0000207 - plant height, TO:0002675 - gibberellic acid content","PO:0007057 - 0 seed germination stage ","Os03g0352500","LOC_Os03g22900.1",{"$nulls":24},"RLCK203","OsRLCK203, PTK8, OsPTK8","RECEPTOR-LIKE CYTOPLASMIC KINASE 203","Receptor-like Cytoplasmic Kinase 203, Protein Tyrosine Kinase 8",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0030912 - response to deep water, GO:0048316 - seed development, GO:0006970 - response to osmotic stress, GO:0010229 - inflorescence development, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus, GO:0009408 - response to heat","TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000653 - seed development trait, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait","PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os06g0202900","LOC_Os06g10160.1",{"$nulls":6},"SUB1C","Sub1C, OsERF#073, OsERF073, ERF073, OsERF73, ERF73, AP2/EREBP#122, AP2/EREBP122","SUBMERGENCE 1C","submergence-1C, ethylene response factor 73, APETALA2/ethylene-responsive element binding protein 122",9," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0009413 - response to flooding, GO:0005634 - nucleus, GO:0009723 - response to ethylene stimulus, GO:0003700 - transcription factor activity","TO:0000173 - ethylene sensitivity",null,"Os09g0286600 ","LOC_Os09g11460.1, LOC_Os09g11460.2",null,"Os03g0688300","Os05g0320700",-1.7367069,0]
[{"$nulls":25},"Os03g0445700","Os03g0445700",1.729031,0,null,"Os03g0769100",2.764268,"Os01g0974800",-1.0153565,{"$nulls":29},"SEC3A","OsSEC3A","EXOCYST SUBUNIT SEC3A","exocyst subunit SEC3A",3," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0060548 - negative regulation of cell death, GO:0005886 - plasma membrane, GO:0006893 - Golgi to plasma membrane transport, GO:0050832 - defense response to fungus, GO:0010730 - negative regulation of hydrogen peroxide biosynthetic process, GO:0006887 - exocytosis, GO:0051601 - exocyst localization, GO:0000145 - exocyst, GO:0005546 - phosphatidylinositol-4,5-bisphosphate binding, GO:0017049 - GTP-Rho binding","TO:0000592 - 1000-dehulled grain weight, TO:0000074 - blast disease, TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0000180 - spikelet fertility, TO:0000063 - mimic response, TO:0000040 - panicle length, TO:0000346 - tiller number",null,"Os03g0625700","LOC_Os03g42750.1, LOC_Os03g42750.2",{"$nulls":24},"RLCK204","OsRLCK204, OsER1, ER1","RECEPTOR-LIKE CYTOPLASMIC KINASE 204","Receptor-like Cytoplasmic Kinase 204, ERECTA 1, ERECTA1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016021 - integral to membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0048316 - seed development, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0042127 - regulation of cell proliferation, GO:0001558 - regulation of cell growth, GO:0009690 - cytokinin metabolic process, GO:0048281 - inflorescence morphogenesis, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress","TO:0000621 - inflorescence development trait, TO:0000456 - spikelet number, TO:0000259 - heat tolerance, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000734 - grain length, TO:0000397 - grain size, TO:0006032 - panicle size, TO:0002660 - cytokinin content, TO:0000072 - awn length, TO:0000207 - plant height","PO:0009047 - stem , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0009029 - stamen , PO:0009051 - spikelet , PO:0009049 - inflorescence , PO:0009010 - seed , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os06g0203800","LOC_Os06g10230.1",{"$nulls":6},"NBS1","OsNbs1","NIJIMEGEN BREAKAGE SYNDROME 1",null,null," Tolerance and resistance - Stress tolerance","GO:0006310 - DNA recombination, GO:0006281 - DNA repair",{"$nulls":5},"Os02g0620600","Os01g0977200",-1.739906,0]
[{"$nulls":25},"Os01g0825000","Os01g0825000",2.958329,0,null,"Os04g0649200",2.7603111,"Os05g0100300",-1.0148716,{"$nulls":29},"LIL1",null,"LIGHT-INDUCED LESION MIMIC MUTANT 1","light-induced lesion mimic mutant 1",7," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0009416 - response to light stimulus, GO:0043067 - regulation of programmed cell death","TO:0000075 - light sensitivity, TO:0000207 - plant height, TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response, TO:0000074 - blast disease",null,"Os07g0488400","LOC_Os07g30510.1",{"$nulls":24},"RLCK212","OsRLCK212","RECEPTOR-LIKE CYTOPLASMIC KINASE 212","Receptor-like Cytoplasmic Kinase 212",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0010229 - inflorescence development, GO:0042742 - defense response to bacterium, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0663900","LOC_Os06g45350.1, LOC_Os06g45350.2, LOC_Os06g45350.5",{"$nulls":6},"ZFP182","ZFP182/ZOS3-21, ZOS3-21","ZINC FINGER PROTEIN 182",null,3," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0008270 - zinc ion binding",null,null,"Os03g0823000","LOC_Os03g60810.1",null,"Os08g0564300","Os05g0119000",-1.7494441,0]
[{"$nulls":25},"Os12g0601400","Os12g0601400",3.5169733,0,null,"Os03g0187400",2.750969,"Os02g0506500",-1.0128212,{"$nulls":29},"THIS1",null,"HIGH TILLERING, REDUCED HEIGHT, AND INFERTILE SPIKELETS 1","\\high-tillering, reduced height with infertile spikelet 1\\\", \\\"high tillering, reduced height, and infertile spikelets 1\\\"\"",1," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility","GO:0009733 - response to auxin stimulus, GO:0010223 - secondary shoot formation, GO:0051302 - regulation of cell division, GO:0001558 - regulation of cell growth, GO:0006629 - lipid metabolic process, GO:0016787 - hydrolase activity, GO:0010152 - pollen maturation, GO:0009901 - anther dehiscence, GO:0009734 - auxin mediated signaling pathway, GO:0005737 - cytoplasm","TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000163 - auxin sensitivity, TO:0000421 - pollen fertility, TO:0000180 - spikelet fertility, TO:0000474 - glume opening",null,"Os01g0751600","LOC_Os01g54810.1",{"$nulls":24},"RLCK243","OsRLCK243","RECEPTOR-LIKE CYTOPLASMIC KINASE 243","Receptor-like Cytoplasmic Kinase 243",7," Seed,  Tolerance and resistance","GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0009611 - response to wounding","TO:0000653 - seed development trait","PO:0001170 - seed development stage , PO:0009010 - seed ","Os07g0695300","LOC_Os07g49470.1",{"$nulls":6},"CYP99A3","OsCYP99A3","P-450 99A3","Cytochrome P450 99A3",4," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004497 - monooxygenase activity, GO:0022900 - electron transport chain, GO:0009409 - response to cold, GO:0009411 - response to UV, GO:0009725 - response to hormone stimulus, GO:0016021 - integral to membrane, GO:0009055 - electron carrier activity, GO:0006952 - defense response, GO:0016020 - membrane, GO:0020037 - heme binding, GO:0055114 - oxidation reduction, GO:0051502 - diterpene phytoalexin biosynthetic process, GO:0009536 - plastid","TO:0000401 - plant growth hormone sensitivity, TO:0000303 - cold tolerance, TO:0000160 - UV light sensitivity, TO:0000207 - plant height, TO:0002675 - gibberellic acid content, TO:0002669 - diterpenoid phytoalexin content",null,"Os04g0178400","LOC_Os04g09920.1",null,"Os01g0951500","Os11g0116900",-1.8014976,0]
[{"$nulls":25},"Os01g0178500","Os01g0178500",1.7180201,0,null,"Os03g0173900",2.740303,"Os01g0858700",-1.0105339,{"$nulls":29},"GATA28","OsGATA28","GATA TRANSCRIPTION FACTOR 28","GATA transcription factor 28, GATA factor 28",11," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Other","GO:0006366 - transcription from RNA polymerase II promoter, GO:0008270 - zinc ion binding, GO:0030154 - cell differentiation, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:2000028 - regulation of photoperiodism, flowering, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0005667 - transcription factor complex","TO:0002616 - flowering time, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000137 - days to heading",null,"Os11g0187200 ","LOC_Os11g08410.1",{"$nulls":24},"RLCK298","OsRLCK298, PTK17, OsPTK17","RECEPTOR-LIKE CYTOPLASMIC KINASE 298","Receptor-like Cytoplasmic Kinase 298, Protein Tyrosine Kinase 17",10," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0000172 - jasmonic acid sensitivity","PO:0020103 - flag leaf , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0000025 - root tip , PO:0009005 - root , PO:0020033 - coleoptile , PO:0009049 - inflorescence , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed ","Os10g0395000","LOC_Os10g25550.1",{"$nulls":6},"DCL1","Dcl1, OsDCL1, osDCL1, Os-DCL1, OsDCL1a, DCL1a","DICER-LIKE 1","Dicer like 1, Dicer-like 1, Endoribonuclease Dicer homolog 1, Dicer-like protein 1",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0003725 - double-stranded RNA binding, GO:0035197 - siRNA binding, GO:0005634 - nucleus, GO:0004521 - endoribonuclease activity, GO:0035196 - production of miRNAs involved in gene silencing by miRNA, GO:0050832 - defense response to fungus, GO:0000287 - magnesium ion binding, GO:0004525 - ribonuclease III activity, GO:0052315 - phytoalexin biosynthetic process, GO:0005524 - ATP binding, GO:0004386 - helicase activity, GO:0031053 - primary microRNA processing, GO:0035198 - miRNA binding, GO:0048367 - shoot development, GO:0035195 - gene silencing by miRNA, GO:0007275 - multicellular organismal development, GO:0016442 - RNA-induced silencing complex, GO:0048830 - adventitious root development, GO:0030145 - manganese ion binding","TO:0000084 - root number, TO:0002671 - momilactone B content, TO:0000207 - plant height, TO:0000357 - growth and development trait, TO:0002670 - momilactone A content, TO:0000074 - blast disease, TO:0000326 - leaf color, TO:0000085 - leaf rolling","PO:0009049 - inflorescence ","Os03g0121800","LOC_Os03g02970.1",null,"Os02g0601800","Os01g0102900",-1.8219467,0]
[{"$nulls":25},"Os05g0392400","Os05g0392400",-1.5824146,0,null,"Os01g0583300",2.7331116,"Os01g0817000",-1.0063658,{"$nulls":29},"_","Sdt97","_",null,6," Biochemical character,  Vegetative organ - Culm","GO:0008725 - DNA-3-methyladenine glycosylase I activity, GO:0006284 - base-excision repair, GO:0009686 - gibberellin biosynthetic process","TO:0000207 - plant height",null,"Os06g0649800","LOC_Os06g44050.1",{"$nulls":24},"RLCK373","OsRLCK373","RECEPTOR-LIKE CYTOPLASMIC KINASE 373","Receptor-like Cytoplasmic Kinase 373",12," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0048316 - seed development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os12g0611100","LOC_Os12g41710.1, LOC_Os12g41710.2, LOC_Os12g41710.3, LOC_Os12g41710.4",{"$nulls":6},"PGIP4","Ospgip4, pgip4, OsPGIP4","POLYGALACTURONASE-INHIBITING PROTEIN 4","Polygalacturonase-inhibiting protein 4, polygalacturonase inhibiting protein 4",5," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0042742 - defense response to bacterium","TO:0000203 - bacterial leaf streak disease resistance, TO:0002668 - jasmonic acid content",null,"Os05g0104700","LOC_Os05g01444.1",null,"Os06g0250600","Os02g0813500",-1.842289,0]
[{"$nulls":25},"Os07g0598300","Os07g0598300",-2.7219422,0,null,"Os12g0538700",2.7271411,"Os06g0596300",-1.0043259,{"$nulls":29},"_",null,"_",null,10," Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Sterility","GO:0000967 - rRNA 5'-end processing","TO:0000207 - plant height, TO:0000485 - sterility related trait",null,"Os10g0555200  ","LOC_Os10g40650.1",{"$nulls":24},"_","Os_F0794, OsFBDUF48, FBDUF48, PEG3","_","paternally expressed gene 3",10," Seed - Morphological traits,  Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances,  Character as QTL - Yield and productivity",null,"TO:0000149 - seed width, TO:0000064 - embryo related trait, TO:0000696 - starch content, TO:0000382 - 1000-seed weight, TO:0000304 - seed thickness","PO:0009089 - endosperm ","Os10g0519800","LOC_Os10g37540.1",{"$nulls":6},"CAX1A","OsCAX1a, CAX1a, CAX1, OsCAX1, OsNCX2, OsNCX2.1, OsNCX2.2, NCX2, OsVCAX1a","Ca(2+)/H(+) EXCHANGER 1A","Vacuolar cation/proton exchanger 1a, Ca(2+)/H(+) exchanger 1a, cation/H+ exchanger 1a, cation/proton exchanger 1a, cation/H exchanger 1a, Na+/Ca2+ Exchanger 2, Sodium/Calcium exchanger 2",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding, GO:0016021 - integral to membrane, GO:0055073 - cadmium ion homeostasis, GO:0015691 - cadmium ion transport, GO:0015297 - antiporter activity, GO:0016036 - cellular response to phosphate starvation, GO:0005773 - vacuole, GO:0009411 - response to UV, GO:0006816 - calcium ion transport, GO:0051592 - response to calcium ion, GO:0008324 - cation transmembrane transporter activity, GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0005774 - vacuolar membrane, GO:0046686 - response to cadmium ion","TO:0006001 - salt tolerance, TO:0000102 - phosphorus sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000160 - UV light sensitivity","PO:0009051 - spikelet , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009005 - root ","Os01g0557500","LOC_Os01g37690.1, LOC_Os01g37690.2",null,"Os10g0530900","Os01g0141700",-1.8678088,0]
[{"$nulls":25},"Os07g0182900","Os07g0182900",2.5914161,0,null,"Os05g0402900",2.7227898,"Os05g0526600",-1.0025091,{"$nulls":29},"BC1L8","OsBC1L8","BRITTLE CULM-LIKE 8","BRITTLE CULM1-like 8",7," Vegetative organ - Culm","GO:0010215 - cellulose microfibril organization, GO:0016021 - integral to membrane, GO:0031225 - anchored to membrane",null,null,"Os07g0690900","LOC_Os07g49080.1",{"$nulls":24},"PGK2","OsPGK2, OsPGK2a, OsPGK2b, OsPGK2c, PKP","PHOSPHOGLYCERATE KINASE 2","\\phosphoglycerate kinase, cytosolic\\\", Phosphoglycerate kinase 2, phosphoglycerate kinase-2, Phosphoglycerate kinase protein\"",2," Biochemical character,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005524 - ATP binding, GO:0006096 - glycolysis, GO:0009415 - response to water, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0004618 - phosphoglycerate kinase activity, GO:0050801 - ion homeostasis","TO:0006002 - proline content, TO:0000495 - chlorophyll content, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000237 - water stress trait, TO:0000566 - stomatal frequency","PO:0007022 - seed imbibition stage ","Os02g0169300","LOC_Os02g07260.1, LOC_Os02g07260.2, LOC_Os02g07260.3",{"$nulls":6},"KSL10","OsKSL10, KS10, OsKS10, OsTPS33, TPS33","KAURENE SYNTHASE-LIKE 10","Ent-kaurene synthase 10, \\Ent-sandaracopimara-8(14), 15-diene synthase\\\", Ent-sandaracopimaradiene synthase, Ent-kaurene synthase-like 10, ent-sandaracopimaradiene synthase, ent-pimaradiene synthase, terpene synthase 33\"",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0000287 - magnesium ion binding, GO:0008152 - metabolic process, GO:0009899 - ent-kaurene synthase activity, GO:0006952 - defense response, GO:0034280 - ent-sandaracopimaradiene synthase activity, GO:0016829 - lyase activity, GO:0051501 - diterpene phytoalexin metabolic process",null,null,"Os12g0491800","LOC_Os12g30824.1, LOC_Os12g30824.2",null,"Os11g0216900","Os12g0210300",-1.9130135,0]
[{"$nulls":25},"Os12g0496900","Os12g0496900",-1.5206676,0,null,"Os03g0330200",2.7079754,"Os03g0360200",-1.0007015,{"$nulls":29},"BC1L7","OsBC1L7, OsPCS6, PCS6","BRITTLE CULM-LIKE 7","BRITTLE CULM1-like 7, Phytochelatin synthase 6",7," Vegetative organ - Culm","GO:0009664 - plant-type cell wall organization, GO:0052324 - cell wall cellulose biosynthetic process, GO:0046658 - anchored to plasma membrane, GO:0010215 - cellulose microfibril organization, GO:0009832 - plant-type cell wall biogenesis",null,"PO:0025034 - leaf ","Os07g0604400","LOC_Os07g41320.1",{"$nulls":24},"RLCK280","OsPUB52, PUB52, OsRLCK280, OsUSP33, USP33","RECEPTOR-LIKE CYTOPLASMIC KINASE 280","plant U-box-containing protein 52, U-box protein 52, Receptor-like Cytoplasmic Kinase 280, universal stress protein 33",9," Biochemical character,  Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009739 - response to gibberellin stimulus, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0009751 - response to salicylic acid stimulus, GO:0004674 - protein serine/threonine kinase activity, GO:0000151 - ubiquitin ligase complex, GO:0010229 - inflorescence development, GO:0009651 - response to salt stress, GO:0009611 - response to wounding, GO:0006950 - response to stress, GO:0004842 - ubiquitin-protein ligase activity, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0007623 - circadian rhythm","TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000615 - abscisic acid sensitivity, TO:0000507 - osmotic adjustment capacity, TO:0000276 - drought tolerance, TO:0000653 - seed development trait","PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0569800","LOC_Os09g39620.1",{"$nulls":6},"TIP1;1","OsTIP1;1, TIP1-1, rTIP1","TONOPLAST INTRINSIC PROTEIN 1;1","tonoplast intrinsic protein 1;1, Probable aquaporin TIP1-1, Tonoplast intrinsic protein 1-1, rice Tip 1, tonoplast intrinsic protein 1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0043674 - columella, GO:0030104 - water homeostasis, GO:0005215 - transporter activity, GO:0005773 - vacuole, GO:0006810 - transport, GO:0006950 - response to stress, GO:0042742 - defense response to bacterium, GO:0005774 - vacuolar membrane, GO:0009507 - chloroplast, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0016020 - membrane, GO:0005794 - Golgi apparatus, GO:0005783 - endoplasmic reticulum, GO:0006970 - response to osmotic stress","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity",null,"Os03g0146100","LOC_Os03g05290.1",null,"Os10g0416500","Os09g0563300",-1.9547302,0]
[{"$nulls":25},"Os07g0602200","Os07g0602200",-1.1587204,0,null,"Os07g0520800",2.696083,"Os03g0114950",-0.99781305,{"$nulls":29},"CYP94D11","OsCYP94D11, OsCYPq1, CYPq1","CYTOCHROME P450 94D11","Cytochrome P450 94D11",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0020037 - heme binding, GO:0009611 - response to wounding, GO:0009686 - gibberellin biosynthetic process, GO:0016021 - integral to membrane","TO:0000145 - internode length",null,"Os01g0803900","LOC_Os01g58970.1",{"$nulls":24},"PYL/RCAR10","OsPYL/RCAR10, PYL10, OsPYL10, OsPYL1, PYL1, R10, OsPYL/R10","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 10","pyrabactin resistance-like 10, PYR1-like 1, pyrabactin resistance 1-like 1",10," Seed - Physiological traits - Dormancy,  Character as QTL - Germination","GO:0009738 - abscisic acid mediated signaling, GO:0004872 - receptor activity, GO:0010427 - abscisic acid binding, GO:0048623 - seed germination on parent plant, GO:2000033 - regulation of seed dormancy, GO:0010029 - regulation of seed germination, GO:0045926 - negative regulation of growth, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0005737 - cytoplasm, GO:0042803 - protein homodimerization activity, GO:0004864 - phosphoprotein phosphatase inhibitor activity","TO:0000253 - seed dormancy","PO:0008039 - stem base , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os10g0573400","LOC_Os10g42280.1",{"$nulls":6},"PITP","Pi-tp(t), Pitp(t), Pi-tp","PYRICULARIA ORYZAE RESISTANCE TP","Pyricularia oryzae resistance-tp, Magnaporthe grisea resistance-tp",1," Tolerance and resistance - Insect resistance","GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf ",{"$nulls":3},"Os10g0550900","Os04g0627900",-1.9671141,0]
[{"$nulls":25},"Os04g0613800","Os04g0613800",-1.5274774,0,null,"Os10g0181200",2.6903121,"Os03g0808600",-0.9945205,{"$nulls":29},"RIP1.1","OsRIP1, RIP1, OsjRIP1.1","RIBOSOME-INACTIVATING PROTEIN 1.1","ribosome-inactivating protein 1, Ribosome-inactivating protein 1.1",1," Biochemical character,  Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0005737 - cytoplasm, GO:0045007 - depurination, GO:0000154 - rRNA modification, GO:0002213 - defense response to insect, GO:0009405 - pathogenesis, GO:0017148 - negative regulation of translation, GO:0006952 - defense response, GO:0030598 - rRNA N-glycosylase activity, GO:0005829 - cytosol, GO:0006970 - response to osmotic stress","TO:0000457 - total biomass yield, TO:0000424 - brown planthopper resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000227 - root length, TO:0000207 - plant height, TO:0000576 - stem length, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance",null,"Os01g0160800","LOC_Os01g06740.1",{"$nulls":24},"RLCK178","OsPti1a, OsRLCK178","RECEPTOR-LIKE CYTOPLASMIC KINASE 178","Pto-interacting protein 1a, Receptor-like Cytoplasmic Kinase 178",5," Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0031348 - negative regulation of defense response, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0009626 - plant-type hypersensitive response","TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000112 - disease resistance","PO:0001170 - seed development stage , PO:0009010 - seed ","Os05g0135800","LOC_Os05g04520.1",{"$nulls":6},"CAX3","OsCAX3, CAX6, OsNCX9, OsNCX9.1, OsNCX9.2, NCX9","Ca(2+)/H(+) EXCHANGER 3","Vacuolar cation/proton exchanger 3, Ca(2+)/H(+) exchanger 3, cation/H+ exchanger 3, Na+/Ca2+ Exchanger 9, Sodium/calcium exchanger 9",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008324 - cation transmembrane transporter activity, GO:0006816 - calcium ion transport, GO:0046686 - response to cadmium ion, GO:0015297 - antiporter activity, GO:0055085 - transmembrane transport, GO:0051592 - response to calcium ion, GO:0005773 - vacuole, GO:0005509 - calcium ion binding, GO:0009411 - response to UV, GO:0016021 - integral to membrane","TO:0000160 - UV light sensitivity","PO:0020127 - primary root , PO:0020121 - lateral root , PO:0025034 - leaf , PO:0009005 - root ","Os04g0653200","LOC_Os04g55940.1, LOC_Os04g55940.2",null,"Os01g0919400","Os05g0461900",-1.9979681,0]
[{"$nulls":25},"Os04g0691700","Os04g0691700",-0.95073175,0,null,"Os09g0517100",2.687106,"Os03g0628900",-0.9931574,{"$nulls":29},"SCM1",null,"STRONG CULM1","STRONG CULM 1",1," Vegetative organ - Culm",null,"TO:0000339 - stem thickness, TO:0000051 - stem strength",{"$nulls":27},"VTE2","OsVTE2, SGD1, OsSGD1, RTD1, OsRTD1, OsHPT, HPT","VITAMIN E DEFICIENT 2","VITAMIN E DEFICIENT 2, small grain and dwarf1, small grain and dwarf 1, Rice tocopherol de chancy 1, homogentisate phytyltransferase",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0033231 - carbohydrate export, GO:0006636 - unsaturated fatty acid biosynthetic process, GO:0006546 - glycine catabolic process, GO:0000096 - sulfur amino acid metabolic process, GO:0016021 - integral to membrane, GO:0019216 - regulation of lipid metabolic process, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0019748 - secondary metabolic process, GO:0009117 - nucleotide metabolic process, GO:0031347 - regulation of defense response, GO:0009535 - chloroplast thylakoid membrane, GO:0009416 - response to light stimulus, GO:0031408 - oxylipin biosynthetic process, GO:0009409 - response to cold, GO:0009507 - chloroplast, GO:0009739 - response to gibberellin stimulus, GO:0009106 - lipoate metabolic process, GO:0009740 - gibberellic acid mediated signaling, GO:0009266 - response to temperature stimulus, GO:0009108 - coenzyme biosynthetic process, GO:0006979 - response to oxidative stress, GO:0008652 - cellular amino acid biosynthetic process, GO:0009072 - aromatic amino acid family metabolic process, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0044272 - sulfur compound biosynthetic process, GO:0009826 - unidimensional cell growth, GO:0006733 - oxidoreduction coenzyme metabolic process, GO:0009965 - leaf morphogenesis, GO:0009695 - jasmonic acid biosynthetic process, GO:0010176 - homogentisate phytyltransferase activity, GO:0010189 - vitamin E biosynthetic process, GO:0015994 - chlorophyll metabolic process, GO:0009915 - phloem loading, GO:0030154 - cell differentiation","TO:0000340 - total soluble sugar content, TO:0002657 - oxidative stress, TO:0000435 - seed longevity, TO:0000152 - panicle number, TO:0000456 - spikelet number, TO:0000145 - internode length, TO:0002637 - leaf size, TO:0006032 - panicle size, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000346 - tiller number, TO:0000075 - light sensitivity, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000565 - spikelets per panicle length, TO:0000040 - panicle length, TO:0000166 - gibberellic acid sensitivity","PO:0006001 - phyllome ","Os06g0658900","LOC_Os06g44840.1, LOC_Os06g44840.2",{"$nulls":6},"GLP8-1","OsGLP8-1","GERMIN-LIKE PROTEIN 8-1","Germin-like protein 8-1",8," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Disease resistance","GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0030145 - manganese ion binding",null,null,"Os08g0188900","LOC_Os08g08920.1",null,"Os03g0848200","Os07g0249900",-2.08955,0]
[{"$nulls":25},"Os06g0584200","Os06g0584200",-1.985838,0,null,"Os04g0592400",2.680353,"Os02g0126800",-0.9907568,{"$nulls":29},"JMT1","OsJMT1","JASMONIC ACID CARBOXYL METHYLTRANSFERASE 1","Jasmonic acid carboxyl methyltransferase 1",5," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0032259 - methylation, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009723 - response to ethylene stimulus, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0010363 - regulation of plant-type hypersensitive response, GO:0042538 - hyperosmotic salinity response, GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0002213 - defense response to insect, GO:0008168 - methyltransferase activity, GO:0006612 - protein targeting to membrane, GO:0009620 - response to fungus, GO:0009695 - jasmonic acid biosynthetic process, GO:0009738 - abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance, TO:0002668 - jasmonic acid content, TO:0000357 - growth and development trait, TO:0000396 - grain yield, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000259 - heat tolerance",null,"Os05g0102000","LOC_Os05g01140.1",{"$nulls":24},"_","OsY14b, Y14b","_",null,3," Seed - Morphological traits - Embryo,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0000166 - nucleotide binding, GO:0003723 - RNA binding, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0006396 - RNA processing, GO:0009790 - embryonic development, GO:0009414 - response to water deprivation","TO:0000620 - embryo development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance",null,"Os03g0809900","LOC_Os03g59550.1",{"$nulls":6},"HKT4","OsHKT4, OsHKT1;1, HKT1;1, OsHKT2, RNC4, OsHKT1;1-FL, OsHKT1;1-V1, OsHKT1;1-V2, OsHKT1;1-V3, OsHKT1;1-V4, OsHKT1;1-V5, OsHKT1;1-V6, OsHKT1;1-V7, OsHKT1;1-V8","HIGH-AFFINITY K+ TRANSPORTER 4","High-affinity K+ Transporter 4, Root Na+ Content 4",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006814 - sodium ion transport, GO:0009414 - response to water deprivation, GO:0008324 - cation transmembrane transporter activity, GO:0055078 - sodium ion homeostasis, GO:0031402 - sodium ion binding, GO:0009651 - response to salt stress, GO:0006813 - potassium ion transport, GO:0030955 - potassium ion binding, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0015079 - potassium ion transmembrane transporter activity","TO:0000608 - sodium content, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009006 - shoot system ","Os04g0607500","LOC_Os04g51820.1, LOC_Os04g51820.3, LOC_Os04g51820.2",null,"Os01g0369700","Os09g0571400",-2.1200159,0]
[{"$nulls":25},"Os06g0309000","Os06g0309000",-1.3710469,0,null,"Os03g0775200",2.6794002,"Os04g0467800",-0.9895676,{"$nulls":29},"CEP6","OsCEP6, OsCEP6.1, CEP6.1, OsCEP13, CEP13","C-TERMINALLY ENCODED PEPTIDE 6","C-terminally encoded peptide 13",8," Vegetative organ - Culm,  Vegetative organ - Root,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009735 - response to cytokinin stimulus, GO:0080050 - regulation of seed development, GO:0048364 - root development, GO:0010229 - inflorescence development, GO:0048831 - regulation of shoot development, GO:0008361 - regulation of cell size, GO:0009414 - response to water deprivation, GO:0006995 - cellular response to nitrogen starvation, GO:0046686 - response to cadmium ion","TO:0000654 - shoot development trait, TO:0000402 - grain width, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000575 - endosperm related trait, TO:0000391 - seed size, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0000373 - inflorescence anatomy and morphology trait, TO:0000227 - root length, TO:0000207 - plant height, TO:0000382 - 1000-seed weight, TO:0000149 - seed width, TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity, TO:0000734 - grain length","PO:0009006 - shoot system , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0007089 - stem elongation stage ","Os08g0475500","LOC_Os08g37070.1",{"$nulls":24},"_","OsEnS-15, EnS-15","_","endosperm-specific gene 15",1," Seed - Physiological traits - Storage substances","GO:0045735 - nutrient reservoir activity",null,null,"Os01g0761800","LOC_Os01g55630.1",{"$nulls":6},"LTP2","nsLTP2, OsLTP2.3, Ltp2, OsLTP2, RLTP2, OsLtpII.3","LIPID TRANSFER PROTEIN 2","non-specific lipid-transfer protein 2, type-2 lipid transfer protein, Nonspecific Lipid Transfer Protein-2, lipid transfer protein-2",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0006869 - lipid transport, GO:0008289 - lipid binding, GO:0009409 - response to cold, GO:0009414 - response to water deprivation","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os03g0111300","LOC_Os03g02050.1",null,"Os01g0170600","Os02g0532800",-2.137474,0]
[{"$nulls":25},"Os05g0567400","Os05g0567400",-1.4745115,0,null,"Os05g0518200",2.6734562,"Os01g0150200",-0.98855084,{"$nulls":29},"RLCK85","OsRLCK85, OsER2, ER2","RECEPTOR-LIKE CYTOPLASMIC KINASE 85","Receptor-like Cytoplasmic Kinase 85, ERECTA 2, OsERECTA2",2," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009554 - megasporogenesis, GO:0001558 - regulation of cell growth, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0010229 - inflorescence development, GO:0022414 - reproductive process, GO:0004674 - protein serine/threonine kinase activity, GO:0042127 - regulation of cell proliferation, GO:0048316 - seed development, GO:0005524 - ATP binding, GO:0048229 - gametophyte development, GO:0009553 - embryo sac development","TO:0006032 - panicle size, TO:0000455 - seed set percent, TO:0000358 - female sterility, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000180 - spikelet fertility, TO:0000207 - plant height","PO:0028003 - gametophyte development stage , PO:0020003 - plant ovule , PO:0007041 - inflorescence emergence stage , PO:0000084 - plant sperm cell , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0009029 - stamen , PO:0009051 - spikelet , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009047 - stem ","Os02g0777400","LOC_Os02g53720.1, LOC_Os02g53720.2",{"$nulls":24},"_","OsEnS-56, pro10.2","_","endosperm-specific gene 56",3," Seed - Physiological traits - Storage substances","GO:0005783 - endoplasmic reticulum, GO:0042735 - protein body",null,"PO:0009089 - endosperm ","Os03g0766200","LOC_Os03g55734.1",{"$nulls":6},"HKT8","OsHKT8, Os-HKT1;5, OsHKT1;5, HKT1;5, SKC1, qSKC-1(t), OsSKC1","HIGH-AFFINITY K+ TRANSPORTER 8","shoot K+ concentration (QTL)-1(t)",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010233 - phloem transport, GO:0009753 - response to jasmonic acid stimulus, GO:0030955 - potassium ion binding, GO:0008324 - cation transmembrane transporter activity, GO:0055085 - transmembrane transport, GO:0006821 - chloride transport, GO:0006814 - sodium ion transport, GO:0006950 - response to stress, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0015079 - potassium ion transmembrane transporter activity, GO:0031402 - sodium ion binding, GO:0006813 - potassium ion transport, GO:0055075 - potassium ion homeostasis, GO:0055078 - sodium ion homeostasis, GO:0009651 - response to salt stress","TO:0000608 - sodium content, TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000525 - sodium to potassium content ratio","PO:0009006 - shoot system , PO:0025034 - leaf , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0005352 - xylem , PO:0005417 - phloem , PO:0005020 - vascular bundle ","Os01g0307500","LOC_Os01g20160.1",null,"Os03g0760200","Os05g0590000",-2.1804764,0]
[{"$nulls":25},"Os10g0431000","Os10g0431000",-2.2743814,0,null,"Os02g0684500",2.6695817,"Os03g0261900",-0.986502,{"$nulls":29},"CMF14","OsCCT41, CCT41, OsCMF14","CCT MOTIF FAMILY GENE 14","CCT domain-containing gene 41, CCT (CO, CO-LIKE and TOC1) domain protein 41, CCT domain protein 41, CCT MOTIF FAMILY (CMF) gene 14",12," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Spikelet, flower, glume, awn","GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0048576 - positive regulation of short-day photoperiodism, flowering","TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000456 - spikelet number",null,"Os12g0262400","LOC_Os12g16160.1",{"$nulls":24},"PAL1","OsPAL, Pal1*, Pal1, PAL, Pal_1, PalI, PAL2, OsPAL01, PAL01, OSPAL, CP-1, GP-1, OsPAL1, PAL3, OsPAL3","PHENYLALANINE AMMONIA-LYASE 1","phenylalanine ammonia-lyase, phenylalanine ammonia lyase 1, Phe ammonia lyase 1",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009697 - salicylic acid biosynthetic process, GO:0009411 - response to UV, GO:0009408 - response to heat, GO:0016211 - ammonia ligase activity, GO:0005737 - cytoplasm, GO:0006559 - L-phenylalanine catabolic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009834 - secondary cell wall biogenesis, GO:0010266 - response to vitamin B1, GO:0046688 - response to copper ion, GO:0009809 - lignin biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0009058 - biosynthetic process, GO:0009698 - phenylpropanoid metabolic process, GO:0009807 - lignan biosynthetic process, GO:0009753 - response to jasmonic acid stimulus, GO:0016841 - ammonia-lyase activity, GO:0002237 - response to molecule of bacterial origin, GO:0009642 - response to light intensity, GO:0009635 - response to herbicide, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0048316 - seed development","TO:0000021 - copper sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000051 - stem strength, TO:0000460 - light intensity sensitivity, TO:0000058 - herbicide sensitivity, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000731 - lignin content, TO:0000733 - lignin biosynthesis trait, TO:0000624 - allelopathic effect, TO:0000160 - UV light sensitivity, TO:0000031 - silicon sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000259 - heat tolerance, TO:0000326 - leaf color","PO:0001170 - seed development stage ","Os02g0626100","LOC_Os02g41630.2",{"$nulls":6},"LEA14","Lea14A, OsLEA5, OsEnS-2","LATE EMBRYOGENESIS ABUNDANT PROTEIN","late embryogenesis abundant protein 5, endosperm-specific gene 2",1," Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0009644 - response to high light intensity, GO:0009611 - response to wounding, GO:0009269 - response to desiccation",null,null,"Os01g0225600","LOC_Os01g12580.1",null,"Os09g0511600","Os01g0696100",-2.2594712,0]
[{"$nulls":25},"Os02g0593600","Os02g0593600",-2.9192822,0,null,"Os04g0105200",2.666277,"Os07g0112300",-0.9850855,{"$nulls":29},"PYL/RCAR5","OsPYL/RCAR5, PYL5, OsPYL5, OsPYL11, PYL11","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 5","pyrabactin resistance-like 5, PYR1-like 11, pyrabactin resistance 1-like 11",5," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010427 - abscisic acid binding, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0009845 - seed germination, GO:0009738 - abscisic acid mediated signaling, GO:0009724 - detection of abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0009414 - response to water deprivation, GO:0004864 - phosphoprotein phosphatase inhibitor activity","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000615 - abscisic acid sensitivity","PO:0025034 - leaf ","Os05g0213500","LOC_Os05g12260.1",{"$nulls":24},"SLG","OsSLG","SLENDER GRAIN","slender grain",8," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0010090 - trichome morphogenesis, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0010143 - cutin biosynthetic process, GO:0051179 - localization, GO:0010268 - brassinosteroid homeostasis, GO:0001558 - regulation of cell growth, GO:0010229 - inflorescence development, GO:0005829 - cytosol","TO:0000397 - grain size, TO:0000396 - grain yield, TO:0000734 - grain length, TO:0000206 - leaf angle, TO:0000590 - grain weight, TO:0002676 - brassinosteroid content, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0020141 - stem node , PO:0006327 - spikelet meristem , PO:0025127 - primordium , PO:0000229 - flower meristem , PO:0025477 - floral organ primordium , PO:0009038 - palea , PO:0009037 - lemma , PO:0000034 - vascular system ","Os08g0562500","LOC_Os08g44840.1",{"$nulls":6},"TPS2","OsTPS2","TREHALOSE-6-PHOSPHATE SYNTHASE 2",null,1," Biochemical character,  Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os01g0749400","LOC_Os01g54560.1, LOC_Os01g54560.2, LOC_Os01g54560.3",null,"Os12g0629700","Os06g0253100",-2.3089805,0]
[{"$nulls":25},"Os06g0671700","Os06g0671700",1.6465359,0,null,"Os05g0168800",2.6599038,"Os11g0220800",-0.9831174,{"$nulls":29},"RGG2","OsRGG2","RICE G PROTEIN GAMMA SUBUNIT 2","heterotrimeric G-protein gamma subunit 2, G protein gamma2 subunit, rice G protein gamma subunit 2, G protein gamma subunit 2, type B heterotrimeric G protein c subunit",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009737 - response to abscisic acid stimulus, GO:0048573 - photoperiodism, flowering, GO:0005834 - heterotrimeric G-protein complex, GO:0004871 - signal transducer activity, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009740 - gibberellic acid mediated signaling, GO:0030308 - negative regulation of cell growth, GO:0007186 - G-protein coupled receptor protein signaling pathway","TO:0000342 - panicle axis angle, TO:0000145 - internode length, TO:0000371 - yield trait, TO:0002730 - grain shape, TO:0000137 - days to heading, TO:0000303 - cold tolerance, TO:0000040 - panicle length, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000449 - grain yield per plant, TO:0000457 - total biomass yield, TO:0000592 - 1000-dehulled grain weight, TO:0000397 - grain size, TO:0000207 - plant height",null,"Os02g0137800 ","LOC_Os02g04520.1, LOC_Os02g04520.2",{"$nulls":41},"TPS6","OsTPS6","TREHALOSE-6-PHOSPHATE SYNTHASE 6",null,5," Biochemical character,  Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os05g0517200","LOC_Os05g44100.1",null,"Os11g0506800","Os07g0412100",-2.363206,0]
[{"$nulls":25},"Os02g0796400","Os02g0796400",-1.8115283,0,null,"Os04g0465900",2.6505616,"Os05g0120100",-0.9787833,{"$nulls":29},"RT","rt","ROOT GROWTH INHIBITION","root growth inhibition",null," Vegetative organ - Root","GO:0007275 - multicellular organismal development","TO:0000227 - root length, TO:0000084 - root number","PO:0009005 - root ",{"$nulls":43},"CESA8","OsCesA8, OsCESA8, OS_CESA08, CesA8","CELLULOSE SYNTHASE A8","Cellulose synthase A catalytic subunit 8 [UDP-forming], Cellulose synthase A catalytic subunit 8, CELLULOSE SYNTHASE8",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016760 - cellulose synthase (UDP-forming) activity, GO:0016021 - integral to membrane, GO:0030244 - cellulose biosynthetic process, GO:0008270 - zinc ion binding, GO:0009642 - response to light intensity, GO:0005886 - plasma membrane, GO:0007047 - cell wall organization","TO:0000460 - light intensity sensitivity",null,"Os07g0208500","LOC_Os07g10770.1",null,"Os03g0663500","Os02g0570500",-2.4463656,0]
[{"$nulls":25},"Os08g0205300","Os08g0205300",-1.3834237,0,null,"Os04g0666800",2.6462333,"Os01g0276100",-0.97771454,{"$nulls":29},"LRT2","CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2, Ppcti","LATERAL ROOTLESS2","cyclophilin2, cyclophilin 2, cyclophilin-2, cyclophilin 19-2, LATERAL ROOTLESS 2, lateral-rootless 2, REDUCED GROWTH OF LATERAL ROOTS, reduced growth of lateral roots, lateral root-2, Peptidyl-prolyl cis-trans isomerase",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0006457 - protein folding, GO:0009734 - auxin mediated signaling pathway, GO:0007275 - multicellular organismal development, GO:0009629 - response to gravity, GO:0004600 - cyclophilin, GO:0003755 - peptidyl-prolyl cis-trans isomerase activity, GO:0016018 - cyclosporin A binding, GO:0005886 - plasma membrane, GO:0009507 - chloroplast, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0015994 - chlorophyll metabolic process, GO:0042743 - hydrogen peroxide metabolic process, GO:0048527 - lateral root development, GO:0000413 - protein peptidyl-prolyl isomerization, GO:0009733 - response to auxin stimulus, GO:0048046 - apoplast, GO:0050801 - ion homeostasis","TO:0001013 - lateral root number, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0002693 - gravity response trait, TO:0000495 - chlorophyll content, TO:0000656 - root development trait, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance","PO:0009005 - root , PO:0007520 - root development stage ","Os02g0121300","LOC_Os02g02890.1",{"$nulls":41},"ACO4","OsACO4","AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 4","ACC oxidase 4",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, GO:0010446 - response to alkalinity","TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000481 - alkali sensitivity","PO:0009005 - root ","Os11g0186900","LOC_Os11g08380.1",null,"Os07g0418500","Os11g0124300",-2.5458815,0]
[{"$nulls":25},"Os08g0400000","Os08g0400000",2.076221,0,null,"Os12g0286200",2.6421096,"Os01g0264500",-0.97678536,{"$nulls":29},"LRT1","Lrt1*, Lrt1, Lrt 1","DEFICIENCY OF LATERAL ROOTS","Deficiency of lateral roots, Lateral root-1, LATERAL ROOT LESS1",null," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0007275 - multicellular organismal development, GO:0051301 - cell division, GO:0009629 - response to gravity, GO:0010311 - lateral root formation, GO:0009958 - positive gravitropism, GO:0009501 - amyloplast","TO:0000227 - root length, TO:0002693 - gravity response trait, TO:0000257 - root branching","PO:0009005 - root ",{"$nulls":43},"GA2OX8","OsGA2ox8","GIBBERELLIN 2-OXIDASE 8","gibberellin 2-beta-dioxygenase 8",5," Biochemical character,  Vegetative organ - Culm,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009845 - seed germination, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0016020 - membrane, GO:0048364 - root development, GO:0010336 - gibberellic acid homeostasis, GO:0045487 - gibberellin catabolic process, GO:0009739 - response to gibberellin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009962 - regulation of flavonoid biosynthetic process, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0010115 - regulation of abscisic acid biosynthetic process, GO:0009685 - gibberellin metabolic process","TO:0000615 - abscisic acid sensitivity, TO:0000340 - total soluble sugar content, TO:0000163 - auxin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0002675 - gibberellic acid content, TO:0000227 - root length, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress, TO:0000166 - gibberellic acid sensitivity, TO:0000152 - panicle number, TO:0000656 - root development trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000576 - stem length","PO:0007520 - root development stage , PO:0009006 - shoot system , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os05g0560900","LOC_Os05g48700.1",null,"Os10g0528300","Os06g0250600",-2.6102452,0]
[{"$nulls":25},"Os06g0661600","Os06g0661600",-1.014877,0,null,"Os03g0747700",2.6322281,"Os05g0461000",-0.9751541,{"$nulls":29},"IPT4","OsIPT4","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 4","adenosine phosphate isopentenyltransferase 4, isopentenyltransferase 4, ISOPENTENYL-TRANSFERASE 4",3," Biochemical character,  Vegetative organ - Root,  Character as QTL - Yield and productivity","GO:0009536 - plastid, GO:0005524 - ATP binding, GO:0009691 - cytokinin biosynthetic process, GO:0060359 - response to ammonium ion, GO:0008033 - tRNA processing, GO:0016740 - transferase activity, GO:0009824 - adenylate dimethylallyltransferase activity, GO:0009733 - response to auxin stimulus, GO:0010167 - response to nitrate","TO:0000456 - spikelet number, TO:0000163 - auxin sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009005 - root ","Os03g0810100 ","LOC_Os03g59570.1",{"$nulls":41},"RAD51A2","OsRad51A2, OsRAD51","DNA REPAIR PROTEIN RAD51A2 ",null,12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006281 - DNA repair, GO:0010332 - response to gamma radiation, GO:0008094 - DNA-dependent ATPase activity, GO:0006302 - double-strand break repair, GO:0005524 - ATP binding","TO:0000161 - radiation response trait",null,"Os12g0497300","LOC_Os12g31370.1",null,null,"Os10g0530900",-2.7402694,0]
[{"$nulls":25},"Os01g0877500","Os01g0877500",1.3875775,0,null,"Os01g0646300",2.6251109,"Os02g0786000",-0.9726057,{"$nulls":29},"SRT5","srt5","SHORT ROOT 5","short root5",null," Vegetative organ - Root","GO:0007275 - multicellular organismal development",{"$nulls":45},"SAUR27","OsSAUR27","SMALL AUXIN-UP RNA 27","Small auxin-up RNA 27, AUXIN-INDUCED PROTEIN 10A5",6," Tolerance and resistance - Stress tolerance","GO:0009415 - response to water","TO:0000237 - water stress trait",null,"Os06g0701900","LOC_Os06g48850.1",null,null,"Os07g0676900",-2.7899196,0]
[{"$nulls":25},"Os10g0466500","Os10g0466500",4.4661345,0,null,"Os02g0609700",2.615908,"Os04g0436100",-0.97047997,{"$nulls":29},"SPL12","OsSPL12, DLN176, OsDLN176","RICE SQUAMOSA PROMOTER-BINDING-LIKE 12","Squamosa promoter-binding-like protein 12, SQUAMOSA Promoter-Binding Protein-Like 12a, DLN repressor 176, DLN motif protein 176",6," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0006350 - transcription, GO:0005634 - nucleus, GO:0007623 - circadian rhythm, GO:0010378 - temperature compensation of the circadian clock, GO:0045449 - regulation of transcription, GO:0003677 - DNA binding, GO:0009266 - response to temperature stimulus, GO:0048364 - root development","TO:0000656 - root development trait, TO:0000432 - temperature response trait","PO:0007520 - root development stage ","Os06g0703500","LOC_Os06g49010.6, LOC_Os06g49010.5, LOC_Os06g49010.4, LOC_Os06g49010.1, LOC_Os06g49010.2, LOC_Os06g49010.3",{"$nulls":41},"MLO_","OsMLO5, OsMLO2","POWDERY-MILDEW-RESISTANCE GENE O_","powdery-MiLdew-resistance gene O5, powdery-MiLdew-resistance gene O2, Mildew resistance Locus O-2",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0050832 - defense response to fungus, GO:0009408 - response to heat, GO:0008219 - cell death","TO:0000259 - heat tolerance, TO:0000074 - blast disease","PO:0009046 - flower ","Os01g0888600","LOC_Os01g66510.1",null,null,"Os01g0839100",-2.8807304,0]
[{"$nulls":25},"Os01g0718000","Os01g0718000",-1.3273708,0,null,"Os03g0308700",2.6091053,"Os02g0105100",-0.9691979,{"$nulls":29},"PIP2;3","OsPIP2;3, PIP2-3, OsPIP2-2","PLASMA MEMBRANE INTRINSIC PROTEIN 2;3","Probable aquaporin PIP2-3, Plasma membrane intrinsic protein 2-3, aquaporin 2;3",4," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane, GO:0005215 - transporter activity, GO:0009414 - response to water deprivation, GO:0016020 - membrane, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress","TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0009005 - root ","Os04g0521100","LOC_Os04g44060.1",{"$nulls":41},"MLO_","OsMLO6, OsMLO1, OsMlo1, Mlo, OsMlo-1, Mlo1, MLO6","POWDERY-MILDEW-RESISTANCE GENE O_","powdery-MiLdew-resistance gene O6, powdery-MiLdew-resistance gene O1, Mildew resistance Locus O-6",6," Tolerance and resistance - Disease resistance","GO:0009607 - response to biotic stimulus, GO:0008219 - cell death, GO:0005516 - calmodulin binding, GO:0006952 - defense response, GO:0016021 - integral to membrane","TO:0000074 - blast disease","PO:0009066 - anther ","Os06g0486300","LOC_Os06g29110.1",null,null,"Os10g0389200",-2.9787807,0]
[{"$nulls":25},"Os06g0118000","Os06g0118000",3.897976,0,null,"Os11g0135000",2.602723,"Os03g0421700",-0.9626622,{"$nulls":29},"EXPA17","OsEXPA17, OsEXP17, osaEXPa1.31","ALPHA-EXPANSIN 17","expansin A17",6," Vegetative organ - Root","GO:0016020 - membrane, GO:0009664 - plant-type cell wall organization, GO:0005618 - cell wall, GO:0005576 - extracellular region","TO:0002665 - root hair length",null,"Os06g0108600 ","LOC_Os06g01920.1",{"$nulls":41},"WRKY107","OsWRKY107","WRKY GENE 107",null,1," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance",null,"Os01g0185900","LOC_Os01g09080.1",null,null,"Os01g0385400",-3.0720632,0]
[{"$nulls":25},"Os01g0595300","Os01g0595300",-1.1076736,0,null,"Os04g0523500",2.5959008,"Os02g0643800",-0.9625449,{"$nulls":29},"EXPA22","OsEXPA22, OsEXP22, osaEXPa1.9","ALPHA-EXPANSIN 22","expansin A22, Rice expansin-22, Expansin-A22, Alpha-expansin-22",2," Vegetative organ - Root","GO:0016020 - membrane, GO:0005576 - extracellular region, GO:0009664 - plant-type cell wall organization, GO:0005618 - cell wall",null,null,"Os02g0268600","LOC_Os02g16850.1",{"$nulls":41},"WRKY108","OsWRKY108","WRKY GENE 108",null,1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0009409 - response to cold, GO:0009753 - response to jasmonic acid stimulus","TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0821300","LOC_Os01g60600.1",null,null,"Os09g0532000",-3.135744,0]
[{"$nulls":25},"Os01g0141700","Os01g0141700",-1.8678088,0,null,"Os03g0637900",2.5889113,"Os05g0494500",-0.96053505,{"$nulls":29},"DHAR1","OsDHAR1, DHAR, cytDHAR, OscytDHAR, OsDHAR","DEHYDROASCORBATE REDUCTASE 1","DHAR class GLUTATHIONE S-TRANSFERASE 1, dehydroascorbate reductase, dehydroascorbate reductase 1, cytosolic dehydroascorbate reductase",5," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010043 - response to zinc ion, GO:0009414 - response to water deprivation, GO:0048830 - adventitious root development, GO:0005507 - copper ion binding, GO:0009610 - response to symbiotic fungus, GO:0019853 - L-ascorbic acid biosynthetic process, GO:0032929 - negative regulation of superoxide release, GO:0005739 - mitochondrion, GO:0046685 - response to arsenic, GO:0010731 - protein amino acid glutathionylation, GO:0043295 - glutathione binding, GO:0009742 - brassinosteroid mediated signaling, GO:0006979 - response to oxidative stress, GO:0005773 - vacuole, GO:0005777 - peroxisome, GO:0005886 - plasma membrane, GO:0009570 - chloroplast stroma, GO:0043903 - regulation of symbiosis, encompassing mutualism through parasitism, GO:0009753 - response to jasmonic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0048046 - apoplast, GO:0010193 - response to ozone, GO:0000302 - response to reactive oxygen species","TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0002657 - oxidative stress, TO:0000031 - silicon sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000396 - grain yield",null,"Os05g0116100","LOC_Os05g02530.1",{"$nulls":41},"WRKY82","OsWRKY82","WRKY GENE 82",null,5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009408 - response to heat, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance, TO:0000259 - heat tolerance",null,"Os05g0233100","LOC_Os05g14370.1",null,null,"Os08g0547900",-3.211737,0]
[{"$nulls":25},"Os11g0206200","Os11g0206200",-1.877407,0,null,"Os01g0788700",2.5842452,"Os09g0501850",-0.9592638,{"$nulls":29},"SAPK9","OsSAPK9, OsSnRK2.9, SnRK2.9","STRESS/ABA-ACTIVATED PROTEIN KINASE 9","stress/ABA-activated protein kinase 9, Stress-Activated Protein Kinase 9, Sucrose nonfermenting-1-related protein kinase 2.9",12," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009738 - abscisic acid mediated signaling, GO:0009651 - response to salt stress, GO:0019676 - ammonia assimilation cycle, GO:0048364 - root development, GO:0042742 - defense response to bacterium, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0004674 - protein serine/threonine kinase activity, GO:0010116 - positive regulation of abscisic acid biosynthetic process, GO:0009414 - response to water deprivation, GO:0009415 - response to water, GO:0005524 - ATP binding, GO:0009737 - response to abscisic acid stimulus, GO:0060359 - response to ammonium ion","TO:0000605 - hydrogen peroxide content, TO:0000656 - root development trait, TO:0000237 - water stress trait, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance","PO:0007520 - root development stage ","Os12g0586100","LOC_Os12g39630.1",{"$nulls":41},"WRKY123","OsWRKY123, DLN183, OsDLN183","WRKY GENE 123","DLN repressor 183, DLN motif protein 183",7," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance",null,"Os07g0273700","LOC_Os07g17230.1",null,null,"Os01g0170600",-3.4193773,0]
[{"$nulls":25},"Os11g0167300","Os11g0167300",-2.6815064,0,null,"Os02g0709000",2.57749,"Os02g0114700",-0.95523596,{"$nulls":29},"RRL1","rrl1(t), rrl1","REDUCED ROOT LENGTH 1","reduced root length1(t), reduced root length 1, reduced root length-1",null," Vegetative organ - Root","GO:0009826 - unidimensional cell growth, GO:0007275 - multicellular organismal development","TO:0000227 - root length","PO:0009005 - root ",{"$nulls":43},"WRKY112","OsWRKY112","WRKY GENE 112",null,9," Tolerance and resistance - Disease resistance","GO:0043565 - sequence-specific DNA binding, GO:0042742 - defense response to bacterium, GO:0006952 - defense response, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance",null,null,"LOC_Os09g09630",null,null,"Os07g0217600",-3.6866255,0]
[{"$nulls":25},"Os10g0204400","Os10g0204400",7.923153,0,null,"Os08g0124000",2.569206,"Os06g0168600",-0.95442486,{"$nulls":29},"qRPI-4-1(rpi4.1)","qRPI-4-1(rpi4.1)","root penetration index (QTL)-4-1","root penetration index (QTL)-4-1",4," Vegetative organ - Root",{"$nulls":46},"WRKY96","OsWRKY96","WRKY GENE 96",null,12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0043565 - sequence-specific DNA binding, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity, GO:0006952 - defense response, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000188 - drought sensitivity",null,"Os12g0507300","LOC_Os12g32250.1",null,null,"Os07g0601100",-3.763871,0]
[{"$nulls":25},"Os05g0402700","Os05g0402700",1.6210235,0,null,"Os09g0491100",2.5668914,"Os06g0143900",-0.9528351,{"$nulls":29},"qBRT-3-1(brt3.1)","qBRT-3-1(brt3.1)","basal root thickness (QTL)-3-1","basal root thickness (QTL)-3-1",3," Vegetative organ - Root",{"$nulls":46},"WRKY78","OsWRKY78","WRKY GENE 78",null,1," Tolerance and resistance - Disease resistance","GO:0003700 - transcription factor activity, GO:0042742 - defense response to bacterium, GO:0043565 - sequence-specific DNA binding, GO:0006952 - defense response","TO:0000175 - bacterial blight disease resistance",{"$nulls":5},"Os12g0629700",-3.9665215,0]
[{"$nulls":25},"Os03g0255500","Os03g0255500",-1.9026088,0,null,"Os09g0452400",2.5565217,"Os05g0557000",-0.94864494,{"$nulls":29},"qPRT-2-2(prt2.2)","qPRT-2-2(prt2.2)","penetrated root thickness (QTL)-2-2","penetrated root thickness (QTL)-2-2",2," Vegetative organ - Root",{"$nulls":46},"SAP11","OsDOG, OsSAP11, DOG","STRESS ASSOCIATED PROTEIN GENE 11","Oryza sativa dwarf rice with overexpression of gibberellin-induced gene, dwarf rice with overexpression of gibberellin-induced gene, stress associated protein 11",8," Vegetative organ - Culm,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0003677 - DNA binding, GO:0008270 - zinc ion binding, GO:0009408 - response to heat, GO:0042542 - response to hydrogen peroxide, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009611 - response to wounding","TO:0000207 - plant height, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity","PO:0001170 - seed development stage ","Os08g0504700 ","LOC_Os08g39450.1",null,null,"Os07g0638400",-4.3782697,0]
[{"$nulls":25},"Os01g0775400","Os01g0775400",4.324076,0,null,"Os01g0216400",2.5536957,"Os01g0776400",-0.9476285,{"$nulls":29},"qPRT-7-1(prt7.1)","qPRT-7-1(prt7.1)","penetrated root thickness (QTL)-7-1","penetrated root thickness (QTL)-7-1",7," Vegetative organ - Root",{"$nulls":46},"MIR399J","OsmiR399j, osa-miR399j, osa-MIR399j, Os-miR399j, miR399j","MICRORNA399J","microRNA399j, osa-miRNA399j",4," Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0016036 - cellular response to phosphate starvation, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0051365 - cellular response to potassium ion starvation, GO:0010106 - cellular response to iron ion starvation, GO:0006379 - mRNA cleavage",{"$nulls":6},"Os04g0581000",-4.6551485,0]
[{"$nulls":25},"Os07g0660500","Os07g0660500",-1.7354922,0,null,"Os11g0294400",2.5410712,"Os03g0749051",0.9533059,{"$nulls":29},"qRPF-5-1(rpf5.1)","qRPF-5-1(rpf5.1)","root pulling force (QTL)-5-1","root pulling force (QTL)-5-1",5," Vegetative organ - Root",{"$nulls":46},"DREB1E","OsDREB1E, OsERF030, OsERF#030, OsERF30, ERF30, AP2/EREBP#160, AP2/EREBP160, OsDREB1-1","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1E","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1E, ethylene response factor 30, APETALA2/ethylene-responsive element binding protein 160",4," Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0009631 - cold acclimation, GO:0009414 - response to water deprivation, GO:0005634 - nucleus",null,null,"Os04g0572400","LOC_Os04g48350.1",null,null,"Os04g0282400",-6.613068,0]
[{"$nulls":25},"Os04g0565400","Os04g0565400",-4.778893,0,null,"Os09g0127300",2.5347009,"Os07g0637200",0.95674485,{"$nulls":29},"qTRDW-6-1(trdw6.1)","qTRDW-6-1(trdw6.1)","total root dry weight (QTL)-6-1","total root dry weight (QTL)-6-1",6," Vegetative organ - Root",{"$nulls":46},"PDIL1-1","OsPDIL1;1, PDIL1;1, PDIL 1-1, PDI, OsPDIL1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1-1","PROTEIN DISULFIDE ISOMERASE-LIKE 1;1, protein disulfide-isomerase, PDI-like protein 1-1, Protein Disulfide Isomerase Like 1-1",11," Biochemical character,  Seed - Physiological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006662 - glycerol ether metabolic process, GO:0009055 - electron carrier activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009651 - response to salt stress, GO:0045454 - cell redox homeostasis, GO:0009408 - response to heat, GO:0055122 - response to very low light intensity stimulus, GO:0009960 - endosperm development, GO:0048316 - seed development, GO:0034975 - protein folding in endoplasmic reticulum, GO:0009409 - response to cold, GO:0046689 - response to mercury ion, GO:0010229 - inflorescence development, GO:0003756 - protein disulfide isomerase activity, GO:0005788 - endoplasmic reticulum lumen","TO:0000266 - chalky endosperm, TO:0000104 - floury endosperm, TO:0000382 - 1000-seed weight, TO:0000621 - inflorescence development trait, TO:0000460 - light intensity sensitivity, TO:0000303 - cold tolerance, TO:0000598 - protein content, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000333 - sugar content","PO:0009047 - stem , PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage , PO:0009005 - root , PO:0025034 - leaf , PO:0009010 - seed ","Os11g0199200","LOC_Os11g09280.2, LOC_Os11g09280.1",null,null,"Os01g0165000",0,-0.9488856]
[{"$nulls":25},"Os04g0321100","Os04g0321100",-4.168005,0,null,"Os04g0580400",2.524665,"Os04g0615550",0.9619837,{"$nulls":29},"qPRDW-9-1(prdw9.1)","qPRDW-9-1(prdw9.1)","penetrated root dry weight (QTL)-9-1","penetrated root dry weight (QTL)-9-1",9," Vegetative organ - Root",{"$nulls":46},"_","RA17, RAP, RAG1, OsEnS-97","_","16-kDa rice allergen, 16 kDa albumin, endosperm-specific gene 97",7," Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005615 - extracellular space, GO:0009651 - response to salt stress, GO:0004867 - serine-type endopeptidase inhibitor activity","TO:0006001 - salt tolerance",null,"Os07g0214100","LOC_Os07g11360.1",null,null,"Os07g0568300",0,-0.9563233]
[{"$nulls":25},"Os05g0370600","Os05g0370600",2.8318436,0,null,"Os02g0753000",2.5184875,"Os06g0608600",0.9678407,{"$nulls":29},"MADS25","OsMADS25","MADS BOX GENE 25","MADS box gene25, MADS-box transcription factor 25",4," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0010929 - positive regulation of auxin mediated signaling pathway, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0043565 - sequence-specific DNA binding, GO:0051512 - positive regulation of unidimensional cell growth, GO:0048364 - root development, GO:0003700 - transcription factor activity, GO:0009742 - brassinosteroid mediated signaling, GO:0010423 - negative regulation of brassinosteroid biosynthetic process, GO:0060359 - response to ammonium ion, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus, GO:0042542 - response to hydrogen peroxide, GO:0006979 - response to oxidative stress, GO:0009737 - response to abscisic acid stimulus","TO:0002676 - brassinosteroid content, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000605 - hydrogen peroxide content, TO:0002657 - oxidative stress, TO:0001013 - lateral root number, TO:0006002 - proline content, TO:0000227 - root length, TO:0000163 - auxin sensitivity, TO:0000656 - root development trait","PO:0007520 - root development stage , PO:0009005 - root ","Os04g0304400","LOC_Os04g23910.1",{"$nulls":41},"AMT3;3","OsAMT3;3, AMT3;3, OsAMT3.3","AMMONIUM TRANSPORTER 3;3","AMMONIUM TRANSPORTER 3;3, Ammonium transporter 3 member 3",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008519 - ammonium transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0070482 - response to oxygen levels","TO:0000015 - oxygen sensitivity",null,"Os02g0550800","LOC_Os02g34580.1",null,null,"Os01g0905800",3.5656865,-0.97642773]
[{"$nulls":25},"Os01g0856500","Os01g0856500",1.1745979,0,null,"Os02g0173100",2.5094662,"Os08g0481400",0.97592384,{"$nulls":29},"HAG702","OsHAG702, GCN5","HISTONE ACETYLTRANSFERASE HAG702","Histone acetyltransferase HAG702",10," Biochemical character,  Vegetative organ - Root","GO:0010484 - H3 histone acetyltransferase activity, GO:0043966 - histone H3 acetylation, GO:0009908 - flower development, GO:0006351 - transcription, DNA-dependent, GO:0009416 - response to light stimulus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0051302 - regulation of cell division, GO:0010075 - regulation of meristem growth, GO:0000123 - histone acetyltransferase complex, GO:0009926 - auxin polar transport, GO:0003677 - DNA binding, GO:0048364 - root development, GO:0010015 - root morphogenesis","TO:0000207 - plant height, TO:0000656 - root development trait","PO:0006085 - root meristem ","Os10g0415900","LOC_Os10g28040.1",{"$nulls":41},"ABC1","OsABC1, SPL32, OsGLU, OsFd-GOGAT, Fd-GOGAT, ABC1/ OsFd-GOGAT","ABNORMAL CYTOKININ RESPONSE 1","ferredoxin-glutamate synthase, ferredoxin-GOGAT, Ferredoxin-dependent Glu synthase, ferredoxin-dependent glutamate synthase, spotted leaf 32",7," Biochemical character,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016041 - glutamate synthase (ferredoxin) activity, GO:0046872 - metal ion binding, GO:0042744 - hydrogen peroxide catabolic process, GO:0009658 - chloroplast organization, GO:0010150 - leaf senescence, GO:0009409 - response to cold, GO:0042128 - nitrate assimilation, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0006520 - cellular amino acid metabolic process, GO:0031347 - regulation of defense response, GO:0016020 - membrane, GO:0042742 - defense response to bacterium, GO:0005739 - mitochondrion, GO:0010167 - response to nitrate, GO:0060359 - response to ammonium ion, GO:0080114 - positive regulation of glycine hydroxymethyltransferase activity, GO:0006537 - glutamate biosynthetic process, GO:0080093 - regulation of photorespiration, GO:0019740 - nitrogen utilization, GO:0006541 - glutamine metabolic process, GO:0009416 - response to light stimulus, GO:0009570 - chloroplast stroma, GO:0009853 - photorespiration, GO:0051538 - 3 iron, 4 sulfur cluster binding, GO:0009941 - chloroplast envelope, GO:0019676 - ammonia assimilation cycle, GO:0048046 - apoplast","TO:0000495 - chlorophyll content, TO:0000326 - leaf color, TO:0000340 - total soluble sugar content, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000346 - tiller number, TO:0002673 - amino acid content, TO:0000466 - carbon content, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os07g0658400","LOC_Os07g46460.1",null,null,"Os03g0843300",0,-0.989985]
[{"$nulls":25},"Os10g0147400","Os10g0147400",1.1443429,0,null,"Os04g0689400",2.5087469,"Os09g0545550",0.9768478,{"$nulls":29},"AHA2","OSA2, OsA2, osAHA2, AHA2, OsPMA2","H+-ATPASE 2","plasma membrane H+-ATPase 2, PM H+-ATPase 2, plasma membrane H+ P-Type ATPase 2",7," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0010106 - cellular response to iron ion starvation, GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0006754 - ATP biosynthetic process, GO:0046872 - metal ion binding, GO:0010167 - response to nitrate","TO:0000224 - iron sensitivity, TO:0006001 - salt tolerance",null,"Os07g0191200","LOC_Os07g09340.1",{"$nulls":41},"SULTR1;1","OsSultr1;1, OsSul1;1, Sul1;1, OsSultr1;1(a), OsSultr1;1(b)","SULPHATE TRANSPORTER 1;1","sulphate transporter 1;1, arsenic-responsive high affinity sulfate transporter, sulfate transporter 1;1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0042594 - response to starvation, GO:0005886 - plasma membrane, GO:0008271 - secondary active sulfate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0010035 - response to inorganic substance, GO:0009409 - response to cold, GO:0010038 - response to metal ion, GO:0010288 - response to lead ion, GO:0009970 - cellular response to sulfate starvation, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0010039 - response to iron ion, GO:0009628 - response to abiotic stimulus, GO:0046685 - response to arsenic, GO:0046686 - response to cadmium ion","TO:0006001 - salt tolerance, TO:0000224 - iron sensitivity, TO:0000007 - sulfur sensitivity, TO:0000168 - abiotic stress trait, TO:0000276 - drought tolerance, TO:0000031 - silicon sensitivity, TO:0000034 - chromium sensitivity, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0009072 - plant ovary , PO:0020148 - shoot apical meristem ","Os03g0195800","LOC_Os03g09970.2, LOC_Os03g09970.1, LOC_Os03g09970.4, LOC_Os03g09970.3",null,null,"Os02g0601300",1.6465193,-0.9919462]
[{"$nulls":25},"Os01g0546100","Os01g0546100",-1.498763,0,null,"Os05g0543000",2.50162,"Os03g0213900",0.9864238,{"$nulls":29},"MIR393B","OsmiR393b, miR393b, osa-MIR393bosa-miR393b osa-miR393b-3p osa-miR393b-5p","MICRORNA393B","MICRORNA393B",4," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0046688 - response to copper ion, GO:0009651 - response to salt stress, GO:0009411 - response to UV, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0010311 - lateral root formation, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage","TO:0006001 - salt tolerance, TO:0000160 - UV light sensitivity, TO:0000276 - drought tolerance, TO:0000315 - bacterial disease resistance, TO:0000021 - copper sensitivity, TO:0000615 - abscisic acid sensitivity",{"$nulls":44},"SULTR3;4","OsSultr3;4, OsSul3;4, OsaSULTR3;4, SPDT","SULPHATE TRANSPORTER 3;4","sulphate transporter 3;4, SULTR-like phosphorus distribution transporter",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0048316 - seed development, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0010288 - response to lead ion, GO:0009651 - response to salt stress, GO:0016021 - integral to membrane, GO:0009506 - plasmodesma, GO:0008271 - secondary active sulfate transmembrane transporter activity, GO:0009970 - cellular response to sulfate starvation, GO:0046686 - response to cadmium ion, GO:0005887 - integral to plasma membrane, GO:0015116 - sulfate transmembrane transporter activity, GO:0046685 - response to arsenic","TO:0002666 - seed phosphorus content, TO:0001024 - phosphorus content, TO:0001025 - leaf phosphorus content, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000034 - chromium sensitivity, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0009073 - stigma , PO:0025034 - leaf , PO:0009005 - root , PO:0005352 - xylem ","Os06g0143700","LOC_Os06g05160.1",null,null,"Os03g0735300",0,-1.0198506]
[{"$nulls":25},"Os09g0426000","Os09g0426000",-2.3399873,0,null,"Os02g0188900",2.499816,"Os11g0170400",0.98781806,{"$nulls":29},"_","OsLAX3, OsRAU3, OsAUX2, LAX3, RAU3, AUX2, OsAUX3, AUX3, ARF2","_","like aux1-3, related to AUX1-3, auxin transporter 2",5," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009629 - response to gravity, GO:0009415 - response to water, GO:0010541 - acropetal auxin transport, GO:0010328 - auxin influx transmembrane transporter activity, GO:0009733 - response to auxin stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0048364 - root development, GO:0005886 - plasma membrane, GO:0006865 - amino acid transport, GO:0009734 - auxin mediated signaling pathway, GO:0015293 - symporter activity, GO:0010044 - response to aluminum ion, GO:0009921 - auxin efflux carrier complex, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus","TO:0000354 - aluminum sensitivity, TO:0000163 - auxin sensitivity, TO:0001013 - lateral root number, TO:0002693 - gravity response trait, TO:0000227 - root length, TO:0002665 - root hair length, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002672 - auxin content, TO:0000656 - root development trait, TO:0000237 - water stress trait","PO:0007520 - root development stage , PO:0020127 - primary root , PO:0020121 - lateral root ","Os05g0447200","LOC_Os05g37470.3, LOC_Os05g37470.2, LOC_Os05g37470.1",{"$nulls":41},"SULTR4;1","OsSultr4;1, OsSul4;1, OsSultr4;1(a), OsSultr4;1(b), OsSultr4;1(c), OsSultr4;1(d)","SULPHATE TRANSPORTER 4;1","sulphate transporter 4;1",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0009651 - response to salt stress, GO:0008271 - secondary active sulfate transmembrane transporter activity, GO:0010288 - response to lead ion, GO:0046685 - response to arsenic, GO:0048316 - seed development, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0009970 - cellular response to sulfate starvation","TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000276 - drought tolerance, TO:0000034 - chromium sensitivity","PO:0001170 - seed development stage , PO:0025034 - leaf ","Os09g0240500","LOC_Os09g06499.1, LOC_Os09g06499.2",null,null,"Os04g0462900",-1.1300763,-1.0250721]
[{"$nulls":25},"Os01g0580500","Os01g0580500",2.9776776,0,null,"Os08g0498400",2.4886177,"Os02g0708400",0.9933732,{"$nulls":29},"AIM1","MFP, OsAIM, OsCHD, CHD","ABNORMAL INFLORESCENCE MERISTEM1","multifunctional protein, peroxisomal multifunctional protein, ABNORMAL INFLORESCENCE MERISTEM 1, cinnamoyl-CoA hydratase-dehydrogenase",2," Biochemical character,  Vegetative organ - Root","GO:0009695 - jasmonic acid biosynthetic process, GO:0009507 - chloroplast, GO:0005777 - peroxisome, GO:0048364 - root development, GO:0009697 - salicylic acid biosynthetic process, GO:0006635 - fatty acid beta-oxidation, GO:0005874 - microtubule, GO:0009908 - flower development, GO:0000166 - nucleotide binding, GO:0008017 - microtubule binding, GO:0003729 - mRNA binding, GO:0004300 - enoyl-CoA hydratase activity, GO:0004165 - dodecenoyl-CoA delta-isomerase activity, GO:0050662 - coenzyme binding, GO:0008692 - 3-hydroxybutyryl-CoA epimerase activity, GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity, GO:0018812 - 3-hydroxyacyl-CoA dehydratase activity, GO:0009845 - seed germination, GO:0005618 - cell wall, GO:0009506 - plasmodesma","TO:0000227 - root length, TO:0000656 - root development trait, TO:0000605 - hydrogen peroxide content","PO:0001031 - 4 root elongation stage ","Os02g0274100","LOC_Os02g17390.1",{"$nulls":41},"_","DREB2B","_","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2B",null," Tolerance and resistance - Stress tolerance",{"$nulls":7},"Os01g0310800",-1.179885,-1.0326945]
[{"$nulls":25},"Os05g0155200","Os05g0155200",-1.4368228,0,null,"Os03g0735000",2.4854543,"Os06g0137600",1.001351,{"$nulls":29},"RBOHH","rbohH, OsrbohH, Os rbohH, OsNox9, OsRboh9, Os-RbohH, RbohH","RESPIRATORY BURST OXIDASE HOMOLOG H","Respiratory Burst Oxidase Homolog H, NADPH oxidase 9",12," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009413 - response to flooding, GO:0005509 - calcium ion binding, GO:0004601 - peroxidase activity, GO:0070482 - response to oxygen levels, GO:0050832 - defense response to fungus, GO:0016174 - NAD(P)H oxidase activity, GO:0010618 - aerenchyma formation, GO:0009873 - ethylene mediated signaling pathway, GO:0009845 - seed germination, GO:0005886 - plasma membrane, GO:0009408 - response to heat, GO:0002238 - response to molecule of fungal origin","TO:0000173 - ethylene sensitivity, TO:0000524 - submergence tolerance, TO:0000015 - oxygen sensitivity, TO:0000439 - fungal disease resistance",null,"Os12g0541300","LOC_Os12g35610.1, LOC_Os12g35610.2, LOC_Os12g35610.3",{"$nulls":41},"GLYI8","OsGLYI8, OsGLYI-8, GLYI-8","GLYOXALASE I-8","glyoxalase I-8, glyoxalase I enzyme 8",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0009507 - chloroplast, GO:0005829 - cytosol, GO:0004462 - lactoylglutathione lyase activity, GO:0051596 - methylglyoxal catabolic process, GO:0005634 - nucleus, GO:0046872 - metal ion binding, GO:0019243 - methylglyoxal catabolic process to D-lactate",null,null,"Os05g0295800 ","LOC_Os05g22970.1",null,null,"Os01g0253300",0,-1.0444578]
[{"$nulls":25},"Os09g0483100","Os09g0483100",9.84637,0,null,"Os12g0115700",2.4840095,"Os06g0237502",1.0056585,{"$nulls":29},"IAA9","OsIAA9, OsIAA2","_","Aux/IAA protein 9",2," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0010104 - regulation of ethylene mediated signaling pathway, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0009629 - response to gravity","TO:0002693 - gravity response trait, TO:0000227 - root length, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity",null,"Os02g0805100 ","LOC_Os02g56120.3, LOC_Os02g56120.2, LOC_Os02g56120.1",{"$nulls":41},"SIZ1","OsSIZ1, OsSIZ1.1, OsSIZ1.2, OsSIZ1.3, DLN131, OsDLN131, OsPHD23, PHD23","_","SAP and MIZ 1, SUMO ligase Siz1, Siz/PIAS-type SUMO ligase 1, SIZ/PIAS-type SUMO E3 ligase 1, E3 SUMO-protein ligase SIZ1, DLN repressor 131, DLN motif protein 131, Plant homeo-domain finger protein 23, PHD finger protein 23",5," Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009737 - response to abscisic acid stimulus, GO:0009901 - anther dehiscence, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0009739 - response to gibberellin stimulus, GO:0003676 - nucleic acid binding, GO:0016874 - ligase activity","TO:0000342 - panicle axis angle, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000180 - spikelet fertility, TO:0000146 - seed length, TO:0000455 - seed set percent, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0125000","LOC_Os05g03430.3, LOC_Os05g03430.2, LOC_Os05g03430.1",null,null,"Os01g0695800",-2.7851703,-1.0602475]
[{"$nulls":25},"Os09g0483300","Os09g0483300",2.5192049,0,null,"Os02g0726300",2.4783533,"Os02g0829600",1.0107102,{"$nulls":29},"_","OsRab6B2, Rab6B2, OsRab6a, Rab6a","_","small GTP-binding protein OsRab6B2",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0007264 - small GTPase mediated signal transduction, GO:0005525 - GTP binding, GO:0040008 - regulation of growth, GO:0010037 - response to carbon dioxide, GO:0048364 - root development, GO:0010106 - cellular response to iron ion starvation, GO:0055072 - iron ion homeostasis","TO:0000495 - chlorophyll content, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000578 - root fresh weight, TO:0000571 - shoot fresh weight, TO:0000207 - plant height, TO:0000227 - root length, TO:0000656 - root development trait, TO:0000224 - iron sensitivity","PO:0007520 - root development stage ","Os03g0191400","LOC_Os03g09140.1, LOC_Os03g09140.2",{"$nulls":41},"EXPA20","OsEXPA20, OsEXP20, osaEXPa1.1","ALPHA-EXPANSIN 20","Rice expansin-20, Expansin-A20, Alpha-expansin-20",3," Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0010044 - response to aluminum ion, GO:0005576 - extracellular region, GO:0009664 - plant-type cell wall organization, GO:0016020 - membrane","TO:0000354 - aluminum sensitivity",null,"Os03g0156300","LOC_Os03g06060.1",null,null,"Os03g0280000",0,-1.0695858]
[{"$nulls":25},"Os02g0176700","Os02g0176700",2.2043464,0,null,"Os02g0591000",2.4723487,"Os09g0381100",1.0136734,{"$nulls":29},"_","OsHXA701, HXA701, ADA2","_","SWIRM domain-containing protein HXA701",3," Vegetative organ - Root","GO:0008270 - zinc ion binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006351 - transcription, DNA-dependent, GO:0003682 - chromatin binding, GO:0005634 - nucleus, GO:0051302 - regulation of cell division, GO:0048364 - root development, GO:0010015 - root morphogenesis, GO:0003677 - DNA binding","TO:0000656 - root development trait, TO:0000207 - plant height","PO:0006085 - root meristem ","Os03g0750800","LOC_Os03g53960.1, LOC_Os03g53960.2",{"$nulls":41},"PORA","OsPorA, OsPORA","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A","NADPH: protochlorophyllide oxidoreductase A, Protochlorophyllide oxidoreductase A",4," Biochemical character,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009658 - chloroplast organization, GO:0009416 - response to light stimulus, GO:0048366 - leaf development, GO:0000166 - nucleotide binding, GO:0016630 - protochlorophyllide reductase activity, GO:0015995 - chlorophyll biosynthetic process, GO:0015979 - photosynthesis","TO:0000298 - chlorophyll ratio, TO:0002715 - chloroplast development trait, TO:0000075 - light sensitivity, TO:0000495 - chlorophyll content, TO:0000655 - leaf development trait, TO:0000496 - carotenoid content","PO:0001050 - leaf development stage ","Os04g0678700","LOC_Os04g58200.3, LOC_Os04g58200.1, LOC_Os04g58200.2",null,null,"Os02g0644100",0,-1.0906506]
[{"$nulls":25},"Os06g0256300","Os06g0256300",1.7876912,0,null,"Os06g0210400",2.4676962,"Os01g0232700",1.0168957,{"$nulls":29},"MIR444C","miR444c, osa-MIR444c, osa-miR444c, osa-miR444c.1, osa-miR444c.2","MICRORNA444C","MICRORNA444c",null," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0060359 - response to ammonium ion, GO:0016132 - brassinosteroid biosynthetic process, GO:0048364 - root development, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0009742 - brassinosteroid mediated signaling","TO:0000227 - root length, TO:0000656 - root development trait, TO:0002676 - brassinosteroid content","PO:0009005 - root , PO:0007520 - root development stage ",{"$nulls":43},"RGA5","Os11gRGA5, OsRGA5, RGA5-A, RGA5-B, Pi5","R-GENE ANALOG 5","R-gene analog 5",11," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0050832 - defense response to fungus, GO:0016046 - detection of fungus, GO:0002238 - response to molecule of fungal origin, GO:0043531 - ADP binding","TO:0000074 - blast disease",null,"Os11g0225300","LOC_Os11g11810.1",null,null,"Os09g0542000",-1.9438957,-1.0918126]
[{"$nulls":25},"Os12g0137100","Os12g0137100",1.4761367,0,null,"Os06g0329350",2.4582286,"Os02g0125000",1.0228009,{"$nulls":29},"_","OsSRH3","_","short root hair 3",1," Vegetative organ - Root",{"$nulls":46},"GCC7","HMA3, OsHMA3, OsHMA3a, OsHMA3n, osHMA3, OsHMP34, HMP34","GRAIN CD CONCENTRATION ON CHROMOSOME 7","heavy metal ATPase 3, heavy metal transporter 3, heavy metal P-Type ATPase 3, heavy metal P1B-ATPase 3, grain Cd concentration on chromosome 7, Heavy metal-associated protein 34",7," Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0005524 - ATP binding, GO:0009751 - response to salicylic acid stimulus, GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, GO:0016021 - integral to membrane, GO:0046686 - response to cadmium ion, GO:0007034 - vacuolar transport, GO:0046873 - metal ion transmembrane transporter activity, GO:0046872 - metal ion binding, GO:0006754 - ATP biosynthetic process","TO:0000401 - plant growth hormone sensitivity","PO:0009005 - root ","Os07g0232900","LOC_Os07g12900.1",null,null,"Os08g0504700",0,-1.1219383]
[{"$nulls":25},"Os08g0562600","Os08g0562600",1.3711839,0,null,"Os07g0619800",2.4554048,"Os01g0754500",1.0233096,{"$nulls":29},"_","OsABA45, ABA45, OsGDP, GDP","_","Gram Domain Protein, ABA-responsive gene45, ABA-responsive gene 45",12," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000043 - root anatomy and morphology trait",null,"Os12g0478200","LOC_Os12g29400.1",{"$nulls":41},"PUB15","OsPUB15","PUB15","Plant U-Box 15",null," Tolerance and resistance - Stress tolerance",null,"TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress",{"$nulls":5},"Os01g0239100",0,-1.1356636]
[{"$nulls":25},"Os07g0161600","Os07g0161600",-0.9919488,0,null,"Os10g0451900",2.4453566,"Os09g0520000",1.0293268,{"$nulls":29},"_","OsbHLH132, bHLH132, OsRSL7, RSL7","_","basic helix-loop-helix protein 132, ROOT HAIR DEFECTIVE-SIX LIKE 7",11," Vegetative organ - Root","GO:0048767 - root hair elongation, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0010015 - root morphogenesis","TO:0002665 - root hair length","PO:0007519 - 5 root hair formation stage ","Os11g0634700","LOC_Os11g41640.1",{"$nulls":41},"IRO2","OsIRO2, OsbHLH056, bHLH056, bHLH56, OsbHLH56","IRON-RELATED TRANSCRIPTION FACTOR 2","basic helix-loop-helix protein 056, iron-related transcription factor 2",1," Tolerance and resistance - Stress tolerance,  Other","GO:0009409 - response to cold, GO:0010106 - cellular response to iron ion starvation, GO:0046688 - response to copper ion, GO:0009739 - response to gibberellin stimulus, GO:0010039 - response to iron ion, GO:0055072 - iron ion homeostasis, GO:0009751 - response to salicylic acid stimulus, GO:0005737 - cytoplasm, GO:0042594 - response to starvation, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0010114 - response to red light, GO:0009408 - response to heat","TO:0000303 - cold tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000259 - heat tolerance, TO:0000021 - copper sensitivity, TO:0000158 - red light sensitivity, TO:0000224 - iron sensitivity","PO:0009005 - root , PO:0009006 - shoot system ","Os01g0952800","LOC_Os01g72370.3, LOC_Os01g72370.2, LOC_Os01g72370.1",null,null,"Os04g0468600",0,-1.1685458]
[{"$nulls":25},"Os03g0317000","Os03g0317000",-1.0866922,0,null,"Os06g0146200",2.4388776,"Os05g0200100",1.0343539,{"$nulls":29},"BIDK1","OsBIDK1, OsDGK1, DGK1","BTH-INDUCIBLE DIACYLGLYCEROL KINASE 1","benzothiadiazole-inducible Diacylglycerol Kinase 1, BTH-inducible Diacylglycerol Kinase 1, BTH-inducible DGK 1, Diacylglycerol kinase 1",4," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0003951 - NAD+ kinase activity, GO:0009651 - response to salt stress, GO:0048364 - root development, GO:0007205 - activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, GO:0004143 - diacylglycerol kinase activity","TO:0000656 - root development trait, TO:0000482 - chemical stress sensitivity, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0001013 - lateral root number, TO:0000306 - root thickness","PO:0009005 - root , PO:0007520 - root development stage ","Os04g0634700","LOC_Os04g54200.2, LOC_Os04g54200.1",{"$nulls":41},"TIFY11A","OsJAZ3, JAZ3, OsJAZ 9, OsJAZ9, Os-JAZ9, JAZ9, OsTIFY11a, OsJAZ6, JAZ6","TIFY GENE 11A","Jasmonate ZIM-domain protein 3, Jasmonate ZIM-domain protein 9",3," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0031347 - regulation of defense response, GO:0009611 - response to wounding, GO:0051607 - defense response to virus, GO:0009651 - response to salt stress, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000172 - jasmonic acid sensitivity, TO:0000148 - viral disease resistance, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000180 - spikelet fertility, TO:0000397 - grain size",null,"Os03g0180800","LOC_Os03g08310.1",null,null,"Os10g0500700",-2.1642663,-1.1988082]
[{"$nulls":25},"Os01g0659800","Os01g0659800",-1.1134324,0,null,"Os09g0107900",2.4382186,"Os01g0171000",1.0357467,{"$nulls":29},"TAS3B1","TAS3b1, OsTAS3b1, OsTAS3a, TAS3a, OsTAS3b, TAS3b","TRANS-ACTING siRNA3B1","TRANS-ACTING siRNA3b1, Trans-Acting Short RNA precursor 3a",2," Vegetative organ - Root,  Other","GO:0010311 - lateral root formation, GO:0016246 - RNA interference",null,null,"Os02g0610950",{"$nulls":42},"TIFY10A","OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A","TIFY GENE 10A","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0031347 - regulation of defense response, GO:0005634 - nucleus, GO:0051607 - defense response to virus, GO:0009611 - response to wounding","TO:0002736 - flower number, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000172 - jasmonic acid sensitivity, TO:0000576 - stem length, TO:0000020 - black streak dwarf virus resistance, TO:0000148 - viral disease resistance, TO:0002757 - flag leaf length, TO:0002759 - grain number",null,"Os03g0402800","LOC_Os03g28940.2, LOC_Os03g28940.1",null,null,"Os03g0270500",0,-1.2082967]
[{"$nulls":25},"Os02g0314300","Os02g0314300",-1.3376585,0,null,"Os03g0237600",2.4354355,"Os08g0481800",1.0410608,{"$nulls":29},"CKT1","OHK5, HK, OsHK6, HK6, Crl1a, Ohk5, OsHK1, OsCKT1","CYTOKININ TOLERANT 1 ","histidine kinase 6, His kinase 6, cytokinin tolerant 1",2," Biochemical character,  Vegetative organ - Root","GO:0005985 - sucrose metabolic process, GO:0016020 - membrane, GO:0006355 - regulation of transcription, DNA-dependent, GO:0000155 - two-component sensor activity, GO:0048364 - root development, GO:0004673 - protein histidine kinase activity, GO:0043455 - regulation of secondary metabolic process, GO:0018106 - peptidyl-histidine phosphorylation, GO:0015995 - chlorophyll biosynthetic process, GO:0010109 - regulation of photosynthesis, GO:0009884 - cytokinin receptor activity, GO:0009736 - cytokinin mediated signaling, GO:0009735 - response to cytokinin stimulus, GO:0005524 - ATP binding, GO:0005982 - starch metabolic process, GO:0005783 - endoplasmic reticulum, GO:0000156 - two-component response regulator activity","TO:0000656 - root development trait, TO:0000167 - cytokinin sensitivity","PO:0007520 - root development stage , PO:0000025 - root tip , PO:0005029 - root primordium , PO:0000027 - lateral root tip , PO:0020121 - lateral root ","Os02g0738400","LOC_Os02g50480.1",{"$nulls":41},"TIFY9","OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ11/TIFY9","TIFY GENE 9","Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0031347 - regulation of defense response, GO:0009753 - response to jasmonic acid stimulus, GO:0051607 - defense response to virus, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0002757 - flag leaf length, TO:0000590 - grain weight, TO:0000172 - jasmonic acid sensitivity, TO:0000207 - plant height, TO:0000576 - stem length, TO:0002736 - flower number, TO:0000137 - days to heading, TO:0000040 - panicle length, TO:0002759 - grain number, TO:0000148 - viral disease resistance",null,"Os04g0395800","LOC_Os04g32480.1",null,null,"Os02g0673700",1.456047,-1.2354975]
[{"$nulls":25},"Os05g0502000","Os05g0502000",-2.6752036,0,null,"Os11g0197200",2.428458,"Os03g0175600",1.0514646,{"$nulls":29},"AM20","AM20","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 20",null,4," Vegetative organ - Root","GO:0044403 - symbiosis, encompassing mutualism through parasitism",null,null,"Os04g0280600","LOC_Os04g21160.1",{"$nulls":41},"GSTU12","OsGSTU12, OsGSTU6.2, GSTU6.2","TAU GLUTATHIONE S-TRANSFERASE 12","Glutathione S-transferase GSTU6.2, glutathione transferase U12",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0016740 - transferase activity, GO:0004364 - glutathione transferase activity, GO:0006749 - glutathione metabolic process, GO:0009407 - toxin catabolic process, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000276 - drought tolerance",null,"Os10g0527800","LOC_Os10g38360.1",null,null,"Os04g0672100",0,-1.2613779]
[{"$nulls":25},"Os07g0621800","Os07g0621800",5.2146544,0,null,"Os03g0172100",2.4267752,"Os05g0457300",1.0542445,{"$nulls":29},"AM25","AM25, OsNIP1;4, NIP1-4, OsNIP1.4, NIP1.4","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 25","Aquaporin NIP1-4, NOD26-like intrinsic protein 1-4",6," Biochemical character,  Vegetative organ - Root","GO:0055085 - transmembrane transport, GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0005215 - transporter activity, GO:0044403 - symbiosis, encompassing mutualism through parasitism",null,null,"Os06g0552700","LOC_Os06g35930.1",{"$nulls":41},"GSTU23","OsGSTU23","TAU GLUTATHIONE S-TRANSFERASE 23",null,10," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0016740 - transferase activity, GO:0006749 - glutathione metabolic process, GO:0005737 - cytoplasm, GO:0004364 - glutathione transferase activity, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os10g0530400","LOC_Os10g38700.1",null,null,"Os07g0673900",2.1234548,-1.2653424]
[{"$nulls":25},"Os07g0406300","Os07g0406300",1.7681333,0,null,"Os03g0736500",2.4215477,"Os06g0104000",1.0599656,{"$nulls":29},"DMAS1","OsDMAS1","DEOXYMUGINEIC ACID SYNTHASE 1","sativa deoxymugineic acid synthase1, Deoxymugineic acid synthase1, Deoxymugineic acid synthase 1, deoxymugineic acid synthase1",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006826 - iron ion transport, GO:0010106 - cellular response to iron ion starvation, GO:0016491 - oxidoreductase activity","TO:0000224 - iron sensitivity","PO:0006036 - root epidermis , PO:0020124 - root stele , PO:0009005 - root , PO:0006203 - pericycle , PO:0000071 - companion cell , PO:0000258 - root cortex , PO:0005020 - vascular bundle , PO:0005417 - phloem , PO:0005421 - parenchyma , PO:0005772 - exodermis ","Os03g0237100","LOC_Os03g13390.2",{"$nulls":41},"PSBP","PsbP, OsPsbP, psbP","PHOTOSYSTEM II SUBUNIT","PSII subunit PsbP, photosystem II subunit PsbP, Chloroplast 23 KD polypeptide of photosystem II, Oxygen-evolving enhancer protein 2",7," Tolerance and resistance - Disease resistance","GO:0019898 - extrinsic to membrane, GO:0051607 - defense response to virus, GO:0005509 - calcium ion binding, GO:0015979 - photosynthesis, GO:0009654 - oxygen evolving complex, GO:0009658 - chloroplast organization, GO:0010027 - thylakoid membrane organization","TO:0000148 - viral disease resistance, TO:0002715 - chloroplast development trait",null,"Os07g0141400","LOC_Os07g04840.1",null,null,"Os08g0440300",-1.4330281,-1.3003114]
[{"$nulls":25},"Os10g0167300","Os10g0167300",1.5346702,0,null,"Os03g0395000",2.4157012,"Os09g0569780",1.0673772,{"$nulls":29},"SMG1","OsMKK4, MKK4, OsMKK4/SMG1, OsMAPKK4, MAPKK4, OsMEK4, MEK4, OsSMG1, SMG1/OsMEK6, OsMEK6, MEK6","SMALL GRAIN 1","MAPK kinase 4, mitogen-activated protein kinase kinase 4, small grain1, LARGE11, large grain 11",2," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching,  Reproductive organ - Spikelet, flower, glume, awn","GO:0042742 - defense response to bacterium, GO:0008283 - cell proliferation, GO:0050832 - defense response to fungus, GO:0009741 - response to brassinosteroid stimulus, GO:0042127 - regulation of cell proliferation, GO:0009690 - cytokinin metabolic process, GO:0009611 - response to wounding, GO:0045595 - regulation of cell differentiation, GO:0009742 - brassinosteroid mediated signaling, GO:0009751 - response to salicylic acid stimulus, GO:0048364 - root development, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009409 - response to cold, GO:0009743 - response to carbohydrate stimulus, GO:0080027 - response to herbivore, GO:0010200 - response to chitin, GO:0002213 - defense response to insect, GO:0010229 - inflorescence development, GO:0000165 - MAPKKK cascade, GO:0009737 - response to abscisic acid stimulus","TO:0000454 - stem borer resistance, TO:0000396 - grain yield, TO:0002669 - diterpenoid phytoalexin content, TO:0000615 - abscisic acid sensitivity, TO:0000397 - grain size, TO:0000439 - fungal disease resistance, TO:0000447 - filled grain number, TO:0002677 - brassinosteroid sensitivity, TO:0002660 - cytokinin content, TO:0000656 - root development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000160 - UV light sensitivity, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000456 - spikelet number, TO:0002759 - grain number, TO:0000303 - cold tolerance, TO:0000734 - grain length","PO:0007520 - root development stage , PO:0001083 - inflorescence development stage ","Os02g0787300","LOC_Os02g54600.1",{"$nulls":41},"_","ASCAB9-A, CP26, Lhcb5, LHCB5, OsLHCB5","_","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0046872 - metal ion binding, GO:0010287 - plastoglobule, GO:0050832 - defense response to fungus, GO:0010218 - response to far red light, GO:0009637 - response to blue light, GO:0009533 - chloroplast stromal thylakoid, GO:0009765 - photosynthesis, light harvesting, GO:0009783 - photosystem II antenna complex, GO:0009517 - PSII associated light-harvesting complex II, GO:0010114 - response to red light, GO:0010196 - nonphotochemical quenching","TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000075 - light sensitivity",null,"Os11g0242800","LOC_Os11g13890.6, LOC_Os11g13890.5, LOC_Os11g13890.4, LOC_Os11g13890.2, LOC_Os11g13890.1",null,null,"Os08g0126300",-1.3604058,-1.3236626]
[{"$nulls":25},"Os01g0817700","Os01g0817700",1.2706674,0,null,"Os03g0124900",2.4120312,"Os02g0799300",1.0689806,{"$nulls":29},"CRL4","OsGNOM1, GNOM1, CRL4/GNOM1, CRL2/CRL3","CROWN ROOTLESS 4","crown rootless4",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009826 - unidimensional cell growth, GO:0009942 - longitudinal axis specification, GO:0010087 - phloem or xylem histogenesis, GO:0000911 - cytokinesis by cell plate formation, GO:0010540 - basipetal auxin transport, GO:0016192 - vesicle-mediated transport, GO:0034059 - response to anoxia, GO:0080119 - ER body organization, GO:0048765 - root hair cell differentiation, GO:0010292 - GTP:GDP antiporter activity, GO:0032012 - regulation of ARF protein signal transduction, GO:0001736 - establishment of planar polarity, GO:0005086 - ARF guanyl-nucleotide exchange factor activity, GO:0005802 - trans-Golgi network, GO:0007155 - cell adhesion",null,null,"Os03g0666100","LOC_Os03g46330.1",{"$nulls":41},"_","OsNIA2, NIA2, OsNR2, NR2","_","nitrate reductase apoenzyme 2, nitrate reductase 2",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0042128 - nitrate assimilation, GO:0010167 - response to nitrate, GO:0009055 - electron carrier activity, GO:0020037 - heme binding, GO:0030151 - molybdenum ion binding, GO:0006809 - nitric oxide biosynthetic process, GO:0043546 - molybdopterin cofactor binding, GO:0050464 - nitrate reductase (NADPH) activity, GO:0050660 - FAD binding, GO:0010157 - response to chlorate",null,"PO:0009005 - root ","Os08g0468700","LOC_Os08g36500.1",null,null,"Os04g0111900",0,-1.3404331]
[{"$nulls":25},"Os02g0232400","Os02g0232400",-1.0834336,0,null,"Os07g0407700",2.4074306,"Os09g0462100",1.0731717,{"$nulls":29},"GRAS16","AM18, OsAM1, OsGRAS-16, OsGRAS16, GRAS-16, PsiOsGRAS4, PsiGRAS4","GRAS PROTEIN 16","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 18, GRAS protein 16",3," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0044403 - symbiosis, encompassing mutualism through parasitism","TO:0000175 - bacterial blight disease resistance, TO:0000255 - sheath blight disease resistance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,null,"LOC_Os03g40080",{"$nulls":41},"PHR1","OsPHR1","PHOSPHATE STARVATION RESPONSE 1","PHOSPHATE RESPONSE1",3," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0055081 - anion homeostasis, GO:0003677 - DNA binding, GO:0048767 - root hair elongation, GO:0042594 - response to starvation","TO:0002665 - root hair length","PO:0007519 - 5 root hair formation stage ","Os03g0329900","LOC_Os03g21240.1",null,null,"Os04g0652400",-3.14538,-1.3742207]
[{"$nulls":25},"Os04g0479200","Os04g0479200",-1.1675345,0,null,"Os04g0526600",2.402092,"Os12g0195100",1.0777216,{"$nulls":29},"CAND1","OsCAND1","CULLIN-ASSOCIATED AND NEDDYLATION-DISSOCIATED 1","Cullin-associated and neddylation-dissociated 1",2," Vegetative organ - Root","GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway, GO:0010265 - SCF complex assembly, GO:0016567 - protein ubiquitination, GO:0048364 - root development",null,"PO:0007518 - crown root emergence stage , PO:0007504 - crown root primordium formation stage , PO:0020123 - root cap ","Os02g0167700","LOC_Os02g07120.1",{"$nulls":41},"ATG8C","OsATG8c","AUTOPHAGY ASSOCIATED GENE 8C","autophagy 8c, OsAuTophaGy8c",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005874 - microtubule, GO:0015031 - protein transport, GO:0000421 - autophagic vacuole membrane, GO:0033110 - CVT vesicle membrane, GO:0006914 - autophagy","TO:0000432 - temperature response trait",null,"Os08g0191600","LOC_Os08g09240.1, LOC_Os08g09240.2, LOC_Os08g09240.3",null,null,"Os11g0705200",0,-1.414639]
[{"$nulls":25},"Os09g0261300","Os09g0261300",-1.2515861,0,null,"Os04g0430400",2.3971803,"Os11g0237700",1.082571,{"$nulls":29},"ENL2","OsCTPS1, CTPS1","ENDOSPERMLESS 2","cytidine triphosphate synthase 1, endospermless 2",1," Biochemical character,  Vegetative organ - Root,  Seed - Morphological traits - Endosperm,  Seed - Morphological traits - Grain shape,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0048364 - root development, GO:0048487 - beta-tubulin binding, GO:0043014 - alpha-tubulin binding, GO:0009960 - endosperm development, GO:0019856 - pyrimidine base biosynthetic process, GO:0006541 - glutamine metabolic process, GO:0006241 - CTP biosynthetic process, GO:0042802 - identical protein binding, GO:0003883 - CTP synthase activity, GO:0005524 - ATP binding, GO:0010342 - cellularization of endosperm, GO:0051785 - positive regulation of nuclear division, GO:0000226 - microtubule cytoskeleton organization, GO:0008017 - microtubule binding, GO:0015631 - tubulin binding","TO:0000181 - seed weight, TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000227 - root length, TO:0000396 - grain yield, TO:0000656 - root development trait, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000397 - grain size, TO:0002692 - root meristem development","PO:0020020 - nucellus , PO:0007631 - plant embryo stage , PO:0001170 - seed development stage , PO:0009084 - pericarp , PO:0020148 - shoot apical meristem , PO:0009049 - inflorescence , PO:0025074 - embryo sac , PO:0009009 - plant embryo , PO:0007520 - root development stage , PO:0007633 - endosperm development stage , PO:0009089 - endosperm ","Os01g0616900","LOC_Os01g43020.1",{"$nulls":41},"4CL5","Os4CL5, 4CL3, Os4CL3","4-COUMARATE:COENZYME A LIGASE 5","4-coumarate:coenzyme A ligase 5, 4-hydroxycinnamate CoA ligase 3",8," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009718 - anthocyanin biosynthetic process, GO:0009698 - phenylpropanoid metabolic process, GO:0009807 - lignan biosynthetic process, GO:0009408 - response to heat, GO:0052386 - cell wall thickening, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0016207 - 4-coumarate-CoA ligase activity","TO:0000074 - blast disease, TO:0000432 - temperature response trait, TO:0000326 - leaf color, TO:0000731 - lignin content, TO:0000733 - lignin biosynthesis trait",null,"Os08g0448000","LOC_Os08g34790.1",null,null,"Os06g0125500",0,-1.4356852]
[{"$nulls":25},"Os07g0410100","Os07g0410100",-1.5372734,0,null,"Os05g0131900",2.3872197,"Os04g0249700",1.0978659,{"$nulls":29},"_","EIL1, OsEIL1, MHZ6/OsEIL1, MHZ6","_","ETHYLENE INSENSITIVE3-LIKE1, ETHYLENE INSENSITIVE3-LIKE 1, maohuzi6, maohuzi 6",3," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress, GO:0009723 - response to ethylene stimulus, GO:0031349 - positive regulation of defense response, GO:0010104 - regulation of ethylene mediated signaling pathway, GO:0005622 - intracellular, GO:0048364 - root development, GO:0009873 - ethylene mediated signaling pathway, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect","TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000173 - ethylene sensitivity, TO:0000476 - growth hormone content, TO:0002668 - jasmonic acid content, TO:0000424 - brown planthopper resistance, TO:0000255 - sheath blight disease resistance",null,"Os03g0324300","LOC_Os03g20790.1",{"$nulls":41},"ERF106","DERF7, OsDERF7, OsERF#106, OsERF106, AP2/EREBP#111, AP2/EREBP111, OsERF106MZ, ERF106MZ","ETHYLENE RESPONSE FACTOR 106","drought-responsive ethylene response factor 7, drought-responsive ERF 7, ethylene response factor 106, APETALA2/ethylene-responsive element binding protein 111",8," Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity","GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005737 - cytoplasm, GO:0050801 - ion homeostasis","TO:0006001 - salt tolerance, TO:0000608 - sodium content, TO:0000609 - potassium content, TO:0000654 - shoot development trait","PO:0003011 - root vascular system , PO:0007615 - flower development stage , PO:0009046 - flower , PO:0020127 - primary root , PO:0007057 - 0 seed germination stage , PO:0009010 - seed ","Os08g0537900","LOC_Os08g42550.4, LOC_Os08g42550.3, LOC_Os08g42550.2, LOC_Os08g42550.1, LOC_Os08g42550.6, LOC_Os08g42550.5",null,null,"Os04g0543700",0,-1.4760503]
[{"$nulls":25},"Os01g0796400","Os01g0796400",-2.000273,0,null,"Os04g0410200",2.3813775,"Os03g0823400",1.0985451,{"$nulls":29},"_","OsZFP, ZFP","_","zinc finger protein",1," Vegetative organ - Root","GO:0048527 - lateral root development, GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway, GO:0003676 - nucleic acid binding, GO:0008270 - zinc ion binding","TO:0000163 - auxin sensitivity, TO:0000656 - root development trait","PO:0007520 - root development stage ","Os01g0252900","LOC_Os01g14920.1",{"$nulls":41},"ERF11","OsERF#011, OsERF011, OsERF11, OsDERF9, DERF9, AP2/EREBP#083, AP2/EREBP83, DLN69, OsDLN69","ETHYLENE RESPONSE FACTOR 11","ethylene response factor 11, drought-responsive ethylene response factor 9, drought-responsive ERF 9, APETALA2/ethylene-responsive element binding protein 83, DLN repressor 69, DLN motif protein 69",2," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os02g0781300","LOC_Os02g54050.1",null,null,"Os03g0132900",0,-1.4874182]
[{"$nulls":25},"Os03g0293500","Os03g0293500",2.8784456,0,null,"Os11g0544800",2.3657959,"Os04g0103700",1.1126283,{"$nulls":29},"GATB","OsGatB, GatB","GLUTAMYL-TRNA(GLN)  AMIDOTRANSFERASE B SUBUNIT","glutamyl-tRNA(Gln) amidotransferase B subunit family protein, glutamyl-tRNA(Gln) amidotransferase B subunit, aspartyl/glutamyl-tRNA amidotransferase subunit B",11," Vegetative organ - Root","GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, GO:0009826 - unidimensional cell growth, GO:0005739 - mitochondrion, GO:0005524 - ATP binding, GO:0009507 - chloroplast, GO:0006754 - ATP biosynthetic process, GO:0006412 - translation, GO:0080022 - primary root development, GO:0070681 - glutaminyl-tRNAGln biosynthesis via transamidation, GO:0051301 - cell division","TO:0000656 - root development trait, TO:0000227 - root length, TO:0002687 - cell elongation trait, TO:0002692 - root meristem development","PO:0007520 - root development stage , PO:0007527 - 2 root meristem formation stage , PO:0000025 - root tip ","Os11g0544800","LOC_Os11g34210.1, LOC_Os11g34210.2",{"$nulls":41},"RBCS4","RbcS, RbcS4, OsRBCS4, OsRbcS4","RUBISCO SMALL SUBUNIT 4","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4",12," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0016984 - ribulose-bisphosphate carboxylase activity, GO:0015977 - carbon utilization by fixation of carbon dioxide, GO:0009853 - photorespiration, GO:0004497 - monooxygenase activity, GO:0015979 - photosynthesis","TO:0000396 - grain yield, TO:0001015 - photosynthetic rate, TO:0000167 - cytokinin sensitivity, TO:0000457 - total biomass yield, TO:0000011 - nitrogen sensitivity",null,"Os12g0292400","LOC_Os12g19470.2, LOC_Os12g19470.1",null,null,"Os01g0869200",-1.1575942,-1.547753]
[{"$nulls":25},"Os09g0440300","Os09g0440300",-1.2694564,0,null,"Os08g0214300",2.3583887,"Os01g0779100",1.1154661,{"$nulls":29},"GDPD2","OsGDPD2","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 2","Glycerophosphodiester phosphodiesterase 2",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0008081 - phosphoric diester hydrolase activity, GO:0042594 - response to starvation, GO:0006629 - lipid metabolic process, GO:0046475 - glycerophospholipid catabolic process, GO:0008889 - glycerophosphodiester phosphodiesterase activity, GO:0045017 - glycerolipid biosynthetic process","TO:0000627 - relative phosphorus utilization efficiency, TO:0000227 - root length, TO:0000143 - relative biomass, TO:0000602 - total fat content","PO:0025034 - leaf , PO:0009038 - palea , PO:0009037 - lemma , PO:0009066 - anther , PO:0009010 - seed , PO:0009047 - stem , PO:0009005 - root , PO:0000003 - whole plant ","Os02g0514500","LOC_Os02g31030.1, LOC_Os02g31030.2",{"$nulls":41},"_","ROX3","_","Regulator of XA21-3",6," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os06g0231300","LOC_Os06g12530.1",null,null,"Os04g0668900",0,-1.6065053]
[{"$nulls":25},"Os01g0847700","Os01g0847700",-3.913067,0,null,"Os10g0401000",2.3568397,"Os12g0155200",1.116347,{"$nulls":29},"LBD1-8","OsLBD1-8","LBD-CONTAINING PROTEIN 1-8","lateral organ boundary domain-containing protein 1-8, LBD-containing protein 1-8",1," Vegetative organ - Root","GO:0010618 - aerenchyma formation, GO:0010311 - lateral root formation",null,"PO:0000258 - root cortex , PO:0005029 - root primordium ","Os01g0825000","LOC_Os01g60960.1",{"$nulls":41},"DMT1","OsMCA1, MCA1, OsDMT1, OsDMT1/OsMCA1","DWARF AND MULTI-TILLERING1","Plasma membrane protein OsMCA1, Mid1-complementing activity1, dwarf and multi-tillering 1",3," Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance","GO:0009739 - response to gibberellin stimulus, GO:0070509 - calcium ion import, GO:0009685 - gibberellin metabolic process, GO:0050801 - ion homeostasis, GO:0005886 - plasma membrane, GO:0005887 - integral to plasma membrane, GO:0048528 - post-embryonic root development, GO:0007638 - mechanosensory behavior","TO:0000456 - spikelet number, TO:0002675 - gibberellic acid content, TO:0000734 - grain length, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000040 - panicle length",null,"Os03g0157300","LOC_Os03g06120.3, LOC_Os03g06120.2, LOC_Os03g06120.1",null,null,"Os12g0603800",0,-1.6109797]
[{"$nulls":25},"Os09g0457600","Os09g0457600",2.0612733,0,null,"Os02g0811000",2.3510377,"Os09g0433600",1.1256065,{"$nulls":29},"UBC45","OsUBC45","UBIQUITIN-CONJUGATING ENZYME 45","Ubiquitin-conjugating enzyme 45",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0019375 - galactolipid biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0006301 - postreplication repair, GO:0006635 - fatty acid beta-oxidation, GO:0080129 - proteasome core complex assembly, GO:0051788 - response to misfolded protein, GO:0048471 - perinuclear region of cytoplasm, GO:0048316 - seed development, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0009407 - toxin catabolic process, GO:0009414 - response to water deprivation, GO:0042631 - cellular response to water deprivation, GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0016036 - cellular response to phosphate starvation","TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0000653 - seed development trait, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance","PO:0009005 - root , PO:0001170 - seed development stage ","Os03g0308000","LOC_Os03g19500.1",{"$nulls":41},"SAPK5","OsSAPK5, OsSnRK2.5, SnRK2.5","STRESS/ABA-ACTIVATED PROTEIN KINASE 5","stress/ABA-activated protein kinase 5, Stress-Activated Protein Kinase 5, Sucrose nonfermenting-1-related protein kinase 2.5",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0005634 - nucleus, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000095 - osmotic response sensitivity",null,"Os04g0691100","LOC_Os04g59450.3, LOC_Os04g59450.1, LOC_Os04g59450.2",null,null,"Os03g0687700",0,-1.6818318]
[{"$nulls":25},"Os03g0221500","Os03g0221500",1.890921,0,null,"Os02g0590000",2.3453267,"Os01g0859400",1.130426,{"$nulls":29},"_","Hwi2, OsSub9, SUB9","_","Subtilisin 9, SUBTILISIN 9",1," Biochemical character,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0004252 - serine-type endopeptidase activity, GO:0005618 - cell wall, GO:0048364 - root development, GO:0010042 - response to manganese ion","TO:0000207 - plant height, TO:0000084 - root number, TO:0000392 - sterility or fertility trait, TO:0000432 - temperature response trait, TO:0000073 - manganese sensitivity, TO:0000654 - shoot development trait","PO:0007520 - root development stage ","Os01g0795400","LOC_Os01g58290.1, LOC_Os01g58290.2, LOC_Os01g58290.3, LOC_Os01g58290.4",{"$nulls":41},"SAPK8","OsSAPK8, OsSnRK2.8, SnRK2.8","STRESS/ABA-ACTIVATED PROTEIN KINASE 8","stress/ABA-activated protein kinase 8, Stress-Activated Protein Kinase 8, Sucrose nonfermenting-1-related protein kinase 2.8",3," Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0005524 - ATP binding, GO:0010118 - stomatal movement, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0764800","LOC_Os03g55600.1",null,null,"Os01g0675800",-2.1810002,-1.7036854]
[{"$nulls":25},"Os01g0236800","Os01g0236800",-0.97098285,0,null,"Os02g0139300",2.340573,"Os04g0550500",1.1363305,{"$nulls":29},"LSI3","Lsi3, OsLsi3, Lsi3/SIET2, SIET2","LOW SILICON RICE 3","low silicon 3, silicon efflux transporter 2, Si efflux transporter 2",10," Vegetative organ - Root","GO:0032523 - silicon efflux transmembrane transporter activity, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane",null,null,"Os10g0547500","LOC_Os10g39980.1",{"$nulls":41},"_","CYP735A3","_","cytochrome 450 735A3",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0016021 - integral to membrane, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance",null,"Os08g0429800 ","LOC_Os08g33300.1",null,null,"Os02g0802500",4.632011,-1.7631084]
[{"$nulls":25},"Os04g0630300","Os04g0630300",6.4725347,0,null,"Os04g0496300",2.3302655,"Os04g0488200",1.1440507,{"$nulls":29},"_","OsMTL1, MTL1","_","METALLOTHIONEIN-LIKE PROTEIN 1",12," Vegetative organ - Root",null,null,"PO:0009005 - root ","Os12g0568350",{"$nulls":42},"CYP71Z6","Oscyp71Z6","P-450 71Z6","Cytochrome P450 71Z6",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0009055 - electron carrier activity, GO:0005506 - iron ion binding, GO:0016021 - integral to membrane, GO:0016102 - diterpenoid biosynthetic process, GO:0050832 - defense response to fungus, GO:0020037 - heme binding","TO:0000074 - blast disease",null,"Os02g0570500","LOC_Os02g36150.1",null,null,"Os01g0933200",-1.5156695,-1.8457562]
[{"$nulls":25},"Os12g0197100","Os12g0197100",5.367574,0,null,"Os06g0531200",2.3217194,"Os05g0461350",1.1472629,{"$nulls":29},"RLCK314","OsRLCK314, 25L2","RECEPTOR-LIKE CYTOPLASMIC KINASE 314","Receptor-like Cytoplasmic Kinase 314, LOC_Os11g07225-like 2",11," Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness","GO:0048364 - root development, GO:0009408 - response to heat","TO:0000392 - sterility or fertility trait, TO:0000207 - plant height, TO:0000084 - root number, TO:0000654 - shoot development trait, TO:0000432 - temperature response trait","PO:0007520 - root development stage ","Os11g0173550","LOC_Os11g07240.1",{"$nulls":41},"TRXH2","OsTRXh2, Os2, OsTrxh2","THIOREDOXIN H-TYPE 2","Thioredoxin H-type 2, H-type Thioredoxin 2, thioredoxin h2",5," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0045454 - cell redox homeostasis, GO:0009055 - electron carrier activity, GO:0042742 - defense response to bacterium, GO:0009627 - systemic acquired resistance, GO:0050778 - positive regulation of immune response, GO:0015035 - protein disulfide oxidoreductase activity, GO:0006662 - glycerol ether metabolic process","TO:0000175 - bacterial blight disease resistance","PO:0025034 - leaf ","Os05g0508500","LOC_Os05g43252.1, LOC_Os05g43252.2",null,null,"Os10g0491000",-4.852097,-1.8751928]
[{"$nulls":25},"Os09g0262000","Os09g0262000",4.210138,0,null,"Os10g0130500",2.3171341,"Os09g0460400",1.1533337,{"$nulls":29},"_","OsNIT1, NIT1, OsNIT2, NIT2, OsNIT4A, NIT4A","_","nitrilase 1, Nitrilase 2",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0080061 - indole-3-acetonitrile nitrilase activity, GO:0019499 - cyanide metabolic process, GO:0009507 - chloroplast, GO:0047427 - cyanoalanine nitrilase activity, GO:0046686 - response to cadmium ion, GO:0080109 - indole-3-acetonitrile nitrile hydratase activity, GO:0060359 - response to ammonium ion, GO:0010167 - response to nitrate, GO:0005829 - cytosol, GO:0009851 - auxin biosynthetic process, GO:0009970 - cellular response to sulfate starvation, GO:0005886 - plasma membrane, GO:0047558 - 3-cyanoalanine hydratase activity, GO:0048046 - apoplast, GO:0009506 - plasmodesma, GO:0051410 - detoxification of nitrogen compound","TO:0002672 - auxin content, TO:0001013 - lateral root number, TO:0000011 - nitrogen sensitivity, TO:0000227 - root length",null,"Os02g0635200","LOC_Os02g42350.2, LOC_Os02g42350.1",{"$nulls":41},"_","OsNIA1, OsNia1, NIA1, Nia1, OsNR, NR, OsNR2, NR2, NIA2","_","nitrate reductase, nitrate reductase 2, NO3-reductase 2, NADH/NADPH-dependent NO3-reductase 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009414 - response to water deprivation, GO:0006809 - nitric oxide biosynthetic process, GO:0009738 - abscisic acid mediated signaling, GO:0010157 - response to chlorate, GO:0009055 - electron carrier activity, GO:0020037 - heme binding, GO:0050660 - FAD binding, GO:0009416 - response to light stimulus, GO:0009610 - response to symbiotic fungus, GO:0009703 - nitrate reductase (NADH) activity, GO:0043546 - molybdopterin cofactor binding, GO:0030151 - molybdenum ion binding, GO:0005506 - iron ion binding, GO:0005773 - vacuole, GO:0005886 - plasma membrane, GO:0042128 - nitrate assimilation","TO:0000346 - tiller number, TO:0000396 - grain yield, TO:0000276 - drought tolerance",null,"Os02g0770800","LOC_Os02g53130.1",null,null,"Os07g0186000",-1.7293295,-1.968882]
[{"$nulls":25},"Os05g0554400","Os05g0554400",3.8717346,0,null,"Os10g0133400",2.3093557,"Os08g0260000",1.1621246,{"$nulls":81},"SGT","OsSGT, UGT74H3, OsUGT74H3","SALICYLIC ACID GLUCOSYLTRANSFERASE","salicylic acid glucosyltransferase, SA-glucosyltransferase, UDP-glucose-dependent glycosyltransferase 74H3",9," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0009611 - response to wounding, GO:0043231 - intracellular membrane-bounded organelle, GO:0008152 - metabolic process, GO:0080044 - quercetin 7-O-glucosyltransferase activity",null,"PO:0009066 - anther , PO:0009049 - inflorescence ","Os09g0518200","LOC_Os09g34250.1",null,null,"Os11g0657900",0,-2.0279644]
[{"$nulls":25},"Os08g0512700","Os08g0512700",3.650962,0,null,"Os01g0702500",2.3082602,"Os11g0562600",1.1660849,{"$nulls":81},"MYB3R2","OsMYB3R-2, OsMYB3R2, OsMSL07, MSL07, MSL7, DLN28, OsDLN28","_","O. sativa R1R2R3 MYB-2, R1R2R3 MYB-2, Myb/SANT-LIKE 7, DLN repressor 28, DLN motif protein 28",1," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009751 - response to salicylic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0003677 - DNA binding, GO:0003682 - chromatin binding, GO:0006970 - response to osmotic stress, GO:0009609 - response to symbiotic bacterium","TO:0000095 - osmotic response sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance","PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0841500","LOC_Os01g62410.2, LOC_Os01g62410.1",null,null,"Os01g0597800",-4.481426,-2.084027]
[{"$nulls":25},"Os11g0143200","Os11g0143200",3.212064,0,null,"Os03g0116400",2.3022413,"Os02g0173100",1.1731826,{"$nulls":81},"TPP5","OsTPP5","TREHALOSE-6-PHOSPHATE PHOSHPHATASE 5",null,4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0005992 - trehalose biosynthetic process",null,null,"Os04g0554000","LOC_Os04g46760.1",null,null,"Os02g0526400",-2.1413813,-2.2417166]
[{"$nulls":25},"Os06g0227250","Os06g0227250",2.731699,0,null,"Os07g0534000",2.2950852,"Os07g0247100",1.180143,{"$nulls":81},"_","LIP5, lip5","_","low-temperature-induced protein 5",null," Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast",{"$nulls":6},"Os03g0188100",-4.185099,-2.8997297]
[{"$nulls":25},"Os12g0115700","Os12g0115700",2.4840095,0,null,"Os05g0501300",2.29165,"Os05g0193800",1.1857694,{"$nulls":81},"ARF6B","OsARF6b, OsARF25, ARF25","AUXIN RESPONSE FACTOR 6B","auxin response factor-6B, auxin response factor 6B, auxin response factor-25, auxin response factor 25",12," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0009630 - gravitropism, GO:0009733 - response to auxin stimulus, GO:0009926 - auxin polar transport, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress","TO:0000567 - tiller angle, TO:0002693 - gravity response trait, TO:0000734 - grain length, TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000207 - plant height","PO:0020039 - leaf lamina , PO:0009005 - root , PO:0025034 - leaf ","Os12g0613700","LOC_Os12g41950.1"]
[{"$nulls":25},"Os07g0437500","Os07g0437500",2.4222035,0,null,"Os08g0566400",2.2904994,"Os04g0611800",1.1875777,{"$nulls":81},"MIR167D","miR167d, osa-miRNA167d, osa-miR167d, osa-miR167d-3p, osa-miR167d-5p","MICRORNA167D","MICRORNA167d",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage","TO:0000074 - blast disease, TO:0000429 - salt sensitivity, TO:0000175 - bacterial blight disease resistance"]
[{"$nulls":25},"Os07g0681300","Os07g0681300",2.3521602,0,null,"Os02g0790600",2.2869902,"Os08g0424500",1.1904254,{"$nulls":81},"ARF5","OsARF5","AUXIN RESPONSE FACTOR 5","auxin response factor-5, auxin response factor 5",2," Tolerance and resistance - Disease resistance,  Other","GO:0005634 - nucleus, GO:0009734 - auxin mediated signaling pathway, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0051607 - defense response to virus, GO:0050687 - negative regulation of defense response to virus","TO:0000148 - viral disease resistance",null,"Os02g0141100","LOC_Os02g04810.1"]
[{"$nulls":25},"Os07g0658700","Os07g0658700",2.2179806,0,null,"Os03g0286500",2.2833679,"Os03g0184000",1.19653,{"$nulls":81},"ARF24","OsARF24","AUXIN RESPONSE FACTOR 24","auxin response factor-24, auxin response factor 24",12," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0010227 - floral organ abscission, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009415 - response to water, GO:0006350 - transcription, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0009911 - positive regulation of flower development, GO:0048481 - ovule development, GO:0010150 - leaf senescence, GO:0010047 - fruit dehiscence, GO:0009734 - auxin mediated signaling pathway, GO:0008285 - negative regulation of cell proliferation","TO:0000276 - drought tolerance, TO:0000043 - root anatomy and morphology trait, TO:0000237 - water stress trait",null,"Os12g0479400","LOC_Os12g29520.1, LOC_Os12g29520.5, LOC_Os12g29520.4, LOC_Os12g29520.3, LOC_Os12g29520.2"]
[{"$nulls":25},"Os08g0532700","Os08g0532700",2.0082881,0,null,"Os05g0595000",2.2776248,"Os05g0129000",1.2048731,{"$nulls":81},"RPR1","RPR1*, Rpr1-1, Rpr1, RPM1, OsRPM1, OsRSR1, RSR1","RICE PROBENAZOL RESPONSIBLE 1","rice probenazol responsible 1",11," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0043531 - ADP binding, GO:0050832 - defense response to fungus, GO:0009405 - pathogenesis, GO:0006952 - defense response, GO:0009410 - response to xenobiotic stimulus","TO:0000605 - hydrogen peroxide content, TO:0000255 - sheath blight disease resistance",null,"Os11g0229500","LOC_Os11g12340.1, LOC_Os11g12340.2"]
[{"$nulls":25},"Os02g0467000","Os02g0467000",1.9195677,0,null,"Os01g0283300",2.2759004,"Os01g0227100",1.207028,{"$nulls":81},"VP1","Vp1* (OSVP1), OsVP1, OsVp1, Vp1, ABI3, OsABI3, OsLFL4, OsVp-1, OSVP1","VIVIPAROUS 1","Viviparous-1, Protein viviparous homolog, B3 domain-containing protein VP1, Transcription activator VP1-rice, LEAFY COTYLEDON 2 and FUSCA 3-LIKE 4",1," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination","GO:0005634 - nucleus, GO:0009733 - response to auxin stimulus, GO:0009845 - seed germination, GO:0017163 - basal transcription repressor activity, GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0045449 - regulation of transcription, GO:0009414 - response to water deprivation, GO:0034059 - response to anoxia, GO:0009737 - response to abscisic acid stimulus, GO:0009790 - embryonic development, GO:0009738 - abscisic acid mediated signaling, GO:0003677 - DNA binding","TO:0000619 - vivipary, TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0000253 - seed dormancy, TO:0000615 - abscisic acid sensitivity","PO:0007057 - 0 seed germination stage , PO:0009010 - seed ","Os01g0911700","LOC_Os01g68370.4, LOC_Os01g68370.3, LOC_Os01g68370.2, LOC_Os01g68370.1"]
[{"$nulls":25},"Os02g0626100","Os02g0626100",1.7492199,0,null,"Os05g0498300",2.2618573,"Os08g0299000",1.2137965,{"$nulls":81},"BPH12","bph12","BROWN PLANT HOPPER RESISTANT 12","brown planthopper resistance 12",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance","PO:0009005 - root "]
[{"$nulls":25},"Os06g0242600","Os06g0242600",1.6493307,0,null,"Os01g0883900",2.258114,"Os01g0113200",1.2218553,{"$nulls":81},"XA25","Xa25(t), Xa25*, Xa25, Xa-25(t)","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 25","Xanthomonas oryzae pv. oryzae resistance 25, Xanthomonas oryzae pv. oryzae resistance-25, Xanthomonas campestris pv. oryzae resistance-25",null," Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance"]
[{"$nulls":25},"Os08g0484500","Os08g0484500",1.5628654,0,null,"Os01g0882500",2.2429876,"Os07g0481000",1.2245995,{"$nulls":81},"qGRH-2","qGRH-2","Green rice leafhopper resistance (QTL)-2","Green rice leafhopper resistance (QTL)-2",2," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os05g0553000","Os05g0553000",1.4122492,0,null,"Os02g0713250",2.2401454,"Os06g0687450",1.2349845,{"$nulls":81},"qOVA1-3","qOVA1-3, qOVA-1-3(t)","Whitebacked planthopper resistance (QTL)-1-3(t)　ovicidal response to the WBPH by watery lesion","Whitebacked planthopper resistance (QTL)-1-3(t)　ovicidal response to the WBPH by watery lesion",1," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os02g0644700","Os02g0644700",1.3246292,0,null,"Os09g0459200",2.2374077,"Os06g0140700",1.2395021,{"$nulls":81},"qLTG-4-1(t)","qLTG-4-1(t)","Low temperature germinability (QTL)-4-1(t)","Low temperature germinability (QTL)-4-1(t)",4," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os10g0524400","Os10g0524400",1.2885752,0,null,"Os09g0543100",2.2333329,"Os10g0369950",1.2420415,{"$nulls":81},"RSUS3","RSus3(t), SUS3, SS3, OsScS3, RSs3, RSus3, OsSUS3, RSS3, OsEnS-111, Susy3, OsSusy3","SUCROSE SYNTHASE 3","Rice sucrose synthase-3(t), Sucrose synthase 3, Sucrose-UDP glucosyltransferase 3, Sucrose synthase-3, rice SuSy gene 3, endosperm-specific gene 111",7," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Seed - Morphological traits,  Seed - Morphological traits - Endosperm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051781 - positive regulation of cell division, GO:0030244 - cellulose biosynthetic process, GO:0009555 - pollen development, GO:0010581 - regulation of starch biosynthetic process, GO:0009960 - endosperm development, GO:0010410 - hemicellulose metabolic process, GO:0052324 - cell wall cellulose biosynthetic process, GO:0005773 - vacuole, GO:0046686 - response to cadmium ion, GO:0051321 - meiotic cell cycle, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress, GO:0010229 - inflorescence development, GO:0009409 - response to cold, GO:0009413 - response to flooding, GO:0009058 - biosynthetic process, GO:0005985 - sucrose metabolic process, GO:0048316 - seed development, GO:0009723 - response to ethylene stimulus, GO:0009873 - ethylene mediated signaling pathway, GO:0016157 - sucrose synthase activity","TO:0000173 - ethylene sensitivity, TO:0000575 - endosperm related trait, TO:0000457 - total biomass yield, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000397 - grain size, TO:0000391 - seed size, TO:0000592 - 1000-dehulled grain weight, TO:0000449 - grain yield per plant, TO:0000734 - grain length, TO:0000068 - lodging incidence, TO:0000696 - starch content, TO:0000396 - grain yield, TO:0000114 - flooding related trait, TO:0000590 - grain weight","PO:0001007 - pollen development stage , PO:0009089 - endosperm , PO:0007633 - endosperm development stage , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os07g0616800","LOC_Os07g42490.2, LOC_Os07g42490.1"]
[{"$nulls":25},"Os03g0115500","Os03g0115500",1.1783904,0,null,"Os04g0437000",2.2227905,"Os12g0136600",1.249976,{"$nulls":81},"SUT5","OsSUT5(t), OsSUT5Z, OsSUT5","SUCROSE TRANSPORTER 5","sucrose transporter5(t), sucrose transporter 5Z",2," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Disease resistance","GO:0042950 - salicin transmembrane transporter activity, GO:0042951 - arbutin transmembrane transporter activity, GO:0015770 - sucrose transport, GO:0009555 - pollen development, GO:0008506 - sucrose:hydrogen symporter activity, GO:0005887 - integral to plasma membrane, GO:0005364 - maltose:hydrogen symporter activity, GO:0008515 - sucrose transmembrane transporter activity, GO:0002215 - defense response to nematode","TO:0000053 - pollen sterility, TO:0000384 - nematode damage resistance","PO:0001007 - pollen development stage ","Os02g0576600","LOC_Os02g36700.1"]
[{"$nulls":25},"Os06g0199500","Os06g0199500",1.1337132,0,null,"Os08g0138400",2.2196858,"Os06g0638100",1.2513117,{"$nulls":81},"NAC3","OsNAC3, NAC67, ONAC067, OnNAC3*, OsNAC3/ONAC067, DLN180, OsDLN180","NAC DOMAIN-CONTAINING PROTEIN 3","NAC 3, OsNAC gene-3, ONNAC GENE 3, NAC domain-containing protein 67, DLN repressor 180, DLN motif protein 180",7," Biochemical character,  Vegetative organ - Shoot apical meristem(SAM),  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0006350 - transcription, GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0045449 - regulation of transcription, GO:0009738 - abscisic acid mediated signaling, GO:0004812 - aminoacyl-tRNA ligase activity, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000524 - submergence tolerance, TO:0000608 - sodium content, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity","PO:0020104 - leaf sheath , PO:0009005 - root ","Os07g0225300","LOC_Os07g12340.1"]
[{"$nulls":25},"Os01g0311800","Os01g0311800",0.9909585,0,null,"Os02g0176700",2.2043464,"Os08g0483200",1.2590462,{"$nulls":81},"qCMS-3-1(t) (QCMS3.1)","qCMS-3-1(t) (QCMS3.1)","cell membrane stability (QTL)-3-1(t)","cell membrane stability (QTL)-3-1(t)",3," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os01g0222500","Os01g0222500",-0.95046663,0,null,"Os09g0479600",2.2017207,"Os05g0588250",1.2635828,{"$nulls":81},"qCMS-11-1(t) (QCMS11.1)","qCMS-11-1(t) (QCMS11.1)","cell membrane stability (QTL)-11-1(t)","cell membrane stability (QTL)-11-1(t)",11," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os12g0583000","Os12g0583000",-0.9505329,0,null,"Os08g0117000",2.2007215,"Os01g0277100",1.2643794,{"$nulls":81},"qCMS-12-1(t) (QCMS12.1)","qCMS-12-1(t) (QCMS12.1)","cell membrane stability (QTL)-12-1(t)","cell membrane stability (QTL)-12-1(t)",12," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os02g0196900","Os02g0196900",-0.9888069,0,null,"Os12g0139300",2.1976068,"Os07g0630900",1.2711644,{"$nulls":81},"qBLSR-3-4 (qBlsr3d)","qBLSR-3-4 (qBlsr3d)","bacterial leaf streak resistance (QTL)-3-4","bacterial leaf streak resistance (QTL)-3-4",3," Tolerance and resistance - Disease resistance"]
[{"$nulls":25},"Os06g0708100","Os06g0708100",-1.0025129,0,null,"Os11g0116300",2.1951735,"Os01g0757800",1.2776455,{"$nulls":81},"qBLSR-5-2 (qBlsr5b)","qBLSR-5-2 (qBlsr5b)","bacterial leaf streak resistance (QTL)-5-2","bacterial leaf streak resistance (QTL)-5-2",5," Tolerance and resistance - Disease resistance"]
[{"$nulls":25},"Os01g0834200","Os01g0834200",-1.0297617,0,null,"Os04g0685900",2.1874247,"Os04g0435700",1.2835745,{"$nulls":81},"qSB-9-2","qSB-9-2","sheath blight resistance (QTL)-9-2","sheath blight resistance (QTL)-9-2",9," Tolerance and resistance - Disease resistance"]
[{"$nulls":25},"Os08g0176100","Os08g0176100",-1.0816911,0,null,"Os04g0583800",2.1791604,"Os12g0578400",1.2891626,{"$nulls":81},"qBPHR-1 (QBphr1)","qBPHR-1 (QBphr1)","brown planthopper resistance (QTL)-1","brown planthopper resistance (QTL)-1",1," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os02g0141300","Os02g0141300",-1.0960606,0,null,"Os07g0607400",2.177159,"Os04g0670200",1.2948819,{"$nulls":81},"qBPHR-8 (QBphr8)","qBPHR-8 (QBphr8)","brown planthopper resistance (QTL)-8","brown planthopper resistance (QTL)-8",8," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os07g0558200","Os07g0558200",-1.1511755,0,null,"Os03g0704000",2.175912,"Os05g0252100",1.2977341,{"$nulls":81},"RSB1","Rsb1, Rsb1*, RRS3","SHEATH BLIGHT RESISTANCE 1","rice sheath blight resistance1, rice sheath blight resistance 1, Rhizoctonia solani (sheath blight) resistance-3, Sheath blight resistance-3",5," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000255 - sheath blight disease resistance","PO:0020104 - leaf sheath "]
[{"$nulls":25},"Os11g0484400","Os11g0484400",-1.188326,0,null,"Os04g0669300",2.1683915,"Os09g0130800",1.3053354,{"$nulls":81},"qALRR-7-1 (QAlRr7.1)","qALRR-7-1 (QAlRr7.1)","relative root length (QTL)-7-1","relative root length (QTL)-7-1",7," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os03g0115100","Os03g0115100",-1.2169706,0,null,"Os02g0180000",2.1630628,"Os12g0178633",1.3121089,{"$nulls":81},"PI25","Pi25(t), Pi-25(t)","PYRICULARIA ORYZAE RESISTANCE 25","Pyricularia oryzae resistance-25(t), Blast resistance 25, Blast resistance 25",2," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus"]
[{"$nulls":25},"Os01g0375200","Os01g0375200",-1.2716187,0,null,"Os04g0462300",2.1525512,"Os12g0619000",1.3225497,{"$nulls":81},"qCTB-3(t) (qCTB3)","qCTB-3(t) (qCTB3)","cold resistance (QTL)-3(t)","cold resistance (QTL)-3(t)",3," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os07g0102000","Os07g0102000",-1.2880712,0,null,"Os04g0582700",2.1480992,"Os02g0669000",1.3259596,{"$nulls":81},"IM1","OsIM1, OsIM1a, OsIM2, OsIM, PTOX1","OSIMASE","OsIMase, plastid terminal oxidase 1",4," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009579 - thylakoid, GO:0022900 - electron transport chain, GO:0016117 - carotenoid biosynthetic process, GO:0009916 - alternative oxidase activity, GO:0007585 - respiratory gaseous exchange, GO:0070469 - respiratory chain, GO:0009507 - chloroplast, GO:0009688 - abscisic acid biosynthetic process, GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding, GO:0009651 - response to salt stress, GO:0009657 - plastid organization","TO:0000329 - tillering ability, TO:0000615 - abscisic acid sensitivity, TO:0002639 - shoot branching, TO:0006001 - salt tolerance, TO:0000207 - plant height, TO:0002667 - abscisic acid content, TO:0002672 - auxin content, TO:0000478 - abscisic acid concentration, TO:0000069 - variegated leaf",null,"Os04g0668900","LOC_Os04g57320.1, LOC_Os04g57320.2"]
[{"$nulls":25},"Os10g0135600","Os10g0135600",-1.3194369,0,null,"Os03g0784700",2.144703,"Os12g0267200",1.3299226,{"$nulls":81},"SPL12","Spl12(t), Spl12*, Spl12","SPOTTED LEAF 12","Spotted leaf12(t), Spotted leaf-12, spotted leaf 12",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000207 - plant height, TO:0000063 - mimic response","PO:0000003 - whole plant , PO:0009011 - plant structure "]
[{"$nulls":25},"Os01g0764600","Os01g0764600",-1.3425859,0,null,"Os09g0283600",2.1427352,"Os05g0324100",1.3304576,{"$nulls":81},"SPL15","Spl15(t), Spl15*, Spl15","SPOTTED LEAF 15","Spotted leaf15(t), Spotted leaf-15, Spotted leaf 15",null," Vegetative organ - Culm,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response","TO:0000063 - mimic response, TO:0000207 - plant height","PO:0000003 - whole plant , PO:0009011 - plant structure "]
[{"$nulls":25},"Os03g0845500","Os03g0845500",-1.3828007,0,null,"Os03g0309800",2.1353996,"Os01g0618100",1.3380041,{"$nulls":81},"GSTZ2","OsGSTZ2, GSTZ-2","ZETA GLUTATHIONE S-TRANSFERASE 2","glutathione S-transferase2, glutathione S-transferase 2, Glutathione S-transferase (GSTZ)-2, Glutathione S-transferase-2, glutathione transferase Z2",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity, GO:0009409 - response to cold, GO:0016740 - transferase activity, GO:0004364 - glutathione transferase activity, GO:0009072 - aromatic amino acid family metabolic process, GO:0005737 - cytoplasm","TO:0000303 - cold tolerance",null,"Os12g0210300","LOC_Os12g10730.1, LOC_Os12g10730.2"]
[{"$nulls":25},"Os03g0231800","Os03g0231800",-1.4873405,0,null,"Os09g0298100",2.1312063,"Os01g0233000",1.3461937,{"$nulls":81},"qRNC-9(t)","qRNC-9(t)","root Na+ concentration (QTL)-9(t)","root Na+ concentration (QTL)-9(t)",9," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os06g0207000","Os06g0207000",-1.5278643,0,null,"Os05g0568600",2.127479,"Os02g0318600",1.3554854,{"$nulls":81},"PI34","Pi34, RMg71, Pi24(t)","PYRICULARIA ORYZAE RESISTANCE 34","Pyricularia oryzae resistance 34, Magnaporthe grisea resistance 34, Blast resistance 34",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus"]
[{"$nulls":25},"Os03g0709000","Os03g0709000",-1.5608157,0,null,"Os07g0673900",2.1234548,"Os01g0802000",1.3565899,{"$nulls":81},"qLTG-2-2(t) (qLTG-2)","qLTG-2-2(t) (qLTG-2)","low temperature germinability (QTL)-2-2(t)","low temperature germinability (QTL)-2-2(t)",2," Tolerance and resistance - Stress tolerance"]
[{"$nulls":25},"Os03g0689300","Os03g0689300",-1.6003475,0,null,"Os08g0545700",2.1197512,"Os01g0120300",1.3658978,{"$nulls":81},"EXPA1","OsEXP1, EXPA1, OsEXPA1, OsaEXPa1.16, RiExA","ALPHA-EXPANSIN 1","Rice expansin-1, Expansin-A1, Alpha-expansin-1, Expansin S2",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0009664 - plant-type cell wall organization, GO:0019898 - extrinsic to membrane, GO:0008083 - growth factor activity, GO:0016023 - cytoplasmic membrane-bounded vesicle, GO:0007047 - cell wall organization, GO:0005576 - extracellular region",null,null,"Os04g0228400","LOC_Os04g15840.1"]
[{"$nulls":25},"Os02g0274100","Os02g0274100",-1.6256365,0,null,"Os06g0295900",2.1187875,"Os10g0468950",1.3715407,{"$nulls":81},"EXPA4","OsEXP4 (Os-EXP4), OsEXPA4, OsEXP4, Os-EXP4, OsaEXPa1.22","ALPHA-EXPANSIN 4","Rice expansin-4, Expansin-A4, Alpha-expansin-4",5," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0019898 - extrinsic to membrane, GO:0008083 - growth factor activity, GO:0048364 - root development, GO:0005576 - extracellular region, GO:0005618 - cell wall, GO:0007047 - cell wall organization, GO:0009664 - plant-type cell wall organization","TO:0000615 - abscisic acid sensitivity, TO:0000656 - root development trait, TO:0000306 - root thickness, TO:0000227 - root length","PO:0007520 - root development stage , PO:0009005 - root ","Os05g0477600","LOC_Os05g39990.1"]
[{"$nulls":25},"Os02g0168100","Os02g0168100",-1.6955171,0,null,"Os11g0693800",2.1149905,"Os04g0538100",1.376009,{"$nulls":81},"qRBR-1-4 (t) (rbr1d)","qRBR-1-4 (t) (rbr1d)","Pyricularia grisea resistance (QTL)-1-4(t)","Pyricularia grisea resistance (QTL)-1-4(t)",1," Tolerance and resistance - Disease resistance"]
[{"$nulls":25},"Os06g0652300","Os06g0652300",-1.7968775,0,null,"Os10g0504100",2.1055048,"Os08g0105800",1.3801135,{"$nulls":81},"qRBR-9-1 (t) (rbr9a)","qRBR-9-1 (t) (rbr9a)","Pyricularia grisea resistance (QTL)-9-1 (t)","Pyricularia grisea resistance (QTL)-9-1 (t)",9," Tolerance and resistance - Disease resistance"]
[{"$nulls":25},"Os07g0661100","Os07g0661100",-1.8714536,0,null,"Os09g0518900",2.101123,"Os05g0105600",1.3894128,{"$nulls":81},"CDR1","cdr1, cdr1*","CELL DEATH AND RESISTANCE 1","cell death and resistance1",null," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0006952 - defense response, GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000063 - mimic response","PO:0009025 - vascular leaf "]
[{"$nulls":25},"Os11g0707600","Os11g0707600",-1.9166397,0,null,"Os01g0290600",2.0990968,"Os07g0425000",1.3912657,{"$nulls":81},"CDPK7","OsCDPK7, OsCPK7, CDPK1, OsCDPK11, CDPK12, OsCDPK13","CALCIUM-DEPENDENT PROTEIN KINASE 7","calcium dependent protein kinase",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0016020 - membrane, GO:0005509 - calcium ion binding, GO:0009609 - response to symbiotic bacterium, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0004672 - protein kinase activity, GO:0009751 - response to salicylic acid stimulus","TO:0006001 - salt tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000303 - cold tolerance","PO:0006085 - root meristem , PO:0000016 - lateral root primordium , PO:0005029 - root primordium , PO:0007633 - endosperm development stage ","Os03g0128700","LOC_Os03g03660.4, LOC_Os03g03660.3, LOC_Os03g03660.2, LOC_Os03g03660.1"]
[{"$nulls":25},"Os01g0372400","Os01g0372400",-2.1909926,0,null,"Os03g0124800",2.092244,"Os02g0241600",1.3957996,{"$nulls":81},"GRH5","Grh5","GREEN RICE LEAFHOPPER RESISTANCE 5","Green rice leafhopper resistance5, Green rice leafhopper resistance 5, Green rice leafhopper resistance-5",8," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000212 - green leafhopper resistance","PO:0000003 - whole plant , PO:0009011 - plant structure "]
[{"$nulls":25},"Os06g0611400","Os06g0611400",-2.2680857,0,null,"Os06g0133800",2.0900714,"Os01g0904200",1.3979836,{"$nulls":81},"qGWL-5","qGWL-5","grade of watery lesions (QTL)-5","grade of watery lesions (QTL)-5",5," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os11g0644800","Os11g0644800",-2.4111602,0,null,"Os01g0763700",2.087693,"Os07g0277600",1.4038221,{"$nulls":81},"qEM-7-2","qEM-7-2","egg mortality (QTL)-7-2","egg mortality (QTL)-7-2",7," Tolerance and resistance - Insect resistance"]
[{"$nulls":25},"Os06g0678200","Os06g0678200",-2.510255,0,null,"Os12g0263000",2.0778656,"Os05g0137800",1.4112381,{"$nulls":81},"EIN2","OsEIN2, MHZ7/OsEIN2, OsEIN2/MHZ7, MHZ7","ETHYLENE-INSENSITIVE PROTEIN 2","Ethylene-insensitive protein 2, maohuzi7, maohuzi 7",7," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009723 - response to ethylene stimulus, GO:0052319 - regulation of phytoalexin biosynthetic process, GO:0016020 - membrane, GO:0031349 - positive regulation of defense response, GO:0009814 - defense response, incompatible interaction, GO:0009873 - ethylene mediated signaling pathway, GO:0009651 - response to salt stress, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0048364 - root development, GO:0010150 - leaf senescence, GO:0002213 - defense response to insect, GO:0005215 - transporter activity, GO:0051607 - defense response to virus","TO:0000429 - salt sensitivity, TO:0000544 - mesocotyl length, TO:0000397 - grain size, TO:0000249 - leaf senescence, TO:0001007 - coleoptile length, TO:0000112 - disease resistance, TO:0000424 - brown planthopper resistance, TO:0000148 - viral disease resistance, TO:0000615 - abscisic acid sensitivity, TO:0000173 - ethylene sensitivity, TO:0000227 - root length",null,"Os07g0155600","LOC_Os07g06130.3, LOC_Os07g06130.2, LOC_Os07g06130.1"]
[{"$nulls":25},"Os01g0930900","Os01g0930900",-2.7168105,0,null,"Os09g0423200",2.073212,"Os12g0549700",1.4161307,{"$nulls":81},"MADS4","OsMADS4, PI1, DLN140, OsDLN140","MADS BOX GENE 4","MADS box gene4, MADS-box transcription factor 4, GLOBOSA(GLO)-like MADS-box gene-4, DLN repressor 140, DLN motif protein 140",5," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006350 - transcription, GO:0009908 - flower development, GO:0010229 - inflorescence development, GO:0043565 - sequence-specific DNA binding, GO:0030154 - cell differentiation","TO:0000499 - flower anatomy and morphology trait, TO:0000621 - inflorescence development trait, TO:0000622 - flower development trait","PO:0009046 - flower , PO:0007615 - flower development stage , PO:0001083 - inflorescence development stage ","Os05g0423400","LOC_Os05g34940.3, LOC_Os05g34940.2, LOC_Os05g34940.1"]
[{"$nulls":25},"Os02g0731900","Os02g0731900",-2.9409494,0,null,"Os09g0439800",2.0700114,"Os03g0229000",1.4234923,{"$nulls":81},"MADS22","OsMADS22, RMD1, DLN68, OsDLN68","MADS BOX GENE 22","MADS box gene22, MADS-box transcription factor 22, STMADS11-like, DLN repressor 68, DLN motif protein 68",2," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0010229 - inflorescence development, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0009908 - flower development, GO:0007275 - multicellular organismal development, GO:0003677 - DNA binding, GO:0006350 - transcription","TO:0000485 - sterility related trait, TO:0000621 - inflorescence development trait, TO:0001000 - glume cover, TO:0000079 - lemma and palea anatomy and morphology trait, TO:0000670 - floret number","PO:0004705 - stamen primordium , PO:0006004 - upper glume , PO:0009082 - spikelet floret , PO:0009009 - plant embryo , PO:0009036 - lodicule , PO:0009037 - lemma , PO:0009038 - palea , PO:0009049 - inflorescence , PO:0009051 - spikelet , PO:0001083 - inflorescence development stage , PO:0000230 - inflorescence meristem ","Os02g0761000","LOC_Os02g52340.1"]
[{"$nulls":25},"Os10g0529500","Os10g0529500",-3.4261866,0,null,"Os10g0183000",2.0630715,"Os04g0382300",1.4266669,{"$nulls":81},"MADS30","OsMADS30","MADS BOX GENE 30","MADS box gene30, MADS-box transcription factor 30",6," Tolerance and resistance - Stress tolerance,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0006350 - transcription, GO:0043565 - sequence-specific DNA binding, GO:0003700 - transcription factor activity",null,null,"Os06g0667200","LOC_Os06g45650.1"]
[{"$nulls":25},"Os07g0209100","Os07g0209100",-4.2637835,0,null,"Os12g0569300",2.059354,"Os06g0486800",1.4346266,{"$nulls":81},"DREB1D","OsDREB1D, CBF4, ERF116, OsERF#116, OsERF116, AP2/EREBP#054, AP2/EREBP54, OsCbf1, OsCBF1","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D","Dehydration-responsive element-binding protein 1D, Protein DREB1D, Protein C-repeat-binding factor 4, ethylene response factor 116, APETALA2/ethylene-responsive element binding protein 54",6," Tolerance and resistance - Stress tolerance,  Other","GO:0006350 - transcription, GO:0006355 - regulation of transcription, DNA-dependent, GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0006950 - response to stress",null,null,"Os06g0165600","LOC_Os06g06970.1"]
[{"$nulls":25},"Os07g0249900","Os07g0249900",-2.08955,0,null,"Os04g0583200",2.0497277,"Os02g0101300",1.4431843,{"$nulls":81},"CRY1A","OsCRY1a, OsCRY1, CRY1a, CRY2","CRYPTOCHROME 1A","cryptochrome 1a, Blue-light-receptor cryptochrome 1",2," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010075 - regulation of meristem growth, GO:0009882 - blue light photoreceptor activity, GO:0009785 - blue light signaling pathway, GO:0009881 - photoreceptor activity, GO:0007623 - circadian rhythm, GO:0006281 - DNA repair, GO:0009414 - response to water deprivation, GO:0009583 - detection of light stimulus, GO:0055114 - oxidation reduction, GO:0010118 - stomatal movement, GO:0009637 - response to blue light, GO:0010343 - singlet oxygen-mediated programmed cell death, GO:0010617 - circadian regulation of calcium ion oscillation, GO:0051510 - regulation of unidimensional cell growth, GO:0046777 - protein amino acid autophosphorylation, GO:0009640 - photomorphogenesis, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0005524 - ATP binding, GO:0046283 - anthocyanin metabolic process, GO:0003913 - DNA photolyase activity, GO:0004672 - protein kinase activity, GO:0010224 - response to UV-B","TO:0000159 - blue light sensitivity, TO:0002689 - leaf sheath length, TO:0000601 - UV-B light sensitivity, TO:0002675 - gibberellic acid content",null,"Os02g0573200","LOC_Os02g36380.1, LOC_Os02g36380.2"]
[{"$nulls":25},"Os09g0500900","Os09g0500900",2.7962372,0,null,"Os07g0604700",2.048456,"Os12g0607000",1.4469929,{"$nulls":81},"BHLH133","OsbHLH133, bHLH133, OsRSL8, RSL8","BASIC HELIX-LOOP-HELIX PROTEIN 133","basic helix-loop-helix protein 133, ROOT HAIR DEFECTIVE-SIX LIKE 8",12," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0034059 - response to anoxia",null,null,"Os12g0508500","LOC_Os12g32400.1"]
[{"$nulls":25},"Os03g0169000","Os03g0169000",1.5558138,0,null,"Os12g0576600",2.042234,"Os01g0723400",1.4522462,{"$nulls":81},"IDI4","OsIDI4","IRON-DEFICIENCY-INDUCED PROTEIN 4","Aminotransferase OsIDI4, Fe-deficiency-induced protein 4",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009058 - biosynthetic process, GO:0030170 - pyridoxal phosphate binding, GO:0010106 - cellular response to iron ion starvation, GO:0034224 - cellular response to zinc ion starvation, GO:0019509 - methionine salvage, GO:0008483 - transaminase activity, GO:0042594 - response to starvation, GO:0016829 - lyase activity","TO:0000351 - zinc sensitivity, TO:0000224 - iron sensitivity",null,"Os09g0453800","LOC_Os09g28050.1, LOC_Os09g28050.2, LOC_Os09g28050.3"]
[{"$nulls":25},"Os07g0282500","Os07g0282500",3.1807296,0,null,"Os01g0707500",2.0354517,"Os04g0612500",1.4602467,{"$nulls":81},"XB15","XB15, OsPP2C35, PP2C35, OsPP59, SIP35","XA21 BINDING PROTEIN 15","XA21 binding protein 15, protein phosphatase 2C35, protein phosphatase 2C 35, protein phosphatase 59, SKIP interacting protein 35, SKIPa-interacting protein 35, SKIPa-interacting protein 35",3," Seed,  Tolerance and resistance - Disease resistance","GO:0005886 - plasma membrane, GO:0006952 - defense response, GO:0048366 - leaf development, GO:0046872 - metal ion binding, GO:0042742 - defense response to bacterium, GO:0008152 - metabolic process, GO:0007165 - signal transduction, GO:0004721 - phosphoprotein phosphatase activity","TO:0000620 - embryo development trait, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance",null,"Os03g0821300","LOC_Os03g60650.1"]
[{"$nulls":25},"Os11g0602300","Os11g0602300",1.1735882,0,null,"Os08g0428400",2.029749,"Os02g0526000",1.467134,{"$nulls":81},"SPX6","OsSPX6","SPX DOMAIN PROTEIN 6","SPX (SYG/PHO81/XPR1) domain gene 6, SPX domain protein 6",7," Tolerance and resistance - Stress tolerance","GO:0042594 - response to starvation, GO:0070417 - cellular response to cold",null,null,"Os07g0614700"]
[{"$nulls":25},"Os06g0255100","Os06g0255100",-2.2728405,0,null,"Os10g0169400",2.0233624,"Os02g0808100",1.4700646,{"$nulls":81},"HAG703","OsHAG703, OsELP3, ELP3","HISTONE ACETYLTRANSFERASE HAG703","Histone acetyltransferase HAG703",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding, GO:0051536 - iron-sulfur cluster binding, GO:0009294 - DNA mediated transformation, GO:0008283 - cell proliferation, GO:0009414 - response to water deprivation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0048366 - leaf development, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0004402 - histone acetyltransferase activity, GO:0035265 - organ growth, GO:0016573 - histone acetylation","TO:0000615 - abscisic acid sensitivity, TO:0000655 - leaf development trait, TO:0002681 - leaf curling, TO:0000370 - leaf width, TO:0000276 - drought tolerance","PO:0001050 - leaf development stage ","Os04g0484900","LOC_Os04g40840.1"]
[{"$nulls":25},"Os03g0618300","Os03g0618300",-3.073156,0,null,"Os01g0520180",2.0178695,"Os05g0460800",1.4790215,{"$nulls":81},"AHA8","OSA8, OsA8, A8, osAHA8, AHA8, Os-HA1, OsHA1","H+-ATPASE 8","plasma membrane H+-ATPase 8, PM H+-ATPase 8, plasma membrane H+ P-Type ATPase 8, H+-ATPase 1",3," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009566 - fertilization, GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0010167 - response to nitrate, GO:0006754 - ATP biosynthetic process, GO:0006812 - cation transport, GO:0046872 - metal ion binding","TO:0000078 - root dry weight, TO:0000227 - root length",null,"Os03g0100800","LOC_Os03g01120.1"]
[{"$nulls":25},"Os09g0570800","Os09g0570800",2.240189,0,null,"Os07g0570700",2.0166998,"Os11g0170200",1.4816203,{"$nulls":81},"SPS8","OsSPS8, OsSPS4, SPS4","SUCROSE PHOSPHATE SYNTHASE 8","sucrose phosphate synthase 8",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0046524 - sucrose-phosphate synthase activity, GO:0009409 - response to cold, GO:0005986 - sucrose biosynthetic process","TO:0000303 - cold tolerance",null,"Os08g0301500","LOC_Os08g20660.1, LOC_Os08g20660.2"]
[{"$nulls":25},"Os09g0305300","Os09g0305300",1.7348467,0,null,"Os02g0764700",2.0155592,"Os03g0197125",1.4838418,{"$nulls":81},"_","OsPR2, Gns1, OsEGL1","_","(1,3;1,4)-b-glucanase, (1,3;1,4)-beta-glucanase, pathogenesis-related gene 2, endo-(1,3;1,4)-beta-glucanase 1",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005773 - vacuole, GO:0009409 - response to cold, GO:0009817 - defense response to fungus, incompatible interaction, GO:0005886 - plasma membrane, GO:0009617 - response to bacterium, GO:0005975 - carbohydrate metabolic process, GO:0010332 - response to gamma radiation, GO:0005618 - cell wall, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0009651 - response to salt stress, GO:0048046 - apoplast, GO:0043169 - cation binding, GO:0050832 - defense response to fungus","TO:0000173 - ethylene sensitivity, TO:0000168 - abiotic stress trait, TO:0000179 - biotic stress trait, TO:0000074 - blast disease, TO:0000401 - plant growth hormone sensitivity, TO:0000167 - cytokinin sensitivity",null,"Os05g0375400","LOC_Os05g31140.1, LOC_Os05g31140.2, LOC_Os05g31140.3"]
[{"$nulls":25},"Os07g0471900","Os07g0471900",2.0470483,0,null,"Os03g0199100",2.0131304,"Os07g0549600",1.4914767,{"$nulls":81},"ODCB","ODCb, OsODC3, ODC3, OsODC1, ODC1","ORNITHINE DECARBOXYLASE B","Ornithine decarboxylase b, ornithine decarboxylase 3",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0006596 - polyamine biosynthetic process, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os02g0482400","LOC_Os02g28110.1"]
[{"$nulls":25},"Os06g0216000","Os06g0216000",-4.022122,0,null,"Os01g0310600",2.0098245,"Os06g0295900",1.4968284,{"$nulls":81},"NHX4","OsNHX4","NA+/H+ ANTIPORTER 4","Na+/H+ antiporter 4, NHX-type antiporter 4",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0015385 - sodium:hydrogen antiporter activity, GO:0016021 - integral to membrane, GO:0006885 - regulation of pH","TO:0006001 - salt tolerance","PO:0020104 - leaf sheath ","Os06g0318500","LOC_Os06g21360.1"]
[{"$nulls":25},"Os06g0329900","Os06g0329900",3.5589755,0,null,"Os07g0474300",2.0051677,"Os01g0972200",1.5007988,{"$nulls":81},"AGP1","OsAGP1","ARABINOGALACTAN PROTEIN 1","Arabinogalactan protein 1",8," Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0032578 - aleurone grain membrane, GO:0031225 - anchored to membrane, GO:0005773 - vacuole, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0008585 - female gonad development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity","PO:0009010 - seed , PO:0001083 - inflorescence development stage , PO:0009073 - stigma , PO:0009072 - plant ovary ","Os08g0482300","LOC_Os08g37630.1"]
[{"$nulls":25},"Os05g0576500","Os05g0576500",-2.5037315,0,null,"Os12g0609500",2.0005157,"Os01g0805200",1.5055958,{"$nulls":81},"AGP23","OsAGP23","ARABINOGALACTAN PROTEIN 23","Arabinogalactan protein 23",5," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os05g0217000","LOC_Os05g12580.1"]
[{"$nulls":25},"Os01g0602400","Os01g0602400",1.3375016,0,null,"Os01g0134500",1.9972857,"Os02g0629101",1.511859,{"$nulls":81},"FLA5","OsFLA5","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5","fasciclin-like AGP 5, fasciclin-like arabinogalactan protein 5",8," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os08g0502400","LOC_Os08g39270.1"]
[{"$nulls":25},"Os08g0152400","Os08g0152400",-1.1503402,0,null,"Os12g0425500",1.9959415,"Os03g0211700",1.5144078,{"$nulls":81},"_","OsSK1","_","Shikimate kinase 1, Shikimate kinase",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004765 - shikimate kinase activity, GO:0009073 - aromatic amino acid family biosynthetic process, GO:0009423 - chorismate biosynthetic process, GO:0009507 - chloroplast, GO:0009411 - response to UV, GO:0019632 - shikimate metabolic process, GO:0046872 - metal ion binding","TO:0000432 - temperature response trait, TO:0000160 - UV light sensitivity",null,"Os02g0749300","LOC_Os02g51410.1, LOC_Os02g51410.2, LOC_Os02g51410.3"]
[{"$nulls":25},"Os10g0171500","Os10g0171500",1.7817173,0,null,"Os02g0537700",1.9904842,"Os06g0155900",1.5230297,{"$nulls":81},"PAP1C","OsPAP1c, NPP4, OsNPP4","PURPLE ACID PHOSPHATASE 1C","purple acid phosphatase 1c, Nucleotide pyrophosphatase/phosphodiesterase 4",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003993 - acid phosphatase activity, GO:0046872 - metal ion binding",null,null,"Os12g0576700","LOC_Os12g38760.1, LOC_Os12g38760.2"]
[{"$nulls":25},"Os01g0627800","Os01g0627800",-2.1354766,0,null,"Os06g0218500",1.9833525,"Os09g0290900",1.5282698,{"$nulls":81},"PAP9B","OsPAP9b","PURPLE ACID PHOSPHATASE 9B","purple acid phosphatase 9b",1," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0003993 - acid phosphatase activity, GO:0006817 - phosphate transport, GO:0046872 - metal ion binding","TO:0002661 - seed maturation, TO:0000102 - phosphorus sensitivity",null,"Os01g0800500","LOC_Os01g58640.1"]
[{"$nulls":25},"Os07g0217600","Os07g0217600",-3.6866255,0,null,"Os12g0572800",1.9785091,"Os06g0107100",1.533256,{"$nulls":81},"PAP15","OsPAP15, OsPAPhy_b, PAPhy_b, OsPHY1","PURPLE ACID PHOSPHATASE 15","purple acid phosphatase 15, purple acid phosphatase phytase b, phytase 1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003993 - acid phosphatase activity, GO:0008152 - metabolic process, GO:0003824 - catalytic activity, GO:0008707 - 4-phytase activity, GO:0009846 - pollen germination, GO:0046872 - metal ion binding, GO:0030170 - pyridoxal phosphate binding, GO:0009845 - seed germination",null,null,"Os03g0848200","LOC_Os03g63074.1, LOC_Os03g63074.2"]
[{"$nulls":25},"Os01g0627500","Os01g0627500",-3.8154628,0,null,"Os03g0323100",1.9764603,"Os08g0440100",1.5349528,{"$nulls":81},"PAP21A","OsPAP21a","PURPLE ACID PHOSPHATASE 21A","purple acid phosphatase 21a",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003993 - acid phosphatase activity, GO:0046872 - metal ion binding",null,null,"Os04g0410600","LOC_Os04g33530.1"]
[{"$nulls":25},"Os11g0289700","Os11g0289700",1.3922324,0,null,"Os02g0648100",1.9717122,"Os12g0168700",1.5418793,{"$nulls":81},"PHGPX","OsGpx2, GPX2, OsGPx02, PHGPX, ricPHGPX, riPHGPX","PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE","glutathione peroxidase 2, phospholipid hydroperoxide glutathione peroxidase",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009793 - embryonic development ending in seed dormancy, GO:0050832 - defense response to fungus, GO:0006979 - response to oxidative stress, GO:0005886 - plasma membrane, GO:0004602 - glutathione peroxidase activity","TO:0000074 - blast disease",null,"Os03g0358100","LOC_Os03g24380.1"]
[{"$nulls":25},"Os05g0200400","Os05g0200400",2.4222753,0,null,"Os01g0559000",1.9710985,"Os09g0266000",1.5426136,{"$nulls":81},"GPX3","OsGpx3, GPX3, OsGPx03","GLUTATHIONE PEROXIDASE 3","glutathione peroxidase 3",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0004602 - glutathione peroxidase activity, GO:0006979 - response to oxidative stress, GO:0009507 - chloroplast, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os02g0664000","LOC_Os02g44500.1"]
[{"$nulls":25},"Os01g0901700","Os01g0901700",1.1496115,0,null,"Os07g0576000",1.9653121,"Os02g0130600",1.5504574,{"$nulls":81},"PAO7","OsPAO7, OsPAO3, PAO3","POLYAMINE OXIDASE 7","Polyamine oxidase 7",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046592 - polyamine oxidase activity, GO:0009651 - response to salt stress, GO:0016491 - oxidoreductase activity, GO:0050660 - FAD binding, GO:0006598 - polyamine catabolic process, GO:0005576 - extracellular region","TO:0006001 - salt tolerance",null,"Os09g0368500","LOC_Os09g20284.1"]
[{"$nulls":25},"Os01g0891300","Os01g0891300",3.0913131,0,null,"Os02g0831000",1.9638821,"Os08g0293100",1.5536636,{"$nulls":81},"GF14F","GF14f, SR14-3-3, OsGF14f, S94, ric1, 14-3-3f","G-BOX FACTOR 14-3-3F PROTEIN","G-box factor 14-3-3f protein, ras-related small GTP-binding protein ric1",3," Reproductive organ - Heading date,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0046686 - response to cadmium ion, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009414 - response to water deprivation, GO:0006588 - activation of tryptophan 5-monooxygenase activity, GO:0009570 - chloroplast stroma, GO:0009651 - response to salt stress, GO:0004623 - phospholipase A2 activity, GO:0005618 - cell wall, GO:0005524 - ATP binding, GO:0008426 - protein kinase C inhibitor activity, GO:0005886 - plasma membrane, GO:0000077 - DNA damage checkpoint, GO:0005739 - mitochondrion, GO:0009737 - response to abscisic acid stimulus, GO:0005635 - nuclear envelope","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0710800","LOC_Os03g50290.1, LOC_Os03g50290.2, LOC_Os03g50290.3"]
[{"$nulls":25},"Os02g0235900","Os02g0235900",-1.1934915,0,null,"Os04g0545000",1.9589577,"Os08g0428400",1.5630218,{"$nulls":81},"PR4C","OsPR4c","PATHOGENESIS-RELATED GENE 4C","pathogenesis-related protein 4c, PR protein 4c",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009627 - systemic acquired resistance, GO:0080027 - response to herbivore, GO:0042742 - defense response to bacterium, GO:0009817 - defense response to fungus, incompatible interaction, GO:0009723 - response to ethylene stimulus, GO:0009651 - response to salt stress, GO:0009615 - response to virus",null,null,"Os11g0592000","LOC_Os11g37950.1"]
[{"$nulls":25},"Os10g0180000","Os10g0180000",1.6284374,0,null,"Os11g0623700",1.9560591,"Os09g0422500",1.567009,{"$nulls":81},"ITPK1","OsITPK1, OsITP5/6K-1, ITP5/6K-1, OsITL2","INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 1","inositol 1, 3, 4-trisphosphate 5/6-kinase 1",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0047325 - inositol tetrakisphosphate 1-kinase activity, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus, GO:0009611 - response to wounding, GO:0032958 - inositol phosphate biosynthetic process, GO:0005737 - cytoplasm, GO:0009651 - response to salt stress, GO:0000287 - magnesium ion binding, GO:0032957 - inositol trisphosphate metabolic process, GO:0005524 - ATP binding","TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os10g0103800","LOC_Os10g01480.1"]
[{"$nulls":25},"Os06g0343600","Os06g0343600",-2.1806374,0,null,"Os04g0379700",1.9535221,"Os08g0522500",1.569142,{"$nulls":81},"_","ONAC001, ONAC1","_","NAC domain-containing protein 001, NAC domain-containing protein 1",9," Tolerance and resistance - Stress tolerance,  Other","GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress, GO:0003677 - DNA binding","TO:0006001 - salt tolerance",null,"Os09g0509100","LOC_Os09g33490.1"]
[{"$nulls":25},"Os06g0342000","Os06g0342000",1.4417406,0,null,"Os10g0370600",1.9415582,"Os05g0521300",1.5769591,{"$nulls":81},"NAC28","ONAC028, ONAC28","NAC DOMAIN-CONTAINING PROTEIN 28","NAC domain-containing protein 028, NAC domain-containing protein 28",2," Tolerance and resistance - Stress tolerance,  Other","GO:0010089 - xylem development, GO:0043067 - regulation of programmed cell death, GO:0048367 - shoot development, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os02g0555300 ","LOC_Os02g34970.1"]
[{"$nulls":25},"Os12g0124400","Os12g0124400",-1.281912,0,null,"Os06g0194900",1.9279588,"Os12g0197500",1.5788475,{"$nulls":81},"NAC40","ONAC040, ONAC40, ONAC054, ONAC54, OsNTL5, NTL5, UCIP17, OsUCIP17","NAC DOMAIN-CONTAINING PROTEIN 40","NAC domain-containing protein 040, NAC domain-containing protein 40, NAC domain-containing protein 54, NAC membrane-bound transcription factor 5, NAC MTF5, membrane-bound NAC-like TF 5, OsUBC26 Interact Protein 17",8," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:2000028 - regulation of photoperiodism, flowering, GO:0006355 - regulation of transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0048366 - leaf development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000655 - leaf development trait, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0001050 - leaf development stage , PO:0025034 - leaf ","Os08g0562200","LOC_Os08g44820.5, LOC_Os08g44820.1, LOC_Os08g44820.2, LOC_Os08g44820.3, LOC_Os08g44820.4"]
[{"$nulls":25},"Os01g0734800","Os01g0734800",-2.8323586,0,null,"Os11g0264300",1.918526,"Os01g0687800",1.5865997,{"$nulls":81},"SYP71","OsSYP71","_",null,5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005484 - SNAP receptor activity, GO:0016021 - integral to membrane, GO:0006906 - vesicle fusion, GO:0048278 - vesicle docking, GO:0006886 - intracellular protein transport, GO:0012505 - endomembrane system, GO:0000149 - SNARE binding, GO:0031201 - SNARE complex, GO:0050832 - defense response to fungus, GO:0006979 - response to oxidative stress","TO:0002657 - oxidative stress, TO:0000074 - blast disease",null,"Os05g0553700","LOC_Os05g48020.1"]
[{"$nulls":25},"Os07g0503500","Os07g0503500",3.1387196,0,null,"Os04g0631200",1.9133366,"Os02g0762100",1.587839,{"$nulls":81},"SGT1","OsSgt1, OsSGT1, Os SGT1","SUPPRESSOR OF THE G2 ALLELE OF SKP1","suppressor of the G2 allele of skp1",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005634 - nucleus","TO:0000112 - disease resistance, TO:0000074 - blast disease, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os01g0624500","LOC_Os01g43540.1"]
[{"$nulls":25},"Os02g0723200","Os02g0723200",1.5736467,0,null,"Os10g0391500",1.9066423,"Os01g0773000",1.6032486,{"$nulls":81},"LCYB","OsLCYbeta, OsLYCb, OsLCY, beta-OsLCY","LYCOPENE BETA-CYCLASE","lycopene e-cyclase, lycopene beta-cyclase",2," Biochemical character,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0009408 - response to heat, GO:0009416 - response to light stimulus, GO:0045436 - lycopene beta cyclase activity, GO:0016120 - carotene biosynthetic process, GO:0016117 - carotenoid biosynthetic process","TO:0000259 - heat tolerance, TO:0000075 - light sensitivity",null,"Os02g0190600","LOC_Os02g09750.1"]
[{"$nulls":25},"Os04g0398600","Os04g0398600",1.1510454,0,null,"Os11g0457700",1.9003301,"Os09g0487600",1.6109462,{"$nulls":81},"_","OsBI-1, OsBI1, BI1","_","Bax inhibitor-1",2," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0010446 - response to alkalinity, GO:0005783 - endoplasmic reticulum, GO:0005635 - nuclear envelope, GO:0000038 - very-long-chain fatty acid metabolic process, GO:0016021 - integral to membrane, GO:0043066 - negative regulation of apoptosis, GO:0006915 - apoptosis, GO:0006983 - ER overload response","TO:0000481 - alkali sensitivity",null,"Os02g0125300","LOC_Os02g03280.2, LOC_Os02g03280.3"]
[{"$nulls":25},"Os04g0670600","Os04g0670600",-2.0838645,0,null,"Os04g0412700",1.8935431,"Os04g0636300",1.6178966,{"$nulls":81},"BAG6","OsBAG6","BCL-2-ASSOCIATED ATHANOGENE 6","Bcl-2-associated athanogene 6",2," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os02g0719700","LOC_Os02g48780.1"]
[{"$nulls":25},"Os05g0500200","Os05g0500200",-2.3622143,0,null,"Os03g0221500",1.890921,"Os10g0330000",1.6180977,{"$nulls":81},"BAG3","OsBAG3","BCL-2-ASSOCIATED ATHANOGENE 3","Bcl-2-associated athanogene 3",6," Tolerance and resistance - Stress tolerance","GO:0005739 - mitochondrion",null,null,"Os06g0126500","LOC_Os06g03640.1"]
[{"$nulls":25},"Os03g0165400","Os03g0165400",4.8809204,0,null,"Os07g0632000",1.8827171,"Os01g0658700",1.6321597,{"$nulls":81},"FLS2","Os-FLS2, OsFLS2","FLAGELLIN SENSITIVE 2","flagellin sensitive2",4," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0002221 - pattern recognition receptor signaling pathway, GO:0005524 - ATP binding, GO:0032490 - detection of molecule of bacterial origin","TO:0000315 - bacterial disease resistance",null,"Os04g0618700","LOC_Os04g52780.1"]
[{"$nulls":25},"Os12g0429200","Os12g0429200",1.0025982,0,null,"Os02g0668100",1.8796076,"Os10g0554200",1.6377968,{"$nulls":81},"_","OsDSHCT","_","DOB1/SK12/helY-like DEAD-box Helicase",11," Tolerance and resistance - Stress tolerance","GO:0008026 - ATP-dependent helicase activity, GO:0005524 - ATP binding, GO:0010093 - specification of floral organ identity, GO:0003676 - nucleic acid binding",null,null,"Os11g0176200","LOC_Os11g07500.1, LOC_Os11g07500.2"]
[{"$nulls":25},"Os01g0978400","Os01g0978400",-1.709232,0,null,"Os04g0227500",1.8756933,"Os08g0562100",1.6496013,{"$nulls":81},"PRP5","OsPRP5, OsRH42, RH42","_","Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42",8," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0016607 - nuclear speck, GO:0008026 - ATP-dependent helicase activity, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0003723 - RNA binding, GO:0030620 - U2 snRNA binding","TO:0000181 - seed weight, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000346 - tiller number, TO:0000152 - panicle number, TO:0000040 - panicle length, TO:0002759 - grain number","PO:0020040 - leaf base , PO:0020139 - leaf midvein , PO:0020137 - leaf apex , PO:0020103 - flag leaf , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0009047 - stem , PO:0009005 - root ","Os08g0159900","LOC_Os08g06344.1, LOC_Os08g06344.2, LOC_Os08g06344.3"]
[{"$nulls":25},"Os05g0468500","Os05g0468500",-1.0017394,0,null,"Os02g0787200",1.8705875,"Os04g0485700",1.6575054,{"$nulls":81},"GH3-6","OsGH3-6, OsGH3.6, GH3.6","GH3-6",null,5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0009733 - response to auxin stimulus, GO:0016874 - ligase activity, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os05g0143800","LOC_Os05g05180.2, LOC_Os05g05180.1"]
[{"$nulls":25},"Os01g0330100","Os01g0330100",1.334633,0,null,"Os12g0615400",1.8686042,"Os03g0169800",1.6628205,{"$nulls":81},"GH3-11","OsGH3-11, OsGH3.11, GH3.11","GH3-11",null,7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009733 - response to auxin stimulus, GO:0009651 - response to salt stress, GO:0009416 - response to light stimulus, GO:0009941 - chloroplast envelope, GO:0016874 - ligase activity","TO:0006001 - salt tolerance",null,"Os07g0671500","LOC_Os07g47490.4, LOC_Os07g47490.3, LOC_Os07g47490.2, LOC_Os07g47490.1"]
[{"$nulls":25},"Os10g0393800","Os10g0393800",-1.8915354,0,null,"Os10g0564500",1.8656765,"Os10g0162400",1.6669707,{"$nulls":81},"_","OsBBX2, BBX2","_","B-box-containing protein 2",2," Tolerance and resistance - Stress tolerance","GO:0009753 - response to jasmonic acid stimulus, GO:0010039 - response to iron ion, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009751 - response to salicylic acid stimulus, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0010045 - response to nickel ion, GO:0046686 - response to cadmium ion, GO:0009739 - response to gibberellin stimulus","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000224 - iron sensitivity, TO:0000276 - drought tolerance, TO:0000166 - gibberellic acid sensitivity","PO:0009010 - seed , PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0007616 - flowering stage , PO:0025034 - leaf ","Os02g0176000","LOC_Os02g07930.1"]
[{"$nulls":25},"Os05g0429500","Os05g0429500",2.3385441,0,null,"Os03g0171900",1.8576733,"Os06g0160600",1.6719438,{"$nulls":81},"_","OsBBX14, BBX14, OsDBB3b, DBB3b","_","B-box-containing protein 14, DOUBLE B-BOX zinc finger gene 3b, DOUBLE B-BOX 3b, B-box protein 14",5," Reproductive organ - Heading date,  Coloration - Anthocyanin,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0048577 - negative regulation of short-day photoperiodism, flowering, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0010039 - response to iron ion, GO:0010045 - response to nickel ion, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0007623 - circadian rhythm","TO:0000224 - iron sensitivity, TO:0000486 - seed color, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000137 - days to heading, TO:0000071 - anthocyanin content","PO:0020103 - flag leaf , PO:0007632 - seed maturation stage , PO:0009010 - seed , PO:0009006 - shoot system , PO:0020141 - stem node , PO:0025034 - leaf ","Os05g0204600","LOC_Os05g11510.1"]
[{"$nulls":25},"Os05g0273800","Os05g0273800",1.7580222,0,null,"Os05g0244700",1.8530831,"Os01g0574800",1.6755605,{"$nulls":81},"BBX19","OsBBX19, OsM, DTH2, qDTH-2, OsCCT22, CCT22","B-BOX-CONTAINING PROTEIN 19","B-box-containing protein 19, Days to heading on chromosome 2, CCT domain-containing gene 22, CCT (CO, CO-LIKE and TOC1) domain protein 22, CCT domain protein 22",6," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010039 - response to iron ion, GO:0008270 - zinc ion binding, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0007623 - circadian rhythm, GO:0010045 - response to nickel ion, GO:0046686 - response to cadmium ion, GO:0048576 - positive regulation of short-day photoperiodism, flowering","TO:0006001 - salt tolerance, TO:0000224 - iron sensitivity, TO:0000303 - cold tolerance, TO:0000166 - gibberellic acid sensitivity, TO:0000276 - drought tolerance, TO:0000456 - spikelet number, TO:0000207 - plant height, TO:0002616 - flowering time, TO:0000172 - jasmonic acid sensitivity, TO:0000137 - days to heading","PO:0009010 - seed , PO:0009006 - shoot system , PO:0025034 - leaf ","Os06g0298200","LOC_Os06g19444.2, LOC_Os06g19444.1"]
[{"$nulls":25},"Os01g0946500","Os01g0946500",3.0061905,0,null,"Os03g0120200",1.8470777,"Os07g0665000",1.6801382,{"$nulls":81},"PL","OsMYB55, OsMYB-2, MYB55, MYB-2, OsPL","PURPLE LEAF","R2R3-MYB Transcription Factor 55, R2R3-MYB Transcription Factor OsMYB55, purple leaf",5," Vegetative organ - Leaf,  Coloration - Anthocyanin,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010150 - leaf senescence, GO:0009755 - hormone-mediated signaling, GO:0009408 - response to heat, GO:0003682 - chromatin binding, GO:0030912 - response to deep water, GO:0009718 - anthocyanin biosynthetic process, GO:0003677 - DNA binding, GO:0031540 - regulation of anthocyanin biosynthetic process, GO:0009658 - chloroplast organization, GO:0009738 - abscisic acid mediated signaling, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000447 - filled grain number, TO:0000592 - 1000-dehulled grain weight, TO:0000524 - submergence tolerance, TO:0002672 - auxin content, TO:0002667 - abscisic acid content, TO:0002668 - jasmonic acid content, TO:0000071 - anthocyanin content, TO:0000734 - grain length, TO:0000259 - heat tolerance, TO:0000249 - leaf senescence, TO:0000326 - leaf color, TO:0002724 - leaf sheath color","PO:0001054 - 4 leaf senescence stage ","Os05g0553400","LOC_Os05g48010.1"]
[{"$nulls":25},"Os09g0308900","Os09g0308900",1.1010138,0,null,"Os11g0287000",1.8434825,"Os12g0106000",1.6871611,{"$nulls":81},"MIR319A","OsmiR319a, Osa-miR319a, osa-MIR319aosa-miR319a osa-miR319a-3p osa-miR319a-3p.2-3p","MICRORNA319A","rice microRNA319a, MicroRNA319a",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Other","GO:0009965 - leaf morphogenesis, GO:0035068 - micro-ribonucleoprotein complex, GO:0009409 - response to cold, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA","TO:0000303 - cold tolerance, TO:0000370 - leaf width",null,"Os01g0659400","LOC_Os01g46984.1"]
[{"$nulls":25},"Os01g0847900","Os01g0847900",-1.1253902,0,null,"Os01g0183300",1.8383502,"Os03g0736600",1.6942667,{"$nulls":81},"GH9B3","OsGH9B3","GLYCOSIDE HYDROLASE 9B3","glycoside hydrolase OsGH9B3, glycoside hydrolase 9B3",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010215 - cellulose microfibril organization, GO:0005576 - extracellular region, GO:0042547 - cell wall modification during multidimensional cell growth, GO:0008810 - cellulase activity, GO:0009827 - plant-type cell wall modification, GO:0009507 - chloroplast, GO:0030245 - cellulose catabolic process","TO:0000068 - lodging incidence",null,"Os06g0256900","LOC_Os06g14540.1"]
[{"$nulls":25},"Os03g0115400","Os03g0115400",1.0783806,0,null,"Os08g0509200",1.8370824,"Os03g0439500",1.6984366,{"$nulls":81},"DST","OsDST, DLN102, OsDLN102","DROUGHT AND SALT TOLERANCE","zinc finger transcription factor DST, Drought and Salt Tolerance gene, DLN repressor 102, DLN motif protein 102",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0010119 - regulation of stomatal movement, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0009414 - response to water deprivation, GO:0006970 - response to osmotic stress, GO:0009651 - response to salt stress","TO:0002759 - grain number, TO:0006001 - salt tolerance, TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0000143 - relative biomass, TO:0000370 - leaf width, TO:0001016 - relative chlorophyll content, TO:0000095 - osmotic response sensitivity, TO:0000456 - spikelet number, TO:0000136 - relative water content, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content, TO:0000608 - sodium content, TO:0000609 - potassium content",null,"Os03g0786400","LOC_Os03g57240.1"]
[{"$nulls":25},"Os05g0586400","Os05g0586400",3.7398136,0,null,"Os01g0231800",1.8299803,"Os04g0583200",1.7046095,{"$nulls":81},"_","OsRFPH2-3","_","RING finger protein OsRFPH2-3, RING-H2 protein 3",1," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0010332 - response to gamma radiation","TO:0000168 - abiotic stress trait, TO:0000161 - radiation response trait",null,"Os01g0972000","LOC_Os01g74040.1"]
[{"$nulls":25},"Os10g0117800","Os10g0117800",-3.5295355,0,null,"Os05g0428400",1.8296326,"Os08g0154000",1.7047142,{"$nulls":81},"_","OsRFPH2-5, DLN133, OsDLN133","_","RING finger protein OsRFPH2-5, RING-H2 protein 5, DLN repressor 133, DLN motif protein 133",5," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0010332 - response to gamma radiation","TO:0000161 - radiation response trait, TO:0000168 - abiotic stress trait",null,"Os05g0179000","LOC_Os05g08610.4, LOC_Os05g08610.3, LOC_Os05g08610.2, LOC_Os05g08610.1"]
[{"$nulls":25},"Os03g0735100","Os03g0735100",-1.1424373,0,null,"Os02g0280200",1.819291,"Os04g0555000",1.7134777,{"$nulls":81},"_","OsRFPH2-16, OsGIRP1","_","RING finger protein OsRFPH2-16, RING-H2 protein 16, gamma rays-induced RING finger protein1, gamma rays-induced RING finger protein 1",11," Tolerance and resistance - Stress tolerance","GO:0010332 - response to gamma radiation, GO:0008270 - zinc ion binding","TO:0000161 - radiation response trait",null,"Os11g0629300","LOC_Os11g41140.1"]
[{"$nulls":25},"Os08g0407000","Os08g0407000",-0.9879381,0,null,"Os03g0799100",1.8175621,"Os03g0774400",1.7213577,{"$nulls":81},"_","OsRFPH2-22","_","RING finger protein OsRFPH2-22, RING-H2 protein 22",2," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding","TO:0000168 - abiotic stress trait",null,"Os02g0787500","LOC_Os02g54624.1"]
[{"$nulls":26},"Os01g0127700",0,-0.977979,null,"Os09g0484800",1.8154625,"Os04g0603900",1.7272363,{"$nulls":81},"_","OsRFPHC-8","_","RING finger protein OsRFPHC-8, RING-HC protein 8",5," Tolerance and resistance - Stress tolerance","GO:0010332 - response to gamma radiation","TO:0000161 - radiation response trait",null,"Os05g0397650","LOC_Os05g33000.1, LOC_Os05g33000.2"]
[{"$nulls":26},"Os03g0819900",0,-1.2907563,null,"Os11g0460500",1.8118577,"Os11g0309000",1.7292427,{"$nulls":81},"RFPV1","OsRFPV-1","_","RING finger protein OsRFPV-1, RING-V protein 1",1," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0010332 - response to gamma radiation, GO:0030912 - response to deep water","TO:0000524 - submergence tolerance, TO:0000161 - radiation response trait",null,"Os01g0303600","LOC_Os01g19800.1"]
[{"$nulls":26},"Os12g0431100",0,-2.2190163,null,"Os02g0146500",1.8104734,"Os02g0498600",1.7362866,{"$nulls":81},"NCED1","OsNCED1, OsCCD4a, CCD4a","9-CIS-EPOXYCAROTENOID DIOXYGENASE 1","9-cis-epoxycarotenoid dioxygenase 1, carotenoid-cleavage dioxygenase 4a, \\zeaxanthin 7, 8(7',8')-cleavage dioxygenase, chromoplastic\\\"\"",2," Biochemical character,  Coloration - Anthocyanin,  Coloration - Others,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009688 - abscisic acid biosynthetic process, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium, GO:0051213 - dioxygenase activity, GO:0009414 - response to water deprivation, GO:0009725 - response to hormone stimulus, GO:0009409 - response to cold, GO:0010287 - plastoglobule, GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, GO:0009813 - flavonoid biosynthetic process","TO:0000301 - xanthophyll content, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000289 - carotene content, TO:0000496 - carotenoid content, TO:0000401 - plant growth hormone sensitivity, TO:0002667 - abscisic acid content, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity","PO:0025034 - leaf ","Os02g0704000 ","LOC_Os02g47510.1"]
[{"$nulls":26},"Os01g0528300",0,-1.4003545,null,"Os10g0140200",1.8038172,"Os12g0106100",1.7413274,{"$nulls":81},"MIR167A","miR167a, osa-miR167aosa-miR167a-3p osa-miR167a-5p, OsmiR167a","MICRORNA167A","MICRORNA167a, osa-miRNA167a",12," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0035195 - gene silencing by miRNA, GO:0042742 - defense response to bacterium, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0009926 - auxin polar transport, GO:0009630 - gravitropism, GO:0006379 - mRNA cleavage","TO:0000207 - plant height, TO:0000175 - bacterial blight disease resistance, TO:0000429 - salt sensitivity, TO:0002693 - gravity response trait, TO:0000163 - auxin sensitivity, TO:0000567 - tiller angle"]
[{"$nulls":26},"Os10g0516500",0,-1.1469765,null,"Os12g0485600",1.7973903,"Os05g0557900",1.7481604,{"$nulls":81},"MIR169","miR169, osa-miR169, osa-MIR169a, miR169a, osa-miR169a","MICRORNA169","MICRORNA169, osa-miRNA169, MICRORNA169a, osa-miRNA169a",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000303 - cold tolerance"]
[{"$nulls":26},"Os05g0134000",0,-1.1218661,null,"Os01g0690800",1.7957493,"Os07g0511400",1.7552094,{"$nulls":81},"MIR167C","miR167c, osa-miR167cosa-miR167c-3p osa-miR167c-5p","MICRORNA167C","MICRORNA167c, osa-miRNA167c",3," Tolerance and resistance - Stress tolerance,  Other","GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA"]
[{"$nulls":26},"Os09g0489500",0,-2.236131,null,"Os05g0589500",1.7885394,"Os01g0371500",1.7612106,{"$nulls":81},"MIR168A","miR168a, osa-miR168a, osa-MIR168a osa-miR168a-3p osa-miR168a-5p, OsMIR168a","MICRORNA168A","MICRORNA168a, osa-miRNA168a",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0046686 - response to cadmium ion, GO:0048573 - photoperiodism, flowering, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling","TO:0000202 - germination ratio, TO:0000074 - blast disease, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000657 - spikelet anatomy and morphology trait, TO:0000391 - seed size, TO:0002616 - flowering time, TO:0000137 - days to heading, TO:0000152 - panicle number, TO:0006032 - panicle size, TO:0002768 - spikelet length, TO:0002759 - grain number, TO:0000447 - filled grain number, TO:0000146 - seed length, TO:0000149 - seed width, TO:0000592 - 1000-dehulled grain weight, TO:0000615 - abscisic acid sensitivity, TO:0000345 - seed viability"]
[{"$nulls":26},"Os04g0683700",0,-1.505579,null,"Os06g0256300",1.7876912,"Os12g0615400",1.7629586,{"$nulls":81},"_","OsSPX-MFS2, SPX-MFS2","_","SPX-MFS protein 2",2," Tolerance and resistance - Stress tolerance","GO:0005774 - vacuolar membrane, GO:0006817 - phosphate transport, GO:0000325 - plant-type vacuole, GO:0055085 - transmembrane transport, GO:0016021 - integral to membrane","TO:0002661 - seed maturation",null,"Os02g0678200","LOC_Os02g45520.1, LOC_Os02g45520.2"]
[{"$nulls":26},"Os03g0823700",0,-1.1662737,null,"Os10g0171500",1.7817173,"Os12g0209000",1.7735147,{"$nulls":81},"_","OsIMP-1, IMP-1, OsIMP, IMP","_","inositol monophosphatase 1, L-myo-inositol monophosphatase, IMPase",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006021 - inositol biosynthetic process, GO:0019853 - L-ascorbic acid biosynthetic process, GO:0010347 - L-galactose-1-phosphate phosphatase activity, GO:0009409 - response to cold, GO:0008934 - inositol-1(or 4)-monophosphatase activity, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0046854 - phosphoinositide phosphorylation","TO:0000303 - cold tolerance, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity",null,"Os03g0587000","LOC_Os03g39000.1, LOC_Os03g39000.2"]
[{"$nulls":26},"Os02g0182100",0,-1.0548993,null,"Os02g0557800",1.7785755,"Os11g0275200",1.7750632,{"$nulls":81},"HSP58.7","OsHsp58.7, OsHSP58.7, OsISC25, ISC25","58.7 KDA CLASS I HEAT SHOCK PROTEIN","58.7 kDa heat shock protein, 58.7-kD heat shock protein, Iron-sulfur cluster protein 25, heat shock protein 70",9," Tolerance and resistance - Stress tolerance","GO:0005739 - mitochondrion, GO:0005524 - ATP binding, GO:0008270 - zinc ion binding, GO:0046686 - response to cadmium ion, GO:0009651 - response to salt stress, GO:0006457 - protein folding, GO:0005886 - plasma membrane, GO:0005618 - cell wall",null,null,"Os09g0491772","LOC_Os09g31486.2, LOC_Os09g31486.1"]
[{"$nulls":26},"Os06g0275000",-1.3490849,-1.0695515,null,"Os01g0876200",1.7757988,"Os02g0801700",1.7780298,{"$nulls":81},"RAU1","OsLAX1, OsRAU1, OsAUX1, LAX1, AUX1","RELATED TO AUX1","like aux1-1, related to AUX1-1, auxin transporter 1",1," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0046685 - response to arsenic, GO:0009629 - response to gravity, GO:0048364 - root development, GO:0010031 - circumnutation, GO:0005886 - plasma membrane, GO:0006865 - amino acid transport, GO:0009734 - auxin mediated signaling pathway, GO:0015293 - symporter activity, GO:0048527 - lateral root development, GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0048449 - floral organ formation, GO:0009414 - response to water deprivation, GO:0010071 - root meristem specification, GO:0010311 - lateral root formation, GO:0010449 - root meristem growth, GO:0000302 - response to reactive oxygen species, GO:0042594 - response to starvation, GO:0010446 - response to alkalinity, GO:0009737 - response to abscisic acid stimulus, GO:0048829 - root cap development, GO:0016021 - integral to membrane, GO:0080022 - primary root development, GO:0048767 - root hair elongation, GO:0046686 - response to cadmium ion","TO:0002665 - root hair length, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000656 - root development trait, TO:0000346 - tiller number, TO:0002693 - gravity response trait, TO:0000163 - auxin sensitivity, TO:0000511 - phosphorus uptake, TO:0006022 - floral organ development trait, TO:0000615 - abscisic acid sensitivity, TO:0001012 - lateral root length, TO:0001013 - lateral root number, TO:0000227 - root length, TO:0000137 - days to heading, TO:0002672 - auxin content, TO:0006001 - salt tolerance, TO:0000145 - internode length","PO:0007520 - root development stage , PO:0001031 - 4 root elongation stage , PO:0025477 - floral organ primordium , PO:0004703 - carpel primordium , PO:0004705 - stamen primordium , PO:0007519 - 5 root hair formation stage , PO:0007600 - floral organ differentiation stage ","Os01g0856500","LOC_Os01g63770.2, LOC_Os01g63770.1"]
[{"$nulls":26},"Os02g0605900",0,-1.6030992,null,"Os07g0669700",1.7700906,"Os05g0230700",1.7808269,{"$nulls":81},"MDR4","OsABCB1, ABCB1, OsPGP1, OsMDR4","MULTIDRUG RESISTANCE 4","ABC transporter superfamily ABCB subgroup member 1, P-Glycoprotein 1, multidrug resistance 4",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006200 - ATP catabolic process, GO:0005886 - plasma membrane, GO:0008559 - xenobiotic-transporting ATPase activity, GO:0005524 - ATP binding, GO:0009630 - gravitropism, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0010315 - auxin efflux, GO:0010540 - basipetal auxin transport, GO:0048767 - root hair elongation, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000276 - drought tolerance, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os01g0290700","LOC_Os01g18670.1"]
[{"$nulls":26},"Os07g0568600",0,-1.2445259,null,"Os01g0730600",1.7648354,"Os11g0104400",1.7894953,{"$nulls":81},"ABCB12","OsABCB12, OsPGP12, PGP12","ABC TRANSPORTER B FAMILY MEMBER 12","ABC transporter superfamily ABCB subgroup member 12, P-Glycoprotein 12",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0006200 - ATP catabolic process, GO:0005524 - ATP binding, GO:0042626 - ATPase activity, coupled to transmembrane movement of substances, GO:0009414 - response to water deprivation, GO:0009507 - chloroplast, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0000163 - auxin sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0181675/Os03g0181750","LOC_Os03g08380.1"]
[{"$nulls":26},"Os02g0702100",0,-2.1104476,null,"Os01g0892500",1.7640735,"Os06g0626200",1.7900662,{"$nulls":81},"MDR13","OsABCB14, ABCB14, OsPGP14, OsMDR13, OsABCB14_1, OsABCB14_2","MULTIDRUG RESISTANCE 13","ABC transporter superfamily ABCB subgroup member 14, P-Glycoprotein 14, multidrug resistance 13",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010329 - auxin efflux transmembrane transporter activity, GO:0008361 - regulation of cell size, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009637 - response to blue light, GO:0005886 - plasma membrane, GO:0048443 - stamen development, GO:0009640 - photomorphogenesis, GO:0009414 - response to water deprivation, GO:0010540 - basipetal auxin transport, GO:0010541 - acropetal auxin transport, GO:0016021 - integral to membrane, GO:0042626 - ATPase activity, coupled to transmembrane movement of substances, GO:0009958 - positive gravitropism, GO:0043481 - anthocyanin accumulation in tissues in response to UV light, GO:0005524 - ATP binding","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0002672 - auxin content",null,"Os04g0459000","LOC_Os04g38570.2, LOC_Os04g38570.1"]
[{"$nulls":26},"Os02g0324700",0,-0.9914401,null,"Os02g0315600",1.761166,"Os03g0299600",1.8004555,{"$nulls":81},"MDR16","OsABCB21, ABCB21, OsPGP21, OsMDR16","MULTIDRUG RESISTANCE 16","ABC transporter superfamily ABCB subgroup member 21, P-Glycoprotein 21, multidrug resistance 16",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0042626 - ATPase activity, coupled to transmembrane movement of substances, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0006200 - ATP catabolic process, GO:0016021 - integral to membrane","TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os08g0153200","LOC_Os08g05710.1"]
[{"$nulls":26},"Os01g0778100",0,-1.671371,null,"Os05g0273800",1.7580222,"Os02g0754300",1.8062941,{"$nulls":81},"ABCE2","OsABCE2, RLI","ABC TRANSPORTER E FAMILY MEMBER 2","ABC transporter superfamily ABCE subgroup member 2, RNase L inhibitor",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006200 - ATP catabolic process, GO:0016887 - ATPase activity, GO:0051536 - iron-sulfur cluster binding, GO:0005524 - ATP binding, GO:0009055 - electron carrier activity","TO:0000163 - auxin sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance",null,"Os11g0546000","LOC_Os11g34350.1"]
[{"$nulls":26},"Os04g0616700",0,-1.218822,null,"Os01g0231000",1.753673,"Os01g0603100",1.8115629,{"$nulls":81},"ARG1 ","ABCI8, OsABCI8, OsABCI9, ABCI9, OsARG1","ALBINO-REVERTIBLE GREEN 1","ABC transporter superfamily ABCI subgroup member 8, albino-revertible green 1",5," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009658 - chloroplast organization, GO:0055068 - cobalt ion homeostasis, GO:0009941 - chloroplast envelope, GO:0009535 - chloroplast thylakoid membrane, GO:0006824 - cobalt ion transport, GO:0015675 - nickel ion transport, GO:0016021 - integral to membrane","TO:0000293 - chlorophyll-a content, TO:0000316 - photosynthetic ability, TO:0000295 - chlorophyll-b content, TO:0002715 - chloroplast development trait, TO:0000495 - chlorophyll content, TO:0000207 - plant height, TO:0000056 - stem color, TO:0000326 - leaf color",null,"Os05g0400600","LOC_Os05g33230.1"]
[{"$nulls":26},"Os02g0603600",0,-1.372179,null,"Os11g0528500",1.7460985,"Os09g0441900",1.8199071,{"$nulls":81},"PFPA3","OsPFPA3, OsPFP1a3, PFP1a3","PYROPHOSPHATE-FRUCTOSE-6-PHOSPHATEPHOSPHOTRANSFERASE ALPHA SUBUNIT 3","pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3, catalytic a-subunit 3 of PFP1",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0047334 - diphosphate-fructose-6-phosphate 1-phosphotransferase activity, GO:0005945 - 6-phosphofructokinase complex, GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0003872 - 6-phosphofructokinase activity, GO:0046872 - metal ion binding, GO:0005829 - cytosol, GO:0006096 - glycolysis, GO:0034058 - endosomal vesicle fusion","TO:0000482 - chemical stress sensitivity",null,"Os08g0345700","LOC_Os08g25720.1"]
[{"$nulls":26},"Os02g0433600",0,-1.2790259,null,"Os01g0502700",1.7452892,"Os05g0452500",1.8219867,{"$nulls":81},"HAC1;2","OsStr6, STR6, OsRhST, RLD, OsHAC1;2","HIGH AS CONTENT 1;2","Sulfurtransferase 6, rhodanese-related sulfurtransferase, rhodanese-like domain-containing protein, High As Content 1;2",4," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005737 - cytoplasm, GO:0046685 - response to arsenic, GO:0015700 - arsenite transport, GO:0030611 - arsenate reductase activity, GO:0005634 - nucleus","TO:0000276 - drought tolerance, TO:0000167 - cytokinin sensitivity, TO:0000465 - mineral and ion content related trait","PO:0005679 - epidermis , PO:0005708 - cortex , PO:0000252 - endodermis ","Os04g0249600","LOC_Os04g17660.3, LOC_Os04g17660.1, LOC_Os04g17660.2"]
[{"$nulls":26},"Os12g0170600",0,-0.9481948,null,"Os03g0837100",1.7395293,"Os01g0919700",1.8347851,{"$nulls":81},"ZFP179","OsZFP179, DLN27, OsDLN27","ZINC FINGER PROTEIN 179","zinc finger protein ZFP179, DLN repressor 27, DLN motif protein 27",1," Tolerance and resistance - Stress tolerance,  Other","GO:0008270 - zinc ion binding, GO:0009651 - response to salt stress, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0006001 - salt tolerance",null,"Os01g0839100","LOC_Os01g62190.1"]
[{"$nulls":26},"Os04g0509600",0,-1.0550585,null,"Os01g0719400",1.7359861,"Os06g0588450",1.8449711,{"$nulls":81},"MIOX","OsMIOX","MYO-INOSITOL OXYGENASE","Myo-inositol oxygenase",6," Tolerance and resistance - Stress tolerance","GO:0050113 - inositol oxygenase activity, GO:0019853 - L-ascorbic acid biosynthetic process, GO:0009414 - response to water deprivation, GO:0006949 - syncytium formation, GO:0019310 - inositol catabolic process, GO:0005506 - iron ion binding, GO:0005737 - cytoplasm, GO:0005783 - endoplasmic reticulum","TO:0000276 - drought tolerance",null,"Os06g0561000","LOC_Os06g36560.1, LOC_Os06g36560.2"]
[{"$nulls":26},"Os03g0327100",-1.3442878,-1.2523727,null,"Os02g0686700",1.7348709,"Os07g0164200",1.8467737,{"$nulls":81},"OAT","OsOAT, delta-OAT","ORNITHINE DELTA-AMINOTRANSFERASE","ornithine delta-aminotransferase, ornithine aminotransferase",3," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009651 - response to salt stress, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0006593 - ornithine catabolic process, GO:0009741 - response to brassinosteroid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0019544 - arginine catabolic process to glutamate, GO:0030170 - pyridoxal phosphate binding, GO:0042538 - hyperosmotic salinity response, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0006979 - response to oxidative stress, GO:0005759 - mitochondrial matrix, GO:0004587 - ornithine-oxo-acid transaminase activity, GO:0008270 - zinc ion binding, GO:0009856 - pollination, GO:0009901 - anther dehiscence, GO:0009908 - flower development, GO:0006561 - proline biosynthetic process, GO:0009414 - response to water deprivation, GO:0009413 - response to flooding","TO:0000095 - osmotic response sensitivity, TO:0000622 - flower development trait, TO:0006002 - proline content, TO:0002673 - amino acid content, TO:0020034 - glume width, TO:0000180 - spikelet fertility, TO:0000474 - glume opening, TO:0020033 - glume length, TO:0000484 - seed shape","PO:0007615 - flower development stage ","Os03g0643300","LOC_Os03g44150.1"]
[{"$nulls":26},"Os03g0194900",0,-1.1955652,null,"Os01g0747300",1.7339288,"Os03g0604401",1.8527521,{"$nulls":81},"_","OsDjA5","_","DnaJ domain protein A5",3," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0006457 - protein folding, GO:0046872 - metal ion binding",null,null,"Os03g0787300","LOC_Os03g57340.1"]
[{"$nulls":26},"Os07g0258400",0,-2.169833,null,"Os03g0445700",1.729031,"Os04g0380200",1.8558125,{"$nulls":81},"_","OsDjA11","_","DnaJ domain protein A11",12," Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009408 - response to heat, GO:0006457 - protein folding, GO:0046872 - metal ion binding",null,null,"Os12g0168400","LOC_Os12g07060.1"]
[{"$nulls":26},"Os02g0566800",0,-1.0808505,null,"Os03g0823400",1.7249632,"Os07g0568700",1.8588246,{"$nulls":81},"_","OsSce1, OsUBC1, UBC1, OsSCE1b, SCE1b, OsSCE1b.1, OsSCE1b.2","_","SUMO-conjugating enzyme 1, Ubiquitin-conjugating enzyme 1, E2 SUMO conjugation enzyme 1b, SUMO conjugation enzyme 1b, E2 protein SCE1b",10," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0016925 - protein sumoylation, GO:0019789 - SUMO ligase activity, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0019725 - cellular homeostasis","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0009010 - seed ","Os10g0536000","LOC_Os10g39120.2, LOC_Os10g39120.1"]
[{"$nulls":26},"Os12g0291400",0,7.0811596,null,"Os01g0133200",1.7188679,"Os02g0169900",1.8686079,{"$nulls":81},"ACA4","osACA4, OsACA8, OsACA4","CA2+-ATPASE 4","Ca2+ P-Type ATPase 4, vacuolar Ca2+-ATPase 4",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0043069 - negative regulation of programmed cell death, GO:0055081 - anion homeostasis, GO:0042742 - defense response to bacterium, GO:0046872 - metal ion binding, GO:0016021 - integral to membrane, GO:0009705 - plant-type vacuole membrane, GO:0005388 - calcium-transporting ATPase activity, GO:0009651 - response to salt stress, GO:0009624 - response to nematode, GO:0009507 - chloroplast, GO:0005886 - plasma membrane","TO:0006001 - salt tolerance",null,"Os11g0140400","LOC_Os11g04460.1"]
[{"$nulls":26},"Os12g0292400",0,6.6509457,null,"Os03g0602500",1.7163967,"Os12g0169100",1.8719492,{"$nulls":81},"ACA11","osACA11, OsACA6, OsACA5, OsPM4ATP8","CA2+-ATPASE 11","Ca2+ P-Type ATPase 11",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0005388 - calcium-transporting ATPase activity, GO:0005524 - ATP binding, GO:0005886 - plasma membrane, GO:0009555 - pollen development, GO:0048367 - shoot development, GO:0048281 - inflorescence morphogenesis, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0009624 - response to nematode, GO:0007338 - single fertilization, GO:0046872 - metal ion binding","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os04g0605500","LOC_Os04g51610.1, LOC_Os04g51610.3"]
[{"$nulls":26},"Os01g0210500",0,1.6222515,null,"Os03g0284400",1.7128242,"Os03g0861700",1.8775845,{"$nulls":81},"PI12","Pi12(t), Pi12(t)*, Pi12, Pi-12(t)","PYRICULARIA ORYZAE RESISTANCE 12","Pyricularia oryzae resistance from Hong-jiao zhan (an indica cultivar), Magnaporthe grisea resistance-12, Blast resistance 12",12," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000485 - sterility related trait, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf "]
[{"$nulls":26},"Os01g0930800",0,1.3126802,null,"Os04g0175300",1.708851,"Os04g0403500",1.8801974,{"$nulls":81},"WSI76","wsi76, OsLEA24/OsGolS2, OsGolS2/OsLEA24, OsLEA24, OsGolS2, GolS2, LEA24, OsGolS1, GolS1","WATER STRESS INDUCIBLE PROTEIN 76","water stress-induced 76, GALACTINOL SYNTHASE 2, galactinol synthase 1",7," Tolerance and resistance - Stress tolerance","GO:0048511 - rhythmic process, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0042542 - response to hydrogen peroxide, GO:0009644 - response to high light intensity, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0009737 - response to abscisic acid stimulus","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity","PO:0025034 - leaf , PO:0009005 - root , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009006 - shoot system ","Os07g0687900 ","LOC_Os07g48830.2, LOC_Os07g48830.1"]
[{"$nulls":26},"Os03g0239300",0,1.4908657,null,"Os09g0255200",1.7051654,"Os08g0333100",1.8845898,{"$nulls":81},"PR1-52","OsPR1#052, OsPR1-52","PATHOGENESIS-RELATED GENE 1-52","pathogenesis-related protein 1-52, PR protein 1-52",5," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005576 - extracellular region",null,null,"Os05g0595200","LOC_Os05g51680.1, LOC_Os05g51680.2"]
[{"$nulls":26},"Os08g0105800",0,1.3801135,null,"Os02g0775400",1.701961,"Os07g0657900",1.8899571,{"$nulls":81},"SET1","OsSET1, SDG721, OsSDG721","SET PROTEIN 1","SET protein 1, SET DOMAIN GROUP 721 protein",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005634 - nucleus, GO:0010446 - response to alkalinity, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0051568 - histone H3-K4 methylation, GO:0008168 - methyltransferase activity, GO:0008270 - zinc ion binding, GO:0009294 - DNA mediated transformation","TO:0000206 - leaf angle, TO:0000590 - grain weight, TO:0006001 - salt tolerance, TO:0020004 - shoot sodium content, TO:0000525 - sodium to potassium content ratio, TO:0020003 - shoot potassium content, TO:0000396 - grain yield, TO:0000357 - growth and development trait, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000481 - alkali sensitivity, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000397 - grain size","PO:0009047 - stem , PO:0009005 - root , PO:0009039 - glume , PO:0009049 - inflorescence , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0218800","LOC_Os01g11952.1"]
[{"$nulls":26},"Os10g0577500",0,1.7995996,null,"Os01g0832900",1.6958817,"Os01g0158566",1.8948256,{"$nulls":81},"MTP7","OsMTP7","METAL TOLERANCE PROTEIN 7","metal tolerance protein 7",4," Tolerance and resistance - Stress tolerance","GO:0010043 - response to zinc ion, GO:0016021 - integral to membrane, GO:0008324 - cation transmembrane transporter activity, GO:0048316 - seed development, GO:0046686 - response to cadmium ion","TO:0000351 - zinc sensitivity","PO:0001170 - seed development stage ","Os04g0298200","LOC_Os04g23180.1"]
[{"$nulls":26},"Os05g0480400",0,2.7635052,null,"Os08g0414700",1.69453,"Os03g0171900",1.9032122,{"$nulls":81},"MTP12","OsMTP12","METAL TOLERANCE PROTEIN 12","metal tolerance protein 12",8," Tolerance and resistance - Stress tolerance","GO:0005774 - vacuolar membrane, GO:0016021 - integral to membrane, GO:0008324 - cation transmembrane transporter activity, GO:0010039 - response to iron ion, GO:0010043 - response to zinc ion, GO:0032025 - response to cobalt ion, GO:0046686 - response to cadmium ion, GO:0048316 - seed development","TO:0000224 - iron sensitivity, TO:0000016 - cobalt sensitivity, TO:0000351 - zinc sensitivity","PO:0001170 - seed development stage ","Os08g0422200","LOC_Os08g32650.1"]
[{"$nulls":26},"Os10g0516100",0,4.7640057,null,"Os03g0805400",1.6876839,"Os07g0565600",1.9124368,{"$nulls":81},"AP37 ","OsAP37","ASPARTIC PROTEASE 37","aspartic protease 37, E. coli cation transport protein ChaC homolog",4," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0006508 - proteolysis, GO:0048653 - anther development, GO:0012501 - programmed cell death, GO:0004190 - aspartic-type endopeptidase activity","TO:0000432 - temperature response trait, TO:0000437 - male sterility","PO:0001004 - anther development stage ","Os04g0448500","LOC_Os04g37570.1"]
[{"$nulls":26},"Os01g0636500",0,1.3535758,null,"Os04g0692600",1.6868957,"Os08g0332700",1.9147564,{"$nulls":81},"_","OsHOS1, HOS1","_","high expression of osmotically responsive gene 1, HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1, HIGH OSMOTICALLY RESPONSIVE GENE 1",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009612 - response to mechanical stimulus, GO:0009409 - response to cold, GO:0001966 - thigmotaxis, GO:0050793 - regulation of developmental process, GO:0040008 - regulation of growth, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0016874 - ligase activity","TO:0000303 - cold tolerance, TO:0002710 - root shape",null,"Os03g0737200","LOC_Os03g52700.1"]
[{"$nulls":26},"Os09g0503100",0,2.622944,null,"Os01g0667700",1.6854154,"Os05g0480000",1.9188571,{"$nulls":81},"FWL2","OsFWL2, OsPCR1, PCR1","FRUIT-WEIGHT2.2-LIKE 2","FW2.2-like 2, plant cadmium resistance protein 1",2," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane","TO:0000605 - hydrogen peroxide content",null,"Os02g0579800","LOC_Os02g36940.1"]
[{"$nulls":26},"Os06g0289900",0,7.8760147,null,"Os06g0705700",1.6767224,"Os06g0287700",1.927749,{"$nulls":81},"FWL7","OsFWL7","FRUIT-WEIGHT2.2-LIKE 7","FW2.2-like 7",3," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0010233 - phloem transport, GO:0046686 - response to cadmium ion, GO:0048366 - leaf development, GO:0015691 - cadmium ion transport","TO:0000227 - root length, TO:0000552 - shoot dry weight, TO:0000080 - micronutrient sensitivity, TO:0000636 - relative shoot dry weight, TO:0000655 - leaf development trait, TO:0000465 - mineral and ion content related trait","PO:0009005 - root ","Os03g0830500","LOC_Os03g61500.1"]
[{"$nulls":26},"Os01g0368000",0,2.6936905,null,"Os02g0661100",1.6721458,"Os01g0598600",1.9372562,{"$nulls":81},"_","OsMPS","_","MULTIPASS",2," Tolerance and resistance - Stress tolerance","GO:0003682 - chromatin binding, GO:0003677 - DNA binding",null,null,"Os02g0618400","LOC_Os02g40530.1"]
[{"$nulls":26},"Os01g0805300",0,3.79061,null,"Os05g0153500",1.6694251,"Os05g0361900",1.9424101,{"$nulls":81},"_","OsLTP1.6, OsLtpI.6","_","non-specific lipid transfer protein 1.6, lipid transfer protein 1.6, type 1 non-specific lipid transfer protein 6",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006869 - lipid transport, GO:0008289 - lipid binding, GO:0009611 - response to wounding, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os06g0539500","LOC_Os06g34840.1"]
[{"$nulls":26},"Os05g0192100",0,2.9939125,null,"Os11g0484500",1.6661419,"Os02g0296800",1.9466571,{"$nulls":81},"_","OsLTP1.14, OsLtpI.14","_","non-specific lipid transfer protein 1.14, lipid transfer protein 1.14, type 1 non-specific lipid transfer protein 14, Non-specific lipid-transfer protein 1",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0008233 - peptidase activity, GO:0006508 - proteolysis, GO:0006869 - lipid transport, GO:0008289 - lipid binding, GO:0046688 - response to copper ion","TO:0000021 - copper sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os11g0427800","LOC_Os11g24070.1"]
[{"$nulls":26},"Os05g0589400",0,5.3580303,null,"Os11g0210000",1.6600405,"Os05g0535900",1.9528507,{"$nulls":81},"_","OsLTP2.4, OsLtpII.4","_","non-specific lipid transfer protein 2.4, lipid transfer protein 2.4, type 2 non-specific lipid transfer protein 4",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion","TO:0000021 - copper sensitivity",null,"Os05g0550300","LOC_Os05g47700.1"]
[{"$nulls":26},"Os07g0634900",0,3.0182467,null,"Os06g0251200",1.6536685,"Os03g0857600",1.9666133,{"$nulls":81},"_","OsCHS, FAE, OsFAE1","_","Chalcone Synthase, FATTY ACID ELONGATION1, fatty acid elongase 1",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0006633 - fatty acid biosynthetic process, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0016020 - membrane","TO:0006001 - salt tolerance",null,"Os05g0574600","LOC_Os05g49900.1"]
[{"$nulls":26},"Os02g0562700",0,1.3901037,null,"Os06g0242600",1.6493307,"osa-miR168b",1.9713985,{"$nulls":81},"GRX28","OsGRX28","GLUTAREDOXIN 28","glutaredoxin 28, glutaredoxin-C14",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0046688 - response to copper ion, GO:0045454 - cell redox homeostasis, GO:0022900 - electron transport chain, GO:0015035 - protein disulfide oxidoreductase activity, GO:0009055 - electron carrier activity, GO:0005737 - cytoplasm","TO:0000021 - copper sensitivity",null,"Os12g0538600","LOC_Os12g35330.1"]
[{"$nulls":26},"Os03g0238600",0,1.3971219,null,"Os06g0561000",1.6449728,"Os04g0507700",1.9769448,{"$nulls":81},"VHA-B","OsVHA-B, VHA-B1, OsVHA-B1","VACUOLAR H-ATPASE B SUBUNIT","Vacuolar H-ATPase B subunit, vacuolar-ATPase subunit B, vacuolar H+-ATPase B subunit, V-ATPase B, Vacuolar ATPase B subunit",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0005886 - plasma membrane, GO:0009941 - chloroplast envelope, GO:0010255 - glucose mediated signaling, GO:0015991 - ATP hydrolysis coupled proton transport, GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, GO:0033180 - proton-transporting V-type ATPase, V1 domain, GO:0046034 - ATP metabolic process, GO:0005773 - vacuole, GO:0005524 - ATP binding",null,null,"Os06g0568200","LOC_Os06g37180.1"]
[{"$nulls":26},"Os07g0413800",0,4.0813904,null,"Os04g0650900",1.6362556,"Os10g0550775",1.9796014,{"$nulls":81},"VQ4","OsVQ4","VQ-MOTIF PROTEIN 4","VQ motif-containing protein 4, valine-glutamine protein 4",1," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0051091 - positive regulation of transcription factor activity","TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0808900","LOC_Os01g59410.1"]
[{"$nulls":26},"Os01g0603300",0,1.9925747,null,"Os03g0650000",1.633223,"Os07g0475700",1.9867239,{"$nulls":81},"VQ9","OsVQ9","VQ MOTIF-CONTAINING PROTEIN 9","VQ motif-containing protein 9, valine-glutamine protein 9",2," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os02g0753700","LOC_Os02g51740.1"]
[{"$nulls":26},"Os03g0333400",0,4.14127,null,"Os04g0423400",1.6304783,"Os02g0609700",1.9914335,{"$nulls":81},"VQ14","OsVQ14","VQ MOTIF-CONTAINING PROTEIN 14","VQ motif-containing protein 14, valine-glutamine protein 14",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance",null,"Os03g0789100","LOC_Os03g57520.1"]
[{"$nulls":26},"Os08g0242700",0,3.1629536,null,"Os02g0743700",1.6250935,"Os05g0449200",1.9940672,{"$nulls":81},"VQ24","OsVQ24","VQ MOTIF-CONTAINING PROTEIN 24","VQ motif-containing protein 24, valine-glutamine protein 24",6," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os06g0618700","LOC_Os06g41450.1"]
[{"$nulls":26},"Os09g0438100",0,2.6970565,null,"Os07g0663300",1.6240076,"Os02g0174100",1.9949021,{"$nulls":81},"VQ26","OsVQ26","VQ MOTIF-CONTAINING PROTEIN 26","VQ motif-containing protein 26, valine-glutamine protein 26",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os07g0161700","LOC_Os07g06750.1"]
[{"$nulls":26},"Os08g0106000",0,5.1527634,null,"Os06g0297600",1.620533,"Os02g0595200",1.9979945,{"$nulls":81},"VQ31","OsVQ31","VQ MOTIF-CONTAINING PROTEIN 31","VQ motif-containing protein 31, valine-glutamine protein 31",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os07g0687400","LOC_Os07g48800.1"]
[{"$nulls":26},"Os09g0546900",0,1.039621,null,"Os02g0105500",1.6149969,"Os09g0520550",2.0062113,{"$nulls":81},"VQ37","OsVQ37","VQ MOTIF-CONTAINING PROTEIN 37","VQ motif-containing protein 37, valine-glutamine protein 37",11," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os11g0131100","LOC_Os11g03660.1"]
[{"$nulls":26},"Os01g0544200",0,1.9907635,null,"Os01g0803200",1.6096429,"Os03g0684700",2.0154927,{"$nulls":81},"SBP","Os SBP, OsSBP","SELENIUM-BINDING PROTEIN","selenium-binding protein, selenium-binding protein homologue",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0071291 - cellular response to selenium ion, GO:0046686 - response to cadmium ion, GO:0042542 - response to hydrogen peroxide, GO:0000103 - sulfate assimilation, GO:0010197 - polar nucleus fusion, GO:0008430 - selenium binding","TO:0000432 - temperature response trait",null,"Os01g0916400","LOC_Os01g68770.1"]
[{"$nulls":26},"Os02g0623300",5.432092,3.0280483,null,"Os10g0348900",1.6023359,"Os05g0129200",2.024666,{"$nulls":81},"_","GOS2, OseIF1, OsGOS2, SUI1, PtfS","_","translation initiation factor eIF1, protein translation factor SUI1",7," Tolerance and resistance - Stress tolerance,  Other","GO:0003743 - translation initiation factor activity, GO:0006417 - regulation of translation","TO:0006001 - salt tolerance, TO:0000432 - temperature response trait, TO:0000615 - abscisic acid sensitivity",null,"Os07g0529800","LOC_Os07g34589.2, LOC_Os07g34589.3, LOC_Os07g34589.4, LOC_Os07g34589.6"]
[{"$nulls":26},"Os07g0489800",0,2.4911735,null,"Os12g0459300",1.6020631,"Os12g0488300",2.0259392,{"$nulls":81},"_","GSC 381, OsLEA6","_","group 6 Late Embryogenesis Abundant (LEA) protein, late embryogenesis abundant protein 6",9," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0006952 - defense response, GO:0048366 - leaf development, GO:0071277 - cellular response to calcium ion, GO:0048046 - apoplast, GO:0009651 - response to salt stress, GO:0006457 - protein folding, GO:0005886 - plasma membrane, GO:0005829 - cytosol, GO:0005730 - nucleolus, GO:0005618 - cell wall, GO:0050821 - protein stabilization, GO:0005739 - mitochondrion, GO:0010286 - heat acclimation, GO:0005524 - ATP binding, GO:0009908 - flower development","TO:0000615 - abscisic acid sensitivity, TO:0000188 - drought sensitivity",null,"Os09g0482300"]
[{"$nulls":26},"Os02g0697400",0,4.7170224,null,"Os10g0489000",1.5963122,"Os12g0538800",2.0305996,{"$nulls":81},"OLE18","ole18, OsOLE18","18 KDA OLEOSIN","18 kDa oleosin, Oleosin KD18",3," Seed - Morphological traits - Embryo,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0010344 - seed oilbody biogenesis, GO:0016021 - integral to membrane, GO:0012511 - monolayer-surrounded lipid storage body, GO:0009628 - response to abiotic stimulus, GO:0019915 - lipid storage, GO:0050826 - response to freezing","TO:0000168 - abiotic stress trait",null,"Os03g0699000","LOC_Os03g49190.1"]
[{"$nulls":26},"Os03g0198500",0,1.7501227,null,"Os04g0677500",1.593483,"Os01g0367400",2.0314393,{"$nulls":81},"DXS1","CLA1, OsDXS1, dxs1, OsDXS, DXS, OsTKL1, TKL1","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 1","CLA1 transketolase-like protein, 1-Deoxy-D-xylulose 5-phosphate synthase 1, transketolase 1",5," Biochemical character,  Coloration - Others,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity, GO:0005829 - cytosol, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009416 - response to light stimulus, GO:0008299 - isoprenoid biosynthetic process, GO:0046872 - metal ion binding, GO:0016114 - terpenoid biosynthetic process, GO:0015995 - chlorophyll biosynthetic process, GO:0009570 - chloroplast stroma, GO:0009228 - thiamin biosynthetic process","TO:0000289 - carotene content, TO:0000075 - light sensitivity",null,"Os05g0408900","LOC_Os05g33840.1"]
[{"$nulls":26},"Os04g0477500",0,1.3472666,null,"Os04g0438400",1.5860044,"Os02g0639800",2.0388052,{"$nulls":81},"_","r10","_","R-like gene 10, resistance gene 10",11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response"]
[{"$nulls":26},"Os05g0454200",0,3.3420017,null,"Os04g0658800",1.5813228,"Os10g0214132",2.0490835,{"$nulls":81},"_","r16","_","R-like gene 16, resistance gene 16",9," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0043531 - ADP binding"]
[{"$nulls":26},"Os06g0537700",0,1.0249586,null,"Os01g0858350",1.5791484,"Os01g0944000",2.0534947,{"$nulls":81},"SMT1-1","Ossmt1-1, OsSMT1-1","STEROL METHYLTRANSFERASE 1-1 ","sterol methyltransferase 1-1, sterol-C24-methyltransferase 1-1",7," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009793 - embryonic development ending in seed dormancy, GO:0009805 - coumarin biosynthetic process, GO:0006597 - spermine biosynthetic process, GO:0016126 - sterol biosynthetic process, GO:0016132 - brassinosteroid biosynthetic process, GO:0019745 - pentacyclic triterpenoid biosynthetic process, GO:0005773 - vacuole, GO:0003838 - sterol 24-C-methyltransferase activity, GO:0042398 - cellular amino acid derivative biosynthetic process, GO:0006084 - acetyl-CoA metabolic process, GO:0008295 - spermidine biosynthetic process, GO:0005783 - endoplasmic reticulum, GO:0006598 - polyamine catabolic process, GO:0009506 - plasmodesma, GO:0009611 - response to wounding","TO:0000370 - leaf width, TO:0000135 - leaf length, TO:0000145 - internode length, TO:0000206 - leaf angle, TO:0000136 - relative water content, TO:0000207 - plant height, TO:0000276 - drought tolerance, TO:0000040 - panicle length",null,"Os07g0206700","LOC_Os07g10600.1, LOC_Os07g10600.2"]
[{"$nulls":26},"Os01g0668100",0,3.9767025,null,"Os11g0488600",1.575945,"Os11g0610900",2.055989,{"$nulls":81},"SAMDC2","SamDC2, AdoMetDC2, OsSAMDC2","S-ADENOSYLMETHIONINE DECARBOXYLASE 2","S-adenosylmethionine decarboxylase 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008295 - spermidine biosynthetic process, GO:0009408 - response to heat, GO:0004014 - adenosylmethionine decarboxylase activity, GO:0009651 - response to salt stress, GO:0006597 - spermine biosynthetic process, GO:0006596 - polyamine biosynthetic process, GO:0006557 - S-adenosylmethioninamine biosynthetic process","TO:0006001 - salt tolerance, TO:0000259 - heat tolerance",null,"Os02g0611200 ","LOC_Os02g39795.1, LOC_Os02g39790.2, LOC_Os02g39790.1"]
[{"$nulls":26},"Os06g0131700",5.644571,4.2799582,null,"Os02g0223700",1.5723677,"Os08g0505200",2.0629206,{"$nulls":81},"GNS6","Gns6, OsGns6","BETA-1,3-GLUCANASE 6","beta-1, 3-glucanase 6",1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005975 - carbohydrate metabolic process, GO:0009409 - response to cold, GO:0009817 - defense response to fungus, incompatible interaction, GO:0009651 - response to salt stress, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0005618 - cell wall, GO:0009617 - response to bacterium, GO:0048046 - apoplast, GO:0005773 - vacuole, GO:0005886 - plasma membrane",null,null,"Os01g0940800","LOC_Os01g71350.1"]
[{"$nulls":26},"Os01g0924000",1.1675959,1.978398,null,"Os03g0413100",1.567461,"Os12g0106600",2.0669186,{"$nulls":81},"_","PINO1, INO1","_","Porteresia coarctata INO1 gene",null," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004512 - inositol-3-phosphate synthase activity, GO:0006021 - inositol biosynthetic process, GO:0008654 - phospholipid biosynthetic process"]
[{"$nulls":26},"Os01g0305900",0,1.7271547,null,"Os05g0415200",1.5649118,"Os04g0685900",2.0713534,{"$nulls":81},"_","Trx x","_","Thioredoxin x",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009750 - response to fructose stimulus, GO:0008047 - enzyme activator activity, GO:0015035 - protein disulfide oxidoreductase activity, GO:0016671 - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor, GO:0045454 - cell redox homeostasis, GO:0006662 - glycerol ether metabolic process, GO:0006833 - water transport, GO:0009055 - electron carrier activity, GO:0009570 - chloroplast stroma, GO:0009651 - response to salt stress","TO:0002657 - oxidative stress",null,"Os04g0676100","LOC_Os04g57930.1"]
[{"$nulls":26},"Os02g0101400",0,1.2243428,null,"Os08g0484500",1.5628654,"Os07g0548300",2.0732763,{"$nulls":81},"_","OsAPRL2, APRL2","_","adenosine 5'-phosphosulfate reductase-like protein 2, Adenosine 5'-phosphosulfate reductase-like 2",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005783 - endoplasmic reticulum, GO:0016853 - isomerase activity, GO:0016021 - integral to membrane, GO:0003756 - protein disulfide isomerase activity, GO:0006457 - protein folding, GO:0034976 - response to endoplasmic reticulum stress, GO:0046688 - response to copper ion, GO:0045454 - cell redox homeostasis","TO:0000021 - copper sensitivity",null,"Os06g0220800","LOC_Os06g11740.1"]
[{"$nulls":26},"Os01g0687800",0,1.5865997,null,"Os06g0113600",1.5576077,"Os10g0437600",2.085221,{"$nulls":81},"_","OsCIA","_","cold-induced anther protein",10," Tolerance and resistance - Stress tolerance",null,"TO:0000432 - temperature response trait",null,"Os10g0159700","LOC_Os10g07210.1"]
[{"$nulls":26},"Os02g0110200",0,3.3673182,null,"Os03g0336200",1.5530306,"Os10g0501900",2.0936644,{"$nulls":81},"_","RMtATPd2, OsMtATPd2, MtATPd2","_","mitochondrial ATP synthase d2",8," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005507 - copper ion binding, GO:0015078 - hydrogen ion transmembrane transporter activity, GO:0022626 - cytosolic ribosome, GO:0005774 - vacuolar membrane, GO:0009651 - response to salt stress, GO:0009853 - photorespiration, GO:0015986 - ATP synthesis coupled proton transport, GO:0008270 - zinc ion binding, GO:0051788 - response to misfolded protein, GO:0080129 - proteasome core complex assembly, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), GO:0009535 - chloroplast thylakoid membrane, GO:0005730 - nucleolus, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os08g0478200","LOC_Os08g37320.1"]
[{"$nulls":26},"Os06g0704700",0,2.3237917,null,"Os05g0126800",1.5493937,"Os09g0532900",2.1058097,{"$nulls":81},"_","OsSAHH, SAHH","_","AdoHcy hydrolase, Adenosylhomocysteinase, S-adenosyl-L-cystein hydrolase, S-adenosyl homocysteine hydrolase",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016441 - posttranscriptional gene silencing, GO:0004013 - adenosylhomocysteinase activity, GO:0005773 - vacuole, GO:0005507 - copper ion binding, GO:0006346 - methylation-dependent chromatin silencing, GO:0006730 - one-carbon metabolic process, GO:0005886 - plasma membrane","TO:0000432 - temperature response trait",null,"Os11g0455500","LOC_Os11g26850.2, LOC_Os11g26850.3"]
[{"$nulls":26},"Os06g0641500",0,3.102296,null,"Os06g0576800",1.545256,"Os01g0258100",2.1115348,{"$nulls":81},"BZIP39","OsbZIP39, bZIP39, DLN138, OsDLN138","b-ZIP TRANSCRIPTION FACTOR 39","b-ZIP transcription factor 39, basic leucine zipper transcription factor 39, DLN repressor 138, DLN motif protein 138",5," Tolerance and resistance - Stress tolerance,  Other","GO:0006986 - response to unfolded protein",null,null,"Os05g0411300","LOC_Os05g34050.1"]
[{"$nulls":26},"Os10g0477600",3.2570317,1.9038072,null,"Os01g0930000",1.5345935,"Os07g0558500",2.1247575,{"$nulls":81},"_","OsSAR1, SAR1, OsARL1c, ARL1c, OsSar1d, Sar1d","_","SAR1B-like gene, secretion-associated Ras-superfamily protein 1, ARF-like protein 1c, \\secretion-associated, Ras-related protein1d\\\"\"",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005794 - Golgi apparatus, GO:0009269 - response to desiccation, GO:0009737 - response to abscisic acid stimulus, GO:0005525 - GTP binding, GO:0006886 - intracellular protein transport, GO:0009507 - chloroplast, GO:0005886 - plasma membrane, GO:0005829 - cytosol, GO:0005783 - endoplasmic reticulum, GO:0016192 - vesicle-mediated transport","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance",null,"Os06g0225000","LOC_Os06g12090.1"]
[{"$nulls":26},"Os04g0474800",0,1.4347492,null,"Os03g0331600",1.532835,"Os03g0642450",2.1301122,{"$nulls":81},"BZIP3","OsbZIP03, OsbZIP3, OsHBP1b, HBP1b, OsTGA5, TGA5, OsTGA5/OsbZIP3","b-ZIP TRANSCRIPTION FACTOR 3","b-ZIP transcription factor 03, histone-gene binding protein 1b, Histone gene binding protein-1b, TGA transcription factor 5",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006952 - defense response, GO:0043565 - sequence-specific DNA binding, GO:0009737 - response to abscisic acid stimulus, GO:0009408 - response to heat, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0042742 - defense response to bacterium, GO:0016209 - antioxidant activity, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0003700 - transcription factor activity","TO:0000175 - bacterial blight disease resistance, TO:0000112 - disease resistance, TO:0000495 - chlorophyll content, TO:0000276 - drought tolerance, TO:0000605 - hydrogen peroxide content, TO:0000316 - photosynthetic ability, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance",null,"Os01g0279900","LOC_Os01g17260.2, LOC_Os01g17260.1"]
[{"$nulls":26},"Os01g0227100",0,1.207028,null,"Os02g0664400",1.5294901,"Os02g0583000",2.1355107,{"$nulls":81},"BZIP18","OsbZIP18","b-ZIP TRANSCRIPTION FACTOR 18","b-ZIP transcription factor 18",2," Tolerance and resistance - Stress tolerance,  Other","GO:0042594 - response to starvation, GO:0009082 - branched chain family amino acid biosynthetic process, GO:0009099 - valine biosynthetic process, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0043565 - sequence-specific DNA binding, GO:0030246 - carbohydrate binding, GO:0006995 - cellular response to nitrogen starvation, GO:0009098 - leucine biosynthetic process","TO:0002673 - amino acid content","PO:0025034 - leaf ","Os02g0203000","LOC_Os02g10860.1"]
[{"$nulls":26},"Os02g0744200",0,2.7205048,null,"Os12g0533600",1.5275658,"Os10g0567400",2.1365983,{"$nulls":81},"BZIP24","OsbZIP24, OsFD3, FD3, bZIP24/OsFD3","b-ZIP TRANSCRIPTION FACTOR 24","bZIP transcription factor 24, FD Transcription Factor 3",2," Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0005634 - nucleus, GO:0043565 - sequence-specific DNA binding, GO:0009408 - response to heat","TO:0000432 - temperature response trait","PO:0025034 - leaf , PO:0020148 - shoot apical meristem ","Os02g0833600","LOC_Os02g58670.1, LOC_Os02g58670.2"]
[{"$nulls":26},"Os07g0669100",0,1.0711817,null,"Os02g0770600",1.5194044,"Os12g0529900",2.1477907,{"$nulls":81},"BZIP72","OsbZIP72, OsAREB2, OsABF4, Osbzip72, OsABI5, ABI5","b-ZIP TRANSCRIPTION FACTOR 72","b-ZIP transcription factor 72, AREB/ABF-family protein 2",9," Vegetative organ - Leaf,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Germination,  Other","GO:0043565 - sequence-specific DNA binding, GO:0009738 - abscisic acid mediated signaling, GO:0010150 - leaf senescence, GO:0010029 - regulation of seed germination, GO:0009787 - regulation of abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0003700 - transcription factor activity","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000249 - leaf senescence","PO:0007057 - 0 seed germination stage , PO:0001054 - 4 leaf senescence stage ","Os09g0456200","LOC_Os09g28310.1"]
[{"$nulls":26},"Os04g0107300",0,1.3097124,null,"Os10g0577700",1.5165423,"Os02g0732300",2.154048,{"$nulls":81},"LEA2","OsLEA2, OsLEA4","LATE EMBRYOGENESIS ABUNDANT PROTEIN 2","late embryogenesis abundant protein 2, late embryogenesis abundant protein 4",6," Tolerance and resistance - Stress tolerance","GO:0009790 - embryonic development",null,null,"Os06g0110200","LOC_Os06g02040.1"]
[{"$nulls":26},"Os07g0577600",0,3.912947,null,"Os09g0380200",1.5105882,"Os03g0337600",2.157176,{"$nulls":81},"LEA11","OsLEA11","LATE EMBRYOGENESIS ABUNDANT PROTEIN 11","late embryogenesis abundant protein 11",3," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress",null,null,"Os03g0400700","LOC_Os03g28260.1"]
[{"$nulls":26},"Os02g0731700",0,1.7829956,null,"Os09g0487700",1.5100183,"Os12g0418900",2.1587243,{"$nulls":81},"LEA16","OsLEA16","LATE EMBRYOGENESIS ABUNDANT PROTEIN 16","late embryogenesis abundant protein 16",3," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os03g0168100","LOC_Os03g07180.3, LOC_Os03g07180.2, LOC_Os03g07180.1"]
[{"$nulls":26},"Os04g0640700",0,4.935722,null,"Os10g0437600",1.5073477,"Os11g0544800",2.1625051,{"$nulls":81},"Hb2","HB2, OsHB2, OsNSHB2, hb2, GLB1b, ORYsa GLB1b, OsPgb1.2, Pgb1.2","HEMOGLOBIN 2","non-symbiotic hemoglobin 2, Non-legume hemoglobin, Phytogb1.2, phytoglobin 1.2",3," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0010167 - response to nitrate, GO:0005886 - plasma membrane, GO:0019825 - oxygen binding, GO:0020037 - heme binding, GO:0080033 - response to nitrite, GO:0005618 - cell wall, GO:0010229 - inflorescence development, GO:0051592 - response to calcium ion, GO:0015671 - oxygen transport, GO:0005829 - cytosol","TO:0000605 - hydrogen peroxide content, TO:0000006 - calcium sensitivity, TO:0000480 - nutrient sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000008 - potassium sensitivity, TO:0000609 - potassium content, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage ","Os03g0226200","LOC_Os03g12510.1"]
[{"$nulls":26},"Os03g0315800",2.8938558,2.555285,null,"Os07g0531900",1.5055022,"Os10g0378100",2.1656606,{"$nulls":81},"_","OsGR3, GR3","_","glutathione reductase 3",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus, GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0050660 - FAD binding, GO:0005507 - copper ion binding, GO:0045454 - cell redox homeostasis, GO:0009635 - response to herbicide, GO:0009651 - response to salt stress, GO:0004362 - glutathione-disulfide reductase activity, GO:0009570 - chloroplast stroma, GO:0006979 - response to oxidative stress, GO:0006749 - glutathione metabolic process, GO:0032928 - regulation of superoxide release, GO:0042542 - response to hydrogen peroxide, GO:0005739 - mitochondrion","TO:0000058 - herbicide sensitivity, TO:0000303 - cold tolerance, TO:0000015 - oxygen sensitivity, TO:0000276 - drought tolerance, TO:0000429 - salt sensitivity, TO:0002657 - oxidative stress",null,"Os10g0415300","LOC_Os10g28000.1"]
[{"$nulls":26},"Os02g0510200",0,1.0548363,null,"Os01g0335600",1.4992286,"Os03g0817100",2.172726,{"$nulls":81},"_","OsDUF26, CRRSP, OsCRRSP55, CRRSP55","_","domain unknown function 26, Cys Rich Repeat Secretory Protein 55, cysteine-rich repeat secretory protein 55",3," Tolerance and resistance",{"$nulls":3},"Os03g0277600","LOC_Os03g16950.1"]
[{"$nulls":26},"Os03g0299900",0,1.0436913,null,"Os03g0624300",1.4973017,"Os05g0490900",2.1807158,{"$nulls":81},"_","OsMyb9, OsMyb8, OsMYB110, Myb9, Myb8, MYB110","_","myb transcription factor 9, transcription factor MYB9",10," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin","TO:0000675 - ferulic acid content, TO:0000615 - abscisic acid sensitivity, TO:0000168 - abiotic stress trait, TO:0000179 - biotic stress trait, TO:0000074 - blast disease",null,"Os10g0478300","LOC_Os10g33810.1"]
[{"$nulls":26},"Os11g0498600",0,2.6062984,null,"Os02g0699400",1.49328,"Os05g0171200",2.1845307,{"$nulls":81},"_","OsIBR5, IBR5, OsPP85","_","MAPK phosphatase IBR5, indole-3-butyric acid-response 5, Protein phosphatase 85",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0004725 - protein tyrosine phosphatase activity, GO:0033549 - MAP kinase phosphatase activity, GO:0008138 - protein tyrosine/serine/threonine phosphatase activity, GO:0035335 - peptidyl-tyrosine dephosphorylation, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus",null,null,"Os06g0308100","LOC_Os06g20340.1, LOC_Os06g20340.2"]
[{"$nulls":26},"Os02g0253700",0,1.8251814,null,"Os11g0229600",1.4849981,"Os06g0329350",2.1970832,{"$nulls":81},"GS2","OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2, GS2/GL2, LGS1, OsLGS1","GRAIN SIZE 2","growth-regulating factor4, Growth-Regulating Factor 4, GRAIN SIZE ON CHROMOSOME 2, PANICLE TRAITS 2, grain length and width 2, Large Grain Size 1",2," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - Inflorescence,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0009755 - hormone-mediated signaling, GO:0009409 - response to cold, GO:0030307 - positive regulation of cell growth, GO:0030308 - negative regulation of cell growth, GO:0080006 - internode patterning, GO:0040008 - regulation of growth, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0009739 - response to gibberellin stimulus, GO:0051302 - regulation of cell division, GO:0002213 - defense response to insect, GO:0051781 - positive regulation of cell division, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0009834 - secondary cell wall biogenesis, GO:0010229 - inflorescence development, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, GO:0050832 - defense response to fungus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016563 - transcription activator activity, GO:0051510 - regulation of unidimensional cell growth","TO:0000620 - embryo development trait, TO:0002616 - flowering time, TO:0000207 - plant height, TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0000653 - seed development trait, TO:0000271 - inflorescence length, TO:0000396 - grain yield, TO:0002660 - cytokinin content, TO:0000473 - grain shattering, TO:0000734 - grain length, TO:0000621 - inflorescence development trait, TO:0000166 - gibberellic acid sensitivity, TO:0000382 - 1000-seed weight, TO:0000424 - brown planthopper resistance, TO:0000040 - panicle length, TO:0000303 - cold tolerance, TO:0002730 - grain shape, TO:0000397 - grain size, TO:0000402 - grain width, TO:0000074 - blast disease, TO:0000592 - 1000-dehulled grain weight","PO:0000037 - shoot apex , PO:0000025 - root tip , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage ","Os02g0701300","LOC_Os02g47280.2, LOC_Os02g47280.1"]
[{"$nulls":26},"Os12g0420400",0,2.9661806,null,"Os03g0117000",1.4809027,"Os03g0799200",2.2116792,{"$nulls":81},"TDC1","OsTDC, TDC, TDC2, OsTDC1, OsTDC4","TRYPTOPHAN DECARBOXYLASE 1","Trp decarboxylase 1, tryptophan decarboxylase",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009851 - auxin biosynthetic process, GO:0009651 - response to salt stress, GO:0006587 - serotonin biosynthetic process from tryptophan, GO:0009411 - response to UV, GO:0009725 - response to hormone stimulus, GO:0007623 - circadian rhythm, GO:0005737 - cytoplasm, GO:0030170 - pyridoxal phosphate binding, GO:0016831 - carboxy-lyase activity, GO:0009409 - response to cold, GO:0006520 - cellular amino acid metabolic process","TO:0000303 - cold tolerance, TO:0000401 - plant growth hormone sensitivity, TO:0000160 - UV light sensitivity","PO:0009005 - root , PO:0007010 - whole plant fruit ripening stage ","Os08g0140300","LOC_Os08g04540.1"]
[{"$nulls":26},"Os06g0320500",0,2.7043002,null,"Os09g0526800",1.4788502,"Os05g0554000",2.2158854,{"$nulls":81},"BBX7","OsN, OsBBX7, OsCCT08, OsCCT8, OsDTH2, CCT08, CCT8, DTH2","_","CONSTANS-like gene N, B-box-containing protein 7, CCT domain-containing gene 8, CCT (CO, CO-LIKE and TOC1) domain protein 8, CCT domain protein 8",2," Vegetative organ - Culm,  Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0007623 - circadian rhythm, GO:0009409 - response to cold, GO:0048579 - negative regulation of long-day photoperiodism, flowering, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0008270 - zinc ion binding, GO:0010039 - response to iron ion, GO:0009739 - response to gibberellin stimulus, GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus, GO:0010045 - response to nickel ion","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000137 - days to heading, TO:0000207 - plant height, TO:0000166 - gibberellic acid sensitivity, TO:0002616 - flowering time, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000224 - iron sensitivity","PO:0009010 - seed , PO:0009089 - endosperm , PO:0009006 - shoot system , PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0007616 - flowering stage ","Os02g0724000","LOC_Os02g49230.4, LOC_Os02g49230.6, LOC_Os02g49230.5, LOC_Os02g49230.1, LOC_Os02g49230.2, LOC_Os02g49230.3"]
[{"$nulls":30},"Os09g0365100",1.4753364,"Os02g0153300",2.2276309,{"$nulls":81},"NAC10","ONAC010, ONAC10, OsSTA199, OsNAC3, NAC3","NAC DOMAIN-CONTAINING PROTEIN 10","NAC domain-containing protein 010, Grain Protein Content 2 homolog, GPC-B2 homolog, NAC domain-containing protein 10",7," Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0051607 - defense response to virus, GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent","TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000386 - rice ragged stunt virus resistance","PO:0009066 - anther ","Os07g0566500","LOC_Os07g37920.1"]
[{"$nulls":30},"Os03g0348800",1.4721016,"Os10g0492300",2.230601,{"$nulls":81},"AKT1","OsAKT1, Os-AKT1","_","salt-sensitive K1 uptake channel OsAKT1, K+ channel alpha subunit",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0016021 - integral to membrane, GO:0055078 - sodium ion homeostasis, GO:0048767 - root hair elongation, GO:0055075 - potassium ion homeostasis, GO:0009860 - pollen tube growth, GO:0009651 - response to salt stress, GO:0005249 - voltage-gated potassium channel activity, GO:0042594 - response to starvation, GO:0042742 - defense response to bacterium, GO:0006970 - response to osmotic stress","TO:0000095 - osmotic response sensitivity, TO:0000514 - potassium uptake, TO:0000513 - potassium concentration, TO:0000175 - bacterial blight disease resistance, TO:0000609 - potassium content, TO:0000527 - sodium uptake, TO:0006001 - salt tolerance, TO:0000526 - sodium concentration, TO:0000276 - drought tolerance, TO:0000608 - sodium content","PO:0025181 - root elongation zone , PO:0025034 - leaf , PO:0009006 - shoot system , PO:0009010 - seed , PO:0009005 - root ","Os01g0648000","LOC_Os01g45990.1"]
[{"$nulls":30},"Os11g0305300",1.4695687,"Os08g0208200",2.2369096,{"$nulls":81},"PGIP7","Ospgip7, pgip7, OsPGIP7","POLYGALACTURONASE-INHIBITING PROTEIN 7","Polygalacturonase-inhibiting protein 7, polygalacturonase inhibiting protein 7",9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0006952 - defense response","TO:0000203 - bacterial leaf streak disease resistance",null,"Os09g0491612","LOC_Os09g31450.1"]
[{"$nulls":30},"Os02g0612800",1.4692372,"Os11g0157200",2.240785,{"$nulls":81},"LOX1","OsLOX1, OsLOX5","LIPOXYGENASE 1","lipoxygenase 1",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance","GO:0005506 - iron ion binding, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0016165 - lipoxygenase activity, GO:0002213 - defense response to insect, GO:0031408 - oxylipin biosynthetic process","TO:0000424 - brown planthopper resistance, TO:0000112 - disease resistance",null,"Os02g0194700 ","LOC_Os02g10120.1"]
[{"$nulls":30},"Os02g0296800",1.4630122,"Os12g0113600",2.2466476,{"$nulls":81},"HSP18.0-CIII","OsHSP18.0-CIII","18.0-KD CLASS III HEAT SHOCK PROTEIN","18.0 kDa class III heat shock protein, 18.0-kD class III heat shock protein",2," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0005737 - cytoplasm, GO:0006457 - protein folding, GO:0042542 - response to hydrogen peroxide, GO:0009644 - response to high light intensity","TO:0000259 - heat tolerance",null,"Os02g0782500","LOC_Os02g54140.1"]
[{"$nulls":30},"Os12g0108100",1.4555353,"Os04g0548700",2.2563107,{"$nulls":81},"PHO1;2","OsPHO1;2, PHO1.2, OsPHO1.2, PHO1","PHOSPHATE TRANSPORTER 1;2","PHOSPHATE1;2, PHOSPHATE1.2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006817 - phosphate transport, GO:0005886 - plasma membrane, GO:0046685 - response to arsenic, GO:0005802 - trans-Golgi network, GO:0016021 - integral to membrane",null,null,"Os02g0809800","LOC_Os02g56510.1"]
[{"$nulls":30},"Os10g0477100",1.4529165,"Os06g0696566",2.2583885,{"$nulls":81},"PIM","Pi-m, Pik-m(Pi m), Pik-m, Pi m, Pi-km","PYRICULARIA ORYZAE RESISTANCE M","Pyricularia oryzae resistance m, Magnaporthe grisea resistance-m, Blast resistance m",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000477 - panicle blast disease resistance, TO:0000504 - leaf temperature, TO:0000468 - leaf blast disease resistance","PO:0009025 - vascular leaf "]
[{"$nulls":30},"Os09g0413600",1.4465095,"Os04g0544400",2.26373,{"$nulls":81},"RSOSPR10","RSOsPR10, RsOsPR10a, OsPR10a, OsPR10alpha, OsPR10, PR10","ROOT-SPECIFIC ORYZA SATIVA PR10","root-specific Oryza sativa PR10, root specific rice PR10, root-specific OsPR10a, Root specific pathogenesis-related protein 10",12," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0046688 - response to copper ion, GO:0052543 - callose deposition in cell wall, GO:0009607 - response to biotic stimulus, GO:0006952 - defense response, GO:0010431 - seed maturation, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0043086 - negative regulation of catalytic activity, GO:0010427 - abscisic acid binding, GO:0009738 - abscisic acid mediated signaling, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0004872 - receptor activity, GO:0004864 - phosphoprotein phosphatase inhibitor activity, GO:0009743 - response to carbohydrate stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0048364 - root development","TO:0000021 - copper sensitivity, TO:0000656 - root development trait, TO:0000074 - blast disease, TO:0000261 - insect damage resistance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002661 - seed maturation, TO:0000172 - jasmonic acid sensitivity","PO:0007520 - root development stage , PO:0007632 - seed maturation stage ","Os12g0555000 ","LOC_Os12g36830.1"]
[{"$nulls":30},"Os03g0305500",1.4425586,"Os01g0861700",2.2653432,{"$nulls":81},"CML11","OsCML11","CALMODULIN-LIKE PROTEIN 11","calmodulin-like protein 11",1," Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding, GO:0000325 - plant-type vacuole, GO:0043269 - regulation of ion transport",null,null,"Os01g0505600","LOC_Os01g32120.1"]
[{"$nulls":30},"Os09g0531900",1.4401788,"Os07g0520600",2.2696192,{"$nulls":81},"CML8","OsCML8","CALMODULIN-LIKE PROTEIN 8","calmodulin-like protein 8",10," Tolerance and resistance - Stress tolerance","GO:0005509 - calcium ion binding",null,null,"Os10g0389000","LOC_Os10g25010.1"]
[{"$nulls":30},"Os11g0556466",1.4354072,"Os03g0158300",2.281271,{"$nulls":81},"_","OsGLU3, OsGH9A2, GLU3, GH9A2","_","endo-1, 4-b-D-glucanase 3, glycoside hydrolase OsGH9A2, glycoside hydrolase 9A2",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0070482 - response to oxygen levels, GO:0030245 - cellulose catabolic process, GO:0016021 - integral to membrane, GO:0008810 - cellulase activity","TO:0000015 - oxygen sensitivity",null,"Os04g0497200","LOC_Os04g41970.1"]
[{"$nulls":30},"Os05g0439100",1.4339188,"Os01g0292700",2.2945359,{"$nulls":81},"ERF42","OsERF#042, OsERF042, OsERF42, AP2/EREBP#048, AP2/EREBP48, OsDREB2B, OsDREB2B2, OsDREB2A","ETHYLENE RESPONSE FACTOR 42","ethylene response factor 42, APETALA2/ethylene-responsive element binding protein 48, dehydration-responsive element-binding protein 2B",5," Tolerance and resistance - Stress tolerance","GO:0003700 - transcription factor activity, GO:0009408 - response to heat, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0009409 - response to cold, GO:0003677 - DNA binding, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os05g0346200","LOC_Os05g27930.4, LOC_Os05g27930.3, LOC_Os05g27930.2, LOC_Os05g27930.1"]
[{"$nulls":30},"Os08g0520500",1.4312531,"Os08g0515800",2.3015,{"$nulls":81},"ERF50","OsERF#050, OsERF050, OsERF50, AP2/EREBP#113, AP2/EREBP113, OsDREB6","ETHYLENE RESPONSE FACTOR 50","ethylene response factor 50, APETALA2/ethylene-responsive element binding protein 113, dehydration-responsive element-binding protein 6",9," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006970 - response to osmotic stress, GO:0006351 - transcription, DNA-dependent, GO:0009409 - response to cold, GO:0003700 - transcription factor activity","TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance",null,"Os09g0369000","LOC_Os09g20350.1"]
[{"$nulls":30},"Os08g0341700",1.4246349,"Os01g0823500",2.3226073,{"$nulls":81},"ERF71","OsERF#071, OsERF071, OsERF71, AP2/EREBP#124, AP2/EREBP124, OsERF15","ETHYLENE RESPONSE FACTOR 71","ethylene response factor 71, APETALA2/ethylene-responsive element binding protein 124, ethylene response factor 15",6," Vegetative organ - Root,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0009753 - response to jasmonic acid stimulus, GO:0009611 - response to wounding, GO:0042545 - cell wall modification, GO:0009414 - response to water deprivation, GO:0003677 - DNA binding, GO:0003700 - transcription factor activity, GO:0006351 - transcription, DNA-dependent, GO:0048364 - root development","TO:0000172 - jasmonic acid sensitivity, TO:0000656 - root development trait, TO:0000043 - root anatomy and morphology trait, TO:0000276 - drought tolerance","PO:0007520 - root development stage , PO:0006085 - root meristem , PO:0006203 - pericycle , PO:0005059 - root endodermis ","Os06g0194000","LOC_Os06g09390.1, LOC_Os06g09390.2"]
[{"$nulls":30},"Os09g0528200",1.4219437,"Os01g0207500",2.3336618,{"$nulls":81},"ERF123","OsERF#123, OsERF123, AP2/EREBP#066, AP2/EREBP66","ETHYLENE RESPONSE FACTOR 123","ethylene response factor 123, APETALA2/ethylene-responsive element binding protein 66",9," Tolerance and resistance - Disease resistance,  Other","GO:0042742 - defense response to bacterium, GO:0003700 - transcription factor activity, GO:0003677 - DNA binding, GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0010200 - response to chitin","TO:0000175 - bacterial blight disease resistance",null,"Os09g0571700","LOC_Os09g39810.1"]
[{"$nulls":30},"Os11g0527300",1.4193603,"Os04g0461100",2.3429642,{"$nulls":81},"AP2/EREBP129","AP2/EREBP#129, OsRAV2, RAV2, OsRAV9/OsTEM1, OsRAV9/OsTEM1, OsRAV9, OsTEM1, RAV9, TEM1","APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 129","APETALA2/ethylene-responsive element binding protein 129, related to ABI3/VP1-2, RAV subfamily member 2, TEMPRANILLO1",1," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Other","GO:0048573 - photoperiodism, flowering, GO:0009651 - response to salt stress, GO:0009741 - response to brassinosteroid stimulus, GO:0009910 - negative regulation of flower development, GO:0048366 - leaf development, GO:0003677 - DNA binding, GO:0007623 - circadian rhythm, GO:0003700 - transcription factor activity, GO:0009751 - response to salicylic acid stimulus, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0048510 - regulation of timing of transition from vegetative to reproductive phase, GO:0003006 - reproductive developmental process, GO:0048527 - lateral root development","TO:0006001 - salt tolerance, TO:0000137 - days to heading","PO:0008039 - stem base , PO:0020148 - shoot apical meristem , PO:0009005 - root , PO:0025034 - leaf ","Os01g0141000","LOC_Os01g04800.1"]
[{"$nulls":30},"Os08g0235800",1.4134728,"Os03g0421800",2.3464868,{"$nulls":81},"WJUMK1","OsMPK20-4, MPK20-4, OsWJUMK, OsWJUMK1, WJUMK, MAPK8, OsMPK8, MPK8, OsMAPK20-4, MAPK20-4, OsMPKG1, MPKG1","WOUND- AND JA-UNINDUCIBLE MAP KINASE 1","MAP kinase 20-4, Wound- and JA-uninducible MAP kinase 1",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0009814 - defense response, incompatible interaction, GO:0002213 - defense response to insect, GO:0002237 - response to molecule of bacterial origin, GO:0004707 - MAP kinase activity, GO:0000165 - MAPKKK cascade","TO:0000615 - abscisic acid sensitivity, TO:0000424 - brown planthopper resistance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance",null,"Os01g0665200","LOC_Os01g47530.3, LOC_Os01g47530.4, LOC_Os01g47530.2, LOC_Os01g47530.1"]
[{"$nulls":30},"Os08g0429200",1.4130808,"Os01g0803300",2.3495276,{"$nulls":81},"_","OsWD40-2, UV-DDB2, OsUV-DDB2","_","UV-damaged DNA binding protein 2, Ultraviolet-damaged DNA binding protein 2",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010224 - response to UV-B, GO:0005634 - nucleus, GO:0006281 - DNA repair",null,null,"Os01g0141700","LOC_Os01g04870.1"]
[{"$nulls":30},"Os04g0583000",1.4076887,"Os08g0518000",2.3593893,{"$nulls":81},"_","OsWD40-159, Cen8.t00757, OseIF3i, eIF3i, EIF3I","_","EUKARYOTIC INITIATION FACTOR 3I, \\eukaryotic translation initiation factor 3, subunit i\\\"\"",8," Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0001731 - formation of translation preinitiation complex, GO:0003743 - translation initiation factor activity, GO:0005852 - eukaryotic translation initiation factor 3 complex, GO:0006446 - regulation of translational initiation, GO:0016282 - eukaryotic 43S preinitiation complex, GO:0033290 - eukaryotic 48S preinitiation complex, GO:0046686 - response to cadmium ion, GO:0080008 - CUL4 RING ubiquitin ligase complex",null,null,"Os08g0308100","LOC_Os08g21660.1, LOC_Os08g21660.2"]
[{"$nulls":30},"Os03g0423850",1.4042592,"Os08g0504500",2.366072,{"$nulls":81},"_","CHR723, OsCHR723","_","CHD-related gene 723",6," Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0005524 - ATP binding, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os06g0102800/Os06g0102900","LOC_Os06g01320.1"]
[{"$nulls":30},"Os03g0272900",1.4012619,"Os02g0553200",2.374568,{"$nulls":81},"IAA1","OsIAA1, OsIAA4","AUX/IAA PROTEIN 1","Aux/IAA protein 1",1," Tolerance and resistance - Stress tolerance","GO:0009733 - response to auxin stimulus, GO:0042594 - response to starvation","TO:0000163 - auxin sensitivity",null,"Os01g0178500 ","LOC_Os01g08320.1"]
[{"$nulls":30},"Os09g0460350",1.3974686,"Os01g0730800",2.3814182,{"$nulls":81},"IAA14","OsIAA14, AUX/IAA14, OsAUX/IAA14","_","Aux/IAA protein 14",3," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009733 - response to auxin stimulus, GO:0009408 - response to heat, GO:0009734 - auxin mediated signaling pathway, GO:0006351 - transcription, DNA-dependent","TO:0000259 - heat tolerance",null,"Os03g0797800 ","LOC_Os03g58350.1"]
[{"$nulls":30},"Os09g0525400",1.3958011,"Os10g0150600",2.3875122,{"$nulls":81},"RAI1","OsRAI1, OsbHLH003, bHLH003, bHLH3","RAC IMMUNITY 1","Rac Immunity1, Rac Immunity 1, basic helix-loop-helix protein 003",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0030912 - response to deep water, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0003700 - transcription factor activity, GO:0009409 - response to cold","TO:0000074 - blast disease, TO:0000112 - disease resistance, TO:0000524 - submergence tolerance, TO:0000303 - cold tolerance",null,"Os03g0135700","LOC_Os03g04310.1, LOC_Os03g04310.2"]
[{"$nulls":30},"Os01g0711400",1.3911031,"Os08g0546700",2.3912983,{"$nulls":81},"COI1","OsCOI1a, OsCOI1, Os_F0728, COI1a, F0728","CORONATINE INSENSITIVE 1","coronatine insensitive 1a, CORONATINE INSENSITIVE1, coronatine insensitive 1",1," Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, GO:0080027 - response to herbivore, GO:0010150 - leaf senescence, GO:0002213 - defense response to insect, GO:0009909 - regulation of flower development, GO:0009611 - response to wounding, GO:0019005 - SCF ubiquitin ligase complex, GO:0031348 - negative regulation of defense response, GO:0010218 - response to far red light, GO:0042742 - defense response to bacterium, GO:0009625 - response to insect, GO:0009754 - detection of jasmonic acid stimulus, GO:0010118 - stomatal movement, GO:0009641 - shade avoidance, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000249 - leaf senescence, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000261 - insect damage resistance, TO:0000031 - silicon sensitivity, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0853400","LOC_Os01g63420.2, LOC_Os01g63420.3, LOC_Os01g63420.1"]
[{"$nulls":30},"Os05g0154600",1.3874264,"Os12g0124000",2.4036343,{"$nulls":81},"GELP78","OsGELP78, OsEnS-82, EnS-82, OsGLIP2, GLIP2","GDSL ESTERASE/LIPASE PROTEIN 78","GDSL esterase/lipase protein 78, endosperm-specific gene 82, GDSL lipase 2",6," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0006629 - lipid metabolic process, GO:0016298 - lipase activity, GO:0019216 - regulation of lipid metabolic process, GO:0005811 - lipid particle, GO:0005789 - endoplasmic reticulum membrane, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0055088 - lipid homeostasis, GO:0031348 - negative regulation of defense response","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0020142 - stem internode , PO:0020141 - stem node ","Os06g0156700","LOC_Os06g06260.1"]
[{"$nulls":30},"Os05g0575500",1.3836101,"Os02g0760200",2.4074242,{"$nulls":81},"_","OsDRF1, OsFbox209, Os_F0001","_","defense-related F-box protein 1, F-box protein 209",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0006417 - regulation of translation, GO:0005634 - nucleus, GO:0005739 - mitochondrion",null,null,"Os04g0431200","LOC_Os04g35190.1"]
[{"$nulls":30},"Os07g0185000",1.3703922,"Os02g0129300",2.4234896,{"$nulls":81},"MTI4A","OsMT1a, OsMT1a1, OsMT1a2, OsMT-I-4a, OsIDS1, OsMT1b, MT1b","METALLOTHIONEIN I-4A","Metallothionein 1a, type 1 metallothionein a1, type 1 metallothionein a2, Metallothionein protein OsIDS1",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0005634 - nucleus, GO:0010618 - aerenchyma formation, GO:0005507 - copper ion binding, GO:0006950 - response to stress, GO:0009628 - response to abiotic stimulus","TO:0000168 - abiotic stress trait, TO:0000103 - deepwater stress",null,"Os12g0570700","LOC_Os12g38270.1, LOC_Os12g38270.2"]
[{"$nulls":30},"Os12g0445300",1.3675637,"Os07g0158800",2.4373477,{"$nulls":81},"_","OsDjC8","_","DnaJ domain protein C8",1," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress",null,null,"Os01g0521500","LOC_Os01g33800.1, LOC_Os01g33800.2"]
[{"$nulls":30},"Os10g0519500",1.3661638,"Os11g0169200",2.4397767,{"$nulls":81},"BPH33","OsDjC10, DjC10, Bph33(t), Bph33","BROWN PLANTHOPPER RESISTANCE 33","DnaJ domain protein C10",1," Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0009414 - response to water deprivation, GO:0002213 - defense response to insect","TO:0000276 - drought tolerance, TO:0000424 - brown planthopper resistance",null,"Os01g0606900","LOC_Os01g42190.1"]
[{"$nulls":30},"Os09g0485600",1.3620481,"Os07g0686600",2.4509923,{"$nulls":81},"_","OsDjC34","_","DnaJ domain protein C34",3," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress",null,null,"Os03g0761700","LOC_Os03g55360.1"]
[{"$nulls":30},"Os04g0182650",1.3579935,"Os08g0393600",2.46861,{"$nulls":81},"_","OsDjC68","_","DnaJ domain protein C68",9," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress",null,null,"Os09g0460000","LOC_Os09g28590.1, LOC_Os09g28590.2, LOC_Os09g28590.3"]
[{"$nulls":30},"Os01g0172400",1.3577285,"Os08g0236700",2.4697306,{"$nulls":81},"_","OsDjC82, DjC82, XB21","_","DnaJ domain protein C82, XA21 binding protein 21",12," Tolerance and resistance - Disease resistance","GO:0005886 - plasma membrane, GO:0045807 - positive regulation of endocytosis, GO:0042742 - defense response to bacterium, GO:0010940 - positive regulation of necrotic cell death, GO:0005829 - cytosol","TO:0000175 - bacterial blight disease resistance",null,"Os12g0548200","LOC_Os12g36180.1"]
[{"$nulls":30},"Os09g0431900",1.3538241,"Os08g0427700",2.4794953,{"$nulls":81},"_","OsECS, ECS, GSH2, OsGSH2","_","gamma-glutamylcysteine synthetase",5," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010193 - response to ozone, GO:0009409 - response to cold, GO:0052544 - callose deposition in cell wall during defense response, GO:0046688 - response to copper ion, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0009570 - chloroplast stroma, GO:0019761 - glucosinolate biosynthetic process, GO:0004357 - glutamate-cysteine ligase activity, GO:0005524 - ATP binding, GO:0009753 - response to jasmonic acid stimulus, GO:0009408 - response to heat, GO:0046686 - response to cadmium ion, GO:0009700 - indole phytoalexin biosynthetic process, GO:0006750 - glutathione biosynthetic process, GO:0009908 - flower development, GO:0050832 - defense response to fungus, GO:0002213 - defense response to insect","TO:0000303 - cold tolerance, TO:0000021 - copper sensitivity",null,"Os05g0129000","LOC_Os05g03820.3, LOC_Os05g03820.1, LOC_Os05g03820.2"]
[{"$nulls":30},"Os08g0528500",1.3523855,"Os08g0390100",2.482869,{"$nulls":81},"_","UTR319","_","UV Tolerant Rice 319",7," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os07g0265100","LOC_Os07g16150.1"]
[{"$nulls":30},"Os05g0567300",1.3482547,"Os10g0496900",2.4886959,{"$nulls":81},"RLCK55","OsRLCK55","RECEPTOR-LIKE CYTOPLASMIC KINASE 55","Receptor-like Cytoplasmic Kinase 55",1," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005886 - plasma membrane, GO:0042742 - defense response to bacterium","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance",null,"Os01g0936100","LOC_Os01g71000.1"]
[{"$nulls":30},"Os02g0233100",1.3427882,"Os11g0287000",2.493047,{"$nulls":81},"_","RD22, OsBURP03, OsBURP3","_","BURP domain-containing protein 3",1," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os01g0733500","LOC_Os01g53240.1"]
[{"$nulls":30},"Os06g0712200",1.336702,"Os03g0122200",2.5056727,{"$nulls":81},"_","OsTCP6, TCP6","_","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 6",1," Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0005739 - mitochondrion, GO:0005634 - nucleus, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os01g0924400","LOC_Os01g69980.1"]
[{"$nulls":30},"Os11g0655300",1.3325297,"Os01g0881900",2.5102894,{"$nulls":81},"FKII","OsFKII, OsFK1, FK1","FRUCTOKINASE II","Fructokinase, fructokinase II, Fructokinase 1, Fructokinase-2",8," Biochemical character,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0005829 - cytosol, GO:0006000 - fructose metabolic process, GO:0019252 - starch biosynthetic process, GO:0046688 - response to copper ion, GO:0008865 - fructokinase activity","TO:0000021 - copper sensitivity",null,"Os08g0113100 ","LOC_Os08g02120.1"]
[{"$nulls":30},"Os10g0456600",1.3291941,"Os02g0817900",2.516514,{"$nulls":81},"_","OsGH","_","glycosyl hydrolase",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0005975 - carbohydrate metabolic process",null,null,"Os08g0518800","LOC_Os08g40680.1"]
[{"$nulls":30},"Os03g0414100",1.3267275,"Os01g0134500",2.5228798,{"$nulls":81},"_","OsLRR","_","NBS-LRR disease resistance protein",11," Tolerance and resistance - Stress tolerance","GO:0043531 - ADP binding, GO:0006952 - defense response",null,null,"Os11g0227200 ","LOC_Os11g12000.1"]
[{"$nulls":30},"Os06g0163000",1.324289,"Os02g0280500",2.5372534,{"$nulls":81},"ADF2","OsADF","ACTIN DEPOLYMERIZING FACTOR 2","actin depolymerizing factor 2",3," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0015629 - actin cytoskeleton, GO:0003779 - actin binding, GO:0030042 - actin filament depolymerization, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os03g0780400","LOC_Os03g56790.1"]
[{"$nulls":30},"Os04g0442000",1.3238521,"Os06g0536100",2.5390456,{"$nulls":81},"ADF3","OsADF3","ACTIN DEPOLYMERIZING FACTOR 3","actin depolymerizing factor 3",3," Tolerance and resistance - Stress tolerance","GO:0015629 - actin cytoskeleton, GO:0006950 - response to stress, GO:0009409 - response to cold, GO:0030042 - actin filament depolymerization","TO:0000303 - cold tolerance",null,"Os03g0820500","LOC_Os03g60580.1"]
[{"$nulls":30},"Os08g0274700",1.3190674,"Os03g0425000",2.554466,{"$nulls":81},"_","OsCHB701, CHB701","_","SWIRM domain-containing protein CHB701",12," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os12g0176700","LOC_Os12g07730.1"]
[{"$nulls":30},"Os04g0445700",1.3174461,"Os02g0533300",2.5680068,{"$nulls":81},"RBBI2-1","RBBI2-1","BOWMAN-BIRK INHIBITOR 2-1",null,1," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0006979 - response to oxidative stress, GO:0005576 - extracellular region, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0006952 - defense response","TO:0000168 - abiotic stress trait, TO:0000276 - drought tolerance, TO:0000179 - biotic stress trait",null,"Os01g0124000","LOC_Os01g03320.1"]
[{"$nulls":30},"Os01g0874700",1.3171039,"Os04g0692600",2.5747168,{"$nulls":81},"RBBI2-3","RBBI2-3","BOWMAN-BIRK INHIBITOR 2-3",null,1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0005576 - extracellular region",null,null,"Os01g0124650","LOC_Os01g03390.1"]
[{"$nulls":30},"Os02g0672200",1.3151616,"Os03g0288900",2.5776331,{"$nulls":81},"PAL","OsPAL, OsPAL08, PAL2, GP-28, GP28, PAL08, OsPAL2, OsPAL8, PAL8","PHENYLALANINE AMMONIA-LYASE","phenylalanine ammonia-lyase, phenylalanine ammonia-lyase 2",2," Biochemical character,  Vegetative organ - Leaf,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide, GO:0009751 - response to salicylic acid stimulus, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0009718 - anthocyanin biosynthetic process, GO:0002215 - defense response to nematode, GO:0005737 - cytoplasm, GO:0006559 - L-phenylalanine catabolic process, GO:0009800 - cinnamic acid biosynthetic process, GO:0009411 - response to UV, GO:0009807 - lignan biosynthetic process, GO:0002213 - defense response to insect","TO:0000160 - UV light sensitivity, TO:0000731 - lignin content, TO:0000074 - blast disease, TO:0000384 - nematode damage resistance, TO:0000733 - lignin biosynthesis trait, TO:0000424 - brown planthopper resistance, TO:0000326 - leaf color, TO:0000058 - herbicide sensitivity",null,"Os02g0626400","LOC_Os02g41650.2, LOC_Os02g41650.1, LOC_Os02g41650.3"]
[{"$nulls":30},"Os03g0308800",1.3063307,"Os01g0303600",2.591104,{"$nulls":81},"MIR156G","miR156g, OsmiR156g, osmiR156g, osa-miR156g, osa-MIR156gosa-miR156g-3p osa-miR156g-5p","MICRORNA156G","micro RNA 156g, microRNA156g, osa-miRNA156g",9," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0050832 - defense response to fungus, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex","TO:0000074 - blast disease, TO:0000429 - salt sensitivity"]
[{"$nulls":30},"Os03g0296700",1.3035463,"Os06g0152800",2.5942593,{"$nulls":81},"MIR156K","miR156k, OsmiR156k, osmiR156k, osa-miR156k, osa-MIR156k","MICRORNA156K","micro RNA 156k, microRNA156k, osa-miRNA156k",9," Tolerance and resistance - Stress tolerance,  Other","GO:0046686 - response to cadmium ion, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA"]
[{"$nulls":30},"Os11g0229333",1.3010575,"Os11g0184300",2.6101954,{"$nulls":81},"MIR166D","miR166d, osa-miR166dosa-miR166d-3p osa-miR166d-5p","MICRORNA166D","MICRORNA166d, osa-miRNA166d",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006379 - mRNA cleavage, GO:0050832 - defense response to fungus, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA","TO:0000429 - salt sensitivity, TO:0000074 - blast disease"]
[{"$nulls":30},"Os03g0726900",1.2955741,"Os09g0487200",2.6139994,{"$nulls":81},"MIR166K","miR166k, osa-miR166kosa-miR166k-3p osa-miR166k-5p","MICRORNA166K","MICRORNA166k, osa-miRNA166k",2," Tolerance and resistance - Stress tolerance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0046686 - response to cadmium ion, GO:0006379 - mRNA cleavage"]
[{"$nulls":30},"Os03g0280800",1.2921737,"Os08g0254500",2.6227434,{"$nulls":81},"MIR169H","miR169h, osa-miR169h, osa-MIR169h","MICRORNA169H","MICRORNA169h, osa-miRNA169h",8," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0006379 - mRNA cleavage, GO:0050832 - defense response to fungus, GO:0035195 - gene silencing by miRNA","TO:0000074 - blast disease"]
[{"$nulls":30},"Os01g0937300",1.2868139,"Os04g0249900",2.6271157,{"$nulls":81},"MIR171D","miR171d, osa-miR171dosa-miR171d-3p osa-miR171d-5p","MICRORNA171D","MICRORNA171d, osa-miRNA171d",10," Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex"]
[{"$nulls":30},"Os02g0757100",1.2817639,"Os03g0161600",2.6363022,{"$nulls":81},"MIR390","OsmiR390, miR390, osa-MIR390osa-miR390, osa-miR390-3p, osa-miR390-5p","MICRORNA390","rice microRNA390",3," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0046688 - response to copper ion, GO:0016442 - RNA-induced silencing complex, GO:0009409 - response to cold, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0046686 - response to cadmium ion, GO:0006379 - mRNA cleavage, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009733 - response to auxin stimulus, GO:0009411 - response to UV, GO:0010311 - lateral root formation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0006001 - salt tolerance, TO:0000160 - UV light sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000021 - copper sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000315 - bacterial disease resistance","PO:0005029 - root primordium , PO:0020121 - lateral root , PO:0000025 - root tip "]
[{"$nulls":30},"Os12g0237900",1.2768583,"Os03g0416200",2.6448455,{"$nulls":81},"MIR395H","OsmiR395h, miR395h, osa-MIR395h, OsamiR395h","MICRORNA395H","MICRORNA395h",8," Tolerance and resistance - Stress tolerance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0009970 - cellular response to sulfate starvation, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0055063 - sulfate ion homeostasis"]
[{"$nulls":30},"Os12g0477200",1.2716502,"Os03g0243700",2.6563866,{"$nulls":81},"MIR399B","OsmiR399b, osa-MIR399b, miR399b","MICRORNA399B","MICRORNA399b, osa-miRNA399b",2," Tolerance and resistance - Stress tolerance,  Other","GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex"]
[{"$nulls":30},"Os04g0529600",1.2700748,"Os06g0608700",2.6601543,{"$nulls":81},"MIR399G","OsmiR399g, osa-MIR399g","MICRORNA399G","MICRORNA399g",2," Tolerance and resistance - Stress tolerance,  Other","GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex"]
[{"$nulls":30},"Os01g0122701",1.2682127,"Os04g0357700",2.6619282,{"$nulls":81},"MIR444B","miR444b, osa-MIR444b, osa-miR444b, osa-miR444b.1, osa-miR444b.2","MICRORNA444B","MICRORNA444b",null," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0046686 - response to cadmium ion, GO:0016442 - RNA-induced silencing complex, GO:0009742 - brassinosteroid mediated signaling, GO:0006379 - mRNA cleavage, GO:0016132 - brassinosteroid biosynthetic process, GO:0060359 - response to ammonium ion, GO:0048364 - root development, GO:0035195 - gene silencing by miRNA","TO:0002676 - brassinosteroid content, TO:0000656 - root development trait, TO:0000227 - root length","PO:0007520 - root development stage , PO:0009005 - root "]
[{"$nulls":30},"Os10g0569100",1.2666517,"Os02g0617300",2.6805756,{"$nulls":81},"MIR820A","miR820a, osa-miR820a, osa-MIR820a, OsmiR820a","MICRORNA820A","MICRORNA820a, osa-miRNA820a",1," Tolerance and resistance - Stress tolerance,  Other","GO:0009651 - response to salt stress, GO:0035195 - gene silencing by miRNA, GO:0035068 - micro-ribonucleoprotein complex, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000259 - heat tolerance"]
[{"$nulls":30},"Os10g0457400",1.261734,"Os04g0677650",2.6887035,{"$nulls":81},"MIR1860","miR1860, osa-miR1860, osa-MIR1860osa-miR1860-3p osa-miR1860-5p","MICRORNA1860","MICRORNA1860, osa-miRNA1860",1," Tolerance and resistance - Stress tolerance,  Other","GO:0035195 - gene silencing by miRNA, GO:0006379 - mRNA cleavage, GO:0016442 - RNA-induced silencing complex, GO:0035068 - micro-ribonucleoprotein complex, GO:0009409 - response to cold","TO:0000303 - cold tolerance"]
[{"$nulls":30},"Os03g0273800",1.2573267,"Os05g0320500",2.704552,{"$nulls":81},"MIR812Q","miR812q, osa-miR812q, osa-MIR812q","MICRORNA812Q","MICRORNA812q, osa-miRNA812q",10," Tolerance and resistance - Stress tolerance,  Other","GO:0006379 - mRNA cleavage, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA"]
[{"$nulls":30},"Os09g0446800",1.2564974,"Os03g0283400",2.7073212,{"$nulls":81},"PI26","Pi26(t), Pi26","PYRICULARIA ORYZAE RESISTANCE 26","Pyricularia oryzae resistance 26, Magnaporthe grisea resistance 26, Blast resistance 26",6," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus"]
[{"$nulls":30},"Os05g0437900",1.2524716,"Os02g0302500",2.7167175,{"$nulls":81},"RNS2","OsRNS2","RIBONUCLEASE 2","RNase 2",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016036 - cellular response to phosphate starvation, GO:0033897 - ribonuclease T2 activity, GO:0003723 - RNA binding, GO:0042594 - response to starvation","TO:0000102 - phosphorus sensitivity","PO:0009049 - inflorescence , PO:0009046 - flower , PO:0009010 - seed , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os01g0897200","LOC_Os01g67180.1"]
[{"$nulls":30},"Os05g0193800",1.2478004,"Os04g0460300",2.7348843,{"$nulls":81},"_","OsSERL4, OsBAK1-9, Docs1","_","SERK-like gene 4, bri1-associated receptor kinase 1 (BAK1) homologue 9, defective in outer cell layer specification 1",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0048364 - root development, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0010044 - response to aluminum ion","TO:0000354 - aluminum sensitivity","PO:0007520 - root development stage ","Os02g0236100","LOC_Os02g14120.1"]
[{"$nulls":30},"Os08g0513300",1.2448906,"Os04g0465500",2.743817,{"$nulls":81},"POXA","poxA, prx126, OsPrx126, prxRPA, RPA","PEROXIDASE A","Peroxidase A, class III peroxidase 126",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0005634 - nucleus, GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0005737 - cytoplasm",null,null,"Os10g0109600","LOC_Os10g02070.1"]
[{"$nulls":30},"Os03g0223100",1.2419072,"Os11g0621400",2.7537477,{"$nulls":81},"PI56","Pi56, qBR9.1, Pi56(t)","PYRICULARIA ORYZAE RESISTANCE 56",null,9," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0009620 - response to fungus, GO:0006952 - defense response",null,null,"Os09g0328951","LOC_Os09g16000.1"]
[{"$nulls":30},"Os04g0485300",1.2326492,"Os10g0573000",2.759031,{"$nulls":81},"PID3","Pi-d3, Pid3, Pi25, Pid3-I1, qBRM6.2","PYRICULARIA ORYZAE RESISTANCE D3","Pyricularia oryzae resistance D3, Magnaporthe grisea resistance-D3, Blast resistance D3, Pyricularia oryzae resistance-d3, PIRICULARIA ORYZAE RESISTANCE IN DIGU 3",6," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0009620 - response to fungus","TO:0000468 - leaf blast disease resistance, TO:0000074 - blast disease",null,"Os06g0330100","LOC_Os06g22460.1"]
[{"$nulls":30},"Os01g0106900",1.2300868,"Os01g0827700",2.7648027,{"$nulls":81},"PIZY","Pi-zy, Pi-zy(t)","PYRICULARIA ORYZAE RESISTANCE ZY","Magnaporthe grisea resistance zy, Blast resistance zy",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus"]
[{"$nulls":30},"Os04g0668700",1.2270294,"Os10g0502000",2.7761078,{"$nulls":81},"FLO11","OsHsp70CP2, HSP70CP2, OsFLO11, OsFLO11-2, FLO11-2, cpHSP70-2, OsHsp70cp-2, Hsp70cp-2","FLOURY ENDOSPERM 11","heat shock protein 70 chloroplast protein 2, HEAT SHOCK PROTEIN 70KD CHLOROPLAST PROTEIN 2, FLOURY ENDOSPERM11-2, plastid HSP70-2, plastid-localized 70-kDa heat shock protein 2",12," Seed - Morphological traits - Endosperm,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009941 - chloroplast envelope, GO:0009570 - chloroplast stroma, GO:0005739 - mitochondrion, GO:0009960 - endosperm development, GO:0009660 - amyloplast organization, GO:0048046 - apoplast, GO:0009409 - response to cold, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0045036 - protein targeting to chloroplast, GO:0006457 - protein folding, GO:0005524 - ATP binding, GO:0009579 - thylakoid","TO:0000259 - heat tolerance, TO:0000266 - chalky endosperm","PO:0007633 - endosperm development stage ","Os12g0244100","LOC_Os12g14070.1"]
[{"$nulls":30},"Os06g0649600",1.225893,"Os07g0195300",2.7763774,{"$nulls":81},"PIR7B","Pir7b","PYRICULARIA ORYZAE RESISTANCE R7B","Pyricularia oryzae resistance R7b, Magnaporthe grisea resistance-R7b, Blast resistance R7b",1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004091 - carboxylesterase activity",null,null,"Os01g0934800","LOC_Os01g70850.2, LOC_Os01g70850.1"]
[{"$nulls":30},"Os06g0332800",1.2231752,"Os07g0252800",2.7828925,{"$nulls":81},"MIR2878","miR2878, osa-miR2878, osa-MIR2878, osa-miR2878-5p, osa-miR2878-3posa-miR2878-3p osa-miR2878-5p","MICRORNA2878","MICRORNA2878, osa-miRNA2878",8," Tolerance and resistance - Stress tolerance,  Other","GO:0035068 - micro-ribonucleoprotein complex, GO:0009414 - response to water deprivation, GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex","TO:0000276 - drought tolerance"]
[{"$nulls":30},"Os11g0609600",1.2206758,"Os04g0412200",2.7985,{"$nulls":81},"MIR5153","miR5153, osa-miR5153, osa-MIR5153, MIR5153-3p","MICRORNA5153","MICRORNA5153, osa-miRNA5153",5," Tolerance and resistance - Disease resistance,  Other","GO:0006379 - mRNA cleavage, GO:0050832 - defense response to fungus, GO:0035068 - micro-ribonucleoprotein complex, GO:0016442 - RNA-induced silencing complex, GO:0035195 - gene silencing by miRNA","TO:0000074 - blast disease"]
[{"$nulls":30},"Os05g0414100",1.2157553,"Os09g0518900",2.819342,{"$nulls":81},"PME27","OsPME27","PECTIN METHYLESTERASE 27","pectin methylesterase 27",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005618 - cell wall, GO:0004857 - enzyme inhibitor activity, GO:0030599 - pectinesterase activity, GO:0042545 - cell wall modification, GO:0043086 - negative regulation of catalytic activity, GO:0045330 - aspartyl esterase activity",null,null,"Os09g0433700","LOC_Os09g26360.1"]
[{"$nulls":30},"Os08g0442200",1.2139806,"Os03g0370400",2.8285267,{"$nulls":81},"_",null,"_",null,11," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004568 - chitinase activity, GO:0005975 - carbohydrate metabolic process",null,null,"Os11g0702200","LOC_Os11g47610.1"]
[{"$nulls":30},"Os07g0296200",1.2108303,"Os01g0192000",2.8330657,{"$nulls":81},"_","POD2, OsPOD2, PRX13, OSPRX13","_","peroxidase, Peroxidase 71",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0006979 - response to oxidative stress, GO:0042744 - hydrogen peroxide catabolic process, GO:0004601 - peroxidase activity, GO:0005576 - extracellular region, GO:0020037 - heme binding, GO:0050832 - defense response to fungus, GO:0046688 - response to copper ion","TO:0000021 - copper sensitivity, TO:0000074 - blast disease",null,"Os01g0326300","LOC_Os01g22249.1"]
[{"$nulls":30},"Os02g0693200",1.2084183,"Os03g0271500",2.849537,{"$nulls":81},"TID1","OsTID1, TubA2, SRS5, OS-TubA2, OsTubA2, OsSRS5","TWISTED DWARF 1","TWISTED DWARF1, Tubulin alpha-2, Tubulin alpha-2 chain, small and round seed 5",11," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0003924 - GTPase activity, GO:0009635 - response to herbicide, GO:0046688 - response to copper ion, GO:0007017 - microtubule-based process, GO:0005874 - microtubule, GO:0005737 - cytoplasm, GO:0051510 - regulation of unidimensional cell growth, GO:0005525 - GTP binding, GO:0005200 - structural constituent of cytoskeleton, GO:0051258 - protein polymerization","TO:0000021 - copper sensitivity, TO:0000058 - herbicide sensitivity, TO:0000734 - grain length, TO:0000397 - grain size, TO:0000146 - seed length, TO:0000484 - seed shape, TO:0000391 - seed size",null,"Os11g0247300","LOC_Os11g14220.1"]
[{"$nulls":30},"Os03g0823500",1.2046245,"Os04g0623800",2.8655863,{"$nulls":81},"_","LHCB, LHCP II, Lhcb2, OsLhcb2, Lhcb2.1, OsLhcb2.1","_","light-harvesting chlorophyll a/b-binding protein b2.1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0018298 - protein-chromophore linkage, GO:0009266 - response to temperature stimulus, GO:0010287 - plastoglobule, GO:0010218 - response to far red light, GO:0010114 - response to red light, GO:0009941 - chloroplast envelope, GO:0009765 - photosynthesis, light harvesting, GO:0009637 - response to blue light, GO:0009535 - chloroplast thylakoid membrane, GO:0010378 - temperature compensation of the circadian clock, GO:0007623 - circadian rhythm, GO:0016168 - chlorophyll binding, GO:0016021 - integral to membrane, GO:0046872 - metal ion binding, GO:0009523 - photosystem II, GO:0009522 - photosystem I, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress","TO:0000432 - temperature response trait, TO:0006001 - salt tolerance",null,"Os03g0592500","LOC_Os03g39610.2, LOC_Os03g39610.1"]
[{"$nulls":30},"Os01g0629100",1.2025518,"Os12g0571700",2.874834,{"$nulls":81},"PRODH","OsProDH","PROLINE DEHYDROGENASE","Proline dehydrogenase",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006537 - glutamate biosynthetic process, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0006562 - proline catabolic process, GO:0006560 - proline metabolic process, GO:0004657 - proline dehydrogenase activity, GO:0005739 - mitochondrion","TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance","PO:0009005 - root , PO:0025034 - leaf ","Os10g0550900","LOC_Os10g40360.1"]
[{"$nulls":30},"Os07g0114500",1.1986275,"Os06g0233800",2.8919525,{"$nulls":81},"_","OsDGL1","_","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor",7," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity, GO:0005789 - endoplasmic reticulum membrane, GO:0018279 - protein amino acid N-linked glycosylation via asparagine","TO:0002649 - pesticide sensitivity",null,"Os07g0209000","LOC_Os07g10830.1"]
[{"$nulls":30},"Os02g0714100",1.1919159,"Os03g0751400",2.9028213,{"$nulls":81},"PPR676","OsPPR676, OsATP4, ATP4","PENTATRICOPEPTIDE REPEAT PROTEIN 676","pentatricopeptide repeat protein 676",3," Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0009516 - leucoplast, GO:0009509 - chromoplast, GO:0009555 - pollen development, GO:0009657 - plastid organization, GO:0009409 - response to cold, GO:0016556 - mRNA modification, GO:0019252 - starch biosynthetic process, GO:0016051 - carbohydrate biosynthetic process, GO:0016554 - cytidine to uridine editing, GO:0006633 - fatty acid biosynthetic process, GO:0040007 - growth, GO:0005737 - cytoplasm, GO:0005829 - cytosol, GO:0048653 - anther development, GO:0009536 - plastid, GO:0009507 - chloroplast","TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000357 - growth and development trait, TO:0000135 - leaf length, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000371 - yield trait, TO:0000370 - leaf width, TO:0000495 - chlorophyll content, TO:0000316 - photosynthetic ability, TO:0000326 - leaf color, TO:0002714 - plastid development trait, TO:0000053 - pollen sterility","PO:0001007 - pollen development stage , PO:0001004 - anther development stage , PO:0025313 - tapetum ","Os03g0215900","LOC_Os03g11670.1"]
[{"$nulls":30},"Os08g0234400",1.1902375,"Os06g0729000",2.9180725,{"$nulls":81},"ALDH22A1","OsALDH22, ALDH22, OsALDH22A1","ALDEHYDE DEHYDROGENASE 22A1","aldehyde dehydrogenase 22, rice homolog of Arabidopsis ALDH22",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor",null,null,"Os07g0688800","LOC_Os07g48920.1"]
[{"$nulls":30},"Os11g0687200",1.1889133,"Os05g0247100",2.9267607,{"$nulls":81},"_","OsZFP1, SRZ3","_","zinc finger protein 1, stress repressive zinc finger protein 3",6," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding",null,null,"Os06g0141200","LOC_Os06g04920.1, LOC_Os06g04920.2"]
[{"$nulls":30},"Os04g0602400",1.1836747,"Os05g0123300",2.9403718,{"$nulls":81},"_","OsDPK1, DPK1, MKKK32, OsMKKK32, MAPKKK32","_","dual-specificity protein kinase 1",8," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding",null,null,"Os08g0224100","LOC_Os08g12750.1"]
[{"$nulls":30},"Os03g0583900",1.1832548,"Os07g0191600",2.9421368,{"$nulls":81},"_","OsDPK3","_","dual-specificity protein kinase 3",6," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity",null,null,"Os06g0663400","LOC_Os06g45300.1, LOC_Os06g45300.2"]
[{"$nulls":30},"Os03g0135300",1.1796889,"Os04g0375900",2.9517965,{"$nulls":81},"HSP82D","OsHSP82D, hsp82D","HEAT SHOCK PROTEIN 82D","Heat shock protein 82D",null," Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0005524 - ATP binding, GO:0006457 - protein folding"]
[{"$nulls":30},"Os11g0195100",1.1757096,"Os06g0231400",2.9664745,{"$nulls":81},"PGK4","PGK, OsPGK4","PHOSPHOGLYCERATE KINASE 4","phosphoglycerate kinase, \\phosphoglycerate kinase, cytosolic\\\", Phosphoglycerate kinase 4, Phosphoglycerate kinase-4\"",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006096 - glycolysis, GO:0004618 - phosphoglycerate kinase activity, GO:0009408 - response to heat, GO:0005737 - cytoplasm","TO:0000432 - temperature response trait",null,"Os06g0668200","LOC_Os06g45710.1"]
[{"$nulls":30},"Os06g0660700",1.1726488,"Os07g0626800",2.9829104,{"$nulls":81},"_",null,"_","succinate dehydrogenase (flavoprotein subunit)",null," Biochemical character,  Tolerance and resistance - Stress tolerance"]
[{"$nulls":30},"Os04g0675300",1.1701822,"Os02g0698000",2.9928296,{"$nulls":81},"_","RAG2, RA14B, RA14, OsEnS-98","_","rice allergen 14B, endosperm-specific gene 98",7," Seed - Morphological traits,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005615 - extracellular space, GO:0016068 - type I hypersensitivity, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0010431 - seed maturation, GO:0010951 - negative regulation of endopeptidase activity","TO:0000162 - seed quality, TO:0000396 - grain yield, TO:0000397 - grain size, TO:0000590 - grain weight, TO:0000696 - starch content, TO:0000196 - amylose content, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000382 - 1000-seed weight, TO:0000598 - protein content, TO:0000602 - total fat content","PO:0007632 - seed maturation stage ","Os07g0214300","LOC_Os07g11380.1, LOC_Os07g11380.2"]
[{"$nulls":30},"Os09g0431600",1.1684948,"Os03g0178200",3.0002873,{"$nulls":81},"_","aie1b","_","anaerobically inducible early gene 1b",null," Tolerance and resistance - Stress tolerance"]
[{"$nulls":30},"Os07g0533800",1.1622385,"Os07g0634900",3.0182467,{"$nulls":81},"BHLH1","OsbHLH1, bHLH1, OsbHLH062, bHLH062, bHLH62","BASIC HELIX-LOOP-HELIX PROTEIN 1","basic Helix-Loop-Helix protein 1, basic helix-loop-helix protein 062",7," Tolerance and resistance - Stress tolerance,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0009651 - response to salt stress, GO:0030912 - response to deep water","TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0006001 - salt tolerance, TO:0000172 - jasmonic acid sensitivity",null,"Os07g0628500","LOC_Os07g43530.1, LOC_Os07g43530.2"]
[{"$nulls":30},"Os02g0140500",1.1594709,"Os06g0148200",3.028175,{"$nulls":81},"_","prx2","_","class III peroxidase 2",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0046872 - metal ion binding",null,null,"Os01g0205900","LOC_Os01g10850.1"]
[{"$nulls":30},"Os01g0678500",1.157255,"Os07g0664600",3.0534332,{"$nulls":81},"_","prx14","_","class III peroxidase 14",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0004601 - peroxidase activity",null,null,"Os01g0327000","LOC_Os01g22336.1"]
[{"$nulls":30},"Os05g0178900",1.1547533,"Os03g0101250",3.0682476,{"$nulls":81},"_","prx20","_","class III peroxidase 20",1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0046872 - metal ion binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity",null,null,"Os01g0962700","LOC_Os01g73170.1"]
[{"$nulls":30},"Os06g0713800",1.1527869,"Os02g0792000",3.080574,{"$nulls":81},"_","prx25","_","class III peroxidase 25",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0046872 - metal ion binding, GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress",null,null,"Os02g0237000","LOC_Os02g14180.1"]
[{"$nulls":30},"Os06g0648500",1.1522503,"Os03g0121700",3.0898573,{"$nulls":81},"_","prx29","_","class III peroxidase 29",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0006979 - response to oxidative stress",null,null,"Os02g0240300","LOC_Os02g14440.1, LOC_Os02g14440.2"]
[{"$nulls":30},"Os05g0119350",1.1504512,"Os01g0360200",3.1213465,{"$nulls":81},"_","prx37, OsPRX37","_","class III peroxidase 37",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding",null,null,"Os03g0234500","LOC_Os03g13180.1"]
[{"$nulls":30},"Os01g0337160",1.1500149,"Os05g0363500",3.1213806,{"$nulls":81},"_","prx39","_","class III peroxidase 39",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0020037 - heme binding, GO:0046872 - metal ion binding, GO:0006979 - response to oxidative stress",null,null,"Os03g0234900","LOC_Os03g13200.1"]
[{"$nulls":30},"Os02g0794000",1.147881,"Os05g0191500",3.1318233,{"$nulls":81},"_","prx47","_","class III peroxidase 47",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding",{"$nulls":3},"LOC_Os03g25360"]
[{"$nulls":30},"Os03g0720800",1.1475669,"Os01g0882500",3.1369257,{"$nulls":81},"_","prx50","_","class III peroxidase 50",3," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity",null,null,"Os03g0762200"]
[{"$nulls":30},"Os02g0329600",1.1456413,"Os08g0242700",3.1629536,{"$nulls":81},"_","prx57","_","class III peroxidase 57",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0046872 - metal ion binding",null,null,"Os04g0651000","LOC_Os04g55740.1"]
[{"$nulls":30},"Os03g0799600",1.1416001,"Os03g0100800",3.1755283,{"$nulls":81},"_","prx63, OsPRX63","_","class III peroxidase 63",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0046872 - metal ion binding, GO:0004601 - peroxidase activity",null,null,"Os04g0688600","LOC_Os04g59210.1"]
[{"$nulls":30},"Os11g0246900",1.139834,"Os01g0101200",3.193882,{"$nulls":81},"_","prx69","_","class III peroxidase 69",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0046872 - metal ion binding, GO:0020037 - heme binding",null,null,"Os05g0135200","LOC_Os05g04470.1"]
[{"$nulls":30},"Os05g0517200",1.1328201,"Os08g0561700",3.2064326,{"$nulls":81},"PRX77","prx77, OsPRX77","CLASS III PEROXIDASE 77","class III peroxidase 77",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0020037 - heme binding, GO:0046872 - metal ion binding, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os06g0274800","LOC_Os06g16350.1"]
[{"$nulls":30},"Os01g0834800",1.1301478,"Os04g0160600",3.2179477,{"$nulls":81},"_","prx82","_","class III peroxidase 82",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0004601 - peroxidase activity, GO:0006979 - response to oxidative stress, GO:0046872 - metal ion binding",null,null,"Os06g0521900","LOC_Os06g33080.1"]
[{"$nulls":30},"Os10g0492800",1.1283579,"Os09g0423300",3.2283523,{"$nulls":81},"_","prx85","_","class III peroxidase 85",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity, GO:0020037 - heme binding",null,null,"Os06g0521200","LOC_Os06g32960.1"]
[{"$nulls":30},"Os02g0715200",1.1233808,"Os05g0460500",3.238717,{"$nulls":81},"_","prx94","_","class III peroxidase 94",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0004601 - peroxidase activity",{"$nulls":3},"LOC_Os07g01400"]
[{"$nulls":30},"Os06g0328400",1.1225625,"Os12g0548700",3.2440615,{"$nulls":81},"_","prx96","_","class III peroxidase 96",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding",{"$nulls":3},"LOC_Os07g01420"]
[{"$nulls":30},"Os02g0655600",1.1177192,"Os06g0573600",3.277757,{"$nulls":81},"_","prx107","_","class III peroxidase 107",7," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0006979 - response to oxidative stress",null,null,"Os07g0639000","LOC_Os07g44550.1"]
[{"$nulls":30},"Os04g0416100",1.1144319,"Os05g0291700",3.290469,{"$nulls":81},"_","prx117","_","class III peroxidase 117, Putative peroxidase 47, Peroxidase 47",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0046688 - response to copper ion, GO:0050832 - defense response to fungus, GO:0020037 - heme binding, GO:0046872 - metal ion binding, GO:0004601 - peroxidase activity","TO:0000074 - blast disease, TO:0000021 - copper sensitivity",null,"Os08g0113000","LOC_Os08g02110.1"]
[{"$nulls":30},"Os01g0935600",1.1119496,"Os01g0180300",3.2926652,{"$nulls":81},"_","prx119","_","class III peroxidase 119",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity"]
[{"$nulls":30},"Os02g0117100",1.1063315,"Os01g0311300",3.3002117,{"$nulls":81},"_","prx127","_","class III peroxidase 127",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity, GO:0020037 - heme binding, GO:0046872 - metal ion binding",null,null,"Os10g0536600","LOC_Os10g39160.1"]
[{"$nulls":30},"Os07g0545800",1.1034154,"Os01g0144100",3.3075333,{"$nulls":81},"_","prx131","_","class III peroxidase 131",11," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0020037 - heme binding, GO:0006979 - response to oxidative stress, GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding","TO:0000074 - blast disease",null,"Os11g0112200","LOC_Os11g02100.1"]
[{"$nulls":30},"Os09g0308900",1.1010138,"Os09g0286501",3.328488,{"$nulls":81},"SPDS2","OsSPDS2, OsSPMS1, SPMS1","SPERMIDINE SYNTHASE 2","spermidine synthase 2, spermine synthase 1, spermidine/spermine synthase 1",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Panicle, Mode of branching","GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0016740 - transferase activity, GO:0048831 - regulation of shoot development, GO:0009692 - ethylene metabolic process, GO:0048364 - root development, GO:0006596 - polyamine biosynthetic process, GO:0004766 - spermidine synthase activity, GO:0010187 - negative regulation of seed germination, GO:0016049 - cell growth, GO:0009873 - ethylene mediated signaling pathway, GO:0008152 - metabolic process, GO:0009693 - ethylene biosynthetic process, GO:0009651 - response to salt stress","TO:0000449 - grain yield per plant, TO:0006032 - panicle size, TO:0000207 - plant height, TO:0006001 - salt tolerance, TO:0000339 - stem thickness, TO:0000397 - grain size, TO:0000592 - 1000-dehulled grain weight, TO:0000430 - germination rate, TO:0000396 - grain yield, TO:0000734 - grain length","PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009005 - root , PO:0009047 - stem , PO:0020141 - stem node , PO:0000025 - root tip ","Os06g0528600","LOC_Os06g33710.1, LOC_Os06g33710.2, LOC_Os06g33710.3, LOC_Os06g33710.4"]
[{"$nulls":30},"Os02g0799300",1.0953773,"Os01g0760000",3.341468,{"$nulls":81},"NIN6","OsNIN6, INV6, OsINV6","NEUTRAL/ALKALINE INVERTASE 6","neutral/alkaline invertase 6",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0033926 - glycopeptide alpha-N-acetylgalactosaminidase activity, GO:0009409 - response to cold, GO:0008152 - metabolic process, GO:0009651 - response to salt stress","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os11g0175400","LOC_Os11g07440.1, LOC_Os11g07440.2, LOC_Os11g07440.3, LOC_Os11g07440.4"]
[{"$nulls":30},"Os02g0298900",1.0934486,"Os05g0585400",3.3436527,{"$nulls":81},"_","OsACP1, ACP1","_","acid phosphatase 1",1," Tolerance and resistance - Stress tolerance","GO:0016311 - dephosphorylation, GO:0016791 - phosphatase activity, GO:0042594 - response to starvation",null,null,"Os01g0720400","LOC_Os01g52230.1"]
[{"$nulls":30},"Os07g0590700",1.0915804,"Os01g0717400",3.366272,{"$nulls":81},"HDS","OsHDS, OsIspG, IspG","HMBPP SYNTHASE","1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, HMBDP synthase",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005506 - iron ion binding, GO:0009570 - chloroplast stroma, GO:0016114 - terpenoid biosynthetic process, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0009416 - response to light stimulus, GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, GO:0051539 - 4 iron, 4 sulfur cluster binding","TO:0000075 - light sensitivity",null,"Os02g0603800","LOC_Os02g39160.1"]
[{"$nulls":30},"Os05g0569300",1.0875634,"Os10g0539600",3.3820488,{"$nulls":81},"_","OsTLP2, OsTLP2a, OsTLP2b, OsTLP12, OsFbox402, Os_F0479","_","tubby-like protein 2, tubby-like protein 12, F-box protein 402",8," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os08g0103300","LOC_Os08g01290.1, LOC_Os08g01290.2, LOC_Os08g01290.3, LOC_Os08g01290.4, LOC_Os08g01290.5, LOC_Os08g01290.6, LOC_Os08g01290.7"]
[{"$nulls":30},"Os07g0483500",1.0828123,"Os01g0284500",3.4000788,{"$nulls":81},"_","OsTLP10, OsTLP10a, OsTLP10b, OsTLP9, OsFbox267, Os_F0560","_","tubby-like protein 10, tubby-like protein 9, F-box protein 267",5," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os05g0514300","LOC_Os05g43850.1"]
[{"$nulls":30},"Os01g0750900",1.0784049,"Os10g0531900",3.415385,{"$nulls":81},"_",null,"_","50S ribosomal protein",2," Tolerance and resistance - Disease resistance","GO:0006412 - translation, GO:0005840 - ribosome, GO:0003735 - structural constituent of ribosome",null,null,"Os02g0137200","LOC_Os02g04460.1"]
[{"$nulls":30},"Os04g0676000",1.077459,"Os03g0102700",3.442166,{"$nulls":81},"EAS1 ","OsPAO, PAO, OsACD1, ACD1, OsEAS1, RCD2, OsRCD2","EARLY SENESCENCE 1 ","Pheophorbide a oxygenase, accelerated cell-death 1, early senescence 1, rapid cell death 2",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0008219 - cell death, GO:0045730 - respiratory burst, GO:0009507 - chloroplast, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0009416 - response to light stimulus, GO:0009611 - response to wounding, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0015996 - chlorophyll catabolic process, GO:0046872 - metal ion binding, GO:0051537 - 2 iron, 2 sulfur cluster binding","TO:0000346 - tiller number, TO:0000316 - photosynthetic ability, TO:0000605 - hydrogen peroxide content, TO:0000326 - leaf color, TO:0000075 - light sensitivity, TO:0000325 - soluble protein content, TO:0000495 - chlorophyll content, TO:0000455 - seed set percent, TO:0000592 - 1000-dehulled grain weight, TO:0000040 - panicle length, TO:0000249 - leaf senescence, TO:0000447 - filled grain number, TO:0001018 - transpiration rate, TO:0000522 - stomatal conductance, TO:0000145 - internode length, TO:0001027 - net photosynthetic rate, TO:0000207 - plant height","PO:0001054 - 4 leaf senescence stage ","Os03g0146400","LOC_Os03g05310.1"]
[{"$nulls":30},"Os02g0461400",1.0742289,"Os02g0648300",3.4605591,{"$nulls":81},"_",null,"_",null,1," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os01g0953200","LOC_Os01g72390.1"]
[{"$nulls":30},"Os09g0392400",1.0693856,"Os08g0229200",3.4856339,{"$nulls":81},"_",null,"_",null,6," Tolerance and resistance - Stress tolerance","GO:0043531 - ADP binding, GO:0006952 - defense response",null,null,"Os06g0158300","LOC_Os06g06380.1"]
[{"$nulls":30},"Os02g0780700",1.0666405,"Os03g0637800",3.504902,{"$nulls":81},"_",null,"_",null,2," Tolerance and resistance - Stress tolerance","GO:0015996 - chlorophyll catabolic process, GO:0047746 - chlorophyllase activity, GO:0043531 - ADP binding",null,null,"Os02g0286700","LOC_Os02g18510.1"]
[{"$nulls":30},"Os03g0767800",1.0657244,"Os02g0113200",3.5112286,{"$nulls":81},"_",null,"_",null,12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os12g0199100"]
[{"$nulls":30},"Os09g0570400",1.0573139,"Os01g0205300",3.5507185,{"$nulls":81},"_","Os0053, OsGL1-6, GL1-6","_","Glossy1-homologous gene 6",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005506 - iron ion binding, GO:0009414 - response to water deprivation, GO:0005783 - endoplasmic reticulum, GO:0016491 - oxidoreductase activity, GO:0016021 - integral to membrane, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process","TO:0000709 - leaf gloss, TO:0000276 - drought tolerance",null,"Os02g0814200","LOC_Os02g56920.1"]
[{"$nulls":30},"Os04g0592600",1.0538322,"Os12g0550800",3.557256,{"$nulls":81},"_","OsG6PDH5, G6PDH5","_","d-glucose 6-phosphate dehydrogenase 5, glucose-6-phosphate dehydrogenase 4",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide, GO:0050661 - NADP or NADPH binding, GO:0006098 - pentose-phosphate shunt, GO:0004345 - glucose-6-phosphate dehydrogenase activity","TO:0000058 - herbicide sensitivity",null,"Os03g0318500","LOC_Os03g20300.1, LOC_Os03g20300.2, LOC_Os03g20300.3"]
[{"$nulls":30},"Os06g0703500",1.0499412,"Os12g0510900",3.5731878,{"$nulls":81},"OSK1","SKP1, OsSKP1","SKP1-LIKE GENE 1","S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN, Oryza sativa SKP1-like gene 1, rice SKP1-like Protein1",11," Reproductive organ - Pollination, fertilization, fertility - Meiosis,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009615 - response to virus, GO:0019005 - SCF ubiquitin ligase complex, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0000706 - meiotic DNA double-strand break processing","TO:0000148 - viral disease resistance",null,"Os11g0456300","LOC_Os11g26910.1"]
[{"$nulls":30},"Os03g0119800",1.0436416,"Os02g0203000",3.6010208,{"$nulls":81},"OXO4","OsOxO4, OsGLP3-6, GLP3-6","OXALATE OXIDASE 4","oxalate oxidase 4, german-like protein 3-6",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009789 - positive regulation of abscisic acid mediated signaling, GO:0030912 - response to deep water, GO:0046688 - response to copper ion, GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048046 - apoplast, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0048316 - seed development, GO:0050832 - defense response to fungus, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0009738 - abscisic acid mediated signaling, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000303 - cold tolerance, TO:0000653 - seed development trait, TO:0000286 - submergence sensitivity, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000255 - sheath blight disease resistance, TO:0000621 - inflorescence development trait, TO:0006001 - salt tolerance, TO:0000477 - panicle blast disease resistance","PO:0005052 - plant callus , PO:0009049 - inflorescence , PO:0009047 - stem , PO:0007073 - 2 formation of axillary shoot stage , PO:0007014 - booting stage , PO:0025034 - leaf , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009005 - root , PO:0009006 - shoot system ","Os03g0694000","LOC_Os03g48780.1"]
[{"$nulls":30},"Os09g0411650",1.0380474,"Os07g0572400",3.6124256,{"$nulls":81},"_","OsBURP07, OsBURP7","_","BURP domain-containing protein 7",5," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os05g0217700","LOC_Os05g12630.1, LOC_Os05g12630.2"]
[{"$nulls":30},"Os06g0471100",1.0321418,"Os12g0541500",3.6308708,{"$nulls":81},"_","OsBURP14","_","BURP domain-containing protein 14",9," Tolerance and resistance - Stress tolerance",{"$nulls":3},"Os09g0329000","LOC_Os09g16010.1"]
[{"$nulls":30},"Os05g0511400",1.0248489,"Os06g0340301",3.6871426,{"$nulls":81},"TIFY11E","OsJAZ 13, OsJAZ13, JAZ13, OsTIFY11e, OsJAZ13a, OsJAZ13b, OsJAZ13c, OsJAZ13d","TIFY GENE 11E","Jasmonate ZIM-domain protein 13",10," Vegetative organ - Culm,  Reproductive organ - Heading date,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0040008 - regulation of growth, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0031347 - regulation of defense response, GO:0003714 - transcription corepressor activity, GO:0009753 - response to jasmonic acid stimulus, GO:0042594 - response to starvation, GO:0006355 - regulation of transcription, DNA-dependent, GO:0034052 - positive regulation of plant-type hypersensitive response, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0009723 - response to ethylene stimulus, GO:0005737 - cytoplasm, GO:0009611 - response to wounding, GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0009873 - ethylene mediated signaling pathway","TO:0000180 - spikelet fertility, TO:0000040 - panicle length, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0000011 - nitrogen sensitivity, TO:0002736 - flower number, TO:0000576 - stem length, TO:0000172 - jasmonic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance, TO:0000063 - mimic response, TO:0000173 - ethylene sensitivity",null,"Os10g0391400","LOC_Os10g25230.1"]
[{"$nulls":30},"Os01g0748900",1.0238161,"Os04g0566300",3.7182572,{"$nulls":81},"TIFY5","OsJAZ 2, OsJAZ2, JAZ2, OsTIFY5, OsSTA188","TIFY GENE 5","Jasmonate ZIM-domain protein 2",7," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009611 - response to wounding, GO:0005634 - nucleus, GO:0031347 - regulation of defense response",null,"PO:0009066 - anther ","Os07g0153000","LOC_Os07g05830.1"]
[{"$nulls":30},"Os01g0287700",1.0225016,"Os08g0382400",3.748664,{"$nulls":81},"STL1","SRZ4, OsSRZ4, OsSTL1","SALT TOLERANCE LEVEL 1","stress repressive zinc finger protein 4, salt tolerance level 1",4," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0008270 - zinc ion binding","TO:0006001 - salt tolerance",null,"Os04g0110600","LOC_Os04g02000.1, LOC_Os04g02000.2"]
[{"$nulls":30},"Os02g0707900",1.0202408,"Os01g0110800",3.7869542,{"$nulls":81},"_","YR2, YR6, YR9, YR10, YR21, YR23","_",null,11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response",null,null,"Os11g0673600","LOC_Os11g44960.1"]
[{"$nulls":30},"Os11g0585900",1.0153618,"Os03g0831700",3.7937202,{"$nulls":81},"_","YR19","_",null,4," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding"]
[{"$nulls":30},"Os12g0107500",1.0118122,"Os05g0227600",3.817176,{"$nulls":81},"_","PR10","_","pathogenesis-related gene 10",12," Tolerance and resistance - Disease resistance","GO:0009607 - response to biotic stimulus, GO:0006952 - defense response","TO:0000172 - jasmonic acid sensitivity, TO:0000179 - biotic stress trait",null,"Os12g0555300","LOC_Os12g36860.1"]
[{"$nulls":30},"Os11g0171700",1.0114751,"Os07g0189700",3.8183568,{"$nulls":81},"_","OsSDS1","_","salt and drought sensitive gene 1",1," Tolerance and resistance - Stress tolerance",null,"TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os01g0864500","LOC_Os01g64470.1"]
[{"$nulls":30},"Os06g0560000",1.0094557,"Os09g0427125",3.8534222,{"$nulls":81},"_","RS5, OsRS5","_","raffinose synthase, RAFFINOSE SYNTHASE 5",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005975 - carbohydrate metabolic process, GO:0006979 - response to oxidative stress, GO:0009507 - chloroplast, GO:0009737 - response to abscisic acid stimulus, GO:0047274 - galactinol-sucrose galactosyltransferase activity","TO:0002649 - pesticide sensitivity",null,"Os01g0170000","LOC_Os01g07530.1"]
[{"$nulls":30},"Os02g0173700",1.0057888,"Os07g0673550",3.8810241,{"$nulls":81},"_","OsXXT1, SRH2","_","xyloglucan 6-xylosytransferase 1, short root hair2",3," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0005802 - trans-Golgi network, GO:0033843 - xyloglucan 6-xylosyltransferase activity, GO:0016021 - integral to membrane, GO:0035252 - UDP-xylosyltransferase activity, GO:0016758 - transferase activity, transferring hexosyl groups, GO:0009969 - xyloglucan biosynthetic process, GO:0005768 - endosome, GO:0048767 - root hair elongation","TO:0002665 - root hair length, TO:0002649 - pesticide sensitivity",null,"Os03g0300000","LOC_Os03g18820.1, LOC_Os03g18820.2"]
[{"$nulls":30},"Os06g0201300",1.002952,"Os11g0115400",3.8844478,{"$nulls":81},"_",null,"_",null,3," Biochemical character,  Tolerance and resistance - Stress tolerance",null,"TO:0002649 - pesticide sensitivity",null,"Os03g0808900","LOC_Os03g59430.2"]
[{"$nulls":30},"Os08g0223700",0.999338,"Os07g0670300",3.90448,{"$nulls":81},"_",null,"_",null,6," Biochemical character,  Tolerance and resistance - Stress tolerance",null,"TO:0002649 - pesticide sensitivity",null,"Os06g0311000","LOC_Os06g20570.1"]
[{"$nulls":30},"Os03g0116366",0.99736387,"Os07g0577600",3.912947,{"$nulls":81},"_",null,"_",null,7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008152 - metabolic process, GO:0016757 - transferase activity, transferring glycosyl groups","TO:0002649 - pesticide sensitivity",null,"Os07g0657400","LOC_Os07g46380.1"]
[{"$nulls":30},"Os01g0107400",0.9950306,"Os11g0703600",3.938802,{"$nulls":81},"GL1-2","OsGL1-2, WAX2, OsWAX2","GLOSSY1-HOMOLOGOUS GENE 2","Glossy1-homologous gene 2",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0043447 - alkane biosynthetic process, GO:0005506 - iron ion binding, GO:0006633 - fatty acid biosynthetic process, GO:0010025 - wax biosynthetic process, GO:0016021 - integral to membrane, GO:0016491 - oxidoreductase activity, GO:0046184 - aldehyde biosynthetic process","TO:0000276 - drought tolerance, TO:0000709 - leaf gloss",null,"Os02g0178800","LOC_Os02g08230.1, LOC_Os02g08230.2"]
[{"$nulls":30},"Os04g0672900",0.9903229,"Os01g0716200",3.9512074,{"$nulls":81},"_","OsbHLH065, OsbHLH65","_","basic helix-loop-helix protein 065",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009753 - response to jasmonic acid stimulus, GO:0050832 - defense response to fungus, GO:0009628 - response to abiotic stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0002213 - defense response to insect, GO:0009739 - response to gibberellin stimulus","TO:0000173 - ethylene sensitivity, TO:0000424 - brown planthopper resistance, TO:0000172 - jasmonic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000168 - abiotic stress trait, TO:0000074 - blast disease",null,"Os04g0493100","LOC_Os04g41570.1, LOC_Os04g41570.2, LOC_Os04g41570.3"]
[{"$nulls":30},"Os02g0798600",0.9887924,"Os08g0104600",3.9559326,{"$nulls":81},"_","OsbHLH024","_","basic helix-loop-helix protein 024",1," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0009628 - response to abiotic stimulus","TO:0000168 - abiotic stress trait",null,"Os01g0575200","LOC_Os01g39330.1"]
[{"$nulls":30},"Os06g0716100",0.98085946,"Os02g0556700",3.998146,{"$nulls":81},"BHLH60","OsbHLH060, bHLH060, bHLH60, OsPRI1, PRI1, OsbHLH115, bHLH115","BASIC HELIX-LOOP-HELIX PROTEIN 60","basic helix-loop-helix protein 060, POSITIVE REGULATOR OF IRON HOMEOSTASIS1, POSITIVE REGULATOR OF IRON HOMEOSTASIS 1",8," Tolerance and resistance - Stress tolerance,  Other","GO:0005634 - nucleus, GO:0042594 - response to starvation, GO:0055072 - iron ion homeostasis","TO:0000224 - iron sensitivity","PO:0020031 - radicle , PO:0009084 - pericarp , PO:0009009 - plant embryo , PO:0009072 - plant ovary , PO:0009005 - root , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009082 - spikelet floret , PO:0025281 - pollen ","Os08g0138500","LOC_Os08g04390.2"]
[{"$nulls":30},"Os04g0449500",0.97602844,"Os05g0563600",4.015551,{"$nulls":81},"_","OsbHLH110","_","basic helix-loop-helix protein 110",2," Tolerance and resistance - Stress tolerance","GO:0009628 - response to abiotic stimulus","TO:0000168 - abiotic stress trait",null,"Os02g0603600","LOC_Os02g39140.1, LOC_Os02g39140.2"]
[{"$nulls":30},"Os09g0372900",0.9753545,"Os06g0610800",4.0232925,{"$nulls":81},"_","OsbHLH120, bHLH120","_","basic helix-loop-helix protein 120",9," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0010500 - transmitting tissue development, GO:0080126 - ovary septum development, GO:0005634 - nucleus, GO:0048462 - carpel formation, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000227 - root length, TO:0006001 - salt tolerance, TO:0000306 - root thickness",null,"Os09g0455300","LOC_Os09g28210.1"]
[{"$nulls":30},"Os04g0479100",0.9717288,"Os11g0439600",4.0585732,{"$nulls":81},"_","OsDSR5","_","DUF966-stress repressive gene 5",3," Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane",null,null,"Os03g0692400","LOC_Os03g48600.1, LOC_Os03g48600.11, LOC_Os03g48600.12, LOC_Os03g48600.2, LOC_Os03g48600.3, LOC_Os03g48600.5, LOC_Os03g48600.6, LOC_Os03g48600.7, LOC_Os03g48600.8, LOC_Os03g48600.9"]
[{"$nulls":30},"Os10g0535500",0.96301764,"Os06g0478600",4.090776,{"$nulls":81},"CCX1","OsCCX1, OsNCX6, NCX6","CATION/CA2+ EXCHANGER 1","cation/Ca2+ exchanger 1, Na+/Ca2+ Exchanger 6, Sodium/calcium exchanger 6",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0012505 - endomembrane system, GO:0051592 - response to calcium ion, GO:0005384 - manganese ion transmembrane transporter activity, GO:0009411 - response to UV, GO:0030003 - cellular cation homeostasis, GO:0043157 - response to cation stress, GO:0015079 - potassium ion transmembrane transporter activity, GO:0030659 - cytoplasmic vesicle membrane, GO:0016021 - integral to membrane, GO:0015081 - sodium ion transmembrane transporter activity","TO:0000160 - UV light sensitivity",null,"Os03g0180000","LOC_Os03g08230.1"]
[{"$nulls":30},"Os05g0445100",0.96103925,"Os04g0496300",4.0925746,{"$nulls":81},"CCX3","OsCCX3, OsNCX11, NCX11","CATION/CA2+ EXCHANGER 3","cation/Ca2+ exchanger 3, Na+/Ca2+ Exchanger 11, Sodium/calcium exchanger 11",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0051592 - response to calcium ion, GO:0016021 - integral to membrane, GO:0055085 - transmembrane transport, GO:0009651 - response to salt stress","TO:0000160 - UV light sensitivity, TO:0006001 - salt tolerance",null,"Os10g0436900","LOC_Os10g30070.1"]
[{"$nulls":30},"Os12g0134000",0.9589718,"Os07g0685500",4.135945,{"$nulls":81},"CNGC5","OsCNGC5, OsCNGC10","CYCLIC NUCLEOTIDE GATED CHANNEL 5","Cyclic nucleotide gated channel 5, Cyclic nucleotide-gated ion channel 10",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0009628 - response to abiotic stimulus, GO:0009609 - response to symbiotic bacterium, GO:0009737 - response to abscisic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009723 - response to ethylene stimulus, GO:0009409 - response to cold, GO:0005886 - plasma membrane","TO:0000168 - abiotic stress trait, TO:0000303 - cold tolerance, TO:0000315 - bacterial disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000173 - ethylene sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000163 - auxin sensitivity, TO:0000615 - abscisic acid sensitivity",null,"Os02g0789100","LOC_Os02g54760.1"]
[{"$nulls":30},"Os04g0278200",0.9571106,"Os04g0672300",4.144364,{"$nulls":81},"CNGC9","OsCNGC9, OsCNGC16","CYCLIC NUCLEOTIDE GATED CHANNEL 9","Cyclic nucleotide gated channel 9, Cyclic nucleotide-gated ion channel 16",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0042742 - defense response to bacterium, GO:0009408 - response to heat, GO:0019722 - calcium-mediated signaling, GO:0005886 - plasma membrane, GO:0009409 - response to cold, GO:0005216 - ion channel activity, GO:0016021 - integral to membrane, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0034220 - ion transmembrane transport","TO:0000615 - abscisic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000605 - hydrogen peroxide content, TO:0000175 - bacterial blight disease resistance, TO:0000315 - bacterial disease resistance",null,"Os05g0502000","LOC_Os05g42250.1"]
[{"$nulls":30},"Os09g0540000",0.95553416,"Os09g0555100",4.1791673,{"$nulls":81},"CDS1","OsCNGC15, CNGC15, OsCNGC9, CNGC9, OsCDS1","CELL DEATH AND SUSCEPTIBLE TO BLAST 1","Cyclic nucleotide gated channel 15, Cyclic nucleotide-gated ion channel 9",9," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0043067 - regulation of programmed cell death, GO:0005262 - calcium channel activity, GO:0070588 - calcium ion transmembrane transport, GO:0045089 - positive regulation of innate immune response, GO:0002679 - respiratory burst during defense response, GO:0010200 - response to chitin, GO:0002237 - response to molecule of bacterial origin, GO:0034220 - ion transmembrane transport, GO:0005216 - ion channel activity, GO:0016021 - integral to membrane, GO:0019722 - calcium-mediated signaling, GO:0002221 - pattern recognition receptor signaling pathway, GO:0050832 - defense response to fungus, GO:0009723 - response to ethylene stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009733 - response to auxin stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0005886 - plasma membrane","TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000315 - bacterial disease resistance, TO:0000173 - ethylene sensitivity, TO:0000163 - auxin sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000063 - mimic response, TO:0000167 - cytokinin sensitivity, TO:0000303 - cold tolerance","PO:0005645 - leaf mesophyll , PO:0025034 - leaf ","Os09g0558300","LOC_Os09g38580.5, LOC_Os09g38580.4, LOC_Os09g38580.3, LOC_Os09g38580.1"]
[{"$nulls":30},"Os03g0160900",-0.9504306,"Os10g0450000",4.2582054,{"$nulls":81},"_","OsGLR3.7, GLR3.7","_","Glutamate receptor homolog 3.7, Glutamate receptor 3.4",7," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005215 - transporter activity, GO:0004965 - GABA-B receptor activity, GO:0050832 - defense response to fungus, GO:0016021 - integral to membrane","TO:0000074 - blast disease",null,"Os07g0522600","LOC_Os07g33790.1"]
[{"$nulls":30},"Os04g0691700",-0.95073175,"Os04g0659100",4.2717166,{"$nulls":81},"PM1","AWPM-19, PM19, OsPM1, OsPM-1, OsPM19L1, PM19L1, OsAWPM-19, OsPM19","PLASMA MEMBRANE PROTEIN 1","plasma membrane protein 1, AWPM-19-like protein 1",5," Reproductive organ - Inflorescence,  Tolerance and resistance - Stress tolerance","GO:0010029 - regulation of seed germination, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0012505 - endomembrane system, GO:0010229 - inflorescence development, GO:0005886 - plasma membrane, GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0009738 - abscisic acid mediated signaling, GO:0009414 - response to water deprivation","TO:0000259 - heat tolerance, TO:0000621 - inflorescence development trait, TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002667 - abscisic acid content, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance","PO:0009009 - plant embryo , PO:0001083 - inflorescence development stage , PO:0020104 - leaf sheath , PO:0007057 - 0 seed germination stage , PO:0009015 - portion of vascular tissue , PO:0000293 - guard cell ","Os05g0381400","LOC_Os05g31670.1"]
[{"$nulls":30},"Os04g0415200",-0.9516401,"Os11g0457000",4.2879043,{"$nulls":81},"_","OsTFIIS-like gene, OsMed26_3, Med26_3","_","Transcription Elongation Factor II-S-like gene, Mediator 26_3",12," Tolerance and resistance - Stress tolerance,  Other","GO:0006351 - transcription, DNA-dependent, GO:0005634 - nucleus, GO:0003746 - translation elongation factor activity, GO:0003677 - DNA binding, GO:0005829 - cytosol","TO:0000161 - radiation response trait, TO:0006001 - salt tolerance",null,"Os12g0165700","LOC_Os12g06850.1, LOC_Os12g06850.2, LOC_Os12g06850.3, LOC_Os12g06850.4"]
[{"$nulls":30},"Os07g0624700",-0.9523094,"Os07g0150901",4.3301635,{"$nulls":81},"MOC2","FR, OsFR, FBP1, OsFBP1, OsMOC2, OscFBP1, cFBP1, MOC2/FBP1","MONOCULM 2","cytosolic fructose 1, 6-bisphosphatase, cytosolic FruP2ase, monoculm 2, monoculm2, cytosolic fructose-1, 6-bisphosphatase 1",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009750 - response to fructose stimulus, GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity, GO:0030388 - fructose 1,6-bisphosphate metabolic process, GO:0005986 - sucrose biosynthetic process, GO:0005634 - nucleus, GO:0015979 - photosynthesis, GO:0005829 - cytosol, GO:0005983 - starch catabolic process, GO:0009737 - response to abscisic acid stimulus, GO:0046872 - metal ion binding","TO:0000329 - tillering ability, TO:0000515 - relative growth rate, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000326 - leaf color",null,"Os01g0866400","LOC_Os01g64660.1, LOC_Os01g64660.2, LOC_Os01g64660.3, LOC_Os01g64660.4"]
[{"$nulls":30},"Os05g0537700",-0.9538104,"Os07g0414000",4.363775,{"$nulls":81},"VIP2","IPI1, RIP1, OsVIP2, OsIPI1, OsRIP1","_","Putative VIP2 protein, IPA1 INTERACTING PROTEIN1, IPA1 INTERACTING PROTEIN 1, ROD1 interacting protein 1",1," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0005634 - nucleus, GO:0000209 - protein polyubiquitination, GO:0008270 - zinc ion binding, GO:0004842 - ubiquitin-protein ligase activity, GO:0050832 - defense response to fungus","TO:0006032 - panicle size, TO:0000255 - sheath blight disease resistance, TO:0000346 - tiller number, TO:0000074 - blast disease, TO:0000437 - male sterility, TO:0000371 - yield trait, TO:0000017 - anatomy and morphology related trait","PO:0025034 - leaf ","Os01g0350900 ","LOC_Os01g24880.1, LOC_Os01g24880.2"]
[{"$nulls":30},"Os12g0612400",-0.9571989,"Os08g0130400",4.418789,{"$nulls":81},"_",null,"_","Sm gene, Sm family protein",4," Tolerance and resistance - Stress tolerance","GO:0000932 - cytoplasmic mRNA processing body, GO:0016070 - RNA metabolic process","TO:0000276 - drought tolerance",null,"Os04g0445800","LOC_Os04g36810.1"]
[{"$nulls":30},"Os08g0156800",-0.95774585,"Os03g0592500",4.4201694,{"$nulls":81},"_",null,"_","Sm gene, Sm family protein",5," Tolerance and resistance - Insect resistance",null,"TO:0000261 - insect damage resistance",null,"Os05g0594900","LOC_Os05g51650.1"]
[{"$nulls":30},"Os06g0367900",-0.95999783,"Os02g0257300",4.477321,{"$nulls":81},"_","OsPAL05, PAL05, OsPAL3, PAL5, PAL3, OsPAL2;3, PAL2;3, OsPAL2-1, PAL2-1","_","Phenylalanine ammonia-lyase 05",2," Biochemical character,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0005829 - cytosol, GO:0045548 - phenylalanine ammonia-lyase activity, GO:0006559 - L-phenylalanine catabolic process, GO:0046394 - carboxylic acid biosynthetic process, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0010229 - inflorescence development, GO:0009697 - salicylic acid biosynthetic process, GO:0009800 - cinnamic acid biosynthetic process, GO:0006979 - response to oxidative stress","TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000605 - hydrogen peroxide content","PO:0001083 - inflorescence development stage ","Os02g0626600","LOC_Os02g41670.1"]
[{"$nulls":30},"Os07g0657200",-0.9607954,"Os05g0587600",4.4819374,{"$nulls":81},"_","OsPAL07, OsPAL, PAL07, OsPAL6, PAL6, PAL1, OsPAL7, PAL7","_","Phenylalanine ammonia-lyase 07",4," Biochemical character,  Vegetative organ - Leaf,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility,  Coloration - Anthocyanin,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0006559 - L-phenylalanine catabolic process, GO:0046688 - response to copper ion, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0006952 - defense response, GO:0009800 - cinnamic acid biosynthetic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009620 - response to fungus, GO:0009809 - lignin biosynthetic process, GO:0002213 - defense response to insect, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0009697 - salicylic acid biosynthetic process, GO:0010229 - inflorescence development, GO:0045548 - phenylalanine ammonia-lyase activity","TO:0000621 - inflorescence development trait, TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000421 - pollen fertility, TO:0000021 - copper sensitivity, TO:0000424 - brown planthopper resistance, TO:0000207 - plant height, TO:0000326 - leaf color","PO:0020104 - leaf sheath , PO:0009047 - stem , PO:0001083 - inflorescence development stage ","Os04g0518400","LOC_Os04g43800.1"]
[{"$nulls":30},"Os01g0648500",-0.96216375,"Os08g0445000",4.540898,{"$nulls":81},"_","GER7, OsGLP3-7, GLP3-7","_","germin-like protein 7, german-like protein 3-7",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030145 - manganese ion binding, GO:0045735 - nutrient reservoir activity, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0048046 - apoplast","TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0001170 - seed development stage , PO:0001083 - inflorescence development stage ","Os03g0804500","LOC_Os03g58980.1"]
[{"$nulls":30},"Os06g0209300",-0.96512574,"Os02g0594700",4.573135,{"$nulls":81},"_","OsTCTP, TCTP, OsTCTPa, OsTCTPb, TPH","_","21 kDa polypeptide, translationally controlled tumor protein, TCTP homolog, Tumor protein homolog",11," Tolerance and resistance - Stress tolerance","GO:0008283 - cell proliferation, GO:0046686 - response to cadmium ion, GO:0040014 - regulation of multicellular organism growth, GO:0007346 - regulation of mitotic cell cycle, GO:0001558 - regulation of cell growth, GO:0031117 - positive regulation of microtubule depolymerization, GO:0009860 - pollen tube growth, GO:0010252 - auxin homeostasis, GO:0042742 - defense response to bacterium, GO:0009819 - drought recovery, GO:0009790 - embryonic development, GO:0048527 - lateral root development, GO:0010728 - regulation of hydrogen peroxide biosynthetic process, GO:0033194 - response to hydroperoxide, GO:0009737 - response to abscisic acid stimulus, GO:0046689 - response to mercury ion, GO:0005774 - vacuolar membrane, GO:0009579 - thylakoid, GO:0009506 - plasmodesma, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0009507 - chloroplast, GO:0048046 - apoplast, GO:0005794 - Golgi apparatus, GO:0048768 - root hair cell tip growth","TO:0000605 - hydrogen peroxide content, TO:0000482 - chemical stress sensitivity, TO:0000615 - abscisic acid sensitivity",null,"Os11g0660500","LOC_Os11g43900.2, LOC_Os11g43900.1"]
[{"$nulls":30},"Os04g0650000",-0.96720123,"Os01g0652800",4.6436768,{"$nulls":81},"_","HEMA1, HEMA, OsHEMA, GluTR, OsHEMA1","_","glutamyl-tRNA reductase, Glutamyl-tRNA reductase 2",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015995 - chlorophyll biosynthetic process, GO:0009637 - response to blue light, GO:0009507 - chloroplast, GO:0006782 - protoporphyrinogen IX biosynthetic process, GO:0046686 - response to cadmium ion, GO:0006979 - response to oxidative stress, GO:0010114 - response to red light, GO:0008883 - glutamyl-tRNA reductase activity, GO:0050661 - NADP or NADPH binding","TO:0000159 - blue light sensitivity, TO:0000158 - red light sensitivity",null,"Os10g0502400","LOC_Os10g35840.1"]
[{"$nulls":30},"Os06g0256200",-0.96741456,"Os01g0914400",4.6522336,{"$nulls":81},"TBP2","TBPOs-2, OsTBP2, OsRpt2a, Rpt2a, OsRPT2a","TAT BINDING PROTEIN-2","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a",7," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0051788 - response to misfolded protein, GO:0005634 - nucleus, GO:0048232 - male gamete generation, GO:0010078 - maintenance of root meristem identity, GO:0035266 - meristem growth, GO:0007292 - female gamete generation, GO:0009933 - meristem structural organization, GO:0048829 - root cap development, GO:0031347 - regulation of defense response, GO:0005829 - cytosol, GO:0000502 - proteasome complex, GO:0005524 - ATP binding, GO:0009965 - leaf morphogenesis, GO:0010311 - lateral root formation, GO:0043248 - proteasome assembly, GO:0005886 - plasma membrane, GO:0046686 - response to cadmium ion, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0017111 - nucleoside-triphosphatase activity, GO:0009408 - response to heat","TO:0000112 - disease resistance",null,"Os07g0691800","LOC_Os07g49150.1"]
[{"$nulls":30},"Os02g0757900",-0.9682903,"Os08g0375400",4.7085958,{"$nulls":81},"HMGRIII","HMGR III, OsHMGRIII, Hmg3, HMGR3, HMGR 3, OsHMGR3, HMGR2, OsHMGR2, OsOMT","3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE III","3-hydroxy-3-methylglutaryl coenzyme A reductase III, 3-hydroxy-3-methylglutaryl-CoA reductase 3",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0015936 - coenzyme A metabolic process, GO:0016021 - integral to membrane, GO:0016126 - sterol biosynthetic process, GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway, GO:0042282 - hydroxymethylglutaryl-CoA reductase activity, GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity, GO:0050661 - NADP or NADPH binding, GO:0005789 - endoplasmic reticulum membrane, GO:0016104 - triterpenoid biosynthetic process","TO:0000432 - temperature response trait, TO:0000075 - light sensitivity",null,"Os08g0512700","LOC_Os08g40180.1"]
[{"$nulls":30},"Os03g0850600",-0.9693613,"Os03g0244000",4.763195,{"$nulls":81},"IREN",null,"IMMUNE RELATED ENDONUCLEASE","immune related endonuclease",10," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010043 - response to zinc ion, GO:0009409 - response to cold, GO:0009626 - plant-type hypersensitive response, GO:0004519 - endonuclease activity, GO:0004527 - exonuclease activity, GO:0005509 - calcium ion binding, GO:0005634 - nucleus, GO:0006308 - DNA catabolic process, GO:0009268 - response to pH","TO:0000112 - disease resistance",null,"Os10g0203000","LOC_Os10g13550.1, LOC_Os10g13550.2, LOC_Os10g13550.3"]
[{"$nulls":30},"Os01g0236800",-0.97098285,"Os03g0788600",4.788579,{"$nulls":81},"NAC106","ONAC106","NAC DOMAIN-CONTAINING PROTEIN 106","NAC domain-containing protein 106",8," Vegetative organ - Leaf,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009651 - response to salt stress, GO:0010150 - leaf senescence","TO:0000567 - tiller angle, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage ","Os08g0433500","LOC_Os08g33670.1"]
[{"$nulls":30},"Os10g0510700",-0.9718995,"Os03g0118200",4.9018173,{"$nulls":81},"NAC139","ONAC139, OsNAM","NAC DOMAIN-CONTAINING PROTEIN 139","NAC domain-containing protein 139, no apical meristem",12," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0003677 - DNA binding, GO:0010150 - leaf senescence, GO:0010089 - xylem development, GO:0045892 - negative regulation of transcription, DNA-dependent","TO:0000180 - spikelet fertility, TO:0000276 - drought tolerance, TO:0000625 - spikelet density, TO:0000557 - secondary branch number, TO:0000447 - filled grain number, TO:0006001 - salt tolerance",null,"Os12g0477400","LOC_Os12g29330.1"]
[{"$nulls":30},"Os12g0141500",-0.973207,"Os11g0275500",5.0073223,{"$nulls":81},"_","rNBS41","_","NBS-LRR protein rNBS41",2," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response",null,null,"Os02g0262800","LOC_Os02g16270.1, LOC_Os02g16270.2"]
[{"$nulls":30},"Os07g0636100",-0.9744868,"Os06g0304600",5.0855823000000004,{"$nulls":81},"RPS7","rps7","RIBOSOMAL PROTEIN S7","ribosomal protein S7, chloroplast 30S ribosomal protein S7",null," Tolerance and resistance - Stress tolerance,  Other",null,"TO:0000432 - temperature response trait"]
[{"$nulls":30},"Os02g0152600",-0.9770608,"Os10g0111700",5.1882243,{"$nulls":81},"HMGB710","OsHMGB710","HIGH MOBILITY GROUP PROTEIN B710","HMG protein, high-mobility group protein, nucleasome/chromatin assembly factor D protein of HMG protein family, nucleasome/chromatin assembly factor D",9," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0009566 - fertilization","TO:0000432 - temperature response trait",null,"Os09g0551600","LOC_Os09g37910.1"]
[{"$nulls":30},"Os03g0586600",-0.97775286,"Os03g0118600",5.2110105,{"$nulls":81},"_",null,"_","cysteine proteinase 1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0042742 - defense response to bacterium, GO:0008234 - cysteine-type peptidase activity, GO:0005773 - vacuole, GO:0006970 - response to osmotic stress","TO:0000432 - temperature response trait",null,"Os02g0469600","LOC_Os02g27030.1"]
[{"$nulls":30},"Os06g0215200",-0.97860926,"Os04g0535200",5.323376,{"$nulls":81},"_",null,"_","ATP synthase C chain",null," Biochemical character,  Tolerance and resistance - Stress tolerance",null,"TO:0000432 - temperature response trait"]
[{"$nulls":30},"Os02g0179300",-0.9791481,"Os10g0529300",5.40127,{"$nulls":81},"ACBP1","OsACBP1","ACYL-COA-BINDING PROTEIN 1","Acyl-CoA-binding protein, Acyl-CoA-binding protein 1",8," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0008289 - lipid binding, GO:0005829 - cytosol, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0000062 - acyl-CoA binding","TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000432 - temperature response trait","PO:0025034 - leaf ","Os08g0162800","LOC_Os08g06550.1"]
[{"$nulls":30},"Os10g0485100",-0.9810211,"Os06g0179000",5.533913,{"$nulls":81},"ALDH11A3","OsALDH11A3, GAPN","ALDEHYDE DEHYDROGENASE 11A3","NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, Aldehyde dehydrogenase 11A3",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, GO:0005737 - cytoplasm","TO:0000432 - temperature response trait",null,"Os08g0440800","LOC_Os08g34210.1, LOC_Os08g34210.2"]
[{"$nulls":30},"Os05g0545900",-0.9819301,"Os07g0157600",5.6324897,{"$nulls":81},"_","WZF1, OsWZF1, DLN99, OsDLN99, OsZFP1, ZFP1","_","finger protein WZF1, DLN repressor 99, DLN motif protein 99, Zinc finger protein 1",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus, GO:0046872 - metal ion binding, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000432 - temperature response trait, TO:0000172 - jasmonic acid sensitivity, TO:0000074 - blast disease",null,"Os03g0764100","LOC_Os03g55540.1"]
[{"$nulls":30},"Os09g0440700",-0.9831006,"Os08g0189200",5.8566914,{"$nulls":81},"_",null,"_","Arabidopsis thaliana ERD15 protein homolog",3," Tolerance and resistance - Stress tolerance",null,"TO:0000432 - temperature response trait",null,"Os03g0353400","LOC_Os03g23010.1, LOC_Os03g23010.2, LOC_Os03g23010.3, LOC_Os03g23010.4, LOC_Os03g23010.5"]
[{"$nulls":30},"Os01g0225100",-0.9856189,"Os05g0550300",6.0061736,{"$nulls":81},"_","Nbs1-Pi9, Nbs1-Pi2, Nbs1-NPB","_",null,6," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding, GO:0006952 - defense response","TO:0000074 - blast disease",null,"Os06g0286500","LOC_Os06g17880.1"]
[{"$nulls":30},"Os03g0783700",-0.9875123,"Os04g0459500",6.2933326,{"$nulls":81},"_","R2R3-MYB, OsMYB55/61-L, MYB55/61-L, OsMYB55, OsMYB61-L, MYB55, MYB61-L, OsMYB61L, MYB61L, OsMYB61b, MYB61b","_","MYB transcription factor 55/61L",5," Tolerance and resistance - Stress tolerance,  Other","GO:0030912 - response to deep water, GO:0003677 - DNA binding, GO:0003682 - chromatin binding","TO:0000524 - submergence tolerance",null,"Os05g0140100","LOC_Os05g04820.1"]
[{"$nulls":30},"Os08g0154700",-0.98790294,"Os10g0317900",6.3679175,{"$nulls":81},"SAP16","OsSAP16","STRESS ASSOCIATED PROTEIN GENE 16","C2H2 transcription factor, stress associated protein 16, stress-associated protein 16",7," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0010118 - stomatal movement, GO:0006950 - response to stress, GO:0009651 - response to salt stress, GO:0008270 - zinc ion binding, GO:0009845 - seed germination, GO:0009751 - response to salicylic acid stimulus, GO:0009409 - response to cold, GO:0010109 - regulation of photosynthesis, GO:0009414 - response to water deprivation, GO:0009611 - response to wounding","TO:0000043 - root anatomy and morphology trait, TO:0000430 - germination rate, TO:0000276 - drought tolerance, TO:0000164 - stress trait, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000352 - plant dry weight, TO:0000207 - plant height, TO:0000522 - stomatal conductance, TO:0001027 - net photosynthetic rate, TO:0000303 - cold tolerance",null,"Os07g0569700","LOC_Os07g38240.1"]
[{"$nulls":30},"Os02g0817200",-0.98877,"Os02g0148000",6.6167235,{"$nulls":81},"PUB3","OsPUB3, OsPUB03","PLANT U-BOX-CONTAINING PROTEIN 3","arm repeat cell adhesion protein, arm repeat protein, plant U-box-containing protein 3, U-box protein 3",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0004842 - ubiquitin-protein ligase activity, GO:0000151 - ubiquitin ligase complex, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0006001 - salt tolerance, TO:0000495 - chlorophyll content, TO:0000303 - cold tolerance",null,"Os01g0823900","LOC_Os01g60860.1"]
[{"$nulls":30},"Os09g0569200",-0.98987645,"Os04g0337500",6.735754,{"$nulls":81},"_","PAL03, OsPAL8, PAL8","_","Phenylalanine ammonia-lyase",11," Biochemical character,  Tolerance and resistance - Insect resistance","GO:0046244 - salicylic acid catabolic process, GO:0005737 - cytoplasm, GO:0009555 - pollen development, GO:0006559 - L-phenylalanine catabolic process, GO:0006979 - response to oxidative stress, GO:0046274 - lignin catabolic process, GO:0002213 - defense response to insect, GO:0009809 - lignin biosynthetic process, GO:0009800 - cinnamic acid biosynthetic process, GO:0010224 - response to UV-B, GO:0009819 - drought recovery, GO:0080142 - regulation of salicylic acid biosynthetic process, GO:0045548 - phenylalanine ammonia-lyase activity","TO:0000424 - brown planthopper resistance, TO:0000074 - blast disease","PO:0009047 - stem , PO:0020104 - leaf sheath ","Os11g0708900","LOC_Os11g48110.1"]
[{"$nulls":30},"Os02g0803700",-0.9903167,"Os12g0291400",7.0811596,{"$nulls":81},"LAC11","Lac, OsLAC11, LAC10, OsLAC10","LACCASE 11","lactase, laccase 11, laccase-10",3," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0050832 - defense response to fungus, GO:0005507 - copper ion binding, GO:0006952 - defense response, GO:0009414 - response to water deprivation, GO:0009809 - lignin biosynthetic process, GO:0046274 - lignin catabolic process, GO:0048046 - apoplast, GO:0010038 - response to metal ion","TO:0000048 - kernel smut disease resistance, TO:0000179 - biotic stress trait, TO:0000034 - chromium sensitivity",null,"Os03g0273200","LOC_Os03g16610.1"]
[{"$nulls":30},"Os02g0628800",-0.99230146,"Os01g0106300",7.7359977,{"$nulls":81},"_","MDH","_","malate dehydrogenase",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005739 - mitochondrion, GO:0009408 - response to heat, GO:0044262 - cellular carbohydrate metabolic process, GO:0048046 - apoplast, GO:0005774 - vacuolar membrane, GO:0006099 - tricarboxylic acid cycle, GO:0006108 - malate metabolic process, GO:0009409 - response to cold, GO:0009941 - chloroplast envelope, GO:0010319 - stromule, GO:0030060 - L-malate dehydrogenase activity, GO:0009753 - response to jasmonic acid stimulus","TO:0000172 - jasmonic acid sensitivity, TO:0000432 - temperature response trait",null,"Os08g0434300","LOC_Os08g33720.1"]
[{"$nulls":30},"Os04g0346100",-0.9936447,"Os08g0460000",7.935741,{"$nulls":81},"_","DHQDT/SDH, OsDHQDT/SDH, OsDHQDT, OsSDH, DHQDT, SDH, DHQ/SDH-1","_","3-dehydroquinate dehydratase/shikimate dehydrogenase",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003855 - 3-dehydroquinate dehydratase activity, GO:0009411 - response to UV, GO:0004764 - shikimate 5-dehydrogenase activity","TO:0000160 - UV light sensitivity",null,"Os01g0375200","LOC_Os01g27750.1"]
[{"$nulls":30},"Os05g0533700",-0.994445,"Os01g0720500",8.342963,{"$nulls":81},"_","CM, OsCM","_","chorismate mutase",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0042742 - defense response to bacterium, GO:0000162 - tryptophan biosynthetic process, GO:0004106 - chorismate mutase activity, GO:0046417 - chorismate metabolic process","TO:0000160 - UV light sensitivity",null,"Os01g0764400","LOC_Os01g55870.1"]
[{"$nulls":30},"Os02g0461900",-0.99484223,"Os01g0878900",9.539226,{"$nulls":81},"_","TS","_","tryptophan synthase",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030170 - pyridoxal phosphate binding, GO:0000162 - tryptophan biosynthetic process, GO:0004834 - tryptophan synthase activity, GO:0009411 - response to UV","TO:0000160 - UV light sensitivity, TO:0002673 - amino acid content",null,"Os06g0632200","LOC_Os06g42560.4, LOC_Os06g42560.3, LOC_Os06g42560.2, LOC_Os06g42560.1"]
[{"$nulls":30},"Os03g0271200",-0.9968392,{"$nulls":83},"_","DHFR","_","dihydroflavonol 4-reductase",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0044237 - cellular metabolic process, GO:0003824 - catalytic activity, GO:0050662 - coenzyme binding, GO:0009411 - response to UV","TO:0000160 - UV light sensitivity",null,"Os07g0601100","LOC_Os07g40986.1, LOC_Os07g40986.2"]
[{"$nulls":30},"Os08g0561800",-0.998267,{"$nulls":83},"MRLK48","OsMRLK48","MALECTIN/MALECTIN-LIKE RECEPTOR-LIKE KINASE 48","SHR5-receptor-like kinase",8," Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009411 - response to UV","TO:0000160 - UV light sensitivity",null,"Os08g0203700","LOC_Os08g10330.1"]
[{"$nulls":30},"Os07g0578800",-0.999499,{"$nulls":83},"_",null,"_","ranbp1 domain containing protein",3," Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0046907 - intracellular transport","TO:0000160 - UV light sensitivity",null,"Os03g0292800","LOC_Os03g18180.1"]
[{"$nulls":30},"Os05g0468500",-1.0017394,{"$nulls":83},"FBOX72","OsFbox072, OsFbox72, Fbox72, Os_F0508, OsEBF2, EBF2","F-BOX PROTEIN 72","F-box protein 72, EIN3-BINDING F-BOX PROTEIN 2",2," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os02g0200900","LOC_Os02g10700.1"]
[{"$nulls":30},"Os09g0572200",-1.0027221,{"$nulls":83},"DUF668-12","OsDUF668-12","DUF668 FAMILY MEMBER 12","DUF668 family member 12",12," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0050832 - defense response to fungus, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0030912 - response to deep water, GO:0009409 - response to cold","TO:0000276 - drought tolerance, TO:0000074 - blast disease, TO:0000524 - submergence tolerance, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance","PO:0000003 - whole plant ","Os12g0146500","LOC_Os12g05180.1"]
[{"$nulls":30},"Os01g0179800",-1.0037484,{"$nulls":83},"CFM3","OsCFM3","_",null,11," Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0005739 - mitochondrion, GO:0003723 - RNA binding, GO:0000373 - Group II intron splicing, GO:0006397 - mRNA processing, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0009047 - stem , PO:0009051 - spikelet ","Os11g0592400","LOC_Os11g37990.1"]
[{"$nulls":30},"Os03g0213400",-1.0055245,{"$nulls":83},"_",null,"_",null,4," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0003723 - RNA binding","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance","PO:0009051 - spikelet , PO:0025034 - leaf ","Os04g0492900","LOC_Os04g41550.1"]
[{"$nulls":30},"Os07g0130100",-1.0069436,{"$nulls":83},"_",null,"AAA-ATPASE 4","OsAAA-ATPase4, AAA-ATPase4",2," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005739 - mitochondrion, GO:0007005 - mitochondrion organization, GO:0008270 - zinc ion binding, GO:0005524 - ATP binding, GO:0009735 - response to cytokinin stimulus","TO:0000167 - cytokinin sensitivity, TO:0000074 - blast disease",null,"Os02g0697600","LOC_Os02g46990.1"]
[{"$nulls":30},"Os01g0962400",-1.0081196,{"$nulls":83},"PXLG4","OsPXLG4","PUTATIVE EXTRA-LARGE G PROTEIN 4","putative extra-large G protein 4",10," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance","GO:0001664 - G-protein-coupled receptor binding, GO:0007188 - G-protein signaling, coupled to cAMP nucleotide second messenger, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0048573 - photoperiodism, flowering, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005834 - heterotrimeric G-protein complex, GO:0031683 - G-protein beta/gamma-subunit binding, GO:0005525 - GTP binding, GO:0019001 - guanyl nucleotide binding, GO:0009409 - response to cold, GO:0003924 - GTPase activity","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000137 - days to heading, TO:0000303 - cold tolerance",null,"Os10g0117800","LOC_Os10g02814.2, LOC_Os10g02814.1"]
[{"$nulls":30},"Os01g0276100",-1.0096482,{"$nulls":83},"EULD1B","OsEULD1b, EULD1b, Osr40c1, r40c1","EUL-RELATED LECTIN D1B","EUL-related lectin D1b, R40 family of lectin protein C1, OsR40 protein C1",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0002229 - defense response to oomycetes, GO:0009737 - response to abscisic acid stimulus, GO:0002213 - defense response to insect, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0030246 - carbohydrate binding, GO:0005737 - cytoplasm, GO:0009753 - response to jasmonic acid stimulus, GO:0005634 - nucleus, GO:0009414 - response to water deprivation","TO:0000175 - bacterial blight disease resistance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000424 - brown planthopper resistance","PO:0000025 - root tip , PO:0009005 - root , PO:0009089 - endosperm , PO:0020121 - lateral root , PO:0009009 - plant embryo ","Os03g0327600","LOC_Os03g21040.3, LOC_Os03g21040.2"]
[{"$nulls":30},"Os06g0555500",-1.0112284,{"$nulls":83},"HPP4","OsHMP15, HMP15, OsHPP4, OsaHPP04, HPP04","HEAVY-METAL-ASSOCIATED PLANT PROTEIN 4","Heavy metal-associated protein 15, heavy-metal-associated plant protein 4",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0030001 - metal ion transport, GO:0050832 - defense response to fungus, GO:0009507 - chloroplast, GO:0046872 - metal ion binding","TO:0000074 - blast disease",null,"Os02g0584800","LOC_Os02g37300.1"]
[{"$nulls":30},"Os11g0226400",-1.0115975,{"$nulls":83},"HIPP41","OsHMP19, HMP19, OsHIPP41, OsaHIP41, HIP41","HEAVY-METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 41","Heavy metal-associated protein 19, heavy-metal-associated isoprenylated plant protein 41",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0009507 - chloroplast, GO:0046872 - metal ion binding, GO:0030001 - metal ion transport, GO:0009409 - response to cold, GO:0005829 - cytosol","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance","PO:0005052 - plant callus ","Os03g0156600","LOC_Os03g06080.1"]
[{"$nulls":30},"Os08g0412100",-1.0133198,{"$nulls":83},"HIPP35","OsHMP43, HMP43, OsHIPP35, OsaHIP35, HIP35","HEAVY-METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 35","Heavy metal-associated protein 43, heavy-metal-associated isoprenylated plant protein 35",10," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0010288 - response to lead ion, GO:0010043 - response to zinc ion, GO:0046686 - response to cadmium ion, GO:0046688 - response to copper ion","TO:0000351 - zinc sensitivity, TO:0000021 - copper sensitivity",null,"Os10g0440500","LOC_Os10g30450.1"]
[{"$nulls":30},"Os06g0149400",-1.0147591,{"$nulls":83},"_",null,"_",null,8," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0046854 - phosphoinositide phosphorylation, GO:0010008 - endosome membrane, GO:0042742 - defense response to bacterium, GO:0016307 - phosphatidylinositol phosphate kinase activity, GO:0000285 - 1-phosphatidylinositol-3-phosphate 5-kinase activity","TO:0000175 - bacterial blight disease resistance",null,"Os08g0450700/Os08g0450800","LOC_Os08g34950.1"]
[{"$nulls":30},"Os01g0276800",-1.0185047,{"$nulls":83},"_","HSP20","_","HSP member",6," Tolerance and resistance - Stress tolerance","GO:0046686 - response to cadmium ion, GO:0043621 - protein self-association, GO:0005777 - peroxisome, GO:0009651 - response to salt stress, GO:0051082 - unfolded protein binding, GO:0000302 - response to reactive oxygen species, GO:0042542 - response to hydrogen peroxide, GO:0051259 - protein oligomerization, GO:0009408 - response to heat, GO:0006457 - protein folding",null,null,"Os06g0253100","LOC_Os06g14240.1"]
[{"$nulls":30},"Os06g0355150",-1.0203533,{"$nulls":83},"_",null,"_",null,11," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat","TO:0000259 - heat tolerance",null,"Os11g0533400","LOC_Os11g32890.1"]
[{"$nulls":30},"Os09g0516800",-1.0210227,{"$nulls":83},"FBN1","OsFBN1","FIBRILLIN 1","fibrillin 1",9," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009408 - response to heat, GO:0005504 - fatty acid binding, GO:0006629 - lipid metabolic process, GO:0009507 - chloroplast","TO:0000448 - filled grain percentage, TO:0000152 - panicle number, TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0002668 - jasmonic acid content",null,"Os09g0133600","LOC_Os09g04790.1"]
[{"$nulls":30},"Os04g0409500",-1.0225015,{"$nulls":83},"NPH1A","OsNPH1a","NONPHOTOTROPHIC HYPOCOTYL 1A","nonphototrophic hypocotyl 1a",12," Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0006468 - protein amino acid phosphorylation, GO:0005634 - nucleus, GO:0005886 - plasma membrane, GO:0005737 - cytoplasm, GO:0009416 - response to light stimulus, GO:0009882 - blue light photoreceptor activity, GO:0018298 - protein-chromophore linkage, GO:0004674 - protein serine/threonine kinase activity","TO:0000075 - light sensitivity","PO:0020033 - coleoptile ","Os12g0101800","LOC_Os12g01140.5, LOC_Os12g01140.4, LOC_Os12g01140.3, LOC_Os12g01140.2, LOC_Os12g01140.1"]
[{"$nulls":30},"Os09g0407200",-1.0244623,{"$nulls":83},"PI68","Pi68(t), Pi68","PYRICULARIA ORYZAE RESISTANCE 68","Magnaporthe grisea resistance-68, Blast resistance 68, malectin-serine threonine kinase",3," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000074 - blast disease, TO:0000468 - leaf blast disease resistance",null,"Os03g0281466","LOC_Os03g17310.1"]
[{"$nulls":30},"Os07g0586000",-1.0273014,{"$nulls":83},"NLP4","OsNLP4, NLP4.1, NLP4.2","NIN-LIKE PROTEIN 4","NLP transcription factor 4, NODULE INCEPTION-like protein 4, NIN-like protein 4",9," Vegetative organ - Culm,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010167 - response to nitrate, GO:0005634 - nucleus, GO:0005829 - cytosol, GO:0051171 - regulation of nitrogen compound metabolic process, GO:0048364 - root development, GO:0009610 - response to symbiotic fungus, GO:0009620 - response to fungus, GO:0019740 - nitrogen utilization, GO:0060359 - response to ammonium ion, GO:0042594 - response to starvation, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000346 - tiller number, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000303 - cold tolerance, TO:0001019 - root to total biomass ratio, TO:0000442 - plant fresh weight, TO:0000578 - root fresh weight, TO:0001013 - lateral root number, TO:0001012 - lateral root length, TO:0000227 - root length, TO:0000084 - root number, TO:0000656 - root development trait, TO:0000571 - shoot fresh weight, TO:0000449 - grain yield per plant, TO:0000371 - yield trait","PO:0007022 - seed imbibition stage , PO:0007520 - root development stage , PO:0009005 - root ","Os09g0549450","LOC_Os09g37710.1, LOC_Os09g37710.2"]
[{"$nulls":30},"Os08g0395300",-1.0286599,{"$nulls":83},"NRPD1A","OsNRPD1a","_NUCLEAR RNA POLYMERASE D1A","NUCLEAR RNA POLYMERASE D1a",4," Vegetative organ - Culm,  Tolerance and resistance - Disease resistance,  Reproductive organ - Panicle, Mode of branching","GO:0051607 - defense response to virus, GO:0030422 - production of siRNA involved in RNA interference, GO:0009615 - response to virus, GO:0006306 - DNA methylation, GO:0001618 - viral receptor activity","TO:0000213 - rice grassy stunt 1 and 2 virus resistance, TO:0000547 - primary branch number, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000207 - plant height, TO:0000040 - panicle length",null,"Os04g0572600","LOC_Os04g48370.1"]
[{"$nulls":30},"Os01g0834200",-1.0297617,{"$nulls":83},"PQT3","OsPQT3","PARAQUAT TOLERANCE 3",null,10," Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0006979 - response to oxidative stress, GO:0009628 - response to abiotic stimulus, GO:0009651 - response to salt stress, GO:0009635 - response to herbicide, GO:0003676 - nucleic acid binding, GO:0008270 - zinc ion binding, GO:0006397 - mRNA processing","TO:0006001 - salt tolerance, TO:0006032 - panicle size, TO:0000346 - tiller number, TO:0000058 - herbicide sensitivity, TO:0002657 - oxidative stress, TO:0000168 - abiotic stress trait, TO:0000396 - grain yield",null,"Os10g0431000","LOC_Os10g29560.1"]
[{"$nulls":30},"Os08g0428900",-1.0311145,{"$nulls":83},"_","OsNRT1.5, NRT1.5","_","nitrate transporter 1.5",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010167 - response to nitrate, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0022857 - transmembrane transporter activity",null,null,"Os07g0190650 "]
[{"$nulls":30},"Os08g0191000",-1.0330639,{"$nulls":83},"GMST1","OsGMST1","GOLGI LOCALIZED MONOSACCHARIDE TRANSPORTER 1","Golgi localized monosaccharide transporter 1",2," Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0008643 - carbohydrate transport, GO:0015293 - symporter activity, GO:0005794 - Golgi apparatus","TO:0006001 - salt tolerance, TO:0000333 - sugar content, TO:0006006 - monosaccharide content",null,"Os02g0274900","LOC_Os02g17500.3, LOC_Os02g17500.2, LOC_Os02g17500.1"]
[{"$nulls":30},"Os04g0592700",-1.0331787,{"$nulls":83},"NBS-STR1","NBS-Str1, OsNBS-Str1","_",null,2," Tolerance and resistance - Stress tolerance","GO:0010042 - response to manganese ion, GO:0046688 - response to copper ion, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000073 - manganese sensitivity, TO:0000021 - copper sensitivity, TO:0006001 - salt tolerance","PO:0005020 - vascular bundle , PO:0009005 - root ","Os02g0191000","LOC_Os02g09790.1"]
[{"$nulls":30},"Os02g0435400",-1.0346612,{"$nulls":83},"SIRP4","OsSIRP4","SALT-INDUCED RING FINGER PROTEIN 4","salt-induced RING finger protein 4",4," Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0008270 - zinc ion binding, GO:0016021 - integral to membrane, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0016874 - ligase activity, GO:0010498 - proteasomal protein catabolic process","TO:0000340 - total soluble sugar content, TO:0006001 - salt tolerance, TO:0006002 - proline content, TO:0000605 - hydrogen peroxide content",null,"Os04g0105100","LOC_Os04g01490.2, LOC_Os04g01490.1"]
[{"$nulls":30},"Os01g0144900",-1.0351561,{"$nulls":83},"KEAP1","OsKEAP1","KELCH-LIKE ECH-ASSOCIATED PROTEIN 1","Kelch-like ECH-associated protein 1",1," Vegetative organ - Culm,  Reproductive organ - panicle,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005737 - cytoplasm, GO:0051775 - response to redox state, GO:0009845 - seed germination, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0005634 - nucleus","TO:0000653 - seed development trait, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000440 - grain number per plant, TO:0000455 - seed set percent, TO:0000605 - hydrogen peroxide content, TO:0006002 - proline content, TO:0000437 - male sterility, TO:0000615 - abscisic acid sensitivity, TO:0002730 - grain shape, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000430 - germination rate","PO:0001170 - seed development stage , PO:0007057 - 0 seed germination stage ","Os01g0162500","LOC_Os01g06890.1"]
[{"$nulls":30},"Os03g0313800",-1.0358776,{"$nulls":83},"UBL5.2","OsUBL5.2","UBIQUITIN-LIKE PROTEIN 5.2","Ubiquitin-Like protein 5.2",11," Tolerance and resistance - Disease resistance","GO:0031386 - protein tag, GO:0006464 - protein modification process, GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0051607 - defense response to virus","TO:0000148 - viral disease resistance",null,"Os11g0145400","LOC_Os11g04880.1"]
[{"$nulls":30},"Os11g0258900",-1.0367392,{"$nulls":83},"PHD6","OsPHD6","PHD FINGER PROTEIN 6","Plant homeo-domain finger protein 6, PHD finger protein 6",1," Tolerance and resistance - Stress tolerance","GO:0003712 - transcription cofactor activity, GO:0016021 - integral to membrane, GO:0000785 - chromatin, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0045892 - negative regulation of transcription, DNA-dependent, GO:0042393 - histone binding, GO:0046872 - metal ion binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os01g0883400","LOC_Os01g66070.1"]
[{"$nulls":30},"Os08g0500800",-1.040484,{"$nulls":83},"ERA1","OsERA1, OsERA1.1, OsERA1.2","ENHANCED RESPONSE TO ABA1 ",null,3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0018343 - protein farnesylation, GO:0005965 - protein farnesyltransferase complex, GO:0010119 - regulation of stomatal movement, GO:0080022 - primary root development, GO:0009414 - response to water deprivation, GO:0009738 - abscisic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0004660 - protein farnesyltransferase activity, GO:0008270 - zinc ion binding, GO:0018342 - protein prenylation","TO:0000522 - stomatal conductance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance",null,"Os01g0737800","LOC_Os01g53600.2, LOC_Os01g53600.1"]
[{"$nulls":30},"Os04g0118400",-1.0423831,{"$nulls":83},"RLR1","OsRLR1","RPM1-LIKE RESISTANCE GENE 1","RPM1-like resistance gene 1",10," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0043531 - ADP binding, GO:0006952 - defense response, GO:0005634 - nucleus, GO:0009626 - plant-type hypersensitive response, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0031349 - positive regulation of defense response, GO:0005524 - ATP binding","TO:0000040 - panicle length, TO:0000112 - disease resistance, TO:0002759 - grain number, TO:0000357 - growth and development trait, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000605 - hydrogen peroxide content, TO:0000207 - plant height, TO:0000346 - tiller number",null,"Os10g0163040","LOC_Os10g07978.2, LOC_Os10g07978.1"]
[{"$nulls":30},"Os02g0187100",-1.0447325,{"$nulls":83},"MIR818B","OsmiR818b, miR818b, osa-miR818b, osa-MIR818b","MICRORNA818B","microRNA818b, osa-miRNA818b",5," Tolerance and resistance - Stress tolerance,  Other","GO:0006379 - mRNA cleavage, GO:0035195 - gene silencing by miRNA, GO:0016442 - RNA-induced silencing complex, GO:0009414 - response to water deprivation, GO:0035068 - micro-ribonucleoprotein complex","TO:0000276 - drought tolerance"]
[{"$nulls":30},"Os11g0137500",-1.0457659,{"$nulls":83},"_","SNAT","_","serotonin N-acetyltransferase",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005793 - ER-Golgi intermediate compartment, GO:0009651 - response to salt stress, GO:0006048 - UDP-N-acetylglucosamine biosynthetic process, GO:0009409 - response to cold, GO:0008080 - N-acetyltransferase activity, GO:0048029 - monosaccharide binding, GO:0004343 - glucosamine 6-phosphate N-acetyltransferase activity, GO:0009414 - response to water deprivation, GO:0030186 - melatonin metabolic process, GO:0007623 - circadian rhythm, GO:0005794 - Golgi apparatus, GO:0005783 - endoplasmic reticulum","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os05g0516300","LOC_Os05g44020.4, LOC_Os05g44020.3, LOC_Os05g44020.2, LOC_Os05g44020.1"]
[{"$nulls":30},"Os05g0132800",-1.0486656,{"$nulls":83},"HIPP6","OsHIPP6, OsaHIP06, HIP06","HEAVY-METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6","heavy-metal-associated isoprenylated plant protein 6",3," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0046872 - metal ion binding",null,null,"Os03g0412300","LOC_Os03g29920.2, LOC_Os03g29920.1"]
[{"$nulls":30},"Os06g0177300",-1.049184,{"$nulls":83},"HIPP9","OsHIPP9, OsaHIP09, HIP09","HEAVY-METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9","heavy-metal-associated isoprenylated plant protein 9",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os07g0682000","LOC_Os07g48390.1"]
[{"$nulls":30},"Os11g0183700",-1.051901,{"$nulls":83},"HIPP23","OsHIPP23, OsaHIP23, HIP23","HEAVY-METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 23","heavy-metal-associated isoprenylated plant protein 23",1," Tolerance and resistance - Stress tolerance","GO:0046872 - metal ion binding, GO:0009651 - response to salt stress, GO:0046686 - response to cadmium ion, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os01g0249700","LOC_Os01g14700.1"]
[{"$nulls":30},"Os04g0465500",-1.053696,{"$nulls":83},"PEI","OsPEI","PECTINESTERASE INHIBITOR","pectinesterase inhibitor, pectinesterase inhibitor domain containing protein",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0004857 - enzyme inhibitor activity","TO:0000203 - bacterial leaf streak disease resistance",null,"Os02g0534700","LOC_Os02g33130.1"]
[{"$nulls":30},"Os06g0699700",-1.0540363,{"$nulls":83},"_",null,"_","MYB-like DNA- binding domain-containing protein",11," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0030912 - response to deep water, GO:0009733 - response to auxin stimulus","TO:0000524 - submergence tolerance",null,"Os11g0128500","LOC_Os11g03440.1"]
[{"$nulls":30},"Os08g0493900",-1.055216,{"$nulls":83},"PIPR1","OsPiPR1","RICE BLAST PARTIAL RESISTANCE GENE 1 ","rice blast Partial Resistance gene 1",4," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os04g0621700","LOC_Os04g53050.1"]
[{"$nulls":30},"Os10g0564300",-1.057897,{"$nulls":83},"SAT1;3","OsSAT, SAT, OsSAT1;3","SERINE ACETYLTRANSFERASE 1;3","serine acetyl transferase, serine acetyltransferase 1;3",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009001 - serine O-acetyltransferase activity, GO:0006535 - cysteine biosynthetic process from serine, GO:0005829 - cytosol, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance","PO:0025034 - leaf ","Os05g0533500","LOC_Os05g45710.1"]
[{"$nulls":30},"Os02g0704300",-1.059157,{"$nulls":83},"VQ40","OsVQ40","VQ MOTIF-CONTAINING PROTEIN 40","VQ motif-containing protein 40, valine-glutamine protein 40",3," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os03g0190000","LOC_Os03g09045.1"]
[{"$nulls":30},"Os02g0532300",-1.0603195,{"$nulls":83},"OGR","PHF5A1, OsPHF5A1, PHF5A, OsPHF5A, OsOGR","OVEREXPRESSION-PHF5A GEX1A RESISTANCE","Overexpression-PHF5A GEX1A Resistance, spliceosomal component PHF5A1, PHF5A GEX1A Resistance",4," Tolerance and resistance - Stress tolerance","GO:0010188 - response to microbial phytotoxin, GO:0009651 - response to salt stress, GO:0043484 - regulation of RNA splicing, GO:0009635 - response to herbicide, GO:0000398 - nuclear mRNA splicing, via spliceosome, GO:0005686 - U2 snRNP, GO:0005689 - U12-type spliceosomal complex, GO:0071011 - precatalytic spliceosome","TO:0000058 - herbicide sensitivity, TO:0006001 - salt tolerance",null,"Os04g0663300","LOC_Os04g56760.1"]
[{"$nulls":30},"Os02g0818700",-1.0609192,{"$nulls":83},"USP3","OsUSP3","UNIVERSAL STRESS PROTEIN 3",null,1," Tolerance and resistance - Stress tolerance","GO:0046689 - response to mercury ion, GO:0046686 - response to cadmium ion, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0010038 - response to metal ion","TO:0000034 - chromium sensitivity, TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000507 - osmotic adjustment capacity, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity","PO:0009049 - inflorescence , PO:0005052 - plant callus , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root ","Os01g0511100","LOC_Os01g32780.1"]
[{"$nulls":30},"Os04g0444600",-1.061268,{"$nulls":83},"06CIRC02797","Os06circ02797","06 CIRCLE RNA 02797","06 circle RNA 02797, 06 circRNA 02797",6," Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance,  Character as QTL - Plant growth activity","GO:0009651 - response to salt stress","TO:0000293 - chlorophyll-a content, TO:0006001 - salt tolerance, TO:0000357 - growth and development trait, TO:0000295 - chlorophyll-b content","PO:0007057 - 0 seed germination stage "]
[{"$nulls":30},"Os04g0495700",-1.0638634,{"$nulls":83},"HADL","OsHADL","HAD-LIKE","haloacid dehalogenase-like hydrolase",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0016787 - hydrolase activity","TO:0000303 - cold tolerance",null,"Os03g0273800","LOC_Os03g16670.1"]
[{"$nulls":30},"Os12g0477100",-1.0680357,{"$nulls":83},"FEX","OsFEX","FLUORIDE EXPORTER","fluoride exporter",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0009739 - response to gibberellin stimulus, GO:0009725 - response to hormone stimulus, GO:0009737 - response to abscisic acid stimulus","TO:0000480 - nutrient sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000038 - fluorine sensitivity",null,"Os10g0567000","LOC_Os10g41749.5, LOC_Os10g41749.4, LOC_Os10g41749.3, LOC_Os10g41749.2, LOC_Os10g41749.1"]
[{"$nulls":30},"Os06g0724600",-1.0683821,{"$nulls":83},"DRE2B","OsDRE2b","_",null,4," Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0002238 - response to molecule of fungal origin, GO:0010200 - response to chitin, GO:0005737 - cytoplasm, GO:0005758 - mitochondrial intermembrane space, GO:0016226 - iron-sulfur cluster assembly, GO:0046872 - metal ion binding, GO:0009055 - electron carrier activity, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0050832 - defense response to fungus","TO:0000112 - disease resistance, TO:0000439 - fungal disease resistance",null,"Os04g0682050","LOC_Os04g58564.3, LOC_Os04g58564.2, LOC_Os04g58564.1"]
[{"$nulls":30},"Os11g0448000",-1.0691129,{"$nulls":83},"ESV1","OsESV1","EARLY STARVATION 1",null,3," Tolerance and resistance - Stress tolerance","GO:0005982 - starch metabolic process, GO:0051644 - plastid localization, GO:0009590 - detection of gravity, GO:0019252 - starch biosynthetic process, GO:0009959 - negative gravitropism, GO:0009630 - gravitropism, GO:0043036 - starch grain, GO:0009570 - chloroplast stroma","TO:0000696 - starch content, TO:0002693 - gravity response trait",null,"Os03g0133300","LOC_Os03g04100.2, LOC_Os03g04100.1"]
[{"$nulls":30},"Os08g0422401",-1.0694566,{"$nulls":83},"OCPI1","OsCPI1, CPI1","O. SATIVA CHYMOTRYPSIN INHIBITOR-LIKE 1","Oryza sativa chymotrypsin inhibitor-like 1, CHYMOTRYPSIN INHIBITOR-LIKE 1",1," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0004867 - serine-type endopeptidase inhibitor activity, GO:0009611 - response to wounding","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000153 - relative yield, TO:0000615 - abscisic acid sensitivity",null,"Os01g0615050"]
[{"$nulls":30},"Os05g0152700",-1.0719957,{"$nulls":83},"_",null,"_","mTERF-like protein, mitochondrial transcription termination factor-like protein",8," Tolerance and resistance - Stress tolerance","GO:0003690 - double-stranded DNA binding, GO:0009408 - response to heat, GO:0009507 - chloroplast, GO:0006355 - regulation of transcription, DNA-dependent, GO:0006353 - transcription termination, GO:0032502 - developmental process, GO:0009658 - chloroplast organization","TO:0000259 - heat tolerance","PO:0025034 - leaf ","Os08g0528700","LOC_Os08g41690.1"]
[{"$nulls":30},"Os07g0486500",-1.0734267,{"$nulls":83},"SDR7-6","OsSDR7-6","SHORT-CHAIN ALCOHOL DEHYDROGENASE/REDUCTASE 7-6","short-chain alcohol dehydrogenase/reductase 7-6",7," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0060548 - negative regulation of cell death, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0070265 - necrotic cell death, GO:0009416 - response to light stimulus, GO:0016491 - oxidoreductase activity, GO:0005783 - endoplasmic reticulum, GO:0009863 - salicylic acid mediated signaling pathway","TO:0000175 - bacterial blight disease resistance, TO:0000075 - light sensitivity, TO:0000399 - grain thickness, TO:0000207 - plant height, TO:0000040 - panicle length, TO:0000590 - grain weight, TO:0000592 - 1000-dehulled grain weight, TO:0000455 - seed set percent, TO:0000397 - grain size, TO:0000605 - hydrogen peroxide content, TO:0002668 - jasmonic acid content, TO:0000074 - blast disease",null,"Os07g0663900 ","LOC_Os07g46860.1"]
[{"$nulls":30},"Os10g0484900",-1.0735493,{"$nulls":83},"CYP87A3","OsCYP87A3","CYTOCHROME P450 87A3","Cytochrome P450 87A3",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016125 - sterol metabolic process, GO:0030659 - cytoplasmic vesicle membrane, GO:0009733 - response to auxin stimulus, GO:0009416 - response to light stimulus, GO:0009642 - response to light intensity, GO:0010114 - response to red light, GO:0010218 - response to far red light, GO:0009637 - response to blue light, GO:0009734 - auxin mediated signaling pathway, GO:0005634 - nucleus, GO:0016021 - integral to membrane, GO:0020037 - heme binding, GO:0005506 - iron ion binding, GO:0004497 - monooxygenase activity, GO:0016491 - oxidoreductase activity, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0016132 - brassinosteroid biosynthetic process, GO:0010268 - brassinosteroid homeostasis, GO:0005737 - cytoplasm, GO:0005938 - cell cortex, GO:0046898 - response to cycloheximide","TO:0000130 - far red light sensitivity, TO:0000159 - blue light sensitivity, TO:0000158 - red light sensitivity, TO:0000075 - light sensitivity, TO:0000460 - light intensity sensitivity, TO:0000163 - auxin sensitivity","PO:0009005 - root , PO:0007045 - coleoptile emergence stage , PO:0020033 - coleoptile ","Os04g0570000","LOC_Os04g48170.1"]
[{"$nulls":30},"Os03g0288800",-1.0771469,{"$nulls":83},"_","PRP","_","proline-rich protein",10," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os10g0150300","LOC_Os10g05950.1"]
[{"$nulls":30},"Os04g0560400",-1.0774817,{"$nulls":83},"_",null,"_","extra-large G-protein-related",5," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os05g0586400","LOC_Os05g50910.1, LOC_Os05g50910.2"]
[{"$nulls":30},"Os04g0577000",-1.0784769,{"$nulls":83},"ZDS","OsZDS","ZETA-CAROTENE DESATURASE","zeta-carotene desaturase",7," Biochemical character,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0016120 - carotene biosynthetic process, GO:0009416 - response to light stimulus, GO:0016719 - carotene 7,8-desaturase activity, GO:0050660 - FAD binding, GO:0016491 - oxidoreductase activity, GO:0016117 - carotenoid biosynthetic process","TO:0000075 - light sensitivity",null,"Os07g0204900","LOC_Os07g10490.1"]
[{"$nulls":30},"Os07g0294700",-1.0810591,{"$nulls":83},"USP11","OsUSP11","UNIVERSAL STRESS PROTEIN 11","universal stress protein 11",2," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance","PO:0009005 - root , PO:0025034 - leaf , PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0005052 - plant callus ","Os02g0705400","LOC_Os02g47650.1"]
[{"$nulls":30},"Os01g0976700",-1.0826405,{"$nulls":83},"USP36","OsUSP36","UNIVERSAL STRESS PROTEIN 36","universal stress protein 36",10," Tolerance and resistance - Stress tolerance","GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0009413 - response to flooding, GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000524 - submergence tolerance, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance","PO:0009009 - plant embryo , PO:0009049 - inflorescence , PO:0005052 - plant callus , PO:0009005 - root , PO:0025034 - leaf ","Os10g0437500","LOC_Os10g30150.2, LOC_Os10g30150.1"]
[{"$nulls":30},"Os02g0265400",-1.0839249,{"$nulls":83},"FLZ11","OsFLZ11","FCS-LIKE ZINC FINGER PROTEIN 11",null,3," Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009413 - response to flooding, GO:0005737 - cytoplasm, GO:0005634 - nucleus","TO:0000524 - submergence tolerance, TO:0000015 - oxygen sensitivity","PO:0009010 - seed , PO:0009030 - carpel , PO:0009006 - shoot system , PO:0009089 - endosperm , PO:0025034 - leaf , PO:0009049 - inflorescence , PO:0009066 - anther , PO:0009009 - plant embryo ","Os03g0665200","LOC_Os03g46260.3, LOC_Os03g46260.2, LOC_Os03g46260.1"]
[{"$nulls":30},"Os12g0406200",-1.0862843,{"$nulls":83},"FLZ24","OsFLZ24","FCS-LIKE ZINC FINGER PROTEIN 24",null,8," Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia","TO:0000015 - oxygen sensitivity",null,"Os08g0407600","LOC_Os08g31510.1"]
[{"$nulls":30},"Os03g0651700",-1.087021,{"$nulls":83},"FLZ27","OsFLZ27","FCS-LIKE ZINC FINGER PROTEIN 27",null,9," Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0005737 - cytoplasm, GO:0009413 - response to flooding, GO:0034059 - response to anoxia","TO:0000524 - submergence tolerance, TO:0000015 - oxygen sensitivity","PO:0009006 - shoot system , PO:0009089 - endosperm , PO:0009009 - plant embryo , PO:0009010 - seed , PO:0009030 - carpel , PO:0009066 - anther , PO:0009049 - inflorescence , PO:0025034 - leaf ","Os09g0433800","LOC_Os09g26370.1"]
[{"$nulls":30},"Os01g0209000",-1.0892192,{"$nulls":83},"_",null,"_","expressed protein",1," Tolerance and resistance - Stress tolerance","GO:0016021 - integral to membrane, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os01g0962100","LOC_Os01g73110.1"]
[{"$nulls":30},"Os09g0280600",-1.09122,{"$nulls":83},"MFAP1","OsMFAP1","MICROFIBRILLAR-ASSOCIATED PROTEIN 1","microfibrillar-associated protein 1",6," Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Other","GO:0002237 - response to molecule of bacterial origin, GO:0052542 - callose deposition during defense response, GO:0002679 - respiratory burst during defense response, GO:0050832 - defense response to fungus, GO:0002238 - response to molecule of fungal origin","TO:0000449 - grain yield per plant, TO:0000590 - grain weight, TO:0002759 - grain number, TO:0000455 - seed set percent, TO:0000207 - plant height, TO:0006032 - panicle size, TO:0000396 - grain yield, TO:0000152 - panicle number, TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000346 - tiller number, TO:0000371 - yield trait","PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0020142 - stem internode ","Os06g0335101","LOC_Os06g22850.2"]
[{"$nulls":30},"Os06g0255400",-1.0928555,{"$nulls":83},"MORE1A","OsMORE1a","MAGNAPORTHE ORYZAE RESISTANCE 1A","Magnaporthe oryzae resistance 1a",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0000272 - polysaccharide catabolic process, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds","TO:0000074 - blast disease",null,"Os03g0201500","LOC_Os03g10440.1"]
[{"$nulls":30},"Os08g0460700",-1.0931798,{"$nulls":83},"MORE1B","OsMORE1b","MAGNAPORTHE ORYZAE RESISTANCE 1B","Magnaporthe oryzae resistance 1b",3," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0000272 - polysaccharide catabolic process, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os03g0201901","LOC_Os03g10478.1"]
[{"$nulls":30},"Os03g0267700",-1.0945988,{"$nulls":83},"MORE1K","OsMORE1k","MAGNAPORTHE ORYZAE RESISTANCE 1K","Magnaporthe oryzae resistance 1k",5," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds, GO:0000272 - polysaccharide catabolic process","TO:0000074 - blast disease",null,"Os05g0319900","LOC_Os05g25560.1"]
[{"$nulls":30},"Os03g0388100",-1.0975457,{"$nulls":83},"UGT85E1","OsUGT85E1","UDP-DEPENDENT GLYCOSYLTRANSFERASE 85E1","Uridine diphosphate-dependent glycosyltransferase 85E1, UDP-dependent glycosyltransferase 85E1",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0080043 - quercetin 3-O-glucosyltransferase activity, GO:0080044 - quercetin 7-O-glucosyltransferase activity, GO:0008194 - UDP-glycosyltransferase activity, GO:0009414 - response to water deprivation, GO:0010115 - regulation of abscisic acid biosynthetic process","TO:0000227 - root length, TO:0000605 - hydrogen peroxide content, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000520 - stomatal closure rate, TO:0002667 - abscisic acid content, TO:0000131 - leaf water potential, TO:0002657 - oxidative stress, TO:0006002 - proline content, TO:0000333 - sugar content, TO:0000340 - total soluble sugar content",null,"Os02g0755500","LOC_Os02g51900.1"]
[{"$nulls":30},"Os10g0486000",-1.1010903,{"$nulls":83},"_","OsTDC2, TDC2","_","tryptophan decarboxylase 2",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006520 - cellular amino acid metabolic process, GO:0016831 - carboxy-lyase activity, GO:0009646 - response to absence of light, GO:0009651 - response to salt stress, GO:0009416 - response to light stimulus, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0030170 - pyridoxal phosphate binding, GO:0005737 - cytoplasm","TO:0000259 - heat tolerance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000075 - light sensitivity",null,"Os05g0510600","LOC_Os05g43510.1"]
[{"$nulls":30},"Os01g0199400",-1.102625,{"$nulls":83},"_",null,"_",null,8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010431 - seed maturation, GO:0009845 - seed germination, GO:0000302 - response to reactive oxygen species, GO:0034599 - cellular response to oxidative stress, GO:0042744 - hydrogen peroxide catabolic process, GO:0004601 - peroxidase activity, GO:0046872 - metal ion binding, GO:0020037 - heme binding, GO:0016688 - L-ascorbate peroxidase activity, GO:0046685 - response to arsenic, GO:0005737 - cytoplasm","TO:0000031 - silicon sensitivity",null,"Os08g0522400","LOC_Os08g41090.1"]
[{"$nulls":30},"Os07g0604550",-1.105702,{"$nulls":83},"CRR1",null,"COMPROMISED RESISTANCE TO RUST 1  ","compromised resistance to rust 1",10," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000112 - disease resistance"]
[{"$nulls":30},"Os10g0495600",-1.1068376,{"$nulls":83},"DT11","OsDT11","DROUGHT TOLERANCE 11 ","drought tolerance 11",11," Tolerance and resistance - Stress tolerance","GO:0006970 - response to osmotic stress, GO:0009414 - response to water deprivation, GO:0005576 - extracellular region, GO:0009405 - pathogenesis, GO:0009738 - abscisic acid mediated signaling, GO:0008200 - ion channel inhibitor activity","TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000566 - stomatal frequency, TO:0000478 - abscisic acid concentration, TO:0000276 - drought tolerance",null,"Os11g0211800","LOC_Os11g10590.1"]
[{"$nulls":30},"Os05g0152266",-1.1075897,{"$nulls":83},"PHR4","OsPHR4, Os-PHR4","PHOSPHATE STARVATION RESPONSE 4","Phosphate Starvation Response4, PHOSPHATE RESPONSE4",6," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048767 - root hair elongation, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0016036 - cellular response to phosphate starvation, GO:0042594 - response to starvation, GO:0055062 - phosphate ion homeostasis, GO:0055081 - anion homeostasis","TO:0002665 - root hair length, TO:0000168 - abiotic stress trait","PO:0005020 - vascular bundle , PO:0007519 - 5 root hair formation stage , PO:0000034 - vascular system , PO:0000025 - root tip , PO:0000016 - lateral root primordium , PO:0020124 - root stele ","Os06g0703900 ","LOC_Os06g49040.1"]
[{"$nulls":30},"Os07g0173100",-1.1094416,{"$nulls":83},"CUL3A","OsCUL3a, CUL3a","CULLIN 3A","Cullin3a, Cullin 3a",2," Tolerance and resistance - Lesion mimic","GO:0031625 - ubiquitin protein ligase binding, GO:0042787 - protein ubiquitination during ubiquitin-dependent protein catabolic process, GO:0031461 - cullin-RING ubiquitin ligase complex, GO:0000302 - response to reactive oxygen species, GO:0060548 - negative regulation of cell death, GO:0031348 - negative regulation of defense response, GO:0042743 - hydrogen peroxide metabolic process","TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response",null,"Os02g0746000","LOC_Os02g51180.1"]
[{"$nulls":30},"Os02g0680700",-1.1112238,{"$nulls":83},"SPL31",null,"SPOTTED LEAF 31","spotted leaf 31",12," Vegetative organ - Leaf,  Tolerance and resistance - Lesion mimic","GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0012501 - programmed cell death","TO:0000180 - spikelet fertility, TO:0000382 - 1000-seed weight, TO:0000063 - mimic response, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage "]
[{"$nulls":30},"Os04g0380500",-1.1127807,{"$nulls":83},"LAC23","OsLAC23, OsLAC19, LAC19","LACCASE 23","laccase 23",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010038 - response to metal ion, GO:0046686 - response to cadmium ion, GO:0005507 - copper ion binding, GO:0046688 - response to copper ion, GO:0046685 - response to arsenic, GO:0046274 - lignin catabolic process, GO:0016722 - oxidoreductase activity, oxidizing metal ions, GO:0048046 - apoplast","TO:0000034 - chromium sensitivity, TO:0000021 - copper sensitivity",null,"Os11g0641500      ","LOC_Os11g42200.1"]
[{"$nulls":30},"Os12g0116600",-1.1165165,{"$nulls":83},"_","OsAKR, AKR","_","aldo-keto reductase",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0051775 - response to redox state, GO:0016491 - oxidoreductase activity",null,null,"Os04g0339400","LOC_Os04g27060.1"]
[{"$nulls":30},"Os01g0244500",-1.1168846,{"$nulls":83},"_",null,"_",null,4," Tolerance and resistance - Stress tolerance","GO:0003723 - RNA binding, GO:0004519 - endonuclease activity, GO:0009414 - response to water deprivation, GO:0005739 - mitochondrion, GO:0009451 - RNA modification","TO:0000276 - drought tolerance",null,"Os04g0612800","LOC_Os04g52290.1"]
[{"$nulls":30},"Os06g0236900",-1.1189541,{"$nulls":83},"PDHE1A","OsPDHE1-A","PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-1 ","pyruvate dehydrogenase E1 component subunit alpha-1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005759 - mitochondrial matrix, GO:0009409 - response to cold, GO:0006096 - glycolysis, GO:0006086 - acetyl-CoA biosynthetic process from pyruvate, GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity","TO:0000303 - cold tolerance",null,"Os02g0739600","LOC_Os02g50620.1"]
[{"$nulls":30},"Os05g0215600",-1.1218128,{"$nulls":83},"CPA3","OsCPA3","CARBAMOYLPUTRESCINE AMIDASE 3","N-carbamoyl-Put amidohydrolase 3",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006596 - polyamine biosynthetic process, GO:0006807 - nitrogen compound metabolic process, GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os06g0206000","LOC_Os06g10420.1"]
[{"$nulls":30},"Os05g0147400",-1.1220535,{"$nulls":83},"CPA4","OsCPA4","CARBAMOYLPUTRESCINE AMIDASE 4","N-carbamoyl-Put amidohydrolase 4",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, GO:0009651 - response to salt stress, GO:0006596 - polyamine biosynthetic process, GO:0006807 - nitrogen compound metabolic process, GO:0046686 - response to cadmium ion","TO:0006001 - salt tolerance",null,"Os12g0502500","LOC_Os12g31830.1"]
[{"$nulls":30},"Os10g0360900",-1.1230931,{"$nulls":83},"DAO3","OsDAO3, OsCuDAO3, CuDAO3","DIAMINE OXIDASE 3","diamine oxidase 3, Copper-containing diamine oxidase 3",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005507 - copper ion binding, GO:0048038 - quinone binding, GO:0008131 - amine oxidase activity, GO:0006598 - polyamine catabolic process, GO:0009308 - amine metabolic process","TO:0006001 - salt tolerance",null,"Os04g0136200","LOC_Os04g04950.1"]
[{"$nulls":30},"Os09g0386600",-1.1238536,{"$nulls":83},"SPL33","LMM5.1, SPL33/LMM5.1","SPOTTED LEAF 33","spotted leaf 33, Lesion mimic mutant 5.1",1," Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Lesion mimic","GO:0008270 - zinc ion binding, GO:0009658 - chloroplast organization, GO:0003924 - GTPase activity, GO:0005525 - GTP binding, GO:0003746 - translation elongation factor activity, GO:0005622 - intracellular, GO:0006309 - DNA fragmentation involved in apoptosis, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0042742 - defense response to bacterium, GO:0031348 - negative regulation of defense response, GO:0012501 - programmed cell death, GO:0010150 - leaf senescence, GO:0005783 - endoplasmic reticulum","TO:0000605 - hydrogen peroxide content, TO:0000074 - blast disease, TO:0000496 - carotenoid content, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0006007 - polysaccharide content, TO:0000175 - bacterial blight disease resistance, TO:0000063 - mimic response, TO:0000249 - leaf senescence","PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence , PO:0025034 - leaf ","Os01g0116600","LOC_Os01g02720.1, LOC_Os01g02720.2"]
[{"$nulls":30},"Os01g0924300",-1.1260242,{"$nulls":83},"MAPKKK11","OsMAPKKK11","MAPK KINASE KINASE 11","MAPK kinase kinase 11",7," Tolerance and resistance - Disease resistance","GO:0005737 - cytoplasm, GO:0005524 - ATP binding, GO:0004702 - receptor signaling protein serine/threonine kinase activity, GO:0002238 - response to molecule of fungal origin, GO:0043410 - positive regulation of MAPKKK cascade, GO:0010200 - response to chitin",null,null,"Os07g0119000 ","LOC_Os07g02780.1"]
[{"$nulls":30},"Os10g0118900",-1.1277162,{"$nulls":83},"_","LEA D-34","_","late embryogenesis abundant protein D-34",12," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os12g0626500","LOC_Os12g43140.1"]
[{"$nulls":30},"Os03g0421400",-1.1289306,{"$nulls":83},"_","LMM5.4","_","Lesion mimic mutant 5.4",4," Tolerance and resistance - Lesion mimic","GO:0005525 - GTP binding, GO:0050832 - defense response to fungus, GO:0043069 - negative regulation of programmed cell death, GO:0042742 - defense response to bacterium, GO:0031348 - negative regulation of defense response, GO:0008270 - zinc ion binding, GO:0005622 - intracellular, GO:0003924 - GTPase activity, GO:0003746 - translation elongation factor activity","TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content, TO:0000175 - bacterial blight disease resistance, TO:0000063 - mimic response",null,"Os04g0595300"]
[{"$nulls":30},"Os05g0159700",-1.1311752,{"$nulls":83},"LBD38","OsLBD38, HINGE2, OsHINGE2","LATERAL ORGAN BOUNDARIES DOMAIN 38","lateral organ boundaries domain protein 38, Highly Induced by Nitrate Gene 2",3," Reproductive organ - Heading date,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048511 - rhythmic process, GO:0005634 - nucleus, GO:0003700 - transcription factor activity, GO:0010167 - response to nitrate, GO:2000028 - regulation of photoperiodism, flowering, GO:0048573 - photoperiodism, flowering, GO:0045893 - positive regulation of transcription, DNA-dependent","TO:0000447 - filled grain number, TO:0000371 - yield trait, TO:0000207 - plant height, TO:0000137 - days to heading, TO:0002616 - flowering time, TO:0000040 - panicle length",null,"Os03g0609500","LOC_Os03g41330.1"]
[{"$nulls":30},"Os09g0525200",-1.1353985,{"$nulls":83},"_","OsUEV1A, UEV1A","_","Ubc-E2 variant 1A",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0006301 - postreplication repair, GO:0016020 - membrane, GO:0031625 - ubiquitin protein ligase binding, GO:0070534 - protein K63-linked ubiquitination, GO:0006974 - response to DNA damage stimulus, GO:0004842 - ubiquitin-protein ligase activity, GO:0005634 - nucleus",null,null,"Os03g0712300","LOC_Os03g50440.1"]
[{"$nulls":30},"Os03g0243300",-1.1360397,{"$nulls":83},"GLYR2","OsGLYR2, OsGR2, GR2","GLYOXYLATE/SUCCINIC SEMIALDEHYDE REDUCTASE 2","glyoxylate/succinic semialdehyde reductase 2, glyoxylate reductase 2",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0051287 - NAD or NADH binding, GO:0005739 - mitochondrion, GO:0009536 - plastid, GO:0010037 - response to carbon dioxide, GO:0009648 - photoperiodism, GO:0046487 - glyoxylate metabolic process, GO:0070402 - NADPH binding, GO:0030267 - glyoxylate reductase (NADP) activity, GO:0009570 - chloroplast stroma, GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity","TO:0000207 - plant height, TO:0000229 - photoperiod sensitivity",null,"Os01g0574600","LOC_Os01g39270.1"]
[{"$nulls":30},"Os03g0843000",-1.137765,{"$nulls":83},"HAD1","OsHAD1","HALOACID DEHALOGENASE 1","haloacid dehalogenase 1",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0003993 - acid phosphatase activity, GO:0016787 - hydrolase activity, GO:0042594 - response to starvation, GO:0016020 - membrane, GO:0008152 - metabolic process",null,null,"Os03g0834050","LOC_Os03g61829.1"]
[{"$nulls":30},"Os05g0353400",-1.138255,{"$nulls":83},"NTP5","OsNTP5","NUCLEOTIDYL TRANSFERASE PROTEIN 5","nucleotidyl transferase protein 5",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016779 - nucleotidyltransferase activity, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os03g0210800","LOC_Os03g11240.1"]
[{"$nulls":30},"Os04g0674200",-1.1394438,{"$nulls":83},"NTP9","OsNTP9","NUCLEOTIDYL TRANSFERASE PROTEIN 9","nucleotidyl transferase protein 9",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os08g0559900","LOC_Os08g44560.1"]
[{"$nulls":30},"Os01g0898300",-1.1400275,{"$nulls":83},"NTP13","OsNTP13","NUCLEOTIDYL TRANSFERASE PROTEIN 13","nucleotidyl transferase protein 13",12," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016740 - transferase activity, GO:0009409 - response to cold, GO:0009414 - response to water deprivation","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance","PO:0009049 - inflorescence ","Os12g0283100","LOC_Os12g18530.1"]
[{"$nulls":30},"Os07g0110900",-1.1416575,{"$nulls":83},"PEX1","OsPEX1","POLLEN EXTENSIN 1","Extensin family protein, pollen extensin 1",11," Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009809 - lignin biosynthetic process","TO:0000068 - lodging incidence, TO:0000051 - stem strength, TO:0000207 - plant height, TO:0000731 - lignin content",null,"Os11g0657400","LOC_Os11g43640.1"]
[{"$nulls":30},"Os03g0333300",-1.1428794,{"$nulls":83},"_",null,"_","CDK5RAP1-like protein",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0009651 - response to salt stress, GO:0046872 - metal ion binding, GO:0016740 - transferase activity, GO:0006400 - tRNA modification, GO:0051539 - 4 iron, 4 sulfur cluster binding","TO:0006001 - salt tolerance",null,"Os11g0592800","LOC_Os11g38030.1"]
[{"$nulls":30},"Os01g0372700",-1.1450434,{"$nulls":83},"_",null,"_","Acyl desaturase",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0045300 - acyl-[acyl-carrier-protein] desaturase activity, GO:0006633 - fatty acid biosynthetic process, GO:0001666 - response to hypoxia, GO:0046872 - metal ion binding, GO:0009507 - chloroplast",null,null,"Os01g0880800 ","LOC_Os01g65830.1"]
[{"$nulls":30},"Os02g0637800",-1.1456393,{"$nulls":83},"MGD3","OsMGD3","MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 3","\\Leucine-rich repeat, cysteine-containing subtype-containing protein\\\", MGDG synthase 3\"",8," Biochemical character,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Stress tolerance","GO:0009566 - fertilization, GO:0006794 - phosphorus utilization, GO:0042594 - response to starvation, GO:0031969 - chloroplast membrane, GO:0009247 - glycolipid biosynthetic process, GO:0046509 - 1,2-diacylglycerol 3-beta-galactosyltransferase activity","TO:0000604 - fat and essential oil content, TO:0000627 - relative phosphorus utilization efficiency, TO:0000102 - phosphorus sensitivity","PO:0025034 - leaf ","Os08g0299400                        ","LOC_Os08g20420.2, LOC_Os08g20420.1"]
[{"$nulls":30},"Os09g0405300",-1.1477675,{"$nulls":83},"S40-4","OsS40-4","S40 PROTEIN 4","S40 protein 4",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus","TO:0000074 - blast disease, TO:0000011 - nitrogen sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000249 - leaf senescence, TO:0000172 - jasmonic acid sensitivity","PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence , PO:0020148 - shoot apical meristem , PO:0025034 - leaf , PO:0009010 - seed , PO:0009005 - root ","Os03g0113900","LOC_Os03g02280.1"]
[{"$nulls":30},"Os02g0437300",-1.1486195,{"$nulls":83},"S40-9","OsS40-9","S40 PROTEIN 9","S40 protein 9",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0010150 - leaf senescence, GO:0005737 - cytoplasm, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000249 - leaf senescence","PO:0020148 - shoot apical meristem , PO:0009010 - seed , PO:0009049 - inflorescence , PO:0025034 - leaf , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage ","Os01g0862600 ","LOC_Os01g64300.1"]
[{"$nulls":30},"Os04g0576700",-1.1499333,{"$nulls":83},"S40-15","OsS40-15","S40 PROTEIN 15","S40 protein 15",7," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0005737 - cytoplasm, GO:0010150 - leaf senescence, GO:0009651 - response to salt stress","TO:0000249 - leaf senescence, TO:0000074 - blast disease, TO:0006001 - salt tolerance","PO:0009010 - seed , PO:0025034 - leaf , PO:0009005 - root , PO:0001054 - 4 leaf senescence stage , PO:0009049 - inflorescence ","Os07g0516300","LOC_Os07g33270.1"]
[{"$nulls":30},"Os07g0558200",-1.1511755,{"$nulls":83},"ALDH3B1    ","OsALDH3B1","ALDEHYDE DEHYDROGENASE 3B1","Aldehyde dehydrogenase 3B1",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009629 - response to gravity, GO:0004030 - aldehyde dehydrogenase [NAD(P)+] activity, GO:0006081 - cellular aldehyde metabolic process","TO:0002693 - gravity response trait",null,"Os04g0540600","LOC_Os04g45720.1"]
[{"$nulls":30},"Os05g0554100",-1.1518464,{"$nulls":83},"FLZ18","OsFLZ18","FCS-LIKE ZINC FINGER PROTEIN 18","DUF581 domain- containing protein gene",6," Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0009413 - response to flooding, GO:0009723 - response to ethylene stimulus, GO:0034059 - response to anoxia, GO:0005634 - nucleus","TO:0000015 - oxygen sensitivity, TO:0000524 - submergence tolerance, TO:0000173 - ethylene sensitivity",null,"Os06g0125200","LOC_Os06g03520.1"]
[{"$nulls":30},"Os11g0140300",-1.1535033,{"$nulls":83},"PI59","Pi59(t)","PYRICULARIA ORYZAE RESISTANCE 59","Magnaporthe grisea resistance-59, Blast resistance 59",6," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease"]
[{"$nulls":30},"Os01g0869200",-1.1575942,{"$nulls":83},"ALMT4","OsALMT4","ALUMINUM-ACTIVATED MALATE TRANSPORTER 4","Aluminum-activated malate transporter 4",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0015140 - malate transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0005886 - plasma membrane, GO:0009705 - plant-type vacuole membrane, GO:0006970 - response to osmotic stress, GO:0009416 - response to light stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009733 - response to auxin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009642 - response to light intensity","TO:0000615 - abscisic acid sensitivity, TO:0000075 - light sensitivity, TO:0000652 - leaf necrosis, TO:0000073 - manganese sensitivity, TO:0000095 - osmotic response sensitivity, TO:0000460 - light intensity sensitivity, TO:0000163 - auxin sensitivity","PO:0009001 - fruit , PO:0009006 - shoot system , PO:0025034 - leaf , PO:0009005 - root , PO:0009046 - flower ","Os01g0221600  ","LOC_Os01g12210.1"]
[{"$nulls":30},"Os12g0616500",-1.15791,{"$nulls":83},"_","OsGATA21, GATA21, OsGATA21a, OsGATA21b, DLN117, OSDLN117","_","GATA transcription factor 21, GATA factor 21, DLN repressor 117, DLN motif protein 117",4," Tolerance and resistance - Stress tolerance,  Other","GO:0009414 - response to water deprivation, GO:0005667 - transcription factor complex, GO:0005634 - nucleus, GO:0003682 - chromatin binding, GO:0008270 - zinc ion binding, GO:0009737 - response to abscisic acid stimulus, GO:0030154 - cell differentiation","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity",null,"Os04g0544500","LOC_Os04g46020.2, LOC_Os04g46020.1"]
[{"$nulls":30},"Os01g0926300",-1.158857,{"$nulls":83},"_","RPS6, OsRPS6","_","ribosomal protein S6, ribosomal protein small subunit 6",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0042542 - response to hydrogen peroxide, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0003735 - structural constituent of ribosome, GO:0005840 - ribosome, GO:0006412 - translation, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0070181 - SSU rRNA binding","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0002657 - oxidative stress",null,"Os01g0220300","LOC_Os01g12090.1"]
[{"$nulls":30},"Os01g0392100",-1.1612068,{"$nulls":83},"_","RPS10, OsRPS10","_","ribosomal protein S10, ribosomal protein small subunit 10",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0022627 - cytosolic small ribosomal subunit, GO:0009414 - response to water deprivation, GO:0000028 - ribosomal small subunit assembly, GO:0003735 - structural constituent of ribosome, GO:0003723 - RNA binding, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0042542 - response to hydrogen peroxide, GO:0050832 - defense response to fungus","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0002657 - oxidative stress, TO:0000276 - drought tolerance",null,"Os01g0962600","LOC_Os01g73160.1"]
[{"$nulls":30},"Os11g0265300",-1.1622481,{"$nulls":83},"RPS18B","RPS18b","RIBOSOMAL PROTEIN S18B","ribosomal protein S18b",7," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0003723 - RNA binding, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0006412 - translation, GO:0005840 - ribosome, GO:0003735 - structural constituent of ribosome","TO:0000615 - abscisic acid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0002657 - oxidative stress, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os07g0174200","LOC_Os07g07770.1"]
[{"$nulls":30},"Os09g0109800",-1.1632508,{"$nulls":83},"RPS27","OsRPS27","RIBOSOMAL PROTEIN S27","ribosomal protein S27, ribosomal protein small subunit 27",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0050832 - defense response to fungus, GO:0046872 - metal ion binding, GO:0000028 - ribosomal small subunit assembly, GO:0022627 - cytosolic small ribosomal subunit, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0006412 - translation, GO:0042542 - response to hydrogen peroxide, GO:0003735 - structural constituent of ribosome","TO:0002657 - oxidative stress, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000255 - sheath blight disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance",null,"Os04g0346100","LOC_Os04g27860.1"]
[{"$nulls":30},"Os04g0107200",-1.164533,{"$nulls":83},"_","OsRPL6, RPL6","_","ribosomal protein L6, ribosomal protein large subunit 6",4," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0009753 - response to jasmonic acid stimulus, GO:0042742 - defense response to bacterium, GO:0006412 - translation, GO:0009408 - response to heat, GO:0003723 - RNA binding, GO:0003735 - structural constituent of ribosome, GO:0009751 - response to salicylic acid stimulus, GO:0000027 - ribosomal large subunit assembly, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0042542 - response to hydrogen peroxide, GO:0022625 - cytosolic large ribosomal subunit","TO:0000175 - bacterial blight disease resistance, TO:0002657 - oxidative stress, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance","PO:0020103 - flag leaf , PO:0009005 - root , PO:0009006 - shoot system , PO:0020031 - radicle , PO:0020032 - plumule ","Os04g0473400","LOC_Os04g39700.1"]
[{"$nulls":30},"Os04g0479200",-1.1675345,{"$nulls":83},"_","OsRPL27.3, RPL27.3","_","ribosomal protein L27.3, ribosomal protein large subunit 27.3",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0006412 - translation, GO:0009409 - response to cold, GO:0042542 - response to hydrogen peroxide, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0022625 - cytosolic large ribosomal subunit, GO:0009753 - response to jasmonic acid stimulus, GO:0009408 - response to heat, GO:0003735 - structural constituent of ribosome, GO:0009414 - response to water deprivation","TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0002657 - oxidative stress","PO:0009046 - flower , PO:0009006 - shoot system , PO:0009089 - endosperm ","Os02g0284600","LOC_Os02g18380.1"]
[{"$nulls":30},"Os03g0261900",-1.1710826,{"$nulls":83},"RPL38","OsRPL38","RIBOSOMAL PROTEIN L38","ribosomal protein  L38, ribosomal protein large subunit 38",11," Tolerance and resistance - Stress tolerance,  Other","GO:0022625 - cytosolic large ribosomal subunit, GO:0042542 - response to hydrogen peroxide, GO:0022618 - ribonucleoprotein complex assembly, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009409 - response to cold, GO:0006412 - translation, GO:0003735 - structural constituent of ribosome, GO:0009408 - response to heat, GO:0009414 - response to water deprivation, GO:0003723 - RNA binding","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0002657 - oxidative stress, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance","PO:0020103 - flag leaf , PO:0009005 - root , PO:0009006 - shoot system , PO:0020031 - radicle , PO:0009009 - plant embryo ","Os11g0433900","LOC_Os11g24610.1"]
[{"$nulls":30},"Os08g0427900",-1.1719822,{"$nulls":83},"SPLHM47","splHM47, HM47, OsPelo, OsPELO, PELO, LML1, OsLML1","SPOTTED-LEAF HM47","spotted-leaf HM47, OsPELOTA, PELOTA, lesion mimic leaf 1",4," Vegetative organ - Leaf,  Vegetative organ - Root,  Reproductive organ - Pollination, fertilization, fertility,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus, GO:0005783 - endoplasmic reticulum, GO:0006412 - translation, GO:0071025 - RNA surveillance, GO:0032790 - ribosome disassembly, GO:0070481 - nuclear-transcribed mRNA catabolic process, non-stop decay, GO:0070651 - nonfunctional rRNA decay, GO:0005886 - plasma membrane, GO:0050832 - defense response to fungus, GO:0060548 - negative regulation of cell death, GO:0009555 - pollen development, GO:0048366 - leaf development, GO:0005739 - mitochondrion, GO:0048364 - root development, GO:0005737 - cytoplasm, GO:0042742 - defense response to bacterium, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009648 - photoperiodism, GO:0010337 - regulation of salicylic acid metabolic process, GO:0010150 - leaf senescence, GO:0009416 - response to light stimulus, GO:0043022 - ribosome binding","TO:0000293 - chlorophyll-a content, TO:0000605 - hydrogen peroxide content, TO:0000063 - mimic response, TO:0000227 - root length, TO:0001012 - lateral root length, TO:0000421 - pollen fertility, TO:0000187 - anther color, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000180 - spikelet fertility, TO:0000074 - blast disease, TO:0000145 - internode length, TO:0000040 - panicle length, TO:0000339 - stem thickness, TO:0000447 - filled grain number, TO:0000734 - grain length, TO:0000592 - 1000-dehulled grain weight, TO:0000249 - leaf senescence, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content, TO:0000075 - light sensitivity, TO:0000432 - temperature response trait, TO:0000175 - bacterial blight disease resistance, TO:0002668 - jasmonic acid content, TO:0000326 - leaf color","PO:0009039 - glume , PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0001007 - pollen development stage , PO:0007520 - root development stage , PO:0001050 - leaf development stage , PO:0000026 - primary root tip , PO:0000025 - root tip , PO:0000293 - guard cell , PO:0020106 - leaf sheath auricle , PO:0020105 - ligule , PO:0009037 - lemma , PO:0009066 - anther , PO:0009073 - stigma , PO:0009053 - peduncle , PO:0025281 - pollen , PO:0020138 - leaf lamina vein , PO:0025034 - leaf , PO:0009005 - root ","Os04g0659900","LOC_Os04g56480.1, LOC_Os04g56480.2, LOC_Os04g56480.3"]
[{"$nulls":30},"Os01g0865100",-1.1733996,{"$nulls":83},"CCR3","OsCCR3","CINNAMOYL-COA REDUCTASE 3","Cinnamoyl-CoA reductase 3",10," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0009651 - response to salt stress, GO:0009411 - response to UV","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000074 - blast disease, TO:0000160 - UV light sensitivity",null,"Os10g0576900 ","LOC_Os10g42620.1"]
[{"$nulls":30},"Os09g0372100",-1.1752315,{"$nulls":83},"CCR11","OsCCR11","CINNAMOYL-COA REDUCTASE 11","Cinnamoyl-CoA reductase 11",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0003824 - catalytic activity, GO:0009414 - response to water deprivation, GO:0050662 - coenzyme binding","TO:0000276 - drought tolerance",null,"Os02g0812000 ","LOC_Os02g56720.2"]
[{"$nulls":30},"Os09g0272200",-1.1775137,{"$nulls":83},"CCR24","OsCCR24","CINNAMOYL-COA REDUCTASE 24","Cinnamoyl-CoA reductase 24",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0003824 - catalytic activity, GO:0050662 - coenzyme binding, GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity, GO:0006694 - steroid biosynthetic process","TO:0000276 - drought tolerance",null,"Os09g0262000  ","LOC_Os09g08720.1"]
[{"$nulls":30},"Os02g0780600",-1.1785063,{"$nulls":83},"CCR35","OsCCR35","CINNAMOYL-COA REDUCTASE 35","Cinnamoyl-CoA reductase 35",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,null,"LOC_Os09g31522"]
[{"$nulls":30},"Os05g0583551",-1.1795226,{"$nulls":83},"MMP1 ","OsMMP1","MATRIX METALLOPROTEINASE 1","Matrix metalloproteinase 1",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0031012 - extracellular matrix, GO:0008270 - zinc ion binding, GO:0005886 - plasma membrane, GO:0004222 - metalloendopeptidase activity, GO:0006979 - response to oxidative stress, GO:0042545 - cell wall modification","TO:0000357 - growth and development trait, TO:0002657 - oxidative stress",null,"Os02g0740700","LOC_Os02g50730.1"]
[{"$nulls":30},"Os08g0390000",-1.18,{"$nulls":83},"GGC2","OsGGC2","_","G gamma subunit GGC2",8," Vegetative organ - Culm,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009409 - response to cold, GO:0009651 - response to salt stress","TO:0000397 - grain size, TO:0000207 - plant height, TO:0000734 - grain length, TO:0000567 - tiller angle, TO:0000303 - cold tolerance, TO:0000455 - seed set percent, TO:0006001 - salt tolerance, TO:0000346 - tiller number",null,"Os08g0456600"]
[{"$nulls":30},"Os08g0162400",-1.1818004,{"$nulls":83},"PSL1","OsPGL13, PGL13, OsPSL1, OsPG1, PG1, LTN-212","PHOTO-SENSITIVE LEAF ROLLING 1","Polygalacturonases-Like 13, PG-like 13, leaf tip necrosis 212, Polygalacturonase 1",1," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Seed - Morphological traits - Grain shape,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0004650 - polygalacturonase activity, GO:0005576 - extracellular region, GO:0005975 - carbohydrate metabolic process, GO:0070265 - necrotic cell death, GO:0009414 - response to water deprivation, GO:0052386 - cell wall thickening, GO:0045490 - pectin catabolic process, GO:0009642 - response to light intensity, GO:0006970 - response to osmotic stress, GO:0042742 - defense response to bacterium","TO:0000175 - bacterial blight disease resistance, TO:0000040 - panicle length, TO:0000605 - hydrogen peroxide content, TO:0000075 - light sensitivity, TO:0000316 - photosynthetic ability, TO:0000085 - leaf rolling, TO:0000276 - drought tolerance, TO:0000441 - humidity related trait, TO:0000095 - osmotic response sensitivity, TO:0000207 - plant height, TO:0000592 - 1000-dehulled grain weight, TO:0000734 - grain length",null,"Os01g0296200","LOC_Os01g19170.1"]
[{"$nulls":30},"Os05g0509900",-1.1832862,{"$nulls":83},"BPH34","Bph34","BROWN PLANTHOPPER RESISTANCE 34","BPH resistance 34",4," Tolerance and resistance - Insect resistance","GO:0009625 - response to insect","TO:0000424 - brown planthopper resistance"]
[{"$nulls":30},"Os08g0407200",-1.1862564,{"$nulls":83},"LCD","OsLCD","LOW CADMIUM","Low cadmium, low Cd",1," Tolerance and resistance - Stress tolerance","GO:0015691 - cadmium ion transport, GO:0005634 - nucleus, GO:0046686 - response to cadmium ion, GO:0005737 - cytoplasm",null,"PO:0009006 - shoot system , PO:0025034 - leaf , PO:0000071 - companion cell , PO:0009015 - portion of vascular tissue , PO:0009005 - root ","Os01g0956700","LOC_Os01g72670.4, LOC_Os01g72670.3, LOC_Os01g72670.2, LOC_Os01g72670.1"]
[{"$nulls":30},"Os01g0355500",-1.18692,{"$nulls":83},"MORF8","OsMORF8, OsMORF8b, MORF8b, OsMORF8-2, MORF8-2","MULTIPLE ORGANELLAR RNA EDITING FACTOR 8","multiple organellar RNA editing factor 8",9," Tolerance and resistance - Stress tolerance","GO:0016554 - cytidine to uridine editing, GO:0005739 - mitochondrion, GO:0009651 - response to salt stress, GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0006001 - salt tolerance","PO:0025034 - leaf ","Os09g0509000","LOC_Os09g33480.1"]
[{"$nulls":30},"Os01g0779300",-1.1889962,{"$nulls":83},"ALBA6","OsAlba6, Alba6","ACETYLATION LOWERS BINDING AFFINITY 6","acetylation lowers binding affinity protein 6, acetylation lowers binding affinity 6, Alba family protein 6",6," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0003676 - nucleic acid binding","TO:0000276 - drought tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance","PO:0020103 - flag leaf ","Os06g0602600 ","LOC_Os06g40040.1, LOC_Os06g40040.2"]
[{"$nulls":30},"Os04g0372201",-1.1908492,{"$nulls":83},"UPS1","OsUPS1","UREIDE PERMEASE 1","ureide permease1",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005886 - plasma membrane, GO:0019428 - allantoin biosynthetic process, GO:0042451 - purine nucleoside biosynthetic process, GO:0060359 - response to ammonium ion, GO:0022857 - transmembrane transporter activity, GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0015505 - uracil:cation symporter activity, GO:0005274 - allantoin uptake transmembrane transporter activity","TO:0000011 - nitrogen sensitivity","PO:0009015 - portion of vascular tissue ","Os12g0503000","LOC_Os12g31860.6, LOC_Os12g31860.1, LOC_Os12g31860.2, LOC_Os12g31860.3, LOC_Os12g31860.4, LOC_Os12g31860.5"]
[{"$nulls":30},"Os07g0187300",-1.1921543,{"$nulls":83},"SDS1","OsSDS1","SPL11 CELL-DEATH SUPPRESSOR 1","SPL11 cell-death suppressor 1",null," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium","TO:0000063 - mimic response, TO:0000074 - blast disease, TO:0000203 - bacterial leaf streak disease resistance, TO:0000605 - hydrogen peroxide content"]
[{"$nulls":30},"Os02g0235900",-1.1934915,{"$nulls":83},"WNK6","OsWNK6","WITH NO LYSINE KINASE 6","With No Lysine kinase 6, WNK protein kinase 6, WNK kinase 6",11," Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009408 - response to heat, GO:0005524 - ATP binding","TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0006001 - salt tolerance",null,"Os11g0160300","LOC_Os11g06140.1"]
[{"$nulls":30},"Os05g0104100",-1.194986,{"$nulls":83},"_",null,"_",null,1," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os01g0944100","LOC_Os01g71624.1, LOC_Os01g71624.2, LOC_Os01g71624.3, LOC_Os01g71624.4, LOC_Os01g71624.5"]
[{"$nulls":30},"Os05g0364300",-1.1967889,{"$nulls":83},"FTSH6","OsFtsH6, FtsH6","_",null,6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010304 - PSII associated light-harvesting complex II catabolic process, GO:0009414 - response to water deprivation, GO:0004176 - ATP-dependent peptidase activity, GO:0008237 - metallopeptidase activity, GO:0010205 - photoinhibition, GO:0010206 - photosystem II repair, GO:0006508 - proteolysis, GO:0010027 - thylakoid membrane organization, GO:0009941 - chloroplast envelope, GO:0009535 - chloroplast thylakoid membrane, GO:0004222 - metalloendopeptidase activity, GO:0005524 - ATP binding","TO:0000276 - drought tolerance",null,"Os06g0229000","LOC_Os06g12370.1"]
[{"$nulls":30},"Os03g0190000",-1.1982632,{"$nulls":83},"_",null,"_",null,8," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os08g0110600","LOC_Os08g01910.1"]
[{"$nulls":30},"Os11g0634500",-1.1988792,{"$nulls":83},"_",null,"_","Protein kinase, catalytic domain containing protein",1," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0016021 - integral to membrane","TO:0000276 - drought tolerance",null,"Os01g0117600","LOC_Os01g02830.1"]
[{"$nulls":30},"Os08g0139000",-1.1998209,{"$nulls":83},"_",null,"_",null,3," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os03g0826800","LOC_Os03g61150.1, LOC_Os03g61150.2, LOC_Os03g61150.3"]
[{"$nulls":30},"Os02g0550400",-1.202703,{"$nulls":83},"_",null,"_",null,7," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os07g0190600"]
[{"$nulls":30},"Os06g0603400",-1.2031876,{"$nulls":83},"_",null,"_",null,12," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os12g0266000","LOC_Os12g16524.1, LOC_Os12g16524.2, LOC_Os12g16524.3"]
[{"$nulls":30},"Os02g0679200",-1.205558,{"$nulls":83},"GATA16","OsGATA16, OsGNC, GNC","GATA TRANSCRIPTION FACTOR 16","GATA transcription factor 16, GATA factor 16, \\GATA, NITRATE-INDUCIBLE, CARBON-METABOLISM INVOLVED\\\"\"",6," Tolerance and resistance - Stress tolerance,  Other","GO:0003682 - chromatin binding, GO:0006366 - transcription from RNA polymerase II promoter, GO:0005667 - transcription factor complex, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0030154 - cell differentiation, GO:0005634 - nucleus, GO:0008270 - zinc ion binding","TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance",null,"Os06g0571800","LOC_Os06g37450.1"]
[{"$nulls":30},"Os01g0148700",-1.2060848,{"$nulls":83},"_","OsRePRP1.2, RePRP1.2","_","REPETITIVE PROLINE-RICH PROTEIN 1.2",5," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0009738 - abscisic acid mediated signaling, GO:0048364 - root development, GO:0051511 - negative regulation of unidimensional cell growth, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane, GO:0030247 - polysaccharide binding","TO:0000656 - root development trait, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000227 - root length, TO:0000306 - root thickness","PO:0009047 - stem , PO:0020104 - leaf sheath , PO:0009049 - inflorescence , PO:0007520 - root development stage , PO:0001031 - 4 root elongation stage ","Os05g0227600","LOC_Os05g13940.1"]
[{"$nulls":30},"Os01g0612600",-1.2070856,{"$nulls":83},"PLS4","OsPLS4","PREMATURE LEAF SENESCENCE 4","3-Oxoacyl-[acyl-carrier-protein] reductase, Premature Leaf Senescence 4",4," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0009507 - chloroplast, GO:0009409 - response to cold, GO:0016491 - oxidoreductase activity, GO:0010150 - leaf senescence, GO:0009658 - chloroplast organization, GO:0010025 - wax biosynthetic process, GO:0006633 - fatty acid biosynthetic process","TO:0000040 - panicle length, TO:0000447 - filled grain number, TO:0000455 - seed set percent, TO:0000303 - cold tolerance, TO:0000592 - 1000-dehulled grain weight, TO:0001027 - net photosynthetic rate, TO:0000346 - tiller number, TO:0000326 - leaf color, TO:0000207 - plant height, TO:0000495 - chlorophyll content, TO:0002715 - chloroplast development trait, TO:0000249 - leaf senescence, TO:0000605 - hydrogen peroxide content","PO:0009047 - stem , PO:0009005 - root , PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os04g0376300","LOC_Os04g30760.1"]
[{"$nulls":30},"Os03g0787100",-1.2096041,{"$nulls":83},"STE3","ste3","_",null,1," Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance, TO:0000436 - spikelet sterility, TO:0000180 - spikelet fertility"]
[{"$nulls":30},"Os11g0498400",-1.2110487,{"$nulls":83},"_",null,"_","stem rot resistance gene",2," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000323 - stem rot disease resistance"]
[{"$nulls":30},"Os01g0721700",-1.2158912,{"$nulls":83},"_","OsNIT1, NIT1, OsNIT2, NIT2, OsNIT4B, NIT4B","_","nitrilase 1, NITRILASE1",2," Biochemical character,  Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0010167 - response to nitrate, GO:0006807 - nitrogen compound metabolic process, GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, GO:0009851 - auxin biosynthetic process, GO:0060359 - response to ammonium ion, GO:0009629 - response to gravity","TO:0000227 - root length, TO:0000011 - nitrogen sensitivity, TO:0001013 - lateral root number, TO:0002693 - gravity response trait",null,"Os02g0635000 ","LOC_Os02g42330.2, LOC_Os02g42330.1"]
[{"$nulls":30},"Os03g0115100",-1.2169706,{"$nulls":83},"_","OsDJ-1C, DJ-1C, OsDJ-1C.1, OsDJ-1C.2, OsDJ-1C.3","_","DJ-1/PfpI domain containing protein C, DJ-1 protein C",4," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0006979 - response to oxidative stress, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0019172 - glyoxalase III activity, GO:0019243 - methylglyoxal catabolic process to D-lactate, GO:0046685 - response to arsenic, GO:0046688 - response to copper ion, GO:0016798 - hydrolase activity, acting on glycosyl bonds, GO:0051595 - response to methylglyoxal, GO:0002238 - response to molecule of fungal origin","TO:0002657 - oxidative stress, TO:0000021 - copper sensitivity, TO:0000080 - micronutrient sensitivity, TO:0000439 - fungal disease resistance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance",null,"Os04g0671700 ","LOC_Os04g57590.1, LOC_Os04g57590.2, LOC_Os04g57590.3"]
[{"$nulls":30},"Os06g0327300",-1.2194057,{"$nulls":83},"_","OsRBD1, RBD1","_","RNA Binding Domain-Containing Protein 1, RNA binding domain 1-containing protein",12," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0051595 - response to methylglyoxal, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0009269 - response to desiccation, GO:0006979 - response to oxidative stress, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus, GO:0003676 - nucleic acid binding, GO:0000166 - nucleotide binding, GO:0009611 - response to wounding","TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0002657 - oxidative stress, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance",null,"Os12g0100100","LOC_Os12g01010.1"]
[{"$nulls":30},"Os02g0581000",-1.2205758,{"$nulls":83},"CEP12","OsCEP12, OsCEP7, CEP7","C-TERMINALLY ENCODED PEPTIDE 12","C-terminally encoded peptide 7",5," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0009409 - response to cold, GO:0046686 - response to cadmium ion","TO:0006001 - salt tolerance, TO:0000303 - cold tolerance","PO:0005052 - plant callus , PO:0009005 - root ","Os05g0205400  ","LOC_Os05g11580.1"]
[{"$nulls":30},"Os01g0229100",-1.2224373,{"$nulls":83},"SPL40","OsMed5_1, Med5_1","SPOTTED-LEAF 40","Mediator 5_1, spotted-leaf 40",5," Coloration - Chlorophyll,  Tolerance and resistance - Disease resistance","GO:0006952 - defense response, GO:0042742 - defense response to bacterium, GO:0043069 - negative regulation of programmed cell death, GO:0009416 - response to light stimulus, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009867 - jasmonic acid mediated signaling pathway","TO:0001027 - net photosynthetic rate, TO:0000074 - blast disease, TO:0000063 - mimic response, TO:0000112 - disease resistance, TO:0000075 - light sensitivity, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000522 - stomatal conductance, TO:0000496 - carotenoid content, TO:0000298 - chlorophyll ratio, TO:0000172 - jasmonic acid sensitivity, TO:0000316 - photosynthetic ability, TO:0001018 - transpiration rate",null,"Os05g0312000","LOC_Os05g24684.1"]
[{"$nulls":30},"Os06g0687700",-1.2228578,{"$nulls":83},"APIP10","OsAPIP10","AVRPIZ-T INTERACTING PROTEIN 10","AvrPiz-t Interacting Protein 10",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0008270 - zinc ion binding, GO:0004842 - ubiquitin-protein ligase activity, GO:0000151 - ubiquitin ligase complex, GO:0050832 - defense response to fungus, GO:0043130 - ubiquitin binding, GO:0016567 - protein ubiquitination","TO:0000074 - blast disease",null,"Os02g0182900 ","LOC_Os02g09060.2, LOC_Os02g09060.1"]
[{"$nulls":30},"Os01g0101300",-1.2246093,{"$nulls":83},"SAR1B","OsARL1f, ARL1f, OsSar1b, Sar1b","SECRETION-ASSOCIATED, RAS-RELATED PROTEIN 1B","ARF-like protein 1f, \\secretion-associated, Ras-related protein1b\\\"\"",12," Seed - Morphological traits,  Seed - Physiological traits - Dormancy,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0009737 - response to abscisic acid stimulus, GO:0009269 - response to desiccation, GO:0005783 - endoplasmic reticulum, GO:0005794 - Golgi apparatus, GO:0006886 - intracellular protein transport, GO:0007264 - small GTPase mediated signal transduction, GO:0009414 - response to water deprivation, GO:0005525 - GTP binding, GO:0009651 - response to salt stress, GO:0016192 - vesicle-mediated transport, GO:0048623 - seed germination on parent plant","TO:0000100 - shrunken endosperm, TO:0000490 - protein composition related trait, TO:0000104 - floury endosperm, TO:0002653 - endosperm storage protein content, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000202 - germination ratio, TO:0000390 - grain core percent white",null,"Os12g0560300 ","LOC_Os12g37360.1"]
[{"$nulls":30},"Os06g0564300",-1.2261825,{"$nulls":83},"_","OsRFP","_","RING finger protein",8," Tolerance and resistance - Stress tolerance,  Other","GO:0046685 - response to arsenic, GO:0008270 - zinc ion binding",null,null,"Os08g0414200","LOC_Os08g31930.1"]
[{"$nulls":30},"Os03g0344300",-1.2273537,{"$nulls":83},"PI65","Pi65(t), Pi65","PYRICULARIA ORYZAE RESISTANCE 65","Magnaporthe grisea resistance-65, Blast resistance 65",11," Tolerance and resistance - Disease resistance","GO:0009620 - response to fungus","TO:0000074 - blast disease",null,"Os11g0694600","LOC_Os11g47180.1"]
[{"$nulls":30},"Os12g0105200",-1.2304631,{"$nulls":83},"NPC5","OsNPC6, OsNPC5, NPC6","NON-SPECIFIC PHOSPHOLIPASE C5","Non-specific phospholipase C5",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0016788 - hydrolase activity, acting on ester bonds, GO:0009414 - response to water deprivation","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance","PO:0009049 - inflorescence ","Os01g0102000","LOC_Os01g01190.1"]
[{"$nulls":30},"Os03g0231900",-1.232603,{"$nulls":83},"_","DEFL9, OsDEFL9, OsDf-09, Df-09","_","defensin-like 9",4," Tolerance and resistance","GO:0050832 - defense response to fungus, GO:0031640 - killing of cells of another organism",null,null,"Os04g0189400","LOC_Os04g11130.1"]
[{"$nulls":30},"Os03g0147900",-1.2340194,{"$nulls":83},"_","OsSIRP1, SIRP1, DLN148, OsDLN148","_","salt-induced RING Finger Protein 1, DLN repressor 148, DLN motif protein 148",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0042787 - protein ubiquitination during ubiquitin-dependent protein catabolic process, GO:0000209 - protein polyubiquitination, GO:0008270 - zinc ion binding, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os05g0488800","LOC_Os05g40980.2, LOC_Os05g40980.1"]
[{"$nulls":30},"Os05g0482700",-1.234806,{"$nulls":83},"_","OsRFP","_","RING Finger Protein",6," Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress","TO:0006001 - salt tolerance"]
[{"$nulls":30},"Os01g0170800",-1.2355596,{"$nulls":83},"HDAC6","OsHDAC6, OsHDA706, HDA706","HISTONE DEACETYLASE 6","histone deacetylase 6",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009753 - response to jasmonic acid stimulus, GO:0016787 - hydrolase activity, GO:0009507 - chloroplast, GO:0009628 - response to abiotic stimulus, GO:0009413 - response to flooding, GO:0006970 - response to osmotic stress","TO:0000168 - abiotic stress trait, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0000102 - phosphorus sensitivity",null,"Os06g0571100","LOC_Os06g37420.1, LOC_Os06g37420.2"]
[{"$nulls":30},"Os01g0271500",-1.2380595,{"$nulls":83},"_","OsRFP, RLIM, OsRLIM","_","RING finger protein, E3 ubiquitin-protein ligase RLIM",5," Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0043161 - proteasomal ubiquitin-dependent protein catabolic process, GO:0008270 - zinc ion binding",null,null,"Os05g0389600","LOC_Os05g32350.1"]
[{"$nulls":30},"Os01g0158400",-1.2404841,{"$nulls":83},"SADR1","OsRFP, OsSADR1","SALT, ABA AND DROUGHT STRESS-INDUCED RING FINGER PROTEIN 1","RING finger protein, \\Salt-, ABA- and Drought-Induced RING Finger Protein 1\\\", \\\"salt, ABA and drought stress-induced RING finger protein 1\\\"\"",11," Tolerance and resistance - Stress tolerance","GO:0005829 - cytosol, GO:0009651 - response to salt stress, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0004842 - ubiquitin-protein ligase activity, GO:0006511 - ubiquitin-dependent protein catabolic process, GO:0010118 - stomatal movement, GO:0008270 - zinc ion binding, GO:0007093 - mitotic cell cycle checkpoint, GO:0009414 - response to water deprivation","TO:0000615 - abscisic acid sensitivity, TO:0000227 - root length, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os11g0175500","LOC_Os11g07450.1, LOC_Os11g07450.2"]
[{"$nulls":30},"Os03g0194500",-1.2421526,{"$nulls":83},"_","OsNAPL6, NAPL6","_",null,2," Tolerance and resistance - Stress tolerance","GO:0006974 - response to DNA damage stimulus, GO:0006334 - nucleosome assembly, GO:0009651 - response to salt stress, GO:0005737 - cytoplasm, GO:0006970 - response to osmotic stress, GO:0005634 - nucleus","TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance",null,"Os02g0576700","LOC_Os02g36710.1"]
[{"$nulls":30},"Os05g0241000",-1.2451094,{"$nulls":83},"_","OsM12, M12, OsM12a","_","single domain MDC protein 12, single MATH domain containing protein 12",12," Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009607 - response to biotic stimulus, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000179 - biotic stress trait",null,"Os12g0597200","LOC_Os12g40520.1"]
[{"$nulls":30},"Os07g0524100",-1.2456168,{"$nulls":83},"_","OsMB5, MB5, OsMB5a, OsMB5b","_","MATH-BTB protein 5, MDC protein with a BTB domain 5, MDC protein having BTB domain 5",3," Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009607 - response to biotic stimulus, GO:0009651 - response to salt stress, GO:0005634 - nucleus","TO:0000179 - biotic stress trait, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os03g0792500","LOC_Os03g57854.1, LOC_Os03g57854.2"]
[{"$nulls":30},"Os11g0244100",-1.2463627,{"$nulls":83},"_","OsMB12, MB12","_","MATH-BTB protein 12, MDC protein with a BTB domain 12, MDC protein having BTB domain 12",8," Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os08g0406600","LOC_Os08g31430.1"]
[{"$nulls":30},"Os02g0103700",-1.2494901,{"$nulls":83},"FAH1","Os-FAH1, OsFAH1","FATTY ACID 2-HYDROXYLASE 1","fatty acid 2-hydroxylase 1",12," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0016021 - integral to membrane, GO:0005506 - iron ion binding, GO:0005783 - endoplasmic reticulum, GO:0006631 - fatty acid metabolic process, GO:0006633 - fatty acid biosynthetic process, GO:0006665 - sphingolipid metabolic process, GO:0050832 - defense response to fungus, GO:0080132 - fatty acid alpha-hydroxylase activity","TO:0000074 - blast disease",null,"Os12g0628400 ","LOC_Os12g43363.1, LOC_Os12g43363.2, LOC_Os12g43363.3"]
[{"$nulls":30},"Os07g0173700",-1.2497902,{"$nulls":83},"_","Os2OG-Fe (II) oxy, 2OG-Fe (II) oxy","_","2OG-Fe (II) oxygenase domain containing protein, 2OG-Fe (II) oxygenase family protein",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0006950 - response to stress, GO:0051213 - dioxygenase activity","TO:0000164 - stress trait",null,"Os01g0830500","LOC_Os01g61440.1"]
[{"$nulls":30},"Os02g0636400",-1.252271,{"$nulls":83},"WP2","TRXZ, OsPAP10, PAP10, OsPAP10/OsTRXz, OsTRXz, TRXz","WHITE PANICLE 2","PEP-associated protein 10, plastid-encoded plastid polymerase-associated protein 10, plastidic thioredoxin Z, THIOREDOXINZ, thioredoxin Z, white panicle2",8," Reproductive organ - panicle,  Coloration - Chlorophyll,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0006662 - glycerol ether metabolic process, GO:0009507 - chloroplast, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009579 - thylakoid, GO:0009657 - plastid organization, GO:0009658 - chloroplast organization, GO:0015035 - protein disulfide oxidoreductase activity, GO:0016671 - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor, GO:0031347 - regulation of defense response, GO:0034051 - negative regulation of plant-type hypersensitive response, GO:0034599 - cellular response to oxidative stress, GO:0045454 - cell redox homeostasis, GO:0047134 - protein-disulfide reductase activity, GO:0009408 - response to heat, GO:0009295 - nucleoid, GO:0042793 - transcription from plastid promoter, GO:0005737 - cytoplasm, GO:0006952 - defense response, GO:0008219 - cell death, GO:0004791 - thioredoxin-disulfide reductase activity","TO:0000326 - leaf color, TO:0000259 - heat tolerance, TO:0000201 - panicle color, TO:0002715 - chloroplast development trait, TO:0000293 - chlorophyll-a content, TO:0000295 - chlorophyll-b content, TO:0000496 - carotenoid content","PO:0025034 - leaf , PO:0009047 - stem , PO:0020104 - leaf sheath ","Os08g0378900","LOC_Os08g29110.2, LOC_Os08g29110.1"]
[{"$nulls":30},"Os01g0589200",-1.2546716,{"$nulls":83},"PT16","OsPT16","POSPHATE TRANSPORTER 16","phosphate transporter 16",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005789 - endoplasmic reticulum membrane, GO:0003735 - structural constituent of ribosome, GO:0006412 - translation, GO:0006810 - transport, GO:0016036 - cellular response to phosphate starvation, GO:0016021 - integral to membrane","TO:0000102 - phosphorus sensitivity",null,"Os03g0263400","LOC_Os03g15690.1, LOC_Os03g15690.2"]
[{"$nulls":30},"Os06g0166400",-1.2550154,{"$nulls":83},"GLP2-1","OsGLP2-1","GERMIN-LIKE PROTEIN 2-1","Germin-like protein 2-1",2," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0048046 - apoplast, GO:0033609 - oxalate metabolic process, GO:0030145 - manganese ion binding, GO:0046564 - oxalate decarboxylase activity, GO:0005618 - cell wall, GO:0010162 - seed dormancy, GO:0045735 - nutrient reservoir activity, GO:0009739 - response to gibberellin stimulus, GO:0005829 - cytosol, GO:0009740 - gibberellic acid mediated signaling, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0005634 - nucleus","TO:0000166 - gibberellic acid sensitivity, TO:0000074 - blast disease, TO:0000615 - abscisic acid sensitivity","PO:0025374 - seed dormant stage , PO:0020110 - scutellum ","Os02g0491600","LOC_Os02g29000.1"]
[{"$nulls":30},"Os03g0755000",-1.2580667,{"$nulls":83},"_",null,"_","deoxyribodipyrimidine photolyase protein-like family protein",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016787 - hydrolase activity, GO:0010224 - response to UV-B, GO:0016829 - lyase activity","TO:0000601 - UV-B light sensitivity",null,"Os09g0532700  ","LOC_Os09g36240.1, LOC_Os09g36240.2, LOC_Os09g36240.3, LOC_Os09g36240.4"]
[{"$nulls":30},"Os03g0310500",-1.259627,{"$nulls":83},"CDS5","OsCDS5, OsVTE5, VTE5","CYTIDINEDIPHOSPHATE-DIACYLGLYCEROL SYNTHASE 5","Cytidinediphosphate-diacylglycerol synthase 5, phytol kinase, VITAMIN E 5",1," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0016301 - kinase activity, GO:0010148 - transpiration, GO:0009414 - response to water deprivation, GO:0010027 - thylakoid membrane organization, GO:0009658 - chloroplast organization, GO:0006970 - response to osmotic stress, GO:0055091 - phospholipid homeostasis, GO:0010189 - vitamin E biosynthetic process","TO:0000326 - leaf color, TO:0000095 - osmotic response sensitivity, TO:0000295 - chlorophyll-b content, TO:0000293 - chlorophyll-a content, TO:0000075 - light sensitivity, TO:0000276 - drought tolerance, TO:0002715 - chloroplast development trait",null,"Os01g0832000","LOC_Os01g61560.1, LOC_Os01g61560.2, LOC_Os01g61560.3"]
[{"$nulls":30},"Os05g0501700",-1.260571,{"$nulls":83},"ART2","OsART2","ALUMINIUM RESISTANCE TRANSCRIPTION FACTOR 2","Al resistance transcription factor 2",4," Tolerance and resistance - Stress tolerance,  Other","GO:0003700 - transcription factor activity, GO:0003676 - nucleic acid binding, GO:0010044 - response to aluminum ion, GO:0005634 - nucleus","TO:0000354 - aluminum sensitivity","PO:0009005 - root ","Os04g0165200","LOC_Os04g08290.1"]
[{"$nulls":30},"Os02g0572900",-1.2639445,{"$nulls":83},"2ODD11","OsODD11, ODD11, 2-ODD11, Os2-ODD11, 2ODD11, Os2ODD11, M3H, OsM3H","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 11","2-oxoglutarate-dependent dioxygenase 11",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0051213 - dioxygenase activity, GO:0009646 - response to absence of light, GO:0007623 - circadian rhythm, GO:0046872 - metal ion binding","TO:0000075 - light sensitivity",null,"Os10g0558700","LOC_Os10g40934.9, LOC_Os10g40934.3, LOC_Os10g40934.2, LOC_Os10g40934.12, LOC_Os10g40934.11, LOC_Os10g40934.10, LOC_Os10g40934.1"]
[{"$nulls":30},"Os10g0466000",-1.2648153,{"$nulls":83},"GAS2","OsGAS2","_","glucosidase II beta subunit, glucosidase II b subunit",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009651 - response to salt stress, GO:0034976 - response to endoplasmic reticulum stress, GO:0042742 - defense response to bacterium, GO:0006491 - N-glycan processing, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0043067 - regulation of programmed cell death, GO:0005783 - endoplasmic reticulum, GO:0010506 - regulation of autophagy","TO:0000095 - osmotic response sensitivity, TO:0006001 - salt tolerance, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance",null,"Os01g0276800","LOC_Os01g16970.1, LOC_Os01g16970.2, LOC_Os01g16970.3"]
[{"$nulls":30},"Os02g0719100",-1.2673501,{"$nulls":83},"DUA1","OsDUA1","_",null,9," Tolerance and resistance - Stress tolerance","GO:0008270 - zinc ion binding, GO:0009409 - response to cold, GO:0009658 - chloroplast organization, GO:0009451 - RNA modification","TO:0000303 - cold tolerance, TO:0002715 - chloroplast development trait",null,"Os09g0474051","LOC_Os09g29825.1"]
[{"$nulls":30},"Os01g0842200",-1.2700797,{"$nulls":83},"2ODD13","2-ODD13, Os2-ODD13, Os2ODD13, OsHSL1, HSL1","2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 13","2-oxoglutarate-dependent dioxygenase 13, HIS1-like gene 1",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009635 - response to herbicide, GO:0046872 - metal ion binding, GO:0051213 - dioxygenase activity","TO:0000058 - herbicide sensitivity","PO:0025034 - leaf ","Os06g0176700|Os06g0178500","LOC_Os06g07932.2, LOC_Os06g07932.1, LOC_Os06g08032.1"]
[{"$nulls":30},"Os01g0549200",-1.2704529,{"$nulls":83},"_",null,"_","cytochrome P450, cytochrome P450 76M5-like",8," Biochemical character,  Coloration - Anthocyanin,  Tolerance and resistance - Stress tolerance","GO:0005506 - iron ion binding, GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, GO:0016020 - membrane, GO:0009813 - flavonoid biosynthetic process, GO:0009651 - response to salt stress, GO:0020037 - heme binding","TO:0006001 - salt tolerance",null,"Os08g0547900","LOC_Os08g43440.1"]
[{"$nulls":30},"Os03g0757600",-1.2731913,{"$nulls":83},"EPF1","OsEPF1","EPIDERMAL PATTERNING FACTOR 1","epidermal patterning factor 1",4," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0010618 - aerenchyma formation, GO:0010015 - root morphogenesis, GO:0010052 - guard cell differentiation, GO:0010374 - stomatal complex development, GO:0009408 - response to heat, GO:0009414 - response to water deprivation","TO:0000566 - stomatal frequency, TO:0000276 - drought tolerance, TO:0001017 - water use efficiency, TO:0000259 - heat tolerance, TO:0000522 - stomatal conductance",null,"Os04g0637300","LOC_Os04g54490.1"]
[{"$nulls":30},"Os02g0167700",-1.2745194,{"$nulls":83},"SUN1","OsSUN1, OsSUN2, SUN2","SUN DOMAIN-CONTAINING PROTEIN 1","SUN (Sad1/UNC-84) domain-containing protein 1, SUN domain-containing protein 1, SUN protein 1, SUN Domain Protein 2",1," Reproductive organ - Pollination, fertilization, fertility - Female sterility,  Tolerance and resistance - Stress tolerance","GO:0043495 - protein anchor, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0051321 - meiotic cell cycle, GO:0045141 - meiotic telomere clustering, GO:0009408 - response to heat, GO:0007129 - synapsis, GO:0005635 - nuclear envelope, GO:0006998 - nuclear envelope organization","TO:0000259 - heat tolerance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os01g0267600","LOC_Os01g16220.1"]
[{"$nulls":30},"Os03g0133900",-1.2762641,{"$nulls":83},"_",null,"_",null,1," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004801 - transaldolase activity, GO:0046686 - response to cadmium ion, GO:0006098 - pentose-phosphate shunt, GO:0009809 - lignin biosynthetic process, GO:0005975 - carbohydrate metabolic process, GO:0009570 - chloroplast stroma, GO:0005739 - mitochondrion, GO:0033587 - shikimate biosynthetic process, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os01g0926300 ","LOC_Os01g70170.1"]
[{"$nulls":30},"Os02g0168600",-1.2787343,{"$nulls":83},"SRP32","Os-SR32, OsSR32, SR32, OsSRp32, Os-SRp32","SERINE/ARGININE-RICH PROTEIN 32","Serine/Arginine-Rich Protein Splicing Factor 32, Serine/Arginine-Rich Protein 32, SR Protein 32, SR subfamily protein 32",3," Tolerance and resistance - Stress tolerance","GO:0003723 - RNA binding, GO:0005634 - nucleus, GO:0000381 - regulation of alternative nuclear mRNA splicing, via spliceosome, GO:0042594 - response to starvation, GO:0016607 - nuclear speck, GO:0045292 - nuclear mRNA cis splicing, via spliceosome",null,null,"Os03g0344100","LOC_Os03g22380.1, LOC_Os03g22380.2, LOC_Os03g22380.3"]
[{"$nulls":30},"Os03g0730800",-1.279359,{"$nulls":83},"RSZP21B","Os-RSZ21, OsRSZ21, RSZ21, Os-RSZp21b, OsRSZp21b","_","RS domain with zinc knuckle protein 21B, RSZ subfamily protein 21B",2," Tolerance and resistance - Stress tolerance","GO:0003723 - RNA binding, GO:0016607 - nuclear speck, GO:0005634 - nucleus, GO:0008270 - zinc ion binding, GO:0042594 - response to starvation, GO:0000381 - regulation of alternative nuclear mRNA splicing, via spliceosome, GO:0045292 - nuclear mRNA cis splicing, via spliceosome",null,null,"Os02g0789400","LOC_Os02g54770.1, LOC_Os02g54770.2"]
[{"$nulls":30},"Os01g0582600",-1.2836003,{"$nulls":83},"SCL57","Os-SCL57, OsSCL57","SC35-LIKE PROTEIN 57","SC35-like protein 57, SCL subfamily protein 57",11," Tolerance and resistance - Stress tolerance","GO:0016607 - nuclear speck, GO:0005634 - nucleus, GO:0000381 - regulation of alternative nuclear mRNA splicing, via spliceosome, GO:0045292 - nuclear mRNA cis splicing, via spliceosome, GO:0003723 - RNA binding, GO:0055062 - phosphate ion homeostasis, GO:0042594 - response to starvation",null,null,"Os11g0704700","LOC_Os11g47830.1, LOC_Os11g47830.2"]
[{"$nulls":30},"Os01g0768700",-1.2851192,{"$nulls":83},"_",null,"_","leucine-rich repeat (LRR)-containing protein",1," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os02g0138000","LOC_Os02g04540.1"]
[{"$nulls":30},"Os12g0183100",-1.2863866,{"$nulls":83},"_",null,"_",null,10," Tolerance and resistance - Stress tolerance","GO:0048193 - Golgi vesicle transport, GO:0016021 - integral to membrane, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os10g0343100","LOC_Os10g20240.1"]
[{"$nulls":30},"Os02g0782100",-1.2892442,{"$nulls":83},"VWR","OsVWR","VERTICILLIUM WILT RESISTANCE","Verticillium wilt resistance, Verticillium wilt resistance protein",4," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect, GO:0016021 - integral to membrane","TO:0000424 - brown planthopper resistance",null,"Os04g0349700","LOC_Os04g28210.1"]
[{"$nulls":30},"Os01g0723200",-1.2907261,{"$nulls":83},"DIRP1","OsDIRP1","DROUGHT-INDUCED RING PROTEIN 1","Drought-Induced RING Protein 1",6," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance",null,"Os06g0687300","LOC_Os06g47280.1"]
[{"$nulls":30},"Os06g0607800",-1.2917299,{"$nulls":83},"MSL27","OsMSL27","MYB/SANT-LIKE 27","Myb/SANT-LIKE 27",7," Tolerance and resistance - Stress tolerance","GO:0009642 - response to light intensity, GO:0009651 - response to salt stress, GO:0009507 - chloroplast, GO:0009737 - response to abscisic acid stimulus, GO:0042542 - response to hydrogen peroxide, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000460 - light intensity sensitivity","PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os07g0115800","LOC_Os07g02500.1"]
[{"$nulls":30},"Os11g0125601",-1.2918954,{"$nulls":83},"MSL28","OsMSL28","MYB/SANT-LIKE 28","Myb/SANT-LIKE 28",7," Tolerance and resistance - Stress tolerance","GO:0009507 - chloroplast, GO:0009737 - response to abscisic acid stimulus, GO:0042542 - response to hydrogen peroxide, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009642 - response to light intensity","TO:0000460 - light intensity sensitivity, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance","PO:0025034 - leaf , PO:0020104 - leaf sheath ","Os07g0210800","LOC_Os07g10950.1"]
[{"$nulls":30},"Os07g0115720",-1.2932991,{"$nulls":83},"MSL41","OsMSL41","MYB/SANT-LIKE 41","Myb/SANT-LIKE 41",12," Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0005634 - nucleus, GO:0009737 - response to abscisic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009642 - response to light intensity","TO:0000615 - abscisic acid sensitivity, TO:0000460 - light intensity sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance","PO:0020104 - leaf sheath , PO:0025034 - leaf ","Os12g0207200","LOC_Os12g10550.1"]
[{"$nulls":30},"Os07g0681100",-1.2951714,{"$nulls":83},"GS1 ","OsGS1, OsGS2, OsGSH2","GLUTATHIONE SYNTHETASE 1","glutathione synthetase 1",11," Tolerance and resistance - Stress tolerance","GO:0046685 - response to arsenic, GO:0005829 - cytosol, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0043295 - glutathione binding, GO:0004363 - glutathione synthase activity, GO:0000287 - magnesium ion binding, GO:0042803 - protein homodimerization activity","TO:0000303 - cold tolerance","PO:0009006 - shoot system ","Os11g0642800","LOC_Os11g42350.1, LOC_Os11g42350.2, LOC_Os11g42350.3"]
[{"$nulls":30},"Os04g0206700",-1.2966986,{"$nulls":83},"HAN1","OsHAN1, OsCYP94B4, CYP94B4","CYTOCHROME P450 94B4","Cytochrome P450 94B4",11," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005506 - iron ion binding, GO:0009867 - jasmonic acid mediated signaling pathway, GO:0005783 - endoplasmic reticulum, GO:0020037 - heme binding, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0009409 - response to cold, GO:0009611 - response to wounding","TO:0000303 - cold tolerance","PO:0000003 - whole plant ","Os11g0483000","LOC_Os11g29290.1"]
[{"$nulls":30},"Os08g0532400",-1.2981648,{"$nulls":83},"_","KCS","_","3-ketoacyl-CoA synthase",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0009651 - response to salt stress, GO:0006633 - fatty acid biosynthetic process, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups","TO:0006001 - salt tolerance",null,"Os02g0813600","LOC_Os02g56860.1"]
[{"$nulls":30},"Os04g0651700",-1.3015851,{"$nulls":83},"_","FBP","_","fructose bisphosphate aldolase",9," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,null,"LOC_Os09g02540.1"]
[{"$nulls":30},"Os09g0521500",-1.3055725,{"$nulls":83},"MDH1","OsMDH1","MALATE DEHYDROGENASE 1","Malate dehydrogenase 1",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0006099 - tricarboxylic acid cycle, GO:0006108 - malate metabolic process, GO:0005975 - carbohydrate metabolic process, GO:0009651 - response to salt stress, GO:0030060 - L-malate dehydrogenase activity, GO:0009507 - chloroplast, GO:0005739 - mitochondrion","TO:0006001 - salt tolerance","PO:0025034 - leaf , PO:0020104 - leaf sheath , PO:0009039 - glume , PO:0009005 - root , PO:0009047 - stem , PO:0000055 - bud ","Os01g0829800","LOC_Os01g61380.1"]
[{"$nulls":30},"Os09g0499600",-1.3083459,{"$nulls":83},"CYP94D11","OsCYP94D11, OsCYPq1, CYPq1","CYTOCHROME P450 94D11","Cytochrome P450 94D11",1," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0004497 - monooxygenase activity, GO:0005506 - iron ion binding, GO:0020037 - heme binding, GO:0009611 - response to wounding, GO:0009686 - gibberellin biosynthetic process, GO:0016021 - integral to membrane","TO:0000145 - internode length",null,"Os01g0803900","LOC_Os01g58970.1"]
[{"$nulls":30},"Os02g0474700",-1.3115946,{"$nulls":83},"AH3","OsAH3","AMIDOHYDROLASE 3","amidohydrolase 3",7," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0010179 - IAA-Ala conjugate hydrolase activity, GO:0009850 - auxin metabolic process, GO:0005783 - endoplasmic reticulum, GO:0009611 - response to wounding, GO:0016787 - hydrolase activity",null,null,"Os07g0249900","LOC_Os07g14610.1"]
[{"$nulls":30},"Os12g0270100",-1.3134279,{"$nulls":83},"SF3B1","OsSF3B1, SGR","_","core splicing factor SF3B1, SF3B1-GEX1A-Resistant",2," Tolerance and resistance - Stress tolerance","GO:0003729 - mRNA binding, GO:0010188 - response to microbial phytotoxin, GO:0000245 - spliceosome assembly, GO:0005681 - spliceosomal complex, GO:0009651 - response to salt stress, GO:0043484 - regulation of RNA splicing, GO:0009635 - response to herbicide","TO:0000058 - herbicide sensitivity, TO:0006001 - salt tolerance",null,"Os02g0146400","LOC_Os02g05310.4, LOC_Os02g05310.3, LOC_Os02g05310.2, LOC_Os02g05310.1"]
[{"$nulls":30},"Os09g0266400",-1.3165325,{"$nulls":83},"GATL2","OsGATL2","GALACTURONOSYLTRANSFERASE-LIKE 2","galacturonosyltransferase-like 2",3," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005794 - Golgi apparatus, GO:0016757 - transferase activity, transferring glycosyl groups, GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os03g0678800","LOC_Os03g47530.1"]
[{"$nulls":30},"Os04g0447650",-1.3189746,{"$nulls":83},"LBD5-3","OsLBD5-3","LBD-CONTAINING PROTEIN 5-3","lateral organ boundary domain-containing protein 5-3, LBD-containing protein 5-3",5," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0006995 - cellular response to nitrogen starvation, GO:0042594 - response to starvation, GO:0051365 - cellular response to potassium ion starvation, GO:0048364 - root development","TO:0000084 - root number, TO:0000656 - root development trait, TO:0000008 - potassium sensitivity, TO:0000011 - nitrogen sensitivity","PO:0009005 - root , PO:0007520 - root development stage ","Os05g0346800","LOC_Os05g27980.1"]
[{"$nulls":30},"Os01g0120800",-1.3194065,{"$nulls":83},"TCM12","OsTCM12, iPGAM, OsiPGAM","THERMO-SENSITIVE CHLOROSIS MUTANT 12","thermo-sensitive chlorosis mutant 12, \\2, 3-bisphosphoglycerate-independent phosphoglycerate mutase\\\"\"",12," Biochemical character,  Vegetative organ - Leaf,  Coloration - Chlorophyll,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0009409 - response to cold, GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, GO:0005634 - nucleus, GO:0009658 - chloroplast organization, GO:0015979 - photosynthesis, GO:0015995 - chlorophyll biosynthetic process","TO:0000293 - chlorophyll-a content, TO:0000496 - carotenoid content, TO:0000326 - leaf color, TO:0000303 - cold tolerance, TO:0000295 - chlorophyll-b content",null,"Os12g0536000","LOC_Os12g35040.1"]
[{"$nulls":30},"Os01g0850000",-1.3199749,{"$nulls":83},"CASP1","OsCASP1","CASPARIAN STRIP DOMAIN PROTEIN 1","Casparian strip domain protein 1",4," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048226 - Casparian strip, GO:0051592 - response to calcium ion, GO:0051924 - regulation of calcium ion transport, GO:0009808 - lignin metabolic process, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0007043 - cell-cell junction assembly, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0045927 - positive regulation of growth, GO:0042545 - cell wall modification","TO:0000731 - lignin content, TO:0000006 - calcium sensitivity","PO:0009005 - root , PO:0025181 - root elongation zone , PO:0000252 - endodermis ","Os04g0684300","LOC_Os04g58760.1"]
[{"$nulls":30},"Os11g0104900",-1.3233389,{"$nulls":83},"FAH2","OsFAH2","FATTY ACID HYDROXYLASE 2","fatty acid hydroxylase 2",3," Biochemical character,  Seed - Physiological traits,  Tolerance and resistance - Stress tolerance","GO:0005789 - endoplasmic reticulum membrane, GO:0016126 - sterol biosynthetic process, GO:0016491 - oxidoreductase activity, GO:0016209 - antioxidant activity, GO:0050995 - negative regulation of lipid catabolic process, GO:0005506 - iron ion binding, GO:0000254 - C-4 methylsterol oxidase activity, GO:0016021 - integral to membrane, GO:0016020 - membrane","TO:0002657 - oxidative stress, TO:0000345 - seed viability",null,"Os03g0108500","LOC_Os03g01820.1"]
[{"$nulls":30},"Os03g0710800",-1.3234941,{"$nulls":83},"_","OsHyPRP7, HyPRP7","_","Hybrid Proline-Rich Protein 7",3," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os03g0250400","LOC_Os03g14630.1"]
[{"$nulls":30},"Os08g0535600",-1.3266329,{"$nulls":83},"NPH1B","PHOT2, OsPHOT2, OsNPH1b","NONPHOTOTROPHIC HYPOCOTYL 1B","phototropin 2, nonphototrophic hypocotyl 1b",4," Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0005737 - cytoplasm, GO:0005886 - plasma membrane, GO:0005634 - nucleus, GO:0006468 - protein amino acid phosphorylation, GO:0004674 - protein serine/threonine kinase activity, GO:0018298 - protein-chromophore linkage, GO:0009882 - blue light photoreceptor activity, GO:0005524 - ATP binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000075 - light sensitivity","PO:0025034 - leaf ","Os04g0304200","LOC_Os04g23890.4, LOC_Os04g23890.3, LOC_Os04g23890.1, LOC_Os04g23890.2"]
[{"$nulls":30},"Os01g0718000",-1.3273708,{"$nulls":83},"CTF","OsCTF","CADMIUM TOLERANCE FACTOR","cadmium tolerance factor",6," Tolerance and resistance - Stress tolerance,  Other","GO:0016020 - membrane, GO:0016021 - integral to membrane, GO:0046686 - response to cadmium ion",null,null,"Os06g0296100","LOC_Os06g19210.1"]
[{"$nulls":30},"Os12g0638400",-1.3290421,{"$nulls":83},"DF","GPI8, OsGPI8","DROOPING AND FRAGILE","GPI transamidase catalytic subunit 8, drooping and fragile",2," Biochemical character,  Vegetative organ - Culm,  Tolerance and resistance - Stress tolerance","GO:0009266 - response to temperature stimulus, GO:0003923 - GPI-anchor transamidase activity, GO:0034394 - protein localization at cell surface, GO:0010375 - stomatal complex patterning, GO:0042765 - GPI-anchor transamidase complex, GO:0008233 - peptidase activity, GO:0016255 - attachment of GPI anchor to protein, GO:0051301 - cell division, GO:0044038 - cell wall macromolecule biosynthetic process","TO:0000145 - internode length, TO:0000432 - temperature response trait, TO:0000731 - lignin content, TO:0000333 - sugar content, TO:0000051 - stem strength",null,"Os02g0219400","LOC_Os02g12740.1"]
[{"$nulls":30},"Os01g0361800",-1.3318833,{"$nulls":83},"PDR2","OsPDR2","PHOSPHATE DEFICIENCY RESPONSE 2","Phosphate Deficiency Response2",5," Vegetative organ - Root,  Reproductive organ,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0055062 - phosphate ion homeostasis, GO:0010152 - pollen maturation, GO:0005783 - endoplasmic reticulum, GO:0005886 - plasma membrane, GO:0016021 - integral to membrane, GO:0048364 - root development, GO:0009846 - pollen germination, GO:0010073 - meristem maintenance, GO:0016036 - cellular response to phosphate starvation, GO:0006874 - cellular calcium ion homeostasis, GO:0006812 - cation transport, GO:0046872 - metal ion binding, GO:0005524 - ATP binding, GO:0016887 - ATPase activity","TO:0000371 - yield trait, TO:0000656 - root development trait","PO:0007520 - root development stage ","Os05g0402800","LOC_Os05g33390.1"]
[{"$nulls":30},"Os05g0373700",-1.3328136,{"$nulls":83},"SIR109944 ","siR109944","SMALL INTERFERING RNA SIR109944","small interfering RNA siR109944",null," Vegetative organ - Leaf,  Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Other","GO:0009734 - auxin mediated signaling pathway, GO:0010252 - auxin homeostasis, GO:0050832 - defense response to fungus, GO:0016246 - RNA interference, GO:0009850 - auxin metabolic process","TO:0000124 - flag leaf angle, TO:0000255 - sheath blight disease resistance, TO:0000227 - root length"]
[{"$nulls":30},"Os05g0277200",-1.3343531,{"$nulls":83},"DUF668-3","OsDUF668-3","DUF668 FAMILY MEMBER 3","DUF668 family member 3",2," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009409 - response to cold, GO:0009735 - response to cytokinin stimulus, GO:0006970 - response to osmotic stress, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0010224 - response to UV-B, GO:0009739 - response to gibberellin stimulus, GO:0009733 - response to auxin stimulus","TO:0000074 - blast disease, TO:0000095 - osmotic response sensitivity, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0000601 - UV-B light sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000167 - cytokinin sensitivity","PO:0000003 - whole plant ","Os02g0551700","LOC_Os02g34650.1"]
[{"$nulls":30},"Os09g0294000",-1.3360862,{"$nulls":83},"_","OsSTA186","_",null,7," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0016036 - cellular response to phosphate starvation","TO:0000102 - phosphorus sensitivity, TO:0006001 - salt tolerance","PO:0009066 - anther ","Os07g0137800","LOC_Os07g04520.1"]
[{"$nulls":30},"Os01g0920000",-1.3375813,{"$nulls":83},"_","OsLSK1, LSK1","_","Large spike S-domain receptor like Kinase 1",1," Tolerance and resistance,  Character as QTL - Yield and productivity","GO:0009939 - positive regulation of gibberellic acid mediated signaling, GO:0010372 - positive regulation of gibberellin biosynthetic process, GO:0048544 - recognition of pollen, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009628 - response to abiotic stimulus, GO:0009651 - response to salt stress, GO:0005886 - plasma membrane, GO:0006970 - response to osmotic stress","TO:0006001 - salt tolerance, TO:0002759 - grain number, TO:0000396 - grain yield, TO:0000207 - plant height, TO:0000547 - primary branch number, TO:0000095 - osmotic response sensitivity",null,"Os01g0669100","LOC_Os01g47900.1"]
[{"$nulls":30},"Os06g0215300",-1.340022,{"$nulls":83},"UBC26","OsUBC26","UBIQUITIN-CONJUGATING ENZYME 26","Ubiquitin-conjugating enzyme 26",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity, TO:0000401 - plant growth hormone sensitivity, TO:0000276 - drought tolerance","PO:0009005 - root , PO:0009049 - inflorescence , PO:0025034 - leaf ","Os12g0636800","LOC_Os12g44000.3, LOC_Os12g44000.1, LOC_Os12g44000.2"]
[{"$nulls":30},"Os03g0200500",-1.3408308,{"$nulls":83},"CAMTA","OsCAMTA, qSCT1","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR","CaM-binding transcription factor homolog, OsCBT homolog, CBT homolog, QTL for seedling cold tolerance on chromosome 1, calmodulin-binding transcription activator",1," Tolerance and resistance - Stress tolerance,  Other","GO:0045944 - positive regulation of transcription from RNA polymerase II promoter, GO:0005634 - nucleus, GO:0003677 - DNA binding, GO:0043565 - sequence-specific DNA binding, GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0009005 - root , PO:0025034 - leaf , PO:0009030 - carpel , PO:0009066 - anther ","Os01g0923600","LOC_Os01g69910.1, LOC_Os01g69910.2, LOC_Os01g69910.3"]
[{"$nulls":30},"Os05g0427100",-1.3413029,{"$nulls":83},"CAMTA6","OsCAMTA6","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6","CaM-binding transcription factor homolog, OsCBT homolog, CBT homolog, Calmodulin-binding Transcription Activator 6",7," Tolerance and resistance - Stress tolerance,  Other","GO:0006357 - regulation of transcription from RNA polymerase II promoter, GO:0005634 - nucleus, GO:0009414 - response to water deprivation, GO:0019722 - calcium-mediated signaling, GO:0005516 - calmodulin binding, GO:0003690 - double-stranded DNA binding, GO:0003712 - transcription cofactor activity","TO:0000276 - drought tolerance","PO:0009005 - root , PO:0025034 - leaf ","Os07g0623100 ","LOC_Os07g43030.1"]
[{"$nulls":30},"Os01g0956300",-1.3424999,{"$nulls":83},"_","OsPFK10, PFK10","_","phosphofructokinase 10",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009536 - plastid, GO:0003872 - 6-phosphofructokinase activity, GO:0005524 - ATP binding, GO:0005737 - cytoplasm, GO:0006002 - fructose 6-phosphate metabolic process, GO:0046872 - metal ion binding, GO:0034059 - response to anoxia, GO:0006096 - glycolysis","TO:0000482 - chemical stress sensitivity",null,"Os10g0405600","LOC_Os10g26570.1"]
[{"$nulls":30},"Os03g0606100",-1.3435427,{"$nulls":83},"_","Pikh-1","_","Pyricularia oryzae resistance kh-1",11," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease"]
[{"$nulls":30},"Os03g0117300",-1.3458543,{"$nulls":83},"OSCA1.2","OsOSCA1.2, OsIOSCA1.2, OsDDP6, DDP6, OsDDP6.1, OsDDP6.2","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 1.2","Hyperosmolality-gated calcium-permeable channel 1.2, DUF221 Domain containing Protein 6",5," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016020 - membrane, GO:0006560 - proline metabolic process, GO:0005886 - plasma membrane, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0006970 - response to osmotic stress, GO:0007623 - circadian rhythm","TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity","PO:0007022 - seed imbibition stage ","Os05g0594700","LOC_Os05g51630.2, LOC_Os05g51630.1"]
[{"$nulls":30},"Os02g0824400",-1.3483877,{"$nulls":83},"PSKR1","OsPSKR1, OsPSKR10, PSKR10","PHYTOSULFOKINE RECEPTOR 1 ","phytosulfokine receptor 1, Phytosulfokine Receptor 10",2," Vegetative organ - Root,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0048364 - root development, GO:0005886 - plasma membrane, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009409 - response to cold, GO:0009408 - response to heat, GO:0005524 - ATP binding, GO:0016021 - integral to membrane, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000203 - bacterial leaf streak disease resistance, TO:0000656 - root development trait, TO:0000074 - blast disease, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance","PO:0009005 - root , PO:0007520 - root development stage ","Os02g0629400 ","LOC_Os02g41890.1"]
[{"$nulls":30},"Os07g0131200",-1.3505722,{"$nulls":83},"_","OsLecRK2, LecRK2","_","Lectin Receptor Kinase 2",4," Tolerance and resistance - Insect resistance","GO:0001653 - peptide receptor activity, GO:0031625 - ubiquitin protein ligase binding, GO:0046777 - protein amino acid autophosphorylation, GO:0009755 - hormone-mediated signaling, GO:0009506 - plasmodesma, GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway, GO:0005886 - plasma membrane, GO:0005524 - ATP binding, GO:0004675 - transmembrane receptor protein serine/threonine kinase activity, GO:0002213 - defense response to insect","TO:0000424 - brown planthopper resistance",null,"Os04g0202300","LOC_Os04g12560.1"]
[{"$nulls":30},"Os06g0487620",-1.3528004,{"$nulls":83},"_","OsMYBc, MYBc","_","MYB coiled-coil type transcription factor",9," Tolerance and resistance - Stress tolerance,  Other","GO:0003677 - DNA binding, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os09g0299200","LOC_Os09g12770.1, LOC_Os09g12770.2"]
[{"$nulls":30},"Os06g0708500",-1.3535131,{"$nulls":83},"_","OsHIGD2, HIGD2","_","hypoxia induced protein, Hypoxia-Induced Gene Domain 2, Hypoxia-Induced Gene Domain Protein 2",7," Tolerance and resistance - Stress tolerance","GO:0030912 - response to deep water, GO:0005739 - mitochondrion, GO:0009723 - response to ethylene stimulus, GO:0033617 - mitochondrial respiratory chain complex IV assembly, GO:0031305 - integral to mitochondrial inner membrane, GO:0016021 - integral to membrane, GO:0001666 - response to hypoxia","TO:0000173 - ethylene sensitivity, TO:0000524 - submergence tolerance, TO:0000015 - oxygen sensitivity","PO:0025034 - leaf , PO:0009005 - root , PO:0009010 - seed , PO:0020037 - mesocotyl ","Os07g0673900 ","LOC_Os07g47670.1, LOC_Os07g47670.2"]
[{"$nulls":30},"Os10g0136200",-1.3551694,{"$nulls":83},"BG1","OsaBG1, OsBG1","BIG GRAIN1","big grain1, big grain 1",3," Biochemical character,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0005886 - plasma membrane, GO:0009733 - response to auxin stimulus, GO:0009630 - gravitropism","TO:0000163 - auxin sensitivity, TO:0000181 - seed weight, TO:0000397 - grain size, TO:0000396 - grain yield, TO:0002693 - gravity response trait","PO:0025205 - shoot system vascular system , PO:0005028 - inflorescence vascular system ","Os03g0175800","LOC_Os03g07920.1"]
[{"$nulls":30},"Os04g0630000",-1.3579072,{"$nulls":83},"_","OsCYL3, CYL3","_","cyclase-like 3",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004061 - arylformamidase activity, GO:0009723 - response to ethylene stimulus, GO:0009733 - response to auxin stimulus, GO:0009735 - response to cytokinin stimulus, GO:0009739 - response to gibberellin stimulus, GO:0019441 - tryptophan catabolic process to kynurenine, GO:0009737 - response to abscisic acid stimulus, GO:0009741 - response to brassinosteroid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009753 - response to jasmonic acid stimulus","TO:0000173 - ethylene sensitivity, TO:0000167 - cytokinin sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000163 - auxin sensitivity, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002677 - brassinosteroid sensitivity, TO:0000166 - gibberellic acid sensitivity",null,"Os08g0319900 ","LOC_Os08g23100.1, LOC_Os08g23100.2"]
[{"$nulls":30},"Os05g0110800",-1.3594155,{"$nulls":83},"NPF6.5","OsNRT1.1B, NRT1.1B, OsNPF6.5","NRT1/PTR FAMILY 6.5","nitrate transporter 1.1B",10," Biochemical character,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0010157 - response to chlorate, GO:0010167 - response to nitrate, GO:0016020 - membrane, GO:0006808 - regulation of nitrogen utilization, GO:0009608 - response to symbiont, GO:0005215 - transporter activity","TO:0000394 - drought related trait, TO:0000396 - grain yield","PO:0025034 - leaf , PO:0009005 - root ","Os10g0554200 ","LOC_Os10g40600.1"]
[{"$nulls":30},"Os08g0126300",-1.3604058,{"$nulls":83},"PHR3","OsPHR3, Os-PHR3, OsPHL1, PHL1","PHOSPHATE STARVATION RESPONSE 3","Phosphate Starvation Response3, PHOSPHATE RESPONSE3",7," Vegetative organ - Root,  Tolerance and resistance - Stress tolerance","GO:0048830 - adventitious root development, GO:0048527 - lateral root development, GO:0009635 - response to herbicide, GO:0055081 - anion homeostasis, GO:0048767 - root hair elongation, GO:0042594 - response to starvation, GO:0003677 - DNA binding, GO:0016036 - cellular response to phosphate starvation","TO:0002665 - root hair length, TO:0000058 - herbicide sensitivity, TO:0000168 - abiotic stress trait","PO:0007519 - 5 root hair formation stage ","Os02g0139000 ","LOC_Os02g04640.1"]
[{"$nulls":30},"Os01g0738866",-1.3635598,{"$nulls":83},"_","OsNAC2","_",null,null," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance"]
[{"$nulls":30},"Os01g0204000",-1.3640248,{"$nulls":83},"_","OsMYB46","_",null,null," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance"]
[{"$nulls":30},"Os11g0222200",-1.3667742,{"$nulls":83},"_","PPX, PPO1","_","Proporphyrinogen oxidase, protoporphyrinogen oxidase 1",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity, GO:0006782 - protoporphyrinogen IX biosynthetic process, GO:0009507 - chloroplast, GO:0015995 - chlorophyll biosynthetic process, GO:0010114 - response to red light","TO:0000158 - red light sensitivity",null,"Os01g0286600 ","LOC_Os01g18320.1"]
[{"$nulls":30},"Os07g0173501",-1.3676447,{"$nulls":83},"_",null,"_",null,11," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os11g0549665 ","LOC_Os11g34790.1"]
[{"$nulls":30},"Os06g0652200",-1.3686751,{"$nulls":83},"_",null,"_",null,10," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance",null,"Os10g0381601 ","LOC_Os10g24004.1"]
[{"$nulls":30},"Os06g0309000",-1.3710469,{"$nulls":83},"SUB12","OsSub12","SUBTILISIN 12","Subtilisin 12",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0004252 - serine-type endopeptidase activity",null,null,"Os02g0198700","LOC_Os02g10520.1"]
[{"$nulls":30},"Os05g0150300",-1.3731136,{"$nulls":83},"LRK2","OsLRK2, OsPSKR8, PSKR8","LEUCINE-RICH RECEPTOR-LIKE KINASE 2","leucine-rich receptor-like kinase 2, Phytosulfokine Receptor 8",2," Vegetative organ - Root,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0004672 - protein kinase activity, GO:0005524 - ATP binding, GO:0048527 - lateral root development, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005886 - plasma membrane","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000203 - bacterial leaf streak disease resistance, TO:0000447 - filled grain number, TO:0000440 - grain number per plant, TO:0000653 - seed development trait, TO:0001013 - lateral root number, TO:0000346 - tiller number","PO:0009066 - anther , PO:0005004 - shoot node , PO:0009005 - root , PO:0000055 - bud , PO:0001170 - seed development stage , PO:0009009 - plant embryo , PO:0025034 - leaf ","Os02g0154000","LOC_Os02g05970.1"]
[{"$nulls":30},"Os11g0497000",-1.3772348,{"$nulls":83},"_","OsGABA-T, GABA-T","_","gamma-aminobutyrate transaminase",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009411 - response to UV, GO:0005737 - cytoplasm, GO:0050832 - defense response to fungus, GO:0009737 - response to abscisic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0030170 - pyridoxal phosphate binding, GO:0010941 - regulation of cell death, GO:0009611 - response to wounding, GO:0008483 - transaminase activity","TO:0000615 - abscisic acid sensitivity, TO:0000074 - blast disease, TO:0000160 - UV light sensitivity",null,"Os02g0112900","LOC_Os02g02210.1"]
[{"$nulls":30},"Os10g0173000",-1.3783728,{"$nulls":83},"COLD1","OsCOLD1","CHILLING TOLERANCE DIVERGENCE 1",null,4," Tolerance and resistance - Stress tolerance","GO:0005789 - endoplasmic reticulum membrane, GO:0070417 - cellular response to cold, GO:0009409 - response to cold, GO:0016021 - integral to membrane, GO:0051020 - GTPase binding, GO:0007186 - G-protein coupled receptor protein signaling pathway, GO:0005886 - plasma membrane","TO:0000303 - cold tolerance",null,"Os04g0600800","LOC_Os04g51180.1, LOC_Os04g51180.2"]
[{"$nulls":30},"Os11g0544100",-1.3789066,{"$nulls":83},"COLD5",null,"CHILLING TOLERANCE DIVERGENCE 5",null,2," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance"]
[{"$nulls":30},"Os04g0372400",-1.3794788,{"$nulls":83},"_",null,"_",null,1," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0009753 - response to jasmonic acid stimulus","TO:0000074 - blast disease, TO:0000172 - jasmonic acid sensitivity",null,"Os01g0714600","LOC_Os01g51670.1"]
[{"$nulls":30},"Os09g0556400",-1.3813453,{"$nulls":83},"_",null,"_",null,null," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease"]
[{"$nulls":30},"Os03g0114400",-1.3837371,{"$nulls":83},"_","OsIFSC047991","_",null,null," Tolerance and resistance - Disease resistance"]
[{"$nulls":30},"Os09g0385900",-1.3850336,{"$nulls":83},"_","OsIFCC045542","_",null,null," Tolerance and resistance - Disease resistance"]
[{"$nulls":30},"Os04g0500600",-1.3868304,{"$nulls":83},"_",null,"_",null,4," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding",null,null,"Os04g0491000 ","LOC_Os04g41370.1"]
[{"$nulls":30},"Os05g0489900",-1.3878969,{"$nulls":83},"_",null,"_",null,1," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding",null,null,"Os01g0781100  ","LOC_Os01g57270.1, LOC_Os01g57270.2"]
[{"$nulls":30},"Os01g0273000",-1.3887334,{"$nulls":83},"_",null,"_",null,11," Tolerance and resistance - Disease resistance","GO:0043531 - ADP binding",null,null,"Os11g0704100 ","LOC_Os11g47780.1"]
[{"$nulls":30},"Os09g0462200",-1.3915201,{"$nulls":83},"AAH","OsAAH","ALLANTOATE AMIDOHYDROLASE","allantoate amidohydrolase",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0008237 - metallopeptidase activity, GO:0000256 - allantoin catabolic process, GO:0015996 - chlorophyll catabolic process, GO:0046872 - metal ion binding, GO:0047652 - allantoate deiminase activity, GO:0005783 - endoplasmic reticulum, GO:0010136 - ureide catabolic process, GO:0006144 - purine base metabolic process","TO:0000011 - nitrogen sensitivity",null,"Os06g0665500","LOC_Os06g45480.1, LOC_Os06g45480.2"]
[{"$nulls":30},"Os01g0315800",-1.3936968,{"$nulls":83},"_","OsPTP2, PTP2","_","protein tyrosine phosphatase 2",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009738 - abscisic acid mediated signaling, GO:0051707 - response to other organism, GO:0004725 - protein tyrosine phosphatase activity, GO:0009863 - salicylic acid mediated signaling pathway, GO:0009628 - response to abiotic stimulus","TO:0000615 - abscisic acid sensitivity, TO:0000112 - disease resistance, TO:0000168 - abiotic stress trait",null,"Os11g0180200","LOC_Os11g07850.1"]
[{"$nulls":30},"Os11g0197000",-1.3958602,{"$nulls":83},"TET1","OsTET1","TETRASPANIN 1","tetraspanin 1",1," Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006995 - cellular response to nitrogen starvation, GO:0005886 - plasma membrane, GO:0009408 - response to heat, GO:0010438 - cellular response to sulfur starvation, GO:0016021 - integral to membrane, GO:0010150 - leaf senescence","TO:0000259 - heat tolerance, TO:0000249 - leaf senescence","PO:0009051 - spikelet , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os01g0977100","LOC_Os01g74570.1"]
[{"$nulls":30},"Os05g0207300",-1.3980923,{"$nulls":83},"TET6","OsTET6","TETRASPANIN 6","tetraspanin 6",3," Tolerance and resistance - Stress tolerance","GO:0042542 - response to hydrogen peroxide, GO:0009739 - response to gibberellin stimulus, GO:0016021 - integral to membrane, GO:0009753 - response to jasmonic acid stimulus, GO:0010438 - cellular response to sulfur starvation, GO:0006970 - response to osmotic stress, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0009737 - response to abscisic acid stimulus, GO:0009651 - response to salt stress, GO:0009507 - chloroplast","TO:0000172 - jasmonic acid sensitivity, TO:0002657 - oxidative stress, TO:0006001 - salt tolerance, TO:0000095 - osmotic response sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000259 - heat tolerance, TO:0000303 - cold tolerance","PO:0025034 - leaf ","Os03g0853200","LOC_Os03g63620.1"]
[{"$nulls":30},"Os09g0504800",-1.4011828,{"$nulls":83},"EXO70B1","OsEXO70B1, OsExo70B1, OrysaB1_Exo70","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1","exocyst subunit EXO70 family protein B1",1," Tolerance and resistance - Disease resistance","GO:0000145 - exocyst, GO:0006887 - exocytosis, GO:0005737 - cytoplasm, GO:0005634 - nucleus, GO:0050832 - defense response to fungus, GO:0005886 - plasma membrane","TO:0000074 - blast disease, TO:0000605 - hydrogen peroxide content","PO:0009006 - shoot system , PO:0025034 - leaf ","Os01g0827500 ","LOC_Os01g61180.1"]
[{"$nulls":30},"Os01g0943000",-1.4035999,{"$nulls":83},"F3H1","OsF3H-1, F3H-1, OsF3H1, OsF3H, F3H","FLAVANONE 3-HYDROXYLASE 1","Flavanone 3-hydroxylase 1",4," Biochemical character,  Vegetative organ - Culm,  Reproductive organ - panicle,  Coloration - Anthocyanin,  Seed,  Seed - Morphological traits,  Tolerance and resistance - Insect resistance,  Character as QTL - Yield and productivity","GO:0009718 - anthocyanin biosynthetic process, GO:0031542 - positive regulation of anthocyanin biosynthetic process, GO:0045486 - naringenin 3-dioxygenase activity, GO:0010224 - response to UV-B, GO:0002213 - defense response to insect, GO:0009698 - phenylpropanoid metabolic process, GO:0016491 - oxidoreductase activity, GO:0080141 - regulation of jasmonic acid biosynthetic process, GO:0051555 - flavonol biosynthetic process","TO:0000328 - sucrose content, TO:0000205 - white-backed planthopper resistance, TO:0000590 - grain weight, TO:0000040 - panicle length, TO:0000495 - chlorophyll content, TO:0006005 - fructose content, TO:0000300 - glucose content, TO:0000290 - flavonoid content, TO:0000071 - anthocyanin content, TO:0000207 - plant height, TO:0000707 - pericarp color, TO:0000180 - spikelet fertility",null,"Os04g0662600","LOC_Os04g56700.1"]
[{"$nulls":30},"Os03g0762200",-1.4041151,{"$nulls":83},"_","OsmtATPS1, mtATPS1","_","mitochondrial proton-transporting ATP synthase 1",4," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), GO:0015078 - hydrogen ion transmembrane transporter activity, GO:0016021 - integral to membrane, GO:0015986 - ATP synthesis coupled proton transport","TO:0000276 - drought tolerance",null,"Os04g0117100 ","LOC_Os04g02670.1"]
[{"$nulls":30},"Os02g0655700",-1.4062365,{"$nulls":83},"SLAC1","OsSLAC1, OsSLAH1, SLAH1","SLOW ANION CHANNEL 1","S-type anion channel 1, slow anion channel 1, slow-type anion channel 1, Slow-Type Anion Channel-Associated Homolog 1",4," Biochemical character,  Vegetative organ - Leaf,  Tolerance and resistance - Stress tolerance","GO:0006873 - cellular ion homeostasis, GO:0010118 - stomatal movement, GO:0010193 - response to ozone, GO:0010374 - stomatal complex development, GO:0015711 - organic anion transport, GO:0016021 - integral to membrane, GO:0050891 - multicellular organismal water homeostasis, GO:0009651 - response to salt stress, GO:0010233 - phloem transport, GO:0006814 - sodium ion transport, GO:0006863 - purine transport, GO:0010109 - regulation of photosynthesis, GO:0008308 - voltage-gated anion channel activity, GO:0006821 - chloride transport, GO:0009270 - response to humidity, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0009738 - abscisic acid mediated signaling, GO:0010037 - response to carbon dioxide, GO:0010119 - regulation of stomatal movement, GO:0005886 - plasma membrane","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000522 - stomatal conductance, TO:0000131 - leaf water potential","PO:0020104 - leaf sheath , PO:0025034 - leaf , PO:0000293 - guard cell ","Os04g0574700","LOC_Os04g48530.1"]
[{"$nulls":30},"Os07g0509700",-1.4074887,{"$nulls":83},"WNK1","OsWNK1","WITH NO LYSINE KINASE 1","With No Lysine kinase 1, WNK protein kinase 1, WNK kinase 1",7," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0007623 - circadian rhythm, GO:0009416 - response to light stimulus, GO:0005524 - ATP binding, GO:0009409 - response to cold","TO:0006001 - salt tolerance, TO:0000075 - light sensitivity, TO:0000303 - cold tolerance, TO:0000276 - drought tolerance",null,"Os07g0572800","LOC_Os07g38530.1, LOC_Os07g38530.2"]
[{"$nulls":30},"Os03g0678800",-1.4089929,{"$nulls":83},"_","OsEnS-64, PCC13-62, OsPCC13-62","_","endosperm-specific gene 64, desiccation-related protein, desiccation-related protein PCC13-62",4," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os04g0404400","LOC_Os04g33150.1"]
[{"$nulls":30},"Os01g0279400",-1.4105982,{"$nulls":83},"HYD2","OsBCH3, BCH3, OsHYD2, OsBCH2, BCH2","BETA-CAROTENE HYDROXYLASE  2","beta-Carotene Hydroxylase 3, carotene beta-ring hydroxylase 2, beta-carotene hydroxylase  2",10," Biochemical character,  Coloration - Others,  Tolerance and resistance - Stress tolerance","GO:0009416 - response to light stimulus, GO:0016021 - integral to membrane, GO:0006633 - fatty acid biosynthetic process, GO:0016117 - carotenoid biosynthetic process, GO:0005506 - iron ion binding","TO:0000075 - light sensitivity",null,"Os10g0533500","LOC_Os10g38940.1"]
[{"$nulls":30},"Os04g0600300",-1.4118823,{"$nulls":83},"_","OsPDF1.2, DEFL6, OsDEFL6, OsDf-06, Df-06","_","PLANT DEFENSIN 1.2, defensin-like 6",2," Tolerance and resistance","GO:0006952 - defense response, GO:0009753 - response to jasmonic acid stimulus","TO:0000172 - jasmonic acid sensitivity",null,"Os02g0212100","LOC_Os02g12060.1"]
[{"$nulls":30},"Os08g0544900",-1.4161037,{"$nulls":83},"RLCK103","GUDK, OsRLCK103","RECEPTOR-LIKE CYTOPLASMIC KINASE 103","GROWTH UNDER DROUGHT KINASE, Receptor-like Cytoplasmic Kinase 103",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0048316 - seed development, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0042742 - defense response to bacterium, GO:0009409 - response to cold, GO:0006970 - response to osmotic stress, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity","TO:0000396 - grain yield, TO:0000227 - root length, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000457 - total biomass yield, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance, TO:0000095 - osmotic response sensitivity, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0179400","LOC_Os03g08170.1"]
[{"$nulls":30},"Os03g0751100",-1.4168788,{"$nulls":83},"LAC3","OsChI1, ChI1, OsLAC3","LACCASE 3","chilling inducible gene 1, lactase, lactase 3",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0048046 - apoplast, GO:0046274 - lignin catabolic process, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005507 - copper ion binding, GO:0000302 - response to reactive oxygen species, GO:0046688 - response to copper ion, GO:0046686 - response to cadmium ion, GO:0010038 - response to metal ion","TO:0000021 - copper sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000034 - chromium sensitivity, TO:0000303 - cold tolerance","PO:0009089 - endosperm ","Os01g0827300","LOC_Os01g61160.1"]
[{"$nulls":30},"Os07g0419200",-1.4180031,{"$nulls":83},"DI19-1","OsDi19-1","DROUGHT-INDUCED 19-1","drought-induced 19-1, dehydration-induced 19-1",5," Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance","GO:0034059 - response to anoxia, GO:0009845 - seed germination",null,"PO:0007057 - 0 seed germination stage ","Os05g0562200","LOC_Os05g48800.1, LOC_Os05g48800.2, LOC_Os05g48800.3"]
[{"$nulls":30},"Os03g0825700",-1.4199663,{"$nulls":83},"CEP2","OsCEP2, OsCEP4, CEP4, OsCEP5, CEP5","C-TERMINALLY ENCODED PEPTIDE 2","C-terminally encoded peptide 5",3," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold","TO:0000303 - cold tolerance","PO:0009006 - shoot system , PO:0009005 - root ",null,"LOC_Os03g27690"]
[{"$nulls":30},"Os01g0909150",-1.4208838,{"$nulls":83},"HYPRP12","OsHyPRP12, HyP/GRP12, OsHyPRP32, HyPRP32","HYBRID PROLINE- OR GLYCINE-RICH PROTEIN 12","hybrid proline- or glycine-rich protein 12, Hybrid Proline-Rich Protein 32",10," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os10g0349900 ","LOC_Os10g20890.1"]
[{"$nulls":30},"Os01g0632700",-1.4249572,{"$nulls":83},"CRRLK1L10","OsCrRLK1L10, CrRLK1L10, OsMRLK20, MRLK20","CATHARANTHUS ROSEUS RECEPTOR-LIKE KINASE1-LIKE KINASE 10","Catharanthus roseus receptor-like kinase1-like kinase 10, malectin/malectin-like receptor-like kinase 20",5," Tolerance and resistance - Stress tolerance","GO:0048364 - root development, GO:0009414 - response to water deprivation, GO:0005886 - plasma membrane","TO:0000276 - drought tolerance","PO:0009005 - root , PO:0007520 - root development stage ","Os05g0162500","LOC_Os05g06990.1"]
[{"$nulls":30},"Os07g0543100",-1.4268357,{"$nulls":83},"_","OsTPS3, TPS3, OsLIS, LIS","_","terpene synthase 3, linalool synthase",2," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0009507 - chloroplast, GO:0034007 - S-linalool synthase activity, GO:0010333 - terpene synthase activity, GO:0042742 - defense response to bacterium, GO:0016099 - monoterpenoid biosynthetic process, GO:0016114 - terpenoid biosynthetic process, GO:0000287 - magnesium ion binding, GO:0051607 - defense response to virus","TO:0000148 - viral disease resistance, TO:0000386 - rice ragged stunt virus resistance",null,"Os02g0121700","LOC_Os02g02930.1"]
[{"$nulls":30},"Os05g0227700",-1.4302491,{"$nulls":83},"RLCK11","OsRLCK11","RECEPTOR-LIKE CYTOPLASMIC KINASE 11","Receptor-like Cytoplasmic Kinase 11",1," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os01g0115600","LOC_Os01g02560.1"]
[{"$nulls":30},"Os07g0656200",-1.4330872,{"$nulls":83},"RLCK23","OsRLCK23","RECEPTOR-LIKE CYTOPLASMIC KINASE 23","Receptor-like Cytoplasmic Kinase 23",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009409 - response to cold","TO:0000074 - blast disease, TO:0000303 - cold tolerance",null,"Os01g0137950","LOC_Os01g04550.1"]
[{"$nulls":30},"Os12g0140200",-1.438152,{"$nulls":83},"RLCK48","OsRLCK48","RECEPTOR-LIKE CYTOPLASMIC KINASE 48","Receptor-like Cytoplasmic Kinase 48",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009414 - response to water deprivation","TO:0000175 - bacterial blight disease resistance, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os01g0852100","LOC_Os01g63280.1, LOC_Os01g63280.2, LOC_Os01g63280.3"]
[{"$nulls":30},"Os11g0186500",-1.4423836,{"$nulls":83},"RLCK58","OsRLCK58","RECEPTOR-LIKE CYTOPLASMIC KINASE 58","Receptor-like Cytoplasmic Kinase 58",2," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0004672 - protein kinase activity, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance",null,"Os02g0106900","LOC_Os02g01730.1"]
[{"$nulls":30},"Os08g0263300",-1.4435573,{"$nulls":83},"RLCK74","OsRLCK74","RECEPTOR-LIKE CYTOPLASMIC KINASE 74","Receptor-like Cytoplasmic Kinase 74",2," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0004713 - protein tyrosine kinase activity","TO:0000074 - blast disease",null,"Os02g0565500","LOC_Os02g35760.1, LOC_Os02g35760.2"]
[{"$nulls":30},"Os04g0663500",-1.4438448,{"$nulls":83},"RLCK78","OsRLCK78","RECEPTOR-LIKE CYTOPLASMIC KINASE 78","Receptor-like Cytoplasmic Kinase 78",2," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000074 - blast disease",null,"Os02g0639100","LOC_Os02g42620.1"]
[{"$nulls":30},"Os05g0566200",-1.4501446,{"$nulls":83},"RLCK95","OsRLCK95","RECEPTOR-LIKE CYTOPLASMIC KINASE 95","Receptor-like Cytoplasmic Kinase 95",3," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004674 - protein serine/threonine kinase activity, GO:0009651 - response to salt stress","TO:0000303 - cold tolerance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance",null,"Os03g0113000","LOC_Os03g02190.1"]
[{"$nulls":30},"Os03g0126000",-1.4519099,{"$nulls":83},"RLCK100","OsRLCK100","RECEPTOR-LIKE CYTOPLASMIC KINASE 100","Receptor-like Cytoplasmic Kinase 100",3," Reproductive organ - panicle,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding, GO:0042742 - defense response to bacterium, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os03g0148700","LOC_Os03g05470.1"]
[{"$nulls":30},"Os06g0354500",-1.4539615,{"$nulls":83},"RLCK107","OsRLCK107","RECEPTOR-LIKE CYTOPLASMIC KINASE 107","Receptor-like Cytoplasmic Kinase 107",3," Vegetative organ - Leaf,  Tolerance and resistance - Disease resistance,  Character as QTL - Yield and productivity","GO:0004674 - protein serine/threonine kinase activity, GO:0010200 - response to chitin, GO:0032494 - response to peptidoglycan, GO:0042742 - defense response to bacterium, GO:0002237 - response to molecule of bacterial origin, GO:0009741 - response to brassinosteroid stimulus, GO:0009742 - brassinosteroid mediated signaling, GO:0050832 - defense response to fungus, GO:0005524 - ATP binding","TO:0000206 - leaf angle, TO:0002677 - brassinosteroid sensitivity, TO:0000445 - seed number, TO:0000346 - tiller number, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os03g0274800","LOC_Os03g16740.1, LOC_Os03g16740.2"]
[{"$nulls":30},"Os02g0108000",-1.456885,{"$nulls":83},"RLCK123","OsRLCK123","RECEPTOR-LIKE CYTOPLASMIC KINASE 123","Receptor-like Cytoplasmic Kinase 123",3," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0004713 - protein tyrosine kinase activity, GO:0005524 - ATP binding, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding","TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os03g0844100","LOC_Os03g62700.1"]
[{"$nulls":30},"Os11g0117400",-1.458721,{"$nulls":83},"RLCK136","OsRLCK136, OsLecRK4, LecRK4","RECEPTOR-LIKE CYTOPLASMIC KINASE 136","Receptor-like Cytoplasmic Kinase 136, Lectin Receptor Kinase 4",4," Tolerance and resistance - Insect resistance","GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0005886 - plasma membrane","TO:0000424 - brown planthopper resistance",null,"Os04g0202800","LOC_Os04g12600.1"]
[{"$nulls":30},"Os08g0136600",-1.4612097,{"$nulls":83},"RLCK157","OsRLCK157","RECEPTOR-LIKE CYTOPLASMIC KINASE 157","Receptor-like Cytoplasmic Kinase 157",4," Reproductive organ - panicle,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0010229 - inflorescence development, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0563900","LOC_Os04g47620.1"]
[{"$nulls":30},"Os04g0684900",-1.4628081,{"$nulls":83},"RLCK167","OsRLCK167","RECEPTOR-LIKE CYTOPLASMIC KINASE 167","Receptor-like Cytoplasmic Kinase 167",4," Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity, GO:0009414 - response to water deprivation","TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os04g0654600","LOC_Os04g56060.1"]
[{"$nulls":30},"Os02g0593400",-1.4640751,{"$nulls":83},"RLCK173","OsRLCK173, OsBSK3, BSK3","RECEPTOR-LIKE CYTOPLASMIC KINASE 173","Receptor-like Cytoplasmic Kinase 173, BR-signaling kinase 3, brassinosteroid-signaling kinase 3, brassinosteroid-SIGNALING KINASE 3",4," Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0010229 - inflorescence development, GO:0009741 - response to brassinosteroid stimulus, GO:0004672 - protein kinase activity, GO:0050832 - defense response to fungus, GO:0009742 - brassinosteroid mediated signaling, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0002677 - brassinosteroid sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os04g0684200","LOC_Os04g58750.4, LOC_Os04g58750.3, LOC_Os04g58750.2, LOC_Os04g58750.1"]
[{"$nulls":30},"Os11g0491400",-1.4666516,{"$nulls":83},"RLCK199","OsRLCK199","RECEPTOR-LIKE CYTOPLASMIC KINASE 199","Receptor-like Cytoplasmic Kinase 199",6," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009611 - response to wounding, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity","TO:0006001 - salt tolerance, TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os06g0166900","LOC_Os06g07070.1"]
[{"$nulls":30},"Os07g0301200",-1.4696697,{"$nulls":83},"RLCK211","OsRLCK211","RECEPTOR-LIKE CYTOPLASMIC KINASE 211","Receptor-like Cytoplasmic Kinase 211",6," Tolerance and resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance",null,"Os06g0663200","LOC_Os06g45280.1"]
[{"$nulls":30},"Os08g0536350",-1.47122,{"$nulls":83},"RLCK220","OsRLCK220","RECEPTOR-LIKE CYTOPLASMIC KINASE 220","Receptor-like Cytoplasmic Kinase 220",6," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004674 - protein serine/threonine kinase activity, GO:0050832 - defense response to fungus, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000621 - inflorescence development trait, TO:0000653 - seed development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os06g0727400","LOC_Os06g51170.1"]
[{"$nulls":30},"Os10g0559300",-1.4732409,{"$nulls":83},"RLCK235","OsRLCK235","RECEPTOR-LIKE CYTOPLASMIC KINASE 235","Receptor-like Cytoplasmic Kinase 235",7," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium","TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance",null,"Os07g0538400","LOC_Os07g35390.1"]
[{"$nulls":30},"Os05g0386000",-1.4780875,{"$nulls":83},"RLCK245","OsRLCK245, PTK12, OsPTK12","RECEPTOR-LIKE CYTOPLASMIC KINASE 245","Receptor-like Cytoplasmic Kinase 245, Protein Tyrosine Kinase 12",8," Tolerance and resistance - Stress tolerance","GO:0004672 - protein kinase activity, GO:0006970 - response to osmotic stress, GO:0009737 - response to abscisic acid stimulus, GO:0005524 - ATP binding","TO:0000615 - abscisic acid sensitivity, TO:0000095 - osmotic response sensitivity","PO:0007616 - flowering stage ","Os08g0138700","LOC_Os08g04420.1, LOC_Os08g04420.2"]
[{"$nulls":30},"Os09g0371700",-1.4782263,{"$nulls":83},"RLCK247","OsRLCK247","RECEPTOR-LIKE CYTOPLASMIC KINASE 247","Receptor-like Cytoplasmic Kinase 247",8," Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0005524 - ATP binding, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity","TO:0000074 - blast disease",null,"Os08g0200500","LOC_Os08g10070.1, LOC_Os08g10070.2"]
[{"$nulls":30},"Os06g0270900",-1.4823111,{"$nulls":83},"RLCK272","OsRLCK272, PTK14, OsPTK14","RECEPTOR-LIKE CYTOPLASMIC KINASE 272","Receptor-like Cytoplasmic Kinase 272, Protein Tyrosine Kinase 14",9," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity, GO:0005524 - ATP binding, GO:0009408 - response to heat, GO:0006970 - response to osmotic stress, GO:0030912 - response to deep water, GO:0009737 - response to abscisic acid stimulus","TO:0000095 - osmotic response sensitivity, TO:0000653 - seed development trait, TO:0006001 - salt tolerance, TO:0000259 - heat tolerance, TO:0000524 - submergence tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000621 - inflorescence development trait","PO:0007616 - flowering stage , PO:0009030 - carpel , PO:0009066 - anther , PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os09g0442100","LOC_Os09g27010.1"]
[{"$nulls":30},"Os01g0925700",-1.4831867,{"$nulls":83},"RLCK290","OsRLCK290","RECEPTOR-LIKE CYTOPLASMIC KINASE 290","Receptor-like Cytoplasmic Kinase 290",10," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance",null,"Os10g0141200","LOC_Os10g05160.1"]
[{"$nulls":30},"Os02g0284800",-1.4865507,{"$nulls":83},"RLCK304","OsRLCK304, OsBSK1-2, BSK1-2","RECEPTOR-LIKE CYTOPLASMIC KINASE 304","Receptor-like Cytoplasmic Kinase 304, brassinosteroid-SIGNALING KINASE 1-2",10," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0009409 - response to cold, GO:0005524 - ATP binding, GO:0004672 - protein kinase activity, GO:0002237 - response to molecule of bacterial origin, GO:0002238 - response to molecule of fungal origin, GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os10g0542800","LOC_Os10g39670.1"]
[{"$nulls":30},"Os03g0397300",-1.488894,{"$nulls":83},"RLCK315","OsRLCK315, OsUSP39, USP39","RECEPTOR-LIKE CYTOPLASMIC KINASE 315","Receptor-like Cytoplasmic Kinase 315, universal stress protein 39",11," Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0005524 - ATP binding, GO:0009409 - response to cold, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation, GO:0004674 - protein serine/threonine kinase activity, GO:0009611 - response to wounding","TO:0000276 - drought tolerance, TO:0000303 - cold tolerance, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance","PO:0005052 - plant callus , PO:0009049 - inflorescence , PO:0009009 - plant embryo , PO:0025034 - leaf , PO:0009005 - root ","Os11g0194900","LOC_Os11g08950.1"]
[{"$nulls":30},"Os04g0346800",-1.4910231,{"$nulls":83},"RLCK334","OsRLCK334","RECEPTOR-LIKE CYTOPLASMIC KINASE 334","Receptor-like Cytoplasmic Kinase 334",11," Reproductive organ - panicle,  Seed,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0048316 - seed development, GO:0010229 - inflorescence development, GO:0004674 - protein serine/threonine kinase activity","TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000653 - seed development trait, TO:0000621 - inflorescence development trait","PO:0001083 - inflorescence development stage , PO:0001170 - seed development stage , PO:0009010 - seed , PO:0009049 - inflorescence ","Os11g0556400","LOC_Os11g35274.1"]
[{"$nulls":30},"Os03g0349000",-1.494166,{"$nulls":83},"MDHAR5","OsMDAR5, MDAR5, OsMDHAR5","MONODEHYDROASCORBATE REDUCTASE 5","monodehydroascorbate reductase 5",8," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0050660 - FAD binding, GO:0005739 - mitochondrion, GO:0010319 - stromule, GO:0009570 - chloroplast stroma, GO:0042744 - hydrogen peroxide catabolic process, GO:0016656 - monodehydroascorbate reductase (NADH) activity",null,null,"Os08g0151800 ","LOC_Os08g05570.4, LOC_Os08g05570.3"]
[{"$nulls":30},"Os01g0712700",-1.4967505,{"$nulls":83},"_",null,"_","PR2/Beta-1, 3-glucanase",1," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0005975 - carbohydrate metabolic process, GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds",null,null,"Os01g0944500 ","LOC_Os01g71650.1"]
[{"$nulls":30},"Os01g0546100",-1.498763,{"$nulls":83},"_",null,"_","Leucine-rich repeat receptor-like kinase",1," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os01g0132100 ","LOC_Os01g04070.1"]
[{"$nulls":30},"Os12g0596000",-1.5019708,{"$nulls":83},"_","LHY, LHY-like_chr.4, OsMYBR1, MYBR1, OsMYB1R35, MYB1R35","_","LATE ELONGATED HYPOCOTYL, MYB-related transcription factor 1",4," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn,  Other","GO:0009409 - response to cold, GO:0009908 - flower development, GO:0009648 - photoperiodism, GO:0003682 - chromatin binding, GO:0003677 - DNA binding, GO:0005634 - nucleus, GO:0006351 - transcription, DNA-dependent, GO:0006355 - regulation of transcription, DNA-dependent, GO:0009414 - response to water deprivation, GO:0007623 - circadian rhythm","TO:0000303 - cold tolerance, TO:0006002 - proline content, TO:0000340 - total soluble sugar content, TO:0000276 - drought tolerance","PO:0007615 - flower development stage ","Os04g0583900","LOC_Os04g49450.1, LOC_Os04g49450.2"]
[{"$nulls":30},"Os03g0350100",-1.5034013,{"$nulls":83},"_","PR1b","_","pathogenesis-related protein",7," Tolerance and resistance - Disease resistance","GO:0005576 - extracellular region, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os07g0127700 ","LOC_Os07g03600.1"]
[{"$nulls":30},"Os04g0485400",-1.5082155,{"$nulls":83},"_",null,"_","Subtilisin-like protease",9," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0004252 - serine-type endopeptidase activity, GO:0050832 - defense response to fungus","TO:0000074 - blast disease",null,"Os09g0482660 ","LOC_Os09g30458.1"]
[{"$nulls":30},"Os04g0290000",-1.5109512,{"$nulls":83},"_","OsRHP1","_","RING-H2 finger protein 1",8," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0008270 - zinc ion binding, GO:0009738 - abscisic acid mediated signaling, GO:0009651 - response to salt stress","TO:0000276 - drought tolerance, TO:0002667 - abscisic acid content, TO:0006001 - salt tolerance",null,"Os08g0492500 ","LOC_Os08g38460.1"]
[{"$nulls":30},"Os04g0669100",-1.5114392,{"$nulls":83},"_","OsRH50, OsBIRH1","_","RNA helicase 50, BTH-induced RNA helicase 1",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0003724 - RNA helicase activity, GO:0009753 - response to jasmonic acid stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0051707 - response to other organism, GO:0009607 - response to biotic stimulus, GO:0006979 - response to oxidative stress, GO:0071446 - cellular response to salicylic acid stimulus, GO:0071395 - cellular response to jasmonic acid stimulus, GO:0071369 - cellular response to ethylene stimulus, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0016226 - iron-sulfur cluster assembly, GO:0009793 - embryonic development ending in seed dormancy, GO:0009658 - chloroplast organization, GO:0009507 - chloroplast, GO:0006968 - cellular defense response, GO:0006655 - phosphatidylglycerol biosynthetic process, GO:0010103 - stomatal complex morphogenesis, GO:0009817 - defense response to fungus, incompatible interaction, GO:0006399 - tRNA metabolic process, GO:0006364 - rRNA processing, GO:0005524 - ATP binding, GO:0004004 - ATP-dependent RNA helicase activity, GO:0003723 - RNA binding","TO:0000112 - disease resistance, TO:0002657 - oxidative stress",null,"Os03g0108600","LOC_Os03g01830.1"]
[{"$nulls":30},"Os03g0796800",-1.5146896,{"$nulls":83},"CADT1","OsSHM4, SHM4, OsSHMT4, SHMT4, OsSHTM1, SHTM1, OsCADT1","CD TOLERANCE 1","serine hydroxymethyltransferase 4, serine hydroxymethyltransferase-1, Cd tolerance 1",1," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0030170 - pyridoxal phosphate binding, GO:0006563 - L-serine metabolic process, GO:0008168 - methyltransferase activity, GO:0006544 - glycine metabolic process, GO:0004372 - glycine hydroxymethyltransferase activity, GO:0046686 - response to cadmium ion, GO:0005634 - nucleus, GO:0000103 - sulfate assimilation, GO:0008272 - sulfate transport",null,"PO:0009006 - shoot system , PO:0009005 - root ","Os01g0874900","LOC_Os01g65410.1"]
[{"$nulls":30},"Os12g0125300",-1.5221547,{"$nulls":83},"THI29","OsTHI29, OsTHION29, THION29","THIONIN 29","Thionin 29",3," Tolerance and resistance",null,"TO:0000236 - crop damage resistance",null,"Os03g0247200","LOC_Os03g14300.1"]
[{"$nulls":30},"Os06g0658900",-1.5231868,{"$nulls":83},"THI32","OsTHI32, OsTHION32, THION32","THIONIN 32","Thionin 32",9," Tolerance and resistance",null,"TO:0000236 - crop damage resistance",null,"Os09g0409000","LOC_Os09g24350.1"]
[{"$nulls":30},"Os01g0951200",-1.5270141,{"$nulls":83},"_",null,"_","GMC oxidoreductase",10," Tolerance and resistance - Disease resistance",{"$nulls":3},"Os10g0474900","LOC_Os10g33460.1"]
[{"$nulls":30},"Os12g0597600",-1.5284423,{"$nulls":83},"IQM2","OsSTA91, OsIQM2","IQ MOTIF CONTAINING PROTEIN 2","IQ motif containing protein 2",3," Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0009753 - response to jasmonic acid stimulus, GO:0006970 - response to osmotic stress, GO:0005829 - cytosol, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus","TO:0000095 - osmotic response sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0000615 - abscisic acid sensitivity, TO:0006001 - salt tolerance","PO:0009066 - anther ","Os03g0167200","LOC_Os03g07110.1, LOC_Os03g07110.2, LOC_Os03g07110.3"]
[{"$nulls":30},"Os09g0109500",-1.5312132,{"$nulls":83},"NUO","OsNUO","NADH-UBIQUINONE OXIDOREDUCTASE","NADH dehydrogenase (ubiquinone), NADH-ubiquinone oxidoreductase 51 kDa subunit, NADH-ubiquinone oxidoreductase (NUO) 51-kDa subunit of the mitochondrial complex I",7," Biochemical character,  Tolerance and resistance - Disease resistance","GO:0009867 - jasmonic acid mediated signaling pathway, GO:0042742 - defense response to bacterium, GO:0005737 - cytoplasm, GO:0005747 - mitochondrial respiratory chain complex I, GO:0051539 - 4 iron, 4 sulfur cluster binding, GO:0010181 - FMN binding, GO:0051287 - NAD or NADH binding, GO:0008137 - NADH dehydrogenase (ubiquinone) activity","TO:0000175 - bacterial blight disease resistance",null,"Os07g0645400","LOC_Os07g45090.1"]
[{"$nulls":30},"Os11g0216000",-1.5334455,{"$nulls":83},"RPL31","OsRPL31","RIBOSOMAL PROTEIN L31","Ribosomal protein L31",6," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0005886 - plasma membrane, GO:0003735 - structural constituent of ribosome, GO:0005618 - cell wall, GO:0006412 - translation, GO:0009506 - plasmodesma, GO:0009507 - chloroplast, GO:0022625 - cytosolic large ribosomal subunit, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0042742 - defense response to bacterium, GO:0042542 - response to hydrogen peroxide, GO:0009753 - response to jasmonic acid stimulus, GO:0009409 - response to cold, GO:0009751 - response to salicylic acid stimulus","TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000172 - jasmonic acid sensitivity, TO:0000259 - heat tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance","PO:0020031 - radicle , PO:0009009 - plant embryo , PO:0009089 - endosperm , PO:0009006 - shoot system , PO:0009005 - root , PO:0020103 - flag leaf ","Os06g0319700","LOC_Os06g21480.1"]
[{"$nulls":30},"Os03g0775300",-1.5336996,{"$nulls":83},"RPS25","RPS25, RPS25a, OsRPS25, OsRPS25a","RIBOSOMAL PROTEIN S25","Ribosomal protein S25, ribosomal protein small subunit 25, Ribosomal protein S25a, ribosomal protein small subunit 25a",11," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Other","GO:0050832 - defense response to fungus, GO:0005840 - ribosome, GO:0006412 - translation, GO:0009414 - response to water deprivation, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0042542 - response to hydrogen peroxide, GO:0046872 - metal ion binding, GO:0022627 - cytosolic small ribosomal subunit, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus, GO:0003735 - structural constituent of ribosome","TO:0000255 - sheath blight disease resistance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0002657 - oxidative stress, TO:0006001 - salt tolerance, TO:0000175 - bacterial blight disease resistance",null,"Os11g0153800","LOC_Os11g05562.1"]
[{"$nulls":30},"Os06g0594300",-1.5370245,{"$nulls":83},"UBL40-2","UbL40-2, OsUbL40-2","UBIQUITIN FUSION RIBOSOMAL PROTEIN L40-2","Ubiquitin fusion protein, ubiquitin fusion ribosomal protein L40-2",3," Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance,  Reproductive organ - Spikelet, flower, glume, awn","GO:0003735 - structural constituent of ribosome, GO:0005840 - ribosome, GO:0006412 - translation, GO:0009408 - response to heat, GO:0048653 - anther development","TO:0000437 - male sterility, TO:0000259 - heat tolerance","PO:0001004 - anther development stage ","Os03g0259500","LOC_Os03g15370.2, LOC_Os03g15370.1"]
[{"$nulls":30},"Os01g0136600",-1.5373341,{"$nulls":83},"_",null,"_","heat shock protein 90",9," Tolerance and resistance - Stress tolerance"]
[{"$nulls":30},"Os01g0972000",-1.5380784,{"$nulls":83},"MDHAR3","MDHAR, OsMDHAR, OsMDAR3, MDAR3, OsMDHAR3, MDHAR1, OsMDHAR1","MONODEHYDROASCORBATE REDUCTASE 3","cytosolic monodehydroascorbate reductase, monodehydroascorbate reductase",9," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0006979 - response to oxidative stress, GO:0045454 - cell redox homeostasis, GO:0050660 - FAD binding, GO:0010043 - response to zinc ion, GO:0005782 - peroxisomal matrix, GO:0048046 - apoplast, GO:0050832 - defense response to fungus, GO:0032929 - negative regulation of superoxide release, GO:0009610 - response to symbiotic fungus, GO:0005886 - plasma membrane, GO:0009753 - response to jasmonic acid stimulus, GO:0046686 - response to cadmium ion, GO:0009570 - chloroplast stroma, GO:0009742 - brassinosteroid mediated signaling, GO:0009651 - response to salt stress, GO:0005829 - cytosol, GO:0043903 - regulation of symbiosis, encompassing mutualism through parasitism, GO:0016656 - monodehydroascorbate reductase (NADH) activity","TO:0002657 - oxidative stress, TO:0002677 - brassinosteroid sensitivity, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance, TO:0000074 - blast disease",null,"Os09g0567300","LOC_Os09g39380.1"]
[{"$nulls":30},"Os07g0608700",-1.5390383,{"$nulls":83},"PUB4","OsPUB4, OsPUB04","PLANT U-BOX-CONTAINING PROTEIN 4","plant U-box-containing protein 4, U-box protein 4",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0009817 - defense response to fungus, incompatible interaction, GO:0016567 - protein ubiquitination, GO:0009414 - response to water deprivation, GO:0007623 - circadian rhythm, GO:0000151 - ubiquitin ligase complex, GO:0004842 - ubiquitin-protein ligase activity","TO:0000276 - drought tolerance",null,"Os02g0234300","LOC_Os02g13960.1"]
[{"$nulls":30},"Os04g0683100",-1.5407897,{"$nulls":83},"PUB21","OsPUB21","PLANT U-BOX-CONTAINING PROTEIN 21","plant U-box-containing protein 21, U-box protein 21",2," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0004842 - ubiquitin-protein ligase activity, GO:0000151 - ubiquitin ligase complex, GO:0016301 - kinase activity, GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus","TO:0000074 - blast disease, TO:0000276 - drought tolerance",null,"Os02g0727300","LOC_Os02g49520.1"]
[{"$nulls":30},"Os01g0559600",-1.5450315,{"$nulls":83},"PUB37","OsPUB37","PLANT U-BOX-CONTAINING PROTEIN 37","plant U-box-containing protein 37, U-box protein 37",12," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation, GO:0050832 - defense response to fungus, GO:0000151 - ubiquitin ligase complex, GO:0004842 - ubiquitin-protein ligase activity","TO:0000074 - blast disease, TO:0000276 - drought tolerance",null,"Os12g0161100","LOC_Os12g06410.1"]
[{"$nulls":30},"Os07g0515000",-1.5477105,{"$nulls":83},"RLCK93","OsPUB50, PUB50, OsRLCK93","RECEPTOR-LIKE CYTOPLASMIC KINASE 93","plant U-box-containing protein 50, U-box protein 50, Receptor-like Cytoplasmic Kinase 93",3," Biochemical character,  Reproductive organ - panicle,  Tolerance and resistance - Disease resistance","GO:0010229 - inflorescence development, GO:0005524 - ATP binding, GO:0042742 - defense response to bacterium, GO:0004842 - ubiquitin-protein ligase activity, GO:0004674 - protein serine/threonine kinase activity, GO:0000151 - ubiquitin ligase complex, GO:0050832 - defense response to fungus","TO:0000175 - bacterial blight disease resistance, TO:0000621 - inflorescence development trait, TO:0000074 - blast disease","PO:0001083 - inflorescence development stage , PO:0009049 - inflorescence ","Os03g0101200","LOC_Os03g01160.2"]
[{"$nulls":30},"Os11g0586400",-1.5486903,{"$nulls":83},"RLCK305","OsPUB53, PUB53, OsRLCK305, OsMed2_1, Med2_1","RECEPTOR-LIKE CYTOPLASMIC KINASE 305","plant U-box-containing protein 53, U-box protein 53, Receptor-like Cytoplasmic Kinase 305, Mediator 2_1",10," Biochemical character,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0004842 - ubiquitin-protein ligase activity, GO:0004674 - protein serine/threonine kinase activity, GO:0042742 - defense response to bacterium, GO:0000151 - ubiquitin ligase complex, GO:0009611 - response to wounding, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000276 - drought tolerance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease",null,"Os10g0548300","LOC_Os10g40060.1, LOC_Os10g40060.2, LOC_Os10g40060.3, LOC_Os10g40060.4"]
[{"$nulls":30},"Os02g0793300",-1.5516387,{"$nulls":83},"RLCK91","OsPUB62, PUB62, OsRLCK91","RECEPTOR-LIKE CYTOPLASMIC KINASE 91","plant U-box-containing protein 62, U-box protein 62, Receptor-like Cytoplasmic Kinase 91",2," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0000151 - ubiquitin ligase complex, GO:0009609 - response to symbiotic bacterium, GO:0044403 - symbiosis, encompassing mutualism through parasitism, GO:0004842 - ubiquitin-protein ligase activity, GO:0009651 - response to salt stress","TO:0006001 - salt tolerance",null,"Os02g0822900","LOC_Os02g57700.1"]
[{"$nulls":30},"Os10g0523700",-1.5532614,{"$nulls":83},"FLO6","OsSIP4, SIP4, OsFLO6, OsSFq3, SFq3","FLOURY ENDOSPERM 6","FLOURY ENDOSPERM6, SKIP interacting protein 4, SKIPa-interacting protein 4, SKIPa-interacting protein 4",3," Reproductive organ - Pollination, fertilization, fertility,  Seed - Physiological traits - Storage substances,  Tolerance and resistance - Stress tolerance","GO:0007165 - signal transduction, GO:0009536 - plastid, GO:0009408 - response to heat, GO:0019252 - starch biosynthetic process","TO:0000259 - heat tolerance, TO:0000162 - seed quality, TO:0000696 - starch content, TO:0000180 - spikelet fertility",null,"Os03g0686900","LOC_Os03g48170.1"]
[{"$nulls":30},"Os08g0151500",-1.554184,{"$nulls":83},"PYL/RCAR4","OsPYL/RCAR4, PYL4, OsPYL4, OsPYL6, PYL6","PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 4","pyrabactin resistance-like 4, PYR1-like 6, pyrabactin resistance 1-like 6",3," Vegetative organ - Culm,  Vegetative organ - Root,  Coloration - Chlorophyll,  Seed - Physiological traits - Dormancy,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity,  Reproductive organ - Panicle, Mode of branching","GO:0010427 - abscisic acid binding, GO:0009414 - response to water deprivation, GO:0009845 - seed germination, GO:0009409 - response to cold, GO:0004864 - phosphoprotein phosphatase inhibitor activity, GO:0005737 - cytoplasm, GO:0009738 - abscisic acid mediated signaling, GO:0009651 - response to salt stress, GO:0009737 - response to abscisic acid stimulus, GO:0005829 - cytosol, GO:0005634 - nucleus, GO:0009408 - response to heat, GO:2000033 - regulation of seed dormancy, GO:0045926 - negative regulation of growth, GO:0009415 - response to water, GO:0030104 - water homeostasis, GO:0010118 - stomatal movement, GO:0006970 - response to osmotic stress","TO:0000180 - spikelet fertility, TO:0000227 - root length, TO:0000136 - relative water content, TO:0000576 - stem length, TO:0000040 - panicle length, TO:0002667 - abscisic acid content, TO:0000547 - primary branch number, TO:0000447 - filled grain number, TO:0000396 - grain yield, TO:0000457 - total biomass yield, TO:0000050 - inflorescence branching, TO:0000237 - water stress trait, TO:0000357 - growth and development trait, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000095 - osmotic response sensitivity, TO:0000495 - chlorophyll content, TO:0000605 - hydrogen peroxide content, TO:0000153 - relative yield, TO:0000143 - relative biomass, TO:0000253 - seed dormancy, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000276 - drought tolerance","PO:0020103 - flag leaf , PO:0009006 - shoot system , PO:0009005 - root , PO:0007057 - 0 seed germination stage ","Os03g0297600","LOC_Os03g18600.1"]
[{"$nulls":30},"Os03g0201200",-1.5567735,{"$nulls":83},"_","OsPP2C07, PP2C07, OsPP2C7, PP2C7, OsPP11, PP11","_","protein phosphatase 2C07, protein phosphatase 2C 07, protein phosphatase 2C7, protein phosphatase 2C 7, protein phosphatase 11",1," Tolerance and resistance - Stress tolerance","GO:0004722 - protein serine/threonine phosphatase activity, GO:0046872 - metal ion binding, GO:0009409 - response to cold, GO:0006470 - protein amino acid dephosphorylation","TO:0000303 - cold tolerance",null,"Os01g0618200","LOC_Os01g43100.1"]
[{"$nulls":30},"Os08g0387500",-1.5579563,{"$nulls":83},"XA46","OsPP2C76, PP2C76, OsPP122, PP122, Xa46(t), Xa46, Doa, OsDoa","XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 46","protein phosphatase 2C76, protein phosphatase 2C 76, protein phosphatase 122, serine/threonine-protein kinase Doa, STPK Doa",11," Tolerance and resistance - Disease resistance","GO:0004672 - protein kinase activity, GO:0046872 - metal ion binding, GO:0042742 - defense response to bacterium, GO:0004721 - phosphoprotein phosphatase activity, GO:0005524 - ATP binding","TO:0000175 - bacterial blight disease resistance",null,"Os11g0586100","LOC_Os11g37540.1"]
[{"$nulls":30},"Os03g0839900",-1.5584296,{"$nulls":83},"YGL10","CAO, CAO1, OsCAO1, Oslls1, Lls1, DVR, PGL","YELLOW-GREEN LEAF 10","chlorophyll a oxygenase, Chlorophyll a oxygenase 1, chlorophyllide a oxygenate 1, Lls1-homologue of maize, \\3, 8-divinyl chlorophyllide a 8-vinyl reductase\\\", pale green leaf, yellow green leaf 10\"",10," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Chlorophyll,  Seed - Morphological traits - Grain shape,  Seed - Physiological traits,  Tolerance and resistance - Lesion mimic,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Grain quality,  Character as QTL - Yield and productivity,  Character as QTL - Plant growth activity","GO:0005506 - iron ion binding, GO:0042542 - response to hydrogen peroxide, GO:0051607 - defense response to virus, GO:0009416 - response to light stimulus, GO:0048366 - leaf development, GO:0046686 - response to cadmium ion, GO:0051537 - 2 iron, 2 sulfur cluster binding, GO:0031969 - chloroplast membrane, GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, GO:0060548 - negative regulation of cell death, GO:0009658 - chloroplast organization, GO:0006952 - defense response, GO:0009645 - response to low light intensity stimulus, GO:0010109 - regulation of photosynthesis, GO:0015996 - chlorophyll catabolic process, GO:0015995 - chlorophyll biosynthetic process, GO:0010277 - chlorophyllide a oxygenase activity, GO:0010150 - leaf senescence, GO:0010027 - thylakoid membrane organization, GO:0009535 - chloroplast thylakoid membrane, GO:0050832 - defense response to fungus, GO:0009408 - response to heat","TO:0000326 - leaf color, TO:0000397 - grain size, TO:0000655 - leaf development trait, TO:0000162 - seed quality, TO:0000293 - chlorophyll-a content, TO:0000259 - heat tolerance, TO:0000148 - viral disease resistance, TO:0000020 - black streak dwarf virus resistance, TO:0000495 - chlorophyll content, TO:0000255 - sheath blight disease resistance, TO:0000460 - light intensity sensitivity, TO:0000075 - light sensitivity, TO:0000457 - total biomass yield, TO:0000396 - grain yield, TO:0000316 - photosynthetic ability, TO:0000196 - amylose content, TO:0000455 - seed set percent, TO:0000590 - grain weight, TO:0001027 - net photosynthetic rate, TO:0000063 - mimic response, TO:0002759 - grain number, TO:0000346 - tiller number, TO:0000249 - leaf senescence, TO:0002757 - flag leaf length, TO:0002758 - flag leaf lamina width, TO:0000295 - chlorophyll-b content, TO:0000207 - plant height, TO:0002715 - chloroplast development trait, TO:0000496 - carotenoid content, TO:0000211 - gel consistency, TO:0000266 - chalky endosperm, TO:0000298 - chlorophyll ratio","PO:0001050 - leaf development stage , PO:0001054 - 4 leaf senescence stage , PO:0025034 - leaf ","Os10g0567400","LOC_Os10g41780.4, LOC_Os10g41780.2, LOC_Os10g41780.3, LOC_Os10g41780.1"]
[{"$nulls":30},"Os02g0817700",-1.5615784,{"$nulls":83},"RAR1","Os RAR1, OsRAR1","_","rice RAR1 ortholog",2," Tolerance and resistance - Disease resistance","GO:0050832 - defense response to fungus, GO:0009816 - defense response to bacterium, incompatible interaction, GO:0051879 - Hsp90 protein binding, GO:0005737 - cytoplasm, GO:0050821 - protein stabilization, GO:0002679 - respiratory burst during defense response, GO:0008270 - zinc ion binding, GO:0009626 - plant-type hypersensitive response, GO:0042742 - defense response to bacterium, GO:0005634 - nucleus","TO:0000112 - disease resistance, TO:0000175 - bacterial blight disease resistance, TO:0000074 - blast disease, TO:0000203 - bacterial leaf streak disease resistance",null,"Os02g0535400","LOC_Os02g33180.1"]
[{"$nulls":30},"Os05g0453300",-1.562294,{"$nulls":83},"RLCK178","OsPti1a, OsRLCK178","RECEPTOR-LIKE CYTOPLASMIC KINASE 178","Pto-interacting protein 1a, Receptor-like Cytoplasmic Kinase 178",5," Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance","GO:0042742 - defense response to bacterium, GO:0009611 - response to wounding, GO:0005524 - ATP binding, GO:0048316 - seed development, GO:0031348 - negative regulation of defense response, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0009626 - plant-type hypersensitive response","TO:0000074 - blast disease, TO:0000653 - seed development trait, TO:0000175 - bacterial blight disease resistance, TO:0000112 - disease resistance","PO:0001170 - seed development stage , PO:0009010 - seed ","Os05g0135800","LOC_Os05g04520.1"]
[{"$nulls":30},"Os01g0300600",-1.5649967,{"$nulls":83},"B12D1","OsB12D1","_","B12D-like protein 1",7," Tolerance and resistance - Stress tolerance","GO:0009873 - ethylene mediated signaling pathway, GO:0009413 - response to flooding, GO:0009845 - seed germination, GO:0009723 - response to ethylene stimulus","TO:0000173 - ethylene sensitivity, TO:0000114 - flooding related trait, TO:0000280 - seedling vigor",null,"Os07g0604700","LOC_Os07g41350.1"]
[{"$nulls":30},"Os05g0490000",-1.5656859,{"$nulls":83},"HMS1","CER6/CUT1, CER6, CUT1, OsCER6, WSL4, KCS6, OsKCS6, CER6/CUT1/KCS6, OsHMS1","HUMIDITY-SENSITIVE GENIC MALE STERILITY 1","eceriferum6, eceriferum 6, cuticular 1, wax crystal-sparse leaf 4, beta-ketoacyl-coenzyme A synthase 6, beta-ketoacyl-CoA synthase 6",3," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Reproductive organ - Pollination, fertilization, fertility - Male sterility,  Tolerance and resistance - Stress tolerance","GO:0009270 - response to humidity, GO:0048653 - anther development, GO:0010584 - pollen exine formation, GO:0010208 - pollen wall assembly, GO:0009414 - response to water deprivation, GO:0005783 - endoplasmic reticulum, GO:0009846 - pollen germination, GO:0009876 - pollen adhesion, GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups, GO:0016020 - membrane, GO:0006633 - fatty acid biosynthetic process, GO:0009859 - pollen hydration, GO:0010025 - wax biosynthetic process, GO:0009860 - pollen tube growth, GO:0042761 - very-long-chain fatty acid biosynthetic process, GO:0009555 - pollen development","TO:0000276 - drought tolerance, TO:0000180 - spikelet fertility, TO:0000346 - tiller number, TO:0000455 - seed set percent, TO:0000199 - genic male sterility, TO:0000604 - fat and essential oil content, TO:0000441 - humidity related trait, TO:0000207 - plant height","PO:0001007 - pollen development stage , PO:0009071 - anther wall tapetum , PO:0009066 - anther , PO:0001004 - anther development stage , PO:0025386 - cuticular wax ","Os03g0220100","LOC_Os03g12030.1"]
[{"$nulls":30},"Os02g0784900",-1.5692786,{"$nulls":83},"_","OsHSP70, hsp70, OsMed37_4, Med37_4","_","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, Mediator 37_4",3," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009615 - response to virus, GO:0006950 - response to stress","TO:0000148 - viral disease resistance",null,"Os03g0821100","LOC_Os03g60620.1"]
[{"$nulls":30},"Os05g0534000",-1.5710148,{"$nulls":83},"MC4","OsMC4","METACASPASE 4","Metacaspase 4",5," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0050832 - defense response to fungus, GO:0009408 - response to heat, GO:0004197 - cysteine-type endopeptidase activity, GO:0009414 - response to water deprivation, GO:0009737 - response to abscisic acid stimulus, GO:0042742 - defense response to bacterium, GO:0009651 - response to salt stress, GO:0009751 - response to salicylic acid stimulus, GO:0009409 - response to cold","TO:0000259 - heat tolerance, TO:0000074 - blast disease, TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0006001 - salt tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000303 - cold tolerance",null,"Os05g0496400","LOC_Os05g41660.1"]
[{"$nulls":30},"Os08g0386800",-1.572127,{"$nulls":83},"NEF1","Os NEF1, OsNEF1","NO EXINE FORMATION 1","NO EXINE FORMATION1, no exine formation 1",11," Tolerance and resistance - Stress tolerance","GO:0009414 - response to water deprivation","TO:0000276 - drought tolerance",null,"Os11g0528200 ","LOC_Os11g32470.1"]
[{"$nulls":30},"Os11g0441500",-1.5760497,{"$nulls":83},"SAP4","OsSAP4","STRESS ASSOCIATED PROTEIN GENE 4","stress-associated protein 4",2," Tolerance and resistance - Stress tolerance","GO:0003677 - DNA binding, GO:0009414 - response to water deprivation, GO:0009408 - response to heat, GO:0009651 - response to salt stress, GO:0006950 - response to stress, GO:0009611 - response to wounding, GO:0009753 - response to jasmonic acid stimulus","TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0000164 - stress trait, TO:0000259 - heat tolerance, TO:0000276 - drought tolerance","PO:0001170 - seed development stage ","Os02g0195600","LOC_Os02g10200.1, LOC_Os02g10200.2"]
[{"$nulls":30},"Os03g0711400",-1.5805225,{"$nulls":83},"SAP14","OsSAP14","STRESS ASSOCIATED PROTEIN GENE 14","stress-associated protein 14",3," Tolerance and resistance - Stress tolerance","GO:0009409 - response to cold, GO:0009414 - response to water deprivation, GO:0006950 - response to stress, GO:0008270 - zinc ion binding, GO:0042542 - response to hydrogen peroxide, GO:0009651 - response to salt stress","TO:0000303 - cold tolerance, TO:0000164 - stress trait, TO:0006001 - salt tolerance, TO:0000276 - drought tolerance",null,"Os03g0793300","LOC_Os03g57920.1"]
[{"$nulls":30},"Os07g0249700",-1.5825682,{"$nulls":83},"VTE2","OsVTE2, SGD1, OsSGD1, RTD1, OsRTD1, OsHPT, HPT","VITAMIN E DEFICIENT 2","VITAMIN E DEFICIENT 2, small grain and dwarf1, small grain and dwarf 1, Rice tocopherol de chancy 1, homogentisate phytyltransferase",6," Biochemical character,  Vegetative organ - Culm,  Seed - Morphological traits,  Tolerance and resistance - Stress tolerance","GO:0033231 - carbohydrate export, GO:0006636 - unsaturated fatty acid biosynthetic process, GO:0006546 - glycine catabolic process, GO:0000096 - sulfur amino acid metabolic process, GO:0016021 - integral to membrane, GO:0019216 - regulation of lipid metabolic process, GO:0019288 - isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, GO:0019748 - secondary metabolic process, GO:0009117 - nucleotide metabolic process, GO:0031347 - regulation of defense response, GO:0009535 - chloroplast thylakoid membrane, GO:0009416 - response to light stimulus, GO:0031408 - oxylipin biosynthetic process, GO:0009409 - response to cold, GO:0009507 - chloroplast, GO:0009739 - response to gibberellin stimulus, GO:0009106 - lipoate metabolic process, GO:0009740 - gibberellic acid mediated signaling, GO:0009266 - response to temperature stimulus, GO:0009108 - coenzyme biosynthetic process, GO:0006979 - response to oxidative stress, GO:0008652 - cellular amino acid biosynthetic process, GO:0009072 - aromatic amino acid family metabolic process, GO:0045893 - positive regulation of transcription, DNA-dependent, GO:0044272 - sulfur compound biosynthetic process, GO:0009826 - unidimensional cell growth, GO:0006733 - oxidoreduction coenzyme metabolic process, GO:0009965 - leaf morphogenesis, GO:0009695 - jasmonic acid biosynthetic process, GO:0010176 - homogentisate phytyltransferase activity, GO:0010189 - vitamin E biosynthetic process, GO:0015994 - chlorophyll metabolic process, GO:0009915 - phloem loading, GO:0030154 - cell differentiation","TO:0000340 - total soluble sugar content, TO:0002657 - oxidative stress, TO:0000435 - seed longevity, TO:0000152 - panicle number, TO:0000456 - spikelet number, TO:0000145 - internode length, TO:0002637 - leaf size, TO:0006032 - panicle size, TO:0000382 - 1000-seed weight, TO:0000397 - grain size, TO:0000207 - plant height, TO:0000303 - cold tolerance, TO:0000346 - tiller number, TO:0000075 - light sensitivity, TO:0000592 - 1000-dehulled grain weight, TO:0000399 - grain thickness, TO:0000734 - grain length, TO:0000565 - spikelets per panicle length, TO:0000040 - panicle length, TO:0000166 - gibberellic acid sensitivity","PO:0006001 - phyllome ","Os06g0658900","LOC_Os06g44840.1, LOC_Os06g44840.2"]
[{"$nulls":30},"Os10g0413500",-1.5848917,{"$nulls":83},"RLCK25","OsRLCK25","RECEPTOR-LIKE CYTOPLASMIC KINASE 25","Receptor-like Cytoplasmic Kinase 25",1," Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0010332 - response to gamma radiation, GO:0009651 - response to salt stress, GO:0050832 - defense response to fungus, GO:0004674 - protein serine/threonine kinase activity, GO:0016021 - integral to membrane, GO:0009414 - response to water deprivation, GO:0005524 - ATP binding","TO:0000074 - blast disease, TO:0000276 - drought tolerance, TO:0000161 - radiation response trait, TO:0006001 - salt tolerance",null,"Os01g0152800","LOC_Os01g05960.1"]
[{"$nulls":30},"Os05g0413575",-1.587397,{"$nulls":83},"_","UGT","_","flavone C-pentosyltransferase, UDP-glucuronosyl/UDP-glucosyl transferase family protein",6," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0016758 - transferase activity, transferring hexosyl groups, GO:0042594 - response to starvation","TO:0000011 - nitrogen sensitivity",null,"Os06g0289200","LOC_Os06g18140.1"]
[{"$nulls":30},"Os04g0519900",-1.5889579,{"$nulls":83},"TDC6","OsTDC6","TRYPTOPHAN DECARBOXYLASE 6","Decarboxylase, tryptophan decarboxylase 6",10," Biochemical character,  Tolerance and resistance - Stress tolerance","GO:0005737 - cytoplasm, GO:0016831 - carboxy-lyase activity, GO:0006520 - cellular amino acid metabolic process, GO:0009416 - response to light stimulus, GO:0030170 - pyridoxal phosphate binding","TO:0000075 - light sensitivity",null,"Os10g0380800","LOC_Os10g23900.1"]
[{"$nulls":30},"Os02g0102400",-1.5906243,{"$nulls":83},"ACBP2","OsACBP2","ACYL-COA-BINDING PROTEIN 2","Acyl-CoA-binding protein 2",6," Biochemical character,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance","GO:0000062 - acyl-CoA binding, GO:0008289 - lipid binding, GO:0009409 - response to cold, GO:0009611 - response to wounding, GO:0050832 - defense response to fungus, GO:0005829 - cytosol","TO:0000074 - blast disease, TO:0000303 - cold tolerance","PO:0007010 - whole plant fruit ripening stage , PO:0025034 - leaf ","Os06g0115300","LOC_Os06g02490.1"]
[{"$nulls":30},"Os04g0438000",-1.5929691,{"$nulls":83},"_","OsZFP6, ZFP6","_","CCHC-type zinc finger protein 6",2," Tolerance and resistance - Stress tolerance","GO:0003676 - nucleic acid binding, GO:0009628 - response to abiotic stimulus","TO:0000168 - abiotic stress trait",null,"Os02g0552700","LOC_Os02g34760.1"]
[{"$nulls":30},"Os02g0213100",-1.5944697,{"$nulls":83},"_","SIT2","_","Salt Intolerance 2",4," Tolerance and resistance - Stress tolerance","GO:0005524 - ATP binding, GO:0009651 - response to salt stress, GO:0004674 - protein serine/threonine kinase activity","TO:0006001 - salt tolerance",null,"Os04g0531400","LOC_Os04g44900.1"]
[{"$nulls":30},"Os09g0572400",-1.5966276,{"$nulls":83},"_","OsEnS-25, DEFL2, OsDEFL2, OsDf-02, Df-02","_","endosperm-specific gene 25, defensin-like 2",2," Tolerance and resistance","GO:0006952 - defense response",null,null,"Os02g0171500","LOC_Os02g07550.1"]
[{"$nulls":30},"Os03g0200200",-1.598349,{"$nulls":83},"RLCK267","OsRLCK267, OsRPK1, RPK1, OsMRLP15, MRLP15, OsCBM1, CBM1","RECEPTOR-LIKE CYTOPLASMIC KINASE 267","Receptor-like Cytoplasmic Kinase 267, receptor protein kinase 1, malectin/malectin-like receptor-like protein 15, Carbohydrate-Binding Malectin-Like Protein 1, Carbohydrate-binding malectin/malectin-like domain-containing protein 1",9," Vegetative organ - Culm,  Reproductive organ - Panicle, Mode of branching,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Stress tolerance,  Character as QTL - Yield and productivity","GO:0030104 - water homeostasis, GO:0010118 - stomatal movement, GO:0009408 - response to heat, GO:0009409 - response to cold, GO:0006979 - response to oxidative stress, GO:0009651 - response to salt stress, GO:0009753 - response to jasmonic acid stimulus, GO:0009739 - response to gibberellin stimulus, GO:0009751 - response to salicylic acid stimulus, GO:0009737 - response to abscisic acid stimulus, GO:0005886 - plasma membrane, GO:0005783 - endoplasmic reticulum, GO:0050665 - hydrogen peroxide biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009414 - response to water deprivation","TO:0000175 - bacterial blight disease resistance, TO:0000276 - drought tolerance, TO:0000615 - abscisic acid sensitivity, TO:0000166 - gibberellic acid sensitivity, TO:0000172 - jasmonic acid sensitivity, TO:0006001 - salt tolerance, TO:0002657 - oxidative stress, TO:0000303 - cold tolerance, TO:0000259 - heat tolerance, TO:0000207 - plant height, TO:0000346 - tiller number, TO:0000447 - filled grain number, TO:0000040 - panicle length, TO:0000014 - panicle weight, TO:0000522 - stomatal conductance, TO:0000520 - stomatal closure rate, TO:0000547 - primary branch number, TO:0000566 - stomatal frequency","PO:0025034 - leaf ",null,"LOC_Os09g19380.1"]
[{"$nulls":30},"Os10g0561200",-1.6025711,{"$nulls":83},"PAL1","OsPAL, Pal1*, Pal1, PAL, Pal_1, PalI, PAL2, OsPAL01, PAL01, OSPAL, CP-1, GP-1, OsPAL1, PAL3, OsPAL3","PHENYLALANINE AMMONIA-LYASE 1","phenylalanine ammonia-lyase, phenylalanine ammonia lyase 1, Phe ammonia lyase 1",2," Biochemical character,  Vegetative organ - Leaf,  Vegetative organ - Culm,  Coloration - Anthocyanin,  Seed,  Tolerance and resistance,  Tolerance and resistance - Disease resistance,  Tolerance and resistance - Insect resistance,  Tolerance and resistance - Stress tolerance","GO:0009697 - salicylic acid biosynthetic process, GO:0009411 - response to UV, GO:0009408 - response to heat, GO:0016211 - ammonia ligase activity, GO:0005737 - cytoplasm, GO:0006559 - L-phenylalanine catabolic process, GO:0009718 - anthocyanin biosynthetic process, GO:0009834 - secondary cell wall biogenesis, GO:0010266 - response to vitamin B1, GO:0046688 - response to copper ion, GO:0009809 - lignin biosynthetic process, GO:0042742 - defense response to bacterium, GO:0009751 - response to salicylic acid stimulus, GO:0009058 - biosynthetic process, GO:0009698 - phenylpropanoid metabolic process, GO:0009807 - lignan biosynthetic process, GO:0009753 - response to jasmonic acid stimulus, GO:0016841 - ammonia-lyase activity, GO:0002237 - response to molecule of bacterial origin, GO:0009642 - response to light intensity, GO:0009635 - response to herbicide, GO:0002213 - defense response to insect, GO:0009814 - defense response, incompatible interaction, GO:0048316 - seed development","TO:0000021 - copper sensitivity, TO:0000011 - nitrogen sensitivity, TO:0000051 - stem strength, TO:0000460 - light intensity sensitivity, TO:0000058 - herbicide sensitivity, TO:0000653 - seed development trait, TO:0000074 - blast disease, TO:0000731 - lignin content, TO:0000733 - lignin biosynthesis trait, TO:0000624 - allelopathic effect, TO:0000160 - UV light sensitivity, TO:0000031 - silicon sensitivity, TO:0000175 - bacterial blight disease resistance, TO:0000424 - brown planthopper resistance, TO:0000259 - heat tolerance, TO:0000326 - leaf color","PO:0001170 - seed development stage ","Os02g0626100","LOC_Os02g41630.2"]
[{"$nulls":30},"Os01g0546500",-1.6057011]
[{"$nulls":30},"Os04g0541700",-1.6064421]
[{"$nulls":30},"Os06g0498500",-1.6118513]
[{"$nulls":30},"Os01g0200500",-1.614117]
[{"$nulls":30},"Os09g0431050",-1.6182889]
[{"$nulls":30},"Os03g0227000",-1.6218687]
[{"$nulls":30},"Os03g0741100",-1.6245098]
[{"$nulls":30},"Os07g0195400",-1.6255544]
[{"$nulls":30},"Os01g0511300",-1.6301805]
[{"$nulls":30},"Os03g0826000",-1.6302241]
[{"$nulls":30},"Os02g0829400",-1.6387438]
[{"$nulls":30},"Os03g0807900",-1.6401609]
[{"$nulls":30},"Os02g0227200",-1.6443487]
[{"$nulls":30},"Os03g0745500",-1.6459421]
[{"$nulls":30},"Os08g0461000",-1.6480055]
[{"$nulls":30},"Os09g0517700",-1.6513873]
[{"$nulls":30},"Os01g0115900",-1.6581678]
[{"$nulls":30},"Os05g0104800",-1.66055]
[{"$nulls":30},"Os02g0218200",-1.6614949]
[{"$nulls":30},"Os01g0889400",-1.6627002]
[{"$nulls":30},"Os11g0105400",-1.6673452]
[{"$nulls":30},"Os07g0670600",-1.671342]
[{"$nulls":30},"Os02g0617900",-1.6722897]
[{"$nulls":30},"Os03g0737200",-1.6777977]
[{"$nulls":30},"Os03g0837800",-1.6783649]
[{"$nulls":30},"Os01g0955100",-1.683084]
[{"$nulls":30},"Os01g0118000",-1.6866621]
[{"$nulls":30},"Os06g0146800",-1.6895334]
[{"$nulls":30},"Os04g0107500",-1.6925992]
[{"$nulls":30},"Os02g0146600",-1.696715]
[{"$nulls":30},"Os06g0192600",-1.7003927]
[{"$nulls":30},"Os04g0682800",-1.7016783]
[{"$nulls":30},"Os07g0207301",-1.7040462]
[{"$nulls":30},"Os08g0176900",-1.7066787]
[{"$nulls":30},"Os01g0978400",-1.709232]
[{"$nulls":30},"Os09g0465500",-1.7120256]
[{"$nulls":30},"Os02g0497700",-1.7126619]
[{"$nulls":30},"Os12g0280801",-1.719006]
[{"$nulls":30},"Os03g0737100",-1.7194446]
[{"$nulls":30},"Os08g0101800",-1.7222543]
[{"$nulls":30},"Os05g0160600",-1.728187]
[{"$nulls":30},"Os02g0750500",-1.7303891]
[{"$nulls":30},"Os05g0320700",-1.7367069]
[{"$nulls":30},"Os01g0925100",-1.740313]
[{"$nulls":30},"Os07g0613800",-1.7408199]
[{"$nulls":30},"Os01g0970700",-1.7461704]
[{"$nulls":30},"Os02g0199900",-1.7552341]
[{"$nulls":30},"Os05g0405400",-1.7576853]
[{"$nulls":30},"Os07g0123000",-1.7598467]
[{"$nulls":30},"Os05g0526800",-1.7599626]
[{"$nulls":30},"Os12g0556400",-1.7676135]
[{"$nulls":30},"Os10g0420000",-1.7704498]
[{"$nulls":30},"Os01g0547600",-1.7720733]
[{"$nulls":30},"Os12g0132000",-1.778346]
[{"$nulls":30},"Os03g0410100",-1.7810755]
[{"$nulls":30},"Os11g0463600",-1.787105]
[{"$nulls":30},"Os06g0652300",-1.7968775]
[{"$nulls":30},"Os04g0488700",-1.8002845]
[{"$nulls":30},"Os11g0549900",-1.8041687]
[{"$nulls":30},"Os01g0733200",-1.8073872]
[{"$nulls":30},"Os04g0581300",-1.8091316]
[{"$nulls":30},"Os03g0310800",-1.812733]
[{"$nulls":30},"Os05g0395300",-1.8155246]
[{"$nulls":30},"Os08g0406700",-1.8159965]
[{"$nulls":30},"Os08g0138900",-1.8200182]
[{"$nulls":30},"Os01g0339900",-1.8240961]
[{"$nulls":30},"Os06g0266000",-1.8273282]
[{"$nulls":30},"Os09g0451500",-1.8293775]
[{"$nulls":30},"Os07g0175100",-1.831513]
[{"$nulls":30},"Os05g0150900",-1.8349595]
[{"$nulls":30},"Os02g0714300",-1.8385254]
[{"$nulls":30},"Os07g0246200",-1.8407364]
[{"$nulls":30},"Os04g0509200",-1.8488313]
[{"$nulls":30},"Os01g0875400",-1.8496531]
[{"$nulls":30},"Os04g0183300",-1.8551596]
[{"$nulls":30},"Os02g0827900",-1.8583059]
[{"$nulls":30},"Os03g0408600",-1.85879]
[{"$nulls":30},"Os07g0516300",-1.8637333]
[{"$nulls":30},"Os02g0190300",-1.8708891]
[{"$nulls":30},"Os07g0661100",-1.8714536]
[{"$nulls":30},"Os06g0202400",-1.8743134]
[{"$nulls":30},"Os12g0579450",-1.8788677]
[{"$nulls":30},"Os01g0120600",-1.8835164]
[{"$nulls":30},"Os02g0824600",-1.891836]
[{"$nulls":30},"Os12g0179800",-1.8956517]
[{"$nulls":30},"Os08g0387700",-1.8972697]
[{"$nulls":30},"Os11g0672800",-1.9019443]
[{"$nulls":30},"Os03g0255500",-1.9026088]
[{"$nulls":30},"Os10g0508500",-1.9046679]
[{"$nulls":30},"Os02g0692700",-1.9075446]
[{"$nulls":30},"Os12g0210300",-1.9130135]
[{"$nulls":30},"Os02g0776800",-1.9194078]
[{"$nulls":30},"Os04g0470500",-1.9236321]
[{"$nulls":30},"Os10g0525500",-1.9302949]
[{"$nulls":30},"Os02g0285900",-1.9363408]
[{"$nulls":30},"Os06g0542100",-1.9389864]
[{"$nulls":30},"Os12g0581300",-1.9431459]
[{"$nulls":30},"Os05g0169200",-1.9475688]
[{"$nulls":30},"Os01g0864500",-1.9488407]
[{"$nulls":30},"Os02g0166200",-1.9533892]
[{"$nulls":30},"Os04g0587400",-1.9545015]
[{"$nulls":30},"Os04g0431100",-1.9611449]
[{"$nulls":30},"Os01g0165800",-1.9657445]
[{"$nulls":30},"Os01g0557500",-1.9691057]
[{"$nulls":30},"Os05g0508500",-1.9739984]
[{"$nulls":30},"Os03g0287100",-1.9793206]
[{"$nulls":30},"Os06g0625500",-1.9860936]
[{"$nulls":30},"Os02g0717700",-1.9944032]
[{"$nulls":30},"Os03g0217000",-1.9959841]
[{"$nulls":30},"Os01g0796400",-2.000273]
[{"$nulls":30},"Os01g0356400",-2.0075624]
[{"$nulls":30},"Os02g0784700",-2.0128922]
[{"$nulls":30},"Os03g0146400",-2.0158217]
[{"$nulls":30},"Os01g0976800",-2.0206013]
[{"$nulls":30},"Os08g0455800",-2.021084]
[{"$nulls":30},"Os02g0828200",-2.0260427]
[{"$nulls":30},"Os02g0462500",-2.0319486]
[{"$nulls":30},"Os04g0662700",-2.0392787]
[{"$nulls":30},"Os01g0528800",-2.0452406]
[{"$nulls":30},"Os01g0715800",-2.0506814]
[{"$nulls":30},"Os01g0160800",-2.0618272]
[{"$nulls":30},"Os05g0432600",-2.0655053]
[{"$nulls":30},"Os05g0156500",-2.0725896]
[{"$nulls":30},"Os08g0112000",-2.0753553]
[{"$nulls":30},"Os04g0670600",-2.0838645]
[{"$nulls":30},"Os01g0538000",-2.0872285]
[{"$nulls":30},"Os02g0712550",-2.095331]
[{"$nulls":30},"Os03g0370500",-2.0975225]
[{"$nulls":30},"Os04g0447566",-2.1034248]
[{"$nulls":30},"Os07g0595700",-2.104158]
[{"$nulls":30},"Os03g0293700",-2.1107233]
[{"$nulls":30},"Os06g0623600",-2.116598]
[{"$nulls":30},"Os04g0111225",-2.123708]
[{"$nulls":30},"Os02g0611400",-2.1261408]
[{"$nulls":30},"Os10g0573800",-2.1338398]
[{"$nulls":30},"Os05g0501600",-2.1371903]
[{"$nulls":30},"Os04g0361500",-2.1447818]
[{"$nulls":30},"Os01g0852900",-2.1459405]
[{"$nulls":30},"Os08g0518200",-2.162414]
[{"$nulls":30},"Os11g0199200",-2.169667]
[{"$nulls":30},"Os11g0513900",-2.1712816]
[{"$nulls":30},"Os07g0630800",-2.1778238]
[{"$nulls":30},"Os06g0343600",-2.1806374]
[{"$nulls":30},"Os05g0586500",-2.185334]
[{"$nulls":30},"Os07g0107800",-2.1946523]
[{"$nulls":30},"Os08g0242900",-2.197089]
[{"$nulls":30},"Os03g0238750",-2.2004817]
[{"$nulls":30},"Os06g0274500",-2.2134187]
[{"$nulls":30},"Os12g0404400",-2.2194135]
[{"$nulls":30},"Os05g0580900",-2.2239113]
[{"$nulls":30},"Os02g0571900",-2.23141]
[{"$nulls":30},"Os10g0502300",-2.2381563]
[{"$nulls":30},"Os02g0820300",-2.2471561]
[{"$nulls":30},"Os03g0385900",-2.2670982]
[{"$nulls":30},"Os06g0611400",-2.2680857]
[{"$nulls":30},"Os03g0143400",-2.2842624]
[{"$nulls":30},"Os01g0901600",-2.289169]
[{"$nulls":30},"Os07g0509800",-2.2966893]
[{"$nulls":30},"Os06g0253100",-2.3089805]
[{"$nulls":30},"Os05g0245700",-2.319591]
[{"$nulls":30},"Os11g0470500",-2.3381186]
[{"$nulls":30},"Os08g0334500",-2.3416936]
[{"$nulls":30},"Os02g0665300",-2.3442624]
[{"$nulls":30},"Os07g0578700",-2.3571208]
[{"$nulls":30},"Os05g0579800",-2.363908]
[{"$nulls":30},"Os10g0413700",-2.3695498]
[{"$nulls":30},"Os07g0162600",-2.3716233]
[{"$nulls":30},"Os02g0580900",-2.3771443]
[{"$nulls":30},"Os07g0188100",-2.3801334]
[{"$nulls":30},"Os01g0951500",-2.389745]
[{"$nulls":30},"Os07g0162400",-2.3909025]
[{"$nulls":30},"Os11g0644800",-2.4111602]
[{"$nulls":30},"Os12g0155100",-2.4170163]
[{"$nulls":30},"Os01g0193900",-2.4264348]
[{"$nulls":30},"Os06g0694200",-2.4355953]
[{"$nulls":30},"Os11g0208900",-2.4443355]
[{"$nulls":30},"Os06g0138200",-2.471784]
[{"$nulls":30},"Os03g0800000",-2.4797857]
[{"$nulls":30},"Os07g0614500",-2.4824865]
[{"$nulls":30},"Os06g0721800",-2.4888887]
[{"$nulls":30},"Os02g0163533",-2.5011032]
[{"$nulls":30},"Os01g0666600",-2.5011196]
[{"$nulls":30},"Os06g0678200",-2.510255]
[{"$nulls":30},"Os09g0435700",-2.5175948]
[{"$nulls":30},"Os01g0954000",-2.5308225]
[{"$nulls":30},"Os09g0464000",-2.564389]
[{"$nulls":30},"Os11g0615800",-2.572808]
[{"$nulls":30},"Os02g0816600",-2.582194]
[{"$nulls":30},"Os01g0876400",-2.6002681]
[{"$nulls":30},"Os07g0540800",-2.604603]
[{"$nulls":30},"Os01g0832600",-2.618396]
[{"$nulls":30},"Os05g0527200",-2.623274]
[{"$nulls":30},"Os11g0630300",-2.6345768]
[{"$nulls":30},"Os08g0521100",-2.634845]
[{"$nulls":30},"Os11g0118300",-2.6425388]
[{"$nulls":30},"Os11g0695800",-2.648055]
[{"$nulls":30},"Os08g0200600",-2.6602502]
[{"$nulls":30},"Os12g0148600",-2.6708126]
[{"$nulls":30},"Os10g0557800",-2.6814]
[{"$nulls":30},"Os06g0150400",-2.683429]
[{"$nulls":30},"Os11g0128600",-2.705673]
[{"$nulls":30},"Os08g0422500",-2.735932]
[{"$nulls":30},"Os11g0660000",-2.7446415]
[{"$nulls":30},"Os06g0551800",-2.755891]
[{"$nulls":30},"Os04g0566700",-2.7701967]
[{"$nulls":30},"Os05g0583400",-2.7751377]
[{"$nulls":30},"Os11g0588100",-2.7786925]
[{"$nulls":30},"Os07g0676900",-2.7899196]
[{"$nulls":30},"Os04g0509500",-2.807955]
[{"$nulls":30},"Os08g0491000",-2.8249998]
[{"$nulls":30},"Os08g0334900",-2.836826]
[{"$nulls":30},"Os06g0160800",-2.8572643]
[{"$nulls":30},"Os02g0572000",-2.8693721]
[{"$nulls":30},"Os01g0839100",-2.8807304]
[{"$nulls":30},"Os07g0643700",-2.8916833]
[{"$nulls":30},"Os11g0557500",-2.9033573]
[{"$nulls":30},"Os09g0357400",-2.9130576]
[{"$nulls":30},"Os04g0254300",-2.933532]
[{"$nulls":30},"Os02g0731900",-2.9409494]
[{"$nulls":30},"Os02g0104100",-2.9555776]
[{"$nulls":30},"Os06g0322400",-2.9683063]
[{"$nulls":30},"Os05g0424300",-2.9878438]
[{"$nulls":30},"Os12g0460100",-3.0044281]
[{"$nulls":30},"Os09g0407300",-3.011938]
[{"$nulls":30},"Os08g0434100",-3.027073]
[{"$nulls":30},"Os03g0765000",-3.0563545]
[{"$nulls":30},"Os01g0154600",-3.0642967]
[{"$nulls":30},"Os03g0314700",-3.0673876]
[{"$nulls":30},"Os01g0385400",-3.0720632]
[{"$nulls":30},"Os03g0618300",-3.073156]
[{"$nulls":30},"Os08g0529100",-3.0774562]
[{"$nulls":30},"Os01g0617600",-3.0829103]
[{"$nulls":30},"Os02g0167100",-3.0835636]
[{"$nulls":30},"Os04g0463400",-3.085598]
[{"$nulls":30},"Os09g0353200",-3.0908887]
[{"$nulls":30},"Os09g0442400",-3.0978746]
[{"$nulls":30},"Os10g0389100",-3.0982761]
[{"$nulls":30},"Os02g0578300",-3.1033208]
[{"$nulls":30},"Os01g0855200",-3.1036093]
[{"$nulls":30},"Os01g0309800",-3.1039765]
[{"$nulls":30},"Os06g0196200",-3.1040876]
[{"$nulls":30},"Os07g0158400",-3.1087902]
[{"$nulls":30},"Os02g0672500",-3.108843]
[{"$nulls":30},"Os05g0197300",-3.1118813]
[{"$nulls":30},"Os01g0635550",-3.112592]
[{"$nulls":30},"Os07g0123100",-3.1272118]
[{"$nulls":30},"Os02g0111200",-3.1353662]
[{"$nulls":30},"Os09g0532000",-3.135744]
[{"$nulls":30},"Os04g0652400",-3.14538]
[{"$nulls":30},"Os03g0848200",-3.1460607]
[{"$nulls":30},"Os03g0571900",-3.148697]
[{"$nulls":30},"Os04g0596300",-3.1492412]
[{"$nulls":30},"Os01g0866400",-3.1494305]
[{"$nulls":30},"Os06g0151800",-3.1576207]
[{"$nulls":30},"Os04g0645200",-3.1668253]
[{"$nulls":30},"Os10g0535800",-3.1692202]
[{"$nulls":30},"Os01g0954500",-3.1740615]
[{"$nulls":30},"Os03g0800200",-3.186422]
[{"$nulls":30},"Os04g0401700",-3.1895149]
[{"$nulls":30},"Os07g0443500",-3.1911008]
[{"$nulls":30},"Os03g0153900",-3.1983287]
[{"$nulls":30},"Os08g0547900",-3.211737]
[{"$nulls":30},"Os08g0485400",-3.226238]
[{"$nulls":30},"Os05g0382400",-3.2406175]
[{"$nulls":30},"Os04g0608600",-3.2435668]
[{"$nulls":30},"Os11g0155600",-3.252697]
[{"$nulls":30},"Os02g0106100",-3.254226]
[{"$nulls":30},"Os06g0494400",-3.2707756]
[{"$nulls":30},"Os12g0638300",-3.279246]
[{"$nulls":30},"Os02g0120500",-3.2845008]
[{"$nulls":30},"Os01g0686200",-3.2911518]
[{"$nulls":30},"Os10g0360100",-3.2967236]
[{"$nulls":30},"Os07g0161900",-3.2977765]
[{"$nulls":30},"Os01g0369700",-3.3110847]
[{"$nulls":30},"Os12g0281300",-3.3200295]
[{"$nulls":30},"Os09g0468300",-3.322183]
[{"$nulls":30},"Os03g0698400",-3.322848]
[{"$nulls":30},"Os10g0190900",-3.3262177]
[{"$nulls":30},"Os08g0434150",-3.3319876]
[{"$nulls":30},"Os04g0608700",-3.3351498]
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[{"$nulls":30},"Os07g0513200",-3.3484707]
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[{"$nulls":30},"Os01g0865400",-3.364117]
[{"$nulls":30},"Os01g0540800",-3.3697443]
[{"$nulls":30},"Os01g0598000",-3.3708603]
[{"$nulls":30},"Os06g0476200",-3.3784473]
[{"$nulls":30},"Os02g0658100",-3.3955724]
[{"$nulls":30},"Os01g0303000",-3.4006052]
[{"$nulls":30},"Os01g0176000",-3.408371]
[{"$nulls":30},"Os01g0376600",-3.408563]
[{"$nulls":30},"Os01g0353400",-3.4098165]
[{"$nulls":30},"Os11g0195600",-3.4132683]
[{"$nulls":30},"Os01g0170600",-3.4193773]
[{"$nulls":30},"Os07g0541500",-3.4250233]
[{"$nulls":30},"Os10g0529500",-3.4261866]
[{"$nulls":30},"Os07g0619400",-3.430105]
[{"$nulls":30},"Os11g0490100",-3.4442463]
[{"$nulls":30},"Os05g0576700",-3.452319]
[{"$nulls":30},"Os03g0765200",-3.4600182]
[{"$nulls":30},"Os06g0318600",-3.4693987]
[{"$nulls":30},"Os02g0162600",-3.477148]
[{"$nulls":30},"Os10g0528400",-3.4883463]
[{"$nulls":30},"Os10g0515200",-3.4951484]
[{"$nulls":30},"Os03g0843800",-3.5002718]
[{"$nulls":30},"Os04g0437300",-3.5041382]
[{"$nulls":30},"Os09g0530300",-3.505236]
[{"$nulls":30},"Os11g0600900",-3.5156631]
[{"$nulls":30},"Os06g0178400",-3.5264187]
[{"$nulls":30},"Os03g0580200",-3.527511]
[{"$nulls":30},"Os10g0117800",-3.5295355]
[{"$nulls":30},"Os02g0119700",-3.5298154]
[{"$nulls":30},"Os02g0755900",-3.5356357]
[{"$nulls":30},"Os07g0666600",-3.5399256]
[{"$nulls":30},"Os09g0461900",-3.560054]
[{"$nulls":30},"Os05g0203800",-3.5836766]
[{"$nulls":30},"Os11g0105300",-3.5851562]
[{"$nulls":30},"Os03g0698350",-3.5863678]
[{"$nulls":30},"Os04g0600200",-3.5897186]
[{"$nulls":30},"Os04g0639200",-3.591582]
[{"$nulls":30},"Os09g0442300",-3.5919762]
[{"$nulls":30},"Os03g0760200",-3.606555]
[{"$nulls":30},"Os12g0567800",-3.6087656]
[{"$nulls":30},"Os08g0364900",-3.623029]
[{"$nulls":30},"Os12g0626500",-3.6279056]
[{"$nulls":30},"Os02g0460200",-3.6377466]
[{"$nulls":30},"Os08g0417100",-3.6380482]
[{"$nulls":30},"Os03g0764900",-3.6407013]
[{"$nulls":30},"Os03g0189400",-3.645768]
[{"$nulls":30},"Os01g0930400",-3.64836]
[{"$nulls":30},"Os04g0286300",-3.6614256]
[{"$nulls":30},"Os01g0227400",-3.6737735]
[{"$nulls":30},"Os06g0599200",-3.67406]
[{"$nulls":30},"Os07g0524300",-3.683651]
[{"$nulls":30},"Os04g0223600",-3.6858149]
[{"$nulls":30},"Os07g0217600",-3.6866255]
[{"$nulls":30},"Os07g0677400",-3.700259]
[{"$nulls":30},"Os06g0215900",-3.716817]
[{"$nulls":30},"Os04g0516600",-3.7181187]
[{"$nulls":30},"Os06g0586000",-3.7205493]
[{"$nulls":30},"Os05g0575000",-3.727555]
[{"$nulls":30},"Os09g0511600",-3.7350152]
[{"$nulls":30},"Os01g0591300",-3.7531452]
[{"$nulls":30},"Os07g0601100",-3.763871]
[{"$nulls":30},"Os08g0538600",-3.779361]
[{"$nulls":30},"Os02g0258800",-3.7989438]
[{"$nulls":30},"Os08g0186200",-3.8109398]
[{"$nulls":30},"Os01g0627500",-3.8154628]
[{"$nulls":30},"Os01g0179600",-3.825757]
[{"$nulls":30},"Os03g0215400",-3.8352463]
[{"$nulls":30},"Os10g0344500",-3.8477032]
[{"$nulls":30},"Os09g0447300",-3.8730564]
[{"$nulls":30},"Os12g0514000",-3.8762538]
[{"$nulls":30},"Os03g0183200",-3.8856087]
[{"$nulls":30},"Os01g0120400",-3.9003208]
[{"$nulls":30},"Os01g0847700",-3.913067]
[{"$nulls":30},"Os04g0121800",-3.9259002]
[{"$nulls":30},"Os03g0575200",-3.927727]
[{"$nulls":30},"Os07g0683200",-3.9387996]
[{"$nulls":30},"Os11g0118400",-3.94767]
[{"$nulls":30},"Os01g0869400",-3.9487731]
[{"$nulls":30},"Os05g0572000",-3.9512386]
[{"$nulls":30},"Os08g0355400",-3.9590683]
[{"$nulls":30},"Os12g0629700",-3.9665215]
[{"$nulls":30},"Os03g0168200",-3.976803]
[{"$nulls":30},"Os01g0638000",-3.987046]
[{"$nulls":30},"Os04g0437900",-3.9928997]
[{"$nulls":30},"Os03g0673400",-3.9990282]
[{"$nulls":30},"Os06g0216000",-4.022122]
[{"$nulls":30},"Os02g0783700",-4.0521126]
[{"$nulls":30},"Os06g0267900",-4.0595117]
[{"$nulls":30},"Os01g0176900",-4.0642757]
[{"$nulls":30},"Os11g0209000",-4.067771]
[{"$nulls":30},"Os12g0555500",-4.0764995]
[{"$nulls":30},"Os10g0515100",-4.0774612]
[{"$nulls":30},"Os10g0578800",-4.08017]
[{"$nulls":30},"Os10g0528100",-4.0861135]
[{"$nulls":30},"Os09g0419100",-4.0911837]
[{"$nulls":30},"Os04g0320700",-4.093309]
[{"$nulls":30},"Os01g0919800",-4.09928]
[{"$nulls":30},"Os01g0532300",-4.103605]
[{"$nulls":30},"Os10g0490800",-4.1116633]
[{"$nulls":30},"Os01g0944900",-4.1486545]
[{"$nulls":30},"Os01g0692100",-4.1570225]
[{"$nulls":30},"Os10g0365200",-4.1610894]
[{"$nulls":30},"Os04g0321100",-4.168005]
[{"$nulls":30},"Os11g0506800",-4.168722]
[{"$nulls":30},"Os01g0224700",-4.1785526]
[{"$nulls":30},"Os05g0163700",-4.1810117]
[{"$nulls":30},"Os03g0188100",-4.185099]
[{"$nulls":30},"Os01g0963000",-4.1902757]
[{"$nulls":30},"Os04g0657300",-4.2176423]
[{"$nulls":30},"Os06g0150300",-4.224047]
[{"$nulls":30},"Os11g0552000",-4.2306466]
[{"$nulls":30},"Os12g0484600",-4.2316785]
[{"$nulls":30},"Os08g0404000",-4.2427387]
[{"$nulls":30},"Os02g0580500",-4.25207]
[{"$nulls":30},"Os01g0945300",-4.253978]
[{"$nulls":30},"Os02g0574100",-4.260303]
[{"$nulls":30},"Os07g0209100",-4.2637835]
[{"$nulls":30},"Os06g0216200",-4.2638373]
[{"$nulls":30},"Os05g0527100",-4.2682643]
[{"$nulls":30},"Os07g0489200",-4.27325]
[{"$nulls":30},"Os02g0591600",-4.3057137]
[{"$nulls":30},"Os07g0638400",-4.3782697]
[{"$nulls":30},"Os10g0528200",-4.3877435]
[{"$nulls":30},"Os01g0223900",-4.4340034]
[{"$nulls":30},"Os09g0421700",-4.4692326]
[{"$nulls":30},"Os01g0597800",-4.481426]
[{"$nulls":30},"Os08g0153900",-4.4989095]
[{"$nulls":30},"Os09g0437500",-4.4994864]
[{"$nulls":30},"Os04g0480700",-4.5200276]
[{"$nulls":30},"Os01g0187200",-4.5258584]
[{"$nulls":30},"Os03g0574900",-4.527246]
[{"$nulls":30},"Os10g0529700",-4.5457687]
[{"$nulls":30},"Os01g0952800",-4.5512953]
[{"$nulls":30},"Os07g0123200",-4.5609803]
[{"$nulls":30},"Os11g0214700",-4.5700326]
[{"$nulls":30},"Os10g0568900",-4.5725036]
[{"$nulls":30},"Os01g0934800",-4.588695]
[{"$nulls":30},"Os04g0581000",-4.6551485]
[{"$nulls":30},"Os03g0663500",-4.6817875]
[{"$nulls":30},"Os10g0101100",-4.7255325]
[{"$nulls":30},"Os02g0194700",-4.7441564]
[{"$nulls":30},"Os08g0508000",-4.756021]
[{"$nulls":30},"Os09g0517900",-4.7632484]
[{"$nulls":30},"Os09g0491852",-4.765236]
[{"$nulls":30},"Os04g0565400",-4.778893]
[{"$nulls":30},"Os01g0975900",-4.8031716]
[{"$nulls":30},"Os06g0216300",-4.8205605]
[{"$nulls":30},"Os10g0491000",-4.852097]
[{"$nulls":30},"Os02g0101500",-4.8936963]
[{"$nulls":30},"Os04g0339400",-4.896852]
[{"$nulls":30},"Os09g0454600",-4.911054]
[{"$nulls":30},"Os04g0338100",-5.071007]
[{"$nulls":30},"Os08g0112300",-5.082199]
[{"$nulls":30},"Os04g0556400",-5.086895]
[{"$nulls":30},"Os08g0139700",-5.1084228]
[{"$nulls":30},"Os05g0215300",-5.1862445]
[{"$nulls":30},"Os10g0368100",-5.1970024]
[{"$nulls":30},"Os05g0196100",-5.2295537]
[{"$nulls":30},"Os07g0418500",-5.2721844]
[{"$nulls":30},"Os11g0540600",-5.275355]
[{"$nulls":30},"Os02g0704000",-5.3020196]
[{"$nulls":30},"Os10g0456100",-5.3094206]
[{"$nulls":30},"Os01g0114600",-5.372951]
[{"$nulls":30},"Os01g0800500",-5.3757]
[{"$nulls":30},"Os10g0344000",-5.427044]
[{"$nulls":30},"Os05g0366800",-5.4285493]
[{"$nulls":30},"Os10g0138100",-5.4318986]
[{"$nulls":30},"Os10g0166600",-5.452]
[{"$nulls":30},"Os06g0507300",-5.454693]
[{"$nulls":30},"Os02g0569900",-5.477722]
[{"$nulls":30},"Os05g0122700",-5.4888015]
[{"$nulls":30},"Os01g0116400",-5.5128293]
[{"$nulls":30},"Os02g0318100",-5.5715528]
[{"$nulls":30},"Os07g0162100",-5.604032]
[{"$nulls":30},"Os02g0188000",-5.692103]
[{"$nulls":30},"Os07g0643000",-5.723293]
[{"$nulls":30},"Os05g0366600",-5.742953]
[{"$nulls":30},"Os09g0518200",-5.8301454]
[{"$nulls":30},"Os02g0513100",-5.8503895]
[{"$nulls":30},"Os05g0331200",-5.9309177]
[{"$nulls":30},"Os05g0527000",-5.968256]
[{"$nulls":30},"Os03g0154000",-5.9937706]
[{"$nulls":30},"Os09g0552600",-6.043594]
[{"$nulls":30},"Os03g0604566",-6.2136235]
[{"$nulls":30},"Os03g0604500",-6.2136235]
[{"$nulls":30},"Os06g0228500",-6.315272]
[{"$nulls":30},"Os04g0282400",-6.613068]
[{"$nulls":30},"Os03g0228200",-6.6322503]
[{"$nulls":30},"Os08g0507100",-6.6912026]
[{"$nulls":30},"Os10g0528300",-7.870001]
[{"$nulls":30},"Os07g0529000",-7.9519114]
[{"$nulls":30},"Os08g0174100",-8.1550455]
[{"$nulls":30},"Os09g0367700",-8.1796]

{"sheet":"Table S8 CropPAL2.0","index":7,"n_rows":4362,"n_cols":25,"rows_kept":2250,"cut":true,"merged":[[2,0,2,7],[2,8,2,21]],"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1}}
["Supplementary Table S8. Prediction of subcellular localization for DEGs using CropPAL2.0"]
[]
["Protein Properties",{"$nulls":7},"Location Predictors",{"$nulls":13},"Location Experiments","Publications and PubMed ID","Other References"]
["Gene","Crop","Description","Chromosome","Amino Acid Residues","Molecular Weight","Isoelectric Point","GRAVY","Winner Takes All","Any Predictor","BaCelLo","ChloroP","EpiLoc","iPSORT","MultiLoc","Plant-mPloc","Predotar","PProwler","PTS1","TargetP","WoLF PSORT","YLoc","Experimental Locations","All Publications","Arabidopsis best match"]
["Os01t0114300-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 6Similar to Receptor-like protein kinase (Fragment). (Os01t0114300-01)","1",80,{"v":9202.37,"d":"9202.370"},{"v":9.26234,"d":"9.262"},{"v":0.25125,"d":"0.251"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,cytosol,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","plasma membrane",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT2G29130.1"]
["Os01t0117200-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 16Similar to ARK protein (Fragment). (Os01t0117200-01)","1",723,{"v":81895.2,"d":"81895.200"},{"v":6.07416,"d":"6.074"},{"v":-0.0874136,"d":"-0.087"},"plasma membrane","mitochondrion,plasma membrane,plastid,nucleus","plastid",null,null,"mitochondrion","plasma membrane","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G66910.1"]
["Os01t0128000-01","Rice","Myb transcription factor domain containing protein. (Os01t0128000-01)","1",350,{"v":38490.4,"d":"38490.400"},{"v":6.50363,"d":"6.504"},{"v":-0.485714,"d":"-0.486"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G68320.1"]
["Os01t0142300-01","Rice","sulfoquinovosyldiacylglycerol 2Glycosyl transferase, group 1 domain containing protein. (Os01t0142300-01);Glycosyl transferase, group 1 domain containing protein. (Os01t0142300-02)","1",436,{"v":49159.9,"d":"49159.900"},{"v":7.16243,"d":"7.162"},{"v":-0.0958716,"d":"-0.096"},"cytosol","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G01220.1"]
["Os01t0142300-02","Rice","sulfoquinovosyldiacylglycerol 2Glycosyl transferase, group 1 domain containing protein. (Os01t0142300-01);Glycosyl transferase, group 1 domain containing protein. (Os01t0142300-02)","1",436,{"v":49159.9,"d":"49159.900"},{"v":7.16243,"d":"7.162"},{"v":-0.0958716,"d":"-0.096"},"cytosol","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G01220.1"]
["Os01t0170600-01","Rice","Hypothetical conserved gene. (Os01t0170600-01);UspA domain containing protein. (Os01t0170600-02)","1",272,{"v":29739.1,"d":"29739.100"},{"v":10.7758,"d":"10.776"},{"v":0.00551471,"d":"0.006"},"extracellular","mitochondrion,plastid,golgi","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion,plastid,golgi","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:extracellular:18372294","18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008","AT5G57050.2"]
["Os01t0170600-02","Rice","Hypothetical conserved gene. (Os01t0170600-01);UspA domain containing protein. (Os01t0170600-02)","1",160,{"v":17285.8,"d":"17285.800"},{"v":8.05857,"d":"8.059"},{"v":-0.00375,"d":"-0.004"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","cytosol,plastid,nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G17020.1"]
["Os01t0176000-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0176000-01)","1",498,{"v":54608,"d":"54608.000"},{"v":5.68272,"d":"5.683"},{"v":-0.103414,"d":"-0.103"},"extracellular","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",null,"vacuole",null,"cytosol","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","peroxisome","msms:extracellular:26072143","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015","AT2G36790.1"]
["Os01t0176200-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0176200-01);UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0176200-02)","1",497,{"v":54913.7,"d":"54913.700"},{"v":5.15175,"d":"5.152"},{"v":-0.0509054,"d":"-0.051"},"mitochondrion,cytosol,plastid,golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"extracellular","mitochondrion","cytosol","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","golgi",null,null,"AT2G36780.1"]
["Os01t0176200-02","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0176200-01);UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0176200-02)","1",497,{"v":54913.7,"d":"54913.700"},{"v":5.15175,"d":"5.152"},{"v":-0.0509054,"d":"-0.051"},"mitochondrion,cytosol,plastid,golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"extracellular","mitochondrion","cytosol","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","golgi",null,null,"AT2G36780.1"]
["Os01t0178200-00","Rice","Similar to integral membrane family protein. (Os01t0178200-00)","1",333,{"v":35014.6,"d":"35014.600"},{"v":9.70939,"d":"9.709"},{"v":0.397898,"d":"0.398"},"plastid","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plasma membrane",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT5G19930.1"]
["Os01t0178900-01","Rice","Similar to Symbiosis-related disease resistance protein (Fragment). (Os01t0178900-01)","1",526,{"v":59263,"d":"59263.000"},{"v":5.06229,"d":"5.062"},{"v":-0.0110266,"d":"-0.011"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G14470.1"]
["Os01t0184100-01","Rice","18.0 KDA CLASS II HEAT SHOCK PROTEINSimilar to 17.5 kDa class II heat shock protein. (Os01t0184100-01)","1",166,{"v":18031.9,"d":"18031.900"},{"v":5.41565,"d":"5.416"},{"v":-0.386145,"d":"-0.386"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid","cytosol",null,"cytosol",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:26035336,msms:plastid:27992503","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT5G12020.1"]
["Os01t0193900-01","Rice","ALWAYS EARLYLIKE 1Homeodomain-like domain containing protein. (Os01t0193900-01);Hypothetical conserved gene. (Os01t0193900-02)","1",843,{"v":94736.7,"d":"94736.700"},{"v":8.1812,"d":"8.181"},{"v":-0.739027,"d":"-0.739"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G05380.3"]
["Os01t0193900-02","Rice","ALWAYS EARLYLIKE 1Homeodomain-like domain containing protein. (Os01t0193900-01);Hypothetical conserved gene. (Os01t0193900-02)","1",212,{"v":23277.4,"d":"23277.400"},{"v":4.50883,"d":"4.509"},{"v":-0.430189,"d":"-0.430"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G21430.2"]
["Os01t0194600-02","Rice","GLUTAREDOXIN 2Thioredoxin fold domain containing protein. (Os01t0194600-02)","1",125,{"v":12799.7,"d":"12799.700"},{"v":5.66504,"d":"5.665"},{"v":0.3168,"d":"0.317"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G11930.1"]
["Os01t0201100-01","Rice","Similar to xylosyltransferase oxt. (Os01t0201100-01)","1",480,{"v":52135.1,"d":"52135.100"},{"v":9.25956,"d":"9.260"},{"v":-0.199375,"d":"-0.199"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","golgi","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid",null,null,"AT3G15350.2"]
["Os01t0210200-00","Rice","Similar to Myb-like DNA-binding domain containing protein, expressed. (Os01t0210200-00)","1",195,{"v":22145.1,"d":"22145.100"},{"v":9.10719,"d":"9.107"},{"v":-0.653333,"d":"-0.653"},"nucleus","plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT5G67300.1"]
["Os01t0222900-01","Rice","Curculin-like (mannose-binding) lectin domain containing protein. (Os01t0222900-01)","1",261,{"v":29026.2,"d":"29026.200"},{"v":6.51084,"d":"6.511"},{"v":0.157088,"d":"0.157"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","extracellular","plasma membrane","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","vacuole",null,null,"AT2G19130.1"]
["Os01t0224700-01","Rice","YUCCA-LIKE GENE 4Flavin monooxygenase-like enzyme, Auxin biosynthesis (Os01t0224700-01)","1",439,{"v":48204.8,"d":"48204.800"},{"v":6.5128,"d":"6.513"},{"v":-0.0505695,"d":"-0.051"},"peroxisome","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","cytosol,plastid",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT1G04180.1"]
["Os01t0246700-01","Rice","WRKY GENE1Similar to WRKY transcription factor 1. (Os01t0246700-01)","1",413,{"v":42150.7,"d":"42150.700"},{"v":4.96683,"d":"4.967"},{"v":-0.578935,"d":"-0.579"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G62300.1"]
["Os01t0279300-01","Rice","calmodulin 3Similar to Calmodulin 1 (Fragment). (Os01t0279300-01)","1",149,{"v":16832.6,"d":"16832.600"},{"v":3.87615,"d":"3.876"},{"v":-0.602013,"d":"-0.602"},"cytosol,plasma membrane,plastid","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,plasma membrane",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G27030.1"]
["Os01t0297200-01","Rice","ATPase, AAA-type, core domain containing protein. (Os01t0297200-01)","1",527,{"v":59756.3,"d":"59756.300"},{"v":7.0981,"d":"7.098"},{"v":-0.594687,"d":"-0.595"},"mitochondrion,endoplasmic reticulum","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G28600.1"]
["Os01t0299700-01","Rice","3'-5' exonuclease domain containing protein. (Os01t0299700-01)","1",237,{"v":25494.6,"d":"25494.600"},{"v":7.68062,"d":"7.681"},{"v":-0.0472574,"d":"-0.047"},"cytosol,peroxisome","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G13870.1"]
["Os01t0318400-00","Rice","Conserved hypothetical protein. (Os01t0318400-00)","1",163,{"v":18066.9,"d":"18066.900"},{"v":6.13085,"d":"6.131"},{"v":-0.969325,"d":"-0.969"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":4},"msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT3G10040.1"]
["Os01t0326300-01","Rice","Haem peroxidase, plant/fungal/bacterial family protein. (Os01t0326300-01)","1",280,{"v":29103.2,"d":"29103.200"},{"v":4.47028,"d":"4.470"},{"v":0.0546429,"d":"0.055"},"cytosol,plasma membrane,extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G05260.1"]
["Os01t0389700-01","Rice","Protein of unknown function DUF679 family protein. (Os01t0389700-01)","1",240,{"v":25746.7,"d":"25746.700"},{"v":8.68739,"d":"8.687"},{"v":-0.04125,"d":"-0.041"},"plastid","extracellular,nucleus,cytosol,vacuole,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plasma membrane,extracellular,plastid","plastid","plastid",null,"plastid","vacuole","plastid",null,null,"AT4G24310.1"]
["Os01t0528300-01","Rice","Similar to OSIGBa0142C11.3 protein. (Os01t0528300-01)","1",142,{"v":15432.5,"d":"15432.500"},{"v":11.7804,"d":"11.780"},{"v":-0.571127,"d":"-0.571"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular",null,null,"AT5G22630.1"]
["Os01t0540800-01","Rice","Conserved hypothetical protein. (Os01t0540800-01)","1",139,{"v":16006.6,"d":"16006.600"},{"v":10.7452,"d":"10.745"},{"v":-0.125899,"d":"-0.126"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","cytosol","cytosol",null,null,"AT2G28320.1"]
["Os01t0551100-01","Rice","Ribonuclease III domain containing protein. (Os01t0551100-01)","1",256,{"v":28174.4,"d":"28174.400"},{"v":4.98852,"d":"4.989"},{"v":-0.358594,"d":"-0.359"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT3G20420.1"]
["Os01t0597800-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os01t0597800-01)","1",497,{"v":53766.9,"d":"53766.900"},{"v":5.21537,"d":"5.215"},{"v":-0.114085,"d":"-0.114"},"plasma membrane","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",null,"extracellular",null,"peroxisome","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT2G15480.2"]
["Os01t0606900-01","Rice","DnaJ domain protein C10Heat shock protein DnaJ, N-terminal domain containing protein. (Os01t0606900-01)","1",197,{"v":21678.3,"d":"21678.300"},{"v":5.27661,"d":"5.277"},{"v":-0.527411,"d":"-0.527"},"mitochondrion","mitochondrion,nucleus,endoplasmic reticulum,cytosol,plastid","nucleus",null,"cytosol","mitochondrion","mitochondrion","endoplasmic reticulum,nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT1G71000.1"]
["Os01t0623200-01","Rice","Similar to C4-dicarboxylate transporter/malic acid transport protein. (Os01t0623200-01)","1",658,{"v":72758.7,"d":"72758.700"},{"v":7.99179,"d":"7.992"},{"v":0.0755319,"d":"0.076"},"plasma membrane,cytosol,peroxisome","mitochondrion,cytosol,peroxisome,plasma membrane","cytosol",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","peroxisome",null,null,"AT5G24030.1"]
["Os01t0639600-01","Rice","Protein of unknown function DUF1645 family protein. (Os01t0639600-01)","1",248,{"v":26725.9,"d":"26725.900"},{"v":8.49828,"d":"8.498"},{"v":-0.597177,"d":"-0.597"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G23710.1"]
["Os01t0650800-01","Rice","Transposon, En/Spm-like domain containing protein. (Os01t0650800-01)","1",333,{"v":38633,"d":"38633.000"},{"v":9.43811,"d":"9.438"},{"v":-0.366066,"d":"-0.366"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","mitochondrion","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G14440.1"]
["Os01t0660200-01","Rice","C10728, OsChib3aAcidic class III chitinase OsChib3a precursor (Chitinase) (EC 3.2.1.14). (Os01t0660200-01)","1",301,{"v":31041.1,"d":"31041.100"},{"v":4.12463,"d":"4.125"},{"v":0.0637874,"d":"0.064"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:19038476,msms:extracellular:19226311,msms:extracellular:21255809,msms:extracellular:23159799,msms:extracellular:24083427,msms:extracellular:25047395,msms:extracellular:28232208","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21255809:T:T:Shinano,S:S:Komatsu,T:T:Yoshimura,S:S:Tokutake,F-J:FJ:Kong,T:T:Watanabe,J:J:Wasaki,M:M:Osaki:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G24090.1"]
["Os01t0667000-00","Rice","NAC DOMAIN-CONTAINING PROTEIN 141No apical meristem (NAM) protein domain containing protein. (Os01t0667000-00)","1",340,{"v":37711.1,"d":"37711.100"},{"v":6.72368,"d":"6.724"},{"v":-0.762353,"d":"-0.762"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G55210.1"]
["Os01t0667100-01","Rice","Similar to 60S ribosomal protein L18A. (Os01t0667100-01)","1",185,{"v":19919.1,"d":"19919.100"},{"v":8.41625,"d":"8.416"},{"v":0.0351351,"d":"0.035"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT1G17080.1"]
["Os01t0681800-01","Rice","Conserved hypothetical protein. (Os01t0681800-01)","1",129,{"v":13466,"d":"13466.000"},{"v":11.7365,"d":"11.737"},{"v":-0.594574,"d":"-0.595"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid,nucleus",null,"plastid",null,"plastid","nucleus","cytosol",null,null,"AT3G17590.2"]
["Os01t0694000-01","Rice","Protein kinase, core domain containing protein. (Os01t0694000-01)","1",487,{"v":53589.1,"d":"53589.100"},{"v":7.25792,"d":"7.258"},{"v":0.0416838,"d":"0.042"},"plasma membrane","mitochondrion,plasma membrane,plastid","plastid",{"$nulls":3},"plasma membrane","plasma membrane",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT2G24130.1"]
["Os01t0701700-01","Rice","SAM dependent carboxyl methyltransferase family protein. (Os01t0701700-01)","1",379,{"v":42122.5,"d":"42122.500"},{"v":5.48212,"d":"5.482"},{"v":-0.0736148,"d":"-0.074"},"extracellular","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT4G36470.1"]
["Os01t0720400-01","Rice","acid phosphatase 1HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os01t0720400-01)","1",274,{"v":29960.2,"d":"29960.200"},{"v":4.89404,"d":"4.894"},{"v":0.00839416,"d":"0.008"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT1G73010.1"]
["Os01t0733200-01","Rice","HEAT STRESS TRANSCRIPTION FACTOR C1bSimilar to Heat shock transcription factor 29 (Fragment). (Os01t0733200-01)","1",250,{"v":27220.6,"d":"27220.600"},{"v":8.94973,"d":"8.950"},{"v":-0.3684,"d":"-0.368"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","gfp:cytosol:22616023,gfp:nucleus:22616023","22616023:Romy:R:Schmidt,Jos H M:JH:Schippers,Annelie:A:Welker,Delphine:D:Mieulet,Emmanuel:E:Guiderdoni,Bernd:B:Mueller-Roeber:2012","AT3G24520.1"]
["Os01t0740300-01","Rice","Hypothetical protein. (Os01t0740300-01)","1",105,{"v":11888.4,"d":"11888.400"},{"v":8.94089,"d":"8.941"},{"v":-0.146667,"d":"-0.147"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G52820.1"]
["Os01t0743800-00","Rice","PSEUDO-PHOSPHOTRANSFER PROTEIN 1Similar to histidine-containing phosphotransfer protein 4. (Os01t0743800-00)","1",151,{"v":17394.7,"d":"17394.700"},{"v":7.82316,"d":"7.823"},{"v":-0.664901,"d":"-0.665"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT3G16360.2"]
["Os01t0748200-00","Rice","Conserved hypothetical protein. (Os01t0748200-00)","1",446,{"v":48736.9,"d":"48736.900"},{"v":9.32623,"d":"9.326"},{"v":-0.0991031,"d":"-0.099"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",null,"nucleus","mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT3G58800.1"]
["Os01t0757900-01","Rice","Haloacid dehalogenase/epoxide hydrolase domain containing protein. (Os01t0757900-01)","1",196,{"v":22337.5,"d":"22337.500"},{"v":10.1029,"d":"10.103"},{"v":-0.128571,"d":"-0.129"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G21470.1"]
["Os01t0764600-01","Rice","Hypothetical conserved gene. (Os01t0764600-01);Aspartate/glutamate/uridylate kinase domain containing protein. (Os01t0764600-02)","1",169,{"v":17268.5,"d":"17268.500"},{"v":9.49067,"d":"9.491"},{"v":-0.154438,"d":"-0.154"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"plastid",null,"plastid",null,"mitochondrion",null,null,"AT1G26640.1"]
["Os01t0764600-02","Rice","Hypothetical conserved gene. (Os01t0764600-01);Aspartate/glutamate/uridylate kinase domain containing protein. (Os01t0764600-02)","1",335,{"v":35256.2,"d":"35256.200"},{"v":6.5855,"d":"6.586"},{"v":0.0328358,"d":"0.033"},"cytosol","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G26640.1"]
["Os01t0764900-01","Rice","Similar to Formamidase. (Os01t0764900-01)","1",454,{"v":49728.4,"d":"49728.400"},{"v":5.01846,"d":"5.018"},{"v":-0.201542,"d":"-0.202"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"cytosol","plastid","cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G37560.1"]
["Os01t0771100-01","Rice","Mitochondrial glycoprotein family protein. (Os01t0771100-01)","1",243,{"v":26100.8,"d":"26100.800"},{"v":7.69655,"d":"7.697"},{"v":-0.218107,"d":"-0.218"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT4G32605.1"]
["Os01t0773600-01","Rice","Glycoside hydrolase, family 47 protein. (Os01t0773600-01)","1",684,{"v":75301.1,"d":"75301.100"},{"v":4.81012,"d":"4.810"},{"v":-0.270906,"d":"-0.271"},"mitochondrion","mitochondrion,plasma membrane,nucleus,cytosol,golgi,peroxisome,plastid","plastid",null,"nucleus","plastid","golgi","cytosol,peroxisome",null,"mitochondrion",null,"mitochondrion","mitochondrion","plasma membrane",null,null,"AT5G43710.1"]
["Os01t0778100-01","Rice","DUF966-stress repressive gene 1Hypothetical conserved gene. (Os01t0778100-01)","1",395,{"v":43357.3,"d":"43357.300"},{"v":10.3642,"d":"10.364"},{"v":-0.861266,"d":"-0.861"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G05577.1"]
["Os01t0815400-01","Rice","Conserved hypothetical protein. (Os01t0815400-01)","1",97,{"v":10365.7,"d":"10365.700"},{"v":7.5225,"d":"7.523"},{"v":0.12268,"d":"0.123"},"plasma membrane,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT3G47510.1"]
["Os01t0824800-01","Rice","Conserved hypothetical protein. (Os01t0824800-01)","1",400,{"v":42231,"d":"42231.000"},{"v":8.30843,"d":"8.308"},{"v":0.66375,"d":"0.664"},"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"cytosol","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT1G62120.1"]
["Os01t0828300-01","Rice","Protein of unknown function DUF248, methyltransferase putative family protein. (Os01t0828300-01)","1",674,{"v":74537,"d":"74537.000"},{"v":9.12816,"d":"9.128"},{"v":-0.202522,"d":"-0.203"},"plastid,golgi","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","vacuole","golgi",null,null,"AT2G40280.1"]
["Os01t0839100-01","Rice","ZINC FINGER PROTEIN 179Zinc finger, C2H2 domain containing protein. (Os01t0839100-01)","1",171,{"v":17945.9,"d":"17945.900"},{"v":5.02331,"d":"5.023"},{"v":-0.374854,"d":"-0.375"},"nucleus","cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT3G46080.1"]
["Os01t0840100-01","Rice","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1Heat shock protein Hsp70 family protein. (Os01t0840100-01)","1",648,{"v":70955.4,"d":"70955.400"},{"v":4.83404,"d":"4.834"},{"v":-0.4,"d":"-0.400"},"plasma membrane,plastid,nucleus","mitochondrion,cytosol,endoplasmic reticulum,plastid","cytosol",null,"plastid",null,"cytosol","mitochondrion,endoplasmic reticulum",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:18022940,msms:plasma membrane:18260611,msms:nucleus:19621931,msms:plastid:21433289,msms:extracellular:24083427,msms:plasma membrane:27800704,msms:plastid:27992503","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G12580.1"]
["Os01t0841600-01","Rice","triose phosphate isomerase, stress and methylglyoxal inducible triose phosphate isomeraseTriose phosphate isomerase (EC 5.3.1.1), Abiotic stress response, Response to methylglyoxal (cytotoxin) (Os01t0841600-01)","1",255,{"v":27274.8,"d":"27274.800"},{"v":5.42625,"d":"5.426"},{"v":0.12549,"d":"0.125"},"cytosol","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,"peroxisome",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G55440.1"]
["Os01t0855200-01","Rice","Tetratricopeptide-like helical domain containing protein. (Os01t0855200-01)","1",512,{"v":54990.3,"d":"54990.300"},{"v":5.58971,"d":"5.590"},{"v":-0.301758,"d":"-0.302"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G29670.2"]
["Os01t0859200-01","Rice","Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-01);Conserved hypothetical protein. (Os01t0859200-02);Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-03)","1",347,{"v":38970.6,"d":"38970.600"},{"v":6.72529,"d":"6.725"},{"v":-0.225648,"d":"-0.226"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G48410.1"]
["Os01t0859200-02","Rice","Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-01);Conserved hypothetical protein. (Os01t0859200-02);Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-03)","1",142,{"v":15401.1,"d":"15401.100"},{"v":12.0285,"d":"12.029"},{"v":-1.12606,"d":"-1.126"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G13200.1"]
["Os01t0859200-03","Rice","Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-01);Conserved hypothetical protein. (Os01t0859200-02);Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0859200-03)","1",347,{"v":38970.6,"d":"38970.600"},{"v":6.72529,"d":"6.725"},{"v":-0.225648,"d":"-0.226"},"endoplasmic reticulum,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT3G48410.1"]
["Os01t0862600-01","Rice","Protein of unknown function DUF584 family protein. (Os01t0862600-01)","1",219,{"v":23493.6,"d":"23493.600"},{"v":7.81054,"d":"7.811"},{"v":-0.565297,"d":"-0.565"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G15040.1"]
["Os01t0864200-01","Rice","Conserved hypothetical protein. (Os01t0864200-01)","1",151,{"v":16964.3,"d":"16964.300"},{"v":8.51541,"d":"8.515"},{"v":-0.454967,"d":"-0.455"},"endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane",null,null,"AT5G15020.1"]
["Os01t0864500-01","Rice","salt and drought sensitive gene 1Harpin-induced 1 domain containing protein. (Os01t0864500-01)","1",238,{"v":26012.1,"d":"26012.100"},{"v":10.1859,"d":"10.186"},{"v":-0.248319,"d":"-0.248"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G35980.1"]
["Os01t0864566-00","Rice","Hypothetical conserved gene. (Os01t0864566-00)","1",75,{"v":8415.54,"d":"8415.540"},{"v":12.0666,"d":"12.067"},{"v":0.242667,"d":"0.243"},"extracellular,plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","mitochondrion,plasma membrane,plastid","plastid","mitochondrion",null,null,"plastid","extracellular"]
["Os01t0869200-01","Rice","MAGNESIUM TRANSPORTER1, Magnesium transporter 1, MRS2/MGT family member 2Magnesium transporter, Mg-mediated aluminum tolerance (Os01t0869200-01)","1",418,{"v":46403.6,"d":"46403.600"},{"v":4.85133,"d":"4.851"},{"v":-0.245694,"d":"-0.246"},"mitochondrion,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT3G19640.1"]
["Os01t0877900-01","Rice","Conserved hypothetical protein. (Os01t0877900-01)","1",144,{"v":15764.4,"d":"15764.400"},{"v":10.1393,"d":"10.139"},{"v":-0.798611,"d":"-0.799"},"cytosol,plastid","cytosol,peroxisome,plastid,nucleus","plastid",null,"cytosol",null,"cytosol","peroxisome,plastid,nucleus",null,"plastid",null,"plastid","plastid","cytosol",null,null,"AT2G34185.2"]
["Os01t0882400-01","Rice","Protein of unknown function DUF679 domain containing protein. (Os01t0882400-01)","1",239,{"v":26401.1,"d":"26401.100"},{"v":8.48506,"d":"8.485"},{"v":0.135565,"d":"0.136"},"cytosol,peroxisome","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","mitochondrion,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol",null,null,"AT3G21520.1"]
["Os01t0883000-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 50Similar to protein kinase. (Os01t0883000-00)","1",842,{"v":89367.9,"d":"89367.900"},{"v":6.99373,"d":"6.994"},{"v":0.00819477,"d":"0.008"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G11050.1"]
["Os01t0919800-01","Rice","PIN PROTEIN 5ASimilar to Efflux carrier of polar auxin transport. (Os01t0919800-01)","1",363,{"v":38626.9,"d":"38626.900"},{"v":9.51539,"d":"9.515"},{"v":0.879614,"d":"0.880"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G16530.1"]
["Os01t0920100-01","Rice","Conserved hypothetical protein. (Os01t0920100-01)","1",231,{"v":24940,"d":"24940.000"},{"v":8.10983,"d":"8.110"},{"v":-0.787013,"d":"-0.787"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G27210.1"]
["Os01t0930400-01","Rice","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 5Potassium transporter, High-affinity K acquisition, Root-to-shoot K transport, K-regulated salt tolerance (Os01t0930400-01)","1",781,{"v":87080.5,"d":"87080.500"},{"v":8.19038,"d":"8.190"},{"v":0.272471,"d":"0.272"},"plasma membrane","mitochondrion,plasma membrane,cytosol,vacuole,peroxisome,plastid","plastid",{"$nulls":3},"cytosol","plasma membrane,vacuole",null,"mitochondrion",null,null,"plasma membrane","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G13420.1"]
["Os01t0933200-00","Rice","Heavy metal transport/detoxification protein domain containing protein. (Os01t0933200-00)","1",336,{"v":36849.3,"d":"36849.300"},{"v":5.28108,"d":"5.281"},{"v":-1.09643,"d":"-1.096"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G19090.1"]
["Os01t0944900-01","Rice","beta-1, 3-glucanase 2Similar to Glucan endo-1,3-beta-D-glucosidase. (Os01t0944900-01)","1",52,{"v":5870.06,"d":"5870.060"},{"v":12.1597,"d":"12.160"},{"v":-1.04808,"d":"-1.048"},"golgi","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"plasma membrane","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"plastid",null,"cytosol","msms:golgi:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT1G63100.1"]
["Os01t0949700-01","Rice","TAU GLUTATHIONE S-TRANSFERASE 7Glutathione S-transferase, C-terminal domain containing protein. (Os01t0949700-01)","1",239,{"v":26258.9,"d":"26258.900"},{"v":5.66351,"d":"5.664"},{"v":-0.0414226,"d":"-0.041"},"cytosol","mitochondrion,vacuole,cytosol,plastid","cytosol",null,"vacuole",null,"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G09270.1"]
["Os01t0949750-00","Rice","TAU GLUTATHIONE S-TRANSFERASE 35Similar to Glutathione S-transferase GST 28 (Fragment). (Os01t0949750-00)","1",218,{"v":25110.2,"d":"25110.200"},{"v":6.39796,"d":"6.398"},{"v":-0.214679,"d":"-0.215"},"cytosol","mitochondrion,cytosol,vacuole","cytosol",null,"vacuole",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G29420.1"]
["Os01t0950700-01","Rice","Conserved hypothetical protein. (Os01t0950700-01)","1",284,{"v":31895.5,"d":"31895.500"},{"v":12.2265,"d":"12.227"},{"v":-1.19789,"d":"-1.198"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G17360.3"]
["Os01t0952800-01","Rice","basic helix-loop-helix protein 056Achaete-scute transcription factor related domain containing protein. (Os01t0952800-01);Conserved hypothetical protein. (Os01t0952800-02)","1",247,{"v":26963,"d":"26963.000"},{"v":5.67638,"d":"5.676"},{"v":-0.290283,"d":"-0.290"},"nucleus","peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","nucleus",null,"peroxisome","peroxisome",null,"nucleus","nucleus",null,null,"AT2G41240.2"]
["Os01t0952800-02","Rice","basic helix-loop-helix protein 056Achaete-scute transcription factor related domain containing protein. (Os01t0952800-01);Conserved hypothetical protein. (Os01t0952800-02)","1",180,{"v":20624.7,"d":"20624.700"},{"v":12.2892,"d":"12.289"},{"v":-1.06167,"d":"-1.062"},"mitochondrion","mitochondrion,cytosol,extracellular,nucleus","nucleus",null,"cytosol","mitochondrion","extracellular","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT2G43900.2"]
["Os01t0955500-00","Rice","CALMODULIN-LIKE PROTEIN 19Putative calcium-binding protein CML19. (Os01t0955500-00)","1",146,{"v":16258.3,"d":"16258.300"},{"v":4.00897,"d":"4.009"},{"v":-0.282877,"d":"-0.283"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"extracellular",null,"cytosol","plasma membrane",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G76640.1"]
["Os01t0959750-00","Rice","Conserved hypothetical protein. (Os01t0959750-00)","1",23,{"v":2524.09,"d":"2524.090"},{"v":7.71464,"d":"7.715"},{"v":0.265217,"d":"0.265"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G11010.1"]
["Os01t0960400-01","Rice","Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)","1",952,{"v":105109,"d":"105109.000"},{"v":6.63746,"d":"6.637"},{"v":-0.143487,"d":"-0.143"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane","msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT1G06840.1"]
["Os01t0960400-02","Rice","Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)","1",666,{"v":73183.2,"d":"73183.200"},{"v":6.45075,"d":"6.451"},{"v":-0.1497,"d":"-0.150"},"plastid","cytosol,plasma membrane,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plasma membrane",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G06840.1"]
["Os01t0960400-03","Rice","Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)","1",361,{"v":39487.9,"d":"39487.900"},{"v":5.74931,"d":"5.749"},{"v":-0.225485,"d":"-0.225"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G06840.1"]
["Os01t0961300-01","Rice","Conserved hypothetical protein. (Os01t0961300-01)","1",151,{"v":16935.1,"d":"16935.100"},{"v":9.9581,"d":"9.958"},{"v":-0.113245,"d":"-0.113"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G31190.1"]
["Os01t0965900-01","Rice","Conserved hypothetical protein. (Os01t0965900-01)","1",205,{"v":22659.4,"d":"22659.400"},{"v":7.63448,"d":"7.634"},{"v":-0.119024,"d":"-0.119"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"cytosol","plastid","cytosol","plastid",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G04830.1"]
["Os01t0975300-01","Rice","MYB transcription factor 48MYB-related transcription factor, Drought and salinity tolerance (Os01t0975300-01);Similar to Myb factor protein. (Os01t0975300-02)","1",210,{"v":24076.8,"d":"24076.800"},{"v":6.78558,"d":"6.786"},{"v":-0.916191,"d":"-0.916"},"vacuole","mitochondrion,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","nucleus","msms:vacuole:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT3G46130.3"]
["Os01t0975300-02","Rice","MYB transcription factor 48MYB-related transcription factor, Drought and salinity tolerance (Os01t0975300-01);Similar to Myb factor protein. (Os01t0975300-02)","1",210,{"v":24076.8,"d":"24076.800"},{"v":6.78558,"d":"6.786"},{"v":-0.916191,"d":"-0.916"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT3G46130.3"]
["Os02t0108100-01","Rice","Conserved hypothetical protein. (Os02t0108100-01)","2",390,{"v":41837.2,"d":"41837.200"},{"v":12.6238,"d":"12.624"},{"v":-1.05179,"d":"-1.052"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT4G28250.1"]
["Os02t0119600-01","Rice","Conserved hypothetical protein. (Os02t0119600-01)","2",102,{"v":11163,"d":"11163.000"},{"v":4.65626,"d":"4.656"},{"v":-0.37549,"d":"-0.375"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G76250.1"]
["Os02t0132500-01","Rice","b-ZIP TRANSCRIPTION FACTOR 14Similar to Common plant regulatory factor 7. (Os02t0132500-01)","2",163,{"v":16895.9,"d":"16895.900"},{"v":7.51946,"d":"7.519"},{"v":-0.0288344,"d":"-0.029"},"nucleus","plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus","plastid","plastid",null,"plastid","nucleus","nucleus",null,null,"AT4G34590.1"]
["Os02t0134300-01","Rice","Transcription Elongation Factor 1Protein of unknown function DUF701, zinc-binding putative family protein. (Os02t0134300-01)","2",105,{"v":12155.1,"d":"12155.100"},{"v":4.56419,"d":"4.564"},{"v":-0.94,"d":"-0.940"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G46030.3"]
["Os02t0135300-00","Rice","protein kinase Wee1Similar to Wee1-like protein kinase. (Os02t0135300-00)","2",520,{"v":58394.3,"d":"58394.300"},{"v":6.44228,"d":"6.442"},{"v":-0.609808,"d":"-0.610"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus","mitochondrion","mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT1G02970.1"]
["Os02t0140500-00","Rice","oxidosqualene cyclase 4Similar to cycloartenol synthase. (Os02t0140500-00)","2",89,{"v":10443.5,"d":"10443.500"},{"v":11.1594,"d":"11.159"},{"v":-0.551685,"d":"-0.552"},"mitochondrion","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",{"$nulls":3},"mitochondrion","plasma membrane,plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G07050.1"]
["Os02t0159700-01","Rice","Similar to electron transport SCO1/SenC family protein. (Os02t0159700-01);Hypothetical conserved gene. (Os02t0159700-02);Hypothetical gene. (Os02t0159700-03)","2",165,{"v":16931.4,"d":"16931.400"},{"v":11.8023,"d":"11.802"},{"v":-0.179394,"d":"-0.179"},"mitochondrion","mitochondrion,plasma membrane,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","plasma membrane,plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G08950.1"]
["Os02t0159700-02","Rice","Similar to electron transport SCO1/SenC family protein. (Os02t0159700-01);Hypothetical conserved gene. (Os02t0159700-02);Hypothetical gene. (Os02t0159700-03)","2",151,{"v":15058,"d":"15058.000"},{"v":11.8232,"d":"11.823"},{"v":-0.146358,"d":"-0.146"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G56120.1"]
["Os02t0159700-03","Rice","Similar to electron transport SCO1/SenC family protein. (Os02t0159700-01);Hypothetical conserved gene. (Os02t0159700-02);Hypothetical gene. (Os02t0159700-03)","2",175,{"v":19096.6,"d":"19096.600"},{"v":11.5681,"d":"11.568"},{"v":-0.710857,"d":"-0.711"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G54440.3"]
["Os02t0166501-00","Rice","Hypothetical conserved gene. (Os02t0166501-00)","2",71,{"v":7194.12,"d":"7194.120"},{"v":9.32688,"d":"9.327"},{"v":0.971831,"d":"0.972"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","extracellular","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT5G17140.1"]
["Os02t0178100-01","Rice","B-box-containing protein 3, CCT domain-containing gene 5, CCT (CO, CO-LIKE and TOC1) domain protein 5, CCT domain protein 5Similar to CONSTANS-like protein CO6. (Os02t0178100-01)","2",331,{"v":33819.6,"d":"33819.600"},{"v":6.33894,"d":"6.339"},{"v":-0.175227,"d":"-0.175"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT2G24790.1"]
["Os02t0181900-01","Rice","CLASS I CLP ATPASE B-MSimilar to ClpB. (Os02t0181900-01)","2",983,{"v":109254,"d":"109254.000"},{"v":7.24902,"d":"7.249"},{"v":-0.350254,"d":"-0.350"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","gfp:mitochondrion:20141629,msms:plasma membrane:27800704,msms:plastid:27992503","20141629:Amanjot:A:Singh,Upasana:U:Singh,Dheeraj:D:Mittal,Anil:A:Grover:2010,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G25140.1"]
["Os02t0190300-01","Rice","ABC TRANSPORTER B FAMILY MEMBER 9P-glycoprotein homologue. (Os02t0190300-01)","2",{"v":1245,"d":"1,245"},{"v":135061,"d":"135061.000"},{"v":8.46523,"d":"8.465"},{"v":0.0801606,"d":"0.080"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G28345.1"]
["Os02t0193100-01","Rice","Conserved hypothetical protein. (Os02t0193100-01)","2",209,{"v":22079.4,"d":"22079.400"},{"v":8.05526,"d":"8.055"},{"v":-0.243062,"d":"-0.243"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT1G76600.1"]
["Os02t0193200-01","Rice","Similar to TMV response-related protein. (Os02t0193200-01)","2",200,{"v":21237.6,"d":"21237.600"},10.715,{"v":-0.2525,"d":"-0.253"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G76600.1"]
["Os02t0217900-00","Rice","HSP19.0Similar to Cytosolic class II small heat shock protein 4 (Fragment). (Os02t0217900-00)","2",175,{"v":19025.1,"d":"19025.100"},{"v":5.47857,"d":"5.479"},{"v":-0.486286,"d":"-0.486"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"cytosol",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G12020.1"]
["Os02t0244700-01","Rice","PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-01);Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-02);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-03);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-04)","2",968,{"v":109939,"d":"109939.000"},{"v":6.14676,"d":"6.147"},{"v":-0.352066,"d":"-0.352"},"plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G42600.3"]
["Os02t0244700-02","Rice","PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-01);Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-02);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-03);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-04)","2",968,{"v":109939,"d":"109939.000"},{"v":6.14676,"d":"6.147"},{"v":-0.352066,"d":"-0.352"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G42600.3"]
["Os02t0244700-03","Rice","PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-01);Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-02);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-03);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-04)","2",452,{"v":51771.8,"d":"51771.800"},{"v":5.54912,"d":"5.549"},{"v":-0.486726,"d":"-0.487"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G42600.1"]
["Os02t0244700-04","Rice","PEP carboxylase 1, Phosphoenolpyruvate carboxylase 1, PEPCase 1Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-01);Similar to Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (CP21). (Os02t0244700-02);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-03);Similar to Phosphoenolpyruvate carboxylase. (Os02t0244700-04)","2",384,{"v":43381.3,"d":"43381.300"},{"v":8.87397,"d":"8.874"},{"v":-0.34375,"d":"-0.344"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G53310.1"]
["Os02t0303200-01","Rice","Hypothetical protein. (Os02t0303200-01)","2",162,{"v":17439,"d":"17439.000"},{"v":11.1243,"d":"11.124"},{"v":-0.129012,"d":"-0.129"},"peroxisome","mitochondrion,peroxisome,nucleus","nucleus",null,null,"mitochondrion","peroxisome","mitochondrion,nucleus",null,"mitochondrion",{"$nulls":3},"peroxisome"]
["Os02t0317700-01","Rice","Conserved hypothetical protein. (Os02t0317700-01);Hypothetical conserved gene. (Os02t0317700-02)","2",247,{"v":27371.4,"d":"27371.400"},{"v":10.6444,"d":"10.644"},{"v":-0.197571,"d":"-0.198"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G47780.1"]
["Os02t0317700-02","Rice","Conserved hypothetical protein. (Os02t0317700-01);Hypothetical conserved gene. (Os02t0317700-02)","2",206,{"v":22425.8,"d":"22425.800"},{"v":11.1329,"d":"11.133"},{"v":-0.281553,"d":"-0.282"},"plastid","vacuole,cytosol,extracellular,plastid","plastid",null,"vacuole","plastid","cytosol","extracellular","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G18040.1"]
["Os02t0456000-01","Rice","COG4 transport domain containing protein. (Os02t0456000-01)","2",561,{"v":61155.9,"d":"61155.900"},{"v":4.85358,"d":"4.854"},{"v":-0.0520499,"d":"-0.052"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G01395.1"]
["Os02t0497700-01","Rice","Similar to Ras-GTPase-activating protein SH3-domain binding protein-like. (Os02t0497700-01);Similar to Ras-GTPase-activating protein SH3-domain binding protein-like. (Os02t0497700-02)","2",480,{"v":50882.2,"d":"50882.200"},{"v":4.74611,"d":"4.746"},{"v":-0.509167,"d":"-0.509"},"cytosol,plasma membrane,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:23303719,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23303719:Qi:Q:He,Lei:L:Chen,Yu:Y:Xu,Weichang:W:Yu:2013","AT5G60980.2"]
["Os02t0497700-02","Rice","Similar to Ras-GTPase-activating protein SH3-domain binding protein-like. (Os02t0497700-01);Similar to Ras-GTPase-activating protein SH3-domain binding protein-like. (Os02t0497700-02)","2",169,{"v":17934.8,"d":"17934.800"},{"v":10.3284,"d":"10.328"},{"v":-0.798817,"d":"-0.799"},"cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G60980.2"]
["Os02t0504000-01","Rice","Similar to Cytochrome P450 CYP81L6. (Os02t0504000-01)","2",185,{"v":19716.3,"d":"19716.300"},{"v":11.9556,"d":"11.956"},{"v":0.100541,"d":"0.101"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol",null,"endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT4G37330.1"]
["Os02t0525900-01","Rice","Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-01);Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-02);Similar to H0502B11.5 protein. (Os02t0525900-03)","2",705,{"v":77596.2,"d":"77596.200"},{"v":5.84428,"d":"5.844"},{"v":-0.208369,"d":"-0.208"},"cytosol","mitochondrion,cytosol,peroxisome","cytosol",null,"cytosol",null,"cytosol","peroxisome",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G36880.2"]
["Os02t0525900-02","Rice","Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-01);Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-02);Similar to H0502B11.5 protein. (Os02t0525900-03)","2",705,{"v":77596.2,"d":"77596.200"},{"v":5.84428,"d":"5.844"},{"v":-0.208369,"d":"-0.208"},"cytosol,plasma membrane","mitochondrion,cytosol,peroxisome","cytosol",null,"cytosol",null,"cytosol","peroxisome",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G36880.2"]
["Os02t0525900-03","Rice","Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-01);Similar to Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2). (Os02t0525900-02);Similar to H0502B11.5 protein. (Os02t0525900-03)","2",452,{"v":50266.5,"d":"50266.500"},{"v":6.24864,"d":"6.249"},{"v":-0.271018,"d":"-0.271"},"cytosol,peroxisome","mitochondrion,cytosol,endoplasmic reticulum,peroxisome","cytosol",null,"endoplasmic reticulum",null,"peroxisome","peroxisome",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G36880.2"]
["Os02t0526400-01","Rice","CLASS I CLP ATPASE D1Similar to ATP-dependent Clp protease ATP-binding subunit. (Os02t0526400-01)","2",822,{"v":89967.5,"d":"89967.500"},{"v":5.57878,"d":"5.579"},{"v":-0.174818,"d":"-0.175"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G51070.1"]
["Os02t0540700-00","Rice","plant U-box-containing protein 45, U-box protein 45Similar to Arm repeat-containing protein. (Os02t0540700-00)","2",505,{"v":52085.6,"d":"52085.600"},{"v":7.57362,"d":"7.574"},{"v":0.128317,"d":"0.128"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT5G64660.1"]
["Os02t0558700-00","Rice","ETHYLENE RESPONSE FACTOR 21Similar to dehydration-responsive element-binding protein 1D. (Os02t0558700-00)","2",184,{"v":19556.8,"d":"19556.800"},{"v":5.04307,"d":"5.043"},{"v":-0.526087,"d":"-0.526"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G71450.1"]
["Os02t0573500-01","Rice","Similar to Monosaccharide transporter 1. (Os02t0573500-01)","2",527,{"v":56436.3,"d":"56436.300"},{"v":9.27975,"d":"9.280"},{"v":0.581973,"d":"0.582"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid","mitochondrion","golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT1G11260.1"]
["Os02t0574100-01","Rice","Sugar/inositol transporter domain containing protein. (Os02t0574100-01)","2",518,{"v":55060.7,"d":"55060.700"},{"v":8.72337,"d":"8.723"},{"v":0.609653,"d":"0.610"},"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",null,"plastid",null,"peroxisome","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT1G11260.1"]
["Os02t0582300-01","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0582300-01)","2",845,{"v":94190.9,"d":"94190.900"},{"v":7.94635,"d":"7.946"},{"v":-0.0538462,"d":"-0.054"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT5G65560.1"]
["Os02t0592700-01","Rice","Conserved hypothetical protein. (Os02t0592700-01);Conserved hypothetical protein. (Os02t0592700-02)","2",208,{"v":22030.6,"d":"22030.600"},{"v":11.7859,"d":"11.786"},{"v":-0.619231,"d":"-0.619"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT3G29185.2"]
["Os02t0592700-02","Rice","Conserved hypothetical protein. (Os02t0592700-01);Conserved hypothetical protein. (Os02t0592700-02)","2",208,{"v":22030.6,"d":"22030.600"},{"v":11.7859,"d":"11.786"},{"v":-0.619231,"d":"-0.619"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT3G29185.2"]
["Os02t0594232-00","Rice","Hypothetical conserved gene. (Os02t0594232-00)","2",79,{"v":8564.16,"d":"8564.160"},{"v":10.6776,"d":"10.678"},{"v":-0.506329,"d":"-0.506"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",{"$nulls":3},"cytosol","extracellular",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT1G77260.1"]
["Os02t0601500-01","Rice","Cytochrome P450 family protein. (Os02t0601500-01)","2",320,{"v":35251.8,"d":"35251.800"},{"v":9.09729,"d":"9.097"},{"v":-0.010625,"d":"-0.011"},"endoplasmic reticulum,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT4G13310.2"]
["Os02t0603600-01","Rice","basic helix-loop-helix protein 110Conserved hypothetical protein. (Os02t0603600-01)","2",177,{"v":18267.1,"d":"18267.100"},{"v":7.29567,"d":"7.296"},{"v":-0.458757,"d":"-0.459"},"nucleus","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT1G05805.1"]
["Os02t0605900-01","Rice","CHITINASE 6Similar to Chitinase (EC 3.2.1.14) A. (Os02t0605900-01)","2",271,{"v":28535.2,"d":"28535.200"},{"v":4.55094,"d":"4.551"},{"v":-0.0321033,"d":"-0.032"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:19226311,msms:nucleus:19621931,msms:extracellular:21255809,msms:extracellular:23159799,msms:extracellular:24083427,msms:extracellular:25047395,msms:extracellular:28232208","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21255809:T:T:Shinano,S:S:Komatsu,T:T:Yoshimura,S:S:Tokutake,F-J:FJ:Kong,T:T:Watanabe,J:J:Wasaki,M:M:Osaki:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G54420.1"]
["Os02t0606600-01","Rice","CALMODULIN-LIKE PROTEIN 17Hypothetical conserved gene. (Os02t0606600-01)","2",71,{"v":8227.39,"d":"8227.390"},{"v":10.5702,"d":"10.570"},{"v":0.328169,"d":"0.328"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT3G54350.1"]
["Os02t0612200-01","Rice","NB-ARC domain containing protein. (Os02t0612200-01)","2",523,{"v":57762.7,"d":"57762.700"},{"v":8.38799,"d":"8.388"},{"v":-0.0804971,"d":"-0.080"},"plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT3G14460.1"]
["Os02t0632700-01","Rice","Conserved hypothetical protein. (Os02t0632700-01)","2",80,{"v":8421.71,"d":"8421.710"},{"v":12.1322,"d":"12.132"},0.605,"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,null,"AT5G05560.1"]
["Os02t0634600-01","Rice","Conserved hypothetical protein. (Os02t0634600-01);Similar to predicted protein. (Os02t0634600-02)","2",405,{"v":46053.2,"d":"46053.200"},{"v":7.17876,"d":"7.179"},{"v":-0.643704,"d":"-0.644"},"mitochondrion","mitochondrion,nucleus,cytosol,golgi,plastid","plastid",null,null,"mitochondrion","mitochondrion","nucleus,cytosol,golgi",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT5G23200.1"]
["Os02t0634600-02","Rice","Conserved hypothetical protein. (Os02t0634600-01);Similar to predicted protein. (Os02t0634600-02)","2",145,{"v":16989.2,"d":"16989.200"},{"v":9.09044,"d":"9.090"},{"v":-0.811724,"d":"-0.812"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT5G23200.1"]
["Os02t0663800-01","Rice","actin depolymerizing factor 1Similar to Actin-depolymerizing factor (ADF). (Os02t0663800-01)","2",139,{"v":15937,"d":"15937.000"},{"v":5.3211,"d":"5.321"},{"v":-0.319424,"d":"-0.319"},"plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G01750.1"]
["Os02t0668100-01","Rice","geranylgeranyl diphosphate synthase 2Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-01);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-02);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-03);Similar to predicted protein. (Os02t0668100-04)","2",342,{"v":35962.4,"d":"35962.400"},{"v":6.17206,"d":"6.172"},{"v":0.121053,"d":"0.121"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G38460.1"]
["Os02t0668100-02","Rice","geranylgeranyl diphosphate synthase 2Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-01);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-02);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-03);Similar to predicted protein. (Os02t0668100-04)","2",342,{"v":35962.4,"d":"35962.400"},{"v":6.17206,"d":"6.172"},{"v":0.121053,"d":"0.121"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G38460.1"]
["Os02t0668100-03","Rice","geranylgeranyl diphosphate synthase 2Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-01);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-02);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-03);Similar to predicted protein. (Os02t0668100-04)","2",342,{"v":35962.4,"d":"35962.400"},{"v":6.17206,"d":"6.172"},{"v":0.121053,"d":"0.121"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G38460.1"]
["Os02t0668100-04","Rice","geranylgeranyl diphosphate synthase 2Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-01);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-02);Similar to Geranylgeranyl-diphosphate synthase. (Os02t0668100-03);Similar to predicted protein. (Os02t0668100-04)","2",256,{"v":26805.4,"d":"26805.400"},{"v":5.63666,"d":"5.637"},{"v":0.120312,"d":"0.120"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,null,"AT4G38460.1"]
["Os02t0681100-01","Rice","Protein of unknown function DUF604 family protein. (Os02t0681100-01)","2",516,{"v":57765.7,"d":"57765.700"},{"v":10.0575,"d":"10.058"},{"v":-0.207171,"d":"-0.207"},"plasma membrane,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","golgi","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT5G41460.1"]
["Os02t0683500-01","Rice","Related to ABI3/VP1, RELATED TO ABSCISIC ACID INSENSITIVE3 (ABI3)/VIVIPAROUS1 (VP1) 6B3 DNA-binding domain-containing protein, Brassinosteroid (BR) homeostasis (Os02t0683500-01)","2",412,{"v":43950.2,"d":"43950.200"},{"v":8.13056,"d":"8.131"},{"v":-0.524029,"d":"-0.524"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G01030.1"]
["Os02t0702100-01","Rice","Similar to transcription factor GT-3b. (Os02t0702100-01)","2",109,{"v":12968.3,"d":"12968.300"},{"v":6.55087,"d":"6.551"},{"v":-1.1789,"d":"-1.179"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT2G38250.1"]
["Os02t0704000-01","Rice","9-CIS-EPOXYCAROTENOID DIOXYGENASE 1Carotenoid oxygenase family protein. (Os02t0704000-01)","2",638,{"v":68623.9,"d":"68623.900"},{"v":6.50811,"d":"6.508"},{"v":-0.147962,"d":"-0.148"},"plastid","mitochondrion,cytosol,extracellular,plastid","plastid",null,"extracellular","plastid","cytosol","cytosol,plastid","mitochondrion","plastid",null,"plastid","plastid","plastid",null,null,"AT4G19170.1"]
["Os02t0705400-01","Rice","Similar to Pathogen induced protein 2-4. (Os02t0705400-01);Similar to Pathogen induced protein 2-4. (Os02t0705400-02)","2",85,{"v":9773.54,"d":"9773.540"},{"v":4.71731,"d":"4.717"},{"v":-0.34,"d":"-0.340"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G21620.2"]
["Os02t0705400-02","Rice","Similar to Pathogen induced protein 2-4. (Os02t0705400-01);Similar to Pathogen induced protein 2-4. (Os02t0705400-02)","2",184,{"v":20449.6,"d":"20449.600"},{"v":5.15727,"d":"5.157"},{"v":-0.152174,"d":"-0.152"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G21620.1"]
["Os02t0706500-01","Rice","ATPase, AAA-type, core domain containing protein. (Os02t0706500-01);Similar to predicted protein. (Os02t0706500-02)","2",616,{"v":69225.1,"d":"69225.100"},{"v":9.74994,"d":"9.750"},{"v":-0.509253,"d":"-0.509"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","nucleus","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","cytosol",null,null,"AT2G18330.1"]
["Os02t0706500-02","Rice","ATPase, AAA-type, core domain containing protein. (Os02t0706500-01);Similar to predicted protein. (Os02t0706500-02)","2",117,{"v":13106.1,"d":"13106.100"},{"v":11.6148,"d":"11.615"},{"v":-0.191453,"d":"-0.191"},"mitochondrion","mitochondrion,endoplasmic reticulum,plastid,nucleus","plastid",null,"endoplasmic reticulum","mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT4G36580.1"]
["Os02t0717700-01","Rice","Acyl-CoA N-acyltransferase domain containing protein. (Os02t0717700-01)","2",157,{"v":16732.3,"d":"16732.300"},{"v":5.71054,"d":"5.711"},{"v":0.301911,"d":"0.302"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G15770.1"]
["Os02t0733500-01","Rice","CALMODULIN-LIKE PROTEIN 20EF-Hand type domain containing protein. (Os02t0733500-01)","2",174,{"v":18760.9,"d":"18760.900"},{"v":3.99264,"d":"3.993"},{"v":-0.227586,"d":"-0.228"},"mitochondrion","mitochondrion,vacuole,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","vacuole",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G18210.1"]
["Os02t0740300-01","Rice","ATPase, AAA-type, core domain containing protein. (Os02t0740300-01)","2",611,{"v":66367,"d":"66367.000"},{"v":6.44784,"d":"6.448"},{"v":-0.283961,"d":"-0.284"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT4G04180.1"]
["Os02t0761200-01","Rice","Armadillo-like helical domain containing protein. (Os02t0761200-01)","2",463,{"v":49134.9,"d":"49134.900"},{"v":4.65623,"d":"4.656"},{"v":-0.0153348,"d":"-0.015"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G33945.1"]
["Os02t0774200-01","Rice","Conserved hypothetical protein. (Os02t0774200-01)","2",101,{"v":11193.5,"d":"11193.500"},{"v":10.9768,"d":"10.977"},{"v":-0.150495,"d":"-0.150"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT2G31945.1"]
["Os02t0782500-01","Rice","18.0-KD CLASS III HEAT SHOCK PROTEINSimilar to Small heat stress protein class CIII. (Os02t0782500-01);Similar to 17.5 kDa class II heat shock protein. (Os02t0782500-02)","2",172,{"v":18604.1,"d":"18604.100"},8.268,{"v":-0.537791,"d":"-0.538"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:26035336,msms:plastid:27992503","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G54050.1"]
["Os02t0782500-02","Rice","18.0-KD CLASS III HEAT SHOCK PROTEINSimilar to Small heat stress protein class CIII. (Os02t0782500-01);Similar to 17.5 kDa class II heat shock protein. (Os02t0782500-02)","2",88,{"v":9247.87,"d":"9247.870"},{"v":6.12818,"d":"6.128"},{"v":-0.257955,"d":"-0.258"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G54050.1"]
["Os02t0782600-01","Rice","Synaptojanin, N-terminal domain containing protein. (Os02t0782600-01);Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os02t0782600-02)","2",370,{"v":40742.9,"d":"40742.900"},{"v":4.58022,"d":"4.580"},{"v":-0.492162,"d":"-0.492"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G43220.1"]
["Os02t0782600-02","Rice","Synaptojanin, N-terminal domain containing protein. (Os02t0782600-01);Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os02t0782600-02)","2",262,{"v":29157.7,"d":"29157.700"},{"v":5.11364,"d":"5.114"},{"v":-0.462977,"d":"-0.463"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G43220.1"]
["Os02t0784700-00","Rice","19S REGULATORY PARTICLE ATPASE SUBUNIT 1BSimilar to 26S protease regulatory subunit 7 (Fragment). (Os02t0784700-00)","2",188,{"v":21276.8,"d":"21276.800"},{"v":9.20162,"d":"9.202"},{"v":-0.367021,"d":"-0.367"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G53750.1"]
["Os02t0787600-01","Rice","Glutamate receptor homolog 1.2, GLUTAMATE RECEPTOR-LIKE 1.4Glutamate receptor-related domain containing protein. (Os02t0787600-01);Hypothetical conserved gene. (Os02t0787600-02)","2",988,{"v":107258,"d":"107258.000"},{"v":6.80177,"d":"6.802"},{"v":0.0413968,"d":"0.041"},"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT2G29100.1"]
["Os02t0787600-02","Rice","Glutamate receptor homolog 1.2, GLUTAMATE RECEPTOR-LIKE 1.4Glutamate receptor-related domain containing protein. (Os02t0787600-01);Hypothetical conserved gene. (Os02t0787600-02)","2",486,{"v":52874.2,"d":"52874.200"},{"v":6.00315,"d":"6.003"},{"v":0.0561728,"d":"0.056"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane,extracellular,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT2G24710.1"]
["Os02t0802500-01","Rice","Similar to H(+)-translocating (Pyrophosphate-ENERGIZED) inorganic pyrophosphatase beta-1 polypeptide (EC 3.6.1.1) (Fragment). (Os02t0802500-01);Similar to Proton translocating pyrophosphatase. (Os02t0802500-02)","2",762,{"v":79855.5,"d":"79855.500"},{"v":5.24403,"d":"5.244"},{"v":0.565617,"d":"0.566"},"plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","cytosol",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane","msms:plasma membrane:18260611,msms:vacuole:18557835,msms:plasma membrane:19502382,msms:plastid:21433289,msms:nucleus:26035336,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G15690.1"]
["Os02t0802500-02","Rice","Similar to H(+)-translocating (Pyrophosphate-ENERGIZED) inorganic pyrophosphatase beta-1 polypeptide (EC 3.6.1.1) (Fragment). (Os02t0802500-01);Similar to Proton translocating pyrophosphatase. (Os02t0802500-02)","2",563,{"v":58764.8,"d":"58764.800"},{"v":4.99105,"d":"4.991"},{"v":0.570693,"d":"0.571"},"cytosol,plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT1G15690.1"]
["Os02t0803600-01","Rice","VESICLE-ASSOCIATED MEMBRANE PROTEIN 7112Longin domain containing protein. (Os02t0803600-01)","2",226,{"v":25248.6,"d":"25248.600"},{"v":8.88299,"d":"8.883"},{"v":-0.0721239,"d":"-0.072"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT4G32150.1"]
["Os02t0806600-01","Rice","ENTH/VHS domain containing protein. (Os02t0806600-01);Conserved hypothetical protein. (Os02t0806600-02);ENTH/VHS domain containing protein. (Os02t0806600-03)","2",945,{"v":100397,"d":"100397.000"},{"v":6.03098,"d":"6.031"},{"v":-0.73164,"d":"-0.732"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G43160.1"]
["Os02t0806600-02","Rice","ENTH/VHS domain containing protein. (Os02t0806600-01);Conserved hypothetical protein. (Os02t0806600-02);ENTH/VHS domain containing protein. (Os02t0806600-03)","2",637,{"v":64922.2,"d":"64922.200"},{"v":5.15495,"d":"5.155"},{"v":-0.387127,"d":"-0.387"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"plastid",null,"plastid",null,"cytosol",null,null,"AT3G59290.1"]
["Os02t0806600-03","Rice","ENTH/VHS domain containing protein. (Os02t0806600-01);Conserved hypothetical protein. (Os02t0806600-02);ENTH/VHS domain containing protein. (Os02t0806600-03)","2",945,{"v":100397,"d":"100397.000"},{"v":6.03098,"d":"6.031"},{"v":-0.73164,"d":"-0.732"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G43160.1"]
["Os03t0110500-01","Rice","KIP1-like domain containing protein. (Os03t0110500-01)","3",351,{"v":38809,"d":"38809.000"},{"v":7.14205,"d":"7.142"},{"v":-0.415385,"d":"-0.415"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G48405.1"]
["Os03t0116000-00","Rice","Similar to 60Kd inner membrane protein, expressed. (Os03t0116000-00)","3",418,{"v":45349.8,"d":"45349.800"},{"v":9.06495,"d":"9.065"},{"v":0.0605263,"d":"0.061"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"plastid","mitochondrion","mitochondrion",null,null,"AT2G46470.1"]
["Os03t0132900-01","Rice","CHITINASE 11Similar to Chitinase 11. (Os03t0132900-01)","3",256,{"v":27749.4,"d":"27749.400"},{"v":6.89668,"d":"6.897"},{"v":-0.452734,"d":"-0.453"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","plastid","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","extracellular","extracellular","msms:extracellular:25047395,msms:extracellular:28232208","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G02360.1"]
["Os03t0143400-01","Rice","heat-shock protein 60Similar to mitochondrial chaperonin-60 [Oryza sativa (japonica cultivar-group)]. (Os03t0143400-01)","3",577,{"v":61048.9,"d":"61048.900"},{"v":5.38841,"d":"5.388"},{"v":-0.045234,"d":"-0.045"},"mitochondrion","mitochondrion,cytosol","cytosol",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:mitochondrion:16429260,msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:24083427,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT3G23990.1"]
["Os03t0146400-01","Rice","Pheophorbide a oxygenasePheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)","3",529,{"v":59077.3,"d":"59077.300"},{"v":8.04566,"d":"8.046"},{"v":-0.26087,"d":"-0.261"},"plastid","plasma membrane,peroxisome,plastid","plastid",null,null,"plastid","peroxisome","plastid","plastid","plastid",null,"plastid","plastid","plasma membrane","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G44880.1"]
["Os03t0146400-02","Rice","Pheophorbide a oxygenasePheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)","3",529,{"v":59077.3,"d":"59077.300"},{"v":8.04566,"d":"8.046"},{"v":-0.26087,"d":"-0.261"},"plastid","plasma membrane,peroxisome,plastid","plastid",null,null,"plastid","peroxisome","plastid","plastid","plastid",null,"plastid","plastid","plasma membrane",null,null,"AT3G44880.1"]
["Os03t0157900-01","Rice","Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT). (Os03t0157900-01)","3",426,{"v":44933.8,"d":"44933.800"},{"v":8.44672,"d":"8.447"},{"v":-0.0190141,"d":"-0.019"},"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plasma membrane:18260611,msms:extracellular:19038476,msms:plastid:21433289,msms:extracellular:24083427,msms:golgi:25047511,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT4G35630.1"]
["Os03t0168200-01","Rice","Similar to F16A14.21. (Os03t0168200-01)","3",265,{"v":28806.4,"d":"28806.400"},{"v":7.50622,"d":"7.506"},{"v":-0.470566,"d":"-0.471"},"plastid","cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G13990.1"]
["Os03t0172000-01","Rice","\"MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3\", \"MODIFIER OF SNC1, 3\", SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96Peptidase S59, nucleoporin family protein. (Os03t0172000-01);Similar to predicted protein. (Os03t0172000-02)","3",{"v":1005,"d":"1,005"},{"v":113581,"d":"113581.000"},{"v":4.82819,"d":"4.828"},{"v":-0.271443,"d":"-0.271"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G80680.1"]
["Os03t0172000-02","Rice","\"MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3\", \"MODIFIER OF SNC1, 3\", SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96Peptidase S59, nucleoporin family protein. (Os03t0172000-01);Similar to predicted protein. (Os03t0172000-02)","3",644,{"v":73790,"d":"73790.000"},{"v":4.5462,"d":"4.546"},{"v":-0.159783,"d":"-0.160"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G80680.1"]
["Os03t0182000-00","Rice","Similar to flavin-dependent monooxygenase 1. (Os03t0182000-00)","3",554,{"v":61093.5,"d":"61093.500"},{"v":10.7063,"d":"10.706"},{"v":-0.584838,"d":"-0.585"},"mitochondrion,cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT1G19250.1"]
["Os03t0194600-01","Rice","Protein of unknown function DUF568, DOMON-like domain containing protein. (Os03t0194600-01)","3",193,{"v":19874.4,"d":"19874.400"},{"v":9.78744,"d":"9.787"},{"v":0.0777202,"d":"0.078"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","mitochondrion","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:19226311,msms:extracellular:28232208","19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G48750.1"]
["Os03t0201000-01","Rice","Conserved hypothetical protein. (Os03t0201000-01)","3",327,{"v":34728.9,"d":"34728.900"},{"v":4.61368,"d":"4.614"},{"v":-0.210092,"d":"-0.210"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G54540.1"]
["Os03t0213100-01","Rice","Similar to Sec61p. (Os03t0213100-01);Similar to Sec61p. (Os03t0213100-02)","3",475,{"v":52266.5,"d":"52266.500"},{"v":9.24965,"d":"9.250"},{"v":0.508421,"d":"0.508"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","golgi","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","endoplasmic reticulum","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT2G34250.1"]
["Os03t0213100-02","Rice","Similar to Sec61p. (Os03t0213100-01);Similar to Sec61p. (Os03t0213100-02)","3",444,{"v":48715,"d":"48715.000"},{"v":8.79472,"d":"8.795"},{"v":0.524099,"d":"0.524"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G34250.1"]
["Os03t0214100-01","Rice","REPLICATION PROTEIN A 1Replication protein A1. (Os03t0214100-01)","3",630,{"v":69607.4,"d":"69607.400"},{"v":5.39235,"d":"5.392"},{"v":-0.239524,"d":"-0.240"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G08020.1"]
["Os03t0220700-01","Rice","Similar to (RAP Annotation release2) Peptidase. (Os03t0220700-01);Conserved hypothetical protein. (Os03t0220700-02)","3",56,{"v":6507.58,"d":"6507.580"},{"v":5.60583,"d":"5.606"},{"v":-0.564286,"d":"-0.564"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G40100.1"]
["Os03t0220700-02","Rice","Similar to (RAP Annotation release2) Peptidase. (Os03t0220700-01);Conserved hypothetical protein. (Os03t0220700-02)","3",150,{"v":17066.7,"d":"17066.700"},{"v":10.0753,"d":"10.075"},{"v":-0.154667,"d":"-0.155"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"nucleus","peroxisome",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G12145.1"]
["Os03t0225600-01","Rice","Conserved oligomeric complex COG6 family protein. (Os03t0225600-01)","3",114,{"v":12710.2,"d":"12710.200"},{"v":4.87269,"d":"4.873"},{"v":-0.285965,"d":"-0.286"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G31780.1"]
["Os03t0228200-01","Rice","Conserved hypothetical protein. (Os03t0228200-01)","3",299,{"v":31761.7,"d":"31761.700"},{"v":7.08829,"d":"7.088"},{"v":-0.152843,"d":"-0.153"},"plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"mitochondrion","plastid","cytosol","plastid",null,"plastid",null,"plastid","plastid","plasma membrane",null,null,"AT1G19400.1"]
["Os03t0238300-01","Rice","Endonuclease/exonuclease/phosphatase domain containing protein. (Os03t0238300-01);Similar to type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (Os03t0238300-02)","3",495,{"v":54445.2,"d":"54445.200"},8.805,{"v":-0.47596,"d":"-0.476"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G01900.3"]
["Os03t0238300-02","Rice","Endonuclease/exonuclease/phosphatase domain containing protein. (Os03t0238300-01);Similar to type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2. (Os03t0238300-02)","3",142,{"v":16048.7,"d":"16048.700"},{"v":9.47933,"d":"9.479"},{"v":-0.717606,"d":"-0.718"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G01900.1"]
["Os03t0241800-00","Rice","Similar to predicted protein. (Os03t0241800-00)","3",664,{"v":73406.7,"d":"73406.700"},{"v":7.99076,"d":"7.991"},{"v":0.0537651,"d":"0.054"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","nucleus","mitochondrion,cytosol,plastid,nucleus",null,"mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT3G49142.1"]
["Os03t0246050-01","Rice","Hypothetical gene. (Os03t0246050-01)","3",115,{"v":13040,"d":"13040.000"},{"v":11.65,"d":"11.650"},{"v":-0.290435,"d":"-0.290"},"extracellular,vacuole","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","extracellular",null,null,"AT5G51580.1"]
["Os03t0256800-00","Rice","Similar to RhoGAP domain containing protein, expressed. (Os03t0256800-00)","3",496,{"v":54733.7,"d":"54733.700"},{"v":4.29599,"d":"4.296"},{"v":-0.557258,"d":"-0.557"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G24580.1"]
["Os03t0275800-01","Rice","Hypothetical protein. (Os03t0275800-01)","3",92,{"v":10304.5,"d":"10304.500"},12.348,{"v":-0.871739,"d":"-0.872"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"plastid","cytosol","nucleus",null,null,"AT3G56050.1"]
["Os03t0281300-01","Rice","phosphotransferase system, PEP-utilising enzyme, N-terminal domain containing protein. (Os03t0281300-01)","3",654,{"v":74261.4,"d":"74261.400"},{"v":6.52951,"d":"6.530"},{"v":-0.506728,"d":"-0.507"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G13560.1"]
["Os03t0297000-01","Rice","Protein of unknown function DUF538 family protein. (Os03t0297000-01);Protein of unknown function DUF538 family protein. (Os03t0297000-02)","3",170,{"v":18864.6,"d":"18864.600"},{"v":8.21368,"d":"8.214"},{"v":-0.350588,"d":"-0.351"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G08890.1"]
["Os03t0297000-02","Rice","Protein of unknown function DUF538 family protein. (Os03t0297000-01);Protein of unknown function DUF538 family protein. (Os03t0297000-02)","3",170,{"v":18864.6,"d":"18864.600"},{"v":8.21368,"d":"8.214"},{"v":-0.350588,"d":"-0.351"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G08890.1"]
["Os03t0310600-01","Rice","Protein of unknown function DUF247, plant family protein. (Os03t0310600-01)","3",420,{"v":46498.3,"d":"46498.300"},{"v":6.50933,"d":"6.509"},{"v":-0.260952,"d":"-0.261"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G50150.1"]
["Os03t0314400-01","Rice","Pentatricopeptide repeat domain containing protein. (Os03t0314400-01)","3",648,{"v":71499.6,"d":"71499.600"},{"v":6.93556,"d":"6.936"},{"v":0.0608025,"d":"0.061"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","mitochondrion,plastid","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G08070.1"]
["Os03t0363200-01","Rice","Protein of unknown function DUF455 family protein. (Os03t0363200-01)","3",372,{"v":40266.3,"d":"40266.300"},{"v":5.31867,"d":"5.319"},{"v":-0.390054,"d":"-0.390"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G04520.1"]
["Os03t0366000-01","Rice","Similar to Chaperonin. (Os03t0366000-01)","3",98,{"v":10821.3,"d":"10821.300"},{"v":7.53609,"d":"7.536"},{"v":-0.284694,"d":"-0.285"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:plastid:27992503","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G14980.1"]
["Os03t0570800-01","Rice","Multi antimicrobial extrusion protein MatE family protein. (Os03t0570800-01)","3",500,{"v":53842.5,"d":"53842.500"},{"v":7.35176,"d":"7.352"},0.702,"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",null,"vacuole",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT3G21690.1"]
["Os03t0574900-01","Rice","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 27Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os03t0574900-01)","3",811,{"v":91814.9,"d":"91814.900"},{"v":7.23584,"d":"7.236"},{"v":0.225031,"d":"0.225"},"cytosol","mitochondrion,nucleus,cytosol,vacuole,plasma membrane","nucleus",{"$nulls":3},"cytosol","plasma membrane,vacuole",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT1G60160.1"]
["Os03t0580200-01","Rice","Lipase, GDSL domain containing protein. (Os03t0580200-01)","3",164,{"v":17699.2,"d":"17699.200"},{"v":8.12842,"d":"8.128"},{"v":0.12378,"d":"0.124"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","extracellular,plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G71691.1"]
["Os03t0582200-01","Rice","SCAMP4SCAMP family protein. (Os03t0582200-01);SCAMP family protein. (Os03t0582200-02)","3",313,{"v":35106.4,"d":"35106.400"},{"v":8.42226,"d":"8.422"},{"v":0.0549521,"d":"0.055"},"cytosol","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT1G11180.1"]
["Os03t0582200-02","Rice","SCAMP4SCAMP family protein. (Os03t0582200-01);SCAMP family protein. (Os03t0582200-02)","3",313,{"v":35106.4,"d":"35106.400"},{"v":8.42226,"d":"8.422"},{"v":0.0549521,"d":"0.055"},"cytosol","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT1G61250.1"]
["Os03t0582300-01","Rice","ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 42Similar to SC3 protein. (Os03t0582300-01)","3",36,{"v":4263.02,"d":"4263.020"},{"v":9.17177,"d":"9.172"},{"v":-0.691667,"d":"-0.692"},"mitochondrion,cytosol,peroxisome","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"peroxisome","plasma membrane",null,"mitochondrion","peroxisome","mitochondrion",null,"cytosol",null,null,"AT1G11180.1"]
["Os03t0599800-01","Rice","UDP-ARABINOPYRANOSE MUTASE 1Reversibly glycosylated polypeptide. (Os03t0599800-01)","3",364,{"v":41350.8,"d":"41350.800"},{"v":6.0622,"d":"6.062"},{"v":-0.224725,"d":"-0.225"},"extracellular","mitochondrion,cytosol,golgi","cytosol",null,"golgi",null,"cytosol","golgi",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:17951457,msms:extracellular:18372294,msms:extracellular:19038476,msms:extracellular:21347307,msms:extracellular:24083427,msms:nucleus:24133045,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,24133045:Dinesh Kumar:DK:Jaiswal,Doel:D:Ray,Mani Kant:MK:Choudhary,Pratigya:P:Subba,Amit:A:Kumar,Jitendra:J:Verma,Rajiv:R:Kumar,Asis:A:Datta,Subhra:S:Chakraborty,Niranjan:N:Chakraborty:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17951457:Jinming:J:Zhu,Sophie:S:Alvarez,Ellen L:EL:Marsh,Mary E:ME:Lenoble,In-Jeong:IJ:Cho,Mayandi:M:Sivaguru,Sixue:S:Chen,Henry T:HT:Nguyen,Yajun:Y:Wu,Daniel P:DP:Schachtman,Robert E:RE:Sharp:2007,21347307:Lu:L:Zhou,Saleem A:SA:Bokhari,Chun-Juan:CJ:Dong,Jin-Yuan:JY:Liu:2011,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT5G15650.1"]
["Os03t0643300-02","Rice","ornithine delta-aminotransferase, ornithine aminotransferaseOrnithine delta-aminotransferase, Abiotic stress tolerance (Os03t0643300-02)","3",473,{"v":51445.3,"d":"51445.300"},{"v":7.65761,"d":"7.658"},{"v":-0.157928,"d":"-0.158"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009","AT5G46180.1"]
["Os03t0646800-01","Rice","Similar to DNA-directed RNA polymerase. (Os03t0646800-01);RNA polymerase, beta subunit, protrusion domain containing protein. (Os03t0646800-02)","3",195,{"v":22048.6,"d":"22048.600"},{"v":4.17194,"d":"4.172"},{"v":-0.686154,"d":"-0.686"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"plastid",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G21710.1"]
["Os03t0646800-02","Rice","Similar to DNA-directed RNA polymerase. (Os03t0646800-01);RNA polymerase, beta subunit, protrusion domain containing protein. (Os03t0646800-02)","3",162,{"v":17673.1,"d":"17673.100"},{"v":3.77517,"d":"3.775"},{"v":-0.649383,"d":"-0.649"},"mitochondrion,endoplasmic reticulum,extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","mitochondrion","extracellular","nucleus",null,"mitochondrion",null,"mitochondrion",null,"endoplasmic reticulum",null,null,"AT4G21710.1"]
["Os03t0655000-01","Rice","Hypothetical protein. (Os03t0655000-01)","3",161,{"v":17448.8,"d":"17448.800"},{"v":8.74839,"d":"8.748"},{"v":0.51118,"d":"0.511"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular"]
["Os03t0673400-01","Rice","Conserved hypothetical protein. (Os03t0673400-01)","3",80,{"v":7892.17,"d":"7892.170"},{"v":8.13379,"d":"8.134"},-0.125,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G27330.1"]
["Os03t0674900-00","Rice","Hypothetical conserved gene. (Os03t0674900-00)","3",152,{"v":14900,"d":"14900.000"},{"v":10.6809,"d":"10.681"},{"v":-0.115789,"d":"-0.116"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","nucleus","plastid,nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT3G27925.1"]
["Os03t0675700-01","Rice","Conserved hypothetical protein. (Os03t0675700-01)","3",79,{"v":8781.47,"d":"8781.470"},{"v":10.9149,"d":"10.915"},{"v":-0.981013,"d":"-0.981"},"cytosol,golgi","mitochondrion,nucleus,cytosol,golgi,plastid","nucleus",{"$nulls":3},"golgi","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G65880.1"]
["Os03t0687700-01","Rice","endosperm-specific gene 52Ribosome-inactivating protein domain containing protein. (Os03t0687700-01)","3",244,{"v":26767.9,"d":"26767.900"},{"v":7.1928,"d":"7.193"},{"v":-0.146311,"d":"-0.146"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT2G33540.2"]
["Os03t0724500-01","Rice","Conserved hypothetical protein. (Os03t0724500-01)","3",103,{"v":11473.6,"d":"11473.600"},{"v":7.5823,"d":"7.582"},{"v":-0.696117,"d":"-0.696"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus",null,null,"AT3G05570.1"]
["Os03t0725200-01","Rice","Hypothetical protein. (Os03t0725200-01)","3",116,{"v":11988.9,"d":"11988.900"},{"v":7.52621,"d":"7.526"},{"v":-0.508621,"d":"-0.509"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT2G14247.1"]
["Os03t0725300-01","Rice","DBR1Metallophosphoesterase domain containing protein. (Os03t0725300-01);Similar to Dbr1-prov protein. (Os03t0725300-02)","3",407,{"v":46683.1,"d":"46683.100"},{"v":5.57305,"d":"5.573"},{"v":-0.516216,"d":"-0.516"},"cytosol","mitochondrion,cytosol,nucleus","cytosol",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G31770.1"]
["Os03t0725300-02","Rice","DBR1Metallophosphoesterase domain containing protein. (Os03t0725300-01);Similar to Dbr1-prov protein. (Os03t0725300-02)","3",108,{"v":12483,"d":"12483.000"},{"v":4.5217,"d":"4.522"},{"v":-0.156481,"d":"-0.156"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G31770.1"]
["Os03t0729000-01","Rice","EGY3Similar to Peptidase, M50 family. (Os03t0729000-01)","3",586,{"v":62798.1,"d":"62798.100"},{"v":5.31873,"d":"5.319"},{"v":0.0329352,"d":"0.033"},"plastid","cytosol,plastid","plastid",null,null,"plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G17870.1"]
["Os03t0739700-01","Rice","Uncharacterised protein family UPF0114 domain containing protein. (Os03t0739700-01)","3",344,{"v":35665.8,"d":"35665.800"},{"v":11.0039,"d":"11.004"},{"v":0.222384,"d":"0.222"},"plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"cytosol","plastid","cytosol","mitochondrion,plasma membrane","plastid","mitochondrion",null,"mitochondrion","plasma membrane","plastid",null,null,"AT4G19390.1"]
["Os03t0764900-01","Rice","DNA BINDING WITH ONE FINGER 15Similar to Zn finger protein (Fragment). (Os03t0764900-01)","3",359,{"v":36699.5,"d":"36699.500"},{"v":9.64584,"d":"9.646"},{"v":-0.249861,"d":"-0.250"},"nucleus","plastid,nucleus","nucleus",null,null,"plastid","nucleus","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT1G07640.2"]
["Os03t0766900-01","Rice","Allene oxide synthase. (Os03t0766900-01);Allene oxide synthase. (Os03t0766900-02)","3",281,{"v":30421.9,"d":"30421.900"},{"v":4.33215,"d":"4.332"},{"v":-0.0960854,"d":"-0.096"},"cytosol,plastid,nucleus","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT3G18940.1"]
["Os03t0766900-02","Rice","Allene oxide synthase. (Os03t0766900-01);Allene oxide synthase. (Os03t0766900-02)","3",281,{"v":30421.9,"d":"30421.900"},{"v":4.33215,"d":"4.332"},{"v":-0.0960854,"d":"-0.096"},"cytosol,plastid,nucleus","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT3G18940.1"]
["Os03t0797500-01","Rice","Similar to Indole-3-glycerol phosphate lyase (Fragment). (Os03t0797500-01)","3",323,{"v":33476.4,"d":"33476.400"},{"v":8.79508,"d":"8.795"},{"v":0.133127,"d":"0.133"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G02610.1"]
["Os03t0822700-01","Rice","Armadillo-like helical domain containing protein. (Os03t0822700-01);Similar to Armadillo/beta-catenin-like repeat family protein. (Os03t0822700-02)","3",379,{"v":41104.6,"d":"41104.600"},{"v":4.78687,"d":"4.787"},{"v":-0.528496,"d":"-0.528"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G09350.1"]
["Os03t0822700-02","Rice","Armadillo-like helical domain containing protein. (Os03t0822700-01);Similar to Armadillo/beta-catenin-like repeat family protein. (Os03t0822700-02)","3",305,{"v":33358.4,"d":"33358.400"},{"v":4.61852,"d":"4.619"},{"v":-0.606557,"d":"-0.607"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G09350.1"]
["Os03t0829200-01","Rice","Similar to Soluble epoxide hydrolase. (Os03t0829200-01);Similar to epoxide hydrolase 2. (Os03t0829200-02)","3",338,{"v":37521.5,"d":"37521.500"},{"v":5.80596,"d":"5.806"},{"v":-0.117456,"d":"-0.117"},"cytosol,peroxisome,plastid","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome",null,null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G02340.1"]
["Os03t0829200-02","Rice","Similar to Soluble epoxide hydrolase. (Os03t0829200-01);Similar to epoxide hydrolase 2. (Os03t0829200-02)","3",206,{"v":23176.9,"d":"23176.900"},{"v":7.1064,"d":"7.106"},{"v":0.162136,"d":"0.162"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"cytosol",null,"peroxisome","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G15955.1"]
["Os03t0839800-01","Rice","Protein of unknown function DUF688 domain containing protein. (Os03t0839800-01)","3",140,{"v":14356.9,"d":"14356.900"},{"v":10.6608,"d":"10.661"},{"v":-0.294286,"d":"-0.294"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G21695.1"]
["Os03t0841700-02","Rice","Similar to Prohibitin. (Os03t0841700-02)","3",290,{"v":32191.9,"d":"32191.900"},10.218,{"v":-0.256207,"d":"-0.256"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","cytosol","mitochondrion",null,"mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:plastid:27992503,msms:plasma membrane:28056797","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,28056797:Ning:N:Yang,Tai:T:Wang:2017,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G03860.1"]
["Os03t0848200-01","Rice","PURPLE ACID PHOSPHATASE 15Similar to Phytase. (Os03t0848200-01)","3",452,{"v":50618.3,"d":"50618.300"},{"v":5.53418,"d":"5.534"},{"v":-0.30708,"d":"-0.307"},"cytosol","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"cytosol","extracellular,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G07130.1"]
["Os03t0852500-01","Rice","Similar to NIR3. (Os03t0852500-01)","3",158,{"v":16871.3,"d":"16871.300"},{"v":11.0485,"d":"11.049"},{"v":-0.524051,"d":"-0.524"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,plastid,nucleus",null,"mitochondrion",null,null,"plastid","mitochondrion",null,null,"AT1G73940.1"]
["Os04t0103601-01","Rice","Conserved hypothetical protein. (Os04t0103601-01)","4",84,{"v":9347.28,"d":"9347.280"},{"v":8.52886,"d":"8.529"},{"v":-0.207143,"d":"-0.207"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G54390.2"]
["Os04t0105500-01","Rice","Similar to B0616E02-H0507E05.4 protein. (Os04t0105500-01);Similar to B0616E02-H0507E05.4 protein. (Os04t0105500-02)","4",243,{"v":26899.5,"d":"26899.500"},{"v":8.49892,"d":"8.499"},{"v":-0.222222,"d":"-0.222"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G25280.2"]
["Os04t0105500-02","Rice","Similar to B0616E02-H0507E05.4 protein. (Os04t0105500-01);Similar to B0616E02-H0507E05.4 protein. (Os04t0105500-02)","4",281,{"v":30855.2,"d":"30855.200"},{"v":9.23342,"d":"9.233"},{"v":-0.214591,"d":"-0.215"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G25280.2"]
["Os04t0111100-00","Rice","Similar to H0215A08.1 protein. (Os04t0111100-00)","4",{"v":1105,"d":"1,105"},{"v":124635,"d":"124635.000"},{"v":6.92113,"d":"6.921"},{"v":-0.166425,"d":"-0.166"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","cytosol,plasma membrane",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G14460.1"]
["Os04t0117900-01","Rice","Amidase family protein. (Os04t0117900-01)","4",434,{"v":45664.5,"d":"45664.500"},{"v":5.48536,"d":"5.485"},{"v":0.168894,"d":"0.169"},"plasma membrane,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G08980.1"]
["Os04t0127500-01","Rice","WALL-ASSOCIATED KINASE GENE 29Serine/threonine protein kinase-related domain containing protein. (Os04t0127500-01)","4",673,{"v":74038.5,"d":"74038.500"},{"v":6.58139,"d":"6.581"},{"v":-0.0735513,"d":"-0.074"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G21210.1"]
["Os04t0271200-01","Rice","PASTICCINO2, PASTICCINO 2Protein-tyrosine phosphatase-like, PTPLA domain containing protein. (Os04t0271200-01)","4",221,{"v":25018.7,"d":"25018.700"},{"v":9.76494,"d":"9.765"},{"v":0.499095,"d":"0.499"},"endoplasmic reticulum","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","endoplasmic reticulum",null,null,"AT5G10480.1"]
["Os04t0286300-01","Rice","WALL-ASSOCIATED KINASE GENE 33Conserved hypothetical protein. (Os04t0286300-01)","4",450,{"v":49554.3,"d":"49554.300"},{"v":4.76332,"d":"4.763"},{"v":-0.0502222,"d":"-0.050"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","vacuole","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G21240.1"]
["Os04t0288500-01","Rice","Protein kinase, catalytic domain domain containing protein. (Os04t0288500-01)","4",746,{"v":80094.8,"d":"80094.800"},{"v":5.64459,"d":"5.645"},{"v":-0.125603,"d":"-0.126"},"plasma membrane","mitochondrion,nucleus,vacuole,plasma membrane,plastid","nucleus",null,null,"mitochondrion","vacuole","nucleus","plastid","plastid",null,"mitochondrion","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G53810.1"]
["Os04t0308000-01","Rice","WALL-ASSOCIATED KINASE GENE 35Conserved hypothetical protein. (Os04t0308000-01);Non-protein coding transcript. (Os04t0308000-02);Non-protein coding transcript. (Os04t0308000-03)","4",31,{"v":3394.2,"d":"3394.200"},{"v":6.49231,"d":"6.492"},{"v":0.43871,"d":"0.439"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G70440.1"]
["Os04t0323500-01","Rice","Hypothetical protein. (Os04t0323500-01);Conserved hypothetical protein. (Os04t0323500-02)","4",112,{"v":11945.1,"d":"11945.100"},{"v":9.4841,"d":"9.484"},{"v":-0.864286,"d":"-0.864"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT1G17220.1"]
["Os04t0323500-02","Rice","Hypothetical protein. (Os04t0323500-01);Conserved hypothetical protein. (Os04t0323500-02)","4",54,{"v":6262.65,"d":"6262.650"},{"v":8.23674,"d":"8.237"},{"v":-0.272222,"d":"-0.272"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G48050.3"]
["Os04t0352400-01","Rice","FK506 binding protein 62b, FK506 binding protein 65Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os04t0352400-01)","4",585,{"v":65572.9,"d":"65572.900"},{"v":5.12594,"d":"5.126"},{"v":-0.672137,"d":"-0.672"},"mitochondrion,plasma membrane","mitochondrion,cytosol,vacuole,nucleus","nucleus",{"$nulls":3},"cytosol","vacuole",null,"mitochondrion",null,null,"nucleus","cytosol","msms:mitochondrion:15069638,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT3G25230.2"]
["Os04t0359700-00","Rice","Hypothetical conserved gene. (Os04t0359700-00)","4",361,{"v":38985.4,"d":"38985.400"},{"v":10.2232,"d":"10.223"},{"v":-0.0977839,"d":"-0.098"},"mitochondrion,cytosol,peroxisome,plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","cytosol",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G13010.1"]
["Os04t0370900-01","Rice","Similar to H0607F01.5 protein. (Os04t0370900-01);Similar to cDNA, clone: J013067H13, full insert sequence. (Os04t0370900-02)","4",757,{"v":82925.9,"d":"82925.900"},{"v":6.95371,"d":"6.954"},{"v":-0.0626156,"d":"-0.063"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT1G21210.1"]
["Os04t0370900-02","Rice","Similar to H0607F01.5 protein. (Os04t0370900-01);Similar to cDNA, clone: J013067H13, full insert sequence. (Os04t0370900-02)","4",728,{"v":79774.8,"d":"79774.800"},{"v":6.65827,"d":"6.658"},{"v":-0.103022,"d":"-0.103"},"plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G21210.1"]
["Os04t0387000-00","Rice","Hypothetical conserved gene. (Os04t0387000-00)","4",114,{"v":12092.3,"d":"12092.300"},{"v":10.7327,"d":"10.733"},{"v":-0.304386,"d":"-0.304"},"mitochondrion","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,null,"mitochondrion","peroxisome","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion",null,null,"AT3G01960.1"]
["Os04t0402100-01","Rice","CALNEXINSimilar to Calnexin (Fragment). (Os04t0402100-01);Similar to calnexin. (Os04t0402100-02)","4",537,{"v":60732.4,"d":"60732.400"},{"v":4.44881,"d":"4.449"},{"v":-0.737244,"d":"-0.737"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","endoplasmic reticulum","msms:plasma membrane:15069638,msms:plasma membrane:18260611,msms:mitochondrion:19010998,msms:plastid:21433289,msms:plastid:27992503,msms:plasma membrane:28056797","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,28056797:Ning:N:Yang,Tai:T:Wang:2017,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G61790.1"]
["Os04t0402100-02","Rice","CALNEXINSimilar to Calnexin (Fragment). (Os04t0402100-01);Similar to calnexin. (Os04t0402100-02)","4",200,{"v":22215.5,"d":"22215.500"},{"v":4.63346,"d":"4.633"},-0.445,"plasma membrane","mitochondrion,endoplasmic reticulum,nucleus","nucleus",null,"endoplasmic reticulum",null,"nucleus","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"endoplasmic reticulum","msms:plasma membrane:18557835,msms:plastid:21433289,msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT5G07340.1"]
["Os04t0412300-01","Rice","Similar to H0717B12.10 protein. (Os04t0412300-01);Glycoside hydrolase, family 17 protein. (Os04t0412300-02)","4",407,{"v":43909.4,"d":"43909.400"},{"v":4.86697,"d":"4.867"},{"v":-0.0351351,"d":"-0.035"},"vacuole,plasma membrane,plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"vacuole","plastid","vacuole","cytosol,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT2G27500.2"]
["Os04t0412300-02","Rice","Similar to H0717B12.10 protein. (Os04t0412300-01);Glycoside hydrolase, family 17 protein. (Os04t0412300-02)","4",393,{"v":42043.4,"d":"42043.400"},{"v":4.63662,"d":"4.637"},{"v":0.0791349,"d":"0.079"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"vacuole","plastid","vacuole","cytosol,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:extracellular:23159799","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013","AT2G27500.2"]
["Os04t0447700-01","Rice","Similar to Polyketide reductase. (Os04t0447700-01)","4",357,{"v":39543.8,"d":"39543.800"},{"v":8.60692,"d":"8.607"},{"v":-0.201961,"d":"-0.202"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT1G59950.1"]
["Os04t0452700-01","Rice","monosaccharide transporter 1Similar to Monosaccharide transporter 1. (Os04t0452700-01)","4",517,{"v":55244.1,"d":"55244.100"},{"v":10.1941,"d":"10.194"},{"v":0.622631,"d":"0.623"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G34580.1"]
["Os04t0464966-01","Rice","F-box protein 217, MEIOTIC F-BOXF-box-containing protein, Male meiotic DNA double-strand break repair, Regulation of meiotic progression (Os04t0464966-01)","4",475,{"v":53066.5,"d":"53066.500"},{"v":9.23062,"d":"9.231"},{"v":-0.369474,"d":"-0.369"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT2G42720.1"]
["Os04t0476400-01","Rice","Similar to OSIGBa0106G07.13 protein. (Os04t0476400-01)","4",108,{"v":12260.8,"d":"12260.800"},{"v":4.74853,"d":"4.749"},{"v":0.102778,"d":"0.103"},"mitochondrion","mitochondrion,extracellular,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","extracellular",null,null,"AT4G20325.1"]
["Os04t0488100-01","Rice","RAD21-2 PROTEINRad21/Rec8 like protein, C-terminal domain containing protein. (Os04t0488100-01)","4",749,{"v":84170.3,"d":"84170.300"},{"v":6.02827,"d":"6.028"},{"v":-0.667824,"d":"-0.668"},"vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","nucleus",null,null,"AT5G40840.1"]
["Os04t0490500-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 152Protein kinase-like domain domain containing protein. (Os04t0490500-01)","4",148,{"v":16601.2,"d":"16601.200"},{"v":9.72814,"d":"9.728"},{"v":-0.264189,"d":"-0.264"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G30730.2"]
["Os04t0500600-01","Rice","Hypothetical protein. (Os04t0500600-01)","4",101,{"v":11262.6,"d":"11262.600"},{"v":12.0418,"d":"12.042"},{"v":-0.60297,"d":"-0.603"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT5G18020.1"]
["Os04t0508500-01","Rice","R2R3-MYBSimilar to OSIGBa0101P20.9 protein. (Os04t0508500-01)","4",281,{"v":30660.9,"d":"30660.900"},{"v":7.57207,"d":"7.572"},{"v":-0.639858,"d":"-0.640"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G13480.1"]
["Os04t0516800-01","Rice","Hypothetical protein. (Os04t0516800-01)","4",167,{"v":18402.5,"d":"18402.500"},{"v":7.97344,"d":"7.973"},{"v":-0.782635,"d":"-0.783"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G24120.1"]
["Os04t0530200-01","Rice","Similar to OSIGBa0155K17.10 protein. (Os04t0530200-01)","4",45,{"v":5008.33,"d":"5008.330"},10.877,{"v":-0.526667,"d":"-0.527"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G05360.1"]
["Os04t0538000-01","Rice","Tetratricopeptide TPR-1 domain containing protein. (Os04t0538000-01);Hypothetical gene. (Os04t0538000-02)","4",607,{"v":67928.2,"d":"67928.200"},{"v":7.30956,"d":"7.310"},{"v":-0.843987,"d":"-0.844"},"cytosol","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid",null,"cytosol",null,null,"AT1G62740.1"]
["Os04t0538000-02","Rice","Tetratricopeptide TPR-1 domain containing protein. (Os04t0538000-01);Hypothetical gene. (Os04t0538000-02)","4",91,{"v":9617.62,"d":"9617.620"},{"v":11.0169,"d":"11.017"},{"v":0.249451,"d":"0.249"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"nucleus","mitochondrion","extracellular","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT1G64840.1"]
["Os04t0540500-01","Rice","Hypothetical protein. (Os04t0540500-01)","4",90,{"v":10423.3,"d":"10423.300"},{"v":10.7637,"d":"10.764"},{"v":0.594444,"d":"0.594"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","extracellular","plasma membrane","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","extracellular",null,null,"AT5G44785.1"]
["Os04t0543700-01","Rice","Serine protease 2, Subtilisin 42, SUBTILISIN 42Similar to Serine proteinase (Fragment). (Os04t0543700-01)","4",815,{"v":86223.8,"d":"86223.800"},{"v":6.71403,"d":"6.714"},{"v":0.0132515,"d":"0.013"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,null,"AT2G19170.2"]
["Os04t0556500-01","Rice","CIS-ZEATIN O-GLUCOSYLTRANSFERASE 1cis-Zeatin-O-glucosyltransferase, Catalyze O-glucosylation of cZ and cZ-riboside (Os04t0556500-01)","4",463,{"v":50964.1,"d":"50964.100"},{"v":6.0582,"d":"6.058"},{"v":-0.0885529,"d":"-0.089"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"plastid","peroxisome","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G15490.1"]
["Os04t0569000-01","Rice","replication factor C subunit 4, replication factor C4Similar to Replication factor C 40kDa subunit. (Os04t0569000-01)","4",335,{"v":36902.6,"d":"36902.600"},{"v":7.45665,"d":"7.457"},{"v":-0.0916418,"d":"-0.092"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus","msms:nucleus:19621931,msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G63160.1"]
["Os04t0573900-01","Rice","P-450 704A3Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-01);Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-02);Similar to cytochrome P450. (Os04t0573900-03)","4",506,{"v":58172.2,"d":"58172.200"},{"v":8.39921,"d":"8.399"},{"v":-0.221937,"d":"-0.222"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G45510.1"]
["Os04t0573900-02","Rice","P-450 704A3Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-01);Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-02);Similar to cytochrome P450. (Os04t0573900-03)","4",506,{"v":58172.2,"d":"58172.200"},{"v":8.39921,"d":"8.399"},{"v":-0.221937,"d":"-0.222"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT2G45510.1"]
["Os04t0573900-03","Rice","P-450 704A3Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-01);Similar to cDNA clone:001-036-C03, full insert sequence. (Os04t0573900-02);Similar to cytochrome P450. (Os04t0573900-03)","4",402,{"v":46031.6,"d":"46031.600"},{"v":8.72134,"d":"8.721"},{"v":-0.14801,"d":"-0.148"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G63710.1"]
["Os04t0577000-01","Rice","Similar to H0404F02.2 protein. (Os04t0577000-01);Similar to H0404F02.2 protein. (Os04t0577000-02)","4",320,{"v":35552.7,"d":"35552.700"},{"v":5.71734,"d":"5.717"},{"v":-0.64625,"d":"-0.646"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"nucleus","plastid","cytosol","plasma membrane,plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G21270.1"]
["Os04t0577000-02","Rice","Similar to H0404F02.2 protein. (Os04t0577000-01);Similar to H0404F02.2 protein. (Os04t0577000-02)","4",211,{"v":23790.3,"d":"23790.300"},{"v":4.44024,"d":"4.440"},{"v":-0.295261,"d":"-0.295"},"cytosol","mitochondrion,cytosol,plastid,nucleus","cytosol",null,"nucleus","plastid","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G21270.1"]
["Os04t0598600-00","Rice","Protein kinase, catalytic domain domain containing protein. (Os04t0598600-00)","4",483,{"v":54028.7,"d":"54028.700"},{"v":6.10733,"d":"6.107"},{"v":-0.245549,"d":"-0.246"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"plasma membrane","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"plasma membrane",null,null,"AT1G21210.1"]
["Os04t0600000-01","Rice","Similar to Transfactor-like protein. (Os04t0600000-01)","4",98,{"v":10568,"d":"10568.000"},{"v":10.5236,"d":"10.524"},{"v":-0.308163,"d":"-0.308"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,"plastid","cytosol","nucleus",null,null,"AT4G13640.1"]
["Os04t0600300-01","Rice","ALTERNATIVE OXIDASE 1BHomodimeric diiron-carboxylate protein, Cyanide-resistant respiration in mitochondria, Reactive oxygen species (ROS) scavenging (Os04t0600300-01)","4",335,{"v":37252.6,"d":"37252.600"},{"v":8.04046,"d":"8.040"},{"v":-0.210448,"d":"-0.210"},"mitochondrion","mitochondrion,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT3G22370.1"]
["Os04t0608600-01","Rice","Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant domain containing protein. (Os04t0608600-01)","4",199,{"v":23020.4,"d":"23020.400"},{"v":8.47652,"d":"8.477"},{"v":0.018593,"d":"0.019"},"cytosol,peroxisome","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",null,null,"plastid","peroxisome","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G31240.1"]
["Os04t0630800-01","Rice","Similar to Anthocyanidin reductase. (Os04t0630800-01)","4",344,{"v":37541.8,"d":"37541.800"},{"v":4.83406,"d":"4.834"},{"v":-0.0729651,"d":"-0.073"},"cytosol","mitochondrion,cytosol,plastid,golgi","cytosol",null,"cytosol","mitochondrion","cytosol","golgi",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G61720.1"]
["Os04t0639200-01","Rice","Similar to OSIGBa0138H21-OSIGBa0138E01.1 protein. (Os04t0639200-01)","4",194,{"v":20348.2,"d":"20348.200"},{"v":4.59453,"d":"4.595"},{"v":0.15567,"d":"0.156"},"plastid","mitochondrion,plasma membrane,cytosol,golgi,peroxisome,plastid","plastid",null,"plastid","mitochondrion","plastid","mitochondrion,plasma membrane,cytosol,golgi,peroxisome,plastid","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT2G21970.1"]
["Os04t0643100-01","Rice","Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-01);Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-02)","4",269,{"v":29182.5,"d":"29182.500"},{"v":10.5002,"d":"10.500"},{"v":-0.136803,"d":"-0.137"},"mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"mitochondrion","mitochondrion","mitochondrion","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G58730.1"]
["Os04t0643100-02","Rice","Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-01);Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-02)","4",269,{"v":29182.5,"d":"29182.500"},{"v":10.5002,"d":"10.500"},{"v":-0.136803,"d":"-0.137"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"mitochondrion","mitochondrion","mitochondrion","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:18557835,msms:vacuole:18557835,msms:plastid:21433289,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G58730.1"]
["Os04t0648200-01","Rice","Leucine-rich repeat, plant specific containing protein. (Os04t0648200-01)","4",443,{"v":48565.7,"d":"48565.700"},{"v":5.92659,"d":"5.927"},{"v":0.0189616,"d":"0.019"},"cytosol,plasma membrane","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","extracellular",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT1G74170.1"]
["Os04t0650800-01","Rice","Similar to Phosphoglycerate dehydrogenase. (Os04t0650800-01);Similar to H0212B02.14 protein. (Os04t0650800-02)","4",613,{"v":63968.7,"d":"63968.700"},{"v":7.33498,"d":"7.335"},{"v":0.182871,"d":"0.183"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"cytosol","plastid","plastid","plastid","plastid","plastid",null,"plastid","mitochondrion","plastid","msms:plastid:17189339,msms:plasma membrane:18260611,msms:plastid:21433289,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT4G34200.1"]
["Os04t0650800-02","Rice","Similar to Phosphoglycerate dehydrogenase. (Os04t0650800-01);Similar to H0212B02.14 protein. (Os04t0650800-02)","4",314,{"v":33031.1,"d":"33031.100"},{"v":4.73208,"d":"4.732"},{"v":0.240127,"d":"0.240"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G34200.1"]
["Os04t0652400-01","Rice","LOW PHYTIC ACIDOrtholog of the sulfate transporter family group 3 , Grain metabolism (Os04t0652400-01);Similar to OSIGBa0113E10.13 protein. (Os04t0652400-02)","4",661,{"v":71456.7,"d":"71456.700"},{"v":9.09185,"d":"9.092"},{"v":0.548563,"d":"0.549"},"plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plastid","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G23090.1"]
["Os04t0652400-02","Rice","LOW PHYTIC ACIDOrtholog of the sulfate transporter family group 3 , Grain metabolism (Os04t0652400-01);Similar to OSIGBa0113E10.13 protein. (Os04t0652400-02)","4",284,{"v":30270.7,"d":"30270.700"},{"v":9.50471,"d":"9.505"},{"v":0.692958,"d":"0.693"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plastid",null,null,"AT1G22150.2"]
["Os04t0665600-01","Rice","Similar to Phosphate starvation response regulator-like protein. (Os04t0665600-01)","4",424,{"v":46310.8,"d":"46310.800"},{"v":7.06994,"d":"7.070"},{"v":-0.503774,"d":"-0.504"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G06800.1"]
["Os04t0668900-01","Rice","OSIMASEProtein similar to plastid terminal oxidase, Carotenoid and strigolactone synthesis (Os04t0668900-01)","4",336,{"v":39007.5,"d":"39007.500"},{"v":5.79881,"d":"5.799"},{"v":-0.263095,"d":"-0.263"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT4G22260.1"]
["Os04t0677300-01","Rice","Harpin-induced 1 domain containing protein. (Os04t0677300-01)","4",255,{"v":27790.8,"d":"27790.800"},{"v":10.6628,"d":"10.663"},{"v":-0.0670588,"d":"-0.067"},"plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid",null,null,"AT1G65690.1"]
["Os04t0683700-01","Rice","Acyl-Activating Enzyme 3, adenosine monophosphate binding protein 34-coumarate-Co-A ligase (4CL) like protein, Adenosine monophosphate binding protein, Regulation of rice blast resistance, floret development, and lignin biosynthesis (Os04t0683700-01)","4",518,{"v":54477.5,"d":"54477.500"},{"v":6.99842,"d":"6.998"},{"v":0.162355,"d":"0.162"},"plasma membrane","mitochondrion,peroxisome,plastid,nucleus","nucleus",null,"peroxisome","mitochondrion","peroxisome","peroxisome","plastid","mitochondrion",null,"mitochondrion","plastid","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G48990.1"]
["Os04t0684800-01","Rice","Similar to CROC-1-like protein (Fragment). (Os04t0684800-01);Non-protein coding transcript. (Os04t0684800-02)","4",151,{"v":16905.2,"d":"16905.200"},{"v":6.0017,"d":"6.002"},{"v":-0.490066,"d":"-0.490"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:nucleus:18022940","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007","AT2G36060.1"]
["Os04t0688000-00","Rice","Similar to CAA303718.1 protein. (Os04t0688000-00)","4",480,{"v":51544,"d":"51544.000"},{"v":10.9475,"d":"10.948"},{"v":-0.37125,"d":"-0.371"},"plastid","peroxisome,plastid,nucleus","nucleus",null,null,"plastid","plastid",null,"plastid","plastid",null,"plastid","plastid","peroxisome",null,null,"AT1G18740.1"]
["Os05t0100600-01","Rice","Similar to aminophospholipid ATPase. (Os05t0100600-01);Similar to Potential phospholipid-transporting ATPase 7 (EC 3.6.3.1) (Aminophospholipid flippase 7). (Os05t0100600-02)","5",497,{"v":55692.9,"d":"55692.900"},{"v":8.83053,"d":"8.831"},{"v":-0.228571,"d":"-0.229"},"mitochondrion,plasma membrane","mitochondrion,plasma membrane,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane",null,"mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT1G68710.3"]
["Os05t0100600-02","Rice","Similar to aminophospholipid ATPase. (Os05t0100600-01);Similar to Potential phospholipid-transporting ATPase 7 (EC 3.6.3.1) (Aminophospholipid flippase 7). (Os05t0100600-02)","5",501,{"v":56306.2,"d":"56306.200"},{"v":6.40229,"d":"6.402"},{"v":-0.235729,"d":"-0.236"},"plasma membrane,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G68710.1"]
["Os05t0127300-01","Rice","CRINKLY4-RELATED protein 3Serine/threonine protein kinase domain containing protein. (Os05t0127300-01);Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os05t0127300-02)","5",710,{"v":73732.7,"d":"73732.700"},{"v":7.03482,"d":"7.035"},{"v":0.0864789,"d":"0.086"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT3G55950.1"]
["Os05t0127300-02","Rice","CRINKLY4-RELATED protein 3Serine/threonine protein kinase domain containing protein. (Os05t0127300-01);Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os05t0127300-02)","5",614,{"v":64159.6,"d":"64159.600"},{"v":11.67,"d":"11.670"},{"v":-0.274593,"d":"-0.275"},"endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,null,"AT3G55950.1"]
["Os05t0130300-01","Rice","Conserved hypothetical protein. (Os05t0130300-01)","5",78,{"v":8482.67,"d":"8482.670"},{"v":8.51348,"d":"8.513"},{"v":-1.07308,"d":"-1.073"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT2G27240.2"]
["Os05t0130500-01","Rice","Hypothetical protein. (Os05t0130500-01)","5",78,{"v":8128.58,"d":"8128.580"},{"v":12.3784,"d":"12.378"},{"v":-0.448718,"d":"-0.449"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion"]
["Os05t0169100-01","Rice","SG12Similar to 60S ribosomal protein L10 (QM protein homolog). (Os05t0169100-01);Similar to 60S ribosomal protein L10-2. (Os05t0169100-02)","5",219,{"v":24673.3,"d":"24673.300"},{"v":11.0317,"d":"11.032"},{"v":-0.524658,"d":"-0.525"},"plastid,nucleus","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",null,"nucleus",null,"cytosol","endoplasmic reticulum,nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:plastid:21433289,msms:nucleus:26035336,msms:plastid:27992503","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G26910.1"]
["Os05t0169100-02","Rice","SG12Similar to 60S ribosomal protein L10 (QM protein homolog). (Os05t0169100-01);Similar to 60S ribosomal protein L10-2. (Os05t0169100-02)","5",121,{"v":13232.3,"d":"13232.300"},{"v":11.4495,"d":"11.450"},{"v":-0.366116,"d":"-0.366"},"plasma membrane","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",null,"nucleus",null,"mitochondrion","endoplasmic reticulum,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:18557835,msms:nucleus:23777608,msms:golgi:25047511,msms:plasma membrane:27800704","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G26910.2"]
["Os05t0194900-01","Rice","Pyrophosphate-dependent phosphofructo-1-kinase, phosphofructokinase 4Similar to Pyrophosphate-fructose-6-phosphate 1-phosphotransferase-like protein (Pyrophosphate-dependent phosphofructo-1-kinase-like protein). (Os05t0194900-01)","5",288,{"v":31106.3,"d":"31106.300"},{"v":5.63351,"d":"5.634"},{"v":-0.0159722,"d":"-0.016"},"cytosol","mitochondrion,cytosol","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G26270.1"]
["Os05t0196100-01","Rice","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 14Multidrug resistance associated protein 1. (Os05t0196100-01);Similar to multidrug resistance associated protein 1. (Os05t0196100-02)","5",{"v":1486,"d":"1,486"},{"v":162666,"d":"162666.000"},{"v":7.86831,"d":"7.868"},{"v":0.281157,"d":"0.281"},"plasma membrane","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",null,null,"mitochondrion","peroxisome",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","vacuole","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G21250.4"]
["Os05t0196100-02","Rice","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 14Multidrug resistance associated protein 1. (Os05t0196100-01);Similar to multidrug resistance associated protein 1. (Os05t0196100-02)","5",{"v":1465,"d":"1,465"},{"v":160421,"d":"160421.000"},{"v":7.77401,"d":"7.774"},{"v":0.286348,"d":"0.286"},"plasma membrane,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT3G21250.2"]
["Os05t0363600-01","Rice","Similar to Catalytic/ oxidoreductase, acting on NADH or NADPH. (Os05t0363600-01)","5",109,{"v":11679,"d":"11679.000"},{"v":10.0064,"d":"10.006"},{"v":-0.158716,"d":"-0.159"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","plastid","plastid,nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:19010998","19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009","AT3G62810.2"]
["Os05t0382550-01","Rice","Conserved hypothetical protein. (Os05t0382550-01)","5",135,{"v":13840.5,"d":"13840.500"},{"v":12.0274,"d":"12.027"},{"v":-0.0303704,"d":"-0.030"},"plastid","extracellular,plastid,nucleus","nucleus",null,null,"plastid","extracellular","nucleus","plastid","plastid",null,"plastid","plastid","extracellular",null,null,"AT2G43230.2"]
["Os05t0424300-01","Rice","Cytochrome P450 family protein. (Os05t0424300-01)","5",519,{"v":57007.5,"d":"57007.500"},{"v":6.66101,"d":"6.661"},{"v":-0.0842004,"d":"-0.084"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","endoplasmic reticulum",null,null,"AT3G26330.1"]
["Os05t0439000-01","Rice","Similar to RING-H2 finger protein ATL1O (RING-H2 finger protein ATL11). (Os05t0439000-01)","5",220,{"v":22228,"d":"22228.000"},{"v":9.31719,"d":"9.317"},{"v":0.255909,"d":"0.256"},"mitochondrion,plasma membrane,plastid,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","nucleus","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT3G10910.1"]
["Os05t0442700-01","Rice","NAC DOMAIN-CONTAINING PROTEIN 12No apical meristem (NAM) protein domain containing protein. (Os05t0442700-01)","5",274,{"v":30460.9,"d":"30460.900"},{"v":5.24769,"d":"5.248"},{"v":-0.916423,"d":"-0.916"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G22380.1"]
["Os05t0450300-01","Rice","Conserved hypothetical protein. (Os05t0450300-01)","5",133,{"v":14843.7,"d":"14843.700"},10.904,{"v":-0.511278,"d":"-0.511"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT3G09050.1"]
["Os05t0463800-01","Rice","HAP3C SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nuclear transcription factor Y subunit B-3. (Os05t0463800-01);CCAAT-box binding transcription factor, Chloroplast biogenesis (Os05t0463800-02)","5",129,{"v":13533,"d":"13533.000"},{"v":8.20327,"d":"8.203"},{"v":-0.575194,"d":"-0.575"},"nucleus","mitochondrion,nucleus,cytoskeleton","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"cytoskeleton","nucleus",null,null,"AT4G14540.1"]
["Os05t0463800-02","Rice","HAP3C SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nuclear transcription factor Y subunit B-3. (Os05t0463800-01);CCAAT-box binding transcription factor, Chloroplast biogenesis (Os05t0463800-02)","5",185,{"v":19181.4,"d":"19181.400"},{"v":6.78796,"d":"6.788"},{"v":-0.676216,"d":"-0.676"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G37060.2"]
["Os05t0467700-01","Rice","Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-01);Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-02)","5",439,{"v":48745,"d":"48745.000"},{"v":5.49379,"d":"5.494"},{"v":-0.336902,"d":"-0.337"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G53360.2"]
["Os05t0467700-02","Rice","Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-01);Protein of unknown function DUF1618 domain containing protein. (Os05t0467700-02)","5",439,{"v":48745,"d":"48745.000"},{"v":5.49379,"d":"5.494"},{"v":-0.336902,"d":"-0.337"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G53360.2"]
["Os05t0468100-01","Rice","Protein of unknown function DUF1618 domain containing protein. (Os05t0468100-01)","5",445,{"v":48118.8,"d":"48118.800"},{"v":5.67102,"d":"5.671"},{"v":-0.0883146,"d":"-0.088"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G35930.4"]
["Os05t0476700-01","Rice","arm repeat protein, plant U-box-containing protein 2, U-box protein 2U-box E3ubiquitin ligase, Positive regulation of cold stress response (Os05t0476700-01)","5",677,{"v":72461.8,"d":"72461.800"},{"v":6.28206,"d":"6.282"},{"v":-0.0205318,"d":"-0.021"},"plastid","mitochondrion,cytosol,plastid","plastid","plastid",null,"mitochondrion","cytosol",null,"plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G01830.1"]
["Os05t0486200-01","Rice","Protein of unknown function KRTCAP2 domain containing protein. (Os05t0486200-01)","5",122,{"v":13122.3,"d":"13122.300"},{"v":9.25213,"d":"9.252"},{"v":0.740164,"d":"0.740"},"plasma membrane,endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular",null,null,"AT1G77350.2"]
["Os05t0490000-01","Rice","KRR1 interacting protein 1 domain containing protein. (Os05t0490000-01)","5",589,{"v":67388.5,"d":"67388.500"},{"v":4.55048,"d":"4.550"},{"v":-1.29728,"d":"-1.297"},"extracellular","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT3G24080.4"]
["Os05t0496400-00","Rice","Metacaspase 4Peptidase C14, caspase catalytic domain containing protein. (Os05t0496400-00)","5",305,{"v":33221.3,"d":"33221.300"},{"v":8.29839,"d":"8.298"},{"v":-0.636066,"d":"-0.636"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G79340.1"]
["Os05t0520600-01","Rice","Conserved hypothetical protein. (Os05t0520600-01)","5",313,{"v":34378.3,"d":"34378.300"},{"v":8.25565,"d":"8.256"},{"v":-0.632268,"d":"-0.632"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G29110.1"]
["Os05t0527000-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os05t0527000-01)","5",472,{"v":52179.5,"d":"52179.500"},{"v":6.0844,"d":"6.084"},{"v":-0.034322,"d":"-0.034"},"mitochondrion,plastid,golgi","mitochondrion,cytosol,golgi,plasma membrane,plastid","cytosol",null,null,"mitochondrion","mitochondrion","plasma membrane,plastid",null,"mitochondrion",null,null,"plastid","golgi",null,null,"AT3G16520.3"]
["Os05t0530400-01","Rice","RICE SQUAMOSA PROMOTER-BINDING-LIKE 7Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10). (Os05t0530400-01)","5",459,{"v":51166.7,"d":"51166.700"},{"v":4.94829,"d":"4.948"},{"v":-0.644662,"d":"-0.645"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G18880.1"]
["Os05t0534800-01","Rice","Hypothetical conserved gene. (Os05t0534800-01)","5",83,{"v":9855.88,"d":"9855.880"},{"v":6.95419,"d":"6.954"},{"v":-0.390361,"d":"-0.390"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G08680.3"]
["Os05t0548900-01","Rice","Phosphoethanolamine N-Methyltransferase 2Similar to Phosphoethanolamine methyltransferase. (Os05t0548900-01)","5",495,{"v":56454,"d":"56454.000"},{"v":6.1741,"d":"6.174"},{"v":-0.463838,"d":"-0.464"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G18000.1"]
["Os05t0555600-01","Rice","NADH-DEPENDENT GLUTAMATE SYNTHASE 2Similar to Glutamate synthase [NADH], amyloplastic. (Os05t0555600-01);Similar to NADH-glutamate synthase 2. (Os05t0555600-02)","5",643,{"v":71311.1,"d":"71311.100"},{"v":5.75752,"d":"5.758"},{"v":-0.381649,"d":"-0.382"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G53460.1"]
["Os05t0555600-02","Rice","NADH-DEPENDENT GLUTAMATE SYNTHASE 2Similar to Glutamate synthase [NADH], amyloplastic. (Os05t0555600-01);Similar to NADH-glutamate synthase 2. (Os05t0555600-02)","5",507,{"v":55566.3,"d":"55566.300"},5.307,{"v":-0.313018,"d":"-0.313"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G53460.1"]
["Os05t0557400-01","Rice","Membrane attack complex component/perforin/complement C9 family protein. (Os05t0557400-01)","5",628,{"v":67558.8,"d":"67558.800"},{"v":9.26539,"d":"9.265"},{"v":-0.0457006,"d":"-0.046"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G28380.1"]
["Os05t0580900-02","Rice","Conserved hypothetical protein. (Os05t0580900-02)","5",118,{"v":12926.5,"d":"12926.500"},{"v":10.3896,"d":"10.390"},{"v":-0.14322,"d":"-0.143"},"mitochondrion","mitochondrion,peroxisome,plasma membrane,plastid","plastid",null,null,"mitochondrion","peroxisome","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT1G66950.1"]
["Os06t0107750-00","Rice","Hypothetical protein. (Os06t0107750-00)","6",81,{"v":8284.76,"d":"8284.760"},{"v":8.96652,"d":"8.967"},{"v":-0.519753,"d":"-0.520"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","extracellular","extracellular","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion"]
["Os06t0115300-01","Rice","Acyl-CoA-binding protein 2Acyl-CoA-binding protein , Stress response (Os06t0115300-01)","6",91,{"v":10249.1,"d":"10249.100"},{"v":4.6939,"d":"4.694"},{"v":-0.610989,"d":"-0.611"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,"cytosol",null,"cytosol","peroxisome,nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol","msms:extracellular:24083427,gfp:cytosol:24738983","24738983:Wei:W:Meng,An-Shan:AS:Hsiao,Caiji:C:Gao,Liwen:L:Jiang,Mee-Len:ML:Chye:2014,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G31812.1"]
["Os06t0125500-01","Rice","glutathione transporter 1, Oligopeptide transporter 3Similar to Oligopeptide transporter 9. (Os06t0125500-01);Similar to Oligopeptide transporter 9. (Os06t0125500-02);Glutathione transporter, Transport of glutathione derivatives (Os06t0125500-03)","6",238,{"v":26748.2,"d":"26748.200"},{"v":6.23021,"d":"6.230"},{"v":0.116387,"d":"0.116"},"cytosol","mitochondrion,cytosol,plasma membrane,plastid","plastid",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G10770.1"]
["Os06t0125500-02","Rice","glutathione transporter 1, Oligopeptide transporter 3Similar to Oligopeptide transporter 9. (Os06t0125500-01);Similar to Oligopeptide transporter 9. (Os06t0125500-02);Glutathione transporter, Transport of glutathione derivatives (Os06t0125500-03)","6",433,{"v":47697.7,"d":"47697.700"},{"v":8.44543,"d":"8.445"},{"v":0.393764,"d":"0.394"},"plasma membrane","mitochondrion,plasma membrane,nucleus","nucleus",{"$nulls":3},"plasma membrane","plasma membrane",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT1G09930.1"]
["Os06t0125500-03","Rice","glutathione transporter 1, Oligopeptide transporter 3Similar to Oligopeptide transporter 9. (Os06t0125500-01);Similar to Oligopeptide transporter 9. (Os06t0125500-02);Glutathione transporter, Transport of glutathione derivatives (Os06t0125500-03)","6",766,{"v":86140.7,"d":"86140.700"},{"v":6.98818,"d":"6.988"},{"v":0.350261,"d":"0.350"},"plasma membrane","mitochondrion,plasma membrane,nucleus","nucleus",{"$nulls":3},"plasma membrane",null,null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT4G10770.1"]
["Os06t0128400-01","Rice","WD40 repeat-like domain containing protein. (Os06t0128400-01)","6",437,{"v":49374.2,"d":"49374.200"},{"v":7.31029,"d":"7.310"},{"v":-0.337986,"d":"-0.338"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","cytosol","nucleus",null,"plastid",null,null,"plastid","plastid","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT3G56990.1"]
["Os06t0133000-01","Rice","GLUTINOUS ENDOSPERMGranule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21). (Os06t0133000-01);Granule-bound starch synthase 1, Starch biosynthesis (Os06t0133000-02)","6",609,{"v":66479.9,"d":"66479.900"},{"v":8.22398,"d":"8.224"},{"v":-0.189655,"d":"-0.190"},"plastid","extracellular,plastid","plastid",null,"extracellular","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G32900.1"]
["Os06t0133000-02","Rice","GLUTINOUS ENDOSPERMGranule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21). (Os06t0133000-01);Granule-bound starch synthase 1, Starch biosynthesis (Os06t0133000-02)","6",609,{"v":66479.9,"d":"66479.900"},{"v":8.22398,"d":"8.224"},{"v":-0.189655,"d":"-0.190"},"plastid","extracellular,plastid","plastid",null,"extracellular","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:15069638,gfp:plastid:15807780,msms:plastid:27992503","15807780:Yasushi:Y:Kawagoe,Akiko:A:Kubo,Hikaru:H:Satoh,Fumio:F:Takaiwa,Yasunori:Y:Nakamura:2005,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G32900.1"]
["Os06t0160800-01","Rice","Conserved hypothetical protein. (Os06t0160800-01);Hypothetical conserved gene. (Os06t0160800-02)","6",125,{"v":13758.4,"d":"13758.400"},{"v":7.26311,"d":"7.263"},{"v":-0.5576,"d":"-0.558"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G35570.1"]
["Os06t0160800-02","Rice","Conserved hypothetical protein. (Os06t0160800-01);Hypothetical conserved gene. (Os06t0160800-02)","6",132,{"v":14451.3,"d":"14451.300"},{"v":7.26311,"d":"7.263"},{"v":-0.444697,"d":"-0.445"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G35570.1"]
["Os06t0168500-01","Rice","Similar to Syntaxin-like protein (Fragment). (Os06t0168500-01)","6",305,{"v":34650.7,"d":"34650.700"},{"v":6.82794,"d":"6.828"},{"v":-0.508852,"d":"-0.509"},"plasma membrane","mitochondrion,nucleus,cytosol,vacuole,golgi","nucleus",null,"vacuole",null,"cytosol","golgi",null,"mitochondrion",null,null,"golgi","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G08080.1"]
["Os06t0187200-01","Rice","UDP-glucuronic acid 4-epimerase 5Similar to Nucleotide sugar epimerase-like protein (UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6). (Os06t0187200-01)","6",309,{"v":34101.9,"d":"34101.900"},{"v":9.98164,"d":"9.982"},{"v":-0.151133,"d":"-0.151"},"peroxisome,golgi","mitochondrion,nucleus,cytosol,golgi,peroxisome,plastid","nucleus",null,"cytosol",null,"peroxisome","plastid,golgi",null,"mitochondrion","peroxisome",null,null,"golgi",null,null,"AT4G30440.1"]
["Os06t0202300-01","Rice","Conserved hypothetical protein. (Os06t0202300-01)","6",76,{"v":8419.13,"d":"8419.130"},{"v":8.99671,"d":"8.997"},{"v":-0.302632,"d":"-0.303"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT3G09620.1"]
["Os06t0202400-01","Rice","Conserved hypothetical protein. (Os06t0202400-01)","6",190,{"v":19492.2,"d":"19492.200"},{"v":8.19278,"d":"8.193"},{"v":1.09368,"d":"1.094"},"plasma membrane,endoplasmic reticulum,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT5G35930.2"]
["Os06t0218900-00","Rice","Similar to predicted protein. (Os06t0218900-00)","6",276,{"v":30719.9,"d":"30719.900"},{"v":6.04862,"d":"6.049"},{"v":-0.485507,"d":"-0.486"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","extracellular,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT5G65290.1"]
["Os06t0224200-01","Rice","GRX-like protein 12, glutaredoxin-like protein 12Thioredoxin fold domain containing protein. (Os06t0224200-01)","6",711,{"v":80476.4,"d":"80476.400"},{"v":4.57713,"d":"4.577"},{"v":-0.657525,"d":"-0.658"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G08550.2"]
["Os06t0226000-01","Rice","Similar to Transposase (Fragment). (Os06t0226000-01);Conserved hypothetical protein. (Os06t0226000-02)","6",225,{"v":25782.9,"d":"25782.900"},{"v":9.61221,"d":"9.612"},{"v":-0.493778,"d":"-0.494"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G35695.1"]
["Os06t0226000-02","Rice","Similar to Transposase (Fragment). (Os06t0226000-01);Conserved hypothetical protein. (Os06t0226000-02)","6",236,{"v":26623.3,"d":"26623.300"},{"v":9.52082,"d":"9.521"},{"v":-0.90678,"d":"-0.907"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G02210.1"]
["Os06t0228500-01","Rice","amino acid transporter-like 12Amino acid transporter, transmembrane domain containing protein. (Os06t0228500-01)","6",413,{"v":43795.6,"d":"43795.600"},{"v":9.41068,"d":"9.411"},{"v":0.874818,"d":"0.875"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",{"$nulls":3},"endoplasmic reticulum","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT5G15240.1"]
["Os06t0293500-01","Rice","Conserved hypothetical protein. (Os06t0293500-01)","6",856,{"v":91782.6,"d":"91782.600"},7.982,{"v":0.313084,"d":"0.313"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,"peroxisome",null,"peroxisome","plastid,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT4G11000.1"]
["Os06t0474800-01","Rice","Similar to 3Fe-4S ferredoxin. (Os06t0474800-01);Similar to 3Fe-4S ferredoxin. (Os06t0474800-02)","6",236,{"v":26899.5,"d":"26899.500"},{"v":7.53036,"d":"7.530"},{"v":-0.845763,"d":"-0.846"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,cytosol,golgi,plastid","plastid",null,"extracellular",null,"cytosol","golgi",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G23240.1"]
["Os06t0474800-02","Rice","Similar to 3Fe-4S ferredoxin. (Os06t0474800-01);Similar to 3Fe-4S ferredoxin. (Os06t0474800-02)","6",194,{"v":22007,"d":"22007.000"},{"v":8.37897,"d":"8.379"},{"v":-0.73299,"d":"-0.733"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,cytosol,golgi","nucleus",null,"extracellular",null,"cytosol","golgi",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G23240.1"]
["Os06t0513050-01","Rice","Thionin 3, thionin 1Conserved hypothetical protein. (Os06t0513050-01)","6",45,{"v":5013.25,"d":"5013.250"},{"v":12.5164,"d":"12.516"},{"v":0.24,"d":"0.240"},"endoplasmic reticulum,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","endoplasmic reticulum","nucleus",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,null,"AT1G75010.1"]
["Os06t0522300-01","Rice","class III peroxidase 81Haem peroxidase family protein. (Os06t0522300-01)","6",338,{"v":37076.7,"d":"37076.700"},{"v":5.00182,"d":"5.002"},{"v":-0.260355,"d":"-0.260"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT3G50990.1"]
["Os06t0541600-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 206Conserved hypothetical protein. (Os06t0541600-00)","6",159,{"v":18113.8,"d":"18113.800"},{"v":7.76683,"d":"7.767"},{"v":-0.389937,"d":"-0.390"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G17780.4"]
["Os06t0542300-01","Rice","Heavy metal transport/detoxification protein domain containing protein. (Os06t0542300-01)","6",183,{"v":20259.6,"d":"20259.600"},{"v":8.76336,"d":"8.763"},{"v":-0.61694,"d":"-0.617"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G06330.1"]
["Os06t0551800-01","Rice","Bulb-type lectin domain domain containing protein. (Os06t0551800-01)","6",234,{"v":26513.3,"d":"26513.300"},{"v":4.95522,"d":"4.955"},{"v":-0.0290598,"d":"-0.029"},"plasma membrane","mitochondrion,extracellular,nucleus,cytosol,golgi,plasma membrane,plastid","nucleus",null,"golgi",null,"cytosol","extracellular,nucleus","plastid","mitochondrion",null,null,"nucleus","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G78830.1"]
["Os06t0588800-00","Rice","Protein kinase, catalytic domain domain containing protein. (Os06t0588800-00)","6",{"v":1152,"d":"1,152"},{"v":126032,"d":"126032.000"},{"v":6.55673,"d":"6.557"},{"v":0.0618924,"d":"0.062"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","plasma membrane","plasma membrane","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT3G47090.1"]
["Os06t0667000-01","Rice","Serine/threonine protein kinase domain containing protein. (Os06t0667000-01)","6",{"v":1061,"d":"1,061"},{"v":112106,"d":"112106.000"},{"v":5.18042,"d":"5.180"},{"v":0.157304,"d":"0.157"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT3G47090.1"]
["Os06t0682633-01","Rice","Hypothetical conserved gene. (Os06t0682633-01)","6",36,{"v":4179.92,"d":"4179.920"},{"v":4.37037,"d":"4.370"},0.175,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT2G28810.2"]
["Os06t0685200-01","Rice","Os_F0663Hypothetical conserved gene. (Os06t0685200-01)","6",569,{"v":64365.3,"d":"64365.300"},{"v":4.87286,"d":"4.873"},{"v":-0.501406,"d":"-0.501"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G16930.1"]
["Os06t0697200-00","Rice","RNA helicase 35BDEAD-box protein abstrakt. (Os06t0697200-00)","6",619,{"v":68147.7,"d":"68147.700"},{"v":7.0419,"d":"7.042"},{"v":-0.246527,"d":"-0.247"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G51280.1"]
["Os07t0105200-01","Rice","Conserved hypothetical protein. (Os07t0105200-01)","7",416,{"v":46784.4,"d":"46784.400"},{"v":6.5576,"d":"6.558"},{"v":-0.0127404,"d":"-0.013"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion","peroxisome",null,"cytosol","cytosol",null,null,"AT4G00160.1"]
["Os07t0112700-01","Rice","EARLY NODULIN LIKE PROTEIN 19Cupredoxin domain containing protein. (Os07t0112700-01)","7",178,{"v":19211.6,"d":"19211.600"},{"v":8.79253,"d":"8.793"},{"v":-0.135955,"d":"-0.136"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:plasma membrane:18260611,msms:extracellular:18372294,msms:plasma membrane:19502382,msms:nucleus:19621931,msms:extracellular:24083427,msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT2G27035.1"]
["Os07t0124100-01","Rice","PHYTOSULFOKINE 4Similar to Phytosulfokines 4 precursor. (Os07t0124100-01)","7",83,{"v":8575.01,"d":"8575.010"},{"v":4.67544,"d":"4.675"},{"v":-0.0337349,"d":"-0.034"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT5G65870.1"]
["Os07t0150700-01","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 23Serine/threonine protein kinase, Pollination and drought stress responses, Reguration of potassium uptake by CBL1-CIPK23 complex (Os07t0150700-01)","7",450,{"v":50711.1,"d":"50711.100"},{"v":9.68236,"d":"9.682"},{"v":-0.408222,"d":"-0.408"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT1G30270.1"]
["Os07t0152700-00","Rice","TAU GLUTATHIONE S-TRANSFERASE 45Similar to Glutathione transferase. (Os07t0152700-00)","7",197,{"v":22444.2,"d":"22444.200"},{"v":6.96246,"d":"6.962"},{"v":-0.0482234,"d":"-0.048"},"cytosol","mitochondrion,cytosol,vacuole","cytosol",null,"vacuole",null,"cytosol",null,null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G78340.1"]
["Os07t0158400-00","Rice","Hypothetical conserved gene. (Os07t0158400-00)","7",192,{"v":20261,"d":"20261.000"},{"v":3.96792,"d":"3.968"},{"v":-0.540625,"d":"-0.541"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G14060.1"]
["Os07t0167500-01","Rice","Conserved hypothetical protein. (Os07t0167500-01)","7",259,{"v":27401.7,"d":"27401.700"},{"v":8.8435,"d":"8.844"},{"v":0.447876,"d":"0.448"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT5G23210.4"]
["Os07t0180700-01","Rice","ZINC-INDUCED FACILITATOR-LIKE 3Similar to Major facilitator superfamily antiporter. (Os07t0180700-01)","7",181,{"v":19786.5,"d":"19786.500"},{"v":6.88283,"d":"6.883"},{"v":0.805525,"d":"0.806"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plasma membrane","plasma membrane",null,null,"AT5G13740.2"]
["Os07t0186000-02","Rice","THIOREDOXIN H-TYPEH-type thioredoxin, Regulation of the apoplastic reactive oxygen species, Stress response (Os07t0186000-02)","7",122,{"v":13156.8,"d":"13156.800"},{"v":4.94095,"d":"4.941"},{"v":0.0467213,"d":"0.047"},"extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:18372294,msms:extracellular:19036832,msms:extracellular:19038476,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:plastid:27992503","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19036832:Lei:L:Zhang,Li-Hong:LH:Tian,Jun-Feng:JF:Zhao,Yun:Y:Song,Cui-Jun:CJ:Zhang,Yi:Y:Guo:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT3G51030.1"]
["Os07t0204100-01","Rice","Conserved hypothetical protein. (Os07t0204100-01)","7",229,{"v":24352,"d":"24352.000"},{"v":4.17323,"d":"4.173"},{"v":-0.531004,"d":"-0.531"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,cytosol,nucleus",null,"mitochondrion",null,null,"plastid","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G18130.1"]
["Os07t0209000-01","Rice","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursorDolichyl-diphosphooligosaccharide-protein glycosyltransferase 48 kDa subunit precursor, N-glycosylation, Root development (Os07t0209000-01);Non-protein coding transcript. (Os07t0209000-02)","7",439,{"v":48392.4,"d":"48392.400"},{"v":6.80439,"d":"6.804"},{"v":-0.10205,"d":"-0.102"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G66680.1"]
["Os07t0227600-00","Rice","ETHYLENE RESPONSE FACTOR 57Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0227600-00)","7",282,{"v":30604.3,"d":"30604.300"},{"v":10.8225,"d":"10.823"},{"v":-0.66383,"d":"-0.664"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G27950.1"]
["Os07t0251200-01","Rice","Conserved hypothetical protein. (Os07t0251200-01)","7",18,{"v":2007.57,"d":"2007.570"},{"v":10.2296,"d":"10.230"},{"v":-0.0222222,"d":"-0.022"},"cytosol,plasma membrane,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","mitochondrion,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:vacuole:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008"]
["Os07t0258400-01","Rice","BACTERIOCIDE EFFECT 1OsNramp1 (Integral membrane protein). (Os07t0258400-01);Similar to Metal transporter. (Os07t0258400-02);Integral membrane protein, Metal ion transport (Os07t0258400-03)","7",518,{"v":55817.3,"d":"55817.300"},{"v":7.75848,"d":"7.758"},{"v":0.684363,"d":"0.684"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT1G80830.2"]
["Os07t0258400-02","Rice","BACTERIOCIDE EFFECT 1OsNramp1 (Integral membrane protein). (Os07t0258400-01);Similar to Metal transporter. (Os07t0258400-02);Integral membrane protein, Metal ion transport (Os07t0258400-03)","7",383,{"v":41227.4,"d":"41227.400"},{"v":9.3524,"d":"9.352"},{"v":0.750653,"d":"0.751"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","gfp:plasma membrane:21697258,gfp:plasma membrane:23700971","23700971:Manish:M:Tiwari,Deepika:D:Sharma,Sanjay:S:Dwivedi,Munna:M:Singh,Rudra Deo:RD:Tripathi,Prabodh Kumar:PK:Trivedi:2014,21697258:Ryuichi:R:Takahashi,Yasuhiro:Y:Ishimaru,Takeshi:T:Senoura,Hugo:H:Shimo,Satoru:S:Ishikawa,Tomohito:T:Arao,Hiromi:H:Nakanishi,Naoko K:NK:Nishizawa:2011","AT1G15960.1"]
["Os07t0258400-03","Rice","BACTERIOCIDE EFFECT 1OsNramp1 (Integral membrane protein). (Os07t0258400-01);Similar to Metal transporter. (Os07t0258400-02);Integral membrane protein, Metal ion transport (Os07t0258400-03)","7",518,{"v":55817.3,"d":"55817.300"},{"v":7.75848,"d":"7.758"},{"v":0.684363,"d":"0.684"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT1G80830.2"]
["Os07t0408100-01","Rice","OsWD40-142WD40 repeat-like domain containing protein. (Os07t0408100-01);Similar to predicted protein. (Os07t0408100-02)","7",422,{"v":45853.2,"d":"45853.200"},{"v":6.37281,"d":"6.373"},{"v":-0.133649,"d":"-0.134"},"cytosol,plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,"plastid","extracellular","cytosol",null,null,"AT3G49180.1"]
["Os07t0408100-02","Rice","OsWD40-142WD40 repeat-like domain containing protein. (Os07t0408100-01);Similar to predicted protein. (Os07t0408100-02)","7",280,{"v":30390.1,"d":"30390.100"},{"v":6.11131,"d":"6.111"},{"v":0.0707143,"d":"0.071"},"plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,"plastid","extracellular","plastid",null,null,"AT3G49180.1"]
["Os07t0489200-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os07t0489200-01)","7",482,{"v":51588.5,"d":"51588.500"},{"v":5.26556,"d":"5.266"},{"v":0.0705394,"d":"0.071"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"plastid","peroxisome","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G22360.1"]
["Os07t0507500-01","Rice","Protein of unknown function DUF1723 domain containing protein. (Os07t0507500-01)","7",589,{"v":65108.1,"d":"65108.100"},{"v":5.83725,"d":"5.837"},{"v":-0.408149,"d":"-0.408"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G25010.1"]
["Os07t0513200-01","Rice","Pentatricopeptide repeat domain containing protein. (Os07t0513200-01);Pentatricopeptide repeat domain containing protein. (Os07t0513200-02);Hypothetical conserved gene. (Os07t0513200-03)","7",754,{"v":83719.8,"d":"83719.800"},{"v":7.1436,"d":"7.144"},{"v":-0.0774536,"d":"-0.077"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT1G05670.3"]
["Os07t0513200-02","Rice","Pentatricopeptide repeat domain containing protein. (Os07t0513200-01);Pentatricopeptide repeat domain containing protein. (Os07t0513200-02);Hypothetical conserved gene. (Os07t0513200-03)","7",754,{"v":83719.8,"d":"83719.800"},{"v":7.1436,"d":"7.144"},{"v":-0.0774536,"d":"-0.077"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT1G05670.3"]
["Os07t0513200-03","Rice","Pentatricopeptide repeat domain containing protein. (Os07t0513200-01);Pentatricopeptide repeat domain containing protein. (Os07t0513200-02);Hypothetical conserved gene. (Os07t0513200-03)","7",681,{"v":75117.7,"d":"75117.700"},{"v":7.85952,"d":"7.860"},{"v":-0.0190896,"d":"-0.019"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion,plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G05670.3"]
["Os07t0566200-01","Rice","protein phosphatase 2C64, protein phosphatase 2C 64, protein phosphatase 97Similar to catalytic/ protein phosphatase type 2C. (Os07t0566200-01);Similar to catalytic/ protein phosphatase type 2C. (Os07t0566200-02)","7",427,{"v":46301.5,"d":"46301.500"},{"v":5.55071,"d":"5.551"},{"v":-0.385714,"d":"-0.386"},"plasma membrane","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","mitochondrion,plasma membrane,plastid,nucleus",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G03415.2"]
["Os07t0566200-02","Rice","protein phosphatase 2C64, protein phosphatase 2C 64, protein phosphatase 97Similar to catalytic/ protein phosphatase type 2C. (Os07t0566200-01);Similar to catalytic/ protein phosphatase type 2C. (Os07t0566200-02)","7",427,{"v":46301.5,"d":"46301.500"},{"v":5.55071,"d":"5.551"},{"v":-0.385714,"d":"-0.386"},"cytosol,peroxisome,plastid","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","mitochondrion,plasma membrane,plastid,nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G03415.2"]
["Os07t0570100-01","Rice","Similar to predicted protein. (Os07t0570100-01)","7",992,{"v":113942,"d":"113942.000"},{"v":5.4737,"d":"5.474"},{"v":-0.338609,"d":"-0.339"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G41790.1"]
["Os07t0585900-00","Rice","Hypothetical conserved gene. (Os07t0585900-00)","7",292,{"v":30244.3,"d":"30244.300"},{"v":10.8917,"d":"10.892"},{"v":-0.471918,"d":"-0.472"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","cytosol,plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G59590.1"]
["Os07t0613300-01","Rice","Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)","7",980,{"v":108387,"d":"108387.000"},{"v":5.90021,"d":"5.900"},{"v":0.182041,"d":"0.182"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT1G72560.4"]
["Os07t0613300-02","Rice","Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)","7",980,{"v":108387,"d":"108387.000"},{"v":5.90021,"d":"5.900"},{"v":0.182041,"d":"0.182"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G72560.4"]
["Os07t0613300-03","Rice","Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)","7",277,{"v":31843.9,"d":"31843.900"},{"v":6.77358,"d":"6.774"},{"v":0.114801,"d":"0.115"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT1G72560.4"]
["Os07t0613600-01","Rice","Hypothetical conserved gene. (Os07t0613600-01)","7",74,{"v":7237.06,"d":"7237.060"},{"v":12.1657,"d":"12.166"},{"v":0.439189,"d":"0.439"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","mitochondrion,plastid,nucleus",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","mitochondrion"]
["Os07t0613800-00","Rice","Protein of unknown function DUF1677, plant domain containing protein. (Os07t0613800-00)","7",186,{"v":19499.1,"d":"19499.100"},{"v":5.85064,"d":"5.851"},{"v":-0.224731,"d":"-0.225"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G72510.2"]
["Os07t0619200-01","Rice","EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)","7",103,{"v":11593.8,"d":"11593.800"},{"v":10.4699,"d":"10.470"},{"v":-0.464078,"d":"-0.464"},"mitochondrion,cytosol","mitochondrion,cytosol,plasma membrane,plastid","plastid",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT3G51920.1"]
["Os07t0619200-02","Rice","EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)","7",98,{"v":11507.2,"d":"11507.200"},{"v":10.6702,"d":"10.670"},{"v":-0.418367,"d":"-0.418"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G04890.1"]
["Os07t0619200-04","Rice","EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)","7",91,{"v":10344.2,"d":"10344.200"},{"v":10.1831,"d":"10.183"},{"v":-0.671429,"d":"-0.671"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G37770.1"]
["Os07t0633200-01","Rice","Similar to SC35-like splicing factor SCL30a, 30a kD. (Os07t0633200-01);Similar to SC35-like splicing factor SCL30a, 30a kD. (Os07t0633200-02)","7",213,{"v":24821.9,"d":"24821.900"},{"v":11.0347,"d":"11.035"},{"v":-1.36526,"d":"-1.365"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","plastid,nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT1G55310.2"]
["Os07t0633200-02","Rice","Similar to SC35-like splicing factor SCL30a, 30a kD. (Os07t0633200-01);Similar to SC35-like splicing factor SCL30a, 30a kD. (Os07t0633200-02)","7",213,{"v":24821.9,"d":"24821.900"},{"v":11.0347,"d":"11.035"},{"v":-1.36526,"d":"-1.365"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","plastid,nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT1G55310.2"]
["Os07t0641700-01","Rice","Similar to 10 kDa chaperonin (Protein CPN10) (Protein groES). (Os07t0641700-01);Similar to 10 kDa chaperonin. (Os07t0641700-02)","7",98,{"v":10644.2,"d":"10644.200"},{"v":8.98535,"d":"8.985"},{"v":-0.0928571,"d":"-0.093"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:24083427","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G14980.1"]
["Os07t0641700-02","Rice","Similar to 10 kDa chaperonin (Protein CPN10) (Protein groES). (Os07t0641700-01);Similar to 10 kDa chaperonin. (Os07t0641700-02)","7",49,{"v":5425.58,"d":"5425.580"},{"v":4.28413,"d":"4.284"},{"v":-0.0591837,"d":"-0.059"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G14980.1"]
["Os07t0642900-01","Rice","Bacterial transferase hexapeptide repeat domain containing protein. (Os07t0642900-01)","7",273,{"v":29615.8,"d":"29615.800"},{"v":6.92378,"d":"6.924"},{"v":-0.0468864,"d":"-0.047"},"nucleus","mitochondrion,cytosol,nucleus","mitochondrion",null,"nucleus","mitochondrion","mitochondrion","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:nucleus:18022940","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007","AT1G47260.1"]
["Os07t0659300-01","Rice","Conserved hypothetical protein. (Os07t0659300-01)","7",233,{"v":24851.4,"d":"24851.400"},{"v":10.8774,"d":"10.877"},{"v":-0.125322,"d":"-0.125"},"mitochondrion","mitochondrion,plasma membrane,plastid","plastid",null,null,"mitochondrion","mitochondrion","plasma membrane,plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G12340.1"]
["Os07t0663000-00","Rice","Hypothetical protein. (Os07t0663000-00)","7",158,{"v":16772.9,"d":"16772.900"},{"v":3.87604,"d":"3.876"},{"v":-0.821519,"d":"-0.822"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT3G13225.1"]
["Os07t0670800-01","Rice","Similar to 60S ribosomal protein L19-3. (Os07t0670800-01)","7",53,{"v":6155.5,"d":"6155.500"},{"v":11.2304,"d":"11.230"},{"v":-1.30755,"d":"-1.308"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G02230.1"]
["Os07t0688500-00","Rice","Similar to Poly. (Os07t0688500-00)","7",524,{"v":59322.8,"d":"59322.800"},{"v":8.07541,"d":"8.075"},{"v":-0.125954,"d":"-0.126"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"plastid",null,"plastid","cytosol","nucleus",null,null,"AT3G06560.1"]
["Os08t0102900-00","Rice","VQ motif-containing protein 32VQ domain containing protein. (Os08t0102900-00)","8",207,{"v":22396.6,"d":"22396.600"},{"v":10.1414,"d":"10.141"},{"v":-0.505314,"d":"-0.505"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT3G18690.1"]
["Os08t0108200-01","Rice","FAS2G-protein, beta subunit family protein. (Os08t0108200-01)","8",505,{"v":55322.5,"d":"55322.500"},{"v":6.86138,"d":"6.861"},{"v":-0.249505,"d":"-0.250"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","nucleus",null,null,"AT5G64630.2"]
["Os08t0190100-01","Rice","GERMIN-LIKE PROTEIN 8-11Germin-like protein 8-11, Disease resistance (Os08t0190100-01)","8",224,{"v":24286.2,"d":"24286.200"},{"v":6.79052,"d":"6.791"},{"v":0.108482,"d":"0.108"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular",null,null,"AT3G05950.1"]
["Os08t0202300-01","Rice","Hypothetical conserved gene. (Os08t0202300-01);Conserved hypothetical protein. (Os08t0202300-02);Reverse transcriptase domain containing protein. (Os08t0202300-03);Similar to SHR5-receptor-like kinase (Fragment). (Os08t0202300-04)","8",74,{"v":8060.77,"d":"8060.770"},{"v":8.50082,"d":"8.501"},{"v":-0.356757,"d":"-0.357"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane,plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G56080.1"]
["Os08t0202300-02","Rice","Hypothetical conserved gene. (Os08t0202300-01);Conserved hypothetical protein. (Os08t0202300-02);Reverse transcriptase domain containing protein. (Os08t0202300-03);Similar to SHR5-receptor-like kinase (Fragment). (Os08t0202300-04)","8",109,{"v":11944.4,"d":"11944.400"},{"v":4.28334,"d":"4.283"},{"v":0.385321,"d":"0.385"},"endoplasmic reticulum,extracellular,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane",null,"endoplasmic reticulum","plasma membrane,extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"golgi","extracellular",null,null,"AT1G56120.3"]
["Os08t0202300-03","Rice","Hypothetical conserved gene. (Os08t0202300-01);Conserved hypothetical protein. (Os08t0202300-02);Reverse transcriptase domain containing protein. (Os08t0202300-03);Similar to SHR5-receptor-like kinase (Fragment). (Os08t0202300-04)","8",591,{"v":67098.4,"d":"67098.400"},{"v":9.60355,"d":"9.604"},{"v":-0.120981,"d":"-0.121"},"nucleus","mitochondrion,peroxisome,plastid,nucleus","nucleus",null,null,"mitochondrion","peroxisome","plastid",null,"mitochondrion",{"$nulls":3},"nucleus","msms:nucleus:18203134,msms:extracellular:25047395","18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","ATMG00860.1"]
["Os08t0202300-04","Rice","Hypothetical conserved gene. (Os08t0202300-01);Conserved hypothetical protein. (Os08t0202300-02);Reverse transcriptase domain containing protein. (Os08t0202300-03);Similar to SHR5-receptor-like kinase (Fragment). (Os08t0202300-04)","8",603,{"v":66214.8,"d":"66214.800"},{"v":5.19261,"d":"5.193"},{"v":-0.0330017,"d":"-0.033"},"plasma membrane","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","peroxisome","plasma membrane,extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,null,"AT1G56120.1"]
["Os08t0203350-01","Rice","Conserved hypothetical protein. (Os08t0203350-01)","8",79,{"v":8924.71,"d":"8924.710"},12.625,{"v":-1.03038,"d":"-1.030"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT1G33720.1"]
["Os08t0260600-01","Rice","TETRASPANIN 11Tetraspanin domain containing protein. (Os08t0260600-01)","8",273,{"v":29117.2,"d":"29117.200"},{"v":8.7164,"d":"8.716"},{"v":0.235897,"d":"0.236"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT2G23810.1"]
["Os08t0320500-01","Rice","Hypothetical conserved gene. (Os08t0320500-01)","8",202,{"v":21642.7,"d":"21642.700"},{"v":12.9779,"d":"12.978"},{"v":-0.830693,"d":"-0.831"},"mitochondrion,extracellular,nucleus","mitochondrion,extracellular,plastid,nucleus","plastid",null,"nucleus","mitochondrion","extracellular","plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT5G49470.2"]
["Os08t0355400-01","Rice","Protein of unknown function DUF247, plant family protein. (Os08t0355400-01);Hypothetical conserved gene. (Os08t0355400-02)","8",489,{"v":54685.3,"d":"54685.300"},{"v":6.34701,"d":"6.347"},{"v":-0.275869,"d":"-0.276"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"nucleus",null,"cytosol","plasma membrane,plastid",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT3G50190.1"]
["Os08t0355400-02","Rice","Protein of unknown function DUF247, plant family protein. (Os08t0355400-01);Hypothetical conserved gene. (Os08t0355400-02)","8",556,{"v":62224.4,"d":"62224.400"},{"v":7.64678,"d":"7.647"},{"v":-0.353777,"d":"-0.354"},"plasma membrane","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome,plastid","plastid",null,"nucleus","mitochondrion","cytosol","plasma membrane,plastid",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G50190.1"]
["Os08t0364900-00","Rice","Similar to Pirin-like protein. (Os08t0364900-00)","8",352,{"v":37264.9,"d":"37264.900"},{"v":6.44671,"d":"6.447"},{"v":-0.211932,"d":"-0.212"},"plastid","cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol","plastid","plastid","plastid",null,"plastid","cytosol","plastid",null,null,"AT2G43120.2"]
["Os08t0378000-02","Rice","Conserved hypothetical protein. (Os08t0378000-02);Hypothetical protein. (Os08t0378000-03)","8",370,{"v":40003.4,"d":"40003.400"},{"v":4.9023,"d":"4.902"},{"v":0.0781081,"d":"0.078"},"plasma membrane,endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G21270.1"]
["Os08t0378000-03","Rice","Conserved hypothetical protein. (Os08t0378000-02);Hypothetical protein. (Os08t0378000-03)","8",111,{"v":11252,"d":"11252.000"},{"v":11.7601,"d":"11.760"},{"v":-0.903604,"d":"-0.904"},"cytosol,plastid,nucleus","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus"]
["Os08t0438400-01","Rice","Similar to ZF-HD homeobox protein. (Os08t0438400-01)","8",338,{"v":35250.5,"d":"35250.500"},{"v":8.11537,"d":"8.115"},{"v":-0.491124,"d":"-0.491"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","nucleus","nucleus","plastid","mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G15210.1"]
["Os08t0448100-01","Rice","Conserved hypothetical protein. (Os08t0448100-01)","8",164,{"v":17491.6,"d":"17491.600"},{"v":12.1188,"d":"12.119"},{"v":-0.389634,"d":"-0.390"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"plastid","plastid","plastid",null,null,"AT5G57510.1"]
["Os08t0452900-01","Rice","DnaJ domain protein C62Similar to Chaperone protein dnaJ. (Os08t0452900-01)","8",102,{"v":11372.8,"d":"11372.800"},{"v":11.9473,"d":"11.947"},{"v":-0.488235,"d":"-0.488"},"mitochondrion,cytosol,golgi","mitochondrion,nucleus,cytosol,golgi","nucleus",{"$nulls":3},"golgi","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT3G14200.1"]
["Os08t0480050-00","Rice","Hypothetical protein. (Os08t0480050-00)","8",191,{"v":20370.1,"d":"20370.100"},{"v":10.1296,"d":"10.130"},{"v":-0.290576,"d":"-0.291"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G55970.3"]
["Os08t0494200-01","Rice","Conserved hypothetical protein. (Os08t0494200-01)","8",71,{"v":7881.79,"d":"7881.790"},{"v":9.21464,"d":"9.215"},{"v":0.152113,"d":"0.152"},"extracellular","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G52800.1"]
["Os08t0521000-01","Rice","Protein of unknown function DUF599 family protein. (Os08t0521000-01)","8",250,{"v":27434.1,"d":"27434.100"},{"v":7.96386,"d":"7.964"},0.672,"plasma membrane,endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT4G31330.1"]
["Os08t0529100-01","Rice","Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os08t0529100-01)","8",219,{"v":23818.3,"d":"23818.300"},{"v":6.11374,"d":"6.114"},{"v":-0.102283,"d":"-0.102"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G60820.3"]
["Os08t0535800-01","Rice","NAC domain-containing protein 005, NAC domain-containing protein 5, NAC domain-containing protein 35, NAC domain-containing protein 46, NAC domain-containing protein 52No apical meristem (NAM) protein domain containing protein. (Os08t0535800-01);No apical meristem (NAM) protein domain containing protein. (Os08t0535800-02)","8",232,{"v":24692.5,"d":"24692.500"},{"v":10.2589,"d":"10.259"},{"v":-0.281034,"d":"-0.281"},"plastid","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT5G13180.1"]
["Os08t0535800-02","Rice","NAC domain-containing protein 005, NAC domain-containing protein 5, NAC domain-containing protein 35, NAC domain-containing protein 46, NAC domain-containing protein 52No apical meristem (NAM) protein domain containing protein. (Os08t0535800-01);No apical meristem (NAM) protein domain containing protein. (Os08t0535800-02)","8",232,{"v":24692.5,"d":"24692.500"},{"v":10.2589,"d":"10.259"},{"v":-0.281034,"d":"-0.281"},"plastid","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT5G13180.1"]
["Os08t0559400-01","Rice","CYCLOPHILIN 18-2Similar to Cyclophilin-like protein. (Os08t0559400-01)","8",164,{"v":18084.7,"d":"18084.700"},{"v":8.68661,"d":"8.687"},{"v":-0.389024,"d":"-0.389"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G36130.1"]
["Os09t0133600-01","Rice","PAP2Fibrillin-like protein. (Os09t0133600-01);PAP fibrillin family protein. (Os09t0133600-02)","9",319,{"v":33921.3,"d":"33921.300"},{"v":4.74484,"d":"4.745"},{"v":-0.0410658,"d":"-0.041"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:plastid:27126603","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,27126603:Yangyang:Y:Wang,Kuixian:K:Ji,Shihua:S:Shen,Hui:H:Chen:2016","AT4G04020.1"]
["Os09t0133600-02","Rice","PAP2Fibrillin-like protein. (Os09t0133600-01);PAP fibrillin family protein. (Os09t0133600-02)","9",241,{"v":26490.5,"d":"26490.500"},{"v":4.80928,"d":"4.809"},{"v":-0.158506,"d":"-0.159"},"cytosol,extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:extracellular:28232208","28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT4G22240.1"]
["Os09t0272900-01","Rice","Disease resistance protein domain containing protein. (Os09t0272900-01);Hypothetical conserved gene. (Os09t0272900-02)","9",924,{"v":105923,"d":"105923.000"},{"v":5.97172,"d":"5.972"},{"v":-0.23961,"d":"-0.240"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G12220.1"]
["Os09t0272900-02","Rice","Disease resistance protein domain containing protein. (Os09t0272900-01);Hypothetical conserved gene. (Os09t0272900-02)","9",636,{"v":73326.7,"d":"73326.700"},{"v":5.46491,"d":"5.465"},{"v":-0.197484,"d":"-0.197"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G12220.1"]
["Os09t0287000-01","Rice","SUBMERGENCE 1BSimilar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os09t0287000-01)","9",250,{"v":27025.1,"d":"27025.100"},{"v":4.56862,"d":"4.569"},{"v":-0.7192,"d":"-0.719"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G72360.1"]
["Os09t0343200-01","Rice","Ankyrin repeat containing protein. (Os09t0343200-01)","9",724,{"v":79126.9,"d":"79126.900"},{"v":8.21376,"d":"8.214"},{"v":-1.50432E-16,"d":"-0.000"},"plasma membrane","cytosol,plasma membrane,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid","plasma membrane","cytosol","msms:nucleus:19621931,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G03460.2"]
["Os09t0349650-00","Rice","Similar to OsD305. (Os09t0349650-00)","9",39,{"v":4210.92,"d":"4210.920"},{"v":4.16628,"d":"4.166"},{"v":-0.320513,"d":"-0.321"},"cytosol,endoplasmic reticulum","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol"]
["Os09t0353200-00","Rice","Protein kinase, catalytic domain domain containing protein. (Os09t0353200-00)","9",588,{"v":64384,"d":"64384.000"},{"v":5.12923,"d":"5.129"},{"v":-0.190816,"d":"-0.191"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","cytosol,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G51860.1"]
["Os09t0357400-00","Rice","Disease resistance protein domain containing protein. (Os09t0357400-00)","9",488,{"v":56159.3,"d":"56159.300"},{"v":9.7734,"d":"9.773"},{"v":-0.331967,"d":"-0.332"},"mitochondrion,plastid","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","cytosol","mitochondrion","mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT1G53350.1"]
["Os09t0369500-01","Rice","endosperm-specific gene 127Conserved hypothetical protein. (Os09t0369500-01);Hypothetical conserved gene. (Os09t0369500-02)","9",397,{"v":41083.4,"d":"41083.400"},{"v":11.3041,"d":"11.304"},{"v":-0.198237,"d":"-0.198"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","mitochondrion,plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G03550.1"]
["Os09t0369500-02","Rice","endosperm-specific gene 127Conserved hypothetical protein. (Os09t0369500-01);Hypothetical conserved gene. (Os09t0369500-02)","9",159,{"v":17379.1,"d":"17379.100"},{"v":10.2539,"d":"10.254"},{"v":-0.0949685,"d":"-0.095"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid","plastid",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion","cytosol","mitochondrion",null,null,"AT4G03550.1"]
["Os09t0376900-01","Rice","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 23Similar to Potassium transporter 13 (AtPOT13) (AtKT5). (Os09t0376900-01);Similar to Potassium transporter 23. (Os09t0376900-02)","9",877,{"v":96341.2,"d":"96341.200"},{"v":7.24407,"d":"7.244"},{"v":0.366933,"d":"0.367"},"plasma membrane","mitochondrion,plasma membrane,cytosol,vacuole,peroxisome","cytosol",{"$nulls":3},"cytosol","vacuole",null,"mitochondrion",null,null,"plasma membrane","peroxisome","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G60160.1"]
["Os09t0376900-02","Rice","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 23Similar to Potassium transporter 13 (AtPOT13) (AtKT5). (Os09t0376900-01);Similar to Potassium transporter 23. (Os09t0376900-02)","9",217,{"v":22829.2,"d":"22829.200"},{"v":5.28969,"d":"5.290"},{"v":-0.116129,"d":"-0.116"},"cytosol,endoplasmic reticulum,peroxisome","mitochondrion,nucleus,endoplasmic reticulum,cytosol,vacuole,peroxisome","nucleus",{"$nulls":3},"cytosol","vacuole",null,"mitochondrion",null,null,"endoplasmic reticulum","peroxisome",null,null,"AT1G60160.1"]
["Os09t0400400-01","Rice","CINNAMYL ALCOHOL DEHYDROGENASE 8DCinnamyl alcohol dehydrogenase (EC 1.1.1.195). (Os09t0400400-01)","9",362,{"v":37171.8,"d":"37171.800"},{"v":6.33942,"d":"6.339"},{"v":0.222652,"d":"0.223"},"cytosol","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G37980.1"]
["Os09t0400500-01","Rice","Serine/threonine protein kinase domain containing protein. (Os09t0400500-01)","9",648,{"v":67845.2,"d":"67845.200"},{"v":8.3911,"d":"8.391"},{"v":0.00694444,"d":"0.007"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G48480.1"]
["Os09t0405300-01","Rice","Similar to Uncharacterized protein OsI_031781. (Os09t0405300-01)","9",134,{"v":13968,"d":"13968.000"},{"v":8.46934,"d":"8.469"},{"v":0.289552,"d":"0.290"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G18260.1"]
["Os09t0420800-01","Rice","RUB1Similar to Ubiquitin. (Os09t0420800-01)","9",153,{"v":17130.7,"d":"17130.700"},{"v":5.84861,"d":"5.849"},{"v":-0.447712,"d":"-0.448"},"cytosol,extracellular,plastid","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:26072143,msms:plastid:27992503","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G31340.1"]
["Os09t0431050-00","Rice","Hypothetical gene. (Os09t0431050-00)","9",256,{"v":27410.2,"d":"27410.200"},11.722,{"v":-0.947656,"d":"-0.948"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT2G22600.1"]
["Os09t0442300-01","Rice","Similar to Oryzain gamma chain (Fragment). (Os09t0442300-01)","9",371,{"v":40076.3,"d":"40076.300"},{"v":7.16373,"d":"7.164"},{"v":-0.161186,"d":"-0.161"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","msms:extracellular:19226311,msms:extracellular:24083427,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:extracellular:28232208","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G60360.1"]
["Os09t0444700-01","Rice","Similar to mitochondrial carrier-like protein. (Os09t0444700-01)","9",245,{"v":25470.8,"d":"25470.800"},{"v":8.86062,"d":"8.861"},{"v":0.17102,"d":"0.171"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","mitochondrion","plastid","mitochondrion",null,null,"plastid","plastid",null,null,"AT1G72820.2"]
["Os09t0454600-00","Rice","PHOSPHATE TRANSPORTER 19Similar to Mitochondrial phosphate transporter (Fragment). (Os09t0454600-00)","9",349,{"v":36911.8,"d":"36911.800"},{"v":8.85379,"d":"8.854"},{"v":0.193123,"d":"0.193"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","mitochondrion","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G48850.1"]
["Os09t0464100-01","Rice","Conserved hypothetical protein. (Os09t0464100-01)","9",89,{"v":10074.2,"d":"10074.200"},{"v":12.0115,"d":"12.012"},{"v":-0.919101,"d":"-0.919"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol"]
["Os09t0467200-01","Rice","TAU GLUTATHIONE S-TRANSFERASE 17Similar to Glutathione S-transferase GST 23 (EC 2.5.1.18) (Fragment). (Os09t0467200-01)","9",223,{"v":25187.5,"d":"25187.500"},{"v":5.41508,"d":"5.415"},{"v":-0.0856502,"d":"-0.086"},"plastid","mitochondrion,vacuole,cytosol,plastid","cytosol",null,"vacuole","mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G09270.1"]
["Os09t0468300-00","Rice","Hypothetical conserved gene. (Os09t0468300-00)","9",387,{"v":40485.9,"d":"40485.900"},{"v":10.2026,"d":"10.203"},{"v":-0.206977,"d":"-0.207"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT3G05200.1"]
["Os09t0478100-01","Rice","CELLULOSE SYNTHASE LIKE E1Cellulose synthase family protein. (Os09t0478100-01);Similar to Cellulose synthase-like protein E1. (Os09t0478100-02);Similar to Isoform 2 of Cellulose synthase-like protein E1. (Os09t0478100-03)","9",737,{"v":83501.2,"d":"83501.200"},8.151,{"v":-0.00488467,"d":"-0.005"},"plasma membrane","mitochondrion,plasma membrane,plastid,golgi","plastid",{"$nulls":3},"golgi","plasma membrane,plastid,golgi",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT1G55850.1"]
["Os09t0478100-02","Rice","CELLULOSE SYNTHASE LIKE E1Cellulose synthase family protein. (Os09t0478100-01);Similar to Cellulose synthase-like protein E1. (Os09t0478100-02);Similar to Isoform 2 of Cellulose synthase-like protein E1. (Os09t0478100-03)","9",640,{"v":72531,"d":"72531.000"},{"v":7.08574,"d":"7.086"},{"v":-6.93889e-18,"d":"-0.000"},"cytosol,plasma membrane","mitochondrion,cytosol,golgi,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","plasma membrane,plastid,golgi",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT1G55850.1"]
["Os09t0478100-03","Rice","CELLULOSE SYNTHASE LIKE E1Cellulose synthase family protein. (Os09t0478100-01);Similar to Cellulose synthase-like protein E1. (Os09t0478100-02);Similar to Isoform 2 of Cellulose synthase-like protein E1. (Os09t0478100-03)","9",330,{"v":36978.7,"d":"36978.700"},{"v":8.45196,"d":"8.452"},{"v":0.320909,"d":"0.321"},"cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"peroxisome",null,null,"AT1G55850.1"]
["Os09t0484900-01","Rice","Sodium/sulphate symporter family protein. (Os09t0484900-01)","9",543,{"v":57606.4,"d":"57606.400"},{"v":7.19733,"d":"7.197"},{"v":0.651934,"d":"0.652"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G47560.1"]
["Os09t0489500-01","Rice","b-ZIP TRANSCRIPTION FACTOR 74Similar to Transcription factor HBP-1b(C38) (Fragment). (Os09t0489500-01);Similar to DNA binding protein. (Os09t0489500-02)","9",521,{"v":57665.1,"d":"57665.100"},{"v":7.23804,"d":"7.238"},{"v":-0.572169,"d":"-0.572"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G06839.3"]
["Os09t0489500-02","Rice","b-ZIP TRANSCRIPTION FACTOR 74Similar to Transcription factor HBP-1b(C38) (Fragment). (Os09t0489500-01);Similar to DNA binding protein. (Os09t0489500-02)","9",523,{"v":57857.3,"d":"57857.300"},{"v":7.23804,"d":"7.238"},{"v":-0.578011,"d":"-0.578"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G06839.3"]
["Os09t0491772-01","Rice","58.7 KDA CLASS I HEAT SHOCK PROTEINSimilar to Heat shock protein 70 (Hsc70-5). (Os09t0491772-01)","9",684,{"v":72802.8,"d":"72802.800"},{"v":5.54824,"d":"5.548"},{"v":-0.258041,"d":"-0.258"},"mitochondrion","mitochondrion,peroxisome,plastid","plastid",null,"mitochondrion","mitochondrion","peroxisome","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","plastid","msms:mitochondrion:19010998,msms:plastid:21433289,msms:mitochondrion:23027867,msms:mitochondrion:23356873,msms:plasma membrane:27800704","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,23356873:Shaobai:S:Huang,Richard P:RP:Jacoby,Rachel N:RN:Shingaki-Wells,Lei:L:Li,A Harvey:AH:Millar:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G09590.1"]
["Os09t0511700-01","Rice","BETA-GLUCOSIDASE 32Similar to Prunasin hydrolase isoform PH C precursor (EC 3.2.1.118). (Os09t0511700-01)","9",274,{"v":30213.5,"d":"30213.500"},{"v":5.89555,"d":"5.896"},{"v":-0.221168,"d":"-0.221"},"endoplasmic reticulum,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT1G02850.1"]
["Os09t0515100-01","Rice","Similar to bromodomain protein 103. (Os09t0515100-01);Similar to Cdc48 cell division control protein 48, AAA family. (Os09t0515100-02)","9",913,{"v":102073,"d":"102073.000"},{"v":7.91972,"d":"7.920"},{"v":-0.57667,"d":"-0.577"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus",null,null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G05910.1"]
["Os09t0515100-02","Rice","Similar to bromodomain protein 103. (Os09t0515100-01);Similar to Cdc48 cell division control protein 48, AAA family. (Os09t0515100-02)","9",{"v":1198,"d":"1,198"},{"v":133911,"d":"133911.000"},{"v":6.49539,"d":"6.495"},{"v":-0.603005,"d":"-0.603"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol",null,null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G05910.1"]
["Os09t0520700-01","Rice","RNA helicase 7Similar to RNA helicase. (Os09t0520700-01);Similar to DEAD/DEAH box helicase family protein. (Os09t0520700-02)","9",696,{"v":75030.3,"d":"75030.300"},{"v":9.38345,"d":"9.383"},{"v":-0.379885,"d":"-0.380"},"plastid,nucleus","cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus","plastid","plastid",null,"plastid","nucleus","cytosol",null,null,"AT5G62190.1"]
["Os09t0520700-02","Rice","RNA helicase 7Similar to RNA helicase. (Os09t0520700-01);Similar to DEAD/DEAH box helicase family protein. (Os09t0520700-02)","9",277,{"v":29320.7,"d":"29320.700"},{"v":9.62371,"d":"9.624"},{"v":-0.351264,"d":"-0.351"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G62190.1"]
["Os09t0559600-01","Rice","Thioredoxin domain 2 containing protein. (Os09t0559600-01)","9",102,{"v":11386,"d":"11386.000"},{"v":10.5947,"d":"10.595"},{"v":0.00980392,"d":"0.010"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","cytosol,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular",null,null,"AT5G39950.1"]
["Os10t0130600-00","Rice","Hypothetical conserved gene. (Os10t0130600-00)","10",{"v":1305,"d":"1,305"},{"v":149623,"d":"149623.000"},{"v":6.59434,"d":"6.594"},{"v":-0.256858,"d":"-0.257"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol","plastid","mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G14460.1"]
["Os10t0180800-01","Rice","WALL-ASSOCIATED KINASE GENE 112Wall-associated kinase, Negative regulation of rice blast resistance (Os10t0180800-01);Similar to Calcium binding EGF domain containing protein, expressed. (Os10t0180800-02);Hypothetical conserved gene. (Os10t0180800-03)","10",993,{"v":110911,"d":"110911.000"},{"v":5.99597,"d":"5.996"},{"v":-0.0946626,"d":"-0.095"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","plasma membrane","nucleus","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT1G21230.1"]
["Os10t0180800-02","Rice","WALL-ASSOCIATED KINASE GENE 112Wall-associated kinase, Negative regulation of rice blast resistance (Os10t0180800-01);Similar to Calcium binding EGF domain containing protein, expressed. (Os10t0180800-02);Hypothetical conserved gene. (Os10t0180800-03)","10",499,{"v":56367.2,"d":"56367.200"},{"v":6.99251,"d":"6.993"},{"v":-0.118838,"d":"-0.119"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G21230.1"]
["Os10t0180800-03","Rice","WALL-ASSOCIATED KINASE GENE 112Wall-associated kinase, Negative regulation of rice blast resistance (Os10t0180800-01);Similar to Calcium binding EGF domain containing protein, expressed. (Os10t0180800-02);Hypothetical conserved gene. (Os10t0180800-03)","10",626,{"v":70065.9,"d":"70065.900"},{"v":5.82516,"d":"5.825"},{"v":-0.190096,"d":"-0.190"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G69730.1"]
["Os10t0190900-01","Rice","Multi antimicrobial extrusion protein MatE family protein. (Os10t0190900-01)","10",417,{"v":46364.4,"d":"46364.400"},{"v":11.9791,"d":"11.979"},{"v":-0.473621,"d":"-0.474"},"cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G52450.1"]
["Os10t0202501-01","Rice","Hypothetical gene. (Os10t0202501-01)","10",106,{"v":12101.1,"d":"12101.100"},{"v":9.69034,"d":"9.690"},{"v":0.0330189,"d":"0.033"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","plastid","extracellular","mitochondrion,cytosol,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT2G23420.2"]
["Os10t0209700-01","Rice","Heavy metal transport/detoxification protein domain containing protein. (Os10t0209700-01)","10",265,{"v":30168.1,"d":"30168.100"},{"v":4.74631,"d":"4.746"},{"v":-0.804151,"d":"-0.804"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G50740.5"]
["Os10t0337700-01","Rice","Similar to MFP1 attachment factor 1. (Os10t0337700-01)","10",140,{"v":14549,"d":"14549.000"},{"v":10.2413,"d":"10.241"},{"v":-0.157143,"d":"-0.157"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G47200.1"]
["Os10t0344500-00","Rice","Similar to cDNA clone:001-128-E01, full insert sequence. (Os10t0344500-00)","10",519,{"v":54765.8,"d":"54765.800"},{"v":8.32343,"d":"8.323"},{"v":0.677649,"d":"0.678"},"plasma membrane,vacuole","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"plastid","peroxisome","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","vacuole",null,null,"AT1G15150.1"]
["Os10t0362700-01","Rice","Conserved hypothetical protein. (Os10t0362700-01)","10",132,{"v":13938.3,"d":"13938.300"},{"v":8.83245,"d":"8.832"},{"v":-0.470455,"d":"-0.470"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G16447.1"]
["Os10t0377400-01","Rice","small GTP-binding protein OsRab11E1Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)","10",216,{"v":23813.5,"d":"23813.500"},{"v":8.20901,"d":"8.209"},{"v":-0.243056,"d":"-0.243"},"cytosol","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT5G65270.1"]
["Os10t0377400-02","Rice","small GTP-binding protein OsRab11E1Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)","10",216,{"v":23813.5,"d":"23813.500"},{"v":8.20901,"d":"8.209"},{"v":-0.243056,"d":"-0.243"},"plasma membrane","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","msms:plasma membrane:18260611,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT5G65270.1"]
["Os10t0445900-01","Rice","Conserved hypothetical protein. (Os10t0445900-01)","10",85,{"v":9043.12,"d":"9043.120"},{"v":4.90526,"d":"4.905"},{"v":-1.46118,"d":"-1.461"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT3G56690.1"]
["Os10t0462900-01","Rice","Similar to mitochondrial chaperonin-60. (Os10t0462900-01);Similar to mitochondrial chaperonin-60. (Os10t0462900-02)","10",574,{"v":60853.7,"d":"60853.700"},{"v":5.55215,"d":"5.552"},{"v":-0.0761324,"d":"-0.076"},"mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:mitochondrion:16429260,msms:mitochondrion:19010998,msms:plastid:21433289,msms:mitochondrion:23027867,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:plastid:27992503","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G23990.1"]
["Os10t0462900-02","Rice","Similar to mitochondrial chaperonin-60. (Os10t0462900-01);Similar to mitochondrial chaperonin-60. (Os10t0462900-02)","10",574,{"v":60853.7,"d":"60853.700"},{"v":5.55215,"d":"5.552"},{"v":-0.0761324,"d":"-0.076"},"mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT3G23990.1"]
["Os10t0491000-01","Rice","Plant Basic Secretory Protein family protein. (Os10t0491000-01)","10",229,{"v":24667.7,"d":"24667.700"},{"v":6.10119,"d":"6.101"},{"v":-0.0820961,"d":"-0.082"},"extracellular","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane,peroxisome,extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:18986194,msms:extracellular:19038476,msms:extracellular:19226311,msms:extracellular:19253284,msms:extracellular:24083427,msms:extracellular:25047395,msms:extracellular:28232208","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,19253284:Sun Tae:ST:Kim,Young Hyun:YH:Kang,Yiming:Y:Wang,Jingni:J:Wu,Zee Yong:ZY:Park,Randeep:R:Rakwal,Ganesh Kumar:GK:Agrawal,Sang Yeol:SY:Lee,Kyu Young:KY:Kang:2009,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT2G15220.1"]
["Os10t0513900-01","Rice","Cytochrome P450 family protein. (Os10t0513900-01)","10",520,{"v":58152.8,"d":"58152.800"},{"v":9.0659,"d":"9.066"},{"v":-0.101154,"d":"-0.101"},"golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","golgi","msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT2G12190.1"]
["Os10t0515100-01","Rice","Hypothetical protein. (Os10t0515100-01)","10",172,{"v":19041.1,"d":"19041.100"},{"v":11.6476,"d":"11.648"},{"v":-0.171512,"d":"-0.172"},"mitochondrion","mitochondrion,plasma membrane,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane,nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","plastid",null,null,"AT3G60370.2"]
["Os10t0515200-01","Rice","Cytochrome P450 family protein. (Os10t0515200-01)","10",523,{"v":58161,"d":"58161.000"},{"v":9.46551,"d":"9.466"},{"v":-0.13327,"d":"-0.133"},"plasma membrane,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","endoplasmic reticulum","msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G64940.1"]
["Os10t0527800-01","Rice","TAU GLUTATHIONE S-TRANSFERASE 12Similar to Tau class GST protein 3. (Os10t0527800-01)","10",233,{"v":25091.2,"d":"25091.200"},{"v":4.71483,"d":"4.715"},{"v":-0.0399142,"d":"-0.040"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","cytosol",null,null,"mitochondrion","cytosol","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G10360.1"]
["Os10t0562100-01","Rice","MYBS2Homeodomain-like containing protein. (Os10t0562100-01);Similar to Transcription factor MYBS2. (Os10t0562100-02)","10",265,{"v":29272.7,"d":"29272.700"},{"v":7.06594,"d":"7.066"},{"v":-0.662264,"d":"-0.662"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G47390.1"]
["Os10t0562100-02","Rice","MYBS2Homeodomain-like containing protein. (Os10t0562100-01);Similar to Transcription factor MYBS2. (Os10t0562100-02)","10",124,{"v":13942.6,"d":"13942.600"},{"v":6.1216,"d":"6.122"},{"v":-0.662097,"d":"-0.662"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G70000.1"]
["Os10t0573800-01","Rice","Mitochondrial carnitine/acylcarnitine carrier-like protein (A BOUT DE SOUFFLE) (Carnitine/acylcarnitine translocase-like protein) (CAC-like protein). (Os10t0573800-01)","10",296,{"v":30422.1,"d":"30422.100"},{"v":9.95018,"d":"9.950"},{"v":0.215203,"d":"0.215"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","mitochondrion",null,null,"AT5G46800.1"]
["Os10t0573900-01","Rice","60S ribosomal subunit nuclear export adaptor NMD3NMD3 family protein. (Os10t0573900-01);Similar to Nonsense-mediated mRNA decay protein 3. (Os10t0573900-03)","10",523,{"v":58774.7,"d":"58774.700"},{"v":6.59867,"d":"6.599"},{"v":-0.244742,"d":"-0.245"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","nucleus","mitochondrion,cytosol,plastid,nucleus",null,"mitochondrion",null,null,"plastid","cytosol","msms:nucleus:26035336","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015","AT2G03820.1"]
["Os10t0573900-03","Rice","60S ribosomal subunit nuclear export adaptor NMD3NMD3 family protein. (Os10t0573900-01);Similar to Nonsense-mediated mRNA decay protein 3. (Os10t0573900-03)","10",216,{"v":24849.1,"d":"24849.100"},{"v":4.4285,"d":"4.429"},{"v":-0.70787,"d":"-0.708"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G03820.1"]
["Os10t0580400-01","Rice","high-affinity urea transporter OsDUR3High-affinity urea transporter, Effective urea acquisition and utilisation, Effective use of low external urea as a N source (Os10t0580400-01)","10",721,{"v":76420.5,"d":"76420.500"},{"v":8.77456,"d":"8.775"},{"v":0.599861,"d":"0.600"},"plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:vacuole:18557835,gfp:plasma membrane:22010949","22010949:Wei-Hong:WH:Wang,Barbara:B:Köhler,Feng-Qiu:FQ:Cao,Guo-Wei:GW:Liu,Yuan-Yong:YY:Gong,Song:S:Sheng,Qi-Chao:QC:Song,Xiao-Yuan:XY:Cheng,Trevor:T:Garnett,Mamoru:M:Okamoto,Rui:R:Qin,Bernd:B:Mueller-Roeber,Mark:M:Tester,Lai-Hua:LH:Liu:2012,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT5G45380.1"]
["Os11t0109900-01","Rice","DRB7Double-stranded RNA-binding-like domain containing protein. (Os11t0109900-01)","11",473,{"v":51205.4,"d":"51205.400"},{"v":4.73344,"d":"4.733"},{"v":-0.586047,"d":"-0.586"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G09700.1"]
["Os11t0116550-01","Rice","Similar to predicted protein. (Os11t0116550-01)","11",626,{"v":69596.6,"d":"69596.600"},{"v":6.65393,"d":"6.654"},{"v":-0.427796,"d":"-0.428"},"plasma membrane,extracellular,vacuole","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT3G52850.1"]
["Os11t0118400-01","Rice","Hypothetical protein. (Os11t0118400-01)","11",141,{"v":14279.6,"d":"14279.600"},12.625,{"v":-0.691489,"d":"-0.691"},"plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus","plastid","plastid",null,"plastid","nucleus","nucleus"]
["Os11t0128600-00","Rice","Conserved hypothetical protein. (Os11t0128600-00)","11",152,{"v":15768.7,"d":"15768.700"},{"v":4.44432,"d":"4.444"},{"v":0.119737,"d":"0.120"},"plastid","mitochondrion,plasma membrane,nucleus,cytosol,golgi,peroxisome,plastid","nucleus",null,null,"mitochondrion","cytosol","nucleus,cytosol,peroxisome,golgi,plasma membrane,plastid",null,"mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT3G06670.1"]
["Os11t0153500-01","Rice","Protein of unknown function DUF3049 domain containing protein. (Os11t0153500-01)","11",291,{"v":30259.4,"d":"30259.400"},{"v":4.68912,"d":"4.689"},{"v":-0.332302,"d":"-0.332"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G22390.1"]
["Os11t0155600-01","Rice","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 16Conserved hypothetical protein. (Os11t0155600-01)","11",300,{"v":33539.2,"d":"33539.200"},{"v":7.08034,"d":"7.080"},0.431,"plasma membrane,plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol","plastid","plasma membrane","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT3G59140.1"]
["Os11t0181100-01","Rice","Similar to Transmembrane protein TM9SF3 (Fragment). (Os11t0181100-01)","11",593,{"v":67689.8,"d":"67689.800"},{"v":8.5176,"d":"8.518"},{"v":0.333727,"d":"0.334"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G10950.1"]
["Os11t0182500-01","Rice","Ankyrin Repeat-Containing Protein OsPIANK1Ankyrin repeat-containing protein, Regulator in basal defense (Os11t0182500-01);Hypothetical conserved gene. (Os11t0182500-02)","11",191,{"v":20512.6,"d":"20512.600"},{"v":7.14145,"d":"7.141"},{"v":-0.22356,"d":"-0.224"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G54070.1"]
["Os11t0182500-02","Rice","Ankyrin Repeat-Containing Protein OsPIANK1Ankyrin repeat-containing protein, Regulator in basal defense (Os11t0182500-01);Hypothetical conserved gene. (Os11t0182500-02)","11",127,{"v":13755.2,"d":"13755.200"},{"v":4.74171,"d":"4.742"},{"v":-0.629921,"d":"-0.630"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G01200.1"]
["Os11t0210500-01","Rice","ALCOHOL DEHYDROGENASE 2Similar to Alcohol dehydrogenase. (Os11t0210500-01);Similar to Alcohol dehydrogenase. (Os11t0210500-02)","11",379,{"v":41209.1,"d":"41209.100"},{"v":6.43089,"d":"6.431"},{"v":0.0187335,"d":"0.019"},"cytosol,plastid","mitochondrion,cytosol","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G77120.1"]
["Os11t0210500-02","Rice","ALCOHOL DEHYDROGENASE 2Similar to Alcohol dehydrogenase. (Os11t0210500-01);Similar to Alcohol dehydrogenase. (Os11t0210500-02)","11",208,{"v":22668.6,"d":"22668.600"},{"v":6.99403,"d":"6.994"},0.025,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G77120.1"]
["Os11t0242200-00","Rice","protein phosphatase 2C74, protein phosphatase 2C 74, protein phosphatase 120Protein phosphatase 2C-like domain containing protein. (Os11t0242200-00)","11",374,{"v":39063,"d":"39063.000"},{"v":7.91272,"d":"7.913"},{"v":0.138503,"d":"0.139"},"golgi","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT1G07160.1"]
["Os11t0274100-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 321Similar to Protein kinase domain containing protein, expressed. (Os11t0274100-00)","11",428,{"v":48874.6,"d":"48874.600"},{"v":6.62118,"d":"6.621"},{"v":-0.430374,"d":"-0.430"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G00960.1"]
["Os11t0278300-00","Rice","Hypothetical conserved gene. (Os11t0278300-00)","11",448,{"v":49671.5,"d":"49671.500"},{"v":6.07025,"d":"6.070"},{"v":0.165179,"d":"0.165"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G50160.1"]
["Os11t0438700-01","Rice","Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-01);Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-02);Hypothetical conserved gene. (Os11t0438700-03)","11",264,{"v":27744.6,"d":"27744.600"},{"v":6.48039,"d":"6.480"},{"v":0.255682,"d":"0.256"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","plastid","plastid",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT1G07440.1"]
["Os11t0438700-02","Rice","Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-01);Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-02);Hypothetical conserved gene. (Os11t0438700-03)","11",264,{"v":27744.6,"d":"27744.600"},{"v":6.48039,"d":"6.480"},{"v":0.255682,"d":"0.256"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","plastid","plastid",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT1G07440.1"]
["Os11t0438700-03","Rice","Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-01);Similar to Tropinone reductase-I (EC 1.1.1.206) (TR-I) (Tropine dehydrogenase). (Os11t0438700-02);Hypothetical conserved gene. (Os11t0438700-03)","11",131,{"v":14584.7,"d":"14584.700"},{"v":8.19829,"d":"8.198"},{"v":0.248855,"d":"0.249"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol",null,"cytosol","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular","extracellular",null,null,"AT2G29350.2"]
["Os11t0470500-00","Rice","Similar to Protein kinase domain containing protein, expressed. (Os11t0470500-00)","11",643,{"v":68204.5,"d":"68204.500"},{"v":7.75914,"d":"7.759"},{"v":0.0339036,"d":"0.034"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G40380.1"]
["Os11t0482200-01","Rice","Pathogenic type III effector avirulence factor Avr cleavage site domain containing protein. (Os11t0482200-01)","11",144,{"v":15661.1,"d":"15661.100"},{"v":11.1153,"d":"11.115"},{"v":-1.15,"d":"-1.150"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G07195.2"]
["Os11t0490900-01","Rice","WRKY GENE 72Similar to WRKY transcription factor 72. (Os11t0490900-01)","11",242,{"v":25858.7,"d":"25858.700"},{"v":9.33476,"d":"9.335"},{"v":-0.778099,"d":"-0.778"},"nucleus","plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus","plastid","plastid",null,"plastid","nucleus","nucleus",null,null,"AT5G13080.1"]
["Os11t0543100-01","Rice","Conserved hypothetical protein. (Os11t0543100-01)","11",199,{"v":19646.1,"d":"19646.100"},{"v":4.46638,"d":"4.466"},{"v":-5.02513E-3,"d":"-0.005"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plastid","cytosol"]
["Os11t0545000-01","Rice","NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)","11",340,{"v":38816.1,"d":"38816.100"},{"v":7.49505,"d":"7.495"},{"v":-0.242059,"d":"-0.242"},"mitochondrion,cytosol,peroxisome,nucleus","mitochondrion,nucleus,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,"mitochondrion","cytosol","nucleus",null,null,"AT5G27120.1"]
["Os11t0545000-02","Rice","NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)","11",99,{"v":11164.6,"d":"11164.600"},{"v":5.46786,"d":"5.468"},{"v":0.748485,"d":"0.748"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT4G03830.1"]
["Os11t0545000-03","Rice","NOP5, N-terminal domain containing protein. (Os11t0545000-01);Conserved hypothetical protein. (Os11t0545000-02);NOP5, N-terminal domain containing protein. (Os11t0545000-03)","11",340,{"v":38816.1,"d":"38816.100"},{"v":7.49505,"d":"7.495"},{"v":-0.242059,"d":"-0.242"},"mitochondrion,cytosol,peroxisome,nucleus","mitochondrion,nucleus,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,"mitochondrion","cytosol","nucleus",null,null,"AT5G27120.1"]
["Os11t0625900-01","Rice","Protein kinase, core domain containing protein. (Os11t0625900-01)","11",{"v":1006,"d":"1,006"},{"v":109661,"d":"109661.000"},{"v":6.85679,"d":"6.857"},{"v":0.103777,"d":"0.104"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT3G47090.1"]
["Os11t0629500-01","Rice","Similar to Phosphoserine phosphatase, chloroplast precursor (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase). (Os11t0629500-01)","11",296,{"v":31501.9,"d":"31501.900"},{"v":5.00217,"d":"5.002"},{"v":0.0466216,"d":"0.047"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G18640.2"]
["Os11t0631825-01","Rice","Conserved hypothetical protein. (Os11t0631825-01)","11",75,{"v":8949.12,"d":"8949.120"},{"v":11.8973,"d":"11.897"},-0.232,"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G37060.1"]
["Os11t0649700-01","Rice","Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os11t0649700-01)","11",184,{"v":18834.7,"d":"18834.700"},{"v":4.37981,"d":"4.380"},{"v":0.611413,"d":"0.611"},"plasma membrane,endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"endoplasmic reticulum","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT4G15630.1"]
["Os11t0657900-00","Rice","Similar to NB-ARC domain containing protein. (Os11t0657900-00)","11",{"v":1030,"d":"1,030"},{"v":117956,"d":"117956.000"},{"v":5.93436,"d":"5.934"},{"v":-0.0786408,"d":"-0.079"},"cytosol","cytosol,plasma membrane,plastid","plastid",null,null,"plastid","cytosol","cytosol",null,"plastid",null,"plastid","cytosol","plasma membrane",null,null,"AT5G48620.1"]
["Os11t0668300-00","Rice","Hypothetical conserved gene. (Os11t0668300-00)","11",607,{"v":67635.2,"d":"67635.200"},{"v":6.8666,"d":"6.867"},{"v":-0.494234,"d":"-0.494"},"plastid","mitochondrion,peroxisome,plastid,golgi","plastid",null,null,"plastid","golgi","plastid",null,"mitochondrion",null,"plastid","plastid","peroxisome",null,null,"AT5G57580.1"]
["Os11t0672200-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 351Similar to Protein kinase domain containing protein, expressed. (Os11t0672200-01)","11",115,{"v":12827.8,"d":"12827.800"},{"v":12.2419,"d":"12.242"},{"v":-0.466087,"d":"-0.466"},"mitochondrion","mitochondrion,nucleus","nucleus",null,"nucleus","mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT4G21390.1"]
["Os11t0702900-01","Rice","Hypothetical protein. (Os11t0702900-01)","11",225,{"v":24284.9,"d":"24284.900"},{"v":12.1997,"d":"12.200"},-0.852,"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","nucleus"]
["Os11t0703000-01","Rice","Thaumatin, pathogenesis-related family protein. (Os11t0703000-01)","11",212,{"v":21313.2,"d":"21313.200"},{"v":5.51561,"d":"5.516"},{"v":0.14434,"d":"0.144"},"extracellular","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT2G28790.2"]
["Os11t0704500-01","Rice","METALLOTHIONEIN I-1AMetallothionein-like protein type 1. (Os11t0704500-01)","11",74,{"v":7482.67,"d":"7482.670"},{"v":6.88387,"d":"6.884"},{"v":-0.375676,"d":"-0.376"},"cytosol,plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"cytosol","cytosol,plastid,nucleus",null,"plastid",null,"plastid","plastid","cytosol",null,null,"AT3G09390.2"]
["Os11t0705200-01","Rice","Similar to Scarecrow-like 9 (Fragment). (Os11t0705200-01)","11",692,{"v":77446.4,"d":"77446.400"},{"v":4.78326,"d":"4.783"},{"v":-0.393642,"d":"-0.394"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G07530.1"]
["Os12t0129700-01","Rice","F-box protein 639Cyclin-like F-box domain containing protein. (Os12t0129700-01)","12",373,{"v":42635.6,"d":"42635.600"},{"v":6.89102,"d":"6.891"},{"v":-0.467292,"d":"-0.467"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT2G02360.1"]
["Os12t0134300-00","Rice","Conserved hypothetical protein. (Os12t0134300-00)","12",176,{"v":19265.6,"d":"19265.600"},{"v":5.03688,"d":"5.037"},{"v":-0.567614,"d":"-0.568"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G03280.3"]
["Os12t0153200-01","Rice","Conserved hypothetical protein. (Os12t0153200-01)","12",129,{"v":14090,"d":"14090.000"},{"v":4.29541,"d":"4.295"},{"v":-0.321705,"d":"-0.322"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,"plasma membrane",null,"cytosol","plasma membrane,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G03890.1"]
["Os12t0155000-01","Rice","GERMIN-LIKE PROTEIN 12-4Germin-like protein 12-4, Disease resistance (Os12t0155000-01)","12",195,{"v":21337.5,"d":"21337.500"},{"v":8.4769,"d":"8.477"},{"v":-0.160513,"d":"-0.161"},"cytosol,extracellular,vacuole","mitochondrion,extracellular,nucleus,cytosol,vacuole","nucleus",null,"nucleus",null,"vacuole","extracellular",null,"mitochondrion",null,null,"cytosol","extracellular",null,null,"AT4G14630.1"]
["Os12t0172400-00","Rice","Hypothetical conserved gene. (Os12t0172400-00)","12",288,{"v":33162.3,"d":"33162.300"},{"v":10.6768,"d":"10.677"},{"v":-0.355556,"d":"-0.356"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","plastid","plastid",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT2G35900.1"]
["Os12t0175700-01","Rice","Nonaspanin (TM9SF) family protein. (Os12t0175700-01)","12",598,{"v":68076.2,"d":"68076.200"},{"v":8.45871,"d":"8.459"},{"v":0.301839,"d":"0.302"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G10950.1"]
["Os12t0194100-01","Rice","Conserved hypothetical protein. (Os12t0194100-01)","12",342,{"v":38343.9,"d":"38343.900"},{"v":7.12055,"d":"7.121"},{"v":-0.245322,"d":"-0.245"},"mitochondrion,peroxisome,golgi","mitochondrion,cytosol,vacuole,golgi,peroxisome,plastid","plastid",null,"cytosol","mitochondrion","peroxisome","vacuole,cytosol,plastid",null,"mitochondrion",null,"mitochondrion",null,"golgi",null,null,"AT1G14590.1"]
["Os12t0194900-01","Rice","amino acid permease 10B, amino acid permease 4, amino acid/auxin permease 4Similar to Amino acid carrier (Fragment). (Os12t0194900-01)","12",468,{"v":50894.1,"d":"50894.100"},{"v":8.27219,"d":"8.272"},{"v":0.576068,"d":"0.576"},"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT1G10010.1"]
["Os12t0198200-00","Rice","protein phosphatase 2C77, protein phosphatase 2C 77, protein phosphatase 129Similar to Protein phosphatase 2C. (Os12t0198200-00)","12",177,{"v":18076.3,"d":"18076.300"},{"v":4.64197,"d":"4.642"},{"v":0.0926554,"d":"0.093"},"mitochondrion,peroxisome","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"peroxisome","nucleus",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT1G07160.1"]
["Os12t0233800-01","Rice","BASIC/LEUCINE ZIPPER FACTOR 1ASimilar to DNA-binding factor of bZIP class. (Os12t0233800-01);Similar to DNA-binding factor of bZIP class. (Os12t0233800-02);Similar to DNA-binding factor of bZIP class. (Os12t0233800-03)","12",311,{"v":31872.6,"d":"31872.600"},{"v":6.07401,"d":"6.074"},{"v":-0.628939,"d":"-0.629"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G32150.1"]
["Os12t0233800-02","Rice","BASIC/LEUCINE ZIPPER FACTOR 1ASimilar to DNA-binding factor of bZIP class. (Os12t0233800-01);Similar to DNA-binding factor of bZIP class. (Os12t0233800-02);Similar to DNA-binding factor of bZIP class. (Os12t0233800-03)","12",311,{"v":31872.6,"d":"31872.600"},{"v":6.07401,"d":"6.074"},{"v":-0.628939,"d":"-0.629"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G32150.1"]
["Os12t0233800-03","Rice","BASIC/LEUCINE ZIPPER FACTOR 1ASimilar to DNA-binding factor of bZIP class. (Os12t0233800-01);Similar to DNA-binding factor of bZIP class. (Os12t0233800-02);Similar to DNA-binding factor of bZIP class. (Os12t0233800-03)","12",311,{"v":31872.6,"d":"31872.600"},{"v":6.07401,"d":"6.074"},{"v":-0.628939,"d":"-0.629"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G32150.1"]
["Os12t0248600-01","Rice","Hypothetical protein. (Os12t0248600-01)","12",113,{"v":12049.6,"d":"12049.600"},{"v":10.7936,"d":"10.794"},{"v":-0.2,"d":"-0.200"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G22180.1"]
["Os12t0299300-01","Rice","Conserved hypothetical protein. (Os12t0299300-01);Conserved hypothetical protein. (Os12t0299300-02)","12",50,{"v":5836.27,"d":"5836.270"},{"v":9.75797,"d":"9.758"},-0.008,"mitochondrion,extracellular,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","mitochondrion","golgi","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT4G20990.1"]
["Os12t0299300-02","Rice","Conserved hypothetical protein. (Os12t0299300-01);Conserved hypothetical protein. (Os12t0299300-02)","12",50,{"v":5836.27,"d":"5836.270"},{"v":9.75797,"d":"9.758"},-0.008,"mitochondrion,extracellular,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","mitochondrion","golgi","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT4G20990.1"]
["Os12t0431100-01","Rice","ATPase, AAA-type, core domain containing protein. (Os12t0431100-01)","12",466,{"v":52249.5,"d":"52249.500"},{"v":6.59783,"d":"6.598"},{"v":-0.658798,"d":"-0.659"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT3G28510.1"]
["Os12t0438300-01","Rice","NB-ARC domain containing protein. (Os12t0438300-01)","12",512,{"v":56971.4,"d":"56971.400"},{"v":7.34979,"d":"7.350"},{"v":0.00839844,"d":"0.008"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G14460.1"]
["Os12t0441700-01","Rice","Conserved hypothetical protein. (Os12t0441700-01)","12",80,{"v":8089.62,"d":"8089.620"},{"v":8.22285,"d":"8.223"},{"v":-0.10875,"d":"-0.109"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT4G15025.1"]
["Os12t0456000-00","Rice","Similar to Delta3,5-delta2,4-dienoyl-CoA isomerase. (Os12t0456000-00)","12",236,{"v":25867.5,"d":"25867.500"},{"v":12.2863,"d":"12.286"},{"v":-0.344915,"d":"-0.345"},"cytosol,plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT5G43280.2"]
["Os12t0460100-01","Rice","Protein of unknown function DUF761, plant domain containing protein. (Os12t0460100-01)","12",231,{"v":25505.2,"d":"25505.200"},{"v":4.16433,"d":"4.164"},{"v":-0.115152,"d":"-0.115"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G50610.1"]
["Os12t0514500-01","Rice","Similar to Heat-shock protein precursor. (Os12t0514500-01);Similar to ATP binding. (Os12t0514500-02);Similar to ATP binding. (Os12t0514500-03)","12",811,{"v":91485,"d":"91485.000"},{"v":4.95609,"d":"4.956"},{"v":-0.543033,"d":"-0.543"},"mitochondrion","mitochondrion,endoplasmic reticulum,plastid","plastid",null,"endoplasmic reticulum","mitochondrion","mitochondrion","endoplasmic reticulum","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:plasma membrane:27800704,msms:plastid:27992503","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G07770.2"]
["Os12t0514500-02","Rice","Similar to Heat-shock protein precursor. (Os12t0514500-01);Similar to ATP binding. (Os12t0514500-02);Similar to ATP binding. (Os12t0514500-03)","12",546,{"v":63691.3,"d":"63691.300"},{"v":4.83267,"d":"4.833"},{"v":-0.714286,"d":"-0.714"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",null,"cytosol",null,"cytosol","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G07770.2"]
["Os12t0514500-03","Rice","Similar to Heat-shock protein precursor. (Os12t0514500-01);Similar to ATP binding. (Os12t0514500-02);Similar to ATP binding. (Os12t0514500-03)","12",180,{"v":20159,"d":"20159.000"},{"v":4.73621,"d":"4.736"},{"v":-0.528333,"d":"-0.528"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G04030.1"]
["Os12t0525300-00","Rice","Hypothetical protein. (Os12t0525300-00)","12",106,{"v":11038.8,"d":"11038.800"},{"v":3.94186,"d":"3.942"},{"v":-0.107547,"d":"-0.108"},"mitochondrion","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"extracellular",null,"extracellular","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G27590.2"]
["Os12t0527700-01","Rice","Serine/threonine protein kinase-related domain containing protein. (Os12t0527700-01)","12",824,{"v":91631.3,"d":"91631.300"},{"v":7.00755,"d":"7.008"},{"v":-0.040534,"d":"-0.041"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"plasma membrane",null,"cytosol","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G34300.1"]
["Os12t0579450-00","Rice","Hypothetical gene. (Os12t0579450-00)","12",116,{"v":12529.1,"d":"12529.100"},{"v":12.0354,"d":"12.035"},{"v":-0.702586,"d":"-0.703"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT3G15380.1"]
["Os12t0603800-00","Rice","CALMODULIN-LIKE PROTEIN 5Similar to Calmodulin NtCaM13. (Os12t0603800-00)","12",166,{"v":18480.5,"d":"18480.500"},{"v":3.87689,"d":"3.877"},{"v":-0.46988,"d":"-0.470"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane","nucleus",null,"extracellular",null,"cytosol","cytosol,plasma membrane",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G66410.1"]
["Os12t0609900-00","Rice","F-box protein 676Similar to F-box domain containing protein, expressed. (Os12t0609900-00)","12",420,{"v":45417.1,"d":"45417.100"},{"v":10.7493,"d":"10.749"},{"v":-0.192857,"d":"-0.193"},"plastid","cytosol,peroxisome,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid","plastid","peroxisome",null,null,"AT3G48880.2"]
["Os12t0621300-01","Rice","Hypothetical conserved gene. (Os12t0621300-01);Zinc finger, PMZ-type domain containing protein. (Os12t0621300-02)","12",553,{"v":62735.5,"d":"62735.500"},{"v":5.98365,"d":"5.984"},{"v":-0.493128,"d":"-0.493"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G05850.1"]
["Os12t0621300-02","Rice","Hypothetical conserved gene. (Os12t0621300-01);Zinc finger, PMZ-type domain containing protein. (Os12t0621300-02)","12",260,{"v":29793.1,"d":"29793.100"},{"v":10.2096,"d":"10.210"},{"v":-0.572692,"d":"-0.573"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G06740.1"]
["Os12t0631600-01","Rice","Conserved hypothetical protein. (Os12t0631600-01)","12",419,{"v":45394.2,"d":"45394.200"},{"v":4.12842,"d":"4.128"},{"v":-0.299284,"d":"-0.299"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G79430.1"]
["Os01t0102500-01","Rice","Conserved hypothetical protein. (Os01t0102500-01)","1",332,{"v":36407.2,"d":"36407.200"},{"v":5.37288,"d":"5.373"},{"v":-0.179518,"d":"-0.180"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT5G13100.1"]
["Os01t0102700-01","Rice","Translocon-associated beta family protein. (Os01t0102700-01)","1",205,{"v":22533.5,"d":"22533.500"},{"v":9.1058,"d":"9.106"},{"v":0.116098,"d":"0.116"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT5G14030.3"]
["Os01t0106600-01","Rice","Similar to Chitin-binding lectin 1 precursor (PL-I). (Os01t0106600-01)","1",292,{"v":31133.6,"d":"31133.600"},10.692,{"v":-1.16747,"d":"-1.167"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G75260.1"]
["Os01t0120800-01","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",986,{"v":113902,"d":"113902.000"},{"v":9.91499,"d":"9.915"},{"v":-0.733367,"d":"-0.733"},"plasma membrane,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:golgi:25047511,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT4G11420.1"]
["Os01t0120800-02","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",209,{"v":24342.4,"d":"24342.400"},{"v":7.17935,"d":"7.179"},{"v":-0.321053,"d":"-0.321"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G11420.1"]
["Os01t0120800-03","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",846,{"v":99299.1,"d":"99299.100"},{"v":9.69199,"d":"9.692"},{"v":-0.68156,"d":"-0.682"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G11420.1"]
["Os01t0120800-04","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",674,{"v":77937.6,"d":"77937.600"},{"v":9.48142,"d":"9.481"},{"v":-0.437092,"d":"-0.437"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G11420.1"]
["Os01t0120800-05","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",585,{"v":67327.6,"d":"67327.600"},{"v":9.29439,"d":"9.294"},{"v":-0.325299,"d":"-0.325"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G11420.1"]
["Os01t0120800-06","Rice","EUKARYOTIC INITIATION FACTOR 3ASimilar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a). (Os01t0120800-01);Similar to Translation initiation factor 3. (Os01t0120800-02);Similar to Translation initiation factor 3. (Os01t0120800-03);Similar to Translation initiation factor 3. (Os01t0120800-04);Similar to Translation initiation factor 3. (Os01t0120800-05);Similar to Translation initiation factor 3. (Os01t0120800-06)","1",288,{"v":33003.8,"d":"33003.800"},10.579,{"v":-1.31701,"d":"-1.317"},"nucleus","mitochondrion,nucleus","nucleus",null,"mitochondrion",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT4G23330.1"]
["Os01t0127900-01","Rice","Mannose-6-phosphate isomerase domain containing protein. (Os01t0127900-01)","1",428,{"v":46930.2,"d":"46930.200"},{"v":5.2141,"d":"5.214"},{"v":-0.150701,"d":"-0.151"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"mitochondrion",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G02570.1"]
["Os01t0128400-01","Rice","Protein of unknown function DUF2359, TMEM214 domain containing protein. (Os01t0128400-01);Similar to predicted protein. (Os01t0128400-02)","1",586,{"v":63320.2,"d":"63320.200"},{"v":9.1137,"d":"9.114"},{"v":-0.115188,"d":"-0.115"},"plastid","mitochondrion,nucleus,endoplasmic reticulum,peroxisome,plastid","nucleus",{"$nulls":3},"plastid","nucleus",null,"mitochondrion",null,null,"endoplasmic reticulum","peroxisome","msms:plastid:21433289,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G23170.2"]
["Os01t0128400-02","Rice","Protein of unknown function DUF2359, TMEM214 domain containing protein. (Os01t0128400-01);Similar to predicted protein. (Os01t0128400-02)","1",261,{"v":28205.4,"d":"28205.400"},{"v":9.86587,"d":"9.866"},{"v":0.0275862,"d":"0.028"},"cytosol,peroxisome","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT1G23170.2"]
["Os01t0140500-01","Rice","Similar to 60S ribosomal protein L26B. (Os01t0140500-01)","1",129,{"v":14544.8,"d":"14544.800"},{"v":11.2424,"d":"11.242"},{"v":-0.308527,"d":"-0.309"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G67510.1"]
["Os01t0142800-01","Rice","PROTEIN TRANSPORTER 7Putative peptide transporter, Long-distance translocation of dimethylarsinate to rice grain (Os01t0142800-01);Similar to cDNA clone:J023036E09, full insert sequence (Fragment). (Os01t0142800-02);Similar to Peptide transporter. (Os01t0142800-03)","1",580,{"v":63101.1,"d":"63101.100"},{"v":6.66458,"d":"6.665"},{"v":0.296034,"d":"0.296"},"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","cytosol",null,"vacuole",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT3G54140.2"]
["Os01t0142800-02","Rice","PROTEIN TRANSPORTER 7Putative peptide transporter, Long-distance translocation of dimethylarsinate to rice grain (Os01t0142800-01);Similar to cDNA clone:J023036E09, full insert sequence (Fragment). (Os01t0142800-02);Similar to Peptide transporter. (Os01t0142800-03)","1",587,{"v":64607.8,"d":"64607.800"},{"v":12.4387,"d":"12.439"},{"v":-0.706303,"d":"-0.706"},"peroxisome,nucleus","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",null,"vacuole",null,"peroxisome","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"nucleus",null,null,"AT3G54140.1"]
["Os01t0142800-03","Rice","PROTEIN TRANSPORTER 7Putative peptide transporter, Long-distance translocation of dimethylarsinate to rice grain (Os01t0142800-01);Similar to cDNA clone:J023036E09, full insert sequence (Fragment). (Os01t0142800-02);Similar to Peptide transporter. (Os01t0142800-03)","1",580,{"v":63101.1,"d":"63101.100"},{"v":6.66458,"d":"6.665"},{"v":0.296034,"d":"0.296"},"plasma membrane","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","cytosol",null,"vacuole",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome","msms:plasma membrane:18260611,msms:plasma membrane:19502382,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G54140.2"]
["Os01t0145200-01","Rice","Protein of unknown function DUF3681 domain containing protein. (Os01t0145200-01)","1",141,{"v":14310.5,"d":"14310.500"},{"v":10.4012,"d":"10.401"},{"v":0.411348,"d":"0.411"},"plasma membrane,extracellular,vacuole","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular","plasma membrane,golgi",null,"mitochondrion",null,null,"vacuole","plasma membrane",null,null,"AT4G19910.1"]
["Os01t0148500-01","Rice","Protein of unknown function DUF1677, Oryza sativa family protein. (Os01t0148500-01)","1",399,{"v":44370.2,"d":"44370.200"},{"v":5.9727,"d":"5.973"},{"v":-0.180451,"d":"-0.180"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT2G26160.1"]
["Os01t0172100-01","Rice","PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 3Similar to Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT). (Os01t0172100-01)","1",393,{"v":41737.5,"d":"41737.500"},10.594,{"v":0.587023,"d":"0.587"},"plastid","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","plastid","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT5G33320.1"]
["Os01t0180800-01","Rice","Heat shock protein Hsp70 family protein. (Os01t0180800-01);Similar to heat shock 70 kDa protein 4. (Os01t0180800-02);Similar to heat shock 70 kDa protein 4. (Os01t0180800-03)","1",845,{"v":93112.6,"d":"93112.600"},{"v":4.91474,"d":"4.915"},{"v":-0.450651,"d":"-0.451"},"plasma membrane","mitochondrion,cytosol","cytosol",null,"cytosol",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G79930.1"]
["Os01t0180800-02","Rice","Heat shock protein Hsp70 family protein. (Os01t0180800-01);Similar to heat shock 70 kDa protein 4. (Os01t0180800-02);Similar to heat shock 70 kDa protein 4. (Os01t0180800-03)","1",334,{"v":37013.7,"d":"37013.700"},{"v":7.41614,"d":"7.416"},{"v":-0.108383,"d":"-0.108"},"cytosol","mitochondrion,cytosol,plasma membrane","cytosol",null,"plasma membrane",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G79930.1"]
["Os01t0180800-03","Rice","Heat shock protein Hsp70 family protein. (Os01t0180800-01);Similar to heat shock 70 kDa protein 4. (Os01t0180800-02);Similar to heat shock 70 kDa protein 4. (Os01t0180800-03)","1",273,{"v":30622.9,"d":"30622.900"},{"v":4.49816,"d":"4.498"},{"v":-0.898901,"d":"-0.899"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G79930.1"]
["Os01t0184800-01","Rice","Thioredoxin fold domain containing protein. (Os01t0184800-01)","1",251,{"v":28379.1,"d":"28379.100"},{"v":4.30484,"d":"4.305"},{"v":-0.653785,"d":"-0.654"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT5G14240.1"]
["Os01t0189800-01","Rice","Protein of unknown function DUF1618 domain containing protein. (Os01t0189800-01)","1",498,{"v":55683.1,"d":"55683.100"},{"v":8.52649,"d":"8.526"},{"v":-0.602209,"d":"-0.602"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT4G00090.1"]
["Os01t0215500-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 5Similar to esterase. (Os01t0215500-01)","1",304,{"v":32938.3,"d":"32938.300"},{"v":5.32265,"d":"5.323"},{"v":0.105263,"d":"0.105"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT1G28570.1"]
["Os01t0239100-01","Rice","DnaJ domain protein B1Heat shock protein DnaJ family protein. (Os01t0239100-01);Heat shock protein DnaJ family protein. (Os01t0239100-02)","1",349,{"v":38540.9,"d":"38540.900"},{"v":9.58685,"d":"9.587"},{"v":-0.622923,"d":"-0.623"},"nucleus,cytosol,cytoskeleton","mitochondrion,nucleus,cytosol,cytoskeleton,golgi","nucleus",null,"cytosol",null,"cytosol","mitochondrion,golgi",null,"mitochondrion",null,null,"cytoskeleton","nucleus",null,null,"AT4G28480.1"]
["Os01t0239100-02","Rice","DnaJ domain protein B1Heat shock protein DnaJ family protein. (Os01t0239100-01);Heat shock protein DnaJ family protein. (Os01t0239100-02)","1",349,{"v":38540.9,"d":"38540.900"},{"v":9.58685,"d":"9.587"},{"v":-0.622923,"d":"-0.623"},"nucleus,cytosol,cytoskeleton","mitochondrion,nucleus,cytosol,cytoskeleton,golgi","nucleus",null,"cytosol",null,"cytosol","mitochondrion,golgi",null,"mitochondrion",null,null,"cytoskeleton","nucleus",null,null,"AT4G28480.1"]
["Os01t0253300-01","Rice","IMPORTIN ALPHA 1AImportin alpha-1a subunit. (Os01t0253300-01);Importin alpha-1a subunit. (Os01t0253300-02)","1",526,{"v":57573.9,"d":"57573.900"},{"v":4.85341,"d":"4.853"},{"v":-0.178707,"d":"-0.179"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G16143.1"]
["Os01t0253300-02","Rice","IMPORTIN ALPHA 1AImportin alpha-1a subunit. (Os01t0253300-01);Importin alpha-1a subunit. (Os01t0253300-02)","1",526,{"v":57573.9,"d":"57573.900"},{"v":4.85341,"d":"4.853"},{"v":-0.178707,"d":"-0.179"},"plasma membrane,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"plastid","cytosol","msms:nucleus:23777608,msms:plasma membrane:27800704","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G16143.1"]
["Os01t0254100-01","Rice","TOPLESS-RELATED PROTEIN 1Similar to CTV.2. (Os01t0254100-01);Similar to Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like. (Os01t0254100-02)","1",{"v":1129,"d":"1,129"},{"v":125102,"d":"125102.000"},{"v":7.18252,"d":"7.183"},{"v":-0.347564,"d":"-0.348"},"nucleus","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","cytosol","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G16830.1"]
["Os01t0254100-02","Rice","TOPLESS-RELATED PROTEIN 1Similar to CTV.2. (Os01t0254100-01);Similar to Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like. (Os01t0254100-02)","1",{"v":1029,"d":"1,029"},{"v":114650,"d":"114650.000"},{"v":7.07755,"d":"7.078"},{"v":-0.351604,"d":"-0.352"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","cytosol",null,null,"AT3G16830.1"]
["Os01t0293200-01","Rice","Similar to predicted protein. (Os01t0293200-01)","1",416,{"v":47090,"d":"47090.000"},{"v":9.15427,"d":"9.154"},{"v":-0.31899,"d":"-0.319"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","mitochondrion","plastid","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","mitochondrion",null,null,"AT3G63090.1"]
["Os01t0306900-01","Rice","Protein of unknown function DUF789 family protein. (Os01t0306900-01)","1",357,{"v":39569,"d":"39569.000"},{"v":5.94524,"d":"5.945"},{"v":-0.45098,"d":"-0.451"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G15030.1"]
["Os01t0310800-01","Rice","WALL-ASSOCIATED KINASE GENE 4Similar to Pto kinase interactor 1. (Os01t0310800-01)","1",748,{"v":83719.5,"d":"83719.500"},{"v":7.50543,"d":"7.505"},{"v":-0.236898,"d":"-0.237"},"plasma membrane,plastid","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion","peroxisome",null,"nucleus","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G48210.4"]
["Os01t0337500-00","Rice","Similar to H+-pyrophosphatase (Fragment). (Os01t0337500-00)","1",773,{"v":79761.6,"d":"79761.600"},{"v":6.12636,"d":"6.126"},{"v":0.579819,"d":"0.580"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane","msms:vacuole:18557835,msms:nucleus:19621931,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G15690.1"]
["Os01t0339900-01","Rice","PROTEIN DISULFIDE ISOMERASE-LIKE 2;2, PROTEIN DISULFIDE ISOMERASE-LIKE 2-2, PDI-like protein 2-2Thioredoxin domain 2 containing protein. (Os01t0339900-01)","1",371,{"v":40742.6,"d":"40742.600"},{"v":6.86498,"d":"6.865"},{"v":-0.310243,"d":"-0.310"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:golgi:25047511,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT2G47470.1"]
["Os01t0342750-01","Rice","Hypothetical conserved gene. (Os01t0342750-01)","1",701,{"v":79542.4,"d":"79542.400"},{"v":6.78675,"d":"6.787"},{"v":0.0910128,"d":"0.091"},"plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","cytosol",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G15520.1"]
["Os01t0347200-01","Rice","Conserved hypothetical protein. (Os01t0347200-01)","1",494,{"v":55088.7,"d":"55088.700"},{"v":9.81114,"d":"9.811"},{"v":0.574899,"d":"0.575"},"peroxisome","mitochondrion,peroxisome,plasma membrane,nucleus","nucleus",{"$nulls":3},"peroxisome","plasma membrane,nucleus",null,"mitochondrion",null,null,"plasma membrane","peroxisome",null,null,"AT5G05480.1"]
["Os01t0355500-01","Rice","DnaJ domain protein C5Hypothetical conserved gene. (Os01t0355500-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os01t0355500-02)","1",523,{"v":55829.5,"d":"55829.500"},{"v":4.01787,"d":"4.018"},{"v":-0.623136,"d":"-0.623"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G12780.5"]
["Os01t0355500-02","Rice","DnaJ domain protein C5Hypothetical conserved gene. (Os01t0355500-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os01t0355500-02)","1",948,{"v":104283,"d":"104283.000"},{"v":4.75138,"d":"4.751"},{"v":-0.85538,"d":"-0.855"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G12780.3"]
["Os01t0356400-01","Rice","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 8Similar to multidrug resistance protein ABC transporter family. (Os01t0356400-01)","1",{"v":1527,"d":"1,527"},{"v":167650,"d":"167650.000"},{"v":7.96603,"d":"7.966"},{"v":0.2148,"d":"0.215"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","endoplasmic reticulum","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plasma membrane","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT2G47800.1"]
["Os01t0390400-01","Rice","Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)","1",586,{"v":65641,"d":"65641.000"},{"v":8.91502,"d":"8.915"},{"v":-0.25802,"d":"-0.258"},"plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"plastid","plastid","cytosol,plastid","plastid","mitochondrion",null,"plastid","plastid","peroxisome",null,null,"AT4G27340.1"]
["Os01t0390400-02","Rice","Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)","1",313,{"v":34864.8,"d":"34864.800"},{"v":10.3204,"d":"10.320"},{"v":-0.497444,"d":"-0.497"},"plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","mitochondrion",null,"plastid","plastid","peroxisome",null,null,"AT4G27340.3"]
["Os01t0390400-03","Rice","Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)","1",313,{"v":34864.8,"d":"34864.800"},{"v":10.3204,"d":"10.320"},{"v":-0.497444,"d":"-0.497"},"plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","mitochondrion",null,"plastid","plastid","peroxisome",null,null,"AT4G27340.3"]
["Os01t0511300-01","Rice","19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 9AProteasome component region PCI domain containing protein. (Os01t0511300-01)","1",385,{"v":43640.7,"d":"43640.700"},{"v":5.28363,"d":"5.284"},{"v":-0.0166234,"d":"-0.017"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G19006.1"]
["Os01t0547600-01","Rice","HIGH AFFINITY NITRATE TRANSPORTERHigh-affinity nitrate transporter, Nitrate transport, Auxin signaling (Os01t0547600-01)","1",485,{"v":50202.2,"d":"50202.200"},{"v":8.06767,"d":"8.068"},{"v":0.564742,"d":"0.565"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT5G14570.1"]
["Os01t0565900-01","Rice","Similar to Protein transport protein Sec61 beta subunit. (Os01t0565900-01);Non-protein coding transcript. (Os01t0565900-02)","1",80,{"v":8177.9,"d":"8177.900"},{"v":11.8209,"d":"11.821"},{"v":0.1725,"d":"0.173"},"plastid","mitochondrion,endoplasmic reticulum,plastid","plastid",null,"endoplasmic reticulum","mitochondrion","plastid","endoplasmic reticulum",null,"mitochondrion",null,"plastid","plastid","plastid",null,null,"AT3G60540.2"]
["Os01t0574400-01","Rice","FTSH4Similar to Cell division protein ftsH (EC 3.4.24.-). (Os01t0574400-01);Similar to Cell division protease ftsH homolog 4, mitochondrial. (Os01t0574400-02)","1",709,{"v":76790.3,"d":"76790.300"},{"v":9.78686,"d":"9.787"},{"v":-0.239492,"d":"-0.239"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,"mitochondrion","mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009","AT2G26140.1"]
["Os01t0574400-02","Rice","FTSH4Similar to Cell division protein ftsH (EC 3.4.24.-). (Os01t0574400-01);Similar to Cell division protease ftsH homolog 4, mitochondrial. (Os01t0574400-02)","1",130,{"v":13517.9,"d":"13517.900"},{"v":8.93033,"d":"8.930"},{"v":-0.349231,"d":"-0.349"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G26140.1"]
["Os01t0582600-01","Rice","Phospholipase A2, active site domain containing protein. (Os01t0582600-01)","1",551,{"v":59322.1,"d":"59322.100"},{"v":7.91106,"d":"7.911"},{"v":-0.337024,"d":"-0.337"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G12010.1"]
["Os01t0621900-01","Rice","ILA1 INTERACTING PROTEIN 1Similar to OSIGBa0097P08.1 protein. (Os01t0621900-01);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-02);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-03);Hypothetical conserved gene. (Os01t0621900-04)","1",646,{"v":66752.7,"d":"66752.700"},{"v":8.9504,"d":"8.950"},{"v":-0.423994,"d":"-0.424"},"nucleus","mitochondrion,nucleus,cytosol,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","nucleus,plasma membrane,golgi",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G64140.1"]
["Os01t0621900-02","Rice","ILA1 INTERACTING PROTEIN 1Similar to OSIGBa0097P08.1 protein. (Os01t0621900-01);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-02);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-03);Hypothetical conserved gene. (Os01t0621900-04)","1",646,{"v":66752.7,"d":"66752.700"},{"v":8.9504,"d":"8.950"},{"v":-0.423994,"d":"-0.424"},"nucleus","mitochondrion,nucleus,cytosol,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","nucleus,plasma membrane,golgi",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G64140.1"]
["Os01t0621900-03","Rice","ILA1 INTERACTING PROTEIN 1Similar to OSIGBa0097P08.1 protein. (Os01t0621900-01);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-02);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-03);Hypothetical conserved gene. (Os01t0621900-04)","1",646,{"v":66752.7,"d":"66752.700"},{"v":8.9504,"d":"8.950"},{"v":-0.423994,"d":"-0.424"},"nucleus","mitochondrion,nucleus,cytosol,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","nucleus,plasma membrane,golgi",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G64140.1"]
["Os01t0621900-04","Rice","ILA1 INTERACTING PROTEIN 1Similar to OSIGBa0097P08.1 protein. (Os01t0621900-01);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-02);Similar to OSIGBa0097P08.1 protein. (Os01t0621900-03);Hypothetical conserved gene. (Os01t0621900-04)","1",343,{"v":35285.7,"d":"35285.700"},{"v":9.32298,"d":"9.323"},{"v":-0.542274,"d":"-0.542"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G64140.1"]
["Os01t0626300-01","Rice","Similar to Mitochondrial import receptor subunit TOM7-1 (Translocase of outer membrane 7 kDa subunit 1). (Os01t0626300-01)","1",80,{"v":8702.75,"d":"8702.750"},{"v":11.2841,"d":"11.284"},{"v":-0.23625,"d":"-0.236"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"nucleus","mitochondrion","mitochondrion","mitochondrion",null,null,"cytosol","mitochondrion",null,null,"AT5G41685.1"]
["Os01t0650200-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 21Lipase, GDSL domain containing protein. (Os01t0650200-01);Similar to Esterase. (Os01t0650200-02);Similar to esterase. (Os01t0650200-03)","1",295,{"v":32092.3,"d":"32092.300"},{"v":5.37575,"d":"5.376"},{"v":-0.152881,"d":"-0.153"},"mitochondrion,peroxisome,plastid,golgi","mitochondrion,extracellular,golgi,peroxisome,plastid","plastid",null,null,"mitochondrion","golgi","extracellular",null,"mitochondrion",null,"mitochondrion","plastid","peroxisome",null,null,"AT1G28570.1"]
["Os01t0650200-02","Rice","GDSL ESTERASE/LIPASE PROTEIN 21Lipase, GDSL domain containing protein. (Os01t0650200-01);Similar to Esterase. (Os01t0650200-02);Similar to esterase. (Os01t0650200-03)","1",249,{"v":26934.9,"d":"26934.900"},{"v":4.86758,"d":"4.868"},{"v":-0.0915663,"d":"-0.092"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"nucleus","mitochondrion","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT1G28600.2"]
["Os01t0650200-03","Rice","GDSL ESTERASE/LIPASE PROTEIN 21Lipase, GDSL domain containing protein. (Os01t0650200-01);Similar to Esterase. (Os01t0650200-02);Similar to esterase. (Os01t0650200-03)","1",84,{"v":9460.39,"d":"9460.390"},{"v":7.66963,"d":"7.670"},{"v":-0.022619,"d":"-0.023"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol",null,null,"AT1G28600.2"]
["Os01t0652600-01","Rice","Similar to Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase). (Os01t0652600-01)","1",548,{"v":59685.1,"d":"59685.100"},{"v":5.96445,"d":"5.964"},{"v":-0.104562,"d":"-0.105"},"plastid","cytosol,plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","cytosol","plastid","msms:mitochondrion:16429260,msms:plastid:17189339,msms:plastid:27992503","16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G58610.3"]
["Os01t0653800-01","Rice","Similar to predicted protein. (Os01t0653800-01);WD40 repeat-like domain containing protein. (Os01t0653800-02);Similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; WD40-like. (Os01t0653800-03)","1",753,{"v":81999.2,"d":"81999.200"},{"v":8.3659,"d":"8.366"},{"v":-0.0467463,"d":"-0.047"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT5G24710.1"]
["Os01t0653800-02","Rice","Similar to predicted protein. (Os01t0653800-01);WD40 repeat-like domain containing protein. (Os01t0653800-02);Similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; WD40-like. (Os01t0653800-03)","1",{"v":1377,"d":"1,377"},{"v":147069,"d":"147069.000"},{"v":7.12917,"d":"7.129"},{"v":-0.126216,"d":"-0.126"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G24710.1"]
["Os01t0653800-03","Rice","Similar to predicted protein. (Os01t0653800-01);WD40 repeat-like domain containing protein. (Os01t0653800-02);Similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; WD40-like. (Os01t0653800-03)","1",706,{"v":75101.6,"d":"75101.600"},{"v":6.21505,"d":"6.215"},{"v":-0.144193,"d":"-0.144"},"mitochondrion,cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion","msms:cytosol:19685898,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009","AT5G24710.1"]
["Os01t0654500-01","Rice","Similar to NADP-isocitrate dehydrogenase. (Os01t0654500-01)","1",412,{"v":46045.1,"d":"46045.100"},{"v":6.7905,"d":"6.791"},{"v":-0.217233,"d":"-0.217"},"plasma membrane,extracellular,plastid","mitochondrion,cytosol,vacuole,peroxisome,plastid","cytosol",null,"vacuole",null,"cytosol","mitochondrion,cytosol,peroxisome,plastid",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:extracellular:19038476,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G65930.1"]
["Os01t0665900-00","Rice","Conserved hypothetical protein. (Os01t0665900-00)","1",181,{"v":18736.7,"d":"18736.700"},{"v":10.6002,"d":"10.600"},{"v":-0.059116,"d":"-0.059"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"nucleus",null,"cytosol","peroxisome,plastid",null,"mitochondrion",null,null,"cytosol","plastid",null,null,"AT1G06475.1"]
["Os01t0681200-01","Rice","Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)","1",665,{"v":73579.6,"d":"73579.600"},{"v":6.38991,"d":"6.390"},{"v":-0.192632,"d":"-0.193"},"plasma membrane","mitochondrion,cytosol,peroxisome","cytosol",{"$nulls":3},"peroxisome","peroxisome",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G23850.1"]
["Os01t0681200-02","Rice","Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)","1",665,{"v":73579.6,"d":"73579.600"},{"v":6.38991,"d":"6.390"},{"v":-0.192632,"d":"-0.193"},"peroxisome","mitochondrion,cytosol,peroxisome","cytosol",{"$nulls":3},"peroxisome","peroxisome",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT4G23850.1"]
["Os01t0685400-01","Rice","Homeodomain-like domain containing protein. (Os01t0685400-01)","1",234,{"v":24445.7,"d":"24445.700"},{"v":7.35762,"d":"7.358"},{"v":-0.265385,"d":"-0.265"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT4G37780.1"]
["Os01t0690800-01","Rice","Protein kinase, core domain containing protein. (Os01t0690800-01)","1",658,{"v":73292.5,"d":"73292.500"},{"v":7.67244,"d":"7.672"},{"v":-0.219301,"d":"-0.219"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G67000.1"]
["Os01t0695800-01","Rice","MULTIDRUG RESISTANCE 7Similar to MDR-like ABC transporter. (Os01t0695800-01)","1",262,{"v":28481.9,"d":"28481.900"},{"v":5.20787,"d":"5.208"},{"v":-0.174046,"d":"-0.174"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:18260611,msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G02520.1"]
["Os01t0706600-00","Rice","Conserved hypothetical protein. (Os01t0706600-00)","1",85,{"v":8791.33,"d":"8791.330"},{"v":9.31295,"d":"9.313"},{"v":-0.681176,"d":"-0.681"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT3G21305.1"]
["Os01t0708600-01","Rice","TRAPP I complex, Trs31 domain containing protein. (Os01t0708600-01)","1",194,{"v":21741.3,"d":"21741.300"},{"v":7.57607,"d":"7.576"},{"v":-0.0835052,"d":"-0.084"},"plasma membrane","mitochondrion,nucleus,endoplasmic reticulum,cytosol,plastid","nucleus",null,"endoplasmic reticulum","mitochondrion","cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G58030.1"]
["Os01t0710300-00","Rice","Conserved hypothetical protein. (Os01t0710300-00)","1",124,{"v":13678.4,"d":"13678.400"},{"v":10.2794,"d":"10.279"},{"v":0.781452,"d":"0.781"},"plasma membrane,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","golgi","plasma membrane,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT5G45095.1"]
["Os01t0721300-00","Rice","Similar to cDNA clone:J013002N02, full insert sequence. (Os01t0721300-00)","1",500,{"v":57230,"d":"57230.000"},{"v":8.16898,"d":"8.169"},{"v":-0.1988,"d":"-0.199"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","cytosol,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT3G14470.1"]
["Os01t0724500-01","Rice","PLEIOTROPIC DRUG RESISTANCE 15Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter). (Os01t0724500-01)","1",205,{"v":23554.2,"d":"23554.200"},{"v":9.99873,"d":"9.999"},{"v":0.564878,"d":"0.565"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","endoplasmic reticulum",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G15210.1"]
["Os01t0730200-01","Rice","F-box protein 36F-box domain, cyclin-like domain containing protein. (Os01t0730200-01)","1",359,{"v":39360.8,"d":"39360.800"},{"v":8.6707,"d":"8.671"},{"v":0.0498607,"d":"0.050"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT3G58900.4"]
["Os01t0733600-01","Rice","Flavoprotein pyridine nucleotide cytochrome reductase domain containing protein. (Os01t0733600-01)","1",626,{"v":70256.5,"d":"70256.500"},{"v":6.51248,"d":"6.512"},{"v":-0.335463,"d":"-0.335"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",{"$nulls":3},"cytosol","endoplasmic reticulum",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G02280.3"]
["Os01t0734000-01","Rice","WRKY GENE 23Similar to WRKY DNA binding protein. (Os01t0734000-01)","1",254,{"v":27797.7,"d":"27797.700"},{"v":6.90318,"d":"6.903"},{"v":-0.656299,"d":"-0.656"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G41570.1"]
["Os01t0739700-01","Rice","Glycoside hydrolase, family 17 protein. (Os01t0739700-01)","1",493,{"v":53823.8,"d":"53823.800"},{"v":5.02506,"d":"5.025"},{"v":-0.0450304,"d":"-0.045"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","msms:plasma membrane:18260611,msms:extracellular:19038476,msms:plasma membrane:19502382","19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT5G56590.1"]
["Os01t0749300-01","Rice","HEAT STRESS TRANSCRIPTION FACTOR A4aHeat shock transcription factor, Cadmium tolerance, Heat stress response (Os01t0749300-01);Heat shock transcription factor, Cadmium tolerance, Heat stress response (Os01t0749300-02)","1",440,{"v":49390,"d":"49390.000"},{"v":5.0937,"d":"5.094"},{"v":-0.901364,"d":"-0.901"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G45710.1"]
["Os01t0749300-02","Rice","HEAT STRESS TRANSCRIPTION FACTOR A4aHeat shock transcription factor, Cadmium tolerance, Heat stress response (Os01t0749300-01);Heat shock transcription factor, Cadmium tolerance, Heat stress response (Os01t0749300-02)","1",440,{"v":49390,"d":"49390.000"},{"v":5.0937,"d":"5.094"},{"v":-0.901364,"d":"-0.901"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G45710.1"]
["Os01t0757500-01","Rice","CS domain domain containing protein. (Os01t0757500-01);Similar to Calcyclin-binding protein. (Os01t0757500-02)","1",226,{"v":24874.1,"d":"24874.100"},{"v":9.28196,"d":"9.282"},{"v":-0.375221,"d":"-0.375"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G30070.1"]
["Os01t0757500-02","Rice","CS domain domain containing protein. (Os01t0757500-01);Similar to Calcyclin-binding protein. (Os01t0757500-02)","1",101,{"v":11558.2,"d":"11558.200"},{"v":9.90915,"d":"9.909"},{"v":-0.652475,"d":"-0.652"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G30070.1"]
["Os01t0760400-01","Rice","Toll-Interleukin receptor domain containing protein. (Os01t0760400-01)","1",{"v":1002,"d":"1,002"},{"v":113633,"d":"113633.000"},{"v":9.52998,"d":"9.530"},{"v":-0.350798,"d":"-0.351"},"cytosol","cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","plastid,nucleus",null,"plastid",null,"plastid","cytosol","cytosol",null,null,"AT4G23440.2"]
["Os01t0833700-01","Rice","Clathrin adaptor, mu subunit, C-terminal domain containing protein. (Os01t0833700-01)","1",518,{"v":57273.2,"d":"57273.200"},{"v":5.81087,"d":"5.811"},{"v":-0.34556,"d":"-0.346"},"plasma membrane","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion","peroxisome","mitochondrion","plastid","cytosol","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G05010.1"]
["Os01t0836800-01","Rice","Transmembrane receptor, eukaryota domain containing protein. (Os01t0836800-01);Transmembrane receptor, eukaryota domain containing protein. (Os01t0836800-04)","1",449,{"v":50439.1,"d":"50439.100"},{"v":5.77321,"d":"5.773"},{"v":0.279065,"d":"0.279"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G18520.1"]
["Os01t0836800-04","Rice","Transmembrane receptor, eukaryota domain containing protein. (Os01t0836800-01);Transmembrane receptor, eukaryota domain containing protein. (Os01t0836800-04)","1",449,{"v":50439.1,"d":"50439.100"},{"v":5.77321,"d":"5.773"},{"v":0.279065,"d":"0.279"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G18520.1"]
["Os01t0845100-01","Rice","Protein of unknown function DUF668 family protein. (Os01t0845100-01)","1",300,{"v":33517.7,"d":"33517.700"},{"v":10.3495,"d":"10.350"},{"v":-0.315333,"d":"-0.315"},"mitochondrion,cytosol,plasma membrane,plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane,plastid,nucleus","plastid","mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT3G23160.1"]
["Os01t0846800-01","Rice","Regulator of chromosome condensation, RCC1 domain containing protein. (Os01t0846800-01)","1",185,{"v":19415.8,"d":"19415.800"},{"v":4.82897,"d":"4.829"},{"v":-0.00864865,"d":"-0.009"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G55580.1"]
["Os01t0852900-01","Rice","Pentatricopeptide repeat domain containing protein. (Os01t0852900-01);Hypothetical conserved gene. (Os01t0852900-02)","1",703,{"v":78184,"d":"78184.000"},{"v":7.71028,"d":"7.710"},{"v":-4.12518E-3,"d":"-0.004"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",{"$nulls":3},"cytosol","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT3G09060.2"]
["Os01t0852900-02","Rice","Pentatricopeptide repeat domain containing protein. (Os01t0852900-01);Hypothetical conserved gene. (Os01t0852900-02)","1",671,{"v":74746.8,"d":"74746.800"},{"v":7.93819,"d":"7.938"},{"v":0.0105812,"d":"0.011"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT3G09060.2"]
["Os01t0860800-01","Rice","Glycoside hydrolase, family 17 protein. (Os01t0860800-01);Glycoside hydrolase, family 17 protein. (Os01t0860800-02)","1",398,{"v":42339.7,"d":"42339.700"},{"v":4.79164,"d":"4.792"},{"v":0.129397,"d":"0.129"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","cytosol,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT2G27500.1"]
["Os01t0860800-02","Rice","Glycoside hydrolase, family 17 protein. (Os01t0860800-01);Glycoside hydrolase, family 17 protein. (Os01t0860800-02)","1",398,{"v":42339.7,"d":"42339.700"},{"v":4.79164,"d":"4.792"},{"v":0.129397,"d":"0.129"},"plasma membrane,extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","cytosol,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular",null,null,"AT2G27500.1"]
["Os01t0892800-01","Rice","OsSTA40Similar to Ankyrin-kinase. (Os01t0892800-01);Integrin-linked protein kinase domain containing protein. (Os01t0892800-02)","1",421,{"v":46816.2,"d":"46816.200"},{"v":8.6978,"d":"8.698"},{"v":-0.386223,"d":"-0.386"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT2G31800.1"]
["Os01t0892800-02","Rice","OsSTA40Similar to Ankyrin-kinase. (Os01t0892800-01);Integrin-linked protein kinase domain containing protein. (Os01t0892800-02)","1",477,{"v":53443.3,"d":"53443.300"},{"v":8.90256,"d":"8.903"},{"v":-0.403145,"d":"-0.403"},"plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT2G43850.1"]
["Os01t0910500-01","Rice","Conserved hypothetical protein. (Os01t0910500-01)","1",408,{"v":43468.2,"d":"43468.200"},{"v":6.25724,"d":"6.257"},{"v":-1.17843,"d":"-1.178"},"extracellular","mitochondrion,extracellular,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","extracellular,nucleus",null,"mitochondrion",null,"mitochondrion","peroxisome","nucleus","msms:extracellular:18372294","18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008"]
["Os01t0928100-01","Rice","Similar to expressed protein. (Os01t0928100-01)","1",570,{"v":62182.8,"d":"62182.800"},{"v":5.59598,"d":"5.596"},{"v":-0.610702,"d":"-0.611"},"plasma membrane","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus",null,"plastid",null,"plastid","mitochondrion","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G48860.2"]
["Os01t0955100-01","Rice","CALMODULIN-LIKE PROTEIN 31Similar to Calmodulin-like protein (Fragment). (Os01t0955100-01)","1",156,{"v":17082.1,"d":"17082.100"},{"v":3.99757,"d":"3.998"},{"v":-0.198718,"d":"-0.199"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G76640.1"]
["Os01t0962400-01","Rice","Ubiquitin-like, Ufm1 domain containing protein. (Os01t0962400-01)","1",102,{"v":10362.6,"d":"10362.600"},{"v":10.3997,"d":"10.400"},{"v":0.231373,"d":"0.231"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,null,"plastid","cytosol","nucleus","plastid","mitochondrion",null,null,"cytosol","extracellular",null,null,"AT1G77710.1"]
["Os02t0102900-01","Rice","chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chainSimilar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment). (Os02t0102900-01)","2",598,{"v":63801.8,"d":"63801.800"},{"v":5.5804,"d":"5.580"},{"v":-0.120569,"d":"-0.121"},"plastid","cytosol,plastid","cytosol",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:plastid:27992503","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G13470.1"]
["Os02t0105900-01","Rice","RPS4Similar to 40S ribosomal protein S4. (Os02t0105900-01)","2",265,{"v":29866.7,"d":"29866.700"},{"v":10.7979,"d":"10.798"},{"v":-0.433962,"d":"-0.434"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"cytosol","cytosol",null,"mitochondrion",null,"mitochondrion","plastid","cytosol","msms:plasma membrane:19502382,msms:nucleus:19621931,msms:plastid:21433289,msms:nucleus:23303719,msms:nucleus:23777608,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,23303719:Qi:Q:He,Lei:L:Chen,Yu:Y:Xu,Weichang:W:Yu:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT5G58420.1"]
["Os02t0115900-01","Rice","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2Endosperm lumenal binding protein. (Os02t0115900-01);Endosperm lumenal binding protein. (Os02t0115900-02);Similar to Endosperm lumenal binding protein. (Os02t0115900-03)","2",665,{"v":73394.3,"d":"73394.300"},{"v":4.81626,"d":"4.816"},{"v":-0.471278,"d":"-0.471"},"endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum",null,null,"AT5G42020.1"]
["Os02t0115900-02","Rice","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2Endosperm lumenal binding protein. (Os02t0115900-01);Endosperm lumenal binding protein. (Os02t0115900-02);Similar to Endosperm lumenal binding protein. (Os02t0115900-03)","2",665,{"v":73394.3,"d":"73394.300"},{"v":4.81626,"d":"4.816"},{"v":-0.471278,"d":"-0.471"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:extracellular:24083427,msms:nucleus:26035336,msms:plastid:27992503,msms:plasma membrane:28056797","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G42020.1"]
["Os02t0115900-03","Rice","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2Endosperm lumenal binding protein. (Os02t0115900-01);Endosperm lumenal binding protein. (Os02t0115900-02);Similar to Endosperm lumenal binding protein. (Os02t0115900-03)","2",445,{"v":49471.3,"d":"49471.300"},{"v":4.5072,"d":"4.507"},{"v":-0.626966,"d":"-0.627"},"cytosol,plasma membrane,nucleus","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",null,"endoplasmic reticulum",null,"cytosol","mitochondrion,cytosol,endoplasmic reticulum,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:nucleus:18203134,msms:plasma membrane:18557835,msms:cytosol:19685898,msms:nucleus:23777608,msms:golgi:25047511,msms:plasma membrane:27800704","18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008,23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G09080.1"]
["Os02t0117400-01","Rice","SPP1Peptidase A22B, signal peptide peptidase domain containing protein. (Os02t0117400-01)","2",343,{"v":37923.8,"d":"37923.800"},{"v":7.76076,"d":"7.761"},{"v":0.56035,"d":"0.560"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:18260611,gfp:endoplasmic reticulum:19688213,msms:plasma membrane:28056797","19688213:Tomoko:T:Tamura,Masaharu:M:Kuroda,Tetsuo:T:Oikawa,Junko:J:Kyozuka,Kaede:K:Terauchi,Yoshiro:Y:Ishimaru,Keiko:K:Abe,Tomiko:T:Asakura:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G03120.1"]
["Os02t0120600-01","Rice","UBIQUITIN-CONJUGATING ENZYME 13Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19) (Ubiquitin- protein ligase 9) (Ubiquitin carrier protein 9) (UBCAT4B). (Os02t0120600-01)","2",148,{"v":16601.1,"d":"16601.100"},{"v":7.96442,"d":"7.964"},{"v":-0.291892,"d":"-0.292"},"cytosol","mitochondrion,cytosol,vacuole,nucleus","nucleus",null,"vacuole",null,"cytosol","nucleus","mitochondrion","mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G64230.1"]
["Os02t0121300-01","Rice","LATERAL ROOTLESS2Cyclophilin, Peptidyl-prolyl cis-trans isomerase, Auxin signal transduction, Lateral root initiation, Stress tolerance (Os02t0121300-01)","2",172,{"v":18362,"d":"18362.000"},{"v":8.49045,"d":"8.490"},{"v":-0.156977,"d":"-0.157"},"extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:15069638,msms:nucleus:18022940,msms:plasma membrane:18260611,msms:extracellular:18372294,msms:extracellular:19038476,gfp:cytosol:21087465,msms:plastid:21433289,msms:extracellular:23159799,msms:nucleus:26035336,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797,msms:extracellular:28232208","21087465:Jun Cheul:JC:Ahn,Dae-Won:DW:Kim,Young Nim:YN:You,Min Sook:MS:Seok,Jeong Mee:JM:Park,Hyunsik:H:Hwang,Beom-Gi:BG:Kim,Sheng:S:Luan,Hong-Seog:HS:Park,Hye Sun:HS:Cho:2010,26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,28056797:Ning:N:Yang,Tai:T:Wang:2017,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT2G21130.1"]
["Os02t0122300-01","Rice","brassinosteroid receptor kinase (BRI1)-interacting protein 121, BRI1-interacting protein 121, brassinosteroid receptor kinase-interacting protein 121Translation initiation factor eIF3 subunit domain containing protein. (Os02t0122300-01);Translation initiation factor eIF3 subunit domain containing protein. (Os02t0122300-02)","2",231,{"v":25790.9,"d":"25790.900"},{"v":4.5111,"d":"4.511"},{"v":-1.0342,"d":"-1.034"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol","msms:cytosol:19685898,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009","AT5G37475.1"]
["Os02t0122300-02","Rice","brassinosteroid receptor kinase (BRI1)-interacting protein 121, BRI1-interacting protein 121, brassinosteroid receptor kinase-interacting protein 121Translation initiation factor eIF3 subunit domain containing protein. (Os02t0122300-01);Translation initiation factor eIF3 subunit domain containing protein. (Os02t0122300-02)","2",231,{"v":25790.9,"d":"25790.900"},{"v":4.5111,"d":"4.511"},{"v":-1.0342,"d":"-1.034"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G37475.1"]
["Os02t0134200-01","Rice","STRESS_TOLERANCE AND GRAIN_LENGTHDUF1645 family protein, Regulation of stress-tolerance and grain length (Os02t0134200-01)","2",255,{"v":26727.1,"d":"26727.100"},{"v":9.79668,"d":"9.797"},{"v":-0.499608,"d":"-0.500"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT1G70420.1"]
["Os02t0136800-01","Rice","Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0136800-01);Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0136800-02)","2",351,{"v":39274.7,"d":"39274.700"},{"v":5.33934,"d":"5.339"},{"v":-0.136752,"d":"-0.137"},"cytosol","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","cytosol,plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G24820.1"]
["Os02t0136800-02","Rice","Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0136800-01);Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0136800-02)","2",351,{"v":39274.7,"d":"39274.700"},{"v":5.33934,"d":"5.339"},{"v":-0.136752,"d":"-0.137"},"cytosol","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","cytosol,plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G24820.1"]
["Os02t0146600-01","Rice","EUKARYOTIC INITIATION FACTOR 4A-2Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A). (Os02t0146600-01)","2",414,{"v":47140.7,"d":"47140.700"},{"v":5.34988,"d":"5.350"},{"v":-0.270531,"d":"-0.271"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:15276429,msms:plastid:17189339,msms:cytosol:19685898,msms:plastid:21433289,msms:nucleus:23777608,msms:plasma membrane:27800704,msms:plastid:27992503","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,15276429:Md Monowar Karim:MM:Khan,Setsuko:S:Komatsu:2004,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G13920.1"]
["Os02t0178400-01","Rice","Protein transport protein SEC61 gamma subunit. (Os02t0178400-01)","2",69,{"v":7667.56,"d":"7667.560"},{"v":10.4906,"d":"10.491"},{"v":0.410145,"d":"0.410"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,plastid","plastid",null,"extracellular",null,"cytosol","endoplasmic reticulum",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G50460.1"]
["Os02t0182100-01","Rice","B-TYPE RESPONSE REGULATOR 4B-type response regulator, Cytokinin signaling (Os02t0182100-01)","2",626,{"v":68403.1,"d":"68403.100"},{"v":6.51384,"d":"6.514"},{"v":-0.601757,"d":"-0.602"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G31920.1"]
["Os02t0193000-01","Rice","LysM receptor-like kinase 1, LysM-type receptor-like kinase4, NFR5/NFP orthologProtein kinase-like domain containing protein. (Os02t0193000-01)","2",296,{"v":33727.3,"d":"33727.300"},{"v":12.8373,"d":"12.837"},{"v":-1.09696,"d":"-1.097"},"plasma membrane,nucleus","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G33580.1"]
["Os02t0199200-00","Rice","Disease resistance protein domain containing protein. (Os02t0199200-00)","2",515,{"v":55652,"d":"55652.000"},{"v":8.96722,"d":"8.967"},{"v":-0.0229126,"d":"-0.023"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G50950.1"]
["Os02t0207100-01","Rice","Similar to UDP-glycosyltransferase UGT99C4. (Os02t0207100-01)","2",574,{"v":63421.8,"d":"63421.800"},{"v":12.2821,"d":"12.282"},{"v":-0.468293,"d":"-0.468"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT4G34131.1"]
["Os02t0209000-01","Rice","Hypothetical conserved gene. (Os02t0209000-01)","2",714,{"v":80302.2,"d":"80302.200"},{"v":4.5501,"d":"4.550"},{"v":-0.263025,"d":"-0.263"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G52360.3"]
["Os02t0218200-01","Rice","Peptidase M1, membrane alanine aminopeptidase family protein. (Os02t0218200-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os02t0218200-02)","2",878,{"v":98458.4,"d":"98458.400"},{"v":4.8429,"d":"4.843"},{"v":-0.128815,"d":"-0.129"},"plasma membrane,plastid","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"cytosol",null,"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G33090.1"]
["Os02t0218200-02","Rice","Peptidase M1, membrane alanine aminopeptidase family protein. (Os02t0218200-01);Similar to APM1 (AMINOPEPTIDASE M1). (Os02t0218200-02)","2",231,{"v":25995.8,"d":"25995.800"},{"v":5.71201,"d":"5.712"},{"v":-0.349784,"d":"-0.350"},"cytosol,extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:extracellular:26072143","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015","AT4G33090.1"]
["Os02t0247800-01","Rice","EF-hand containing H+/cation exchanger 2, EF-hand containing CAX 2, Na+/Ca2+ Exchanger 4, Sodium/calcium exchanger 4, Na+/Ca2+ exchanger-like protein 2Similar to calcium ion binding protein. (Os02t0247800-01)","2",168,{"v":17903.1,"d":"17903.100"},{"v":6.97254,"d":"6.973"},{"v":0.569048,"d":"0.569"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G53210.1"]
["Os02t0256000-01","Rice","Hypothetical protein. (Os02t0256000-01)","2",191,{"v":21084.4,"d":"21084.400"},10.985,{"v":-0.391099,"d":"-0.391"},"mitochondrion,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane,extracellular,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","plastid"]
["Os02t0433600-01","Rice","basic helix-loop-helix protein 064Helix-loop-helix DNA-binding domain containing protein. (Os02t0433600-01)","2",343,{"v":37816.8,"d":"37816.800"},{"v":5.99339,"d":"5.993"},{"v":-0.88309,"d":"-0.883"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G19860.1"]
["Os02t0465400-01","Rice","Similar to 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC reductase) (Sterol delta-7-reductase) (Dwarf5 protein). (Os02t0465400-01)","2",450,{"v":51023.4,"d":"51023.400"},{"v":8.82225,"d":"8.822"},{"v":0.294444,"d":"0.294"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","mitochondrion","golgi","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plasma membrane","plasma membrane","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G50430.1"]
["Os02t0469200-01","Rice","Conserved hypothetical protein. (Os02t0469200-01);Similar to predicted protein. (Os02t0469200-02)","2",266,{"v":29988.9,"d":"29988.900"},{"v":6.61028,"d":"6.610"},{"v":-0.158271,"d":"-0.158"},"plasma membrane,extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT5G58100.2"]
["Os02t0469200-02","Rice","Conserved hypothetical protein. (Os02t0469200-01);Similar to predicted protein. (Os02t0469200-02)","2",471,{"v":53699.6,"d":"53699.600"},{"v":9.33559,"d":"9.336"},{"v":-0.229724,"d":"-0.230"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G58100.2"]
["Os02t0483500-01","Rice","malonyltransferase 2, flavonol 3-O-glucoside malonyltransferaseTransferase family protein. (Os02t0483500-01)","2",488,{"v":52422.4,"d":"52422.400"},{"v":6.83245,"d":"6.832"},{"v":-0.139754,"d":"-0.140"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","mitochondrion","cytosol","plastid","plastid",null,"mitochondrion","mitochondrion","plastid",null,null,"AT3G29670.1"]
["Os02t0513000-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 72Similar to Receptor protein kinase-like protein. (Os02t0513000-01)","2",526,{"v":57748.2,"d":"57748.200"},{"v":8.14744,"d":"8.147"},{"v":-0.611217,"d":"-0.611"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G13160.1"]
["Os02t0532500-01","Rice","GERMIN-LIKE PROTEIN 2-4Germin-like protein, Fungal blast and bacterial blight resistance (Os02t0532500-01)","2",229,{"v":24319.4,"d":"24319.400"},{"v":8.4954,"d":"8.495"},{"v":0.0729258,"d":"0.073"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","extracellular","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G10080.2"]
["Os02t0552000-01","Rice","Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t0552000-01);Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t0552000-02)","2",590,{"v":66701.3,"d":"66701.300"},{"v":7.33113,"d":"7.331"},{"v":0.381186,"d":"0.381"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G10950.1"]
["Os02t0552000-02","Rice","Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t0552000-01);Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t0552000-02)","2",590,{"v":66701.3,"d":"66701.300"},{"v":7.33113,"d":"7.331"},{"v":0.381186,"d":"0.381"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G10950.1"]
["Os02t0572900-01","Rice","Zinc finger, C2H2-type domain containing protein. (Os02t0572900-01)","2",384,{"v":40395.7,"d":"40395.700"},{"v":7.0356,"d":"7.036"},{"v":-0.329948,"d":"-0.330"},"cytosol,extracellular,nucleus","mitochondrion,cytosol,extracellular,nucleus","nucleus",null,"nucleus","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"extracellular","nucleus",null,null,"AT1G34370.1"]
["Os02t0575000-01","Rice","Conserved hypothetical protein. (Os02t0575000-01)","2",88,{"v":8879.74,"d":"8879.740"},{"v":10.1769,"d":"10.177"},{"v":-0.144318,"d":"-0.144"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G32340.1"]
["Os02t0597200-01","Rice","Conserved hypothetical protein. (Os02t0597200-01)","2",120,{"v":13086.2,"d":"13086.200"},{"v":8.74673,"d":"8.747"},0.055,"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G46530.1"]
["Os02t0634900-01","Rice","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunitProteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2). (Os02t0634900-01)","2",235,{"v":25845.8,"d":"25845.800"},{"v":5.13198,"d":"5.132"},{"v":-0.228085,"d":"-0.228"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"mitochondrion","plastid","cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G16470.1"]
["Os02t0653850-00","Rice","Hypothetical gene. (Os02t0653850-00)","2",97,{"v":10987.4,"d":"10987.400"},{"v":8.51789,"d":"8.518"},{"v":-0.0298969,"d":"-0.030"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G62730.1"]
["Os02t0653900-03","Rice","OsDAD1;3, DAD1;3Similar to Avr9/Cf-9 rapidly elicited protein 14 (Fragment). (Os02t0653900-03)","2",544,{"v":58926.3,"d":"58926.300"},{"v":10.0252,"d":"10.025"},{"v":-0.396875,"d":"-0.397"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G16820.1"]
["Os02t0656500-01","Rice","DnaJ domain protein A1DnaJ-like protein. (Os02t0656500-01);Similar to DnaJ-like protein. (Os02t0656500-02)","2",420,{"v":47136,"d":"47136.000"},{"v":7.35177,"d":"7.352"},{"v":-0.83881,"d":"-0.839"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:19621931,msms:nucleus:23777608,msms:plasma membrane:27800704,msms:plasma membrane:28056797","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G22060.1"]
["Os02t0656500-02","Rice","DnaJ domain protein A1DnaJ-like protein. (Os02t0656500-01);Similar to DnaJ-like protein. (Os02t0656500-02)","2",356,{"v":39848.3,"d":"39848.300"},{"v":6.73937,"d":"6.739"},{"v":-0.775843,"d":"-0.776"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","mitochondrion",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G44110.1"]
["Os02t0658100-01","Rice","TONOPLAST INTRINSIC PROTEIN 2;1Similar to tonoplast intrinsic protein2. (Os02t0658100-01)","2",206,{"v":20576.1,"d":"20576.100"},{"v":6.33266,"d":"6.333"},{"v":0.877184,"d":"0.877"},"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","msms:vacuole:18557835","18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT5G47450.1"]
["Os02t0666800-01","Rice","Protein of unknown function DUF788 family protein. (Os02t0666800-01)","2",174,{"v":19927.3,"d":"19927.300"},{"v":10.1144,"d":"10.114"},{"v":-0.256322,"d":"-0.256"},"golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","mitochondrion","golgi","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","golgi",null,null,"AT2G23940.2"]
["Os02t0673700-01","Rice","RICE DOF DAILY FLUCTUATIONS 1Similar to OSIGBa0103M18.3 protein. (Os02t0673700-01);Similar to OSIGBa0103M18.3 protein. (Os02t0673700-02)","2",381,{"v":38548,"d":"38548.000"},{"v":8.73548,"d":"8.735"},{"v":-0.3979,"d":"-0.398"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G24060.1"]
["Os02t0673700-02","Rice","RICE DOF DAILY FLUCTUATIONS 1Similar to OSIGBa0103M18.3 protein. (Os02t0673700-01);Similar to OSIGBa0103M18.3 protein. (Os02t0673700-02)","2",366,{"v":36906,"d":"36906.000"},{"v":8.73497,"d":"8.735"},{"v":-0.405191,"d":"-0.405"},"nucleus","plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT4G24060.1"]
["Os02t0689200-01","Rice","PURINE PERMEASE 11Protein of unknown function DUF250 domain containing protein. (Os02t0689200-01);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-02);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-03)","2",382,{"v":41938.3,"d":"41938.300"},{"v":7.12251,"d":"7.123"},{"v":0.581937,"d":"0.582"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"plasma membrane","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT1G44750.1"]
["Os02t0689200-02","Rice","PURINE PERMEASE 11Protein of unknown function DUF250 domain containing protein. (Os02t0689200-01);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-02);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-03)","2",102,{"v":11153.8,"d":"11153.800"},{"v":9.40991,"d":"9.410"},{"v":0.746078,"d":"0.746"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","extracellular",null,null,"AT4G18220.1"]
["Os02t0689200-03","Rice","PURINE PERMEASE 11Protein of unknown function DUF250 domain containing protein. (Os02t0689200-01);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-02);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-03)","2",385,{"v":41961.2,"d":"41961.200"},{"v":6.79811,"d":"6.798"},{"v":0.544675,"d":"0.545"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"plasma membrane","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G44750.1"]
["Os02t0722800-01","Rice","OsWD40-53WD40 repeat-like domain containing protein. (Os02t0722800-01);Similar to Peptidase S26A, signal peptidase I; WD40-like. (Os02t0722800-02)","2",{"v":1339,"d":"1,339"},{"v":144626,"d":"144626.000"},{"v":6.01667,"d":"6.017"},{"v":-0.309559,"d":"-0.310"},"plasma membrane","cytosol,peroxisome,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid","plastid","peroxisome","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT3G13300.1"]
["Os02t0722800-02","Rice","OsWD40-53WD40 repeat-like domain containing protein. (Os02t0722800-01);Similar to Peptidase S26A, signal peptidase I; WD40-like. (Os02t0722800-02)","2",350,{"v":38227.5,"d":"38227.500"},{"v":6.94939,"d":"6.949"},{"v":0.0631429,"d":"0.063"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G13290.1"]
["Os02t0745200-01","Rice","Hypothetical gene. (Os02t0745200-01);Hypothetical gene. (Os02t0745200-02)","2",71,{"v":7612.29,"d":"7612.290"},{"v":7.89037,"d":"7.890"},{"v":0.349296,"d":"0.349"},"endoplasmic reticulum,extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular",null,null,"AT2G04230.1"]
["Os02t0745200-02","Rice","Hypothetical gene. (Os02t0745200-01);Hypothetical gene. (Os02t0745200-02)","2",77,{"v":8598.38,"d":"8598.380"},{"v":6.8817,"d":"6.882"},{"v":0.0909091,"d":"0.091"},"cytosol,extracellular,golgi","mitochondrion,extracellular,nucleus,cytosol,golgi","nucleus",{"$nulls":3},"golgi","nucleus",null,"mitochondrion",null,null,"cytosol","extracellular",null,null,"AT1G05960.1"]
["Os02t0749500-01","Rice","Similar to SEC6. (Os02t0749500-01)","2",126,{"v":14438.9,"d":"14438.900"},{"v":5.58628,"d":"5.586"},{"v":0.402381,"d":"0.402"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","vacuole","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G71820.1"]
["Os02t0757900-01","Rice","Similar to Poly(A)-binding protein II-like. (Os02t0757900-01);Similar to Polyadenylate-binding protein 2. (Os02t0757900-02)","2",212,{"v":24085.1,"d":"24085.100"},{"v":4.81979,"d":"4.820"},{"v":-0.921226,"d":"-0.921"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G10350.1"]
["Os02t0757900-02","Rice","Similar to Poly(A)-binding protein II-like. (Os02t0757900-01);Similar to Polyadenylate-binding protein 2. (Os02t0757900-02)","2",216,{"v":24393.5,"d":"24393.500"},{"v":4.81979,"d":"4.820"},{"v":-0.922685,"d":"-0.923"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G10350.1"]
["Os02t0759400-01","Rice","OsRING-1Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0759400-01)","2",437,{"v":46645.4,"d":"46645.400"},{"v":8.75498,"d":"8.755"},{"v":-0.216476,"d":"-0.216"},"mitochondrion,endoplasmic reticulum,plastid,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","golgi",null,null,"AT3G05200.1"]
["Os02t0763200-01","Rice","Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (AtFUT1). (Os02t0763200-01)","2",575,{"v":65059.1,"d":"65059.100"},{"v":9.0299,"d":"9.030"},{"v":-0.350435,"d":"-0.350"},"plasma membrane","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"golgi",null,"golgi","cytosol",null,"mitochondrion",null,null,"nucleus","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G14080.1"]
["Os02t0769900-01","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)","2",527,{"v":56963.2,"d":"56963.200"},7.372,{"v":0.0149905,"d":"0.015"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G05750.2"]
["Os02t0769900-02","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)","2",520,{"v":56145.3,"d":"56145.300"},{"v":7.72495,"d":"7.725"},{"v":0.0326923,"d":"0.033"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT1G05750.2"]
["Os02t0769900-03","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0769900-01);Pentatricopeptide repeat domain containing protein. (Os02t0769900-02);Pentatricopeptide repeat domain containing protein. (Os02t0769900-03)","2",438,{"v":47681,"d":"47681.000"},{"v":6.4499,"d":"6.450"},{"v":0.140639,"d":"0.141"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT1G05750.2"]
["Os02t0782100-01","Rice","Uncharacterised domain NUC173 domain containing protein. (Os02t0782100-01)","2",{"v":1139,"d":"1,139"},{"v":127221,"d":"127221.000"},{"v":9.67893,"d":"9.679"},{"v":-0.291133,"d":"-0.291"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","mitochondrion,cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G34357.1"]
["Os02t0801600-00","Rice","Hypothetical conserved gene. (Os02t0801600-00)","2",127,{"v":13798.5,"d":"13798.500"},{"v":4.83957,"d":"4.840"},{"v":-0.270866,"d":"-0.271"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G22980.2"]
["Os02t0817200-01","Rice","OsWD40-59WD-40 repeat containing protein. (Os02t0817200-01);Similar to actin-related protein 2/3 complex subunit 1B. (Os02t0817200-02)","2",375,{"v":42025.7,"d":"42025.700"},{"v":7.95188,"d":"7.952"},{"v":-0.266133,"d":"-0.266"},"cytosol","mitochondrion,nucleus,cytosol,cytoskeleton,plastid","nucleus",null,"cytosol","plastid","cytosol","nucleus",null,"mitochondrion",null,null,"cytoskeleton","cytosol",null,null,"AT2G31300.1"]
["Os02t0817200-02","Rice","OsWD40-59WD-40 repeat containing protein. (Os02t0817200-01);Similar to actin-related protein 2/3 complex subunit 1B. (Os02t0817200-02)","2",84,{"v":9075.72,"d":"9075.720"},{"v":9.33446,"d":"9.334"},{"v":-0.444048,"d":"-0.444"},"cytosol,plastid,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus",null,null,"AT2G31300.1"]
["Os02t0823100-01","Rice","PLASMA MEMBRANE INTRINSIC PROTEIN 1;3Similar to Plasma membrane intrinsic protein (Plasma membrane integral protein ZmPIP1-5). (Os02t0823100-01)","2",288,{"v":30758.4,"d":"30758.400"},{"v":8.83472,"d":"8.835"},{"v":0.398264,"d":"0.398"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT4G00430.1"]
["Os02t0826500-01","Rice","ABC TRANSPORTER F FAMILY MEMBER 1ABC transporter-like domain containing protein. (Os02t0826500-01);Hypothetical conserved gene. (Os02t0826500-02);Hypothetical conserved gene. (Os02t0826500-03)","2",692,{"v":77183.9,"d":"77183.900"},{"v":6.5826,"d":"6.583"},{"v":-0.246387,"d":"-0.246"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol,plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G64550.1"]
["Os02t0826500-02","Rice","ABC TRANSPORTER F FAMILY MEMBER 1ABC transporter-like domain containing protein. (Os02t0826500-01);Hypothetical conserved gene. (Os02t0826500-02);Hypothetical conserved gene. (Os02t0826500-03)","2",452,{"v":51066.4,"d":"51066.400"},{"v":7.3455,"d":"7.346"},{"v":-0.315265,"d":"-0.315"},"cytosol,plasma membrane","mitochondrion,cytosol,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","cytosol,plasma membrane,plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G64550.1"]
["Os02t0826500-03","Rice","ABC TRANSPORTER F FAMILY MEMBER 1ABC transporter-like domain containing protein. (Os02t0826500-01);Hypothetical conserved gene. (Os02t0826500-02);Hypothetical conserved gene. (Os02t0826500-03)","2",322,{"v":36009.4,"d":"36009.400"},{"v":8.85166,"d":"8.852"},{"v":-0.275155,"d":"-0.275"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G64550.1"]
["Os03t0113700-01","Rice","IRON-SULFUR CLUSTER PROTEIN 24Similar to Heat shock 70 kDa protein, mitochondrial precursor. (Os03t0113700-01)","3",676,{"v":72569.4,"d":"72569.400"},{"v":5.57593,"d":"5.576"},{"v":-0.293195,"d":"-0.293"},"mitochondrion","mitochondrion,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:mitochondrion:16429260,msms:plastid:17189339,gfp:mitochondrion:17383966,msms:mitochondrion:19010998,msms:plastid:21433289,msms:mitochondrion:23027867,msms:plasma membrane:27800704,msms:plasma membrane:28056797","17383966:Katharine A:KA:Howell,Kim:K:Cheng,Monika W:MW:Murcha,Linne E:LE:Jenkin,A Harvey:AH:Millar,James:J:Whelan:2007,23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,28056797:Ning:N:Yang,Tai:T:Wang:2017,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G09590.1"]
["Os03t0113800-01","Rice","Tetratricopeptide-like helical domain containing protein. (Os03t0113800-01)","3",482,{"v":52257.1,"d":"52257.100"},{"v":4.59807,"d":"4.598"},{"v":-0.349378,"d":"-0.349"},"cytosol,plastid,nucleus","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","peroxisome,nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT5G41950.1"]
["Os03t0114900-01","Rice","Similar to putaive mitochondrial inner membrane protein [Oryza sativa (japonica cultivar-group)]. (Os03t0114900-01)","3",194,{"v":20407.1,"d":"20407.100"},{"v":9.74655,"d":"9.747"},{"v":-0.240206,"d":"-0.240"},"cytosol,peroxisome,plastid","mitochondrion,plasma membrane,extracellular,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,extracellular,plastid",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT1G17530.1"]
["Os03t0120400-01","Rice","Heavy metal transport/detoxification protein domain containing protein. (Os03t0120400-01)","3",193,{"v":21975.9,"d":"21975.900"},{"v":8.35328,"d":"8.353"},{"v":-0.648187,"d":"-0.648"},"plastid","mitochondrion,cytosol,extracellular,plastid","plastid",null,"extracellular","plastid","cytosol","plastid",null,"mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT2G18196.1"]
["Os03t0124000-01","Rice","Homeodomain-related domain containing protein. (Os03t0124000-01)","3",591,{"v":62757.9,"d":"62757.900"},{"v":6.95119,"d":"6.951"},{"v":-0.38088,"d":"-0.381"},"nucleus","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","nucleus",null,null,"AT5G41410.1"]
["Os03t0126900-01","Rice","Conserved hypothetical protein. (Os03t0126900-01)","3",119,{"v":12334,"d":"12334.000"},8.836,{"v":0.391597,"d":"0.392"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"endoplasmic reticulum","plasma membrane,peroxisome,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT1G67820.1"]
["Os03t0136500-01","Rice","Similar to protein-methionine-s-oxide reductase. (Os03t0136500-01)","3",138,{"v":15268.1,"d":"15268.100"},{"v":9.1579,"d":"9.158"},{"v":-0.4,"d":"-0.400"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","extracellular,plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G17705.1"]
["Os03t0156700-01","Rice","zebra-necrosis like proteinNickel/cobalt transporter, high-affinity domain containing protein. (Os03t0156700-01)","3",356,{"v":37059.8,"d":"37059.800"},{"v":10.2235,"d":"10.224"},{"v":0.476124,"d":"0.476"},"mitochondrion","mitochondrion,plasma membrane,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","plasma membrane","plastid",null,null,"AT4G35080.3"]
["Os03t0188500-01","Rice","ARABINOGALACTAN PROTEIN 3Glutelin family protein. (Os03t0188500-01)","3",124,{"v":11410.7,"d":"11410.700"},{"v":10.4465,"d":"10.447"},{"v":0.657258,"d":"0.657"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT4G15200.2"]
["Os03t0194500-01","Rice","Similar to Protein translocase/ protein transporter. (Os03t0194500-01)","3",203,{"v":20152.2,"d":"20152.200"},{"v":7.9787,"d":"7.979"},{"v":0.250739,"d":"0.251"},"plastid","mitochondrion,plasma membrane,extracellular,nucleus,cytosol,peroxisome","nucleus",null,"mitochondrion",null,"cytosol","plasma membrane,extracellular",null,"mitochondrion",null,null,"nucleus","peroxisome","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G55510.1"]
["Os03t0201200-01","Rice","Conserved hypothetical protein. (Os03t0201200-01);Hypothetical conserved gene. (Os03t0201200-02)","3",233,{"v":25080,"d":"25080.000"},{"v":10.2558,"d":"10.256"},{"v":-0.725751,"d":"-0.726"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G49890.1"]
["Os03t0201200-02","Rice","Conserved hypothetical protein. (Os03t0201200-01);Hypothetical conserved gene. (Os03t0201200-02)","3",190,{"v":21144.6,"d":"21144.600"},{"v":10.5076,"d":"10.508"},{"v":-0.849474,"d":"-0.849"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G49890.1"]
["Os03t0210883-00","Rice","Hypothetical gene. (Os03t0210883-00)","3",130,{"v":13573.8,"d":"13573.800"},{"v":8.80008,"d":"8.800"},{"v":-0.735385,"d":"-0.735"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G10870.2"]
["Os03t0227000-01","Rice","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP). (Os03t0227000-01)","3",897,{"v":99995.1,"d":"99995.100"},{"v":4.80665,"d":"4.807"},{"v":-0.0959866,"d":"-0.096"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT4G34450.1"]
["Os03t0241400-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 105Hypothetical protein. (Os03t0241400-00)","3",115,{"v":12540,"d":"12540.000"},{"v":12.1123,"d":"12.112"},{"v":-0.508696,"d":"-0.509"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT1G59610.1"]
["Os03t0246800-01","Rice","Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-01);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-02);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-03);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-04)","3",684,{"v":73542.3,"d":"73542.300"},{"v":5.53144,"d":"5.531"},{"v":-0.0567251,"d":"-0.057"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT1G01960.1"]
["Os03t0246800-02","Rice","Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-01);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-02);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-03);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-04)","3",712,{"v":76925.3,"d":"76925.300"},{"v":5.25652,"d":"5.257"},{"v":-0.0654494,"d":"-0.065"},"plasma membrane","mitochondrion,cytosol,plastid,golgi","plastid",{"$nulls":3},"mitochondrion","cytosol,golgi",null,"mitochondrion",null,"plastid",null,"cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G01960.1"]
["Os03t0246800-03","Rice","Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-01);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-02);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-03);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-04)","3",499,{"v":53379.5,"d":"53379.500"},{"v":6.37664,"d":"6.377"},{"v":0.156914,"d":"0.157"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT1G01960.1"]
["Os03t0246800-04","Rice","Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-01);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-02);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-03);Similar to Guanine nucleotide-exchange protein GEP2. (Os03t0246800-04)","3",363,{"v":39952.9,"d":"39952.900"},4.623,{"v":0.0280992,"d":"0.028"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"vacuole","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G60860.1"]
["Os03t0262200-00","Rice","Similar to predicted protein. (Os03t0262200-00)","3",597,{"v":64717.1,"d":"64717.100"},{"v":6.5119,"d":"6.512"},{"v":-0.409548,"d":"-0.410"},"cytosol,plastid","cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","nucleus","plastid","plastid",null,"plastid","nucleus","cytosol",null,null,"AT4G08500.1"]
["Os03t0265700-01","Rice","Similar to SH3 domain containing protein, expressed. (Os03t0265700-01);Similar to SH3 domain containing protein, expressed. (Os03t0265700-02)","3",{"v":1041,"d":"1,041"},{"v":113390,"d":"113390.000"},{"v":4.90962,"d":"4.910"},{"v":-0.260519,"d":"-0.261"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","cytosol","cytosol","msms:plasma membrane:19502382,msms:nucleus:23777608,msms:plasma membrane:27800704,msms:plastid:27992503","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G07360.1"]
["Os03t0265700-02","Rice","Similar to SH3 domain containing protein, expressed. (Os03t0265700-01);Similar to SH3 domain containing protein, expressed. (Os03t0265700-02)","3",595,{"v":64514.4,"d":"64514.400"},{"v":4.34746,"d":"4.347"},{"v":-0.330756,"d":"-0.331"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G07360.2"]
["Os03t0266200-01","Rice","enolase 3Similar to Enolase (EC 4.2.1.11) (Fragment). (Os03t0266200-01)","3",256,{"v":28043.9,"d":"28043.900"},{"v":4.39074,"d":"4.391"},{"v":-0.300781,"d":"-0.301"},"cytosol,plasma membrane,plastid","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G52890.2"]
["Os03t0269900-01","Rice","Protein of unknown function DUF604 family protein. (Os03t0269900-01)","3",527,{"v":58050.6,"d":"58050.600"},{"v":8.84931,"d":"8.849"},{"v":-0.343833,"d":"-0.344"},"cytosol,plasma membrane,golgi","mitochondrion,nucleus,cytosol,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","plastid",null,"mitochondrion",null,null,"cytosol","plasma membrane",null,null,"AT2G37730.1"]
["Os03t0270000-01","Rice","Protein of unknown function DUF296 domain containing protein. (Os03t0270000-01)","3",258,{"v":25860.5,"d":"25860.500"},{"v":7.18455,"d":"7.185"},{"v":-0.218605,"d":"-0.219"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G35270.1"]
["Os03t0270500-01","Rice","Protein of unknown function DUF668 family protein. (Os03t0270500-01)","3",286,{"v":32128.9,"d":"32128.900"},{"v":10.0757,"d":"10.076"},{"v":-0.323077,"d":"-0.323"},"plasma membrane","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",{"$nulls":3},"peroxisome","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G23160.1"]
["Os03t0280000-01","Rice","ABC TRANSPORTER B FAMILY MEMBER 13Similar to MDR-like ABC transporter. (Os03t0280000-01)","3",{"v":1411,"d":"1,411"},{"v":155654,"d":"155654.000"},{"v":6.44866,"d":"6.449"},{"v":0.04146,"d":"0.041"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G55320.1"]
["Os03t0281500-01","Rice","Catharanthus roseus receptor-like kinase1-like kinase 7Similar to Resistance protein candidate (Fragment). (Os03t0281500-01)","3",839,{"v":90485.5,"d":"90485.500"},{"v":8.66379,"d":"8.664"},{"v":1.66865E-3,"d":"0.002"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","mitochondrion,cytosol,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G46290.1"]
["Os03t0293700-00","Rice","Hypothetical conserved gene. (Os03t0293700-00)","3",180,{"v":19545.3,"d":"19545.300"},{"v":3.9383,"d":"3.938"},{"v":-0.542222,"d":"-0.542"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,"peroxisome",null,"cytosol","mitochondrion,nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT5G45140.1"]
["Os03t0296300-01","Rice","Similar to mitochondrial import inner membrane translocase subunit tim22. (Os03t0296300-01)","3",167,{"v":17236.9,"d":"17236.900"},{"v":7.85334,"d":"7.853"},{"v":0.18503,"d":"0.185"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"nucleus",null,"cytosol","plasma membrane,extracellular,plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G10110.1"]
["Os03t0297700-01","Rice","Pentatricopeptide repeat domain containing protein. (Os03t0297700-01)","3",259,{"v":30100.8,"d":"30100.800"},{"v":8.74218,"d":"8.742"},{"v":-0.246718,"d":"-0.247"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus","mitochondrion","plastid","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G62350.2"]
["Os03t0301200-01","Rice","COBRA-like protein 7 precursor. (Os03t0301200-01);Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os03t0301200-02)","3",671,{"v":72216.2,"d":"72216.200"},{"v":6.7905,"d":"6.791"},{"v":-0.0585693,"d":"-0.059"},"plasma membrane,extracellular,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT4G16120.1"]
["Os03t0301200-02","Rice","COBRA-like protein 7 precursor. (Os03t0301200-01);Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os03t0301200-02)","3",392,{"v":42648.1,"d":"42648.100"},{"v":8.58769,"d":"8.588"},{"v":-0.109184,"d":"-0.109"},"plasma membrane,endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,null,"AT4G16120.1"]
["Os03t0314700-01","Rice","IRON-SULFUR CLUSTER PROTEIN 11NIF system FeS cluster assembly, NifU, C-terminal domain containing protein. (Os03t0314700-01)","3",224,{"v":23457.9,"d":"23457.900"},{"v":4.59309,"d":"4.593"},{"v":-0.0924107,"d":"-0.092"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT4G01940.1"]
["Os03t0321400-01","Rice","Protein of unknown function DUF1692 domain containing protein. (Os03t0321400-01)","3",83,{"v":9395.38,"d":"9395.380"},{"v":7.67263,"d":"7.673"},{"v":0.124096,"d":"0.124"},"cytosol,plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G22200.1"]
["Os03t0327100-01","Rice","CUP SHAPED COTYLEDON 1Similar to CUC1. (Os03t0327100-01)","3",358,{"v":39201.4,"d":"39201.400"},{"v":5.60794,"d":"5.608"},{"v":-0.348324,"d":"-0.348"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G04060.1"]
["Os03t0331900-01","Rice","Yos1-like domain containing protein. (Os03t0331900-01)","3",135,{"v":15231.8,"d":"15231.800"},{"v":12.0754,"d":"12.075"},{"v":-0.271852,"d":"-0.272"},"mitochondrion,nucleus","mitochondrion,plastid,nucleus","plastid",{"$nulls":3},"nucleus","mitochondrion,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT2G37975.1"]
["Os03t0349600-01","Rice","Conserved hypothetical protein. (Os03t0349600-01);Conserved hypothetical protein. (Os03t0349600-03)","3",87,{"v":9255.86,"d":"9255.860"},{"v":12.5414,"d":"12.541"},{"v":-1.26092,"d":"-1.261"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT3G12500.1"]
["Os03t0349600-03","Rice","Conserved hypothetical protein. (Os03t0349600-01);Conserved hypothetical protein. (Os03t0349600-03)","3",148,{"v":16787.3,"d":"16787.300"},{"v":11.8202,"d":"11.820"},{"v":-0.318919,"d":"-0.319"},"mitochondrion","mitochondrion,plastid","plastid",{"$nulls":3},"mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G22070.1"]
["Os03t0358100-01","Rice","PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASESimilar to Glutathione peroxidase. (Os03t0358100-01)","3",169,{"v":19235,"d":"19235.000"},{"v":8.86962,"d":"8.870"},{"v":-0.426035,"d":"-0.426"},"plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT2G48150.1"]
["Os03t0359700-01","Rice","Mo25-like domain containing protein. (Os03t0359700-01);Similar to protein Mo25. (Os03t0359700-02)","3",336,{"v":38967.2,"d":"38967.200"},{"v":6.26518,"d":"6.265"},{"v":-0.128869,"d":"-0.129"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G18940.1"]
["Os03t0359700-02","Rice","Mo25-like domain containing protein. (Os03t0359700-01);Similar to protein Mo25. (Os03t0359700-02)","3",88,{"v":9722.84,"d":"9722.840"},{"v":11.9502,"d":"11.950"},{"v":-0.0761364,"d":"-0.076"},"mitochondrion","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"extracellular","nucleus","mitochondrion","mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G18940.1"]
["Os03t0360300-01","Rice","Conserved hypothetical protein. (Os03t0360300-01)","3",217,{"v":21749.8,"d":"21749.800"},{"v":10.8919,"d":"10.892"},{"v":-0.484793,"d":"-0.485"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol"]
["Os03t0564200-01","Rice","Protein of unknown function DUF952 family protein. (Os03t0564200-01)","3",119,{"v":13057.3,"d":"13057.300"},{"v":4.3477,"d":"4.348"},{"v":-0.205882,"d":"-0.206"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G01897.1"]
["Os03t0648400-01","Rice","DnaJ domain protein A4, YDJ1 proteinSimilar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)","3",244,{"v":26740.8,"d":"26740.800"},{"v":9.04191,"d":"9.042"},{"v":-0.869262,"d":"-0.869"},"cytosol","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"cytosol",null,"cytosol","mitochondrion,nucleus,golgi",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G44110.1"]
["Os03t0648400-02","Rice","DnaJ domain protein A4, YDJ1 proteinSimilar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)","3",417,{"v":46488.2,"d":"46488.200"},{"v":6.36064,"d":"6.361"},{"v":-0.777938,"d":"-0.778"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G44110.1"]
["Os03t0648400-03","Rice","DnaJ domain protein A4, YDJ1 proteinSimilar to DnaJ protein. (Os03t0648400-01);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-02);Similar to DnaJ protein homolog (DNAJ-1). (Os03t0648400-03);Non-protein coding transcript. (Os03t0648400-04)","3",417,{"v":46488.2,"d":"46488.200"},{"v":6.36064,"d":"6.361"},{"v":-0.777938,"d":"-0.778"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","mitochondrion",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G44110.1"]
["Os03t0711400-01","Rice","OsWD40-84Similar to Coatomer alpha subunit. (Os03t0711400-01);Similar to cDNA clone:J023075G08, full insert sequence. (Os03t0711400-02)","3",{"v":1218,"d":"1,218"},{"v":136388,"d":"136388.000"},{"v":6.8947,"d":"6.895"},{"v":-0.243924,"d":"-0.244"},"plasma membrane","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular","mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:cytosol:19685898,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G62020.1"]
["Os03t0711400-02","Rice","OsWD40-84Similar to Coatomer alpha subunit. (Os03t0711400-01);Similar to cDNA clone:J023075G08, full insert sequence. (Os03t0711400-02)","3",296,{"v":33125.1,"d":"33125.100"},{"v":8.76861,"d":"8.769"},{"v":-0.215203,"d":"-0.215"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular","plastid","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G62020.1"]
["Os03t0714100-01","Rice","Conserved hypothetical protein. (Os03t0714100-01)","3",147,{"v":15621.9,"d":"15621.900"},{"v":11.7077,"d":"11.708"},{"v":0.0482993,"d":"0.048"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","extracellular",null,null,"AT5G50520.1"]
["Os03t0717900-01","Rice","Similar to ABRH7 (Fragment). (Os03t0717900-01);Similar to mRNA, clone: RTFL01-13-K15. (Os03t0717900-02)","3",455,{"v":49959.4,"d":"49959.400"},{"v":9.23865,"d":"9.239"},{"v":-0.426374,"d":"-0.426"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G17800.1"]
["Os03t0717900-02","Rice","Similar to ABRH7 (Fragment). (Os03t0717900-01);Similar to mRNA, clone: RTFL01-13-K15. (Os03t0717900-02)","3",328,{"v":36582.3,"d":"36582.300"},{"v":5.64284,"d":"5.643"},{"v":-0.358841,"d":"-0.359"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT3G17800.1"]
["Os03t0721400-01","Rice","Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-01);Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-02)","3",209,{"v":21728.3,"d":"21728.300"},{"v":10.5953,"d":"10.595"},{"v":0.184211,"d":"0.184"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","endoplasmic reticulum","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plastid","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G06660.1"]
["Os03t0721400-02","Rice","Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-01);Protein of unknown function DUF841, eukaryotic family protein. (Os03t0721400-02)","3",209,{"v":21728.3,"d":"21728.300"},{"v":10.5953,"d":"10.595"},{"v":0.184211,"d":"0.184"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","endoplasmic reticulum","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plastid",null,null,"AT5G06660.1"]
["Os03t0728800-01","Rice","RNA helicase 16Similar to RNA helicase (Fragment). (Os03t0728800-01);Similar to cDNA clone:J013129E17, full insert sequence. (Os03t0728800-02)","3",670,{"v":74336,"d":"74336.000"},{"v":8.67492,"d":"8.675"},{"v":-0.518209,"d":"-0.518"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,"plastid","cytosol","nucleus",null,null,"AT4G34910.1"]
["Os03t0728800-02","Rice","RNA helicase 16Similar to RNA helicase (Fragment). (Os03t0728800-01);Similar to cDNA clone:J013129E17, full insert sequence. (Os03t0728800-02)","3",205,{"v":23496,"d":"23496.000"},{"v":10.7323,"d":"10.732"},{"v":-1.08976,"d":"-1.090"},"nucleus","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT4G34910.1"]
["Os03t0748000-01","Rice","YT521-B-like protein family protein. (Os03t0748000-01);Similar to YT521-B-like family protein, expressed. (Os03t0748000-02)","3",661,{"v":71625.6,"d":"71625.600"},{"v":8.61589,"d":"8.616"},{"v":-0.795613,"d":"-0.796"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,"plasma membrane",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G13460.1"]
["Os03t0748000-02","Rice","YT521-B-like protein family protein. (Os03t0748000-01);Similar to YT521-B-like family protein, expressed. (Os03t0748000-02)","3",417,{"v":46356,"d":"46356.000"},{"v":9.60062,"d":"9.601"},{"v":-0.841007,"d":"-0.841"},"cytosol,plastid,nucleus","cytosol,plasma membrane,plastid,nucleus","nucleus",null,"plasma membrane","plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus",null,null,"AT3G13460.2"]
["Os03t0758800-01","Rice","Similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-4D). (Os03t0758800-01)","3",161,{"v":17545.7,"d":"17545.700"},{"v":6.07686,"d":"6.077"},{"v":-0.473913,"d":"-0.474"},"plasma membrane,nucleus","mitochondrion,nucleus,cytosol,vacuole,cytoskeleton,plastid","nucleus",null,"vacuole",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytoskeleton","cytosol","msms:plasma membrane:18260611,msms:nucleus:23777608,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G13950.1"]
["Os03t0761200-01","Rice","Ankyrin repeat containing protein. (Os03t0761200-01)","3",335,{"v":36547.2,"d":"36547.200"},{"v":4.45712,"d":"4.457"},{"v":-0.135224,"d":"-0.135"},"cytosol","mitochondrion,cytosol,plastid,nucleus","cytosol",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G65860.3"]
["Os03t0780400-01","Rice","actin depolymerizing factor 2Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os03t0780400-01)","3",145,{"v":16794.9,"d":"16794.900"},{"v":5.73195,"d":"5.732"},{"v":-0.484138,"d":"-0.484"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol","msms:extracellular:18372294,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008","AT2G31200.1"]
["Os03t0787000-01","Rice","Similar to Syntaxin. (Os03t0787000-01)","3",330,{"v":35613.3,"d":"35613.300"},{"v":7.67338,"d":"7.673"},{"v":-0.340606,"d":"-0.341"},"plasma membrane","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"cytosol",null,"cytosol","golgi",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:19502382,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G11820.1"]
["Os03t0810100-01","Rice","ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 4Similar to TRNA isopentenyl transferase-like protein (Adenylate isopentenyltransferase) (EC 2.5.1.27). (Os03t0810100-01)","3",357,{"v":38950.7,"d":"38950.700"},{"v":8.82012,"d":"8.820"},{"v":-0.119608,"d":"-0.120"},"extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","mitochondrion","msms:extracellular:26072143","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015","AT3G63110.1"]
["Os03t0818800-01","Rice","INDETERMINATE SPIKELET 1AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os03t0818800-01);Similar to APETALA2-like protein. (Os03t0818800-02)","3",434,{"v":47279.3,"d":"47279.300"},{"v":7.97096,"d":"7.971"},{"v":-0.575806,"d":"-0.576"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G28550.3"]
["Os03t0818800-02","Rice","INDETERMINATE SPIKELET 1AP2 domain containing transcription factor, Control of inflorescence architecture, Floral meristem establishment (Os03t0818800-01);Similar to APETALA2-like protein. (Os03t0818800-02)","3",430,{"v":46773.8,"d":"46773.800"},{"v":7.97303,"d":"7.973"},{"v":-0.563721,"d":"-0.564"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G28550.3"]
["Os03t0819900-01","Rice","small GTP-binding protein OsRab8A5Similar to RAB8C. (Os03t0819900-01)","3",214,{"v":23780.2,"d":"23780.200"},{"v":8.0206,"d":"8.021"},{"v":-0.338785,"d":"-0.339"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"cytosol",null,"cytosol","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:18557835,msms:plastid:21433289,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT3G46060.1"]
["Os03t0823700-01","Rice","small GTP-binding protein OsRab11B2Similar to Ras-related protein Rab11C. (Os03t0823700-01);Similar to Ras-related protein Rab11C. (Os03t0823700-02)","3",215,{"v":23805.2,"d":"23805.200"},{"v":6.52018,"d":"6.520"},{"v":-0.306047,"d":"-0.306"},"plasma membrane","mitochondrion,nucleus,cytosol,vacuole,plastid","nucleus",null,"vacuole",null,"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G07410.1"]
["Os03t0823700-02","Rice","small GTP-binding protein OsRab11B2Similar to Ras-related protein Rab11C. (Os03t0823700-01);Similar to Ras-related protein Rab11C. (Os03t0823700-02)","3",90,{"v":10015,"d":"10015.000"},{"v":7.38648,"d":"7.386"},{"v":0.0244444,"d":"0.024"},"cytosol,plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G07410.1"]
["Os03t0833700-01","Rice","RNA 3'-terminal phosphate cyclase family protein. (Os03t0833700-01)","3",377,{"v":40956.5,"d":"40956.500"},{"v":8.88578,"d":"8.886"},{"v":-0.0832891,"d":"-0.083"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT5G22100.1"]
["Os03t0836000-01","Rice","Actin 3Similar to Actin 7 (Actin 2). (Os03t0836000-01)","3",377,{"v":41708.1,"d":"41708.100"},{"v":5.16243,"d":"5.162"},{"v":-0.180902,"d":"-0.181"},"plasma membrane,plastid","mitochondrion,cytosol,cytoskeleton","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytoskeleton","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT5G09810.1"]
["Os03t0843100-01","Rice","small GTP-binding protein OsRab11A1Ras GTPase family protein. (Os03t0843100-01);Ras GTPase family protein. (Os03t0843100-02)","3",223,{"v":24483.9,"d":"24483.900"},{"v":7.40976,"d":"7.410"},{"v":-0.176233,"d":"-0.176"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G09630.1"]
["Os03t0843100-02","Rice","small GTP-binding protein OsRab11A1Ras GTPase family protein. (Os03t0843100-01);Ras GTPase family protein. (Os03t0843100-02)","3",223,{"v":24483.9,"d":"24483.900"},{"v":7.40976,"d":"7.410"},{"v":-0.176233,"d":"-0.176"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G09630.1"]
["Os03t0852300-01","Rice","DNA POLYMERASE II SUBUNIT B3-2Histone-fold domain containing protein. (Os03t0852300-01)","3",303,{"v":32857,"d":"32857.000"},{"v":11.1191,"d":"11.119"},{"v":-1.33399,"d":"-1.334"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT1G07980.1"]
["Os03t0859300-01","Rice","Similar to La domain containing protein, expressed. (Os03t0859300-01);Winged helix repressor DNA-binding domain containing protein. (Os03t0859300-02)","3",381,{"v":41325,"d":"41325.000"},{"v":6.8411,"d":"6.841"},{"v":-0.830446,"d":"-0.830"},"nucleus","cytosol,peroxisome,plastid,nucleus","nucleus",null,"cytosol","plastid","peroxisome","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT5G66100.1"]
["Os03t0859300-02","Rice","Similar to La domain containing protein, expressed. (Os03t0859300-01);Winged helix repressor DNA-binding domain containing protein. (Os03t0859300-02)","3",383,{"v":41510.2,"d":"41510.200"},{"v":6.8411,"d":"6.841"},{"v":-0.836292,"d":"-0.836"},"nucleus","cytosol,peroxisome,plastid,nucleus","nucleus",null,"cytosol","plastid","peroxisome","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT5G66100.1"]
["Os04t0111900-01","Rice","resistance gene analog PIC22Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)","4",{"v":1099,"d":"1,099"},{"v":123127,"d":"123127.000"},{"v":7.16454,"d":"7.165"},{"v":0.0360328,"d":"0.036"},"mitochondrion,cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"mitochondrion","cytosol",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT3G07040.1"]
["Os04t0111900-02","Rice","resistance gene analog PIC22Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)","4",{"v":1099,"d":"1,099"},{"v":123127,"d":"123127.000"},{"v":7.16454,"d":"7.165"},{"v":0.0360328,"d":"0.036"},"mitochondrion,cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"mitochondrion","cytosol",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT3G07040.1"]
["Os04t0118500-01","Rice","Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (DlPar13). (Os04t0118500-01)","4",123,{"v":13340.7,"d":"13340.700"},{"v":9.45301,"d":"9.453"},{"v":-0.473984,"d":"-0.474"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G18040.1"]
["Os04t0194500-01","Rice","ABC TRANSPORTER G FAMILY MEMBER 8Similar to ABC transporter-like protein. (Os04t0194500-01)","4",{"v":1065,"d":"1,065"},{"v":118736,"d":"118736.000"},{"v":8.86133,"d":"8.861"},{"v":-0.150986,"d":"-0.151"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT5G60740.1"]
["Os04t0244400-01","Rice","GLUTAREDOXIN 12Thioredoxin fold domain containing protein. (Os04t0244400-01);Thioredoxin fold domain containing protein. (Os04t0244400-02)","4",319,{"v":35389.1,"d":"35389.100"},{"v":8.18076,"d":"8.181"},{"v":-0.325078,"d":"-0.325"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G42150.1"]
["Os04t0244400-02","Rice","GLUTAREDOXIN 12Thioredoxin fold domain containing protein. (Os04t0244400-01);Thioredoxin fold domain containing protein. (Os04t0244400-02)","4",319,{"v":35389.1,"d":"35389.100"},{"v":8.18076,"d":"8.181"},{"v":-0.325078,"d":"-0.325"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G42150.1"]
["Os04t0371200-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 148Similar to OSIGBa0134J07.8 protein. (Os04t0371200-00)","4",433,{"v":49278.6,"d":"49278.600"},{"v":5.47041,"d":"5.470"},{"v":-0.0672055,"d":"-0.067"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","plasma membrane","nucleus","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G16130.1"]
["Os04t0385900-01","Rice","Similar to OSIGBa0148P16.1 protein. (Os04t0385900-01)","4",117,{"v":11679.9,"d":"11679.900"},{"v":11.3309,"d":"11.331"},{"v":-0.147863,"d":"-0.148"},"extracellular,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","extracellular",null,null,"AT5G43260.1"]
["Os04t0411800-01","Rice","Similar to H0717B12.5 protein. (Os04t0411800-01)","4",344,{"v":38647.6,"d":"38647.600"},{"v":6.95624,"d":"6.956"},{"v":-0.165407,"d":"-0.165"},"endoplasmic reticulum,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","golgi",null,null,"AT2G36290.1"]
["Os04t0430100-01","Rice","RPS10-2Similar to 40S ribosomal protein S10-1. (Os04t0430100-01)","4",183,{"v":20263.9,"d":"20263.900"},{"v":10.1983,"d":"10.198"},{"v":-0.877596,"d":"-0.878"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:nucleus:19621931,msms:cytosol:19685898,msms:plastid:21433289,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G25740.1"]
["Os04t0430600-01","Rice","Similar to OSIGBa0160I14.1 protein. (Os04t0430600-01)","4",337,{"v":35226.7,"d":"35226.700"},{"v":10.5043,"d":"10.504"},{"v":-0.134125,"d":"-0.134"},"cytosol,peroxisome,plastid,nucleus","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome,plastid","nucleus",null,null,"mitochondrion","cytosol","plasma membrane,nucleus",null,"plastid",null,"plastid","nucleus","peroxisome",null,null,"AT1G45688.1"]
["Os04t0436800-01","Rice","Pentatricopeptide repeat domain containing protein. (Os04t0436800-01)","4",717,{"v":78873.5,"d":"78873.500"},{"v":6.17475,"d":"6.175"},{"v":0.0460251,"d":"0.046"},"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT3G26540.1"]
["Os04t0470300-01","Rice","Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os04t0470300-01);Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os04t0470300-02)","4",223,{"v":23839.2,"d":"23839.200"},{"v":10.0766,"d":"10.077"},{"v":0.3287,"d":"0.329"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","plasma membrane","plastid","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT3G57280.1"]
["Os04t0470300-02","Rice","Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os04t0470300-01);Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os04t0470300-02)","4",223,{"v":23839.2,"d":"23839.200"},{"v":10.0766,"d":"10.077"},{"v":0.3287,"d":"0.329"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","plasma membrane","plastid","mitochondrion",null,"mitochondrion","plastid","plastid","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT3G57280.1"]
["Os04t0470500-00","Rice","NB-ARC domain containing protein. (Os04t0470500-00)","4",928,{"v":102908,"d":"102908.000"},{"v":7.79784,"d":"7.798"},{"v":0.0149784,"d":"0.015"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G26090.1"]
["Os04t0485000-01","Rice","19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 7Similar to 26S proteasome subunit RPN7. (Os04t0485000-01)","4",389,{"v":44087.2,"d":"44087.200"},{"v":5.71767,"d":"5.718"},{"v":-0.0817481,"d":"-0.082"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G24820.2"]
["Os04t0486900-01","Rice","Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os04t0486900-01)","4",153,{"v":16359.1,"d":"16359.100"},{"v":8.25171,"d":"8.252"},{"v":0.580392,"d":"0.580"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular",null,null,"AT1G67600.1"]
["Os04t0487300-01","Rice","Similar to DNA-directed RNA polymerases II 24 kDa polypeptide. (Os04t0487300-01)","4",167,{"v":19536.5,"d":"19536.500"},{"v":7.88593,"d":"7.886"},{"v":-0.466467,"d":"-0.466"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","plastid,nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT3G22320.1"]
["Os04t0501000-00","Rice","Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0501000-00)","4",152,{"v":16911,"d":"16911.000"},{"v":10.9629,"d":"10.963"},{"v":-0.698684,"d":"-0.699"},"plastid","mitochondrion,vacuole,cytosol,plastid","plastid",null,"vacuole",null,"cytosol","plastid","mitochondrion","plastid",null,"plastid","cytosol","cytosol","msms:nucleus:23777608,msms:plasma membrane:27800704,msms:plastid:27992503","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G55280.2"]
["Os04t0502300-01","Rice","Similar to 40S ribosomal protein S11. (Os04t0502300-01)","4",160,{"v":18002.3,"d":"18002.300"},{"v":11.2793,"d":"11.279"},{"v":-0.501875,"d":"-0.502"},"cytosol,plasma membrane,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"plastid",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G48930.1"]
["Os04t0508800-01","Rice","RING finger proteinSimilar to Retroelement pol polyprotein-like. (Os04t0508800-01)","4",708,{"v":77291.1,"d":"77291.100"},{"v":8.30182,"d":"8.302"},{"v":-0.461864,"d":"-0.462"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G60710.1"]
["Os04t0509600-01","Rice","AMMONIUM TRANSPORTER-1;1Ammonium transporter, Ammonium uptake, Ammonium transport (Os04t0509600-01);Similar to OSIGBa0157K09-H0214G12.4 protein. (Os04t0509600-02)","4",498,{"v":52652.5,"d":"52652.500"},{"v":7.29188,"d":"7.292"},{"v":0.481124,"d":"0.481"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:18260611,msms:plasma membrane:18557835,msms:vacuole:18557835,msms:plasma membrane:19502382,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT4G13510.1"]
["Os04t0509600-02","Rice","AMMONIUM TRANSPORTER-1;1Ammonium transporter, Ammonium uptake, Ammonium transport (Os04t0509600-01);Similar to OSIGBa0157K09-H0214G12.4 protein. (Os04t0509600-02)","4",434,{"v":46000.3,"d":"46000.300"},{"v":7.63599,"d":"7.636"},{"v":0.435023,"d":"0.435"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,null,"AT1G64780.1"]
["Os04t0521700-01","Rice","Similar to OSIGBa0131L05.9 protein. (Os04t0521700-01)","4",157,{"v":16420.3,"d":"16420.300"},{"v":4.59051,"d":"4.591"},{"v":-0.282803,"d":"-0.283"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G01840.1"]
["Os04t0572100-01","Rice","Hypothetical gene. (Os04t0572100-01)","4",74,{"v":8123.02,"d":"8123.020"},{"v":12.8536,"d":"12.854"},{"v":-0.167568,"d":"-0.168"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT5G58940.1"]
["Os04t0599000-01","Rice","WALL-ASSOCIATED KINASE GENE 53Similar to WAK53a - OsWAK receptor-like protein kinase. (Os04t0599000-01);Serine/threonine protein kinase-related domain containing protein. (Os04t0599000-02)","4",317,{"v":34285.1,"d":"34285.100"},{"v":6.42563,"d":"6.426"},{"v":0.0652997,"d":"0.065"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G21270.1"]
["Os04t0599000-02","Rice","WALL-ASSOCIATED KINASE GENE 53Similar to WAK53a - OsWAK receptor-like protein kinase. (Os04t0599000-01);Serine/threonine protein kinase-related domain containing protein. (Os04t0599000-02)","4",712,{"v":78746.2,"d":"78746.200"},{"v":6.78529,"d":"6.785"},{"v":-0.0356742,"d":"-0.036"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G21230.1"]
["Os04t0602300-01","Rice","Similar to B0403H10-OSIGBa0105A11.17 protein. (Os04t0602300-01)","4",203,{"v":24197.4,"d":"24197.400"},{"v":6.00072,"d":"6.001"},{"v":-1.28325,"d":"-1.283"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT2G38250.1"]
["Os04t0606000-01","Rice","Transferase family protein. (Os04t0606000-01)","4",466,{"v":49814,"d":"49814.000"},{"v":5.76045,"d":"5.760"},{"v":-0.0890558,"d":"-0.089"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion",null,null,"AT5G39050.1"]
["Os04t0611400-01","Rice","Similar to Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f). (Os04t0611400-01)","4",632,{"v":69103.9,"d":"69103.900"},{"v":5.22516,"d":"5.225"},{"v":-0.225475,"d":"-0.225"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","cytosol,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G20110.1"]
["Os04t0612600-01","Rice","COPE1Similar to Coatomer-like protein, epsilon subunit. (Os04t0612600-01);Similar to Coatomer-like protein, epsilon subunit. (Os04t0612600-02)","4",287,{"v":31582.9,"d":"31582.900"},{"v":5.14544,"d":"5.145"},{"v":0.0313589,"d":"0.031"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","msms:nucleus:19621931,msms:cytosol:19685898,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G30630.1"]
["Os04t0612600-02","Rice","COPE1Similar to Coatomer-like protein, epsilon subunit. (Os04t0612600-01);Similar to Coatomer-like protein, epsilon subunit. (Os04t0612600-02)","4",287,{"v":31582.9,"d":"31582.900"},{"v":5.14544,"d":"5.145"},{"v":0.0313589,"d":"0.031"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT1G30630.1"]
["Os04t0616700-01","Rice","Hypothetical conserved gene. (Os04t0616700-01);Hypothetical conserved gene. (Os04t0616700-02);Similar to H0525G02.12 protein. (Os04t0616700-03);Similar to H0525G02.12 protein. (Os04t0616700-04)","4",137,{"v":14773.5,"d":"14773.500"},{"v":4.87347,"d":"4.873"},{"v":-0.177372,"d":"-0.177"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"extracellular","plasma membrane,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G56130.2"]
["Os04t0616700-02","Rice","Hypothetical conserved gene. (Os04t0616700-01);Hypothetical conserved gene. (Os04t0616700-02);Similar to H0525G02.12 protein. (Os04t0616700-03);Similar to H0525G02.12 protein. (Os04t0616700-04)","4",88,{"v":9220.8,"d":"9220.800"},{"v":4.14707,"d":"4.147"},{"v":-0.0602273,"d":"-0.060"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G56130.2"]
["Os04t0616700-03","Rice","Hypothetical conserved gene. (Os04t0616700-01);Hypothetical conserved gene. (Os04t0616700-02);Similar to H0525G02.12 protein. (Os04t0616700-03);Similar to H0525G02.12 protein. (Os04t0616700-04)","4",{"v":1022,"d":"1,022"},{"v":111602,"d":"111602.000"},{"v":6.22219,"d":"6.222"},{"v":-0.121037,"d":"-0.121"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,"plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G56130.2"]
["Os04t0616700-04","Rice","Hypothetical conserved gene. (Os04t0616700-01);Hypothetical conserved gene. (Os04t0616700-02);Similar to H0525G02.12 protein. (Os04t0616700-03);Similar to H0525G02.12 protein. (Os04t0616700-04)","4",325,{"v":35845.7,"d":"35845.700"},{"v":6.42566,"d":"6.426"},{"v":-0.236308,"d":"-0.236"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G56120.3"]
["Os04t0620700-01","Rice","nucleolin 1Nucleolin-like protein, Salt stress response (Os04t0620700-01);Hypothetical conserved gene. (Os04t0620700-02)","4",707,{"v":75256.9,"d":"75256.900"},{"v":4.58106,"d":"4.581"},{"v":-1.30085,"d":"-1.301"},"nucleus","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","nucleus",null,null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:23777608,msms:golgi:25047511,msms:nucleus:26035336","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT3G18610.1"]
["Os04t0620700-02","Rice","nucleolin 1Nucleolin-like protein, Salt stress response (Os04t0620700-01);Hypothetical conserved gene. (Os04t0620700-02)","4",569,{"v":60538.9,"d":"60538.900"},{"v":4.37216,"d":"4.372"},{"v":-1.27733,"d":"-1.277"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G18610.3"]
["Os04t0636100-01","Rice","Glycosyl transferase, family 8 protein. (Os04t0636100-01)","4",556,{"v":63926.7,"d":"63926.700"},{"v":8.80592,"d":"8.806"},{"v":-0.281835,"d":"-0.282"},"mitochondrion,golgi","mitochondrion,plastid,golgi","plastid",null,"golgi","mitochondrion","golgi","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","golgi",null,null,"AT2G20810.1"]
["Os04t0665800-01","Rice","Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)","4",301,{"v":32760.2,"d":"32760.200"},{"v":5.93897,"d":"5.939"},{"v":-0.172425,"d":"-0.172"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G42130.4"]
["Os04t0665800-02","Rice","Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)","4",301,{"v":32760.2,"d":"32760.200"},{"v":5.93897,"d":"5.939"},{"v":-0.172425,"d":"-0.172"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G42130.4"]
["Os04t0665800-03","Rice","Similar to H1005F08.12 protein. (Os04t0665800-01);Similar to H1005F08.12 protein. (Os04t0665800-02);Similar to H1005F08.12 protein. (Os04t0665800-03)","4",115,{"v":12139.6,"d":"12139.600"},{"v":11.5972,"d":"11.597"},{"v":-0.242609,"d":"-0.243"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G58010.2"]
["Os04t0671200-01","Rice","POLYAMINE OXIDASE 4Polyamine oxidase, Seed germination (Os04t0671200-01);Similar to H0624F09.9 protein. (Os04t0671200-02)","4",487,{"v":52916.3,"d":"52916.300"},{"v":5.19895,"d":"5.199"},{"v":-0.0408624,"d":"-0.041"},"cytosol,peroxisome,plastid","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,null,"mitochondrion","peroxisome","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G59050.1"]
["Os04t0671200-02","Rice","POLYAMINE OXIDASE 4Polyamine oxidase, Seed germination (Os04t0671200-01);Similar to H0624F09.9 protein. (Os04t0671200-02)","4",340,{"v":37176.7,"d":"37176.700"},{"v":5.5796,"d":"5.580"},{"v":-0.0426471,"d":"-0.043"},"cytosol,peroxisome","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G43020.1"]
["Os04t0672100-01","Rice","Similar to Phytosulfokine receptor precursor (EC 2.7.1.37) (Phytosulfokine LRR receptor kinase). (Os04t0672100-01)","4",{"v":1012,"d":"1,012"},{"v":109678,"d":"109678.000"},{"v":6.31815,"d":"6.318"},{"v":-0.0458498,"d":"-0.046"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G02220.1"]
["Os04t0675500-01","Rice","oligosaccharyltransferase subunit Stt3aSimilar to Itm1 protein. (Os04t0675500-01);Non-protein coding transcript. (Os04t0675500-02);Similar to Itm1 protein. (Os04t0675500-03)","4",721,{"v":80736.3,"d":"80736.300"},{"v":9.04384,"d":"9.044"},{"v":0.372399,"d":"0.372"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","plastid","golgi","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G34130.1"]
["Os04t0675500-03","Rice","oligosaccharyltransferase subunit Stt3aSimilar to Itm1 protein. (Os04t0675500-01);Non-protein coding transcript. (Os04t0675500-02);Similar to Itm1 protein. (Os04t0675500-03)","4",721,{"v":80736.3,"d":"80736.300"},{"v":9.04384,"d":"9.044"},{"v":0.372399,"d":"0.372"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","plastid","golgi","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT1G34130.1"]
["Os04t0685100-01","Rice","Ribosomal biogenesis regulatory protein family protein. (Os04t0685100-01)","4",330,{"v":36852.1,"d":"36852.100"},{"v":10.5302,"d":"10.530"},{"v":-1.0997,"d":"-1.100"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:18203134,msms:nucleus:23777608","18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008,23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT2G37990.1"]
["Os04t0692100-01","Rice","Similar to Tubulin folding cofactor B. (Os04t0692100-01)","4",246,{"v":27600.4,"d":"27600.400"},{"v":5.07565,"d":"5.076"},{"v":-0.606911,"d":"-0.607"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","cytosol","plastid,nucleus",null,"plastid",null,"plastid","nucleus","cytosol",null,null,"AT3G10220.1"]
["Os05t0107900-01","Rice","drought-induced 19-6Similar to Protein DEHYDRATION-INDUCED 19 homolog 6. (Os05t0107900-01)","5",179,{"v":20458.6,"d":"20458.600"},{"v":4.48533,"d":"4.485"},{"v":-0.753631,"d":"-0.754"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G56280.1"]
["Os05t0108950-00","Rice","Hypothetical gene. (Os05t0108950-00)","5",104,{"v":11634,"d":"11634.000"},{"v":8.33799,"d":"8.338"},{"v":-0.0394231,"d":"-0.039"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT5G19700.1"]
["Os05t0114800-01","Rice","Hypothetical gene. (Os05t0114800-01)","5",122,{"v":13029.4,"d":"13029.400"},{"v":12.4604,"d":"12.460"},{"v":-0.612295,"d":"-0.612"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G64400.1"]
["Os05t0130600-01","Rice","Conserved hypothetical protein. (Os05t0130600-01)","5",78,{"v":8193.34,"d":"8193.340"},{"v":5.60642,"d":"5.606"},{"v":-0.966667,"d":"-0.967"},"cytosol,plastid,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus"]
["Os05t0134000-01","Rice","Similar to Glycogen synthase kinase. (Os05t0134000-01);Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1). (Os05t0134000-03)","5",379,{"v":43058,"d":"43058.000"},{"v":8.15806,"d":"8.158"},{"v":-0.210026,"d":"-0.210"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus","plastid","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G05840.1"]
["Os05t0134000-03","Rice","Similar to Glycogen synthase kinase. (Os05t0134000-01);Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1). (Os05t0134000-03)","5",411,{"v":46765.7,"d":"46765.700"},{"v":8.45709,"d":"8.457"},{"v":-0.283698,"d":"-0.284"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus","plastid","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G05840.2"]
["Os05t0145400-01","Rice","VIN3-LIKE 3, VERNALIZATION INSENSITIVE 3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1Fibronectin, type III-like fold domain containing protein. (Os05t0145400-01)","5",607,{"v":68017,"d":"68017.000"},{"v":7.14136,"d":"7.141"},{"v":-0.445305,"d":"-0.445"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G24440.2"]
["Os05t0148300-01","Rice","Ribosomal protein S27/S33, mitochondrial domain containing protein. (Os05t0148300-01)","5",104,{"v":11409.2,"d":"11409.200"},{"v":11.8352,"d":"11.835"},{"v":-0.5875,"d":"-0.588"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","mitochondrion",null,null,"AT5G44710.1"]
["Os05t0150300-01","Rice","Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1). (Os05t0150300-01)","5",{"v":1158,"d":"1,158"},{"v":133529,"d":"133529.000"},{"v":4.57288,"d":"4.573"},{"v":-0.944041,"d":"-0.944"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus",null,null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT3G06400.2"]
["Os05t0150733-00","Rice","Similar to pro-resilin. (Os05t0150733-00)","5",195,{"v":18153,"d":"18153.000"},{"v":8.35892,"d":"8.359"},{"v":-0.313846,"d":"-0.314"},"cytosol,plastid,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","plasma membrane,nucleus",null,"mitochondrion",null,null,"nucleus","plastid",null,null,"AT2G36950.1"]
["Os05t0156300-01","Rice","PROTEIN DISULFIDE ISOMERASE-LIKE 2;1, PROTEIN DISULFIDE ISOMERASE-LIKE 2-1, PDI-like protein 2-1Similar to protein disulfide isomerase. (Os05t0156300-01);Similar to Protein disulfide isomerase. (Os05t0156300-02);Similar to Protein disulfide isomerase. (Os05t0156300-03)","5",367,{"v":40056.7,"d":"40056.700"},{"v":7,"d":"7.000"},{"v":-0.29673,"d":"-0.297"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT2G47470.1"]
["Os05t0156300-02","Rice","PROTEIN DISULFIDE ISOMERASE-LIKE 2;1, PROTEIN DISULFIDE ISOMERASE-LIKE 2-1, PDI-like protein 2-1Similar to protein disulfide isomerase. (Os05t0156300-01);Similar to Protein disulfide isomerase. (Os05t0156300-02);Similar to Protein disulfide isomerase. (Os05t0156300-03)","5",366,{"v":39914.6,"d":"39914.600"},{"v":7,"d":"7.000"},{"v":-0.286339,"d":"-0.286"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT2G47470.1"]
["Os05t0156300-03","Rice","PROTEIN DISULFIDE ISOMERASE-LIKE 2;1, PROTEIN DISULFIDE ISOMERASE-LIKE 2-1, PDI-like protein 2-1Similar to protein disulfide isomerase. (Os05t0156300-01);Similar to Protein disulfide isomerase. (Os05t0156300-02);Similar to Protein disulfide isomerase. (Os05t0156300-03)","5",366,{"v":39914.6,"d":"39914.600"},{"v":7,"d":"7.000"},{"v":-0.286339,"d":"-0.286"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:18260611,msms:extracellular:19038476,msms:extracellular:19226311,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT2G47470.1"]
["Os05t0165400-01","Rice","GPI-GlcNAc transferase complex, PIG-H component, conserved domain domain containing protein. (Os05t0165400-01)","5",201,{"v":22850,"d":"22850.000"},{"v":9.0046,"d":"9.005"},{"v":0.0278607,"d":"0.028"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"plasma membrane","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT4G35530.1"]
["Os05t0176500-02","Rice","ATP10 family protein. (Os05t0176500-02)","5",268,{"v":29666.7,"d":"29666.700"},{"v":9.82548,"d":"9.825"},{"v":-0.213433,"d":"-0.213"},"plasma membrane","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G08220.1"]
["Os05t0208050-00","Rice","Hypothetical gene. (Os05t0208050-00)","5",169,{"v":19204.4,"d":"19204.400"},{"v":7.79506,"d":"7.795"},{"v":-0.163314,"d":"-0.163"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT1G03090.2"]
["Os05t0220100-01","Rice","Per1-like family protein. (Os05t0220100-01)","5",349,{"v":39914.3,"d":"39914.300"},{"v":7.51608,"d":"7.516"},{"v":0.156447,"d":"0.156"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G16560.2"]
["Os05t0245700-01","Rice","MICRORNA1425Hypothetical protein. (Os05t0245700-01)","5",78,{"v":8789.92,"d":"8789.920"},{"v":9.35929,"d":"9.359"},{"v":0.447436,"d":"0.447"},"cytosol,extracellular,plastid,nucleus","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","plastid",{"$nulls":3},"cytosol","plasma membrane","plastid","mitochondrion",null,null,"nucleus","extracellular",null,null,"AT5G01720.1"]
["Os05t0301500-01","Rice","OST1ASimilar to Ribophorin I (Fragment). (Os05t0301500-01);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-02);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-03)","5",615,{"v":69525.8,"d":"69525.800"},{"v":7.49073,"d":"7.491"},{"v":-0.193333,"d":"-0.193"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","endoplasmic reticulum","msms:nucleus:19621931,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G76400.1"]
["Os05t0301500-02","Rice","OST1ASimilar to Ribophorin I (Fragment). (Os05t0301500-01);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-02);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-03)","5",352,{"v":39336.2,"d":"39336.200"},{"v":9.21887,"d":"9.219"},{"v":-0.191193,"d":"-0.191"},"endoplasmic reticulum","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","endoplasmic reticulum",null,null,"AT1G76400.1"]
["Os05t0301500-03","Rice","OST1ASimilar to Ribophorin I (Fragment). (Os05t0301500-01);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-02);Similar to dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit. (Os05t0301500-03)","5",211,{"v":24444.7,"d":"24444.700"},{"v":7.50077,"d":"7.501"},{"v":-0.237441,"d":"-0.237"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT1G76400.1"]
["Os05t0310800-01","Rice","Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP). (Os05t0310800-01)","5",524,{"v":57509.7,"d":"57509.700"},{"v":5.43485,"d":"5.435"},{"v":-0.313359,"d":"-0.313"},"plasma membrane,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol","msms:nucleus:19621931,msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G05010.1"]
["Os05t0378900-01","Rice","Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)","5",819,{"v":89881.7,"d":"89881.700"},{"v":8.82195,"d":"8.822"},{"v":-0.0671551,"d":"-0.067"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","cytosol","plastid",null,null,"AT1G67930.1"]
["Os05t0378900-02","Rice","Similar to Golgi transport complex protein-related. (Os05t0378900-01);Similar to predicted protein. (Os05t0378900-02);Non-protein coding transcript. (Os05t0378900-03)","5",368,{"v":41273.1,"d":"41273.100"},{"v":7.9431,"d":"7.943"},{"v":-0.139674,"d":"-0.140"},"cytosol","mitochondrion,nucleus,endoplasmic reticulum,cytosol,plastid","nucleus",null,"endoplasmic reticulum","plastid","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G67930.1"]
["Os05t0392700-01","Rice","Mitochondrial substrate carrier family protein. (Os05t0392700-01);Mitochondrial substrate carrier family protein. (Os05t0392700-03)","5",330,{"v":36122.8,"d":"36122.800"},{"v":10.1054,"d":"10.105"},{"v":-0.020303,"d":"-0.020"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G05290.1"]
["Os05t0392700-03","Rice","Mitochondrial substrate carrier family protein. (Os05t0392700-01);Mitochondrial substrate carrier family protein. (Os05t0392700-03)","5",330,{"v":36122.8,"d":"36122.800"},{"v":10.1054,"d":"10.105"},{"v":-0.020303,"d":"-0.020"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","mitochondrion",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G05290.1"]
["Os05t0435400-01","Rice","Conserved hypothetical protein. (Os05t0435400-01)","5",112,{"v":11795.4,"d":"11795.400"},{"v":8.59592,"d":"8.596"},{"v":0.0955357,"d":"0.096"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","plastid","cytosol","extracellular,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G44414.1"]
["Os05t0437200-01","Rice","Protein of unknown function DUF502 family protein. (Os05t0437200-01);Protein of unknown function DUF502 family protein. (Os05t0437200-02)","5",260,{"v":28992.3,"d":"28992.300"},{"v":7.50251,"d":"7.503"},{"v":0.231538,"d":"0.232"},"cytosol,plasma membrane,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT1G43130.1"]
["Os05t0437200-02","Rice","Protein of unknown function DUF502 family protein. (Os05t0437200-01);Protein of unknown function DUF502 family protein. (Os05t0437200-02)","5",260,{"v":28992.3,"d":"28992.300"},{"v":7.50251,"d":"7.503"},{"v":0.231538,"d":"0.232"},"cytosol,plasma membrane,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT1G43130.1"]
["Os05t0442550-01","Rice","Similar to H0801D08.16 protein. (Os05t0442550-01)","5",77,{"v":8747.7,"d":"8747.700"},{"v":11.4158,"d":"11.416"},{"v":-0.685714,"d":"-0.686"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT4G28360.1"]
["Os05t0464300-01","Rice","Conserved hypothetical protein. (Os05t0464300-01)","5",74,{"v":8283.58,"d":"8283.580"},{"v":10.2875,"d":"10.288"},{"v":-1.07568,"d":"-1.076"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G16740.1"]
["Os05t0471000-01","Rice","Similar to Ser-thr protein kinase (Fragment). (Os05t0471000-01)","5",624,{"v":69583.7,"d":"69583.700"},{"v":5.3178,"d":"5.318"},{"v":-0.173237,"d":"-0.173"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT5G45840.2"]
["Os05t0490800-01","Rice","Similar to Proteasome subunit alpha type. (Os05t0490800-01)","5",249,{"v":27221.5,"d":"27221.500"},{"v":5.97591,"d":"5.976"},{"v":-0.229719,"d":"-0.230"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","cytosol",null,"plastid",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G27020.2"]
["Os05t0494200-01","Rice","ORYZACYSTATIN 2Similar to Cystatin (Fragment). (Os05t0494200-01);Similar to Cysteine proteinase inhibitor-II (Oryzacystatin-II). (Os05t0494200-02)","5",130,{"v":14300.3,"d":"14300.300"},11.088,{"v":-0.212308,"d":"-0.212"},"extracellular","mitochondrion,vacuole,cytosol,plastid","plastid",null,"vacuole","mitochondrion","plastid","plastid",null,"mitochondrion",null,"plastid","plastid","cytosol","msms:extracellular:26072143","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015","AT5G12140.1"]
["Os05t0494200-02","Rice","ORYZACYSTATIN 2Similar to Cystatin (Fragment). (Os05t0494200-01);Similar to Cysteine proteinase inhibitor-II (Oryzacystatin-II). (Os05t0494200-02)","5",151,{"v":16561.7,"d":"16561.700"},{"v":9.16725,"d":"9.167"},{"v":-0.305298,"d":"-0.305"},"plastid","mitochondrion,vacuole,cytosol,plastid","plastid",null,"vacuole","mitochondrion","plastid","plastid",null,"mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT5G12140.1"]
["Os05t0505692-01","Rice","Conserved hypothetical protein. (Os05t0505692-01)","5",76,{"v":8866.82,"d":"8866.820"},{"v":9.94136,"d":"9.941"},{"v":-0.5,"d":"-0.500"},"mitochondrion,cytosol,plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",null,"extracellular","mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",null,"plastid",null,"mitochondrion",null,null,"AT1G06490.2"]
["Os05t0511300-01","Rice","N2227-like domain containing protein. (Os05t0511300-01)","5",494,{"v":56350.2,"d":"56350.200"},{"v":4.75136,"d":"4.751"},{"v":-0.530769,"d":"-0.531"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G32170.1"]
["Os05t0519400-01","Rice","OsSec18, Sec18Homologue of NSF (N-ethylmaleimide sensitive factor), ATPase, Regulation of vacuolar morphology in endosperm cell (Os05t0519400-01);Similar to predicted protein. (Os05t0519400-02);Similar to predicted protein. (Os05t0519400-03)","5",743,{"v":81133.5,"d":"81133.500"},{"v":5.92165,"d":"5.922"},{"v":-0.0978466,"d":"-0.098"},"plasma membrane","mitochondrion,cytosol,endoplasmic reticulum,plastid","cytosol",null,"cytosol","mitochondrion","cytosol","endoplasmic reticulum",null,"mitochondrion",null,"mitochondrion","plastid","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT4G04910.1"]
["Os05t0519400-02","Rice","OsSec18, Sec18Homologue of NSF (N-ethylmaleimide sensitive factor), ATPase, Regulation of vacuolar morphology in endosperm cell (Os05t0519400-01);Similar to predicted protein. (Os05t0519400-02);Similar to predicted protein. (Os05t0519400-03)","5",423,{"v":46430,"d":"46430.000"},{"v":4.89072,"d":"4.891"},{"v":-0.0104019,"d":"-0.010"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum","cytosol",null,"cytosol",null,"cytosol","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G04910.1"]
["Os05t0519400-03","Rice","OsSec18, Sec18Homologue of NSF (N-ethylmaleimide sensitive factor), ATPase, Regulation of vacuolar morphology in endosperm cell (Os05t0519400-01);Similar to predicted protein. (Os05t0519400-02);Similar to predicted protein. (Os05t0519400-03)","5",326,{"v":35582.9,"d":"35582.900"},{"v":4.83072,"d":"4.831"},{"v":0.0496933,"d":"0.050"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum","cytosol",null,"endoplasmic reticulum",null,"cytosol","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G04910.1"]
["Os05t0522600-01","Rice","Leucine-rich repeat, plant specific containing protein. (Os05t0522600-01);Leucine-rich repeat domain containing protein. (Os05t0522600-02)","5",{"v":1014,"d":"1,014"},{"v":108762,"d":"108762.000"},{"v":6.51587,"d":"6.516"},{"v":0.04714,"d":"0.047"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G25930.1"]
["Os05t0522600-02","Rice","Leucine-rich repeat, plant specific containing protein. (Os05t0522600-01);Leucine-rich repeat domain containing protein. (Os05t0522600-02)","5",212,{"v":23027.7,"d":"23027.700"},{"v":4.17553,"d":"4.176"},{"v":0.0542453,"d":"0.054"},"cytosol,peroxisome","mitochondrion,extracellular,nucleus,cytosol,peroxisome,plastid","nucleus",null,null,"plastid","cytosol","extracellular",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT5G25910.1"]
["Os05t0528200-01","Rice","Similar to 50S ribosomal protein L20. (Os05t0528200-01)","5",121,{"v":14122.4,"d":"14122.400"},{"v":11.4938,"d":"11.494"},{"v":-0.687603,"d":"-0.688"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,"mitochondrion",null,"cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT1G16740.1"]
["Os05t0547850-01","Rice","programmed cell death 5DNA-binding TFAR19-related protein family protein. (Os05t0547850-01)","5",128,{"v":14473.2,"d":"14473.200"},{"v":6.55132,"d":"6.551"},{"v":-0.86875,"d":"-0.869"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G29850.1"]
["Os05t0549000-01","Rice","Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)","5",567,{"v":63052,"d":"63052.000"},{"v":5.0362,"d":"5.036"},{"v":-0.41746,"d":"-0.417"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G01600.1"]
["Os05t0549000-02","Rice","Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)","5",567,{"v":63052,"d":"63052.000"},{"v":5.0362,"d":"5.036"},{"v":-0.41746,"d":"-0.417"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G01600.1"]
["Os05t0552300-02","Rice","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1BSimilar to Guanine nucleotide-binding protein beta subunit-like protein (GPB-LR) (RWD). (Os05t0552300-02)","5",336,{"v":36454,"d":"36454.000"},{"v":6.50444,"d":"6.504"},{"v":-0.122321,"d":"-0.122"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"nucleus","cytosol","msms:cytosol:19685898,msms:nucleus:26035336,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015","AT3G18130.1"]
["Os05t0564400-02","Rice","small GTP-binding protein OsRab11C3Similar to GTP-binding protein. (Os05t0564400-02)","5",217,{"v":24087.4,"d":"24087.400"},{"v":5.67963,"d":"5.680"},{"v":-0.268664,"d":"-0.269"},"plasma membrane","mitochondrion,cytosol,vacuole,nucleus","nucleus",null,"vacuole",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT5G60860.1"]
["Os05t0567900-00","Rice","GATA transcription factor 8, GATA factor 8Hypothetical conserved gene. (Os05t0567900-00)","5",250,{"v":25608.1,"d":"25608.100"},{"v":8.18157,"d":"8.182"},{"v":-0.3412,"d":"-0.341"},"cytosol,extracellular,plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT3G50870.1"]
["Os05t0580600-01","Rice","Conserved hypothetical protein. (Os05t0580600-01)","5",127,{"v":13599.1,"d":"13599.100"},{"v":9.12893,"d":"9.129"},{"v":-0.590551,"d":"-0.591"},"plastid","cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G10020.1"]
["Os06t0102700-01","Rice","plant U-box-containing protein 12, U-box protein 12Similar to predicted protein. (Os06t0102700-01)","6",604,{"v":65506.6,"d":"65506.600"},{"v":7.10103,"d":"7.101"},{"v":-0.236755,"d":"-0.237"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G54850.1"]
["Os06t0103200-01","Rice","Transferase family protein. (Os06t0103200-01)","6",461,{"v":49842.6,"d":"49842.600"},{"v":6.71478,"d":"6.715"},{"v":0.0140998,"d":"0.014"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","plastid",null,null,"AT5G42830.1"]
["Os06t0109400-01","Rice","ATPase, AAA-type, core domain containing protein. (Os06t0109400-01)","6",770,{"v":84790.8,"d":"84790.800"},{"v":7.64761,"d":"7.648"},{"v":-0.485584,"d":"-0.486"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G01610.2"]
["Os06t0113900-01","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",585,{"v":62791.2,"d":"62791.200"},{"v":9.5318,"d":"9.532"},{"v":0.445812,"d":"0.446"},"peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT1G72050.4"]
["Os06t0113900-02","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",585,{"v":62791.2,"d":"62791.200"},{"v":9.5318,"d":"9.532"},{"v":0.445812,"d":"0.446"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome","msms:plasma membrane:19502382","19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009","AT1G72050.4"]
["Os06t0113900-03","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",585,{"v":62791.2,"d":"62791.200"},{"v":9.5318,"d":"9.532"},{"v":0.445812,"d":"0.446"},"peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT1G72050.4"]
["Os06t0113900-04","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",331,{"v":35444.2,"d":"35444.200"},{"v":10.2257,"d":"10.226"},{"v":0.717221,"d":"0.717"},"mitochondrion","mitochondrion,peroxisome,plasma membrane,plastid","plastid",null,null,"mitochondrion","peroxisome","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","plastid","plasma membrane"]
["Os06t0113900-05","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",267,{"v":28345.1,"d":"28345.100"},{"v":9.11212,"d":"9.112"},{"v":0.714607,"d":"0.715"},"plasma membrane,peroxisome,plastid","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","plastid",null,null,"plastid","peroxisome","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"plasma membrane",null,null,"AT3G05365.2"]
["Os06t0113900-06","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-01);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-02);Major facilitator superfamily, general substrate transporter domain containing protein. (Os06t0113900-03);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-04);Similar to cDNA clone:J033107D23, full insert sequence. (Os06t0113900-05);Hypothetical conserved gene. (Os06t0113900-06)","6",350,{"v":37407.6,"d":"37407.600"},{"v":10.2251,"d":"10.225"},{"v":0.737429,"d":"0.737"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane","msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT5G45570.1"]
["Os06t0134000-01","Rice","RIBOSOMAL PROTEIN S20Similar to 40S ribosomal protein S20. (Os06t0134000-01)","6",128,{"v":14047.1,"d":"14047.100"},{"v":10.1413,"d":"10.141"},{"v":-0.303125,"d":"-0.303"},"nucleus","mitochondrion,cytosol,plastid","plastid",null,"cytosol",null,"cytosol","mitochondrion","plastid","mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:19621931,msms:cytosol:19685898,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G45030.1"]
["Os06t0151800-01","Rice","Hypothetical protein. (Os06t0151800-01)","6",95,{"v":9798.92,"d":"9798.920"},{"v":11.8656,"d":"11.866"},{"v":0.226316,"d":"0.226"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G11620.6"]
["Os06t0156900-01","Rice","Glycosyl transferase, family 31 protein. (Os06t0156900-01)","6",368,{"v":40522.3,"d":"40522.300"},{"v":8.53676,"d":"8.537"},{"v":-0.164674,"d":"-0.165"},"plastid,golgi","mitochondrion,plastid,golgi","plastid",null,null,"mitochondrion","golgi","plastid","plastid","mitochondrion",null,"plastid","mitochondrion","golgi",null,null,"AT1G53290.1"]
["Os06t0159900-01","Rice","plant U-box-containing protein 63, U-box protein 63Similar to Arm repeat containing protein. (Os06t0159900-01)","6",343,{"v":39346.7,"d":"39346.700"},{"v":6.24534,"d":"6.245"},{"v":-0.673178,"d":"-0.673"},"cytosol,plastid","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G61390.4"]
["Os06t0176000-01","Rice","20S proteasome alpha3 subunitProteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3). (Os06t0176000-01)","6",250,{"v":27045.3,"d":"27045.300"},{"v":6.9331,"d":"6.933"},-0.166,"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G22110.1"]
["Os06t0184400-00","Rice","Similar to predicted protein. (Os06t0184400-00)","6",353,{"v":41069.7,"d":"41069.700"},{"v":5.80145,"d":"5.801"},{"v":-0.12238,"d":"-0.122"},"mitochondrion","mitochondrion,plasma membrane,nucleus,peroxisome,plastid","plastid",null,null,"mitochondrion","mitochondrion","plasma membrane,plastid,nucleus",null,"mitochondrion",null,"mitochondrion","plastid","peroxisome",null,null,"AT2G25050.1"]
["Os06t0184766-00","Rice","Hypothetical conserved gene. (Os06t0184766-00)","6",343,{"v":37376.5,"d":"37376.500"},{"v":5.69688,"d":"5.697"},{"v":0.326822,"d":"0.327"},"plasma membrane,endoplasmic reticulum","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","plastid",null,"plasma membrane","plastid","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT2G07680.1"]
["Os06t0188950-00","Rice","Conserved hypothetical protein. (Os06t0188950-00)","6",27,{"v":3014.72,"d":"3014.720"},4.258,{"v":0.859259,"d":"0.859"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT3G55380.2"]
["Os06t0195900-01","Rice","NOG, C-terminal domain containing protein. (Os06t0195900-01);Similar to predicted protein. (Os06t0195900-02)","6",277,{"v":31696.6,"d":"31696.600"},10.635,{"v":-1.19639,"d":"-1.196"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT1G50920.1"]
["Os06t0195900-02","Rice","NOG, C-terminal domain containing protein. (Os06t0195900-01);Similar to predicted protein. (Os06t0195900-02)","6",255,{"v":29185.6,"d":"29185.600"},{"v":10.7224,"d":"10.722"},{"v":-1.16392,"d":"-1.164"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G50920.1"]
["Os06t0202100-01","Rice","Conserved hypothetical protein. (Os06t0202100-01)","6",281,{"v":28248.7,"d":"28248.700"},{"v":11.8774,"d":"11.877"},{"v":1.02705,"d":"1.027"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","golgi","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT2G43070.3"]
["Os06t0207950-00","Rice","Hypothetical gene. (Os06t0207950-00)","6",71,{"v":8078.04,"d":"8078.040"},{"v":13.0121,"d":"13.012"},{"v":-0.797183,"d":"-0.797"},"mitochondrion,cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","mitochondrion","plastid,nucleus",null,"mitochondrion",null,"plastid","cytosol","nucleus",null,null,"AT2G34000.1"]
["Os06t0220800-01","Rice","adenosine 5'-phosphosulfate reductase-like protein 2Thioredoxin domain 2 containing protein. (Os06t0220800-01)","6",282,{"v":31559,"d":"31559.000"},{"v":9.3899,"d":"9.390"},{"v":-0.107801,"d":"-0.108"},"endoplasmic reticulum","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","endoplasmic reticulum",null,null,"AT1G34780.1"]
["Os06t0232100-01","Rice","Hypothetical conserved gene. (Os06t0232100-01);Protein kinase, core domain containing protein. (Os06t0232100-02);Hypothetical conserved gene. (Os06t0232100-03);Similar to predicted protein. (Os06t0232100-04)","6",370,{"v":40183.6,"d":"40183.600"},{"v":6.25776,"d":"6.258"},{"v":-0.368649,"d":"-0.369"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G18160.1"]
["Os06t0232100-02","Rice","Hypothetical conserved gene. (Os06t0232100-01);Protein kinase, core domain containing protein. (Os06t0232100-02);Hypothetical conserved gene. (Os06t0232100-03);Similar to predicted protein. (Os06t0232100-04)","6",598,{"v":66203.7,"d":"66203.700"},{"v":5.92509,"d":"5.925"},{"v":-0.384281,"d":"-0.384"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid","plastid","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G18160.1"]
["Os06t0232100-03","Rice","Hypothetical conserved gene. (Os06t0232100-01);Protein kinase, core domain containing protein. (Os06t0232100-02);Hypothetical conserved gene. (Os06t0232100-03);Similar to predicted protein. (Os06t0232100-04)","6",315,{"v":34151.8,"d":"34151.800"},4.316,{"v":-0.401587,"d":"-0.402"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G18160.2"]
["Os06t0232100-04","Rice","Hypothetical conserved gene. (Os06t0232100-01);Protein kinase, core domain containing protein. (Os06t0232100-02);Hypothetical conserved gene. (Os06t0232100-03);Similar to predicted protein. (Os06t0232100-04)","6",113,{"v":13050.8,"d":"13050.800"},{"v":5.87724,"d":"5.877"},{"v":-0.419469,"d":"-0.419"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G18160.1"]
["Os06t0251100-00","Rice","Membrane attack complex component/perforin (MACPF) domain domain containing protein. (Os06t0251100-00)","6",632,{"v":67907,"d":"67907.000"},{"v":9.4184,"d":"9.418"},{"v":-0.0738924,"d":"-0.074"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT1G14780.1"]
["Os06t0274500-01","Rice","SERK-like gene 2, Somatic Embryogenesis Protein Kinase 1, bri1-associated receptor kinase 1 (BAK1) homologue 7Similar to SERK1 (Fragment). (Os06t0274500-01)","6",640,{"v":69313,"d":"69313.000"},{"v":6.65422,"d":"6.654"},{"v":-0.0764062,"d":"-0.076"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","plasma membrane","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT5G16000.1"]
["Os06t0275000-01","Rice","PHOTOSENSITIVITY 1Zinc finger protein, Heading date (Os06t0275000-01)","6",395,{"v":43077.7,"d":"43077.700"},{"v":4.59137,"d":"4.591"},{"v":-0.541772,"d":"-0.542"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plastid","nucleus","msms:mitochondrion:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT3G02380.1"]
["Os06t0343100-01","Rice","Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8). (Os06t0343100-01);Similar to predicted protein. (Os06t0343100-02)","6",{"v":1084,"d":"1,084"},{"v":121412,"d":"121412.000"},{"v":6.83348,"d":"6.833"},{"v":-0.411531,"d":"-0.412"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","nucleus",null,null,"AT3G26560.1"]
["Os06t0343100-02","Rice","Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8). (Os06t0343100-01);Similar to predicted protein. (Os06t0343100-02)","6",298,{"v":34591.7,"d":"34591.700"},{"v":9.6398,"d":"9.640"},{"v":-0.513423,"d":"-0.513"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G32490.1"]
["Os06t0354700-01","Rice","NON-YELLOW COLORING 3Alpha/beta hydrolase-fold family protein, Chlorophyll degradation during senescence (Os06t0354700-01);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-02);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-03)","6",486,{"v":53907.3,"d":"53907.300"},{"v":6.94624,"d":"6.946"},{"v":-0.197531,"d":"-0.198"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G13800.3"]
["Os06t0354700-02","Rice","NON-YELLOW COLORING 3Alpha/beta hydrolase-fold family protein, Chlorophyll degradation during senescence (Os06t0354700-01);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-02);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-03)","6",426,{"v":47041.1,"d":"47041.100"},{"v":6.58288,"d":"6.583"},{"v":-0.194601,"d":"-0.195"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G13800.3"]
["Os06t0354700-03","Rice","NON-YELLOW COLORING 3Alpha/beta hydrolase-fold family protein, Chlorophyll degradation during senescence (Os06t0354700-01);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-02);Similar to Hydrolase, alpha/beta fold family protein. (Os06t0354700-03)","6",36,{"v":4113.08,"d":"4113.080"},{"v":12.9921,"d":"12.992"},{"v":-0.291667,"d":"-0.292"},"mitochondrion","mitochondrion,peroxisome,plastid","plastid",null,null,"mitochondrion","mitochondrion","peroxisome,plastid",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT5G13800.1"]
["Os06t0523300-01","Rice","Conserved hypothetical protein. (Os06t0523300-01)","6",98,{"v":10597.6,"d":"10597.600"},{"v":7.18015,"d":"7.180"},{"v":-0.405102,"d":"-0.405"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","mitochondrion,plastid,nucleus","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT5G41761.1"]
["Os06t0542100-01","Rice","Conserved hypothetical protein. (Os06t0542100-01)","6",118,{"v":12656.2,"d":"12656.200"},10.966,{"v":-0.119492,"d":"-0.119"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G32790.2"]
["Os06t0551400-01","Rice","ras-related small GTP-binding protein ric2Ras-related small GTP-binding protein, Regulation of vesicular trafficking from trans-Golgi network to plasma membrane or vacuole, Jasmonic acid (JA)-mediated defense signaling (Os06t0551400-01)","6",217,{"v":23924.1,"d":"23924.100"},{"v":5.41944,"d":"5.419"},{"v":-0.326267,"d":"-0.326"},"cytosol,plasma membrane,plastid,golgi","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT4G18800.1"]
["Os06t0567000-01","Rice","Uncharacterised protein family UPF0197 domain containing protein. (Os06t0567000-01)","6",76,{"v":8080.98,"d":"8080.980"},{"v":9.73514,"d":"9.735"},{"v":0.967105,"d":"0.967"},"plasma membrane,endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT4G29735.1"]
["Os06t0622800-01","Rice","Armadillo-type fold domain containing protein. (Os06t0622800-01)","6",681,{"v":77343.3,"d":"77343.300"},{"v":5.01793,"d":"5.018"},{"v":0.0515418,"d":"0.052"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"vacuole","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT4G38200.2"]
["Os06t0624900-01","Rice","Similar to zinc-binding family protein. (Os06t0624900-01);Similar to predicted protein. (Os06t0624900-02);Similar to zinc-binding family protein. (Os06t0624900-03)","6",253,{"v":27618.8,"d":"27618.800"},{"v":8.55289,"d":"8.553"},{"v":-0.45415,"d":"-0.454"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21000.2"]
["Os06t0624900-02","Rice","Similar to zinc-binding family protein. (Os06t0624900-01);Similar to predicted protein. (Os06t0624900-02);Similar to zinc-binding family protein. (Os06t0624900-03)","6",251,{"v":27391.6,"d":"27391.600"},{"v":8.55289,"d":"8.553"},{"v":-0.460558,"d":"-0.461"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21000.2"]
["Os06t0624900-03","Rice","Similar to zinc-binding family protein. (Os06t0624900-01);Similar to predicted protein. (Os06t0624900-02);Similar to zinc-binding family protein. (Os06t0624900-03)","6",253,{"v":27618.8,"d":"27618.800"},{"v":8.55289,"d":"8.553"},{"v":-0.45415,"d":"-0.454"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21000.2"]
["Os06t0644100-01","Rice","Carbohydrate-binding-like fold domain containing protein. (Os06t0644100-01)","6",205,{"v":22345.5,"d":"22345.500"},{"v":9.93888,"d":"9.939"},{"v":0.119024,"d":"0.119"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:nucleus:19621931,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G25310.1"]
["Os06t0652200-01","Rice","Similar to Hemolysin-III related family protein. (Os06t0652200-01)","6",227,{"v":24118.7,"d":"24118.700"},{"v":9.18887,"d":"9.189"},{"v":0.728634,"d":"0.729"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"golgi","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT4G30850.1"]
["Os06t0659100-00","Rice","RICE SQUAMOSA PROMOTER-BINDING-LIKE 10Similar to Squamosa-promoter binding protein 1. (Os06t0659100-00)","6",426,{"v":44294.6,"d":"44294.600"},{"v":9.12992,"d":"9.130"},{"v":-0.384977,"d":"-0.385"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G02065.1"]
["Os06t0667100-01","Rice","HAP5B SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nuclear Y/CCAAT-box binding factor C subunit NF-YC. (Os06t0667100-01)","6",250,{"v":27838.8,"d":"27838.800"},{"v":4.69199,"d":"4.692"},{"v":-0.5732,"d":"-0.573"},"cytosol,plastid,nucleus","cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","cytosol,nucleus",null,"plastid",null,null,"plastid","nucleus",null,null,"AT1G56170.1"]
["Os06t0687700-01","Rice","Similar to T-complex protein 1, eta subunit (TCP-1-eta) (CCT-eta) (HIV-1 Nef interacting protein). (Os06t0687700-01)","6",302,{"v":32375.4,"d":"32375.400"},{"v":6.29353,"d":"6.294"},{"v":-0.146026,"d":"-0.146"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:18260611,msms:nucleus:19621931,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT3G11830.1"]
["Os06t0698600-01","Rice","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN G2Exo70 exocyst complex subunit family protein. (Os06t0698600-01)","6",663,{"v":73642.8,"d":"73642.800"},{"v":8.45588,"d":"8.456"},{"v":-0.115535,"d":"-0.116"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","cytosol,plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G31540.1"]
["Os06t0702700-01","Rice","Butirosin biosynthesis, BtrG-like domain containing protein. (Os06t0702700-01)","6",190,{"v":21212.2,"d":"21212.200"},{"v":4.42458,"d":"4.425"},{"v":-0.235263,"d":"-0.235"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","mitochondrion",null,"mitochondrion",null,null,"cytosol","plastid",null,null,"AT2G24390.1"]
["Os06t0708500-01","Rice","CYCLOPHILIN 20-1Similar to Peptidyl-prolyl cis-trans isomerase. (Os06t0708500-01);Similar to Peptidyl-prolyl cis-trans isomerase. (Os06t0708500-02)","6",225,{"v":24069.3,"d":"24069.300"},{"v":10.3577,"d":"10.358"},{"v":-0.0564444,"d":"-0.056"},"plasma membrane,plastid","mitochondrion,cytosol,endoplasmic reticulum,plastid","plastid",null,"endoplasmic reticulum","mitochondrion","endoplasmic reticulum","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:plasma membrane:18260611,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT5G58710.1"]
["Os06t0708500-02","Rice","CYCLOPHILIN 20-1Similar to Peptidyl-prolyl cis-trans isomerase. (Os06t0708500-01);Similar to Peptidyl-prolyl cis-trans isomerase. (Os06t0708500-02)","6",220,{"v":23493.5,"d":"23493.500"},{"v":10.3577,"d":"10.358"},{"v":-0.117273,"d":"-0.117"},"plasma membrane,plastid","mitochondrion,cytosol,endoplasmic reticulum,plastid","plastid",null,"endoplasmic reticulum","mitochondrion","endoplasmic reticulum","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G58710.1"]
["Os06t0716700-01","Rice","RICE 90KDA HEAT SHOCK PROTEINSimilar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)","6",498,{"v":56878,"d":"56878.000"},{"v":4.55548,"d":"4.555"},{"v":-0.595582,"d":"-0.596"},"endoplasmic reticulum","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","mitochondrion,endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","endoplasmic reticulum",null,null,"AT4G24190.1"]
["Os06t0716700-02","Rice","RICE 90KDA HEAT SHOCK PROTEINSimilar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)","6",812,{"v":93049.5,"d":"93049.500"},{"v":4.61039,"d":"4.610"},{"v":-0.703079,"d":"-0.703"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","mitochondrion,endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","msms:plasma membrane:18260611,msms:plasma membrane:19502382,msms:plastid:21433289,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT4G24190.1"]
["Os06t0716700-03","Rice","RICE 90KDA HEAT SHOCK PROTEINSimilar to Heat shock protein 90. (Os06t0716700-01);Similar to Heat shock protein 90. (Os06t0716700-02);Similar to Heat shock protein 90. (Os06t0716700-03)","6",612,{"v":71067.8,"d":"71067.800"},{"v":4.54616,"d":"4.546"},{"v":-0.872549,"d":"-0.873"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"endoplasmic reticulum",null,"cytosol","mitochondrion,endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol",null,null,"AT4G24190.2"]
["Os06t0720000-01","Rice","Conserved hypothetical protein. (Os06t0720000-01);Conserved hypothetical protein. (Os06t0720000-02);Similar to H0124E07.1 protein. (Os06t0720000-03)","6",111,{"v":11400.4,"d":"11400.400"},{"v":10.6568,"d":"10.657"},{"v":-0.506306,"d":"-0.506"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G71850.1"]
["Os06t0720000-02","Rice","Conserved hypothetical protein. (Os06t0720000-01);Conserved hypothetical protein. (Os06t0720000-02);Similar to H0124E07.1 protein. (Os06t0720000-03)","6",147,{"v":15459.1,"d":"15459.100"},12.084,{"v":-0.777551,"d":"-0.778"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G71850.1"]
["Os06t0720000-03","Rice","Conserved hypothetical protein. (Os06t0720000-01);Conserved hypothetical protein. (Os06t0720000-02);Similar to H0124E07.1 protein. (Os06t0720000-03)","6",103,{"v":11253.3,"d":"11253.300"},{"v":12.2827,"d":"12.283"},{"v":-0.813592,"d":"-0.814"},"mitochondrion","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G01840.1"]
["Os06t0724600-01","Rice","Similar to Transformer-SR ribonucleoprotein (Fragment). (Os06t0724600-01);Similar to transformer-2 protein. (Os06t0724600-02)","6",164,{"v":18504.9,"d":"18504.900"},{"v":10.8562,"d":"10.856"},{"v":-0.861585,"d":"-0.862"},"nucleus","plastid,nucleus","nucleus",null,null,"plastid","nucleus","plastid,nucleus",null,"plastid",null,"plastid","nucleus","nucleus","msms:nucleus:19621931,msms:nucleus:26035336","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G35785.1"]
["Os06t0724600-02","Rice","Similar to Transformer-SR ribonucleoprotein (Fragment). (Os06t0724600-01);Similar to transformer-2 protein. (Os06t0724600-02)","6",273,{"v":31586.5,"d":"31586.500"},{"v":10.8471,"d":"10.847"},{"v":-1.53956,"d":"-1.540"},"nucleus","plastid,nucleus","plastid",null,null,"plastid","nucleus","plastid,nucleus",null,"plastid",null,"plastid","nucleus","nucleus","msms:nucleus:23303719","23303719:Qi:Q:He,Lei:L:Chen,Yu:Y:Xu,Weichang:W:Yu:2013","AT4G35785.2"]
["Os06t0731750-00","Rice","Hypothetical gene. (Os06t0731750-00)","6",70,{"v":6226.46,"d":"6226.460"},{"v":3.84994,"d":"3.850"},{"v":1.17429,"d":"1.174"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G25540.1"]
["Os06t0731800-01","Rice","Clathrin light chain family protein. (Os06t0731800-01)","6",291,{"v":31292,"d":"31292.000"},{"v":7.86931,"d":"7.869"},{"v":-0.736082,"d":"-0.736"},"plasma membrane,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G40060.1"]
["Os07t0108800-01","Rice","TWO-PORE K+ CHANNEL BTwo-pore K+ channel family protein, K+ homeostasis, Osmotic and drought tolerance (Os07t0108800-01)","7",349,{"v":37916.5,"d":"37916.500"},{"v":6.25658,"d":"6.257"},{"v":0.0713467,"d":"0.071"},"vacuole","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",null,"cytosol",null,"golgi","plasma membrane,vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome","gfp:vacuole:21224427","21224427:Stanislav:S:Isayenkov,Jean-Charles:JC:Isner,Frans J M:FJ:Maathuis:2011","AT5G55630.2"]
["Os07t0114000-01","Rice","protein phosphatase 2C61, protein phosphatase 2C 61, protein phosphatase 93Similar to Protein phosphatase 2C-like. (Os07t0114000-01)","7",377,{"v":40618.2,"d":"40618.200"},{"v":8.23959,"d":"8.240"},{"v":-0.144297,"d":"-0.144"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G17090.1"]
["Os07t0129100-00","Rice","Conserved hypothetical protein. (Os07t0129100-00)","7",87,{"v":8754.83,"d":"8754.830"},{"v":11.7278,"d":"11.728"},{"v":-0.917241,"d":"-0.917"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","plasma membrane",null,"mitochondrion",null,"mitochondrion",null,"cytosol"]
["Os07t0158900-01","Rice","F-box protein 341Cyclin-like F-box domain containing protein. (Os07t0158900-01);Hypothetical conserved gene. (Os07t0158900-02)","7",496,{"v":57035.8,"d":"57035.800"},{"v":8.60098,"d":"8.601"},{"v":-0.145968,"d":"-0.146"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G13570.2"]
["Os07t0158900-02","Rice","F-box protein 341Cyclin-like F-box domain containing protein. (Os07t0158900-01);Hypothetical conserved gene. (Os07t0158900-02)","7",346,{"v":39543.7,"d":"39543.700"},{"v":7.29392,"d":"7.294"},{"v":-0.0413295,"d":"-0.041"},"cytosol,golgi","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"nucleus","mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"golgi",null,null,"AT3G03360.1"]
["Os07t0197100-01","Rice","HEXOKINASE-4Similar to Hexokinase-4, chloroplastic. (Os07t0197100-01)","7",218,{"v":23921.6,"d":"23921.600"},{"v":5.39814,"d":"5.398"},{"v":-0.209633,"d":"-0.210"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G47840.1"]
["Os07t0233300-01","Rice","Similar to Nucleic acid binding protein-like. (Os07t0233300-01);Similar to PHD finger protein. (Os07t0233300-02);Similar to cDNA clone:J033048B22, full insert sequence. (Os07t0233300-03)","7",244,{"v":27406.1,"d":"27406.100"},{"v":6.83617,"d":"6.836"},{"v":-0.656967,"d":"-0.657"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT3G11200.1"]
["Os07t0233300-02","Rice","Similar to Nucleic acid binding protein-like. (Os07t0233300-01);Similar to PHD finger protein. (Os07t0233300-02);Similar to cDNA clone:J033048B22, full insert sequence. (Os07t0233300-03)","7",173,{"v":19354.3,"d":"19354.300"},{"v":4.97786,"d":"4.978"},{"v":0.13237,"d":"0.132"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"extracellular",null,"cytosol","plasma membrane,plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G14510.1"]
["Os07t0233300-03","Rice","Similar to Nucleic acid binding protein-like. (Os07t0233300-01);Similar to PHD finger protein. (Os07t0233300-02);Similar to cDNA clone:J033048B22, full insert sequence. (Os07t0233300-03)","7",80,{"v":9110.54,"d":"9110.540"},{"v":6.8842,"d":"6.884"},{"v":-0.93,"d":"-0.930"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G11200.1"]
["Os07t0246200-01","Rice","calreticulin 1, calreticulinSimilar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)","7",424,{"v":48311.1,"d":"48311.100"},{"v":4.22603,"d":"4.226"},{"v":-1.04009,"d":"-1.040"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT1G56340.2"]
["Os07t0246200-02","Rice","calreticulin 1, calreticulinSimilar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)","7",424,{"v":48311.1,"d":"48311.100"},{"v":4.22603,"d":"4.226"},{"v":-1.04009,"d":"-1.040"},"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:mitochondrion:15069638,msms:plasma membrane:18260611,msms:plastid:21433289,msms:plastid:27992503","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G56340.2"]
["Os07t0246200-03","Rice","calreticulin 1, calreticulinSimilar to Calreticulin (Fragment). (Os07t0246200-01);Similar to Calreticulin (Fragment). (Os07t0246200-02);Similar to calreticulin2. (Os07t0246200-03)","7",429,{"v":48773.7,"d":"48773.700"},{"v":4.24943,"d":"4.249"},{"v":-1.00956,"d":"-1.010"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:mitochondrion:15069638,msms:cytosol:19685898,msms:plastid:21433289,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,28056797:Ning:N:Yang,Tai:T:Wang:2017,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G56340.2"]
["Os07t0262200-02","Rice","Similar to Prohibitin. (Os07t0262200-02)","7",289,{"v":31956.7,"d":"31956.700"},{"v":10.3771,"d":"10.377"},{"v":-0.174394,"d":"-0.174"},"mitochondrion,plasma membrane,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","mitochondrion",null,"mitochondrion",null,null,"plastid","mitochondrion","msms:mitochondrion:19010998,msms:nucleus:19621931,msms:plastid:21433289,msms:mitochondrion:23027867,msms:nucleus:26035336,msms:extracellular:26194822,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,28056797:Ning:N:Yang,Tai:T:Wang:2017,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015","AT1G03860.1"]
["Os07t0291100-01","Rice","Transport protein particle (TRAPP) component domain containing protein. (Os07t0291100-01);Similar to cDNA clone:J013066M10, full insert sequence. (Os07t0291100-02)","7",175,{"v":19516.4,"d":"19516.400"},{"v":6.49897,"d":"6.499"},{"v":-0.0725714,"d":"-0.073"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol,plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G05000.1"]
["Os07t0291100-02","Rice","Transport protein particle (TRAPP) component domain containing protein. (Os07t0291100-01);Similar to cDNA clone:J013066M10, full insert sequence. (Os07t0291100-02)","7",132,{"v":15047.1,"d":"15047.100"},{"v":8.33689,"d":"8.337"},{"v":-0.155303,"d":"-0.155"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"mitochondrion",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G05000.1"]
["Os07t0509200-01","Rice","HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 14Similar to Potassium transporter 7 (AtPOT7) (AtHAK7). (Os07t0509200-01)","7",434,{"v":48604.2,"d":"48604.200"},{"v":8.18582,"d":"8.186"},{"v":0.415668,"d":"0.416"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane,vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G09400.1"]
["Os07t0511500-01","Rice","Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0511500-01);Similar to chromatin remodeling complex subunit. (Os07t0511500-02)","7",635,{"v":72525.8,"d":"72525.800"},{"v":9.19836,"d":"9.198"},{"v":-0.509449,"d":"-0.509"},"mitochondrion,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G05120.1"]
["Os07t0511500-02","Rice","Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0511500-01);Similar to chromatin remodeling complex subunit. (Os07t0511500-02)","7",111,{"v":12738.4,"d":"12738.400"},{"v":6.52371,"d":"6.524"},{"v":-0.193694,"d":"-0.194"},"extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,null,"AT1G02670.6"]
["Os07t0541500-01","Rice","CRK10Similar to KI domain interacting kinase 1. (Os07t0541500-01)","7",645,{"v":70481.7,"d":"70481.700"},{"v":7.23457,"d":"7.235"},{"v":0.0142636,"d":"0.014"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:extracellular:19226311,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT4G05200.1"]
["Os07t0542400-01","Rice","Similar to Receptor protein kinase. (Os07t0542400-01);Similar to receptor-like protein kinase RK20-1. (Os07t0542400-02)","7",633,{"v":69021.7,"d":"69021.700"},{"v":6.59271,"d":"6.593"},{"v":-0.0178515,"d":"-0.018"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G05200.1"]
["Os07t0542400-02","Rice","Similar to Receptor protein kinase. (Os07t0542400-01);Similar to receptor-like protein kinase RK20-1. (Os07t0542400-02)","7",430,{"v":47747.6,"d":"47747.600"},{"v":6.51427,"d":"6.514"},{"v":-0.0706977,"d":"-0.071"},"plasma membrane,plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,"nucleus","mitochondrion","plasma membrane","cytosol,plasma membrane,nucleus",null,"mitochondrion",{"$nulls":3},"plastid",null,null,"AT4G05200.1"]
["Os07t0564150-00","Rice","Hypothetical gene. (Os07t0564150-00)","7",469,{"v":52768.7,"d":"52768.700"},{"v":11.7456,"d":"11.746"},{"v":-0.983156,"d":"-0.983"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion,plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus"]
["Os07t0564700-01","Rice","Similar to ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7); guanyl-nucleotide exchange factor/ protein binding. (Os07t0564700-01)","7",344,{"v":37859.9,"d":"37859.900"},{"v":5.41335,"d":"5.413"},{"v":-0.509302,"d":"-0.509"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT3G43300.3"]
["Os07t0568600-01","Rice","CALCIUM-DEPENDENT PROTEIN KINASE 20Similar to Calcium-dependent protein kinase. (Os07t0568600-01);Similar to calcium-dependent protein kinase, isoform AK1. (Os07t0568600-02)","7",550,{"v":62411.6,"d":"62411.600"},{"v":7.46039,"d":"7.460"},{"v":-0.564727,"d":"-0.565"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G19450.2"]
["Os07t0568600-02","Rice","CALCIUM-DEPENDENT PROTEIN KINASE 20Similar to Calcium-dependent protein kinase. (Os07t0568600-01);Similar to calcium-dependent protein kinase, isoform AK1. (Os07t0568600-02)","7",386,{"v":43756.4,"d":"43756.400"},{"v":6.58169,"d":"6.582"},{"v":-0.35829,"d":"-0.358"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G12480.2"]
["Os07t0569000-01","Rice","Conserved hypothetical protein. (Os07t0569000-01)","7",{"v":1099,"d":"1,099"},{"v":118618,"d":"118618.000"},{"v":4.15618,"d":"4.156"},{"v":-0.53485,"d":"-0.535"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G47940.1"]
["Os07t0572500-01","Rice","Conserved hypothetical protein. (Os07t0572500-01)","7",103,{"v":11179.3,"d":"11179.300"},{"v":12.1917,"d":"12.192"},{"v":-1.14951,"d":"-1.150"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","plastid","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT2G46340.1"]
["Os07t0573600-01","Rice","required for excision 1-SNucleotide excision repair, TFIIH, subunit TTDA domain containing protein. (Os07t0573600-01)","7",131,{"v":14849.9,"d":"14849.900"},{"v":10.2341,"d":"10.234"},{"v":-0.485496,"d":"-0.485"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT1G12400.2"]
["Os07t0603500-00","Rice","Peptidase A1 domain containing protein. (Os07t0603500-00)","7",309,{"v":33791.1,"d":"33791.100"},{"v":11.8897,"d":"11.890"},{"v":-0.869903,"d":"-0.870"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G31450.1"]
["Os07t0603800-01","Rice","PROTEIN TRANSPORTER 4TGF-beta receptor, type I/II extracellular region family protein. (Os07t0603800-01);Similar to peptide transporter PTR2. (Os07t0603800-02)","7",577,{"v":63454.2,"d":"63454.200"},{"v":7.16315,"d":"7.163"},{"v":0.405026,"d":"0.405"},"plasma membrane,cytosol,peroxisome","mitochondrion,plasma membrane,extracellular,nucleus,cytosol,vacuole,peroxisome","nucleus",null,"extracellular",null,"cytosol","vacuole",null,"mitochondrion",null,null,"plasma membrane","peroxisome",null,null,"AT1G62200.1"]
["Os07t0603800-02","Rice","PROTEIN TRANSPORTER 4TGF-beta receptor, type I/II extracellular region family protein. (Os07t0603800-01);Similar to peptide transporter PTR2. (Os07t0603800-02)","7",288,{"v":32360.7,"d":"32360.700"},{"v":8.4656,"d":"8.466"},{"v":0.385069,"d":"0.385"},"peroxisome,vacuole","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","plastid",null,"extracellular",null,"peroxisome","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"vacuole",null,null,"AT2G02040.1"]
["Os07t0620500-01","Rice","Oligosaccaryltransferase domain containing protein. (Os07t0620500-01)","7",52,{"v":5970.27,"d":"5970.270"},{"v":3.66145,"d":"3.661"},{"v":0.744231,"d":"0.744"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","plasma membrane",null,null,"AT3G09455.2"]
["Os07t0636900-01","Rice","Asp/Glu racemase, active site domain containing protein. (Os07t0636900-01)","7",352,{"v":40216.6,"d":"40216.600"},{"v":7.21605,"d":"7.216"},{"v":-0.324432,"d":"-0.324"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G29760.1"]
["Os07t0647900-01","Rice","RNA helicase 57DEAD-like helicase, N-terminal domain containing protein. (Os07t0647900-01)","7",540,{"v":60113.5,"d":"60113.500"},{"v":9.98465,"d":"9.985"},{"v":-0.386667,"d":"-0.387"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol","msms:nucleus:23303719","23303719:Qi:Q:He,Lei:L:Chen,Yu:Y:Xu,Weichang:W:Yu:2013","AT3G09720.1"]
["Os07t0657200-01","Rice","OsWD40-148WD40/YVTN repeat-like domain containing protein. (Os07t0657200-01);WD40/YVTN repeat-like domain containing protein. (Os07t0657200-02);Similar to Sec31p. (Os07t0657200-03);Similar to Sec31p. (Os07t0657200-04)","7",{"v":1127,"d":"1,127"},{"v":121753,"d":"121753.000"},{"v":4.98904,"d":"4.989"},{"v":-0.299468,"d":"-0.299"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","cytosol",null,null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","cytosol","msms:nucleus:15276429,msms:plastid:21433289,msms:plastid:27992503,msms:plasma membrane:28056797","15276429:Md Monowar Karim:MM:Khan,Setsuko:S:Komatsu:2004,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G63460.1"]
["Os07t0657200-02","Rice","OsWD40-148WD40/YVTN repeat-like domain containing protein. (Os07t0657200-01);WD40/YVTN repeat-like domain containing protein. (Os07t0657200-02);Similar to Sec31p. (Os07t0657200-03);Similar to Sec31p. (Os07t0657200-04)","7",{"v":1127,"d":"1,127"},{"v":121753,"d":"121753.000"},{"v":4.98904,"d":"4.989"},{"v":-0.299468,"d":"-0.299"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","cytosol",null,null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","cytosol",null,null,"AT3G63460.1"]
["Os07t0673900-01","Rice","Hypoxia-Induced Gene Domain 2Hypoxia induced protein, Early stage of hypoxia signalling (Os07t0673900-01)","7",101,{"v":11270.5,"d":"11270.500"},{"v":10.1023,"d":"10.102"},{"v":-0.368317,"d":"-0.368"},"cytosol","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane,peroxisome,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G27760.1"]
["Os07t0678600-02","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 2Similar to Serine/threonine protein kinase. (Os07t0678600-01);Similar to cDNA clone:J023141O10, full insert sequence. (Os07t0678600-02);Similar to cDNA clone:J023141O10, full insert sequence. (Os07t0678600-03)","7",361,{"v":40796.7,"d":"40796.700"},{"v":9.61593,"d":"9.616"},{"v":-0.312742,"d":"-0.313"},"cytosol","mitochondrion,cytosol,nucleus","cytosol",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G01810.1"]
["Os07t0690900-01","Rice","Glycosyl-phosphatidyl inositol-anchored, plant domain containing protein. (Os07t0690900-01)","7",675,{"v":72554.9,"d":"72554.900"},{"v":6.3897,"d":"6.390"},{"v":0.00977778,"d":"0.010"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G16120.1"]
["Os07t0694700-01","Rice","L-ASCORBATE PEROXIDASE 2L-ascorbate peroxidase. (Os07t0694700-01)","7",251,{"v":27119,"d":"27119.000"},{"v":5.01187,"d":"5.012"},{"v":-0.325896,"d":"-0.326"},"extracellular","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,"plastid",null,"cytosol","peroxisome",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:18372294,msms:extracellular:26072143,msms:plasma membrane:27800704,msms:extracellular:28232208","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G07890.2"]
["Os08t0126300-01","Rice","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, CYTOSOLICSimilar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment). (Os08t0126300-01);Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment). (Os08t0126300-02);Similar to cDNA clone:J023080G06, full insert sequence. (Os08t0126300-03)","8",337,{"v":36414.6,"d":"36414.600"},{"v":7.12908,"d":"7.129"},{"v":-0.0620178,"d":"-0.062"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","mitochondrion,cytosol","mitochondrion","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G04120.1"]
["Os08t0126300-02","Rice","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, CYTOSOLICSimilar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment). (Os08t0126300-01);Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment). (Os08t0126300-02);Similar to cDNA clone:J023080G06, full insert sequence. (Os08t0126300-03)","8",337,{"v":36414.6,"d":"36414.600"},{"v":7.12908,"d":"7.129"},{"v":-0.0620178,"d":"-0.062"},"extracellular","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","mitochondrion,cytosol","mitochondrion","mitochondrion",null,null,"cytosol","cytosol","msms:plastid:17189339,msms:plasma membrane:18260611,msms:extracellular:18372294,msms:plasma membrane:18557835,msms:extracellular:21255809,msms:plastid:21433289,msms:extracellular:23159799,msms:extracellular:25047395,msms:golgi:25047511,msms:plastid:27126603,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,21255809:T:T:Shinano,S:S:Komatsu,T:T:Yoshimura,S:S:Tokutake,F-J:FJ:Kong,T:T:Watanabe,J:J:Wasaki,M:M:Osaki:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,27126603:Yangyang:Y:Wang,Kuixian:K:Ji,Shihua:S:Shen,Hui:H:Chen:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G04120.1"]
["Os08t0139000-01","Rice","Similar to nucleolin. (Os08t0139000-01);Similar to RNA-binding glycine rich protein (RGP-2). (Os08t0139000-02)","8",111,{"v":11939.4,"d":"11939.400"},{"v":10.0347,"d":"10.035"},{"v":-0.0306306,"d":"-0.031"},"mitochondrion","mitochondrion,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","mitochondrion","mitochondrion",null,null,"AT5G54580.1"]
["Os08t0176900-02","Rice","b-ZIP TRANSCRIPTION FACTOR 64Similar to Transcription factor HBP-1b(C38) (Fragment). (Os08t0176900-01);Hypothetical conserved gene. (Os08t0176900-02)","8",157,{"v":17264.4,"d":"17264.400"},{"v":10.5197,"d":"10.520"},{"v":-0.717197,"d":"-0.717"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus","plastid","mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT5G10030.1"]
["Os08t0280200-01","Rice","Tensin phosphatase, C2 domain domain containing protein. (Os08t0280200-01);Similar to Formin-like protein 6. (Os08t0280200-02);Hypothetical conserved gene. (Os08t0280200-03)","8",481,{"v":56441.6,"d":"56441.600"},{"v":7.85069,"d":"7.851"},{"v":0.00873181,"d":"0.009"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT5G07740.3"]
["Os08t0345700-01","Rice","pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-01);Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-02)","8",617,{"v":67158.2,"d":"67158.200"},{"v":7.16854,"d":"7.169"},{"v":-0.0223663,"d":"-0.022"},"extracellular","mitochondrion,cytosol,extracellular","cytosol",null,"extracellular","mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:25047395,msms:extracellular:26194822,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015","AT1G76550.1"]
["Os08t0366000-02","Rice","phosphoenolpyruvate carboxylase, phosphoenolpyruvate carboxylase 2a, PEPCase 2aPhosphoenolpyruvate carboxylase. (Os08t0366000-01);Phosphoenolpyruvate carboxylase. (Os08t0366000-02);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-03);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-04)","8",964,{"v":110062,"d":"110062.000"},{"v":5.54794,"d":"5.548"},{"v":-0.353527,"d":"-0.354"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G53310.3"]
["Os08t0384500-01","Rice","PLEIOTROPIC DRUG RESISTANCE 17ABC transporter-like domain containing protein. (Os08t0384500-01)","8",763,{"v":85797.8,"d":"85797.800"},{"v":8.59038,"d":"8.590"},{"v":0.127916,"d":"0.128"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G15520.1"]
["Os08t0416800-01","Rice","Conserved hypothetical protein. (Os08t0416800-01)","8",105,{"v":11553.3,"d":"11553.300"},{"v":11.1592,"d":"11.159"},{"v":-0.340952,"d":"-0.341"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","plastid","nucleus",null,"plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,null,"AT3G19660.1"]
["Os08t0431800-01","Rice","Conserved hypothetical protein. (Os08t0431800-01)","8",84,{"v":9216.13,"d":"9216.130"},{"v":9.82719,"d":"9.827"},{"v":-0.446429,"d":"-0.446"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT1G57565.1"]
["Os08t0440300-04","Rice","CCR4-associated factor 1A, carbon cataboliterepressor 4-associated factor 1A, CCR4-associated factor 1-12Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os08t0440300-01);Ribonuclease CAF1 family protein. (Os08t0440300-03);Ribonuclease CAF1 family protein. (Os08t0440300-04)","8",93,{"v":10402.7,"d":"10402.700"},{"v":8.47954,"d":"8.480"},{"v":-0.148387,"d":"-0.148"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","nucleus","nucleus",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT5G10960.1"]
["Os08t0461300-01","Rice","F-box protein 452Cyclin-like F-box domain containing protein. (Os08t0461300-01)","8",432,{"v":48412.9,"d":"48412.900"},{"v":7.23759,"d":"7.238"},{"v":0.0513889,"d":"0.051"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT1G13570.3"]
["Os08t0521400-01","Rice","Similar to Zn-finger, RanBP-type, containing protein. (Os08t0521400-01);Similar to Zn-finger, RanBP-type, containing protein. (Os08t0521400-02);Zinc finger, RanBP2-type domain containing protein. (Os08t0521400-03)","8",289,{"v":31255.7,"d":"31255.700"},{"v":9.10113,"d":"9.101"},{"v":-1.01142,"d":"-1.011"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G67325.1"]
["Os08t0532500-01","Rice","Hypothetical conserved gene. (Os08t0532500-01);Conserved hypothetical protein. (Os08t0532500-02)","8",573,{"v":61832.5,"d":"61832.500"},{"v":6.09624,"d":"6.096"},{"v":-0.203839,"d":"-0.204"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G35540.1"]
["Os08t0560600-01","Rice","Similar to nucleobase:cation symporter. (Os08t0560600-01)","8",216,{"v":24862.5,"d":"24862.500"},{"v":10.3753,"d":"10.375"},{"v":-0.812963,"d":"-0.813"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT5G03560.1"]
["Os09t0240850-01","Rice","Hypothetical conserved gene. (Os09t0240850-01)","9",158,{"v":17109.2,"d":"17109.200"},{"v":10.5585,"d":"10.559"},{"v":-0.433544,"d":"-0.434"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT4G30160.1"]
["Os09t0242600-01","Rice","Hypothetical protein. (Os09t0242600-01)","9",146,{"v":16123.9,"d":"16123.900"},{"v":12.4088,"d":"12.409"},{"v":-0.35137,"d":"-0.351"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"cytosol","mitochondrion","cytosol","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G38300.1"]
["Os09t0346400-02","Rice","brassinosteroid receptor kinase (BRI1)-interacting protein 103, BRI1-interacting protein 103, brassinosteroid receptor kinase-interacting protein 103Conserved hypothetical protein. (Os09t0346400-01);Hypothetical conserved gene. (Os09t0346400-02)","9",351,{"v":39220.2,"d":"39220.200"},{"v":9.95956,"d":"9.960"},{"v":-0.933048,"d":"-0.933"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT4G27500.1"]
["Os09t0407200-01","Rice","DNA REPAIR PROTEIN RAD23Similar to RAD23, isoform I. (Os09t0407200-01);Similar to DNA repair protein RAD23. (Os09t0407200-02)","9",392,{"v":41773.2,"d":"41773.200"},{"v":4.0757,"d":"4.076"},{"v":-0.232143,"d":"-0.232"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G38470.1"]
["Os09t0434900-01","Rice","Zinc finger, RING-type domain containing protein. (Os09t0434900-01);Zinc finger, RING-type domain containing protein. (Os09t0434900-02)","9",296,{"v":31769.9,"d":"31769.900"},{"v":7.08266,"d":"7.083"},{"v":-0.222973,"d":"-0.223"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT3G53690.1"]
["Os09t0442900-01","Rice","Similar to Axi 1 (Auxin-independent growth promoter)-like protein. (Os09t0442900-01)","9",638,{"v":71178.2,"d":"71178.200"},{"v":6.99785,"d":"6.998"},{"v":-0.488715,"d":"-0.489"},"cytosol,plasma membrane,plastid","mitochondrion,nucleus,cytosol,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","golgi",null,"mitochondrion",null,null,"plasma membrane","plastid",null,null,"AT5G35570.1"]
["Os09t0501100-00","Rice","Protein of unknown function DUF568 domain containing protein. (Os09t0501100-00)","9",291,{"v":29250.1,"d":"29250.100"},{"v":9.93188,"d":"9.932"},{"v":0.190378,"d":"0.190"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","golgi","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"plastid","extracellular","msms:extracellular:24083427","24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT3G07390.1"]
["Os09t0533600-01","Rice","BROAD-SPECTRUM RESISTANCE 1Similar to Avr9/Cf-9 induced kinase 1. (Os09t0533600-01)","9",406,{"v":44714.1,"d":"44714.100"},{"v":10.2035,"d":"10.204"},{"v":-0.496059,"d":"-0.496"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT5G47070.1"]
["Os09t0539200-01","Rice","BETA-GALACTOSIDASE 11Similar to Relative to SR12 protein (Fragment). (Os09t0539200-01)","9",446,{"v":50822,"d":"50822.000"},{"v":8.24814,"d":"8.248"},{"v":-0.289462,"d":"-0.289"},"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","golgi",null,null,"AT2G16730.1"]
["Os09t0542000-01","Rice","Similar to Ribonuclease P. (Os09t0542000-01)","9",269,{"v":29445.7,"d":"29445.700"},{"v":10.2519,"d":"10.252"},{"v":-0.972119,"d":"-0.972"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G76010.2"]
["Os09t0565700-01","Rice","Prephenate dehydratase domain containing protein. (Os09t0565700-01)","9",401,{"v":43712.2,"d":"43712.200"},{"v":6.95573,"d":"6.956"},{"v":-0.0852868,"d":"-0.085"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G08250.1"]
["Os10t0381800-01","Rice","Conserved hypothetical protein. (Os10t0381800-01);Zinc finger, SWIM-type domain containing protein. (Os10t0381800-02)","10",108,{"v":11136,"d":"11136.000"},{"v":8.51116,"d":"8.511"},{"v":-0.543519,"d":"-0.544"},"plastid","plastid,nucleus","nucleus",null,null,"plastid","plastid","nucleus",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT3G48860.3"]
["Os10t0413500-01","Rice","2OG-Fe(II) oxygenase domain containing protein. (Os10t0413500-01);Similar to Prolyl 4-hydroxylase. (Os10t0413500-03)","10",308,{"v":33622.7,"d":"33622.700"},{"v":6.50452,"d":"6.505"},{"v":-0.33539,"d":"-0.335"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","golgi",null,null,"AT3G28480.1"]
["Os10t0452700-01","Rice","Eggshell protein family protein. (Os10t0452700-01)","10",192,{"v":16877.6,"d":"16877.600"},{"v":6.96205,"d":"6.962"},{"v":-0.304167,"d":"-0.304"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular"]
["Os10t0482000-01","Rice","Conserved hypothetical protein. (Os10t0482000-01)","10",58,{"v":6676.92,"d":"6676.920"},{"v":8.21702,"d":"8.217"},{"v":-0.627586,"d":"-0.628"},"mitochondrion,cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane,extracellular",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT4G23550.1"]
["Os10t0491100-01","Rice","Hypothetical conserved gene. (Os10t0491100-01)","10",39,{"v":4223.83,"d":"4223.830"},{"v":11.7336,"d":"11.734"},{"v":-1.17949,"d":"-1.179"},"mitochondrion","mitochondrion,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G10865.2"]
["Os10t0510500-01","Rice","SMALL AUXIN-UP RNA 56Auxin responsive SAUR protein family protein. (Os10t0510500-01)","10",125,{"v":13937.7,"d":"13937.700"},{"v":7.80972,"d":"7.810"},{"v":-0.2896,"d":"-0.290"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G00880.1"]
["Os10t0516500-01","Rice","Conserved hypothetical protein. (Os10t0516500-01)","10",244,{"v":25088.2,"d":"25088.200"},{"v":4.37976,"d":"4.380"},{"v":-0.891803,"d":"-0.892"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G76880.1"]
["Os10t0557700-01","Rice","Conserved hypothetical protein. (Os10t0557700-01)","10",74,{"v":8003.73,"d":"8003.730"},11.459,{"v":-0.0945946,"d":"-0.095"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid",null,"mitochondrion",null,"plastid","plastid","plastid",null,null,"AT4G32770.1"]
["Os10t0578050-01","Rice","Conserved hypothetical protein. (Os10t0578050-01);Hypothetical protein. (Os10t0578050-02)","10",129,{"v":14360.5,"d":"14360.500"},{"v":12.3157,"d":"12.316"},{"v":-0.507752,"d":"-0.508"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","plastid","nucleus","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT2G20980.1"]
["Os10t0578800-02","Rice","Similar to LrgB-like family protein, expressed. (Os10t0578800-01);LrgB-like protein family protein. (Os10t0578800-02)","10",458,{"v":48292.6,"d":"48292.600"},{"v":8.56136,"d":"8.561"},{"v":0.850218,"d":"0.850"},"cytosol,plasma membrane,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","plasma membrane,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT1G32080.1"]
["Os11t0143300-02","Rice","A-TYPE RESPONSE REGULATOR 9A-type response regulator, Cytokinin signaling (Os11t0143300-01);A-type response regulator, Cytokinin signaling (Os11t0143300-02)","11",208,{"v":23258.5,"d":"23258.500"},{"v":6.08654,"d":"6.087"},{"v":-0.479327,"d":"-0.479"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G57040.1"]
["Os11t0174000-03","Rice","Coatomer, beta subunit domain containing protein. (Os11t0174000-01);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-02);Coatomer, beta subunit domain containing protein. (Os11t0174000-03);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-04)","11",953,{"v":105444,"d":"105444.000"},{"v":5.66777,"d":"5.668"},{"v":-0.00356768,"d":"-0.004"},"cytosol","mitochondrion,nucleus,endoplasmic reticulum,cytosol,golgi","nucleus",null,"golgi",null,"cytosol","nucleus",null,"mitochondrion",null,null,"endoplasmic reticulum","cytosol",null,null,"AT4G31480.4"]
["Os11t0191300-01","Rice","Similar to MEI1 protein. (Os11t0191300-01);Similar to BRCA1 C Terminus domain containing protein, expressed. (Os11t0191300-02);Similar to BRCA1 C Terminus domain containing protein, expressed. (Os11t0191300-03)","11",224,{"v":24250.2,"d":"24250.200"},{"v":8.80615,"d":"8.806"},{"v":-0.071875,"d":"-0.072"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G77320.1"]
["Os11t0191300-03","Rice","Similar to MEI1 protein. (Os11t0191300-01);Similar to BRCA1 C Terminus domain containing protein, expressed. (Os11t0191300-02);Similar to BRCA1 C Terminus domain containing protein, expressed. (Os11t0191300-03)","11",273,{"v":30121.6,"d":"30121.600"},{"v":5.02553,"d":"5.026"},{"v":-0.773993,"d":"-0.774"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G77320.1"]
["Os11t0433500-01","Rice","SEC23 proteinSimilar to Protein transport protein Sec23A (SEC23-related protein A). (Os11t0433500-01)","11",351,{"v":39769.3,"d":"39769.300"},{"v":5.82027,"d":"5.820"},{"v":-0.188319,"d":"-0.188"},"cytosol,plasma membrane","mitochondrion,nucleus,endoplasmic reticulum,cytosol,plastid","nucleus",null,"endoplasmic reticulum",null,"cytosol","cytosol,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G23660.1"]
["Os11t0629600-01","Rice","NB-ARC domain containing protein. (Os11t0629600-01);Similar to Leucine Rich Repeat family protein, expressed. (Os11t0629600-02)","11",578,{"v":66191.2,"d":"66191.200"},{"v":7.19215,"d":"7.192"},{"v":-0.198097,"d":"-0.198"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G07040.1"]
["Os11t0699532-00","Rice","Hypothetical gene. (Os11t0699532-00)","11",74,{"v":7892.1,"d":"7892.100"},{"v":10.0499,"d":"10.050"},{"v":-1.04324,"d":"-1.043"},"mitochondrion,cytosol,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","mitochondrion",null,null,"AT5G04910.1"]
["Os11t0704525-00","Rice","Conserved hypothetical protein. (Os11t0704525-00)","11",79,{"v":8562.16,"d":"8562.160"},{"v":7.51395,"d":"7.514"},{"v":0.183544,"d":"0.184"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","endoplasmic reticulum","plasma membrane,nucleus",null,"plastid",{"$nulls":3},"extracellular",null,null,"AT1G60985.1"]
["Os12t0101800-02","Rice","Similar to Nonphototrophic hypocotyl 1a. (Os12t0101800-01);Similar to Nonphototrophic hypocotyl 1a. (Os12t0101800-02)","12",668,{"v":76003.8,"d":"76003.800"},{"v":8.34758,"d":"8.348"},{"v":-0.54012,"d":"-0.540"},"mitochondrion","mitochondrion,cytosol,vacuole,plasma membrane,plastid","plastid",null,"vacuole",null,"cytosol","plasma membrane",null,"mitochondrion",null,"plastid",null,"cytosol","msms:mitochondrion:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT3G45780.1"]
["Os12t0109900-02","Rice","dsRNA binding protein RBP, RNA binding proteinDouble-stranded RNA-binding-like domain containing protein. (Os12t0109900-01);Similar to DsRNA-binding protein ODB1. (Os12t0109900-02)","12",462,{"v":49809.2,"d":"49809.200"},{"v":6.23006,"d":"6.230"},{"v":0.0679654,"d":"0.068"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G38420.1"]
["Os12t0152700-02","Rice","Amino acid-binding ACT domain containing protein. (Os12t0152700-01);Similar to ACT domain containing protein. (Os12t0152700-02)","12",274,{"v":29928.6,"d":"29928.600"},{"v":4.92185,"d":"4.922"},{"v":-0.121898,"d":"-0.122"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","plastid","cytosol",null,"plastid",null,"plastid",null,"plastid",null,null,"AT5G04740.1"]
["Os12t0156400-01","Rice","Dcp1-like decapping family protein. (Os12t0156400-01)","12",374,{"v":40240.5,"d":"40240.500"},{"v":5.15636,"d":"5.156"},{"v":-0.165241,"d":"-0.165"},"plastid","mitochondrion,peroxisome,plastid,nucleus","nucleus",null,null,"plastid","peroxisome","nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT1G08370.1"]
["Os12t0163600-01","Rice","Pentatricopeptide repeat domain containing protein. (Os12t0163600-01)","12",604,{"v":64539.9,"d":"64539.900"},{"v":7.91584,"d":"7.916"},{"v":0.105629,"d":"0.106"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","mitochondrion,cytosol,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid",null,null,"AT4G15720.1"]
["Os12t0244200-01","Rice","Ribosomal protein L37, mitochondrial domain containing protein. (Os12t0244200-01)","12",130,{"v":14475.8,"d":"14475.800"},{"v":10.9523,"d":"10.952"},{"v":-0.479231,"d":"-0.479"},"mitochondrion","mitochondrion,extracellular,plastid,nucleus","plastid",null,"extracellular","mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT3G01740.1"]
["Os12t0297500-02","Rice","GWD3Pyruvate phosphate dikinase, PEP/pyruvate-binding domain containing protein. (Os12t0297500-01);Similar to Phosphoglucan, water dikinase, chloroplastic. (Os12t0297500-02)","12",484,{"v":52075.1,"d":"52075.100"},{"v":4.88787,"d":"4.888"},{"v":-0.0384298,"d":"-0.038"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G26570.1"]
["Os12t0515500-01","Rice","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 67Similar to Zn-finger transcription factor. (Os12t0515500-01)","12",619,{"v":64729.4,"d":"64729.400"},{"v":6.44705,"d":"6.447"},{"v":-0.198061,"d":"-0.198"},"extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT2G41900.1"]
["Os12t0556200-01","Rice","Calmodulin binding protein-like family protein. (Os12t0556200-01);Non-protein coding transcript. (Os12t0556200-02)","12",576,{"v":64983.7,"d":"64983.700"},{"v":6.54921,"d":"6.549"},{"v":-0.556771,"d":"-0.557"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G18750.1"]
["Os12t0613500-01","Rice","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132SRP40, C-terminal domain containing protein. (Os12t0613500-01);Similar to SRP40, C-terminal domain containing protein, expressed. (Os12t0613500-02)","12",448,{"v":48091.7,"d":"48091.700"},{"v":9.50495,"d":"9.505"},{"v":-1.05313,"d":"-1.053"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT5G57120.1"]
["Os12t0635500-01","Rice","Protein of unknown function DUF266, plant domain containing protein. (Os12t0635500-01)","12",407,{"v":44793.6,"d":"44793.600"},{"v":9.5361,"d":"9.536"},{"v":-0.133415,"d":"-0.133"},"plasma membrane,plastid,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","golgi","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT3G21310.3"]
["Os01t0149900-01","Rice","Conserved hypothetical protein. (Os01t0149900-01)","1",742,{"v":82407.7,"d":"82407.700"},{"v":4.92688,"d":"4.927"},{"v":-0.64124,"d":"-0.641"},"nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","nucleus","nucleus","plastid","mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT5G02390.3"]
["Os01t0165000-01","Rice","DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2ATranscription factor, Dehydration and salt stress tolerance (Os01t0165000-01);DRE binding protein 2. (Os01t0165000-02)","1",274,{"v":30666.8,"d":"30666.800"},{"v":5.8268,"d":"5.827"},{"v":-0.844891,"d":"-0.845"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G05410.2"]
["Os01t0267200-01","Rice","19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 11Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11). (Os01t0267200-01)","1",307,{"v":34340.7,"d":"34340.700"},{"v":6.58998,"d":"6.590"},{"v":-0.211401,"d":"-0.211"},"plasma membrane,plastid","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT5G23540.1"]
["Os01t0274800-01","Rice","CARBON STARVED ANTHERR2R3-type MYB transcription factor, Sugar partitioning into anther (Os01t0274800-01)","1",265,{"v":28713.4,"d":"28713.400"},{"v":7.43295,"d":"7.433"},{"v":-0.624151,"d":"-0.624"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G69560.1"]
["Os01t0528000-01","Rice","Transcription factor IIIC, subunit 5 domain containing protein. (Os01t0528000-01)","1",148,{"v":15669.7,"d":"15669.700"},{"v":9.63011,"d":"9.630"},{"v":-0.352027,"d":"-0.352"},"nucleus","cytosol,extracellular,plastid,nucleus","nucleus",null,"extracellular","plastid","cytosol","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT3G49410.1"]
["Os01t0679700-02","Rice","Similar to 60S ribosomal protein L37a. (Os01t0679700-02);Similar to 60S ribosomal protein L37a. (Os01t0679700-03)","1",92,{"v":10243.6,"d":"10243.600"},{"v":10.9604,"d":"10.960"},{"v":-0.540217,"d":"-0.540"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid,nucleus","mitochondrion","mitochondrion",null,null,"plastid","cytosol","msms:nucleus:19621931,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G10950.1"]
["Os01t0736900-01","Rice","Reticulon family protein. (Os01t0736900-01);Similar to seed maturation protein. (Os01t0736900-02)","1",253,{"v":28285.5,"d":"28285.500"},{"v":8.57497,"d":"8.575"},{"v":0.0193676,"d":"0.019"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","nucleus","msms:plasma membrane:18260611,msms:golgi:25047511,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT4G23630.2"]
["Os01t0752700-01","Rice","Similar to GTP-binding protein. (Os01t0752700-01)","1",673,{"v":72800.3,"d":"72800.300"},{"v":7.01364,"d":"7.014"},{"v":-0.125557,"d":"-0.126"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","mitochondrion,plastid","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT2G31060.2"]
["Os01t0858700-01","Rice","Conserved hypothetical protein. (Os01t0858700-01)","1",403,{"v":45599.3,"d":"45599.300"},{"v":6.08384,"d":"6.084"},{"v":-0.611166,"d":"-0.611"},"nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","peroxisome,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G27590.1"]
["Os01t0886300-01","Rice","K Homology domain containing protein. (Os01t0886300-01);Hypothetical gene. (Os01t0886300-02);K Homology domain containing protein. (Os01t0886300-03)","1",290,{"v":32558.1,"d":"32558.100"},{"v":8.96914,"d":"8.969"},{"v":-0.561724,"d":"-0.562"},"plasma membrane","plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus",null,"plastid",null,"plastid","nucleus","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G09660.3"]
["Os01t0900900-01","Rice","Ovarian tumour, otubain domain containing protein. (Os01t0900900-01)","1",166,{"v":19159.8,"d":"19159.800"},{"v":7.93445,"d":"7.934"},{"v":-0.612048,"d":"-0.612"},"cytosol","mitochondrion,nucleus,cytosol,golgi,plastid","plastid",{"$nulls":3},"cytosol","mitochondrion,nucleus,cytosol,golgi,plastid",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT3G57810.2"]
["Os01t0905800-02","Rice","CYTOPLAST ALDOLASE 1Aldolase C-1. (Os01t0905800-01);Aldolase C-1. (Os01t0905800-02);Aldolase C-1. (Os01t0905800-03)","1",203,{"v":21974.5,"d":"21974.500"},{"v":6.53274,"d":"6.533"},{"v":-0.134483,"d":"-0.134"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G36460.1"]
["Os01t0925700-01","Rice","Similar to predicted protein. (Os01t0925700-01)","1",371,{"v":41634.2,"d":"41634.200"},{"v":9.80894,"d":"9.809"},{"v":-0.47628,"d":"-0.476"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G54610.1"]
["Os02t0105100-02","Rice","Sec16, central conserved domain domain containing protein. (Os02t0105100-01);Hypothetical conserved gene. (Os02t0105100-02)","2",330,{"v":35010.3,"d":"35010.300"},9.228,{"v":-0.757576,"d":"-0.758"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G47490.2"]
["Os02t0137800-02","Rice","heterotrimeric G-protein gamma subunit 2, G protein gamma2 subunit, rice G protein gamma subunit 2, G protein gamma subunit 2Heterotrimeric G protein gamma subunit 2, Regulation of abiotic stresses (Os02t0137800-01);Similar to G protein gamma subunit 2. (Os02t0137800-02)","2",126,{"v":13934.4,"d":"13934.400"},{"v":5.21714,"d":"5.217"},{"v":-0.669841,"d":"-0.670"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G61190.1"]
["Os02t0189100-01","Rice","Mediator 11_1Mediator complex, subunit Med11 domain containing protein. (Os02t0189100-01)","2",115,{"v":12991.7,"d":"12991.700"},{"v":5.24571,"d":"5.246"},{"v":-0.403478,"d":"-0.403"},"extracellular,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol","msms:nucleus:19621931,msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G01435.1"]
["Os02t0208900-01","Rice","Similar to ZIGA2 protein (Fragment). (Os02t0208900-01);Similar to GTP-ase activating protein for Arf containing protein. (Os02t0208900-02);Similar to GTP-ase activating protein for Arf containing protein. (Os02t0208900-03)","2",728,{"v":79095.4,"d":"79095.400"},{"v":7.33927,"d":"7.339"},{"v":-0.901923,"d":"-0.902"},"cytosol","mitochondrion,nucleus,cytosol,golgi","nucleus",{"$nulls":3},"cytosol","nucleus,golgi",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G13350.1"]
["Os02t0209400-01","Rice","Conserved hypothetical protein. (Os02t0209400-01)","2",180,{"v":19176.5,"d":"19176.500"},{"v":11.5266,"d":"11.527"},-0.485,"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","plastid",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT2G25735.1"]
["Os02t0245100-02","Rice","OsWD40-39Similar to Peroxisomal targeting signal type 2 receptor. (Os02t0245100-01);Conserved hypothetical protein. (Os02t0245100-02)","2",216,{"v":23001.4,"d":"23001.400"},{"v":12.8169,"d":"12.817"},{"v":-0.855093,"d":"-0.855"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus"]
["Os02t0498100-01","Rice","Hypothetical protein. (Os02t0498100-01)","2",83,{"v":8923.97,"d":"8923.970"},{"v":5.67538,"d":"5.675"},{"v":0.442169,"d":"0.442"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","extracellular",null,null,"AT1G35890.1"]
["Os02t0506500-03","Rice","Similar to ubiquitin-activating enzyme E1 domain-containing protein 1. (Os02t0506500-01);Similar to predicted protein. (Os02t0506500-02);Similar to ubiquitin-activating enzyme E1 domain-containing protein 1. (Os02t0506500-03);NAD(P)-binding domain containing protein. (Os02t0506500-04)","2",401,{"v":43500.5,"d":"43500.500"},{"v":4.20875,"d":"4.209"},{"v":-0.185536,"d":"-0.186"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G05350.1"]
["Os02t0539500-01","Rice","VQ motif-containing protein 8VQ domain containing protein. (Os02t0539500-01)","2",275,{"v":28383.6,"d":"28383.600"},{"v":9.54784,"d":"9.548"},{"v":-0.0901818,"d":"-0.090"},"nucleus","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT3G18690.1"]
["Os02t0604300-01","Rice","CSTLP5Nucleotide-sugar transporter family protein. (Os02t0604300-01)","2",405,{"v":44890.4,"d":"44890.400"},{"v":10.1997,"d":"10.200"},{"v":0.415802,"d":"0.416"},"plasma membrane,plastid,golgi","mitochondrion,plasma membrane,plastid,golgi","plastid",null,null,"mitochondrion","golgi","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","plastid",null,null,"AT2G43240.1"]
["Os02t0643800-01","Rice","SMALL AUXIN-UP RNA 11Auxin responsive SAUR protein family protein. (Os02t0643800-01)","2",190,{"v":21044.7,"d":"21044.700"},{"v":12.0564,"d":"12.056"},{"v":-0.495263,"d":"-0.495"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","mitochondrion,plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G60690.1"]
["Os02t0654400-01","Rice","Transcription initiation factor TFIID component TAF4 domain containing protein. (Os02t0654400-01)","2",728,{"v":80104.8,"d":"80104.800"},{"v":10.1752,"d":"10.175"},{"v":-1.01772,"d":"-1.018"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G43130.1"]
["Os02t0714000-03","Rice","Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os02t0714000-01);Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica. (Os02t0714000-02);Hypothetical gene. (Os02t0714000-03)","2",127,{"v":13827.2,"d":"13827.200"},{"v":9.05522,"d":"9.055"},{"v":0.658268,"d":"0.658"},"plastid","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","plasma membrane,plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid",null,null,"AT4G08990.1"]
["Os02t0819200-01","Rice","Thioredoxin domain 2 containing protein. (Os02t0819200-01)","2",188,{"v":20613.8,"d":"20613.800"},{"v":5.99295,"d":"5.993"},{"v":-0.155851,"d":"-0.156"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G04260.1"]
["Os03t0125900-02","Rice","Conserved hypothetical protein. (Os03t0125900-01);Hypothetical conserved gene. (Os03t0125900-02)","3",182,{"v":19069.2,"d":"19069.200"},{"v":10.2886,"d":"10.289"},{"v":-0.642857,"d":"-0.643"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G76980.1"]
["Os03t0137500-01","Rice","voltage-dependent anion channel 6, voltage-dependent anion-selective channel 6Similar to VDAC3.1. (Os03t0137500-01);Hypothetical conserved gene. (Os03t0137500-02);Similar to VDAC3.1. (Os03t0137500-03)","3",276,{"v":29685,"d":"29685.000"},{"v":8.61906,"d":"8.619"},{"v":-0.243841,"d":"-0.244"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","mitochondrion","mitochondrion","mitochondrion",null,null,"nucleus","mitochondrion",null,null,"AT5G57490.1"]
["Os03t0151700-01","Rice","OsWD40-63Similar to WD repeat protein (Fragment). (Os03t0151700-01);Hypothetical conserved gene. (Os03t0151700-02)","3",940,{"v":103414,"d":"103414.000"},{"v":6.57499,"d":"6.575"},{"v":-0.263511,"d":"-0.264"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT3G21540.1"]
["Os03t0201600-02","Rice","Similar to ischemia/reperfusion inducible protein. (Os03t0201600-01);Similar to ischemia/reperfusion inducible protein. (Os03t0201600-02)","3",274,{"v":29375.2,"d":"29375.200"},{"v":8.14875,"d":"8.149"},{"v":0.0251825,"d":"0.025"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G60590.2"]
["Os03t0214600-02","Rice","19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 9BSimilar to 26S proteasome subunit-like protein (26S proteasome subunit RPN9a). (Os03t0214600-01);Similar to 26S proteasome non-ATPase regulatory subunit 13. (Os03t0214600-02)","3",328,{"v":37067.9,"d":"37067.900"},{"v":5.62142,"d":"5.621"},{"v":0.0521341,"d":"0.052"},"cytosol,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G19006.1"]
["Os03t0234200-01","Rice","ubiquitin fused to CEP52 gene-1Similar to Ubiquitin fusion protein (Fragment). (Os03t0234200-01)","3",49,{"v":5825.33,"d":"5825.330"},{"v":11.3335,"d":"11.334"},{"v":-1.23878,"d":"-1.239"},"plasma membrane,extracellular","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT2G36170.1"]
["Os03t0261900-02","Rice","Similar to HEAT repeat family protein, expressed. (Os03t0261900-01);Armadillo-like helical domain containing protein. (Os03t0261900-02)","3",326,{"v":35475.9,"d":"35475.900"},{"v":4.56306,"d":"4.563"},{"v":0.111656,"d":"0.112"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G27640.1"]
["Os03t0268100-01","Rice","Similar to T-snare. (Os03t0268100-01)","3",445,{"v":50429.7,"d":"50429.700"},{"v":4.98922,"d":"4.989"},{"v":-0.766742,"d":"-0.767"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT5G59210.1"]
["Os03t0640100-01","Rice","OsWD40-79, OsMSI1Similar to WD-40 repeat protein MSI1. (Os03t0640100-01)","3",428,{"v":48362.3,"d":"48362.300"},{"v":4.53847,"d":"4.538"},{"v":-0.490421,"d":"-0.490"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G58230.1"]
["Os03t0657100-02","Rice","plant U-box-containing protein 24, U-box protein 24Armadillo-like helical domain containing protein. (Os03t0657100-01);Similar to predicted protein. (Os03t0657100-02)","3",158,{"v":17008.3,"d":"17008.300"},{"v":5.73288,"d":"5.733"},{"v":0.0341772,"d":"0.034"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G20780.1"]
["Os03t0718100-01","Rice","ACTIN 1Actin 1. (Os03t0718100-01)","3",377,{"v":41815.2,"d":"41815.200"},{"v":5.15905,"d":"5.159"},{"v":-0.185146,"d":"-0.185"},"plasma membrane","mitochondrion,cytosol,cytoskeleton","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytoskeleton","cytosol","msms:extracellular:18372294,msms:plasma membrane:19502382,msms:nucleus:19621931,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G12110.1"]
["Os03t0747300-01","Rice","Protein of unknown function DUF124 family protein. (Os03t0747300-01)","3",282,{"v":30673.2,"d":"30673.200"},{"v":7.91098,"d":"7.911"},{"v":0.219858,"d":"0.220"},"cytosol,plasma membrane,plastid,golgi","mitochondrion,nucleus,cytosol,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plastid","plastid","mitochondrion",null,null,"golgi","plasma membrane",null,null,"AT4G17420.1"]
["Os03t0792500-01","Rice","MATH-BTB protein 5, MDC protein with a BTB domain 5, MDC protein having BTB domain 5Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-01);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-02);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-03)","3",431,{"v":46986,"d":"46986.000"},{"v":5.42517,"d":"5.425"},{"v":-0.293968,"d":"-0.294"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion","peroxisome",null,"cytosol","cytosol",null,null,"AT3G03740.1"]
["Os03t0792500-02","Rice","MATH-BTB protein 5, MDC protein with a BTB domain 5, MDC protein having BTB domain 5Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-01);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-02);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-03)","3",431,{"v":46986,"d":"46986.000"},{"v":5.42517,"d":"5.425"},{"v":-0.293968,"d":"-0.294"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion","peroxisome",null,"cytosol","cytosol",null,null,"AT3G03740.1"]
["Os03t0796800-00","Rice","Similar to guanylate-binding family protein. (Os03t0796800-00)","3",402,{"v":46943.2,"d":"46943.200"},{"v":9.76893,"d":"9.769"},{"v":-0.247761,"d":"-0.248"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT2G38840.1"]
["Os03t0826600-02","Rice","NON-SPECIFIC PHOSPHOLIPASE C1Similar to Phospholipase (Fragment). (Os03t0826600-01);Non-specific phospholipase C1, Modulation of silicon distribution, Mechanical strength, Seed shattering (Os03t0826600-02)","3",409,{"v":46175.6,"d":"46175.600"},{"v":7.24161,"d":"7.242"},{"v":-0.418337,"d":"-0.418"},"cytosol,peroxisome,nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome",null,null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G07230.1"]
["Os03t0843300-01","Rice","LATE EMBRYOGENESIS ABUNDANT PROTEIN 7Late embryogenesis abundant protein 2 family protein. (Os03t0843300-01);Late embryogenesis abundant protein 2 family protein. (Os03t0843300-02)","3",316,{"v":34800.5,"d":"34800.500"},{"v":4.65826,"d":"4.658"},{"v":-0.382278,"d":"-0.382"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G44060.1"]
["Os03t0851300-02","Rice","19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 5Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-01);Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-02);Winged helix repressor DNA-binding domain containing protein. (Os03t0851300-03);Similar to 26S proteasome subunit RPN5b. (Os03t0851300-04)","3",443,{"v":50651.9,"d":"50651.900"},{"v":7.73623,"d":"7.736"},{"v":-0.221445,"d":"-0.221"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"mitochondrion",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT5G09900.1"]
["Os04t0270100-01","Rice","Similar to GTP-binding protein. (Os04t0270100-01);Similar to GTP-binding protein. (Os04t0270100-02);Similar to G1 to S phase transition protein 1 homolog (GTP-binding protein GST1- HS). (Os04t0270100-03)","4",468,{"v":51189.7,"d":"51189.700"},{"v":4.62291,"d":"4.623"},{"v":-0.29188,"d":"-0.292"},"cytosol","mitochondrion,cytosol,plastid,cytoskeleton","cytosol",null,"cytosol",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"cytoskeleton","cytosol",null,null,"AT1G18070.1"]
["Os04t0314100-00","Rice","Similar to H0107B07.2 protein. (Os04t0314100-00)","4",390,{"v":42756.5,"d":"42756.500"},{"v":7.27746,"d":"7.277"},{"v":-0.118462,"d":"-0.118"},"plasma membrane","mitochondrion,plastid,golgi","plastid",{"$nulls":3},"mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion",null,"golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G22340.1"]
["Os04t0399000-00","Rice","Similar to Ribosomal protein S27. (Os04t0399000-00)","4",192,{"v":20433.4,"d":"20433.400"},{"v":9.10051,"d":"9.101"},{"v":-0.235938,"d":"-0.236"},"cytosol,extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol","msms:extracellular:28232208","28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G61110.1"]
["Os04t0454600-00","Rice","Similar to OSIGBa0093K19.10 protein. (Os04t0454600-00)","4",573,{"v":63343.9,"d":"63343.900"},{"v":6.26879,"d":"6.269"},{"v":-0.291099,"d":"-0.291"},"cytosol","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid",null,"mitochondrion",null,"plastid",null,"cytosol"]
["Os04t0462900-05","Rice","Similar to prohibitin2. (Os04t0462900-01);Similar to Prohibitin. (Os04t0462900-02);Similar to prohibitin2. (Os04t0462900-05);Similar to prohibitin2. (Os04t0462900-06)","4",287,{"v":30803.8,"d":"30803.800"},{"v":7.72277,"d":"7.723"},{"v":-0.00801394,"d":"-0.008"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","mitochondrion",null,null,"AT5G40770.1"]
["Os04t0498200-01","Rice","cytochrome c oxidase subunit VIb-2Similar to OSIGBa0092E01.14 protein. (Os04t0498200-01)","4",77,{"v":9038.57,"d":"9038.570"},{"v":7.28929,"d":"7.289"},{"v":-0.793507,"d":"-0.794"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"mitochondrion",null,"cytosol","mitochondrion,nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT1G22450.1"]
["Os04t0584800-02","Rice","GTP1/OBG domain containing protein. (Os04t0584800-01);Hypothetical conserved gene. (Os04t0584800-02)","4",262,{"v":29120.3,"d":"29120.300"},{"v":4.01542,"d":"4.015"},{"v":-0.741985,"d":"-0.742"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G65960.1"]
["Os04t0630000-01","Rice","SDA1 domain containing protein. (Os04t0630000-01)","4",581,{"v":65434.6,"d":"65434.600"},{"v":6.20193,"d":"6.202"},{"v":-1.0148,"d":"-1.015"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G13160.1"]
["Os05t0208000-01","Rice","Similar to 2-oxoglutarate/malate translocator. (Os05t0208000-01);Similar to Mitochondrial 2-oxoglutarate/malate carrier protein. (Os05t0208000-02);Similar to 2-oxoglutarate/malate translocator. (Os05t0208000-03);Similar to Mitochondrial 2-oxoglutarate/malate carrier protein. (Os05t0208000-04)","5",306,{"v":32804.1,"d":"32804.100"},10.058,{"v":0.100654,"d":"0.101"},"cytosol,peroxisome,extracellular","mitochondrion,extracellular,nucleus,cytosol,peroxisome","nucleus",null,"mitochondrion","mitochondrion","cytosol","mitochondrion",null,"mitochondrion",null,null,"extracellular","peroxisome",null,null,"AT5G19760.1"]
["Os05t0208000-04","Rice","Similar to 2-oxoglutarate/malate translocator. (Os05t0208000-01);Similar to Mitochondrial 2-oxoglutarate/malate carrier protein. (Os05t0208000-02);Similar to 2-oxoglutarate/malate translocator. (Os05t0208000-03);Similar to Mitochondrial 2-oxoglutarate/malate carrier protein. (Os05t0208000-04)","5",190,{"v":20556.2,"d":"20556.200"},{"v":9.36306,"d":"9.363"},{"v":0.238947,"d":"0.239"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","mitochondrion",null,"mitochondrion",{"$nulls":3},"extracellular",null,null,"AT5G19760.1"]
["Os05t0268500-02","Rice","SERINE CARBOXYPEPTIDASE 27Similar to Serine carboxypeptidase 2. (Os05t0268500-01);Similar to Serine carboxypeptidase II chains A and B (EC 3.4.16.6) (Carboxypeptidase D) (CPDW-II) (CP-WII). (Os05t0268500-02);Similar to Serine carboxypeptidase 2. (Os05t0268500-03);Similar to Serine carboxypeptidase 2. (Os05t0268500-04)","5",474,{"v":52992.5,"d":"52992.500"},{"v":6.86694,"d":"6.867"},{"v":-0.268987,"d":"-0.269"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","extracellular","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT3G07990.1"]
["Os05t0268500-04","Rice","SERINE CARBOXYPEPTIDASE 27Similar to Serine carboxypeptidase 2. (Os05t0268500-01);Similar to Serine carboxypeptidase II chains A and B (EC 3.4.16.6) (Carboxypeptidase D) (CPDW-II) (CP-WII). (Os05t0268500-02);Similar to Serine carboxypeptidase 2. (Os05t0268500-03);Similar to Serine carboxypeptidase 2. (Os05t0268500-04)","5",219,{"v":24238.1,"d":"24238.100"},{"v":8.2718,"d":"8.272"},{"v":0.13242,"d":"0.132"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","vacuole","msms:cytosol:19685898","19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009","AT2G24010.1"]
["Os05t0460200-01","Rice","UBIQUITIN-CONJUGATING ENZYME 12Similar to Ubiquitin carrier protein. (Os05t0460200-01)","5",169,{"v":18979.4,"d":"18979.400"},{"v":4.98822,"d":"4.988"},{"v":-0.447337,"d":"-0.447"},"cytosol,plastid,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT5G59300.1"]
["Os05t0494500-02","Rice","Protein of unknown function DUF250 domain containing protein. (Os05t0494500-01);Protein of unknown function DUF250 domain containing protein. (Os05t0494500-02)","5",354,{"v":38786,"d":"38786.000"},{"v":9.45627,"d":"9.456"},{"v":0.624859,"d":"0.625"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT4G32390.1"]
["Os05t0539700-01","Rice","nucleosome assembly protein 1-like protein 2, Nucleosome assembly protein 1;2, NAP1-like protein 2Similar to Nucleosome assembly protein 1. (Os05t0539700-01)","5",364,{"v":41685.7,"d":"41685.700"},{"v":4.07925,"d":"4.079"},{"v":-1.04011,"d":"-1.040"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","gfp:cytosol:15980199,msms:nucleus:19621931,msms:cytosol:19685898,msms:plastid:21433289,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503","15980199:Aiwu:A:Dong,Ziqiang:Z:Liu,Yan:Y:Zhu,Fang:F:Yu,Ziyu:Z:Li,Kaiming:K:Cao,Wen-Hui:WH:Shen:2005,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G19480.3"]
["Os05t0593800-01","Rice","Similar to Dual specificity kinase 1. (Os05t0593800-01)","5",473,{"v":53485.2,"d":"53485.200"},{"v":10.0736,"d":"10.074"},{"v":-0.676533,"d":"-0.677"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G72710.1"]
["Os06t0143900-02","Rice","beta prime COP coatomer proteinSimilar to Coatomer protein complex, beta prime; beta'-COP protein. (Os06t0143900-01);Similar to Coatomer complex subunit. (Os06t0143900-02);Similar to Coatomer complex subunit. (Os06t0143900-03)","6",338,{"v":37716.3,"d":"37716.300"},{"v":4.04088,"d":"4.041"},{"v":-0.36213,"d":"-0.362"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,null,"AT3G15980.3"]
["Os06t0168600-01","Rice","VIRESCENT 3Ribonucleotide reductase, Chloroplast biogenesis (Os06t0168600-01)","6",814,{"v":91590.3,"d":"91590.300"},{"v":7.43142,"d":"7.431"},{"v":-0.35344,"d":"-0.353"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","mitochondrion,cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G21790.1"]
["Os06t0474200-01","Rice","SKIP interacting protein 2, SKIPa-interacting protein 2, SKIPa-interacting protein 2Similar to SKIP interacting protein 2. (Os06t0474200-01)","6",352,{"v":39359.4,"d":"39359.400"},{"v":4.83645,"d":"4.836"},{"v":-0.773295,"d":"-0.773"},"nucleus","mitochondrion,plasma membrane,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plasma membrane","nucleus",null,null,"AT3G54170.1"]
["Os06t0650100-01","Rice","UBIQUITIN 5Similar to Ubiquitin-NEDD8-like protein RUB2. (Os06t0650100-01)","6",153,{"v":17095.7,"d":"17095.700"},{"v":5.84864,"d":"5.849"},{"v":-0.462092,"d":"-0.462"},"cytosol,plasma membrane,extracellular","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:24083427,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G31340.1"]
["Os06t0693700-03","Rice","Stress induced DUF1644 protein 366Protein of unknown function DUF1644 family protein. (Os06t0693700-01);Similar to predicted protein. (Os06t0693700-02);Similar to predicted protein. (Os06t0693700-03);Protein of unknown function DUF1644 family protein. (Os06t0693700-04)","6",317,{"v":36498.1,"d":"36498.100"},{"v":6.95441,"d":"6.954"},{"v":-0.552997,"d":"-0.553"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G31410.3"]
["Os07t0230400-01","Rice","Conserved hypothetical protein. (Os07t0230400-01)","7",199,{"v":20644.8,"d":"20644.800"},{"v":12.3258,"d":"12.326"},{"v":-0.321608,"d":"-0.322"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT2G29060.2"]
["Os07t0568300-01","Rice","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 50Similar to ZF protein (Fragment). (Os07t0568300-01);Similar to ZF protein (Fragment). (Os07t0568300-02)","7",657,{"v":69395.7,"d":"69395.700"},{"v":7.07196,"d":"7.072"},{"v":-0.341248,"d":"-0.341"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G41900.1"]
["Os07t0588200-02","Rice","FH13Actin-binding FH2 domain containing protein. (Os07t0588200-01);Similar to Formin-like protein 13. (Os07t0588200-02)","7",191,{"v":21181.3,"d":"21181.300"},{"v":6.28904,"d":"6.289"},{"v":-0.365445,"d":"-0.365"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G25500.1"]
["Os07t0674700-01","Rice","Similar to 60S ribosomal protein L18. (Os07t0674700-01)","7",195,{"v":21950.2,"d":"21950.200"},{"v":11.9529,"d":"11.953"},{"v":-0.434872,"d":"-0.435"},"plasma membrane","mitochondrion,cytosol,plastid","plastid",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT5G27850.1"]
["Os08t0104100-02","Rice","Similar to Transmembrane protein 18. (Os08t0104100-01);Similar to transmembrane protein 18. (Os08t0104100-02);Similar to Transmembrane protein 18. (Os08t0104100-03)","8",78,{"v":8599.36,"d":"8599.360"},10.955,{"v":-0.230769,"d":"-0.231"},"cytosol","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid","nucleus","cytosol",null,null,"AT4G05100.1"]
["Os08t0104100-03","Rice","Similar to Transmembrane protein 18. (Os08t0104100-01);Similar to transmembrane protein 18. (Os08t0104100-02);Similar to Transmembrane protein 18. (Os08t0104100-03)","8",180,{"v":20315.8,"d":"20315.800"},{"v":9.33642,"d":"9.336"},{"v":0.361111,"d":"0.361"},"cytosol","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","peroxisome",null,null,"AT1G34350.1"]
["Os08t0258200-02","Rice","XBOS35Ankyrin domain containing protein. (Os08t0258200-01);Ankyrin domain containing protein. (Os08t0258200-02)","8",495,{"v":53085.1,"d":"53085.100"},{"v":8.52113,"d":"8.521"},{"v":0.060202,"d":"0.060"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G57740.1"]
["Os08t0374100-02","Rice","UBIQUITIN-CONJUGATING ENZYME 5Similar to Ubiquitin carrier protein. (Os08t0374100-01);Similar to Ubiquitin carrier protein. (Os08t0374100-02)","8",224,{"v":24634.6,"d":"24634.600"},{"v":9.3696,"d":"9.370"},{"v":-0.478571,"d":"-0.479"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT4G36800.1"]
["Os08t0482700-01","Rice","UCLACYANIN-LIKE PROTEIN 30Cupredoxin domain containing protein. (Os08t0482700-01);Conserved hypothetical protein. (Os08t0482700-02)","8",181,{"v":17378.4,"d":"17378.400"},{"v":7.38205,"d":"7.382"},{"v":0.349171,"d":"0.349"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","msms:extracellular:23159799,msms:extracellular:24083427","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G72230.1"]
["Os08t0503800-01","Rice","REDUCED CULM NUMBER 11Beta 1,2-xylosyltransferase, Response to abiotic stresses and phytohormones (Os08t0503800-01)","8",533,{"v":58899.2,"d":"58899.200"},{"v":7.73911,"d":"7.739"},{"v":-0.288555,"d":"-0.289"},"mitochondrion","mitochondrion,plastid,golgi","plastid",null,"golgi","mitochondrion","golgi","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G55500.1"]
["Os08t0562200-02","Rice","NAC DOMAIN-CONTAINING PROTEIN 40Similar to CUC2. (Os08t0562200-02);Hypothetical conserved gene. (Os08t0562200-03)","8",656,{"v":71941.3,"d":"71941.300"},{"v":4.33797,"d":"4.338"},{"v":-0.459146,"d":"-0.459"},"nucleus","plastid,nucleus","nucleus",null,null,"plastid","nucleus","nucleus",null,"plastid",null,null,"plastid","nucleus",null,null,"AT5G04410.1"]
["Os09t0407700-01","Rice","Haloacid dehalogenase-like hydrolase domain containing protein. (Os09t0407700-01)","9",252,{"v":27513.9,"d":"27513.900"},{"v":4.68134,"d":"4.681"},{"v":-0.136905,"d":"-0.137"},"cytosol","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"cytosol","peroxisome,plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT2G38740.1"]
["Os10t0157400-01","Rice","Serine/threonine protein kinase domain containing protein. (Os10t0157400-01)","10",327,{"v":35092,"d":"35092.000"},{"v":6.3502,"d":"6.350"},{"v":-0.166972,"d":"-0.167"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT1G67580.1"]
["Os10t0183900-01","Rice","Ribosomal RNA adenine methylase transferase family protein. (Os10t0183900-01);Ribosomal RNA adenine methylase transferase family protein. (Os10t0183900-02)","10",364,{"v":40283.2,"d":"40283.200"},{"v":9.34743,"d":"9.347"},{"v":-0.259615,"d":"-0.260"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"plastid","mitochondrion",null,null,"AT2G47420.1"]
["Os10t0422200-02","Rice","Similar to Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S- methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S- methyltransferase 3) (ZmHMT-3). (Os10t0422200-01);Similar to Homocysteine S-methyltransferase 3 (EC 2.1.1.10) (S- methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S- methyltransferase 3) (ZmHMT-3). (Os10t0422200-02)","10",335,{"v":36510.3,"d":"36510.300"},4.851,{"v":-0.101791,"d":"-0.102"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G63250.1"]
["Os11t0299300-01","Rice","Lipase, class 3 family protein. (Os11t0299300-01)","11",460,{"v":49802.8,"d":"49802.800"},{"v":8.45886,"d":"8.459"},{"v":-0.098913,"d":"-0.099"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G05800.1"]
["Os11t0660500-01","Rice","translationally controlled tumor proteinTranslationally controlled tumor protein, Mercury tolerance (Os11t0660500-01);Splicing variant of OsTCTPa (Os11t0660500-02)","11",168,{"v":18947.3,"d":"18947.300"},{"v":4.27536,"d":"4.275"},{"v":-0.382738,"d":"-0.383"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:18372294,msms:nucleus:23777608,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G16640.1"]
["Os12t0170600-01","Rice","Similar to Alpha-1,4-fucosyltransferase. (Os12t0170600-01)","12",444,{"v":49450.2,"d":"49450.200"},{"v":10.5516,"d":"10.552"},{"v":-0.513288,"d":"-0.513"},"cytosol,nucleus","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"golgi",null,"nucleus","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol",null,null,"AT1G71990.1"]
["Os01t0106300-01","Rice","Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-). (Os01t0106300-01)","1",318,{"v":34307.1,"d":"34307.100"},{"v":6.74565,"d":"6.746"},{"v":-0.112264,"d":"-0.112"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"plastid","mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G75290.2"]
["Os01t0294700-01","Rice","peroxidase, class III peroxidase 11Haem peroxidase, plant/fungal/bacterial family protein. (Os01t0294700-01)","1",347,{"v":37915.2,"d":"37915.200"},{"v":6.93499,"d":"6.935"},{"v":-0.110663,"d":"-0.111"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:21255809,msms:extracellular:24083427","21255809:T:T:Shinano,S:S:Komatsu,T:T:Yoshimura,S:S:Tokutake,F-J:FJ:Kong,T:T:Watanabe,J:J:Wasaki,M:M:Osaki:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT4G33420.1"]
["Os01t0750300-01","Rice","BRITTLE CULM 7Similar to Cellulose synthase (Fragment). (Os01t0750300-01);Similar to cDNA clone:J023093O20, full insert sequence. (Os01t0750300-02);Similar to cDNA clone:J023093O20, full insert sequence. (Os01t0750300-03)","1",989,{"v":111032,"d":"111032.000"},{"v":6.46416,"d":"6.464"},{"v":-0.111729,"d":"-0.112"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT4G18780.1"]
["Os01t0750300-02","Rice","BRITTLE CULM 7Similar to Cellulose synthase (Fragment). (Os01t0750300-01);Similar to cDNA clone:J023093O20, full insert sequence. (Os01t0750300-02);Similar to cDNA clone:J023093O20, full insert sequence. (Os01t0750300-03)","1",536,{"v":60377.3,"d":"60377.300"},{"v":6.86428,"d":"6.864"},{"v":0.173321,"d":"0.173"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","plasma membrane","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT4G18780.1"]
["Os01t0850700-02","Rice","LACCASE 8Similar to Laccase-7. (Os01t0850700-01);Cupredoxin domain containing protein. (Os01t0850700-02)","1",559,{"v":60215.6,"d":"60215.600"},{"v":5.31138,"d":"5.311"},{"v":0.0635063,"d":"0.064"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT2G30210.1"]
["Os02t0148000-01","Rice","CCT domain-containing gene 3, CCT (CO, CO-LIKE and TOC1) domain protein 3, CCT domain protein 3, CCT MOTIF FAMILY (CMF) gene 3CCT domain containing protein. (Os02t0148000-01)","2",471,{"v":49754.6,"d":"49754.600"},{"v":9.36713,"d":"9.367"},{"v":-0.554777,"d":"-0.555"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","plastid","nucleus","plastid","plastid",null,"plastid","nucleus","nucleus",null,null,"AT4G25990.3"]
["Os02t0308800-01","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15FAS1 domain domain containing protein. (Os02t0308800-01);Conserved hypothetical protein. (Os02t0308800-02)","2",268,{"v":27449.5,"d":"27449.500"},{"v":5.65566,"d":"5.656"},{"v":0.106343,"d":"0.106"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT5G03170.1"]
["Os02t0538700-01","Rice","Harpin-induced 1 domain containing protein. (Os02t0538700-01);Harpin-induced 1 domain containing protein. (Os02t0538700-02)","2",224,{"v":23715.7,"d":"23715.700"},{"v":8.97067,"d":"8.971"},{"v":0.21875,"d":"0.219"},"plasma membrane,cytosol,endoplasmic reticulum","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT5G22200.1"]
["Os03t0118600-02","Rice","Similar to Dihydrodipicolinate reductase-like protein. (Os03t0118600-01);Similar to dihydrodipicolinate reductase. (Os03t0118600-02)","3",335,{"v":36151.1,"d":"36151.100"},{"v":6.50245,"d":"6.502"},{"v":0.240597,"d":"0.241"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus","mitochondrion","cytosol","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT5G52100.1"]
["Os03t0215700-01","Rice","MAP70.4Myosin II heavy chain-like family protein. (Os03t0215700-01)","3",515,{"v":57917.1,"d":"57917.100"},{"v":7.23856,"d":"7.239"},{"v":-0.926214,"d":"-0.926"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G24764.1"]
["Os03t0368900-01","Rice","class III peroxidase 45Haem peroxidase family protein. (Os03t0368900-01)","3",332,{"v":35831.8,"d":"35831.800"},{"v":5.11812,"d":"5.118"},{"v":0.0786145,"d":"0.079"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","msms:extracellular:24083427","24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G05260.1"]
["Os03t0399800-01","Rice","Mannose-binding lectin domain containing protein. (Os03t0399800-01)","3",199,{"v":20838.7,"d":"20838.700"},{"v":5.02878,"d":"5.029"},{"v":0.0437186,"d":"0.044"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","cytosol,plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G19715.1"]
["Os03t0806800-01","Rice","Conserved hypothetical protein. (Os03t0806800-01);Conserved hypothetical protein. (Os03t0806800-02)","3",64,{"v":7670.52,"d":"7670.520"},{"v":11.2522,"d":"11.252"},{"v":-0.360938,"d":"-0.361"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT5G43150.1"]
["Os03t0832800-02","Rice","Similar to glycerol-3-phosphate acyltransferase 1. (Os03t0832800-01);Phospholipid/glycerol acyltransferase domain containing protein. (Os03t0832800-02);Similar to glycerol-3-phosphate acyltransferase 1. (Os03t0832800-03);Similar to glycerol-3-phosphate acyltransferase 1. (Os03t0832800-04);Similar to glycerol-3-phosphate acyltransferase 1. (Os03t0832800-05);Non-protein coding transcript. (Os03t0832800-06)","3",541,{"v":58984.3,"d":"58984.300"},{"v":9.66636,"d":"9.666"},{"v":0.183734,"d":"0.184"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",{"$nulls":3},"mitochondrion","mitochondrion","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT4G01950.1"]
["Os04t0305700-01","Rice","Similar to OSIGBa0096F13.5 protein. (Os04t0305700-01);Similar to OSIGBa0096F13.5 protein. (Os04t0305700-02)","4",494,{"v":51769.6,"d":"51769.600"},{"v":6.11725,"d":"6.117"},{"v":0.214575,"d":"0.215"},"plastid,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"plastid","plastid","golgi",null,null,"AT5G14860.1"]
["Os04t0337500-02","Rice","Aldo/keto reductase family protein. (Os04t0337500-01);Similar to OSIGBa0115A19.1 protein. (Os04t0337500-02)","4",258,{"v":28668.3,"d":"28668.300"},{"v":7.50099,"d":"7.501"},{"v":-0.306977,"d":"-0.307"},"mitochondrion,cytosol","mitochondrion,nucleus,cytosol,vacuole,plastid","nucleus",null,"vacuole","mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT1G60730.1"]
["Os04t0408600-01","Rice","Protein of unknown function DUF662 family protein. (Os04t0408600-01)","4",169,{"v":19393.6,"d":"19393.600"},{"v":9.38012,"d":"9.380"},{"v":-0.805325,"d":"-0.805"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G09980.1"]
["Os04t0466000-01","Rice","Similar to OSIGBa0115M15.3 protein. (Os04t0466000-01)","4",78,{"v":9121.51,"d":"9121.510"},{"v":8.52022,"d":"8.520"},{"v":-0.741026,"d":"-0.741"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT3G05858.1"]
["Os04t0629700-01","Rice","Similar to Kinesin-1 (Kinesin-like protein A). (Os04t0629700-01);Similar to H0303G06.20 protein. (Os04t0629700-02);Similar to H0303G06.20 protein. (Os04t0629700-03)","4",788,{"v":87595.5,"d":"87595.500"},{"v":6.33403,"d":"6.334"},{"v":-0.595305,"d":"-0.595"},"nucleus","cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol",null,null,"plastid",null,"plastid","nucleus","cytosol","msms:nucleus:23777608","23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013","AT4G05190.1"]
["Os04t0629700-02","Rice","Similar to Kinesin-1 (Kinesin-like protein A). (Os04t0629700-01);Similar to H0303G06.20 protein. (Os04t0629700-02);Similar to H0303G06.20 protein. (Os04t0629700-03)","4",812,{"v":90265.6,"d":"90265.600"},{"v":6.83967,"d":"6.840"},{"v":-0.580911,"d":"-0.581"},"cytosol","cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol",null,null,"plastid",null,"plastid",null,"cytosol",null,null,"AT4G05190.1"]
["Os05t0135500-01","Rice","class III peroxidase 71, Peroxidase 63Haem peroxidase family protein. (Os05t0135500-01)","5",344,{"v":36705.6,"d":"36705.600"},{"v":4.65646,"d":"4.656"},{"v":-0.069186,"d":"-0.069"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular","plastid","msms:extracellular:21347307","21347307:Lu:L:Zhou,Saleem A:SA:Bokhari,Chun-Juan:CJ:Dong,Jin-Yuan:JY:Liu:2011","AT1G05260.1"]
["Os05t0408900-01","Rice","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 1Similar to 1-deoxy-D-xylulose-5-phosphate synthase. (Os05t0408900-01);Similar to 1-deoxy-D-xylulose-5-phosphate synthase. (Os05t0408900-02);Similar to 1-D-deoxyxylulose 5-phosphate synthase. (Os05t0408900-03);Similar to 1-D-deoxyxylulose 5-phosphate synthase. (Os05t0408900-04)","5",305,{"v":33016.4,"d":"33016.400"},{"v":10.0805,"d":"10.081"},{"v":-0.378361,"d":"-0.378"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,"plastid","mitochondrion","mitochondrion","plastid","plastid","plastid",null,"plastid","nucleus","plastid",null,null,"AT4G15560.1"]
["Os05t0408900-04","Rice","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 1Similar to 1-deoxy-D-xylulose-5-phosphate synthase. (Os05t0408900-01);Similar to 1-deoxy-D-xylulose-5-phosphate synthase. (Os05t0408900-02);Similar to 1-D-deoxyxylulose 5-phosphate synthase. (Os05t0408900-03);Similar to 1-D-deoxyxylulose 5-phosphate synthase. (Os05t0408900-04)","5",720,{"v":77308.6,"d":"77308.600"},{"v":7.40575,"d":"7.406"},{"v":-0.104444,"d":"-0.104"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","plastid","plastid",null,"plastid","cytosol","plastid",null,null,"AT4G15560.1"]
["Os05t0500000-00","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os05t0500000-00)","5",488,{"v":52733,"d":"52733.000"},{"v":6.25385,"d":"6.254"},{"v":0.039959,"d":"0.040"},"golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","golgi",null,null,"AT2G15480.1"]
["Os05t0589400-01","Rice","R2R3-MYBSimilar to I-box binding factor (Fragment). (Os05t0589400-01);Similar to I-box binding factor (Fragment). (Os05t0589400-02)","5",270,{"v":28494.1,"d":"28494.100"},{"v":8.60708,"d":"8.607"},{"v":-0.53037,"d":"-0.530"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G47390.1"]
["Os06t0118700-01","Rice","Peptidase A1 domain containing protein. (Os06t0118700-01);Peptidase A1 domain containing protein. (Os06t0118700-02)","6",494,{"v":52189.4,"d":"52189.400"},{"v":7.72081,"d":"7.721"},{"v":0.0587045,"d":"0.059"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","vacuole","msms:extracellular:23159799,msms:plastid:27992503","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G79720.1"]
["Os06t0218600-01","Rice","UCLACYANIN-LIKE PROTEIN 16Cupredoxin domain containing protein. (Os06t0218600-01)","6",198,{"v":19543.2,"d":"19543.200"},{"v":8.31938,"d":"8.319"},{"v":0.297475,"d":"0.297"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G72230.1"]
["Os06t0289900-01","Rice","flavone/flavanone C-hexosyltransferaseUDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os06t0289900-01)","6",481,{"v":51485.7,"d":"51485.700"},{"v":6.19842,"d":"6.198"},{"v":0.141164,"d":"0.141"},"plasma membrane","mitochondrion,vacuole,cytosol,plastid","plastid",null,"vacuole","plastid","cytosol","plastid","plastid","plastid",null,"mitochondrion","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G18570.1"]
["Os06t0589500-01","Rice","Conserved hypothetical protein. (Os06t0589500-01)","6",346,{"v":37377.2,"d":"37377.200"},{"v":10.1368,"d":"10.137"},{"v":-0.745087,"d":"-0.745"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","nucleus","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT5G62550.1"]
["Os07t0176600-01","Rice","NIMA-related kinase 3Serine/threonine protein kinase, Never-in-mitosis A (NIMA)-related kinase, Pollen germination (Os07t0176600-01)","7",585,{"v":65806.9,"d":"65806.900"},{"v":9.39756,"d":"9.398"},{"v":-0.497607,"d":"-0.498"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G04810.3"]
["Os07t0510400-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os07t0510400-01);UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os07t0510400-02)","7",482,{"v":51989.8,"d":"51989.800"},{"v":6.19851,"d":"6.199"},{"v":0.00850622,"d":"0.009"},"plasma membrane","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"plastid","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G21800.1"]
["Os07t0567400-01","Rice","Similar to Cytochrome c6. (Os07t0567400-01)","7",113,{"v":11375.7,"d":"11375.700"},{"v":10.7153,"d":"10.715"},{"v":0.227434,"d":"0.227"},"mitochondrion","mitochondrion,plasma membrane,plastid,nucleus","nucleus",null,"mitochondrion","plastid","mitochondrion","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G45040.1"]
["Os08t0238200-02","Rice","Dienelactone hydrolase domain containing protein. (Os08t0238200-01);Similar to Retrotransposon protein Ty1-copia subclass. (Os08t0238200-02)","8",272,{"v":29005,"d":"29005.000"},{"v":7.01659,"d":"7.017"},{"v":0.160294,"d":"0.160"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT3G23570.3"]
["Os08t0489300-02","Rice","TagIMethyladenine glycosylase domain containing protein. (Os08t0489300-01);Similar to GMP synthase. (Os08t0489300-02);Similar to GMP synthase. (Os08t0489300-03)","8",195,{"v":22192.9,"d":"22192.900"},{"v":6.33593,"d":"6.336"},{"v":-0.491282,"d":"-0.491"},"plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","plastid","nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT1G13635.1"]
["Os09t0248100-01","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11FAS1 domain domain containing protein. (Os09t0248100-01);FAS1 domain domain containing protein. (Os09t0248100-02);FAS1 domain domain containing protein. (Os09t0248100-03)","9",401,{"v":42428.6,"d":"42428.600"},{"v":8.19251,"d":"8.193"},{"v":0.0446384,"d":"0.045"},"plasma membrane,extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular",null,null,"AT4G12730.1"]
["Os09t0248100-02","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11FAS1 domain domain containing protein. (Os09t0248100-01);FAS1 domain domain containing protein. (Os09t0248100-02);FAS1 domain domain containing protein. (Os09t0248100-03)","9",401,{"v":42428.6,"d":"42428.600"},{"v":8.19251,"d":"8.193"},{"v":0.0446384,"d":"0.045"},"plasma membrane,extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular","msms:vacuole:18557835,msms:extracellular:24083427,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT4G12730.1"]
["Os09t0459900-02","Rice","KIP-RELATED PROTEIN 6Similar to Cyclin-dependent kinase inhibitor 6. (Os09t0459900-01);Cyclin-dependent kinase inhibitor family protein. (Os09t0459900-02)","9",86,{"v":9274.96,"d":"9274.960"},{"v":8.72627,"d":"8.726"},{"v":-0.447674,"d":"-0.448"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"nucleus","nucleus","plastid","mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT1G49620.1"]
["Os10t0111700-01","Rice","Similar to POT family protein, expressed. (Os10t0111700-01);Similar to POT family protein, expressed. (Os10t0111700-02)","10",572,{"v":62926.4,"d":"62926.400"},{"v":6.36812,"d":"6.368"},{"v":0.388112,"d":"0.388"},"cytosol,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT1G62200.1"]
["Os10t0317900-02","Rice","P-450 75B4Chrysoeriol 5'-Hydroxylase, Flavonoid B-ring hydroxylase, Tricin biosynthesis (Os10t0317900-01);Similar to Flavonoid 3-monooxygenase. (Os10t0317900-02);Non-protein coding transcript. (Os10t0317900-03)","10",328,{"v":36397.1,"d":"36397.100"},{"v":4.92934,"d":"4.929"},{"v":-0.0402439,"d":"-0.040"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum,plastid","cytosol",null,"plastid",null,"cytosol","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G45550.1"]
["Os10t0536500-01","Rice","Peptidase S10, serine carboxypeptidase, active site domain containing protein. (Os10t0536500-01)","10",172,{"v":17950.8,"d":"17950.800"},{"v":8.45449,"d":"8.454"},{"v":0.290116,"d":"0.290"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol","mitochondrion,plasma membrane,nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G46820.1"]
["Os10t0554900-02","Rice","Protein of unknown function DUF566 family protein. (Os10t0554900-01);Protein of unknown function DUF566 domain containing protein. (Os10t0554900-02)","10",208,{"v":22670.6,"d":"22670.600"},{"v":8.90388,"d":"8.904"},{"v":0.0947115,"d":"0.095"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G25190.1"]
["Os11t0559600-01","Rice","Conserved hypothetical protein. (Os11t0559600-01)","11",92,{"v":10018.9,"d":"10018.900"},{"v":10.1154,"d":"10.115"},{"v":-0.341304,"d":"-0.341"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","plastid","mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT5G39710.1"]
["Os11t0592600-01","Rice","Targeting for Xklp2 family protein. (Os11t0592600-01)","11",407,{"v":43699.1,"d":"43699.100"},{"v":4.98164,"d":"4.982"},{"v":-0.938084,"d":"-0.938"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G35880.3"]
["Os11t0654100-01","Rice","NB-ARC domain containing protein. (Os11t0654100-01)","11",927,{"v":105298,"d":"105298.000"},{"v":7.92992,"d":"7.930"},{"v":-0.1,"d":"-0.100"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G07040.1"]
["Os12t0573600-01","Rice","Similar to predicted protein. (Os12t0573600-01)","12",62,{"v":7364.17,"d":"7364.170"},{"v":11.1948,"d":"11.195"},{"v":-0.722581,"d":"-0.723"},"nucleus","mitochondrion,extracellular,plastid,nucleus","nucleus",{"$nulls":3},"extracellular","mitochondrion,plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G39705.1"]
["Os01t0652800-04","Rice","trichome birefringence-like 57Protein of unknown function DUF231, plant domain containing protein. (Os01t0652800-01);Domain of unknown function DUF231, plant domain containing protein. (Os01t0652800-04)","1",56,{"v":6513.1,"d":"6513.100"},{"v":6.20712,"d":"6.207"},{"v":0.0142857,"d":"0.014"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G02440.2"]
["Os01t0914400-01","Rice","Epidermal Patterning Factor like-9Similar to EPIDERMAL PATTERNING FACTOR-like protein 9. (Os01t0914400-01)","1",123,{"v":14009.7,"d":"14009.700"},{"v":7.96381,"d":"7.964"},{"v":-0.421951,"d":"-0.422"},"endoplasmic reticulum,extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT4G12970.1"]
["Os02t0257300-00","Rice","SULFURTRANSFERASE 12Rhodanese-like domain containing protein. (Os02t0257300-00)","2",465,{"v":47175.7,"d":"47175.700"},{"v":4.64996,"d":"4.650"},{"v":-0.108387,"d":"-0.108"},"plastid","extracellular,plastid,nucleus","plastid",null,null,"plastid","plastid","extracellular","plastid","plastid",null,"plastid","plastid","nucleus","msms:plastid:17189339,msms:nucleus:19621931,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G01050.1"]
["Os02t0594700-01","Rice","Similar to Non-phototropic hypocotyl 3. (Os02t0594700-01)","2",190,{"v":20665.5,"d":"20665.500"},{"v":9.51502,"d":"9.515"},{"v":-0.478947,"d":"-0.479"},"mitochondrion,cytosol","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"golgi",null,"mitochondrion","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G67900.1"]
["Os02t0616100-01","Rice","Similar to protein binding protein. (Os02t0616100-01);Similar to protein binding protein. (Os02t0616100-04);Similar to protein binding protein. (Os02t0616100-06);Similar to protein binding protein. (Os02t0616100-07)","2",438,{"v":47288.7,"d":"47288.700"},{"v":7.87195,"d":"7.872"},{"v":-0.0118721,"d":"-0.012"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT4G06744.1"]
["Os02t0616100-04","Rice","Similar to protein binding protein. (Os02t0616100-01);Similar to protein binding protein. (Os02t0616100-04);Similar to protein binding protein. (Os02t0616100-06);Similar to protein binding protein. (Os02t0616100-07)","2",407,{"v":44534.7,"d":"44534.700"},{"v":8.63751,"d":"8.638"},{"v":-0.123342,"d":"-0.123"},"endoplasmic reticulum,extracellular,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT1G49750.1"]
["Os02t0640700-01","Rice","UBX domain containing protein. (Os02t0640700-01)","2",522,{"v":57233.8,"d":"57233.800"},{"v":4.45012,"d":"4.450"},{"v":-0.490421,"d":"-0.490"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT1G14570.2"]
["Os02t0725000-01","Rice","Similar to Protein kinase G11A (EC 2.7.1.-) (Fragment). (Os02t0725000-01)","2",588,{"v":65091.5,"d":"65091.500"},{"v":7.93386,"d":"7.934"},{"v":-0.459864,"d":"-0.460"},"cytosol","mitochondrion,nucleus,cytosol,vacuole,plastid","nucleus",null,"vacuole","plastid","cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT5G47750.1"]
["Os02t0815200-01","Rice","Similar to 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding protein cp29). (Os02t0815200-01)","2",316,{"v":34614,"d":"34614.000"},{"v":4.94125,"d":"4.941"},{"v":-0.412025,"d":"-0.412"},"plastid","plastid,nucleus","plastid",null,"plastid","plastid","nucleus","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G60000.1"]
["Os03t0118200-02","Rice","UAA transporter family protein. (Os03t0118200-01);UAA transporter family protein. (Os03t0118200-02)","3",349,{"v":39311,"d":"39311.000"},{"v":9.4134,"d":"9.413"},{"v":0.431519,"d":"0.432"},"plasma membrane,peroxisome,golgi","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","plastid",{"$nulls":3},"golgi","plastid,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT4G23010.1"]
["Os03t0244000-01","Rice","Heat shock protein DnaJ, cysteine-rich region domain containing protein. (Os03t0244000-01);Heat shock protein DnaJ, cysteine-rich region domain containing protein. (Os03t0244000-02)","3",154,{"v":16315.3,"d":"16315.300"},7.549,{"v":-0.074026,"d":"-0.074"},"plastid","peroxisome,plastid,nucleus","plastid",null,"peroxisome","plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G75690.1"]
["Os03t0582000-01","Rice","Similar to Glutamate formiminotransferase. (Os03t0582000-01);Formiminotransferase, N-terminal domain containing protein. (Os03t0582000-02);Similar to Glutamate formiminotransferase. (Os03t0582000-03)","3",303,{"v":33676.6,"d":"33676.600"},{"v":5.86671,"d":"5.867"},{"v":-0.168317,"d":"-0.168"},"cytosol","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G20830.5"]
["Os03t0592500-01","Rice","LHCB, LHCP II, Lhcb2Similar to Photosystem II type II chlorophyll a/b binding protein (Fragment). (Os03t0592500-01);Similar to Chloroplast chlorophyll a-b binding protein (Fragment). (Os03t0592500-02)","3",263,{"v":28497,"d":"28497.000"},{"v":5.70794,"d":"5.708"},{"v":-0.0874525,"d":"-0.087"},"extracellular","plastid","plastid",null,"plastid",null,"plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:mitochondrion:15069638,msms:plasma membrane:15069638,msms:vacuole:18557835,msms:extracellular:18986194,msms:nucleus:19621931,msms:cytosol:19685898,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT2G05100.1"]
["Os03t0592500-02","Rice","LHCB, LHCP II, Lhcb2Similar to Photosystem II type II chlorophyll a/b binding protein (Fragment). (Os03t0592500-01);Similar to Chloroplast chlorophyll a-b binding protein (Fragment). (Os03t0592500-02)","3",135,{"v":14364.2,"d":"14364.200"},{"v":4.57019,"d":"4.570"},{"v":0.206667,"d":"0.207"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid","plastid","cytosol","plastid",null,"mitochondrion",{"$nulls":3},"plastid",null,null,"AT1G29930.1"]
["Os03t0773700-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 117Similar to Receptor-like protein kinase 2. (Os03t0773700-01)","3",885,{"v":95483,"d":"95483.000"},{"v":6.43677,"d":"6.437"},{"v":-0.0647458,"d":"-0.065"},"plasma membrane","mitochondrion,plasma membrane,nucleus","nucleus",null,null,"mitochondrion","plasma membrane",null,null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT5G65700.1"]
["Os03t0819600-02","Rice","gold hull and internode 1, chalcone isomerase, chalcone flavonone isomeraseChalcone isomerase (EC 5.5.1.6). (Os03t0819600-01);Chalcone isomerase (EC 5.5.1.6). (Os03t0819600-02)","3",233,{"v":23894.3,"d":"23894.300"},{"v":4.93628,"d":"4.936"},{"v":0.205579,"d":"0.206"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G55120.1"]
["Os04t0223300-00","Rice","ASCORBATE PEROXIDASE 3Similar to Peroxisome type ascorbate peroxidase. (Os04t0223300-00)","4",291,{"v":32049.2,"d":"32049.200"},{"v":8.40446,"d":"8.404"},{"v":-0.369072,"d":"-0.369"},"plasma membrane","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"plastid",null,"cytosol","peroxisome",null,"mitochondrion",null,null,"plastid","cytosol","gfp:peroxisome:16397796,msms:plasma membrane:18260611,msms:mitochondrion:19010998,msms:nucleus:19621931,msms:plasma membrane:27800704","16397796:Felipe Karam:FK:Teixeira,Larissa:L:Menezes-Benavente,Vinícius Costa:VC:Galvão,Rogério:R:Margis,Márcia:M:Margis-Pinheiro:2006,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT4G35000.1"]
["Os04t0422000-01","Rice","PAP fibrillin family protein. (Os04t0422000-01);PAP fibrillin family protein. (Os04t0422000-02);Similar to H0525E10.12 protein. (Os04t0422000-03)","4",278,{"v":30618.9,"d":"30618.900"},{"v":9.35579,"d":"9.356"},{"v":-0.202158,"d":"-0.202"},"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","vacuole",null,null,"AT5G09820.2"]
["Os04t0574200-01","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1FAS1 domain domain containing protein. (Os04t0574200-01)","4",431,{"v":44537.8,"d":"44537.800"},{"v":6.63266,"d":"6.633"},{"v":-0.0719258,"d":"-0.072"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:plasma membrane:18260611,msms:extracellular:18372294,msms:extracellular:19038476,msms:extracellular:19226311,msms:extracellular:24083427,msms:extracellular:26194822,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT2G45470.1"]
["Os04t0659100-01","Rice","GRAIN SIZE 2Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-01);Similar to Isoform 2 of Glutamine synthetase, chloroplastic. (Os04t0659100-02);Glutamine synthetase shoot isozyme, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (Clone lambda-GS31). (Os04t0659100-03)","4",428,{"v":46645.3,"d":"46645.300"},{"v":6.27097,"d":"6.271"},{"v":-0.312617,"d":"-0.313"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","plastid","cytosol","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:17189339,msms:extracellular:23159799,gfp:plastid:23257241,msms:plastid:27126603,msms:plasma membrane:27800704,msms:extracellular:28232208","23257241:Lin:L:Xu,Chris:C:Carrie,Simon R:SR:Law,Monika W:MW:Murcha,James:J:Whelan:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,27126603:Yangyang:Y:Wang,Kuixian:K:Ji,Shihua:S:Shen,Hui:H:Chen:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G35630.3"]
["Os05t0215033-01","Rice","Hypothetical gene. (Os05t0215033-01)","5",198,{"v":20466.1,"d":"20466.100"},{"v":7.96011,"d":"7.960"},{"v":-0.0863636,"d":"-0.086"},"cytosol,extracellular,plastid,nucleus","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"plasma membrane","plastid","extracellular","plasma membrane,nucleus",null,"mitochondrion",null,"plastid","nucleus","cytosol"]
["Os05t0217800-01","Rice","BURP domain-containing protein 2BURP domain containing protein. (Os05t0217800-01);Similar to BURP domain-containing protein 2. (Os05t0217800-02)","5",287,{"v":29844,"d":"29844.000"},{"v":7.6213,"d":"7.621"},{"v":0.173171,"d":"0.173"},"extracellular,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT5G25610.1"]
["Os05t0267100-01","Rice","Similar to Transporter-like protein. (Os05t0267100-01);Hypothetical conserved gene. (Os05t0267100-02);Similar to Transporter-like protein. (Os05t0267100-03)","5",81,{"v":9667.84,"d":"9667.840"},{"v":11.1166,"d":"11.117"},{"v":-0.550617,"d":"-0.551"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol",null,"mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G08690.1"]
["Os05t0313700-01","Rice","Conserved hypothetical protein. (Os05t0313700-01)","5",607,{"v":64883.3,"d":"64883.300"},{"v":4.49021,"d":"4.490"},{"v":-0.581219,"d":"-0.581"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT3G27260.4"]
["Os06t0149100-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 75Similar to mRNA, clone: RTFL01-05-E01. (Os06t0149100-01)","6",164,{"v":17729.5,"d":"17729.500"},{"v":6.07171,"d":"6.072"},{"v":-0.170732,"d":"-0.171"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol",null,null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G03820.1"]
["Os06t0705100-01","Rice","Similar to Thylakoid lumenal 13.3 kDa protein (P16.5) (Fragment). (Os06t0705100-01);Similar to Thylakoid lumenal 13.3 kDa protein (P16.5) (Fragment). (Os06t0705100-02);Similar to Thylakoid lumenal 13.3 kDa protein (P16.5) (Fragment). (Os06t0705100-03)","6",239,{"v":24843.4,"d":"24843.400"},{"v":8.85346,"d":"8.853"},{"v":-0.0276151,"d":"-0.028"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid","plastid","plastid","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT4G02530.2"]
["Os07t0148800-01","Rice","Conserved hypothetical protein. (Os07t0148800-01)","7",376,{"v":42572.1,"d":"42572.100"},{"v":7.10365,"d":"7.104"},{"v":-0.370479,"d":"-0.370"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT2G34680.1"]
["Os07t0273700-00","Rice","WRKY GENE 123Disease resistance protein domain containing protein. (Os07t0273700-00)","7",{"v":1339,"d":"1,339"},{"v":151167,"d":"151167.000"},{"v":6.25869,"d":"6.259"},{"v":-0.183794,"d":"-0.184"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G14460.1"]
["Os07t0469100-02","Rice","Similar to Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor. (Os07t0469100-01);Similar to Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor. (Os07t0469100-02)","7",150,{"v":15730.1,"d":"15730.100"},{"v":9.74665,"d":"9.747"},{"v":0.339333,"d":"0.339"},"mitochondrion,plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","mitochondrion","mitochondrion","plasma membrane,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT2G46820.1"]
["Os07t0558400-01","Rice","light-harvesting protein CP29Similar to Chlorophyll a/b-binding protein CP29 precursor. (Os07t0558400-01)","7",290,{"v":31351.2,"d":"31351.200"},{"v":5.15889,"d":"5.159"},{"v":-0.0896552,"d":"-0.090"},"plasma membrane,plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plasma membrane:18260611,msms:plasma membrane:18557835,msms:vacuole:18557835,gfp:plastid:19089317,msms:nucleus:19621931,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","19089317:Chang-Hyo:CH:Goh,Seonghoe:S:Jang,Sera:S:Jung,Ho-Seung:HS:Kim,Hong-Gyu:HG:Kang,Youn-Il:YI:Park,Hyeun-Jong:HJ:Bae,Choon-Hwan:CH:Lee,Gynheung:G:An:2009,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G01530.1"]
["Os08t0106300-00","Rice","Similar to Cytochrome P450. (Os08t0106300-00)","8",297,{"v":34018.3,"d":"34018.300"},{"v":6.51266,"d":"6.513"},{"v":-0.223906,"d":"-0.224"},"cytosol","mitochondrion,endoplasmic reticulum,cytosol,cytoskeleton,plastid","cytosol",null,"plastid","plastid","cytosol","endoplasmic reticulum",null,"mitochondrion",null,null,"cytoskeleton","cytosol",null,null,"AT3G26300.1"]
["Os08t0375400-01","Rice","Plant disease resistance response protein family protein. (Os08t0375400-01)","8",207,{"v":21389.8,"d":"21389.800"},{"v":8.97492,"d":"8.975"},{"v":0.186473,"d":"0.186"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","mitochondrion","nucleus","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT5G42510.1"]
["Os08t0390200-01","Rice","Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os08t0390200-01)","8",418,{"v":44833.2,"d":"44833.200"},{"v":6.51402,"d":"6.514"},{"v":-0.114593,"d":"-0.115"},"mitochondrion,cytosol,peroxisome","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",null,"nucleus","mitochondrion","peroxisome","cytosol",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G06650.2"]
["Os08t0445000-01","Rice","Similar to RING-H2 finger protein ATL5A. (Os08t0445000-01)","8",501,{"v":53824,"d":"53824.000"},{"v":7.0022,"d":"7.002"},{"v":-0.197206,"d":"-0.197"},"plasma membrane,peroxisome,plastid","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"plastid","peroxisome","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT4G30400.1"]
["Os08t0512600-01","Rice","CYCLIN-DEPENDENT KINASE B2;1B-type plant-specific cyclin-dependent kinase, DNA damage response (Os08t0512600-01)","8",326,{"v":36979,"d":"36979.000"},{"v":8.92853,"d":"8.929"},{"v":-0.305521,"d":"-0.306"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G20930.1"]
["Os09t0541000-01","Rice","PLASMA MEMBRANE INTRINSIC PROTEIN 2;7Similar to Aquaporin 2. (Os09t0541000-01);Similar to Plasma membrane intrinsic protein (Aquaporin). (Os09t0541000-02)","9",290,{"v":30318,"d":"30318.000"},{"v":9.21967,"d":"9.220"},{"v":0.601724,"d":"0.602"},"cytosol,plasma membrane,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"nucleus",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT2G16850.1"]
["Os10t0450000-02","Rice","Protein of unknown function DUF247, plant family protein. (Os10t0450000-01);Hypothetical conserved gene. (Os10t0450000-02)","10",396,{"v":43752.8,"d":"43752.800"},{"v":5.43729,"d":"5.437"},{"v":-0.348232,"d":"-0.348"},"mitochondrion,nucleus","mitochondrion,plasma membrane,nucleus","nucleus",{"$nulls":3},"nucleus","plasma membrane",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT3G50140.1"]
["Os10t0478100-01","Rice","Heat shock protein DnaJ, N-terminal domain containing protein. (Os10t0478100-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os10t0478100-02)","10",298,{"v":32618.4,"d":"32618.400"},{"v":9.92597,"d":"9.926"},{"v":-0.00704698,"d":"-0.007"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G08640.1"]
["Os10t0516100-02","Rice","glycine decarboxylase H, H protein of glycine cleavage systemH subunit of glycine decarboxylase complex (GDC), Photorespiration (Os10t0516100-01);Similar to Glycine cleavage system H protein, mitochondrial precursor. (Os10t0516100-02)","10",164,{"v":17368.2,"d":"17368.200"},{"v":4.67873,"d":"4.679"},{"v":-0.228049,"d":"-0.228"},"mitochondrion","mitochondrion,vacuole,plastid","plastid",null,"vacuole","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT1G32470.1"]
["Os11t0267000-02","Rice","Genome uncoupled 4, magnesium chelatase (Mg-chelatase) activating factor, magnesium chelatase accessory protein GUN4, magnesium-chelatase accessory protein GUN4Regulator of the Magnesium-chelatase subunit ChlH activity, Activation of the ChlH subunit of magnesium chelatase, Chlorophyll synthesis (Os11t0267000-02);GUN4-like domain containing protein. (Os11t0267000-03)","11",273,{"v":30772.6,"d":"30772.600"},{"v":5.20412,"d":"5.204"},{"v":-0.616117,"d":"-0.616"},"plastid","plasma membrane,plastid,nucleus","plastid",null,"plastid","plastid","plastid","plasma membrane,nucleus","plastid","plastid",null,"plastid","nucleus","plastid",null,null,"AT3G59400.1"]
["Os11t0308800-01","Rice","Hypothetical conserved gene. (Os11t0308800-01);Hypothetical conserved gene. (Os11t0308800-02)","11",578,{"v":64018,"d":"64018.000"},{"v":8.33466,"d":"8.335"},{"v":0.00484429,"d":"0.005"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G14210.2"]
["Os11t0457000-00","Rice","UDP-glucuronosyl/UDP-glucosyltransferase domain containing protein. (Os11t0457000-00)","11",309,{"v":33408.4,"d":"33408.400"},{"v":12.7029,"d":"12.703"},{"v":-0.81068,"d":"-0.811"},"nucleus,cytosol,golgi","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"vacuole",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","golgi",null,null,"AT2G22590.1"]
["Os01t0111100-01","Rice","CYCLOPHILIN 26-2Cyclophilin-like domain containing protein. (Os01t0111100-01)","1",294,{"v":30388.8,"d":"30388.800"},{"v":9.44775,"d":"9.448"},{"v":0.0469388,"d":"0.047"},"plasma membrane","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","cytosol,nucleus",null,"plastid",null,"plastid","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G74070.1"]
["Os01t0191200-02","Rice","Similar to Acid phosphatase. (Os01t0191200-01);Similar to Acid phosphatase. (Os01t0191200-02)","1",303,{"v":32969.9,"d":"32969.900"},{"v":6.78335,"d":"6.783"},{"v":-0.20165,"d":"-0.202"},"extracellular,golgi","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","mitochondrion,plasma membrane,cytosol,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT2G38600.1"]
["Os01t0329900-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 14Similar to Lipase homolog (Fragment). (Os01t0329900-01);Hypothetical conserved gene. (Os01t0329900-02)","1",436,{"v":45709.4,"d":"45709.400"},{"v":7.72809,"d":"7.728"},{"v":0.0369266,"d":"0.037"},"mitochondrion,plasma membrane,plastid,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","golgi","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT1G09390.1"]
["Os01t0329900-02","Rice","GDSL ESTERASE/LIPASE PROTEIN 14Similar to Lipase homolog (Fragment). (Os01t0329900-01);Hypothetical conserved gene. (Os01t0329900-02)","1",186,{"v":18459.8,"d":"18459.800"},{"v":9.1653,"d":"9.165"},{"v":0.222581,"d":"0.223"},"mitochondrion,plasma membrane,plastid,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT1G09390.1"]
["Os01t0514600-01","Rice","Similar to Fimbrin 1 (AtFIM1). (Os01t0514600-01)","1",695,{"v":76582.4,"d":"76582.400"},{"v":8.45354,"d":"8.454"},{"v":-0.155252,"d":"-0.155"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT5G48460.1"]
["Os01t0716200-02","Rice","IQ calmodulin-binding region domain containing protein. (Os01t0716200-01);Similar to Calmodulin binding protein. (Os01t0716200-02);IQ calmodulin-binding region domain containing protein. (Os01t0716200-03)","1",544,{"v":59964.4,"d":"59964.400"},{"v":10.2546,"d":"10.255"},{"v":-0.715441,"d":"-0.715"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G74690.1"]
["Os01t0799500-02","Rice","TagIMethyladenine glycosylase domain containing protein. (Os01t0799500-01);Hypothetical gene. (Os01t0799500-02)","1",90,{"v":10056,"d":"10056.000"},{"v":10.9343,"d":"10.934"},{"v":-0.455556,"d":"-0.456"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT3G09300.1"]
["Os02t0191800-01","Rice","Conserved hypothetical protein. (Os02t0191800-01)","2",148,{"v":14640.1,"d":"14640.100"},{"v":8.51819,"d":"8.518"},{"v":0.564865,"d":"0.565"},"plasma membrane,extracellular,plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","extracellular","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT4G25760.1"]
["Os02t0236800-01","Rice","class III peroxidase 26Similar to Peroxidase (EC 1.11.1.7). (Os02t0236800-01);Similar to Peroxidase (EC 1.11.1.7). (Os02t0236800-02)","2",326,{"v":33446.8,"d":"33446.800"},{"v":6.97155,"d":"6.972"},{"v":0.230061,"d":"0.230"},"plasma membrane,extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT4G36430.1"]
["Os02t0247100-00","Rice","b-ZIP TRANSCRIPTION FACTOR 19Similar to bZIP transcription factor family protein. (Os02t0247100-00)","2",125,{"v":13102.6,"d":"13102.600"},{"v":5.14723,"d":"5.147"},{"v":0.1192,"d":"0.119"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","plastid","plastid","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT2G42380.3"]
["Os02t0702600-01","Rice","guanine nucleotide exchange factor for Rop 4Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-01);Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-02);Similar to predicted protein. (Os02t0702600-03)","2",543,{"v":60578.9,"d":"60578.900"},{"v":6.09673,"d":"6.097"},{"v":-0.237937,"d":"-0.238"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT1G31650.1"]
["Os02t0702600-03","Rice","guanine nucleotide exchange factor for Rop 4Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-01);Rop nucleotide exchanger, PRONE domain containing protein. (Os02t0702600-02);Similar to predicted protein. (Os02t0702600-03)","2",303,{"v":34229.6,"d":"34229.600"},{"v":8.88488,"d":"8.885"},{"v":-0.191419,"d":"-0.191"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"plasma membrane",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G31650.1"]
["Os03t0123500-02","Rice","HOMEOBOX ORYZA SATIVA 66Similar to HOS66 protein. (Os03t0123500-01);Similar to Homeobox protein knotted-1-like 3. (Os03t0123500-02)","3",314,{"v":34609.1,"d":"34609.100"},{"v":6.05016,"d":"6.050"},{"v":-0.530892,"d":"-0.531"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G62990.1"]
["Os03t0250200-01","Rice","TB2/DP1 and HVA22 related protein family protein. (Os03t0250200-01);Similar to TB2/DP1, HVA22 family protein, expressed. (Os03t0250200-02)","3",250,{"v":28876.1,"d":"28876.100"},{"v":8.08871,"d":"8.089"},{"v":0.2636,"d":"0.264"},"plasma membrane,endoplasmic reticulum","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G75700.1"]
["Os03t0567100-01","Rice","Conserved hypothetical protein. (Os03t0567100-01)","3",115,{"v":12474.6,"d":"12474.600"},{"v":8.75714,"d":"8.757"},{"v":-0.686957,"d":"-0.687"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus","plastid","mitochondrion",null,null,"cytosol","nucleus",null,null,"AT4G21780.2"]
["Os03t0635000-00","Rice","Hypothetical conserved gene. (Os03t0635000-00)","3",523,{"v":54525.4,"d":"54525.400"},{"v":7.98692,"d":"7.987"},{"v":0.143403,"d":"0.143"},"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G42920.2"]
["Os05t0119700-01","Rice","Conserved hypothetical protein. (Os05t0119700-01)","5",100,{"v":11442.3,"d":"11442.300"},{"v":7.61291,"d":"7.613"},-1.715,"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G65010.1"]
["Os05t0353500-01","Rice","Similar to ATP binding protein. (Os05t0353500-01)","5",448,{"v":48055.2,"d":"48055.200"},{"v":6.73711,"d":"6.737"},{"v":-0.195312,"d":"-0.195"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT2G40270.2"]
["Os05t0496200-02","Rice","PHOSPHOGLYCERATE KINASE 3Similar to 3-phosphoglycerate kinase (Fragment). (Os05t0496200-01);Similar to phosphoglycerate kinase. (Os05t0496200-02);Similar to phosphoglycerate kinase. (Os05t0496200-03)","5",316,{"v":32924.6,"d":"32924.600"},{"v":4.43406,"d":"4.434"},{"v":0.235443,"d":"0.235"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G12780.1"]
["Os05t0507000-01","Rice","Similar to JHL23J11.5 protein. (Os05t0507000-01)","5",166,{"v":17046.5,"d":"17046.500"},{"v":5.41926,"d":"5.419"},{"v":0.648795,"d":"0.649"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT5G36710.2"]
["Os05t0563600-01","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6FAS1 domain domain containing protein. (Os05t0563600-01)","5",272,{"v":27953.7,"d":"27953.700"},{"v":10.0736,"d":"10.074"},{"v":0.0669118,"d":"0.067"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:24083427","24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G03870.1"]
["Os06t0473000-01","Rice","Hypothetical conserved gene. (Os06t0473000-01)","6",119,{"v":13166.3,"d":"13166.300"},{"v":3.94418,"d":"3.944"},{"v":-0.289916,"d":"-0.290"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G10710.1"]
["Os06t0483200-01","Rice","oxidosqualene cyclase 6Similar to cycloartenol synthase. (Os06t0483200-01);Similar to Beta-amyrin synthase. (Os06t0483200-02)","6",160,{"v":18577.5,"d":"18577.500"},{"v":10.1504,"d":"10.150"},{"v":-0.44875,"d":"-0.449"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G07050.1"]
["Os06t0610800-02","Rice","Peptidase A1 domain containing protein. (Os06t0610800-01);Similar to Aspartic proteinase nepenthesin-1. (Os06t0610800-02)","6",183,{"v":19513.8,"d":"19513.800"},{"v":7.39699,"d":"7.397"},{"v":0.568852,"d":"0.569"},"mitochondrion,plasma membrane,endoplasmic reticulum,extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,plasma membrane","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane,nucleus",null,"mitochondrion",null,"mitochondrion","extracellular","plasma membrane",null,null,"AT2G24610.1"]
["Os07t0191500-01","Rice","Pentatricopeptide repeat domain containing protein. (Os07t0191500-01)","7",550,{"v":59770.4,"d":"59770.400"},{"v":7.24899,"d":"7.249"},{"v":0.0683636,"d":"0.068"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","nucleus","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G59720.1"]
["Os07t0413800-01","Rice","Conserved hypothetical protein. (Os07t0413800-01);Similar to predicted protein. (Os07t0413800-04)","7",285,{"v":31890.4,"d":"31890.400"},{"v":4.77709,"d":"4.777"},{"v":-0.271579,"d":"-0.272"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","peroxisome,plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G64980.2"]
["Os07t0413800-04","Rice","Conserved hypothetical protein. (Os07t0413800-01);Similar to predicted protein. (Os07t0413800-04)","7",275,{"v":30846.1,"d":"30846.100"},{"v":4.85389,"d":"4.854"},{"v":-0.294909,"d":"-0.295"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",{"$nulls":3},"cytosol","peroxisome,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G64980.2"]
["Os07t0598000-01","Rice","Similar to NADPH HC toxin reductase (Fragment). (Os07t0598000-01);Similar to NADPH HC toxin reductase (Fragment). (Os07t0598000-02)","7",341,{"v":37192.7,"d":"37192.700"},{"v":6.05152,"d":"6.052"},{"v":-0.0313783,"d":"-0.031"},"mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","mitochondrion",null,null,"AT1G61720.1"]
["Os07t0598000-02","Rice","Similar to NADPH HC toxin reductase (Fragment). (Os07t0598000-01);Similar to NADPH HC toxin reductase (Fragment). (Os07t0598000-02)","7",341,{"v":37192.7,"d":"37192.700"},{"v":6.05152,"d":"6.052"},{"v":-0.0313783,"d":"-0.031"},"mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","mitochondrion",null,null,"AT1G61720.1"]
["Os07t0685500-01","Rice","Alpha/beta hydrolase family protein. (Os07t0685500-01)","7",443,{"v":48882.4,"d":"48882.400"},{"v":7.06183,"d":"7.062"},{"v":-0.109932,"d":"-0.110"},"endoplasmic reticulum,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","vacuole",null,null,"AT5G17780.2"]
["Os08t0321000-02","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3FAS1 domain domain containing protein. (Os08t0321000-01);FAS1 domain domain containing protein. (Os08t0321000-02)","8",415,{"v":43655.9,"d":"43655.900"},{"v":8.52376,"d":"8.524"},{"v":-0.0655422,"d":"-0.066"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT4G12730.1"]
["Os09t0427125-00","Rice","Hypothetical conserved gene. (Os09t0427125-00)","9",77,{"v":8865.21,"d":"8865.210"},11.015,{"v":-0.148052,"d":"-0.148"},"mitochondrion","mitochondrion,plastid","plastid",{"$nulls":3},"mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT2G47270.1"]
["Os09t0450300-02","Rice","MAP65/ASE1 family protein. (Os09t0450300-01);MAP65/ASE1 family protein. (Os09t0450300-02);Microtubule-associated protein MAP65-1a. (Os09t0450300-03)","9",595,{"v":67336.1,"d":"67336.100"},{"v":7.52244,"d":"7.522"},{"v":-0.694454,"d":"-0.694"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G01910.1"]
["Os09t0491100-02","Rice","BETA-GLUCOSIDASE 30Similar to Beta-primeverosidase (EC 3.2.1.149). (Os09t0491100-01);Similar to Beta-glucosidase isozyme 2. (Os09t0491100-02);Similar to Beta-glucosidase 30. (Os09t0491100-03)","9",297,{"v":33182.8,"d":"33182.800"},{"v":8.41821,"d":"8.418"},{"v":-0.485522,"d":"-0.486"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"vacuole","vacuole",null,"mitochondrion",{"$nulls":3},"endoplasmic reticulum","msms:plastid:15069638","15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT2G44480.1"]
["Os09t0491100-03","Rice","BETA-GLUCOSIDASE 30Similar to Beta-primeverosidase (EC 3.2.1.149). (Os09t0491100-01);Similar to Beta-glucosidase isozyme 2. (Os09t0491100-02);Similar to Beta-glucosidase 30. (Os09t0491100-03)","9",464,{"v":53170.4,"d":"53170.400"},{"v":7.03781,"d":"7.038"},-0.475,"cytosol","mitochondrion,extracellular,nucleus,cytosol,vacuole","nucleus",null,"extracellular",null,"cytosol","vacuole",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G44480.1"]
["Os09t0555150-01","Rice","Sulfotransferase family protein. (Os09t0555150-01)","9",385,{"v":41708.8,"d":"41708.800"},{"v":6.64113,"d":"6.641"},{"v":-0.182857,"d":"-0.183"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,null,"mitochondrion","cytosol","cytosol","plastid","mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT1G13420.1"]
["Os10t0127900-03","Rice","F-box gene 352, F-box domain protein 352, F-box protein 516Similar to F-box domain containing protein, expressed. (Os10t0127900-01);Similar to F-box domain containing protein, expressed. (Os10t0127900-02);Similar to F-box domain containing protein, expressed. (Os10t0127900-03)","10",424,{"v":48524.9,"d":"48524.900"},{"v":4.7408,"d":"4.741"},{"v":-0.00353774,"d":"-0.004"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G13960.1"]
["Os10t0504600-01","Rice","myosin, SKIP interacting protein 24, SKIPa-interacting protein 24, SKIPa-interacting protein 24Similar to SKIP interacting protein 24 (Fragment). (Os10t0504600-01)","10",282,{"v":32587.2,"d":"32587.200"},{"v":5.24242,"d":"5.242"},{"v":-1.02234,"d":"-1.022"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G52280.1"]
["Os11t0242800-01","Rice","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5Similar to ASCAB9-A (ASCAB9-B) (Fragment). (Os11t0242800-01)","11",283,{"v":30285.3,"d":"30285.300"},{"v":5.3898,"d":"5.390"},{"v":-0.0459364,"d":"-0.046"},"plastid","mitochondrion,peroxisome,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion","peroxisome","mitochondrion","plastid","plastid","msms:plasma membrane:18557835,msms:vacuole:18557835,msms:nucleus:19621931,msms:cytosol:19685898,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT4G10340.1"]
["Os11t0703600-01","Rice","Conserved hypothetical protein. (Os11t0703600-01);Conserved hypothetical protein. (Os11t0703600-02);Hypothetical conserved gene. (Os11t0703600-03)","11",247,{"v":26701.9,"d":"26701.900"},{"v":5.45552,"d":"5.456"},{"v":-0.224292,"d":"-0.224"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT5G59350.3"]
["Os11t0708100-01","Rice","LACCASE 26Similar to Laccase-22. (Os11t0708100-01)","11",284,{"v":30918.9,"d":"30918.900"},{"v":9.21716,"d":"9.217"},{"v":-0.105986,"d":"-0.106"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G38080.1"]
["Os12t0283300-01","Rice","Conserved hypothetical protein. (Os12t0283300-01)","12",214,{"v":23369.9,"d":"23369.900"},{"v":9.74465,"d":"9.745"},{"v":-0.377103,"d":"-0.377"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G18190.1"]
["Os12t0291100-01","Rice","RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment). (Os12t0291100-01);Similar to Ribulose bisphosphate carboxylase small chain. (Os12t0291100-02);Non-protein coding transcript. (Os12t0291100-03)","12",175,{"v":19631.7,"d":"19631.700"},{"v":9.12019,"d":"9.120"},{"v":-0.221143,"d":"-0.221"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:15069638,msms:plastid:15276442,gfp:plastid:16667159,msms:plastid:21433289,msms:plasma membrane:27800704","16667159:M:M:Hahn,V:V:Walbot:1989,15276442:Brian K:BK:Kristensen,Per:P:Askerlund,Natalia V:NV:Bykova,Helge:H:Egsgaard,Ian M:IM:Møller:2004,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G67090.1"]
["Os01t0118300-01","Rice","SHORTENED UPPERMOST INTERNODE 1Similar to Phosphatidyl serine synthase. (Os01t0118300-01);Phosphatidylserine synthase, Regulation of stem development, Control of cell elongation in uppermost internode (Os01t0118300-02)","1",168,{"v":19233.3,"d":"19233.300"},{"v":9.13747,"d":"9.137"},{"v":-0.0494048,"d":"-0.049"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"golgi","plasma membrane,extracellular,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome","gfp:plasma membrane:22956125","22956125:Hengfu:H:Yin,Peng:P:Gao,Chengwu:C:Liu,Jun:J:Yang,Zhongchi:Z:Liu,Da:D:Luo:2013","AT1G15110.3"]
["Os01t0284500-01","Rice","germin-like protein 4, german-like protein 1-2Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]). (Os01t0284500-01)","1",216,{"v":22478.1,"d":"22478.100"},{"v":8.08885,"d":"8.089"},{"v":0.288889,"d":"0.289"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:19038476,msms:extracellular:19226311,msms:extracellular:21255809,msms:extracellular:24083427,msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,21255809:T:T:Shinano,S:S:Komatsu,T:T:Yoshimura,S:S:Tokutake,F-J:FJ:Kong,T:T:Watanabe,J:J:Wasaki,M:M:Osaki:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G02335.1"]
["Os01t0600900-02","Rice","CHLOROPHYLL A/B BINDING PROTEIN 2RChlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP). (Os01t0600900-02);Similar to Chlorophyll a-b binding protein 2, chloroplastic. (Os01t0600900-03)","1",261,{"v":27554,"d":"27554.000"},{"v":5.08526,"d":"5.085"},{"v":0.0904215,"d":"0.090"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","gfp:plastid:19089317,msms:nucleus:19621931,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","19089317:Chang-Hyo:CH:Goh,Seonghoe:S:Jang,Sera:S:Jung,Ho-Seung:HS:Kim,Hong-Gyu:HG:Kang,Youn-Il:YI:Park,Hyeun-Jong:HJ:Bae,Choon-Hwan:CH:Lee,Gynheung:G:An:2009,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT2G34420.1"]
["Os01t0664200-02","Rice","Similar to Ser Thr specific protein kinase-like protein. (Os01t0664200-01);Similar to Ser Thr specific protein kinase-like protein. (Os01t0664200-02)","1",492,{"v":54467.1,"d":"54467.100"},{"v":6.96554,"d":"6.966"},{"v":-0.256301,"d":"-0.256"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","plastid","plasma membrane","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT2G42960.1"]
["Os01t0839200-01","Rice","DUF966-stress repressive gene 2DUF966 family protein, Abiotic stress response (Os01t0839200-01)","1",411,{"v":44528.2,"d":"44528.200"},{"v":9.5379,"d":"9.538"},{"v":-0.673966,"d":"-0.674"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G59790.1"]
["Os01t0919900-01","Rice","fatty-acid desaturase OsSSI2Similar to Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase). (Os01t0919900-01);Similar to Acyl-desaturase. (Os01t0919900-02)","1",400,{"v":45323.1,"d":"45323.100"},{"v":7.06552,"d":"7.066"},-0.432,"plastid","mitochondrion,vacuole,plastid","plastid",null,"vacuole","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","plastid","msms:plastid:17189339,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G43710.2"]
["Os02t0113200-00","Rice","P-450 51H5Similar to Cytochrome P450-like protein. (Os02t0113200-00)","2",483,{"v":54860.8,"d":"54860.800"},{"v":8.77766,"d":"8.778"},{"v":-0.127329,"d":"-0.127"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","endoplasmic reticulum",null,null,"AT1G11680.1"]
["Os02t0203000-00","Rice","b-ZIP TRANSCRIPTION FACTOR 18Similar to transcription factor HY5. (Os02t0203000-00)","2",199,{"v":21363.6,"d":"21363.600"},{"v":10.5103,"d":"10.510"},{"v":-1.18291,"d":"-1.183"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT5G11260.1"]
["Os02t0593500-01","Rice","PHOSPHATE TRANSPORTER 14Phosphate transporter family protein. (Os02t0593500-01);Similar to Phosphate transporter 2-1. (Os02t0593500-02)","2",572,{"v":59204.2,"d":"59204.200"},{"v":9.66577,"d":"9.666"},{"v":0.643531,"d":"0.644"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G26570.2"]
["Os02t0675700-01","Rice","Protein of unknown function DUF248, methyltransferase putative family protein. (Os02t0675700-01)","2",646,{"v":71642.5,"d":"71642.500"},{"v":9.14621,"d":"9.146"},{"v":-0.313932,"d":"-0.314"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G00750.1"]
["Os02t0735800-01","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0735800-01)","2",645,{"v":71681.3,"d":"71681.300"},{"v":7.90215,"d":"7.902"},{"v":-0.0223256,"d":"-0.022"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT1G11290.1"]
["Os03t0102700-01","Rice","BETA-EXPANSIN 7Similar to Expansin-B7. (Os03t0102700-01)","3",279,{"v":29565.4,"d":"29565.400"},{"v":4.58407,"d":"4.584"},{"v":-0.332616,"d":"-0.333"},"plastid","cytosol,extracellular,plastid","plastid",null,"cytosol","plastid","cytosol","extracellular",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G65680.1"]
["Os03t0205700-02","Rice","BTB domain containing protein. (Os03t0205700-01);Photoreceptor-interacting protein-like. (Os03t0205700-02)","3",453,{"v":50606.3,"d":"50606.300"},{"v":7.53161,"d":"7.532"},{"v":-0.119205,"d":"-0.119"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G14820.1"]
["Os03t0412300-01","Rice","Heavy metal transport/detoxification protein domain containing protein. (Os03t0412300-01)","3",248,{"v":25852.9,"d":"25852.900"},{"v":8.69813,"d":"8.698"},{"v":-0.475806,"d":"-0.476"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G16380.1"]
["Os03t0637800-01","Rice","CRINKLY4, rice CRINKLY4 orthologue, CR4 orthologCrinkly4 receptor-like kinase, Epidermal cell differentiation, Interlocking of the palea and lemma (Os03t0637800-01)","3",901,{"v":97777.6,"d":"97777.600"},{"v":6.55825,"d":"6.558"},{"v":-0.0629301,"d":"-0.063"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT3G59420.1"]
["Os03t0679700-02","Rice","HMP-P synthaseSimilar to Thiamine biosynthesis protein thiC. (Os03t0679700-01);Similar to Thiamine biosynthesis protein thiC. (Os03t0679700-02);Similar to Thiamine biosynthesis protein thiC. (Os03t0679700-03);Similar to thiamine biosynthesis protein thiC. (Os03t0679700-04)","3",639,{"v":71299.7,"d":"71299.700"},{"v":6.40576,"d":"6.406"},{"v":-0.391236,"d":"-0.391"},"plastid","cytosol,peroxisome,plastid","cytosol",null,"cytosol","plastid","plastid","plastid","plastid","plastid",null,"plastid","peroxisome","plastid",null,null,"AT2G29630.2"]
["Os03t0701500-01","Rice","GNS1/SUR4 membrane protein family protein. (Os03t0701500-01)","3",279,{"v":30215.1,"d":"30215.100"},{"v":10.0529,"d":"10.053"},{"v":0.589247,"d":"0.589"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","golgi","plastid,golgi","mitochondrion","mitochondrion",null,"mitochondrion","plastid","plasma membrane",null,null,"AT3G06470.1"]
["Os03t0859900-01","Rice","Protein of unknown function DUF547 domain containing protein. (Os03t0859900-01)","3",546,{"v":61658,"d":"61658.000"},{"v":9.92728,"d":"9.927"},{"v":-0.417766,"d":"-0.418"},"nucleus","mitochondrion,plastid,nucleus","plastid",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT5G60720.1"]
["Os04t0233400-02","Rice","PLASMA MEMBRANE INTRINSIC PROTEIN 2;6Similar to Arabidopsis thaliana (Fragment). (Os04t0233400-01);Similar to cDNA clone:006-302-B10, full insert sequence. (Os04t0233400-02)","4",277,{"v":29389.9,"d":"29389.900"},{"v":9.23134,"d":"9.231"},{"v":0.498917,"d":"0.499"},"cytosol,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"nucleus",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT2G16850.1"]
["Os04t0404900-01","Rice","Similar to H0502B11.6 protein. (Os04t0404900-01)","4",447,{"v":49149.9,"d":"49149.900"},{"v":8.89256,"d":"8.893"},{"v":0.382998,"d":"0.383"},"plasma membrane,cytosol,peroxisome","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","peroxisome",null,null,"AT5G47900.1"]
["Os04t0639300-01","Rice","Conserved hypothetical protein. (Os04t0639300-01)","4",173,{"v":18853.8,"d":"18853.800"},{"v":6.10085,"d":"6.101"},{"v":0.101156,"d":"0.101"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","plastid","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT2G21960.1"]
["Os05t0401100-01","Rice","Protein of unknown function DUF477 family protein. (Os05t0401100-01);Protein of unknown function DUF477 family protein. (Os05t0401100-02)","5",299,{"v":31770.7,"d":"31770.700"},{"v":8.85903,"d":"8.859"},{"v":-0.200669,"d":"-0.201"},"plastid","plastid,nucleus","plastid",null,"nucleus","plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:nucleus:19621931,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G54780.1"]
["Os05t0401100-02","Rice","Protein of unknown function DUF477 family protein. (Os05t0401100-01);Protein of unknown function DUF477 family protein. (Os05t0401100-02)","5",299,{"v":31770.7,"d":"31770.700"},{"v":8.85903,"d":"8.859"},{"v":-0.200669,"d":"-0.201"},"plastid","plastid,nucleus","plastid",null,"nucleus","plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G54780.1"]
["Os05t0455700-02","Rice","Phosphoribosyltransferase domain containing protein. (Os05t0455700-01);Phosphoribosyltransferase domain containing protein. (Os05t0455700-02)","5",301,{"v":31630.3,"d":"31630.300"},10.034,{"v":0.0677741,"d":"0.068"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G53900.2"]
["Os05t0568800-01","Rice","Protein of unknown function DUF1645 family protein. (Os05t0568800-01)","5",229,{"v":24151.4,"d":"24151.400"},{"v":8.9219,"d":"8.922"},{"v":-0.507424,"d":"-0.507"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G27880.1"]
["Os06t0336200-02","Rice","TONOPLAST INTRINSIC PROTEIN 2;2Delta-tonoplast intrinsic protein. (Os06t0336200-01);Similar to cDNA clone:001-035-G09, full insert sequence. (Os06t0336200-02)","6",102,{"v":10403,"d":"10403.000"},{"v":10.8983,"d":"10.898"},{"v":-0.0558824,"d":"-0.056"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"vacuole",null,"endoplasmic reticulum","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","msms:plasma membrane:18557835,msms:vacuole:18557835,msms:plasma membrane:27800704,msms:extracellular:28232208,gfp:nucleus:29651780","29651780:Thi Thu Huyen:TTH:Chu,Thi Giang:TG:Hoang,Duy Chi:DC:Trinh,Charlotte:C:Bureau,Donaldo:D:Meynard,Aurore:A:Vernet,Mathieu:M:Ingouff,Nang Vinh:NV:Do,Christophe:C:Périn,Emmanuel:E:Guiderdoni,Pascal:P:Gantet,Christophe:C:Maurel,Doan-Trung:DT:Luu:2018,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G16240.1"]
["Os06t0664200-02","Rice","Inositol monophosphatase/Fructose-1,6-bisphosphatase domain containing protein. (Os06t0664200-01);Hypothetical gene. (Os06t0664200-02)","6",83,{"v":9266.25,"d":"9266.250"},{"v":7.5437,"d":"7.544"},{"v":0.1,"d":"0.100"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G26940.1"]
["Os06t0725200-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 90Lipase, GDSL domain containing protein. (Os06t0725200-01)","6",368,{"v":38769.8,"d":"38769.800"},{"v":9.18302,"d":"9.183"},{"v":0.178261,"d":"0.178"},"vacuole,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","vacuole",null,null,"AT5G55050.1"]
["Os07t0674400-01","Rice","Pollen Ole e 1 allergen/extensin domain containing protein. (Os07t0674400-01)","7",140,{"v":14126.5,"d":"14126.500"},{"v":7.85485,"d":"7.855"},{"v":0.782143,"d":"0.782"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:26072143","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015","AT3G16660.2"]
["Os08t0270500-01","Rice","Conserved hypothetical protein. (Os08t0270500-01);Conserved hypothetical protein. (Os08t0270500-02)","8",40,{"v":4547.42,"d":"4547.420"},{"v":6.50863,"d":"6.509"},{"v":-0.4925,"d":"-0.493"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol"]
["Os08t0371200-01","Rice","Carotenoid oxygenase domain containing protein. (Os08t0371200-01)","8",144,{"v":15639.8,"d":"15639.800"},{"v":10.0183,"d":"10.018"},-0.175,"plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,"cytosol","plastid","peroxisome","plastid","plastid","plastid",null,"plastid","mitochondrion","plastid",null,null,"AT4G18350.1"]
["Os08t0382400-03","Rice","CYCLOPHILIN 38Peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain containing protein. (Os08t0382400-01);Similar to Peptidyl-prolyl cis-trans isomerase (Fragment). (Os08t0382400-02);Similar to Peptidyl-prolyl cis-trans isomerase (Fragment). (Os08t0382400-03)","8",40,{"v":4299,"d":"4299.000"},{"v":3.70982,"d":"3.710"},0.025,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G01480.1"]
["Os09t0361500-01","Rice","isochorismate synthase 1Isochorismate synthase domain containing protein. (Os09t0361500-01)","9",377,{"v":40314.9,"d":"40314.900"},{"v":8.48218,"d":"8.482"},{"v":-0.111936,"d":"-0.112"},"plastid","vacuole,plastid,nucleus","plastid",null,"vacuole","plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G74710.1"]
["Os09t0511900-01","Rice","BETA-GLUCOSIDASE 33Similar to Beta-glucosidase 32. (Os09t0511900-01)","9",503,{"v":56845,"d":"56845.000"},{"v":5.79115,"d":"5.791"},{"v":-0.26839,"d":"-0.268"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum",null,null,"AT1G02850.1"]
["Os10t0531900-01","Rice","b-ZIP TRANSCRIPTION FACTOR 78Similar to BZIP-like protein. (Os10t0531900-01)","10",400,{"v":43176.8,"d":"43176.800"},{"v":7.28602,"d":"7.286"},{"v":-0.7235,"d":"-0.724"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT4G38900.3"]
["Os11t0127800-01","Rice","Similar to FHA domain containing protein, expressed. (Os11t0127800-01);Similar to FHA domain containing protein, expressed. (Os11t0127800-02)","11",261,{"v":28027.9,"d":"28027.900"},{"v":7.55036,"d":"7.550"},{"v":-0.372414,"d":"-0.372"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"plastid",null,null,"AT2G21530.1"]
["Os11t0302800-01","Rice","Protein of unknown function DUF724 family protein. (Os11t0302800-01)","11",785,{"v":86899.8,"d":"86899.800"},{"v":5.07264,"d":"5.073"},{"v":-0.474777,"d":"-0.475"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G62300.2"]
["Os11t0683500-01","Rice","BETA-GLUCOSIDASE 36Hypothetical conserved gene. (Os11t0683500-01);Glycoside hydrolase, family 1 protein. (Os11t0683500-02)","11",298,{"v":33164.1,"d":"33164.100"},{"v":4.97564,"d":"4.976"},{"v":-0.307718,"d":"-0.308"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","vacuole,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","mitochondrion","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G06510.2"]
["Os12t0501900-01","Rice","Similar to 10A19I.7. (Os12t0501900-01)","12",143,{"v":15169.6,"d":"15169.600"},{"v":9.75399,"d":"9.754"},{"v":-0.734266,"d":"-0.734"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,"plastid",null,"mitochondrion","plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G61600.1"]
["Os12t0541500-01","Rice","Similar to Elongation factor Ts. (Os12t0541500-01);Similar to Chloroplast polyprotein of elongation factor Ts. (Os12t0541500-02);Similar to Elongation factor Ts. (Os12t0541500-03);Similar to Elongation factor Ts. (Os12t0541500-04);Similar to Elongation factor Ts. (Os12t0541500-05)","12",687,{"v":72649.8,"d":"72649.800"},{"v":4.06848,"d":"4.068"},{"v":-0.477875,"d":"-0.478"},"mitochondrion,plasma membrane","cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"nucleus","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:mitochondrion:15069638,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT4G29060.2"]
["Os12t0541500-04","Rice","Similar to Elongation factor Ts. (Os12t0541500-01);Similar to Chloroplast polyprotein of elongation factor Ts. (Os12t0541500-02);Similar to Elongation factor Ts. (Os12t0541500-03);Similar to Elongation factor Ts. (Os12t0541500-04);Similar to Elongation factor Ts. (Os12t0541500-05)","12",375,{"v":42127.6,"d":"42127.600"},{"v":4.80942,"d":"4.809"},{"v":-0.472533,"d":"-0.473"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","mitochondrion",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G29060.1"]
["Os12t0550800-05","Rice","Hypothetical conserved gene. (Os12t0550800-01);Conserved hypothetical protein. (Os12t0550800-02);Conserved hypothetical protein. (Os12t0550800-05);Non-protein coding transcript. (Os12t0550800-06)","12",74,{"v":8827.55,"d":"8827.550"},{"v":12.4446,"d":"12.445"},{"v":-1.01081,"d":"-1.011"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT1G80150.2"]
["Os01t0144100-01","Rice","Similar to Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15). (Os01t0144100-01)","1",198,{"v":20575.2,"d":"20575.200"},{"v":7.41396,"d":"7.414"},{"v":-0.0752525,"d":"-0.075"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G44920.2"]
["Os01t0180300-01","Rice","Lipoprotein, type 6 family protein. (Os01t0180300-01);Hypothetical conserved gene. (Os01t0180300-02)","1",766,{"v":84135.6,"d":"84135.600"},{"v":4.69583,"d":"4.696"},{"v":-0.688381,"d":"-0.688"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus","mitochondrion","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G16000.1"]
["Os01t0352100-01","Rice","2OG-Fe(II) oxygenase domain containing protein. (Os01t0352100-01)","1",350,{"v":38669.3,"d":"38669.300"},{"v":4.93151,"d":"4.932"},{"v":-0.187714,"d":"-0.188"},"cytosol","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",null,null,"plastid","peroxisome","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT1G17010.1"]
["Os01t0639900-01","Rice","BETA-CARBONIC ANHYDRASE 1beta-carbonic anhydrase (EC:4.2.1.1), Carbon assimilation, CO<sub>2</sub>-mediated stomatal pore response (Os01t0639900-01)","1",272,{"v":29118.9,"d":"29118.900"},{"v":8.27586,"d":"8.276"},{"v":-0.0136029,"d":"-0.014"},"extracellular,nucleus","vacuole,plastid","plastid",null,"vacuole","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:nucleus:19621931,msms:extracellular:23159799,msms:nucleus:24133045,msms:plasma membrane:27800704,msms:extracellular:28232208","24133045:Dinesh Kumar:DK:Jaiswal,Doel:D:Ray,Mani Kant:MK:Choudhary,Pratigya:P:Subba,Amit:A:Kumar,Jitendra:J:Verma,Rajiv:R:Kumar,Asis:A:Datta,Subhra:S:Chakraborty,Niranjan:N:Chakraborty:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G14740.6"]
["Os01t0717400-01","Rice","EGF-like, alliinase domain containing protein. (Os01t0717400-01)","1",485,{"v":53057.6,"d":"53057.600"},{"v":6.40436,"d":"6.404"},{"v":-0.16268,"d":"-0.163"},"plasma membrane,vacuole","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","plastid",null,"vacuole","mitochondrion","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G34060.1"]
["Os01t0875300-00","Rice","Similar to Universal stress protein family protein. (Os01t0875300-00)","1",314,{"v":32899.6,"d":"32899.600"},{"v":9.47325,"d":"9.473"},{"v":0.0242038,"d":"0.024"},"nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus",null,"plastid",null,"plastid",null,"plastid","msms:nucleus:19321431","19321431:Mani Kant:MK:Choudhary,Debarati:D:Basu,Asis:A:Datta,Niranjan:N:Chakraborty,Subhra:S:Chakraborty:2009","AT1G44760.2"]
["Os02t0103850-00","Rice","Hypothetical protein. (Os02t0103850-00)","2",367,{"v":40055.5,"d":"40055.500"},{"v":7.27187,"d":"7.272"},{"v":-0.110627,"d":"-0.111"},"extracellular,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi",null,null,"AT2G39010.2"]
["Os02t0740400-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 44Similar to GSDL-motif lipase. (Os02t0740400-01);Lipase, GDSL domain containing protein. (Os02t0740400-02)","2",102,{"v":10952.3,"d":"10952.300"},{"v":8.48535,"d":"8.485"},{"v":0.377451,"d":"0.377"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT5G08460.1"]
["Os02t0833900-01","Rice","class III peroxidase 32Similar to Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a). (Os02t0833900-01);Similar to Class III peroxidase 32. (Os02t0833900-02);Similar to Class III peroxidase 32. (Os02t0833900-03)","2",288,{"v":30392.5,"d":"30392.500"},{"v":7.50165,"d":"7.502"},{"v":0.129167,"d":"0.129"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT5G42180.1"]
["Os02t0834700-02","Rice","Similar to Cell division inhibitor. (Os02t0834700-01);Similar to cDNA clone:J013124G04, full insert sequence. (Os02t0834700-02)","2",81,{"v":8943.41,"d":"8943.410"},{"v":6.7851,"d":"6.785"},{"v":-0.353086,"d":"-0.353"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","plasma membrane,plastid,nucleus","plastid","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G21280.2"]
["Os03t0129300-02","Rice","glyceraldehyde-3-phosphate dehydrogenase, chloroplastic glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic GAPDH B subunitSimilar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) (Fragment). (Os03t0129300-01);Similar to cDNA clone:J013118G18, full insert sequence. (Os03t0129300-02)","3",218,{"v":23228.6,"d":"23228.600"},{"v":4.72048,"d":"4.720"},{"v":0.0366972,"d":"0.037"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G42970.1"]
["Os03t0261500-01","Rice","DnaJ domain protein C26Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0261500-01);Similar to dnaJ subfamily C member 8. (Os03t0261500-02)","3",298,{"v":34571.3,"d":"34571.300"},{"v":10.1961,"d":"10.196"},{"v":-1.06309,"d":"-1.063"},"plastid,nucleus","mitochondrion,nucleus,cytosol,golgi,plastid","nucleus",null,"cytosol","mitochondrion","nucleus","nucleus,golgi",null,"plastid",null,"plastid","plastid","nucleus",null,null,"AT5G22080.1"]
["Os03t0261500-02","Rice","DnaJ domain protein C26Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0261500-01);Similar to dnaJ subfamily C member 8. (Os03t0261500-02)","3",246,{"v":29238.9,"d":"29238.900"},{"v":9.88155,"d":"9.882"},{"v":-1.24106,"d":"-1.241"},"nucleus","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"cytosol",null,"nucleus","nucleus,golgi",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G22080.1"]
["Os03t0666800-01","Rice","Conserved hypothetical protein. (Os03t0666800-01)","3",81,{"v":9309.2,"d":"9309.200"},{"v":9.17181,"d":"9.172"},{"v":-0.785185,"d":"-0.785"},"mitochondrion","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"extracellular","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT4G26280.1"]
["Os04t0119000-02","Rice","Similar to H0716A07.5 protein. (Os04t0119000-01);Similar to H0716A07.5 protein. (Os04t0119000-02)","4",82,{"v":8576.62,"d":"8576.620"},{"v":10.3307,"d":"10.331"},{"v":0.271951,"d":"0.272"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT1G32928.1"]
["Os04t0234600-01","Rice","Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-01);Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-02);Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-03)","4",392,{"v":42247.3,"d":"42247.300"},{"v":5.8838,"d":"5.884"},{"v":-0.152296,"d":"-0.152"},"plastid","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G55800.1"]
["Os04t0293100-01","Rice","Hypothetical protein. (Os04t0293100-01)","4",84,{"v":8565.99,"d":"8565.990"},{"v":6.91393,"d":"6.914"},{"v":-0.296429,"d":"-0.296"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G09630.1"]
["Os04t0690500-03","Rice","Similar to CAA30371.1 protein (Fragment). (Os04t0690500-01);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-02);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-03);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-04)","4",227,{"v":24691.5,"d":"24691.500"},{"v":11.0585,"d":"11.059"},{"v":-0.539648,"d":"-0.540"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21830.1"]
["Os05t0168800-01","Rice","KIP1-like domain containing protein. (Os05t0168800-01);KIP1-like domain containing protein. (Os05t0168800-02);Similar to CENP-E like kinetochore protein. (Os05t0168800-03)","5",624,{"v":70709.9,"d":"70709.900"},{"v":4.48097,"d":"4.481"},{"v":-0.720994,"d":"-0.721"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G58320.2"]
["Os05t0226300-01","Rice","Similar to FIP1. (Os05t0226300-01)","5",196,{"v":20417,"d":"20417.000"},{"v":9.22488,"d":"9.225"},{"v":-0.490306,"d":"-0.490"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT4G33630.1"]
["Os05t0291700-01","Rice","Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)","5",338,{"v":35577.4,"d":"35577.400"},{"v":8.04474,"d":"8.045"},{"v":-0.0056213,"d":"-0.006"},"plastid","cytosol,peroxisome,extracellular,plastid","plastid",null,null,"plastid","plastid","cytosol,extracellular,plastid","plastid","plastid","peroxisome","plastid","plastid","plastid",null,null,"AT3G46780.1"]
["Os05t0292800-01","Rice","Similar to One helix protein (OHP). (Os05t0292800-01)","5",112,{"v":12110.3,"d":"12110.300"},{"v":11.1886,"d":"11.189"},{"v":0.310714,"d":"0.311"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G02120.1"]
["Os05t0460500-00","Rice","Hypothetical gene. (Os05t0460500-00)","5",153,{"v":15798.6,"d":"15798.600"},{"v":4.01069,"d":"4.011"},{"v":0.319608,"d":"0.320"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol"]
["Os05t0585400-01","Rice","Similar to Protein ABIL1. (Os05t0585400-01)","5",302,{"v":33275.8,"d":"33275.800"},{"v":10.4367,"d":"10.437"},{"v":-0.595695,"d":"-0.596"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G46225.1"]
["Os06t0573600-01","Rice","BETA-GALACTOSIDASE 2Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os06t0573600-01);Similar to Beta-galactosidase. (Os06t0573600-02);Similar to Beta-galactosidase. (Os06t0573600-03)","6",715,{"v":78284.2,"d":"78284.200"},{"v":7.72199,"d":"7.722"},{"v":-0.236224,"d":"-0.236"},"plasma membrane,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT3G13750.1"]
["Os06t0729650-00","Rice","Similar to Photosystem II stability/assembly factor HCF136, chloroplastic. (Os06t0729650-00)","6",394,{"v":42853.6,"d":"42853.600"},{"v":9.35811,"d":"9.358"},{"v":-0.232234,"d":"-0.232"},"plastid","mitochondrion,plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G23120.2"]
["Os07t0424400-02","Rice","CELLULOSE SYNTHASE A3Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)","7",890,{"v":100749,"d":"100749.000"},{"v":7.58388,"d":"7.584"},{"v":-0.435506,"d":"-0.436"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT2G21770.1"]
["Os07t0424400-03","Rice","CELLULOSE SYNTHASE A3Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)","7",837,{"v":95075.4,"d":"95075.400"},{"v":8.4207,"d":"8.421"},{"v":-0.0483871,"d":"-0.048"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,null,"mitochondrion","plasma membrane","plastid,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT2G21770.1"]
["Os07t0424400-06","Rice","CELLULOSE SYNTHASE A3Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)","7",{"v":1093,"d":"1,093"},{"v":123509,"d":"123509.000"},{"v":7.09755,"d":"7.098"},{"v":-0.248124,"d":"-0.248"},"cytosol","mitochondrion,cytosol,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT5G64740.1"]
["Os07t0505200-01","Rice","RICE SQUAMOSA PROMOTER-BINDING-LIKE 13, Squamosa promoter-binding-like protein 13Plant-specific transcription factor, Control of grain size (Os07t0505200-01)","7",216,{"v":22045.5,"d":"22045.500"},{"v":10.8357,"d":"10.836"},{"v":-0.679167,"d":"-0.679"},"nucleus","mitochondrion,plastid,nucleus","nucleus","plastid",null,"mitochondrion","nucleus",null,null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G53160.3"]
["Os07t0664500-01","Rice","NAD(P)-binding domain containing protein. (Os07t0664500-01)","7",307,{"v":31953.6,"d":"31953.600"},{"v":7.89566,"d":"7.896"},{"v":0.248208,"d":"0.248"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G26760.1"]
["Os08t0402700-01","Rice","Similar to 10A19I.7. (Os08t0402700-01)","8",131,{"v":14203,"d":"14203.000"},{"v":7.85295,"d":"7.853"},{"v":-0.252672,"d":"-0.253"},"mitochondrion","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT1G20720.1"]
["Os08t0473900-03","Rice","ALPHA-AMYLASE 3DAlpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473900-01);Similar to Alpha amylase isozyme 3D. (Os08t0473900-02);Similar to Alpha amylase isozyme 3D. (Os08t0473900-03)","8",356,{"v":39027.3,"d":"39027.300"},{"v":5.85228,"d":"5.852"},{"v":-0.244944,"d":"-0.245"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:19038476,msms:golgi:25047511","19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G69830.1"]
["Os09t0116900-01","Rice","Conserved hypothetical protein. (Os09t0116900-01)","9",95,{"v":9979.04,"d":"9979.040"},{"v":11.3607,"d":"11.361"},{"v":-0.466316,"d":"-0.466"},"vacuole,extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","vacuole",null,null,"AT2G16440.1"]
["Os09t0423300-01","Rice","Pentatricopeptide repeat domain containing protein. (Os09t0423300-01);Similar to pentatricopeptide (PPR) repeat-containing protein. (Os09t0423300-02);Hypothetical conserved gene. (Os09t0423300-03)","9",962,{"v":106908,"d":"106908.000"},{"v":7.48195,"d":"7.482"},{"v":-0.131289,"d":"-0.131"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G30825.1"]
["Os09t0423300-02","Rice","Pentatricopeptide repeat domain containing protein. (Os09t0423300-01);Similar to pentatricopeptide (PPR) repeat-containing protein. (Os09t0423300-02);Hypothetical conserved gene. (Os09t0423300-03)","9",784,{"v":88595.7,"d":"88595.700"},{"v":6.2214,"d":"6.221"},{"v":-0.0622449,"d":"-0.062"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G30825.1"]
["Os09t0537700-02","Rice","RIBONUCLEASE 4S-like ribonuclease, Salinity tolerance, Abiotic stress response, Regulation of photomorphogenesis (Os09t0537700-02)","9",252,{"v":28399.8,"d":"28399.800"},{"v":5.06971,"d":"5.070"},{"v":-0.159127,"d":"-0.159"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","extracellular","msms:extracellular:23159799,msms:extracellular:28232208","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G26820.1"]
["Os10t0109900-00","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os10t0109900-00)","10",569,{"v":61445.5,"d":"61445.500"},{"v":6.94148,"d":"6.941"},{"v":0.346924,"d":"0.347"},"plasma membrane","mitochondrion,nucleus,cytosol,vacuole,plasma membrane","nucleus",null,"vacuole",null,"cytosol","vacuole",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT1G62200.1"]
["Os10t0213700-01","Rice","Similar to P-166-4_1 (Fragment). (Os10t0213700-01)","10",163,{"v":16140.4,"d":"16140.400"},{"v":8.49142,"d":"8.491"},{"v":0.447239,"d":"0.447"},"plastid","plasma membrane,plastid","plastid",null,null,"plastid","plastid","plasma membrane","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G50685.1"]
["Os10t0427900-02","Rice","Conserved hypothetical protein. (Os10t0427900-01);Hypothetical conserved gene. (Os10t0427900-02)","10",42,{"v":4381.1,"d":"4381.100"},{"v":8.83371,"d":"8.834"},{"v":-0.716667,"d":"-0.717"},"cytosol,nucleus","cytosol,plasma membrane,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"plastid",{"$nulls":3},"nucleus",null,null,"AT1G63430.2"]
["Os11t0116000-01","Rice","non-specific lipid transfer protein 1.12, lipid transfer protein 1.12, type 1 non-specific lipid transfer protein 12Similar to Nonspecific lipid-transfer protein 1 (LTP 1) (Major allergen Pru d 3). (Os11t0116000-01);Non-protein coding transcript. (Os11t0116000-02)","11",118,{"v":11441.2,"d":"11441.200"},{"v":9.28055,"d":"9.281"},{"v":0.633051,"d":"0.633"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:nucleus:19621931,msms:extracellular:28232208","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G59320.1"]
["Os11t0707000-01","Rice","Rubisco activase, the small isoform of rice Rubisco activase, Rubisco activase small isoform, \"ribulose-1, 5-bisphosphate carboxylase/oxygenase activase\", Rubisco activase II, Rubisco activase large isoform, Rubisco activase I, Rubisco-A, RuBisCO activase A1Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-01);Ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) (Fragments). (Os11t0707000-02);Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-03);Non-protein coding transcript. (Os11t0707000-04)","11",153,{"v":16952.1,"d":"16952.100"},10.647,{"v":-0.852941,"d":"-0.853"},"plastid","cytosol,plastid,nucleus","nucleus",null,"plastid","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:15069638,msms:plastid:17189339,msms:nucleus:19621931,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT2G39730.1"]
["Os12t0503000-01","Rice","Similar to Allantoin permease. (Os12t0503000-01);Similar to Ureide permease 4. (Os12t0503000-03);Similar to Ureide permease 4. (Os12t0503000-04);Similar to Allantoin permease. (Os12t0503000-05)","12",418,{"v":45233,"d":"45233.000"},{"v":5.34451,"d":"5.345"},{"v":0.406938,"d":"0.407"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT2G03530.1"]
["Os12t0503000-03","Rice","Similar to Allantoin permease. (Os12t0503000-01);Similar to Ureide permease 4. (Os12t0503000-03);Similar to Ureide permease 4. (Os12t0503000-04);Similar to Allantoin permease. (Os12t0503000-05)","12",367,{"v":40057.4,"d":"40057.400"},{"v":5.33802,"d":"5.338"},{"v":0.229428,"d":"0.229"},"plasma membrane,endoplasmic reticulum","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT1G26440.2"]
["Os12t0548700-01","Rice","Similar to MPI. (Os12t0548700-01)","12",68,{"v":7268.81,"d":"7268.810"},{"v":4.63256,"d":"4.633"},-0.025,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","plastid",null,"mitochondrion",null,null,"extracellular","cytosol",null,null,"AT2G38870.1"]
["Os01t0144100-01","Rice","Similar to Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15). (Os01t0144100-01)","1",198,{"v":20575.2,"d":"20575.200"},{"v":7.41396,"d":"7.414"},{"v":-0.0752525,"d":"-0.075"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G44920.2"]
["Os01t0180300-01","Rice","Lipoprotein, type 6 family protein. (Os01t0180300-01);Hypothetical conserved gene. (Os01t0180300-02)","1",766,{"v":84135.6,"d":"84135.600"},{"v":4.69583,"d":"4.696"},{"v":-0.688381,"d":"-0.688"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus","mitochondrion","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G16000.1"]
["Os01t0352100-01","Rice","2OG-Fe(II) oxygenase domain containing protein. (Os01t0352100-01)","1",350,{"v":38669.3,"d":"38669.300"},{"v":4.93151,"d":"4.932"},{"v":-0.187714,"d":"-0.188"},"cytosol","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",null,null,"plastid","peroxisome","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT1G17010.1"]
["Os01t0717400-01","Rice","EGF-like, alliinase domain containing protein. (Os01t0717400-01)","1",485,{"v":53057.6,"d":"53057.600"},{"v":6.40436,"d":"6.404"},{"v":-0.16268,"d":"-0.163"},"plasma membrane,vacuole","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","plastid",null,"vacuole","mitochondrion","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G34060.1"]
["Os01t0760000-01","Rice","Similar to Dynein light chain. (Os01t0760000-01)","1",82,{"v":9164.17,"d":"9164.170"},{"v":8.51233,"d":"8.512"},{"v":-0.140244,"d":"-0.140"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G52245.1"]
["Os02t0103850-00","Rice","Hypothetical protein. (Os02t0103850-00)","2",367,{"v":40055.5,"d":"40055.500"},{"v":7.27187,"d":"7.272"},{"v":-0.110627,"d":"-0.111"},"extracellular,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi",null,null,"AT2G39010.2"]
["Os02t0110200-01","Rice","HYDROPEROXIDE LYASE 3Fatty acid 13-hydroperoxide lyase (CYP74B), Plant defense (Os02t0110200-01);Similar to Hydroperoxide lyase. (Os02t0110200-02)","2",487,{"v":53713.6,"d":"53713.600"},{"v":5.5743,"d":"5.574"},{"v":-0.0285421,"d":"-0.029"},"plastid","mitochondrion,cytosol,endoplasmic reticulum,plastid","plastid",null,null,"plastid","cytosol","endoplasmic reticulum","plastid","mitochondrion",null,null,"plastid","plastid","gfp:plastid:16531481,msms:plasma membrane:27800704","16531481:E W:EW:Chehab,G:G:Raman,J W:JW:Walley,J V:JV:Perea,G:G:Banu,S:S:Theg,K:K:Dehesh:2006,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G15440.1"]
["Os02t0740400-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 44Similar to GSDL-motif lipase. (Os02t0740400-01);Lipase, GDSL domain containing protein. (Os02t0740400-02)","2",102,{"v":10952.3,"d":"10952.300"},{"v":8.48535,"d":"8.485"},{"v":0.377451,"d":"0.377"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT5G08460.1"]
["Os02t0833900-01","Rice","class III peroxidase 32Similar to Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a). (Os02t0833900-01);Similar to Class III peroxidase 32. (Os02t0833900-02);Similar to Class III peroxidase 32. (Os02t0833900-03)","2",288,{"v":30392.5,"d":"30392.500"},{"v":7.50165,"d":"7.502"},{"v":0.129167,"d":"0.129"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT5G42180.1"]
["Os02t0834700-02","Rice","Similar to Cell division inhibitor. (Os02t0834700-01);Similar to cDNA clone:J013124G04, full insert sequence. (Os02t0834700-02)","2",81,{"v":8943.41,"d":"8943.410"},{"v":6.7851,"d":"6.785"},{"v":-0.353086,"d":"-0.353"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","plasma membrane,plastid,nucleus","plastid","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G21280.2"]
["Os03t0129300-02","Rice","glyceraldehyde-3-phosphate dehydrogenase, chloroplastic glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic GAPDH B subunitSimilar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) (Fragment). (Os03t0129300-01);Similar to cDNA clone:J013118G18, full insert sequence. (Os03t0129300-02)","3",218,{"v":23228.6,"d":"23228.600"},{"v":4.72048,"d":"4.720"},{"v":0.0366972,"d":"0.037"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G42970.1"]
["Os03t0261500-02","Rice","DnaJ domain protein C26Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0261500-01);Similar to dnaJ subfamily C member 8. (Os03t0261500-02)","3",246,{"v":29238.9,"d":"29238.900"},{"v":9.88155,"d":"9.882"},{"v":-1.24106,"d":"-1.241"},"nucleus","mitochondrion,nucleus,cytosol,golgi","nucleus",null,"cytosol",null,"nucleus","nucleus,golgi",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G22080.1"]
["Os03t0666800-01","Rice","Conserved hypothetical protein. (Os03t0666800-01)","3",81,{"v":9309.2,"d":"9309.200"},{"v":9.17181,"d":"9.172"},{"v":-0.785185,"d":"-0.785"},"mitochondrion","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"extracellular","nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT4G26280.1"]
["Os03t0781400-02","Rice","Ribose 5-phosphate isomerase family protein. (Os03t0781400-01);Similar to ribose-5-phosphate isomerase. (Os03t0781400-02)","3",131,{"v":13502.2,"d":"13502.200"},{"v":11.7172,"d":"11.717"},{"v":-0.00458015,"d":"-0.005"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G44520.2"]
["Os04t0119000-01","Rice","Similar to H0716A07.5 protein. (Os04t0119000-01);Similar to H0716A07.5 protein. (Os04t0119000-02)","4",82,{"v":8576.62,"d":"8576.620"},{"v":10.3307,"d":"10.331"},{"v":0.271951,"d":"0.272"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT1G32928.1"]
["Os04t0234600-01","Rice","Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-01);Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-02);Similar to Sedoheptulose-1,7-bisphosphatase. (Os04t0234600-03)","4",392,{"v":42247.3,"d":"42247.300"},{"v":5.8838,"d":"5.884"},{"v":-0.152296,"d":"-0.152"},"plastid","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G55800.1"]
["Os04t0513900-01","Rice","BETA-GLUCOSIDASE 18Glycoside hydrolase, family 1 protein. (Os04t0513900-01)","4",253,{"v":29611,"d":"29611.000"},{"v":4.63974,"d":"4.640"},{"v":-0.518972,"d":"-0.519"},"cytosol,vacuole","mitochondrion,cytosol,vacuole,nucleus","nucleus",{"$nulls":3},"vacuole","vacuole",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G61810.5"]
["Os04t0690500-03","Rice","Similar to CAA30371.1 protein (Fragment). (Os04t0690500-01);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-02);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-03);Similar to CAA30371.1 protein (Fragment). (Os04t0690500-04)","4",227,{"v":24691.5,"d":"24691.500"},{"v":11.0585,"d":"11.059"},{"v":-0.539648,"d":"-0.540"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21830.1"]
["Os05t0168800-01","Rice","KIP1-like domain containing protein. (Os05t0168800-01);KIP1-like domain containing protein. (Os05t0168800-02);Similar to CENP-E like kinetochore protein. (Os05t0168800-03)","5",624,{"v":70709.9,"d":"70709.900"},{"v":4.48097,"d":"4.481"},{"v":-0.720994,"d":"-0.721"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol",null,null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G58320.2"]
["Os05t0291700-01","Rice","Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)","5",338,{"v":35577.4,"d":"35577.400"},{"v":8.04474,"d":"8.045"},{"v":-0.0056213,"d":"-0.006"},"plastid","cytosol,peroxisome,extracellular,plastid","plastid",null,null,"plastid","plastid","cytosol,extracellular,plastid","plastid","plastid","peroxisome","plastid","plastid","plastid",null,null,"AT3G46780.1"]
["Os05t0292800-01","Rice","Similar to One helix protein (OHP). (Os05t0292800-01)","5",112,{"v":12110.3,"d":"12110.300"},{"v":11.1886,"d":"11.189"},{"v":0.310714,"d":"0.311"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G02120.1"]
["Os05t0454200-01","Rice","BRIGHT GREEN LEAFGuanine nucleotide exchange factors for Rop, Activation of small cuticular papillae development on leaf epidermis (Os05t0454200-01)","5",568,{"v":62306.9,"d":"62306.900"},{"v":4.8966,"d":"4.897"},{"v":-0.357042,"d":"-0.357"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G02010.1"]
["Os05t0460500-00","Rice","Hypothetical gene. (Os05t0460500-00)","5",153,{"v":15798.6,"d":"15798.600"},{"v":4.01069,"d":"4.011"},{"v":0.319608,"d":"0.320"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol"]
["Os06t0187500-00","Rice","Hypothetical conserved gene. (Os06t0187500-00)","6",515,{"v":54072.9,"d":"54072.900"},{"v":5.19417,"d":"5.194"},{"v":0.0038835,"d":"0.004"},"plasma membrane","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G15480.1"]
["Os06t0573600-02","Rice","BETA-GALACTOSIDASE 2Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os06t0573600-01);Similar to Beta-galactosidase. (Os06t0573600-02);Similar to Beta-galactosidase. (Os06t0573600-03)","6",389,{"v":41982,"d":"41982.000"},{"v":8.49956,"d":"8.500"},{"v":-0.30437,"d":"-0.304"},"peroxisome,vacuole","mitochondrion,extracellular,nucleus,vacuole,golgi,peroxisome","nucleus",null,"golgi",null,"vacuole","extracellular",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT1G45130.1"]
["Os06t0729650-00","Rice","Similar to Photosystem II stability/assembly factor HCF136, chloroplastic. (Os06t0729650-00)","6",394,{"v":42853.6,"d":"42853.600"},{"v":9.35811,"d":"9.358"},{"v":-0.232234,"d":"-0.232"},"plastid","mitochondrion,plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G23120.2"]
["Os07t0424400-02","Rice","CELLULOSE SYNTHASE A3Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)","7",890,{"v":100749,"d":"100749.000"},{"v":7.58388,"d":"7.584"},{"v":-0.435506,"d":"-0.436"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT2G21770.1"]
["Os07t0424400-06","Rice","CELLULOSE SYNTHASE A3Similar to Cellulose synthase-7. (Os07t0424400-01);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-02);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-03);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-04);Similar to cDNA clone:J023086F23, full insert sequence. (Os07t0424400-05);Similar to Cellulose synthase-7. (Os07t0424400-06)","7",{"v":1093,"d":"1,093"},{"v":123509,"d":"123509.000"},{"v":7.09755,"d":"7.098"},{"v":-0.248124,"d":"-0.248"},"cytosol","mitochondrion,cytosol,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT5G64740.1"]
["Os07t0505200-01","Rice","RICE SQUAMOSA PROMOTER-BINDING-LIKE 13, Squamosa promoter-binding-like protein 13Plant-specific transcription factor, Control of grain size (Os07t0505200-01)","7",216,{"v":22045.5,"d":"22045.500"},{"v":10.8357,"d":"10.836"},{"v":-0.679167,"d":"-0.679"},"nucleus","mitochondrion,plastid,nucleus","nucleus","plastid",null,"mitochondrion","nucleus",null,null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G53160.3"]
["Os07t0659500-01","Rice","Non-SMC condensin subunit, XCAP-D2/Cnd1 family protein. (Os07t0659500-01)","7",{"v":1325,"d":"1,325"},{"v":146334,"d":"146334.000"},{"v":5.74654,"d":"5.747"},{"v":-0.160604,"d":"-0.161"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G57060.3"]
["Os07t0664500-01","Rice","NAD(P)-binding domain containing protein. (Os07t0664500-01)","7",307,{"v":31953.6,"d":"31953.600"},{"v":7.89566,"d":"7.896"},{"v":0.248208,"d":"0.248"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT3G26760.1"]
["Os08t0473900-01","Rice","ALPHA-AMYLASE 3DAlpha-amylase isozyme 3D precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os08t0473900-01);Similar to Alpha amylase isozyme 3D. (Os08t0473900-02);Similar to Alpha amylase isozyme 3D. (Os08t0473900-03)","8",476,{"v":52420.8,"d":"52420.800"},{"v":6.1128,"d":"6.113"},{"v":-0.315336,"d":"-0.315"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"vacuole",null,"extracellular","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","vacuole","msms:extracellular:18372294,msms:extracellular:18986194,gfp:endoplasmic reticulum:19767453,gfp:golgi:19767453,msms:extracellular:25047395,msms:extracellular:26194822","19767453:Aya:A:Kitajima,Satoru:S:Asatsuma,Hisao:H:Okada,Yuki:Y:Hamada,Kentaro:K:Kaneko,Yohei:Y:Nanjo,Yasushi:Y:Kawagoe,Kiminori:K:Toyooka,Ken:K:Matsuoka,Masaki:M:Takeuchi,Akihiko:A:Nakano,Toshiaki:T:Mitsui:2009,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT1G69830.1"]
["Os08t0498400-02","Rice","caffeoyl CoA O-methyltransferase 1, Caffeoyl-CoA O-methyltransferase 2Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment). (Os08t0498400-01);Similar to Caffeoyl-CoA O-methyltransferase (Fragment). (Os08t0498400-02)","8",203,{"v":21969.4,"d":"21969.400"},{"v":4.26356,"d":"4.264"},{"v":0.196059,"d":"0.196"},"plastid","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"cytosol",null,"cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G24735.3"]
["Os09t0116900-01","Rice","Conserved hypothetical protein. (Os09t0116900-01)","9",95,{"v":9979.04,"d":"9979.040"},{"v":11.3607,"d":"11.361"},{"v":-0.466316,"d":"-0.466"},"vacuole,extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","vacuole",null,null,"AT2G16440.1"]
["Os09t0423300-01","Rice","Pentatricopeptide repeat domain containing protein. (Os09t0423300-01);Similar to pentatricopeptide (PPR) repeat-containing protein. (Os09t0423300-02);Hypothetical conserved gene. (Os09t0423300-03)","9",962,{"v":106908,"d":"106908.000"},{"v":7.48195,"d":"7.482"},{"v":-0.131289,"d":"-0.131"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G30825.1"]
["Os09t0537700-02","Rice","RIBONUCLEASE 4S-like ribonuclease, Salinity tolerance, Abiotic stress response, Regulation of photomorphogenesis (Os09t0537700-02)","9",252,{"v":28399.8,"d":"28399.800"},{"v":5.06971,"d":"5.070"},{"v":-0.159127,"d":"-0.159"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","extracellular","msms:extracellular:23159799,msms:extracellular:28232208","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G26820.1"]
["Os10t0109900-00","Rice","Major facilitator superfamily, general substrate transporter domain containing protein. (Os10t0109900-00)","10",569,{"v":61445.5,"d":"61445.500"},{"v":6.94148,"d":"6.941"},{"v":0.346924,"d":"0.347"},"plasma membrane","mitochondrion,nucleus,cytosol,vacuole,plasma membrane","nucleus",null,"vacuole",null,"cytosol","vacuole",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT1G62200.1"]
["Os10t0110800-01","Rice","Similar to Nitrate transporter (Fragment). (Os10t0110800-01);Similar to cDNA clone:J023063N08, full insert sequence. (Os10t0110800-02)","10",136,{"v":15087,"d":"15087.000"},{"v":4.51654,"d":"4.517"},{"v":0.205882,"d":"0.206"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"vacuole",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT2G02040.1"]
["Os10t0213700-01","Rice","Similar to P-166-4_1 (Fragment). (Os10t0213700-01)","10",163,{"v":16140.4,"d":"16140.400"},{"v":8.49142,"d":"8.491"},{"v":0.447239,"d":"0.447"},"plastid","plasma membrane,plastid","plastid",null,null,"plastid","plastid","plasma membrane","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G50685.1"]
["Os10t0427900-02","Rice","Conserved hypothetical protein. (Os10t0427900-01);Hypothetical conserved gene. (Os10t0427900-02)","10",42,{"v":4381.1,"d":"4381.100"},{"v":8.83371,"d":"8.834"},{"v":-0.716667,"d":"-0.717"},"cytosol,nucleus","cytosol,plasma membrane,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"plastid",{"$nulls":3},"nucleus",null,null,"AT1G63430.2"]
["Os11t0181700-02","Rice","Similar to retinol dehydrogenase 12. (Os11t0181700-01);Similar to Short-chain dehydrogenase Tic32. (Os11t0181700-02)","11",332,{"v":36507.7,"d":"36507.700"},{"v":9.79259,"d":"9.793"},{"v":-0.283133,"d":"-0.283"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT4G23420.1"]
["Os11t0707000-02","Rice","Rubisco activase, the small isoform of rice Rubisco activase, Rubisco activase small isoform, \"ribulose-1, 5-bisphosphate carboxylase/oxygenase activase\", Rubisco activase II, Rubisco activase large isoform, Rubisco activase I, Rubisco-A, RuBisCO activase A1Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-01);Ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) (Fragments). (Os11t0707000-02);Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-03);Non-protein coding transcript. (Os11t0707000-04)","11",433,{"v":47933.1,"d":"47933.100"},{"v":5.92081,"d":"5.921"},{"v":-0.406467,"d":"-0.406"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:extracellular:25047395,msms:plastid:27126603","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,27126603:Yangyang:Y:Wang,Kuixian:K:Ji,Shihua:S:Shen,Hui:H:Chen:2016","AT2G39730.3"]
["Os12t0503000-01","Rice","Similar to Allantoin permease. (Os12t0503000-01);Similar to Ureide permease 4. (Os12t0503000-03);Similar to Ureide permease 4. (Os12t0503000-04);Similar to Allantoin permease. (Os12t0503000-05)","12",418,{"v":45233,"d":"45233.000"},{"v":5.34451,"d":"5.345"},{"v":0.406938,"d":"0.407"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT2G03530.1"]
["Os12t0548700-01","Rice","Similar to MPI. (Os12t0548700-01)","12",68,{"v":7268.81,"d":"7268.810"},{"v":4.63256,"d":"4.633"},-0.025,"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","plastid",null,"mitochondrion",null,null,"extracellular","cytosol",null,null,"AT2G38870.1"]
["Os01t0101600-03","Rice","Immunoglobulin-like fold domain containing protein. (Os01t0101600-01);Immunoglobulin-like fold domain containing protein. (Os01t0101600-02);Hypothetical conserved gene. (Os01t0101600-03)","1",354,{"v":40382.5,"d":"40382.500"},{"v":9.76447,"d":"9.764"},{"v":-1.79802,"d":"-1.798"},"cytosol,plastid,nucleus","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus"]
["Os01t0117900-01","Rice","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTER 1Similar to nodulin-like protein. (Os01t0117900-01);Similar to Nodulin-like protein 5NG4. (Os01t0117900-02);Similar to nodulin-like protein. (Os01t0117900-03)","1",309,{"v":33486.9,"d":"33486.900"},{"v":9.53981,"d":"9.540"},{"v":0.836246,"d":"0.836"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT3G18200.2"]
["Os01t0124401-01","Rice","BOWMAN-BIRK INHIBITOR 3-3Similar to Bowman-Birk type bran trypsin inhibitor. (Os01t0124401-01)","1",254,{"v":27791,"d":"27791.000"},{"v":5.18903,"d":"5.189"},{"v":-0.488976,"d":"-0.489"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:24083427,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT2G13560.1"]
["Os01t0140100-01","Rice","Peptidase A1 domain containing protein. (Os01t0140100-01)","1",504,{"v":52281.5,"d":"52281.500"},{"v":4.89742,"d":"4.897"},{"v":0.118849,"d":"0.119"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","vacuole","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G25510.1"]
["Os01t0229400-02","Rice","RAC/ROP-TYPE GTPASE 1Similar to Rac-like GTP-binding protein 1. (Os01t0229400-01);Small GTP-binding protein, GTPase, Regulation of cell death, Disease resistance, Immune responses (Os01t0229400-02)","1",214,{"v":23718.6,"d":"23718.600"},{"v":9.4145,"d":"9.415"},{"v":-0.103738,"d":"-0.104"},"plasma membrane,endoplasmic reticulum","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","cytosol",null,null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","gfp:plasma membrane:20203239,gfp:endoplasmic reticulum:20227662","20203239:Letian:L:Chen,Kenji:K:Shiotani,Takashi:T:Togashi,Daisuke:D:Miki,Misa:M:Aoyama,Hann Ling:HL:Wong,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2010,20227662:Letian:L:Chen,Satoshi:S:Hamada,Masayuki:M:Fujiwara,Tingheng:T:Zhu,Nguyen Phuong:NP:Thao,Hann Ling:HL:Wong,Priti:P:Krishna,Takashi:T:Ueda,Hanae:H:Kaku,Naoto:N:Shibuya,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2010","AT4G28950.1"]
["Os01t0295900-01","Rice","Similar to cDNA clone:J023064I01, full insert sequence. (Os01t0295900-01)","1",197,{"v":20960.5,"d":"20960.500"},{"v":8.69444,"d":"8.694"},{"v":0.124873,"d":"0.125"},"mitochondrion","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"cytosol","mitochondrion","mitochondrion","mitochondrion,plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"peroxisome",null,null,"AT2G45270.1"]
["Os01t0300900-02","Rice","Galactose oxidase/kelch, beta-propeller domain containing protein. (Os01t0300900-01);Hypothetical conserved gene. (Os01t0300900-02)","1",477,{"v":51477.7,"d":"51477.700"},{"v":7.38585,"d":"7.386"},{"v":-0.429979,"d":"-0.430"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G74150.2"]
["Os01t0618900-01","Rice","Similar to Polygalacturonase. (Os01t0618900-01);Similar to polygalacturonase. (Os01t0618900-02)","1",329,{"v":35290.5,"d":"35290.500"},{"v":5.79552,"d":"5.796"},{"v":-0.13617,"d":"-0.136"},"cytosol,extracellular","mitochondrion,extracellular,nucleus,cytosol,plasma membrane","nucleus",null,null,"mitochondrion","extracellular","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G23820.1"]
["Os01t0730800-01","Rice","Mpv17/PMP22 family protein. (Os01t0730800-01);Similar to peroxisomal membrane protein 2. (Os01t0730800-02)","1",239,{"v":27192,"d":"27192.000"},{"v":11.28,"d":"11.280"},{"v":-0.197071,"d":"-0.197"},"peroxisome","mitochondrion,peroxisome,plastid,golgi","plastid",{"$nulls":3},"peroxisome","peroxisome",null,"mitochondrion",null,"plastid","golgi","peroxisome",null,null,"AT2G42770.1"]
["Os01t0730800-02","Rice","Mpv17/PMP22 family protein. (Os01t0730800-01);Similar to peroxisomal membrane protein 2. (Os01t0730800-02)","1",28,{"v":3189.98,"d":"3189.980"},{"v":9.44787,"d":"9.448"},{"v":0.764286,"d":"0.764"},"endoplasmic reticulum,vacuole","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,null,"AT2G42770.1"]
["Os01t0798500-01","Rice","CESTSimilar to predicted protein. (Os01t0798500-01);Malate synthase-like family protein. (Os01t0798500-02)","1",270,{"v":29077.1,"d":"29077.100"},{"v":4.21413,"d":"4.214"},{"v":-0.406667,"d":"-0.407"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G44650.1"]
["Os01t0823500-01","Rice","OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6Protein of unknown function DUF623, plant domain containing protein. (Os01t0823500-01)","1",379,{"v":41635.8,"d":"41635.800"},{"v":10.1065,"d":"10.107"},{"v":-0.577309,"d":"-0.577"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT1G06920.1"]
["Os01t0866400-01","Rice","MOC2Similar to Fructose-1,6-bisphosphatase (EC 3.1.3.11) (Fragment). (Os01t0866400-01)","1",339,{"v":37050.6,"d":"37050.600"},{"v":6.06779,"d":"6.068"},{"v":-0.130383,"d":"-0.130"},"cytosol,plasma membrane,extracellular","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:18986194,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT1G43670.1"]
["Os01t0881900-01","Rice","Leucine-rich repeat, cysteine-containing containing protein. (Os01t0881900-01)","1",379,{"v":40744.8,"d":"40744.800"},{"v":6.98775,"d":"6.988"},{"v":0.00316623,"d":"0.003"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G21410.1"]
["Os01t0941800-02","Rice","Metallophosphoesterase domain containing protein. (Os01t0941800-01);Similar to predicted protein. (Os01t0941800-02)","1",173,{"v":18813.3,"d":"18813.300"},{"v":7.56084,"d":"7.561"},{"v":-0.130058,"d":"-0.130"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","mitochondrion",null,null,"AT3G10150.2"]
["Os02t0125700-01","Rice","Similar to lil3 protein. (Os02t0125700-01)","2",250,{"v":27594.9,"d":"27594.900"},{"v":6.55333,"d":"6.553"},{"v":-0.3072,"d":"-0.307"},"plastid","plastid,nucleus","plastid",null,"plastid","plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT4G17600.1"]
["Os02t0158500-00","Rice","cdc2 (cyclin-dependent kinase 2) -like geneUncharacterized plant-specific domain 01627 containing protein. (Os02t0158500-00)","2",392,{"v":40727.7,"d":"40727.700"},{"v":8.61558,"d":"8.616"},{"v":0.090051,"d":"0.090"},"plastid","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","plastid",null,null,"mitochondrion","plastid","peroxisome,plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT5G67210.1"]
["Os02t0170000-01","Rice","Conserved hypothetical protein. (Os02t0170000-01);Pentatricopeptide repeat domain containing protein. (Os02t0170000-02)","2",152,{"v":17551,"d":"17551.000"},{"v":10.0346,"d":"10.035"},{"v":-0.494079,"d":"-0.494"},"cytosol","mitochondrion,cytosol,plastid","plastid",{"$nulls":3},"cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT2G35130.2"]
["Os02t0204400-00","Rice","UVR3Similar to (6-4)DNA photolyase. (Os02t0204400-00)","2",551,{"v":62267.3,"d":"62267.300"},{"v":8.91788,"d":"8.918"},{"v":-0.452813,"d":"-0.453"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","plastid","plastid","plastid","mitochondrion",null,null,"plastid","plastid",null,null,"AT3G15620.1"]
["Os02t0253800-01","Rice","Conserved hypothetical protein. (Os02t0253800-01)","2",53,{"v":5763.08,"d":"5763.080"},{"v":4.07843,"d":"4.078"},{"v":0.345283,"d":"0.345"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","vacuole",null,null,"AT1G08065.1"]
["Os02t0522300-01","Rice","Conserved hypothetical protein. (Os02t0522300-01);Conserved hypothetical protein. (Os02t0522300-02);Similar to cDNA clone:001-036-H04, full insert sequence. (Os02t0522300-03)","2",175,{"v":19864.3,"d":"19864.300"},{"v":5.08531,"d":"5.085"},{"v":-0.697143,"d":"-0.697"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT4G07350.1"]
["Os02t0533300-01","Rice","ALPHA-CARBONIC ANHYDRASE 1Carbonic anhydrase, CAH1-like domain containing protein. (Os02t0533300-01)","2",266,{"v":29832.7,"d":"29832.700"},{"v":8.4553,"d":"8.455"},{"v":-0.374812,"d":"-0.375"},"endoplasmic reticulum,extracellular,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","vacuole",null,null,"AT3G52720.3"]
["Os02t0590400-03","Rice","Lecithin:cholesterol acyltransferase family protein. (Os02t0590400-01);Lecithin:cholesterol acyltransferase family protein. (Os02t0590400-02);Lecithin:cholesterol acyltransferase family protein. (Os02t0590400-03)","2",440,{"v":49217.2,"d":"49217.200"},{"v":5.91514,"d":"5.915"},{"v":-0.1675,"d":"-0.168"},"plasma membrane,extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT1G27480.1"]
["Os02t0617300-01","Rice","Similar to OSIGBa0157A06.7 protein. (Os02t0617300-01);Armadillo-like helical domain containing protein. (Os02t0617300-02)","2",664,{"v":73634.2,"d":"73634.200"},{"v":8.71777,"d":"8.718"},{"v":-0.0917169,"d":"-0.092"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G20190.1"]
["Os02t0640100-00","Rice","Hypothetical conserved gene. (Os02t0640100-00)","2",87,{"v":9022.22,"d":"9022.220"},{"v":9.90043,"d":"9.900"},{"v":0.109195,"d":"0.109"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane,plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT1G63245.1"]
["Os02t0640800-01","Rice","Similar to Carbonyl reductase 1. (Os02t0640800-01);Similar to Carbonyl reductase 1. (Os02t0640800-02);Similar to carbonyl reductase 1. (Os02t0640800-03)","2",106,{"v":11089.4,"d":"11089.400"},{"v":7.61893,"d":"7.619"},{"v":0.201887,"d":"0.202"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G01800.1"]
["Os02t0660100-00","Rice","Hypothetical conserved gene. (Os02t0660100-00)","2",101,{"v":11111.6,"d":"11111.600"},{"v":11.2234,"d":"11.223"},{"v":0.150495,"d":"0.150"},"mitochondrion,peroxisome,plastid","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"mitochondrion","peroxisome","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","mitochondrion",null,null,"AT4G32680.1"]
["Os02t0760200-02","Rice","Conserved hypothetical protein. (Os02t0760200-01);Conserved hypothetical protein. (Os02t0760200-02)","2",356,{"v":41256.3,"d":"41256.300"},{"v":9.35601,"d":"9.356"},{"v":-0.322753,"d":"-0.323"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","plastid,nucleus",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT4G24610.1"]
["Os02t0817900-01","Rice","P-450 97A4Cytochrome P450 family protein. (Os02t0817900-01)","2",643,{"v":69865.9,"d":"69865.900"},{"v":5.72366,"d":"5.724"},{"v":-0.11182,"d":"-0.112"},"plastid","endoplasmic reticulum,plastid","plastid",null,null,"plastid","plastid","endoplasmic reticulum","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G31800.1"]
["Os03t0125000-02","Rice","RPL5Similar to 50S ribosomal protein L5, chloroplast. (Os03t0125000-01);Similar to 50S ribosomal protein L5, chloroplast. (Os03t0125000-02)","3",279,{"v":30221.1,"d":"30221.100"},11.064,{"v":-0.166667,"d":"-0.167"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G01310.1"]
["Os03t0129400-02","Rice","Conserved hypothetical protein. (Os03t0129400-01);Similar to EST AU078206(E20111) corresponds to a region of the predicted gene. (Os03t0129400-02)","3",63,{"v":7618.46,"d":"7618.460"},{"v":8.84424,"d":"8.844"},{"v":-0.0714286,"d":"-0.071"},"cytosol,extracellular","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"extracellular",null,null,"AT3G44560.3"]
["Os03t0158300-01","Rice","Glycoside hydrolase-type carbohydrate-binding domain containing protein. (Os03t0158300-01)","3",359,{"v":38137.4,"d":"38137.400"},{"v":7.80858,"d":"7.809"},{"v":-0.180223,"d":"-0.180"},"plasma membrane,plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G64770.1"]
["Os03t0223000-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 377Similar to atypical receptor-like kinase MARK. (Os03t0223000-01);Similar to Atypical receptor-like kinase MARK. (Os03t0223000-02);Similar to atypical receptor-like kinase MARK. (Os03t0223000-03)","3",228,{"v":24946.3,"d":"24946.300"},{"v":5.35183,"d":"5.352"},{"v":-0.397807,"d":"-0.398"},"plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"plasma membrane","plastid","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT1G48480.1"]
["Os03t0223000-03","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 377Similar to atypical receptor-like kinase MARK. (Os03t0223000-01);Similar to Atypical receptor-like kinase MARK. (Os03t0223000-02);Similar to atypical receptor-like kinase MARK. (Os03t0223000-03)","3",210,{"v":22894.9,"d":"22894.900"},{"v":5.33823,"d":"5.338"},{"v":-0.374286,"d":"-0.374"},"plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"plasma membrane","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","plastid","msms:plasma membrane:18557835,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008","AT1G48480.1"]
["Os03t0279200-01","Rice","Similar to Histone H2A. (Os03t0279200-01)","3",159,{"v":16402.3,"d":"16402.300"},{"v":11.3807,"d":"11.381"},{"v":-0.283019,"d":"-0.283"},"nucleus","mitochondrion,vacuole,nucleus","nucleus",null,"vacuole",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:18022940,msms:nucleus:18203134,msms:plastid:21433289,msms:nucleus:23777608","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008,23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G02560.1"]
["Os03t0335500-01","Rice","Protein kinase, core domain containing protein. (Os03t0335500-01);Protein kinase, core domain containing protein. (Os03t0335500-02)","3",971,{"v":102824,"d":"102824.000"},{"v":5.2044,"d":"5.204"},{"v":0.0842431,"d":"0.084"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT3G56370.1"]
["Os03t0363500-02","Rice","Similar to Vacuolar monosaccharide symporter 1. (Os03t0363500-01);Similar to Sugar transporter-like protein. (Os03t0363500-02);Similar to solute carrier family 2, facilitated glucose transporter member 8. (Os03t0363500-03)","3",533,{"v":56283.8,"d":"56283.800"},{"v":9.13892,"d":"9.139"},{"v":0.582552,"d":"0.583"},"plasma membrane","plasma membrane,extracellular,plastid","plastid",null,null,"plastid","plastid","plasma membrane","plastid","plastid",null,"plastid","plastid","extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G18840.1"]
["Os03t0395000-02","Rice","heme oxgenase 2, heme oxygenase-2, Young Leaf Chlorosis 2Stroma-localized heme oxygenase 2, Tetrapyrrole biosynthesis (Os03t0395000-01);Similar to Heme oxygenase 2 (Fragment). (Os03t0395000-02)","3",115,{"v":13130.8,"d":"13130.800"},{"v":8.67181,"d":"8.672"},{"v":-0.286087,"d":"-0.286"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","peroxisome,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G26550.2"]
["Os03t0409600-01","Rice","Conserved hypothetical protein. (Os03t0409600-01)","3",96,{"v":11573.9,"d":"11573.900"},{"v":6.32776,"d":"6.328"},{"v":-0.322917,"d":"-0.323"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G01710.1"]
["Os03t0421800-01","Rice","X8 domain containing protein. (Os03t0421800-01)","3",188,{"v":18368.5,"d":"18368.500"},{"v":4.19464,"d":"4.195"},{"v":0.377128,"d":"0.377"},"endoplasmic reticulum,extracellular,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT1G18650.1"]
["Os03t0425000-03","Rice","ALBINO LEAF 1Similar to predicted protein. (Os03t0425000-01);RAP domain domain containing protein. (Os03t0425000-02);Similar to predicted protein. (Os03t0425000-03)","3",640,{"v":70794.7,"d":"70794.700"},{"v":5.07012,"d":"5.070"},{"v":-0.394219,"d":"-0.394"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","nucleus",null,"mitochondrion",null,"plastid","plastid","nucleus",null,null,"AT2G31890.1"]
["Os03t0611200-01","Rice","Aldo/keto reductase family protein. (Os03t0611200-01)","3",405,{"v":45666.5,"d":"45666.500"},{"v":8.18073,"d":"8.181"},{"v":-0.391358,"d":"-0.391"},"plastid","plastid,endoplasmic reticulum,peroxisome","plastid",null,"endoplasmic reticulum","plastid","peroxisome","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:extracellular:23159799","23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G04420.1"]
["Os03t0629900-01","Rice","Conserved hypothetical protein. (Os03t0629900-01);Conserved hypothetical protein. (Os03t0629900-02)","3",248,{"v":26472.6,"d":"26472.600"},{"v":9.37921,"d":"9.379"},{"v":-0.440726,"d":"-0.441"},"cytosol,plastid,nucleus","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid,nucleus",null,"plastid",null,null,"plastid","nucleus"]
["Os03t0708500-00","Rice","FK506 binding protein 17-2Capsid/spike protein, ssDNA virus domain containing protein. (Os03t0708500-00)","3",252,{"v":26625.8,"d":"26625.800"},{"v":8.19306,"d":"8.193"},-0.225,"plastid","vacuole,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","vacuole,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G18170.1"]
["Os03t0770900-01","Rice","Conserved hypothetical protein. (Os03t0770900-01)","3",545,{"v":60096.2,"d":"60096.200"},{"v":10.4071,"d":"10.407"},{"v":-0.961835,"d":"-0.962"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G17000.3"]
["Os03t0778100-03","Rice","PHOTOSYSTEM I SUBUNITSimilar to Photosystem-1 F subunit. (Os03t0778100-01);Similar to Photosystem-1 F subunit. (Os03t0778100-02);Similar to Photosystem-1 F subunit. (Os03t0778100-03)","3",236,{"v":24768,"d":"24768.000"},{"v":10.0305,"d":"10.031"},{"v":0.155932,"d":"0.156"},"plasma membrane,extracellular,nucleus","mitochondrion,plastid","plastid",null,"plastid","plastid","plastid","plastid","mitochondrion","plastid",null,"plastid","plastid","plastid","msms:nucleus:19621931,msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G31330.1"]
["Os03t0808100-03","Rice","CELLULOSE SYNTHASE A2Similar to Cellulose synthase-5. (Os03t0808100-01);Similar to Cellulose synthase BoCesA5. (Os03t0808100-02);Similar to Cellulose synthase BoCesA5. (Os03t0808100-03)","3",379,{"v":42556,"d":"42556.000"},{"v":7.75639,"d":"7.756"},{"v":0.375726,"d":"0.376"},"cytosol,peroxisome","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT4G32410.1"]
["Os03t0827700-02","Rice","RNA helicase 3Similar to ATP-dependent RNA helicase. (Os03t0827700-01);Similar to cDNA clone:J013043E01, full insert sequence. (Os03t0827700-02)","3",433,{"v":46826.2,"d":"46826.200"},{"v":8.87908,"d":"8.879"},{"v":-0.544573,"d":"-0.545"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","mitochondrion,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G26742.3"]
["Os03t0844000-01","Rice","Pentatricopeptide repeat domain containing protein. (Os03t0844000-01);Hypothetical conserved gene. (Os03t0844000-02)","3",702,{"v":77118.8,"d":"77118.800"},{"v":5.87745,"d":"5.877"},{"v":-0.0361823,"d":"-0.036"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","mitochondrion","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT3G13880.1"]
["Os03t0857500-02","Rice","Protein of unknown function DUF303, acetylesterase putative domain containing protein. (Os03t0857500-01);Similar to H0201G08.9 protein. (Os03t0857500-02)","3",102,{"v":11515.1,"d":"11515.100"},{"v":9.51423,"d":"9.514"},{"v":-0.118627,"d":"-0.119"},"cytosol,extracellular,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular",null,null,"AT4G34215.2"]
["Os04t0249500-00","Rice","SUCROSE SYNTHASE 7Similar to H0211A12.6 protein. (Os04t0249500-00)","4",844,{"v":96483,"d":"96483.000"},{"v":8.08587,"d":"8.086"},{"v":-0.414218,"d":"-0.414"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:21433289,gfp:cytosol:21533550,gfp:plasma membrane:21533550","21533550:Jung-Il:JI:Cho,Hyun-Bi:HB:Kim,Chi-Yeol:CY:Kim,Tae-Ryong:TR:Hahn,Jong-Seong:JS:Jeon:2011,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G73370.1"]
["Os04t0269600-04","Rice","DIAMINE OXIDASE 2Similar to Primary amine oxidase. (Os04t0269600-01);Similar to cDNA clone:J023110G01, full insert sequence. (Os04t0269600-02);Hypothetical conserved gene. (Os04t0269600-03);Similar to cDNA clone:J023110G01, full insert sequence. (Os04t0269600-04)","4",293,{"v":32953.2,"d":"32953.200"},{"v":6.72503,"d":"6.725"},{"v":-0.401365,"d":"-0.401"},"cytosol","mitochondrion,plasma membrane,cytosol,peroxisome,plastid","cytosol",null,"peroxisome",null,"cytosol","plasma membrane",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT4G12290.1"]
["Os04t0296700-01","Rice","Similar to cDNA clone:006-306-G03, full insert sequence. (Os04t0296700-01);Hypothetical conserved gene. (Os04t0296700-02);Hypothetical conserved gene. (Os04t0296700-03)","4",44,{"v":4878.98,"d":"4878.980"},{"v":8.73588,"d":"8.736"},{"v":0.313636,"d":"0.314"},"mitochondrion,plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plasma membrane,vacuole",null,"mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT1G14730.1"]
["Os04t0341900-00","Rice","Similar to OSIGBa0159H11-OSIGBa0137A07.10 protein. (Os04t0341900-00)","4",267,{"v":28208.5,"d":"28208.500"},{"v":11.9771,"d":"11.977"},{"v":-0.701873,"d":"-0.702"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus",null,"nucleus","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G49010.1"]
["Os04t0461100-01","Rice","Ribosomal protein, PSRP-3/Ycf65 domain containing protein. (Os04t0461100-01);Similar to H0219H12.12 protein. (Os04t0461100-02)","4",183,{"v":19957,"d":"19957.000"},{"v":7.51272,"d":"7.513"},{"v":-0.282514,"d":"-0.283"},"plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G68590.1"]
["Os04t0465500-02","Rice","Acyl-CoA N-acyltransferase domain containing protein. (Os04t0465500-02)","4",316,{"v":34544.1,"d":"34544.100"},{"v":8.21033,"d":"8.210"},{"v":-0.298101,"d":"-0.298"},"endoplasmic reticulum,plastid","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","endoplasmic reticulum",null,null,"AT1G24040.1"]
["Os04t0490800-01","Rice","4-nitrophenylphosphatase 1Haloacid dehalogenase-like hydrolase domain containing protein. (Os04t0490800-01)","4",365,{"v":39496.3,"d":"39496.300"},{"v":7.20756,"d":"7.208"},{"v":-0.124932,"d":"-0.125"},"extracellular","mitochondrion,plastid","plastid",null,null,"mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:extracellular:18986194,msms:nucleus:19321431,msms:extracellular:20433195,msms:extracellular:23159799,msms:nucleus:24133045,msms:plasma membrane:27800704,msms:extracellular:28232208","20433195:Aarti:A:Pandey,Uma:U:Rajamani,Jitendra:J:Verma,Pratigya:P:Subba,Navjyoti:N:Chakraborty,Asis:A:Datta,Subhra:S:Chakraborty,Niranjan:N:Chakraborty:2010,24133045:Dinesh Kumar:DK:Jaiswal,Doel:D:Ray,Mani Kant:MK:Choudhary,Pratigya:P:Subba,Amit:A:Kumar,Jitendra:J:Verma,Rajiv:R:Kumar,Asis:A:Datta,Subhra:S:Chakraborty,Niranjan:N:Chakraborty:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19321431:Mani Kant:MK:Choudhary,Debarati:D:Basu,Asis:A:Datta,Niranjan:N:Chakraborty,Subhra:S:Chakraborty:2009,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT5G36700.1"]
["Os04t0534600-01","Rice","PEROXIN 11-4Peroxisomal protein, Response to salt and low nitrogen stresses (Os04t0534600-01)","4",222,{"v":24712.1,"d":"24712.100"},{"v":10.6755,"d":"10.676"},{"v":0.0351351,"d":"0.035"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","peroxisome",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G47430.1"]
["Os04t0577800-01","Rice","Uncharacterised protein family UPF0136, Transmembrane domain containing protein. (Os04t0577800-01)","4",160,{"v":16526.3,"d":"16526.300"},{"v":11,"d":"11.000"},{"v":0.4525,"d":"0.453"},"plastid","plastid,golgi","plastid",null,null,"plastid","plastid","golgi","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G33265.1"]
["Os04t0620600-01","Rice","OsSTA132Similar to NOI protein. (Os04t0620600-01)","4",92,{"v":10220.1,"d":"10220.100"},{"v":10.1452,"d":"10.145"},{"v":-0.95,"d":"-0.950"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G55850.1"]
["Os04t0670100-00","Rice","Similar to H0818H01.13 protein. (Os04t0670100-00)","4",469,{"v":50878.4,"d":"50878.400"},12.746,{"v":-0.733476,"d":"-0.733"},"extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","vacuole",null,null,"AT4G01290.2"]
["Os05t0111200-01","Rice","Similar to Amino acid selective channel protein. (Os05t0111200-01)","5",146,{"v":15616.9,"d":"15616.900"},{"v":8.84005,"d":"8.840"},{"v":-0.0417808,"d":"-0.042"},"plasma membrane,plastid","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:21433289,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT2G28900.1"]
["Os05t0186000-03","Rice","Similar to 30S ribosomal protein S31, chloroplast (Fragment). (Os05t0186000-01);Similar to PSRP4. (Os05t0186000-02);Similar to 30S ribosomal protein S31, chloroplast (Fragment). (Os05t0186000-03)","5",126,{"v":13351.8,"d":"13351.800"},{"v":10.3427,"d":"10.343"},{"v":-0.378571,"d":"-0.379"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G38140.1"]
["Os05t0217700-01","Rice","BURP domain-containing protein 7BURP domain containing protein. (Os05t0217700-01)","5",181,{"v":19204,"d":"19204.000"},{"v":12.1876,"d":"12.188"},{"v":-0.342541,"d":"-0.343"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT5G25610.1"]
["Os05t0275000-01","Rice","Pentatricopeptide repeat domain containing protein. (Os05t0275000-01)","5",793,{"v":87957.1,"d":"87957.100"},{"v":8.02952,"d":"8.030"},{"v":-0.188777,"d":"-0.189"},"cytosol,plastid","cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid","plastid","cytosol",null,null,"AT2G18940.1"]
["Os05t0332300-01","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 18Similar to CBL-interacting protein kinase 2. (Os05t0332300-01);Similar to cDNA clone:J033034P20, full insert sequence. (Os05t0332300-02)","5",457,{"v":51500.3,"d":"51500.300"},{"v":9.11944,"d":"9.119"},{"v":-0.348359,"d":"-0.348"},"cytosol","mitochondrion,cytosol,nucleus","cytosol",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G58380.1"]
["Os05t0382900-01","Rice","ANNEXIN 4Annexin family protein. (Os05t0382900-01);Similar to annexin-like protein RJ4. (Os05t0382900-02)","5",372,{"v":40265,"d":"40265.000"},{"v":5.79948,"d":"5.799"},{"v":-0.0983871,"d":"-0.098"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G38760.1"]
["Os05t0390100-01","Rice","Dynamin family protein. (Os05t0390100-01)","5",803,{"v":88311,"d":"88311.000"},{"v":4.65553,"d":"4.656"},{"v":-0.123537,"d":"-0.124"},"mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plastid","mitochondrion","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","peroxisome",null,null,"AT1G03160.1"]
["Os05t0406100-03","Rice","Inosine/uridine-preferring nucleoside hydrolase domain containing protein. (Os05t0406100-01);Hypothetical conserved gene. (Os05t0406100-02);Hypothetical conserved gene. (Os05t0406100-03)","5",341,{"v":37156.5,"d":"37156.500"},{"v":6.80518,"d":"6.805"},{"v":-0.167449,"d":"-0.167"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G18890.1"]
["Os05t0451200-01","Rice","Hypothetical protein. (Os05t0451200-01)","5",86,{"v":9528.5,"d":"9528.500"},{"v":11.9593,"d":"11.959"},{"v":-0.34186,"d":"-0.342"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT1G21690.2"]
["Os05t0497675-01","Rice","Ribosomal L11 methyltransferase family protein. (Os05t0497675-01)","5",409,{"v":43205.4,"d":"43205.400"},{"v":4.90933,"d":"4.909"},{"v":-6.35697E-3,"d":"-0.006"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","mitochondrion","cytosol,plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G53920.1"]
["Os05t0519600-02","Rice","DJ-1/PfpI domain containing protein D, DJ-1 protein DSimilar to 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme. (Os05t0519600-01);Hypothetical conserved gene. (Os05t0519600-02)","5",454,{"v":48676.5,"d":"48676.500"},{"v":8.56764,"d":"8.568"},{"v":0.0519824,"d":"0.052"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","plastid",null,null,"AT4G34020.1"]
["Os05t0579500-01","Rice","Similar to 10A19I.7. (Os05t0579500-01)","5",121,{"v":13240.5,"d":"13240.500"},{"v":6.50213,"d":"6.502"},{"v":-0.284298,"d":"-0.284"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G72330.2"]
["Os06t0203200-01","Rice","Flavin-containing monooxygenase FMO family protein. (Os06t0203200-01);Hypothetical conserved gene. (Os06t0203200-02)","6",517,{"v":56353.7,"d":"56353.700"},{"v":7.20292,"d":"7.203"},{"v":-0.050677,"d":"-0.051"},"mitochondrion,peroxisome,plastid","mitochondrion,peroxisome,plastid,nucleus","nucleus",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,null,"plastid","mitochondrion",null,null,"AT5G45180.1"]
["Os06t0233800-01","Rice","Conserved hypothetical protein. (Os06t0233800-01)","6",371,{"v":39091,"d":"39091.000"},{"v":4.81525,"d":"4.815"},{"v":-0.179515,"d":"-0.180"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G60060.1"]
["Os06t0564500-01","Rice","Cysteine synthase (EC 4.2.99.8). (Os06t0564500-01)","6",357,{"v":38474.6,"d":"38474.600"},{"v":4.63331,"d":"4.633"},{"v":-0.147339,"d":"-0.147"},"cytosol","mitochondrion,cytosol,plastid,cytoskeleton","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytoskeleton","cytosol",null,null,"AT2G43750.1"]
["Os06t0608700-02","Rice","YELLOW GREEN AND DROOPY LEAF-1Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13). (Os06t0608700-01);Similar to Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13). (Os06t0608700-02);Fructose-1,6-bisphosphate aldolase (EC:4.1.2.13), Chlorophyll biosynthesis, Chloroplast development, Sugar metabolism (Os06t0608700-03)","6",358,{"v":37756.2,"d":"37756.200"},{"v":7.8991,"d":"7.899"},{"v":-0.0455307,"d":"-0.046"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G26530.2"]
["Os06t0693200-02","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 216Protein kinase, core domain containing protein. (Os06t0693200-01);Hypothetical conserved gene. (Os06t0693200-02)","6",178,{"v":19215.7,"d":"19215.700"},{"v":9.55671,"d":"9.557"},{"v":-0.405056,"d":"-0.405"},"mitochondrion","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,"plasma membrane","mitochondrion","mitochondrion","cytosol,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT2G18890.2"]
["Os06t0725300-01","Rice","EXLA4Barwin-related endoglucanase domain containing protein. (Os06t0725300-01)","6",313,{"v":34122.3,"d":"34122.300"},{"v":6.57384,"d":"6.574"},{"v":-0.263898,"d":"-0.264"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","vacuole",null,null,"AT3G45970.1"]
["Os07t0100900-01","Rice","Legume lectin, beta domain containing protein. (Os07t0100900-01)","7",305,{"v":32833.7,"d":"32833.700"},{"v":9.99723,"d":"9.997"},{"v":0.179016,"d":"0.179"},"plasma membrane,extracellular,plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plasma membrane",null,null,"AT5G01090.1"]
["Os07t0105600-01","Rice","Photosystem II oxygen evolving complex protein PsbQ family protein. (Os07t0105600-01)","7",222,{"v":24229.9,"d":"24229.900"},{"v":8.30394,"d":"8.304"},{"v":-0.101802,"d":"-0.102"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","plastid","plastid,nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","plastid","msms:plastid:17189339,msms:extracellular:23159799,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G01440.1"]
["Os07t0160100-01","Rice","YABBY1Similar to cDNA clone:J023038F18, full insert sequence. (Os07t0160100-01);YABBY family transcription factor, Stamen and carpel development, Feedback regulation of gibberellin biosynthesis (Os07t0160100-02);Similar to MADS-box transcription factor. (Os07t0160100-03)","7",34,{"v":3776.51,"d":"3776.510"},{"v":5.35622,"d":"5.356"},{"v":0.744118,"d":"0.744"},"endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","vacuole",null,null,"AT1G08465.1"]
["Os07t0176900-02","Rice","Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6). (Os07t0176900-01);Similar to ribose-5-phosphate isomerase. (Os07t0176900-02)","7",271,{"v":28690.4,"d":"28690.400"},{"v":5.6516,"d":"5.652"},{"v":-0.0594096,"d":"-0.059"},"plasma membrane,extracellular","mitochondrion,cytosol,endoplasmic reticulum,plastid","plastid",null,"endoplasmic reticulum","mitochondrion","cytosol","plastid",null,"plastid",null,"plastid",null,"cytosol","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G04790.1"]
["Os07t0277200-01","Rice","Conserved hypothetical protein. (Os07t0277200-01)","7",106,{"v":11259.3,"d":"11259.300"},{"v":8.79142,"d":"8.791"},{"v":-0.689623,"d":"-0.690"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid",null,"mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT5G28770.1"]
["Os07t0407700-03","Rice","Hypothetical conserved gene. (Os07t0407700-01);Conserved hypothetical protein. (Os07t0407700-02);Hypothetical conserved gene. (Os07t0407700-03);Hypothetical conserved gene. (Os07t0407700-04)","7",68,{"v":7410.81,"d":"7410.810"},{"v":9.70038,"d":"9.700"},{"v":-0.935294,"d":"-0.935"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT2G14100.1"]
["Os07t0459000-01","Rice","Hypothetical protein. (Os07t0459000-01)","7",91,{"v":10162,"d":"10162.000"},{"v":12.1199,"d":"12.120"},{"v":-1.15385,"d":"-1.154"},"mitochondrion","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT5G07740.2"]
["Os07t0468100-01","Rice","TAU GLUTATHIONE S-TRANSFERASE 46Similar to Glutathione S-transferase GST 19 (EC 2.5.1.18). (Os07t0468100-01);Similar to Glutathione S-transferase GST 19 (EC 2.5.1.18). (Os07t0468100-02)","7",232,{"v":25827.8,"d":"25827.800"},{"v":4.74139,"d":"4.741"},{"v":-0.178448,"d":"-0.178"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"vacuole",null,"cytosol","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G17170.1"]
["Os07t0546400-01","Rice","NPH3 domain containing protein. (Os07t0546400-01)","7",549,{"v":57929,"d":"57929.000"},{"v":8.5759,"d":"8.576"},{"v":0.0571949,"d":"0.057"},"mitochondrion,cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plasma membrane,plastid",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT3G22104.1"]
["Os07t0587200-01","Rice","NPH3 domain containing protein. (Os07t0587200-01)","7",375,{"v":41458.9,"d":"41458.900"},{"v":10.9467,"d":"10.947"},{"v":-0.302933,"d":"-0.303"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT3G49900.1"]
["Os07t0665100-01","Rice","Hypothetical protein. (Os07t0665100-01)","7",112,{"v":11565,"d":"11565.000"},{"v":8.93269,"d":"8.933"},{"v":0.00625,"d":"0.006"},"cytosol,plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plasma membrane,nucleus","plastid","mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G61680.2"]
["Os08t0160500-02","Rice","CELLULOSE SYNTHASE LIKE F6MLG (mixed-linkage glucan) synthase, Biosynthesis of MLG (cell wall polysaccharide) (Os08t0160500-01);Similar to Cellulose synthase-like CslF6. (Os08t0160500-02)","8",261,{"v":29808.6,"d":"29808.600"},{"v":6.40063,"d":"6.401"},{"v":-0.230651,"d":"-0.231"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G33100.1"]
["Os08t0226600-01","Rice","Hypothetical gene. (Os08t0226600-01);Non-protein coding transcript. (Os08t0226600-02)","8",76,{"v":8616.51,"d":"8616.510"},{"v":10.2707,"d":"10.271"},{"v":-0.0171053,"d":"-0.017"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","extracellular",null,null,"AT5G44180.2"]
["Os08t0254500-02","Rice","SECYSimilar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-01);Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-02);Similar to Preprotein translocase subunit secY, chloroplastic. (Os08t0254500-03)","8",556,{"v":59533.1,"d":"59533.100"},{"v":10.1795,"d":"10.180"},{"v":0.185612,"d":"0.186"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G18710.1"]
["Os08t0345800-01","Rice","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 2Similar to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPASE B) (Alpha-D-glucose-1-phosphate adenyl transferase). (Os08t0345800-01);Similar to Glucose-1-phosphate adenylyltransferase. (Os08t0345800-02);Similar to Isoform 2 of Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic. (Os08t0345800-03);Similar to Isoform 2 of Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic. (Os08t0345800-04)","8",479,{"v":52953.5,"d":"52953.500"},{"v":6.13781,"d":"6.138"},{"v":-0.237578,"d":"-0.238"},"plastid","cytosol,plastid","plastid",null,"plastid",null,"cytosol","plastid",null,"plastid",null,"plastid","cytosol","plastid","msms:plastid:17189339,gfp:plastid:17406793","17406793:Sang-Kyu:SK:Lee,Seon-Kap:SK:Hwang,Muho:M:Han,Joon-Seob:JS:Eom,Hong-Gyu:HG:Kang,Yulyi:Y:Han,Sang-Bong:SB:Choi,Man-Ho:MH:Cho,Seong Hee:SH:Bhoo,Gynheung:G:An,Tae-Ryong:TR:Hahn,Thomas W:TW:Okita,Jong-Seong:JS:Jeon:2007,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G48300.1"]
["Os08t0345800-02","Rice","ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 2Similar to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPASE B) (Alpha-D-glucose-1-phosphate adenyl transferase). (Os08t0345800-01);Similar to Glucose-1-phosphate adenylyltransferase. (Os08t0345800-02);Similar to Isoform 2 of Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic. (Os08t0345800-03);Similar to Isoform 2 of Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic. (Os08t0345800-04)","8",514,{"v":56107.3,"d":"56107.300"},{"v":7.04197,"d":"7.042"},{"v":-0.158755,"d":"-0.159"},"plastid","cytosol,plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","cytosol","plastid","msms:plastid:17189339,gfp:plastid:17406793,msms:plasma membrane:27800704,msms:plastid:27992503","17406793:Sang-Kyu:SK:Lee,Seon-Kap:SK:Hwang,Muho:M:Han,Joon-Seob:JS:Eom,Hong-Gyu:HG:Kang,Yulyi:Y:Han,Sang-Bong:SB:Choi,Man-Ho:MH:Cho,Seong Hee:SH:Bhoo,Gynheung:G:An,Tae-Ryong:TR:Hahn,Thomas W:TW:Okita,Jong-Seong:JS:Jeon:2007,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G48300.1"]
["Os08t0395800-01","Rice","Protein of unknown function DUF247, plant family protein. (Os08t0395800-01)","8",502,{"v":55475,"d":"55475.000"},{"v":5.58478,"d":"5.585"},{"v":-0.19502,"d":"-0.195"},"mitochondrion,cytosol,plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",{"$nulls":3},"mitochondrion","plasma membrane,nucleus",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT3G50120.1"]
["Os08t0414700-01","Rice","Similar to Trehalose-6-phosphate synthase (Fragment). (Os08t0414700-01)","8",862,{"v":97650.5,"d":"97650.500"},{"v":6.63907,"d":"6.639"},{"v":-0.240139,"d":"-0.240"},"cytosol","mitochondrion,nucleus,cytosol,vacuole,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","vacuole,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G60140.6"]
["Os08t0469600-01","Rice","Conserved hypothetical protein. (Os08t0469600-01)","8",122,{"v":13282.3,"d":"13282.300"},{"v":12.3099,"d":"12.310"},{"v":-0.286885,"d":"-0.287"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G09250.1"]
["Os08t0546700-01","Rice","Rhomboid 14, RHOMBOID 14Peptidase S54, rhomboid domain containing protein. (Os08t0546700-01)","8",323,{"v":35930.3,"d":"35930.300"},{"v":8.71313,"d":"8.713"},{"v":0.474613,"d":"0.475"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"plasma membrane","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G63120.1"]
["Os08t0553800-03","Rice","NAD(P)-binding domain containing protein. (Os08t0553800-01);NAD(P)-binding domain containing protein. (Os08t0553800-02);NAD(P)-binding domain containing protein. (Os08t0553800-03);NAD(P)-binding domain containing protein. (Os08t0553800-05)","8",386,{"v":42824.9,"d":"42824.900"},{"v":8.92332,"d":"8.923"},{"v":-0.0782383,"d":"-0.078"},"plasma membrane,plastid","cytosol,plastid","plastid",null,"plastid","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G35250.1"]
["Os08t0560900-02","Rice","PHOTOSYSTEM I SUBUNITSimilar to Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D). (Os08t0560900-01);Similar to Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D). (Os08t0560900-02);Similar to Photosystem I reaction center subunit II, chloroplastic. (Os08t0560900-03)","8",203,{"v":22035.5,"d":"22035.500"},{"v":10.2692,"d":"10.269"},{"v":-0.384236,"d":"-0.384"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G03130.1"]
["Os09t0249750-00","Rice","Hypothetical gene. (Os09t0249750-00)","9",83,{"v":9201.12,"d":"9201.120"},{"v":7.41664,"d":"7.417"},{"v":0.121687,"d":"0.122"},"mitochondrion,extracellular","mitochondrion,extracellular,plastid,nucleus","plastid",null,null,"mitochondrion","extracellular","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","extracellular",null,null,"AT3G30230.1"]
["Os09t0441000-00","Rice","Subtilisin 57, SUBTILISIN 57Peptidase S8, subtilisin-related domain containing protein. (Os09t0441000-00)","9",770,{"v":79510.1,"d":"79510.100"},{"v":7.78669,"d":"7.787"},{"v":0.035974,"d":"0.036"},"extracellular,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","vacuole",null,null,"AT2G05920.1"]
["Os09t0442800-02","Rice","Conserved hypothetical protein. (Os09t0442800-01);Conserved hypothetical protein. (Os09t0442800-02);Non-protein coding transcript. (Os09t0442800-03)","9",128,{"v":13369.8,"d":"13369.800"},{"v":7.96919,"d":"7.969"},{"v":0.0109375,"d":"0.011"},"plastid","plasma membrane,plastid","plastid",null,null,"plastid","plastid","plasma membrane","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G03540.1"]
["Os09t0503100-01","Rice","Similar to Quinone-oxidoreductase QR1 (Fragment). (Os09t0503100-01)","9",346,{"v":35959.5,"d":"35959.500"},{"v":8.75429,"d":"8.754"},{"v":0.0153179,"d":"0.015"},"plasma membrane","mitochondrion,cytosol,peroxisome","cytosol",{"$nulls":3},"peroxisome","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT4G13010.1"]
["Os09t0532400-02","Rice","PSEUDO-RESPONSE REGULATOR 95Signal transduction response regulator, receiver region domain containing protein. (Os09t0532400-01);Signal transduction response regulator, receiver region domain containing protein. (Os09t0532400-02)","9",623,{"v":69619.6,"d":"69619.600"},{"v":7.07256,"d":"7.073"},{"v":-0.791653,"d":"-0.792"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G24470.1"]
["Os10t0113100-01","Rice","Aldo/keto reductase family protein. (Os10t0113100-01);Similar to cDNA clone:J033143K18, full insert sequence. (Os10t0113100-02)","10",322,{"v":35786.1,"d":"35786.100"},{"v":5.26555,"d":"5.266"},{"v":-0.148447,"d":"-0.148"},"plastid","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,"plastid","plastid","peroxisome","plastid","plastid","mitochondrion",null,null,"plastid","cytosol",null,null,"AT1G59960.1"]
["Os10t0163040-01","Rice","Similar to Blast resistance protein. (Os10t0163040-01);Similar to Blast resistance protein. (Os10t0163040-02)","10",923,{"v":106585,"d":"106585.000"},{"v":8.52682,"d":"8.527"},{"v":-0.0776815,"d":"-0.078"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","cytosol",null,null,"AT1G59780.1"]
["Os10t0208500-02","Rice","Hypothetical protein. (Os10t0208500-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os10t0208500-02);Hypothetical conserved gene. (Os10t0208500-03)","10",465,{"v":51029,"d":"51029.000"},{"v":6.88872,"d":"6.889"},{"v":-0.290108,"d":"-0.290"},"cytosol,peroxisome,nucleus","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","cytosol,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT3G63290.1"]
["Os10t0450400-01","Rice","Protein of unknown function DUF594 family protein. (Os10t0450400-01)","10",811,{"v":92645.9,"d":"92645.900"},{"v":8.36514,"d":"8.365"},{"v":-0.11492,"d":"-0.115"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"endoplasmic reticulum","plasma membrane,plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT4G19090.1"]
["Os10t0502000-01","Rice","Similar to Thylakoid lumenal 17.4 kDa protein (P17.4) (Fragment). (Os10t0502000-01)","10",236,{"v":24535.1,"d":"24535.100"},{"v":7.65782,"d":"7.658"},{"v":0.0101695,"d":"0.010"},"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G53490.4"]
["Os10t0522700-01","Rice","Conserved hypothetical protein. (Os10t0522700-01)","10",61,{"v":7054.04,"d":"7054.040"},{"v":11.2497,"d":"11.250"},{"v":0.72459,"d":"0.725"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT3G60240.2"]
["Os11t0116200-01","Rice","non-specific lipid transfer protein 1.13, lipid transfer protein 1.13, type 1 non-specific lipid transfer protein 13Similar to nonspecific lipid-transfer protein 3. (Os11t0116200-01);Similar to Zinc finger, C3HC4 type family protein, expressed. (Os11t0116200-02)","11",118,{"v":11528.2,"d":"11528.200"},9.062,{"v":0.651695,"d":"0.652"},"extracellular,nucleus","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G59320.1"]
["Os11t0118600-01","Rice","Protein of unknown function DUF1191 family protein. (Os11t0118600-01)","11",312,{"v":33500.5,"d":"33500.500"},{"v":8.88378,"d":"8.884"},{"v":0.199038,"d":"0.199"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G08600.1"]
["Os11t0153400-01","Rice","Similar to Rac GTPase activating protein 3 (Fragment). (Os11t0153400-01)","11",479,{"v":52613.2,"d":"52613.200"},{"v":4.72172,"d":"4.722"},{"v":-0.43904,"d":"-0.439"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"mitochondrion","plastid","cytosol",null,null,"AT5G22400.1"]
["Os11t0184300-00","Rice","BETA-GLUCOSIDASE 35Beta-glucosidase 30. (Os11t0184300-00)","11",478,{"v":54890.9,"d":"54890.900"},{"v":8.73311,"d":"8.733"},{"v":-0.440167,"d":"-0.440"},"endoplasmic reticulum,vacuole","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"extracellular","plastid","vacuole","vacuole","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","endoplasmic reticulum",null,null,"AT2G44480.1"]
["Os11t0454000-01","Rice","RESPONSIVE TO ABA GENE 16CDehydrin RAB 16C. (Os11t0454000-01)","11",164,{"v":16725.4,"d":"16725.400"},{"v":9.7618,"d":"9.762"},{"v":-1.04939,"d":"-1.049"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","cytosol",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G66400.1"]
["Os11t0621400-01","Rice","Conserved hypothetical protein. (Os11t0621400-01)","11",131,{"v":13288.1,"d":"13288.100"},{"v":12.1514,"d":"12.151"},{"v":0.489313,"d":"0.489"},"plastid","plasma membrane,plastid,nucleus","plastid",null,"plastid","plastid","plastid","plasma membrane,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G34190.1"]
["Os12t0111900-00","Rice","GCN5-like 1 domain containing protein. (Os12t0111900-00)","12",133,{"v":14972.2,"d":"14972.200"},{"v":9.63192,"d":"9.632"},{"v":0.0406015,"d":"0.041"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G30330.2"]
["Os12t0113500-01","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 14Similar to CBL-interacting protein kinase 14. (Os12t0113500-01);Serine/threonine protein kinase, Microbe-assosiated molecular pattern (MAMP)-induced defense signaling pathway (Os12t0113500-02)","12",439,{"v":50327.2,"d":"50327.200"},{"v":9.96196,"d":"9.962"},{"v":-0.407745,"d":"-0.408"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT5G01810.1"]
["Os12t0115300-01","Rice","non-specific lipid transfer protein 1.19, lipid transfer protein 1.19, type 1 non-specific lipid transfer protein 19Plant lipid transfer protein and hydrophobic protein, helical domain containing protein. (Os12t0115300-01)","12",118,{"v":11507.2,"d":"11507.200"},{"v":9.28055,"d":"9.281"},{"v":0.6,"d":"0.600"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT5G59320.1"]
["Os12t0124000-03","Rice","Similar to FHA domain containing protein, expressed. (Os12t0124000-01);Similar to FHA domain containing protein, expressed. (Os12t0124000-02);Similar to FHA domain containing protein, expressed. (Os12t0124000-03);Similar to FHA domain containing protein, expressed. (Os12t0124000-04);Similar to FHA domain containing protein, expressed. (Os12t0124000-05)","12",253,{"v":26863.6,"d":"26863.600"},{"v":9.3083,"d":"9.308"},{"v":-0.322925,"d":"-0.323"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"plastid",null,"plastid",null,null,"AT2G21530.1"]
["Os12t0124000-05","Rice","Similar to FHA domain containing protein, expressed. (Os12t0124000-01);Similar to FHA domain containing protein, expressed. (Os12t0124000-02);Similar to FHA domain containing protein, expressed. (Os12t0124000-03);Similar to FHA domain containing protein, expressed. (Os12t0124000-04);Similar to FHA domain containing protein, expressed. (Os12t0124000-05)","12",200,{"v":21104.6,"d":"21104.600"},{"v":8.05951,"d":"8.060"},{"v":-0.3095,"d":"-0.310"},"plastid","mitochondrion,nucleus,cytosol,vacuole,plastid","plastid",null,"vacuole","mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT2G21530.1"]
["Os12t0271700-01","Rice","SPS3Similar to prenyl transferase. (Os12t0271700-01);Similar to Solanesyl diphosphate synthase 1. (Os12t0271700-02)","12",136,{"v":13890.6,"d":"13890.600"},{"v":9.65794,"d":"9.658"},{"v":0.0705882,"d":"0.071"},"plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",null,"extracellular","plastid","cytosol","nucleus","plastid","plastid",null,"plastid","mitochondrion","plastid",null,null,"AT1G17050.1"]
["Os12t0541300-01","Rice","RESPIRATORY BURST OXIDASE HOMOLOG HNADPH oxidase, Respiratory burst oxidase homolog, Ethylene-induced aerenchyma formation in roots under oxygen-deficient conditions (Os12t0541300-01)","12",909,{"v":102129,"d":"102129.000"},{"v":9.36472,"d":"9.365"},{"v":-0.20451,"d":"-0.205"},"plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G51060.1"]
["Os12t0548300-03","Rice","NUCLEOSIDE DIPHOSPHATE KINASE 2, Nucleoside diphosphate kinase 2, White stripe leaf 12Nucleoside diphosphate kinase, Regulation of chloroplast development and chlorophyll biosynthesis, Abiotic stress response (ABA and salinity) (Os12t0548300-01);Similar to Nucleoside diphosphate kinase (Fragment). (Os12t0548300-02);Similar to Nucleoside diphosphate kinase (Fragment). (Os12t0548300-03)","12",147,{"v":16314.7,"d":"16314.700"},{"v":6.52072,"d":"6.521"},{"v":-0.221088,"d":"-0.221"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G63310.1"]
["Os01t0104900-01","Rice","Transferase family protein. (Os01t0104900-01);Hypothetical conserved gene. (Os01t0104900-02)","1",468,{"v":51266.8,"d":"51266.800"},{"v":7.01276,"d":"7.013"},{"v":0.117094,"d":"0.117"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","plasma membrane",null,null,"AT1G27620.1"]
["Os01t0104900-02","Rice","Transferase family protein. (Os01t0104900-01);Hypothetical conserved gene. (Os01t0104900-02)","1",317,{"v":34756.8,"d":"34756.800"},{"v":6.38055,"d":"6.381"},{"v":0.0883281,"d":"0.088"},"cytosol,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT1G27620.1"]
["Os01t0195400-00","Rice","Harpin-induced 1 domain containing protein. (Os01t0195400-00)","1",288,{"v":29786.2,"d":"29786.200"},{"v":10.4524,"d":"10.452"},0.075,"plasma membrane,endoplasmic reticulum,plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","plasma membrane,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane",null,null,"AT1G17620.1"]
["Os01t0217000-01","Rice","trichome birefringence-like 19Protein of unknown function DUF231, plant domain containing protein. (Os01t0217000-01);Similar to Alpha galactosidase. (Os01t0217000-02)","1",395,{"v":43926.5,"d":"43926.500"},{"v":9.00966,"d":"9.010"},{"v":-0.12962,"d":"-0.130"},"mitochondrion","mitochondrion,extracellular,golgi,peroxisome,plastid","plastid",null,null,"plastid","mitochondrion","peroxisome,extracellular","mitochondrion","mitochondrion",null,"mitochondrion","plastid","golgi",null,null,"AT1G29050.1"]
["Os01t0218700-02","Rice","ABC TRANSPORTER D FAMILY MEMBER 1ABC transporter integral membrane type 1 domain containing protein. (Os01t0218700-01);Similar to peroxisomal membrane ABC transporter family, PMP family. (Os01t0218700-02)","1",166,{"v":18534.7,"d":"18534.700"},{"v":4.81722,"d":"4.817"},{"v":-0.400602,"d":"-0.401"},"cytosol,peroxisome","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,"peroxisome",null,"cytosol","cytosol,nucleus",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT1G54350.1"]
["Os01t0248300-00","Rice","Similar to Pathogen-related protein. (Os01t0248300-00)","1",240,{"v":27147.1,"d":"27147.100"},{"v":5.40393,"d":"5.404"},{"v":-0.509583,"d":"-0.510"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","mitochondrion,cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G78780.3"]
["Os01t0262700-02","Rice","Similar to predicted protein. (Os01t0262700-01);Hypothetical conserved gene. (Os01t0262700-02)","1",140,{"v":15677.7,"d":"15677.700"},{"v":5.67579,"d":"5.676"},{"v":0.113571,"d":"0.114"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT4G36440.1"]
["Os01t0308600-00","Rice","Conserved hypothetical protein. (Os01t0308600-00)","1",170,{"v":18485.4,"d":"18485.400"},12.072,{"v":-0.421765,"d":"-0.422"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT3G62650.1"]
["Os01t0367100-01","Rice","photoassimilate defective1, photoassimilate defective 1Chloroplast-localized UDP-glucose epimerase (UGE), Galactolipid biosynthesis for chloroplast membranes, Photosynthetic capability and carbon assimilate homeostasis (Os01t0367100-01);NAD(P)-binding domain containing protein. (Os01t0367100-02);Similar to binding / catalytic. (Os01t0367100-03);NAD(P)-binding domain containing protein. (Os01t0367100-04)","1",340,{"v":36729.8,"d":"36729.800"},{"v":8.47985,"d":"8.480"},{"v":-0.274706,"d":"-0.275"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G39080.1"]
["Os01t0367100-02","Rice","photoassimilate defective1, photoassimilate defective 1Chloroplast-localized UDP-glucose epimerase (UGE), Galactolipid biosynthesis for chloroplast membranes, Photosynthetic capability and carbon assimilate homeostasis (Os01t0367100-01);NAD(P)-binding domain containing protein. (Os01t0367100-02);Similar to binding / catalytic. (Os01t0367100-03);NAD(P)-binding domain containing protein. (Os01t0367100-04)","1",340,{"v":36729.8,"d":"36729.800"},{"v":8.47985,"d":"8.480"},{"v":-0.274706,"d":"-0.275"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G39080.1"]
["Os01t0367400-01","Rice","Conserved hypothetical protein. (Os01t0367400-01);Similar to cDNA clone:001-121-G01, full insert sequence. (Os01t0367400-02)","1",288,{"v":31130.1,"d":"31130.100"},{"v":9.50266,"d":"9.503"},{"v":-0.244792,"d":"-0.245"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT2G39080.1"]
["Os01t0524500-01","Rice","transcription factor MYBS1Conserved hypothetical protein. (Os01t0524500-01);Transcription factor, Regulation of nutrient mobilization in germination (Os01t0524500-02)","1",170,{"v":18199.7,"d":"18199.700"},{"v":12.8617,"d":"12.862"},{"v":-1.27059,"d":"-1.271"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT5G47490.1"]
["Os01t0544200-02","Rice","Similar to P450. (Os01t0544200-01);Similar to Bx2-like protein. (Os01t0544200-02);Similar to P450. (Os01t0544200-03)","1",200,{"v":23199.1,"d":"23199.100"},{"v":9.55071,"d":"9.551"},{"v":-0.2415,"d":"-0.242"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","plastid","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT3G48290.2"]
["Os01t0598600-01","Rice","Peptidase A1 domain containing protein. (Os01t0598600-01);Similar to predicted protein. (Os01t0598600-03)","1",500,{"v":51145.9,"d":"51145.900"},{"v":8.53088,"d":"8.531"},{"v":0.1726,"d":"0.173"},"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane","msms:nucleus:18022940,msms:extracellular:19038476,msms:cytosol:19685898,msms:nucleus:26035336,msms:plastid:27992503","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G01300.1"]
["Os01t0604000-01","Rice","Hypothetical protein. (Os01t0604000-01)","1",226,{"v":25142.4,"d":"25142.400"},{"v":12.6784,"d":"12.678"},{"v":-1.19159,"d":"-1.192"},"mitochondrion,nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus"]
["Os01t0631700-01","Rice","Similar to Ser Thr specific protein kinase-like protein. (Os01t0631700-01)","1",509,{"v":56916.3,"d":"56916.300"},{"v":9.01905,"d":"9.019"},{"v":-0.363851,"d":"-0.364"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane","msms:plasma membrane:18260611,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G59110.1"]
["Os01t0678600-03","Rice","Ribosomal protein S20 family protein. (Os01t0678600-01);Similar to ribosomal protein rpS20. (Os01t0678600-02);Similar to ribosomal protein rpS20. (Os01t0678600-03)","1",56,{"v":6362.71,"d":"6362.710"},{"v":10.9535,"d":"10.954"},{"v":-0.7,"d":"-0.700"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G15190.1"]
["Os01t0680200-01","Rice","PURINE PERMEASE 4Protein of unknown function DUF250 domain containing protein. (Os01t0680200-01)","1",387,{"v":40372,"d":"40372.000"},{"v":9.67366,"d":"9.674"},{"v":0.545478,"d":"0.545"},"cytosol,plasma membrane,vacuole","cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","cytosol","plastid,golgi",null,"plastid",null,null,"vacuole","plasma membrane",null,null,"AT1G30840.1"]
["Os01t0692300-01","Rice","Protein of unknown function DUF827, plant domain containing protein. (Os01t0692300-01)","1",609,{"v":68121.2,"d":"68121.200"},{"v":10.1308,"d":"10.131"},{"v":-0.772742,"d":"-0.773"},"plasma membrane,extracellular","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus","msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G66840.1"]
["Os01t0702500-01","Rice","LATE EMBRYOGENESIS ABUNDANT PROTEIN 24Similar to Dehydrin Rab25. (Os01t0702500-01)","1",188,{"v":19343.4,"d":"19343.400"},{"v":9.94431,"d":"9.944"},{"v":-0.862234,"d":"-0.862"},"cytosol,plastid","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT5G66400.1"]
["Os01t0710800-01","Rice","Conserved hypothetical protein. (Os01t0710800-01);Hypothetical protein. (Os01t0710800-02)","1",93,{"v":9757.92,"d":"9757.920"},{"v":10.1645,"d":"10.165"},{"v":-0.0451613,"d":"-0.045"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"plastid","plastid","plastid",null,null,"AT5G27870.1"]
["Os01t0743400-01","Rice","Similar to Tryptophanyl-tRNA synthetase (Fragment). (Os01t0743400-01);Similar to predicted protein. (Os01t0743400-02)","1",393,{"v":43337.5,"d":"43337.500"},{"v":8.87122,"d":"8.871"},{"v":-0.217812,"d":"-0.218"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","plastid","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT2G25840.1"]
["Os01t0805000-01","Rice","50S ribosomal protein L34. (Os01t0805000-01)","1",167,{"v":17641.6,"d":"17641.600"},13.085,{"v":-0.18024,"d":"-0.180"},"plastid","plastid,nucleus","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","nucleus","plastid",null,null,"AT1G29070.1"]
["Os01t0851600-01","Rice","3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os01t0851600-01)","1",268,{"v":29007.6,"d":"29007.600"},{"v":10.1837,"d":"10.184"},{"v":0.432836,"d":"0.433"},"endoplasmic reticulum,golgi","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","plastid",null,"mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plasma membrane,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","endoplasmic reticulum",null,null,"AT2G38050.1"]
["Os01t0862200-02","Rice","Conserved hypothetical protein. (Os01t0862200-01);Conserved hypothetical protein. (Os01t0862200-02)","1",186,{"v":20032.6,"d":"20032.600"},{"v":8.61201,"d":"8.612"},{"v":0.0650538,"d":"0.065"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT2G36145.1"]
["Os01t0878700-02","Rice","amino acid permease 10D, amino acid permease 6, amino acid/auxin permease 6, quantitative trait locus (QTL) for GPC (grain protein content) on chromosome 1Amino acid transporter, transmembrane domain containing protein. (Os01t0878700-02);Amino acid transporter, transmembrane domain containing protein. (Os01t0878700-03)","1",466,{"v":50088.5,"d":"50088.500"},{"v":8.67971,"d":"8.680"},{"v":0.621674,"d":"0.622"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G10010.1"]
["Os01t0889800-01","Rice","SULFURTRANSFERASE 13Rhodanese-like domain containing protein. (Os01t0889800-01)","1",361,{"v":39281.8,"d":"39281.800"},{"v":6.32982,"d":"6.330"},{"v":-0.280332,"d":"-0.280"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","mitochondrion","plastid,nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","cytosol","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G25480.1"]
["Os01t0919700-01","Rice","Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0919700-01)","1",379,{"v":42407.4,"d":"42407.400"},{"v":7.58347,"d":"7.583"},{"v":-0.339578,"d":"-0.340"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G12830.1"]
["Os01t0926600-01","Rice","glycosyltransferase gene family 47 member A, glycosyltransferase 47ASimilar to Pectin-glucuronyltransferase. (Os01t0926600-01)","1",415,{"v":46904.5,"d":"46904.500"},{"v":6.50873,"d":"6.509"},{"v":-0.149398,"d":"-0.149"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G27440.1"]
["Os01t0944000-02","Rice","Conserved hypothetical protein. (Os01t0944000-01);Hypothetical conserved gene. (Os01t0944000-02);Conserved hypothetical protein. (Os01t0944000-03)","1",80,{"v":8714.12,"d":"8714.120"},{"v":8.56642,"d":"8.566"},{"v":-0.5525,"d":"-0.553"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G12160.1"]
["Os02t0101500-02","Rice","hydroxypyruvate reductase 1, peroxisomal HPR1Peroxisomal hydroxypyruvate reductase, NADH-dependent HPR, Photorespiratory metabolism (Os02t0101500-01);Similar to NADH-dependent hydroxypyruvate reductase (EC 1.1.1.29) (Fragment). (Os02t0101500-02)","2",386,{"v":42077.1,"d":"42077.100"},{"v":7.03431,"d":"7.034"},{"v":0.0212435,"d":"0.021"},"mitochondrion,extracellular","cytosol,peroxisome,plastid","cytosol",null,"cytosol","plastid","peroxisome","peroxisome",null,"peroxisome","peroxisome",null,"plastid","cytosol","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G68010.1"]
["Os02t0115801-00","Rice","Hypothetical gene. (Os02t0115801-00)","2",94,{"v":10667,"d":"10667.000"},{"v":10.6725,"d":"10.673"},{"v":-0.419149,"d":"-0.419"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol"]
["Os02t0124800-01","Rice","Conserved hypothetical protein. (Os02t0124800-01)","2",22,{"v":2403.07,"d":"2403.070"},{"v":12.5317,"d":"12.532"},{"v":0.495455,"d":"0.495"},"mitochondrion","mitochondrion,vacuole,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","mitochondrion,vacuole,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"AT1G64720.1"]
["Os02t0152900-01","Rice","YELLOW LEAF 1Nucleus-encoded chloroplast protein, Chloroplast development, Biogenesis of chloroplast ATP synthase (Os02t0152900-01)","2",165,{"v":17090.2,"d":"17090.200"},{"v":10.6543,"d":"10.654"},{"v":-0.393939,"d":"-0.394"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G30475.2"]
["Os02t0169900-01","Rice","inositol monophosphatase 2Inositol monophosphatase family protein. (Os02t0169900-01);Inositol monophosphatase family protein. (Os02t0169900-02);Similar to IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase/ inositol-1(or 4)-monophosphatase. (Os02t0169900-03)","2",364,{"v":38912.5,"d":"38912.500"},{"v":6.94343,"d":"6.943"},{"v":-0.0711538,"d":"-0.071"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","cytosol","msms:plastid:17189339,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G31190.1"]
["Os02t0174100-01","Rice","RICE SQUAMOSA PROMOTER-BINDING-LIKE 4Similar to Isoform 2 of Squamosa promoter-binding-like protein 4. (Os02t0174100-01);SBP domain containing protein. (Os02t0174100-02);Similar to Isoform 2 of Squamosa promoter-binding-like protein 4. (Os02t0174100-03)","2",234,{"v":26232,"d":"26232.000"},{"v":10.0702,"d":"10.070"},{"v":-0.697009,"d":"-0.697"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G43270.1"]
["Os02t0176100-01","Rice","Similar to predicted protein. (Os02t0176100-01);Protein kinase-like domain containing protein. (Os02t0176100-02);Similar to predicted protein. (Os02t0176100-03)","2",621,{"v":66308.1,"d":"66308.100"},{"v":7.58318,"d":"7.583"},{"v":-0.245411,"d":"-0.245"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT2G20850.2"]
["Os02t0189000-01","Rice","Similar to Chloroplast 30S ribosomal protein S21 (Fragment). (Os02t0189000-01)","2",146,{"v":16735.9,"d":"16735.900"},{"v":11.0282,"d":"11.028"},{"v":-0.991096,"d":"-0.991"},"plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","nucleus","msms:nucleus:19621931,msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G27160.2"]
["Os02t0246600-02","Rice","Conserved hypothetical protein. (Os02t0246600-01);Conserved hypothetical protein. (Os02t0246600-02)","2",77,{"v":8270.75,"d":"8270.750"},{"v":9.66042,"d":"9.660"},{"v":-0.568831,"d":"-0.569"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT1G65580.2"]
["Os02t0255700-02","Rice","FLO2-LIKE1Conserved hypothetical protein. (Os02t0255700-01);Hypothetical conserved gene. (Os02t0255700-02)","2",135,{"v":13492.5,"d":"13492.500"},{"v":3.67333,"d":"3.673"},{"v":-1.11111,"d":"-1.111"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G28080.1"]
["Os02t0273800-01","Rice","Multi antimicrobial extrusion protein MatE domain containing protein. (Os02t0273800-01);Multi antimicrobial extrusion protein MatE domain containing protein. (Os02t0273800-02);Non-protein coding transcript. (Os02t0273800-03)","2",719,{"v":79258,"d":"79258.000"},{"v":9.49275,"d":"9.493"},{"v":-0.602503,"d":"-0.603"},"endoplasmic reticulum,plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","endoplasmic reticulum",null,null,"AT2G32230.1"]
["Os02t0301100-01","Rice","SWEET4RAG1-activating protein 1 homologue domain containing protein. (Os02t0301100-01)","2",259,{"v":28048.1,"d":"28048.100"},{"v":9.5917,"d":"9.592"},{"v":0.744015,"d":"0.744"},"plasma membrane","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plasma membrane,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plasma membrane","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT4G10850.1"]
["Os02t0328300-02","Rice","Phenol hydroxylase reductase family protein. (Os02t0328300-01);Phenol hydroxylase reductase family protein. (Os02t0328300-02)","2",287,{"v":30697.7,"d":"30697.700"},{"v":5.34514,"d":"5.345"},{"v":0.0285714,"d":"0.029"},"plastid","mitochondrion,peroxisome,plastid","plastid",null,"plastid","plastid","peroxisome","mitochondrion","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G15140.1"]
["Os02t0503100-00","Rice","Similar to flavonoid 3-monooxygenase. (Os02t0503100-00)","2",578,{"v":62946.1,"d":"62946.100"},{"v":11.0241,"d":"11.024"},{"v":-0.316263,"d":"-0.316"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid",null,"mitochondrion","endoplasmic reticulum,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G45550.1"]
["Os02t0532900-01","Rice","Glycoside hydrolase, family 17 protein. (Os02t0532900-01);Similar to H0717B12.10 protein. (Os02t0532900-02)","2",391,{"v":41807.6,"d":"41807.600"},{"v":7.32087,"d":"7.321"},{"v":0.248082,"d":"0.248"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT2G27500.2"]
["Os02t0577900-01","Rice","Conserved hypothetical protein. (Os02t0577900-01)","2",120,{"v":12908.7,"d":"12908.700"},{"v":11.8617,"d":"11.862"},{"v":-0.313333,"d":"-0.313"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","cytosol","plastid",null,null,"AT5G28550.1"]
["Os02t0588300-01","Rice","Similar to Fimbrin 1 (AtFIM1). (Os02t0588300-01)","2",673,{"v":75694.6,"d":"75694.600"},{"v":5.01425,"d":"5.014"},{"v":-0.298663,"d":"-0.299"},"plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"cytosol","plastid","cytosol","cytosol","plastid","mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G35700.1"]
["Os02t0608600-01","Rice","Amino acid-binding ACT domain containing protein. (Os02t0608600-01)","2",340,{"v":37425,"d":"37425.000"},{"v":5.15004,"d":"5.150"},{"v":-0.107059,"d":"-0.107"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plastid:17189339,msms:plastid:21433289,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G31810.1"]
["Os02t0608900-01","Rice","Similar to Epstein-Barr virus (B95-8 isolate) U2-IR2 domain encoding nuclear protein EBNA2, complete cds. (Os02t0608900-01);Similar to Epstein-Barr virus (B95-8 isolate) U2-IR2 domain encoding nuclear protein EBNA2, complete cds. (Os02t0608900-02)","2",370,{"v":41078,"d":"41078.000"},{"v":9.62587,"d":"9.626"},{"v":-0.48027,"d":"-0.480"},"plastid","cytosol,peroxisome,plastid","plastid",null,null,"plastid","cytosol","plastid",null,"plastid",null,"plastid","plastid","peroxisome",null,null,"AT2G43950.1"]
["Os02t0639800-03","Rice","RING DOMAIN-CONTAINING PROTEIN 2Hypothetical gene. (Os02t0639800-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0639800-02);Hypothetical gene. (Os02t0639800-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0639800-04);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0639800-05)","2",77,{"v":8595.41,"d":"8595.410"},{"v":12.3086,"d":"12.309"},{"v":-0.705195,"d":"-0.705"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT3G16730.1"]
["Os02t0654300-01","Rice","Similar to Protein kinase KIPK. (Os02t0654300-01)","2",690,{"v":75003,"d":"75003.000"},{"v":6.55786,"d":"6.558"},{"v":-0.328696,"d":"-0.329"},"cytosol","mitochondrion,cytosol,vacuole,nucleus","nucleus",null,"vacuole",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G44830.2"]
["Os02t0668500-02","Rice","Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os02t0668500-01);Similar to cellular retinaldehyde-binding/triple function, C-terminal. (Os02t0668500-02)","2",233,{"v":25644,"d":"25644.000"},10.302,{"v":0.0317597,"d":"0.032"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"plastid","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT4G35750.1"]
["Os02t0720900-02","Rice","Peptidase A1 domain containing protein. (Os02t0720900-01);Hypothetical protein. (Os02t0720900-02);Similar to Aspartic proteinase nepenthesin-1. (Os02t0720900-04)","2",90,{"v":10423.5,"d":"10423.500"},{"v":11.8935,"d":"11.894"},{"v":-0.598889,"d":"-0.599"},"mitochondrion","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,null,"plastid","extracellular","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT2G19360.1"]
["Os02t0751600-01","Rice","FK506 binding protein 16-2Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0751600-01);Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os02t0751600-02)","2",230,{"v":23447.3,"d":"23447.300"},{"v":9.05113,"d":"9.051"},{"v":0.11,"d":"0.110"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G39710.3"]
["Os02t0754300-01","Rice","Ribosomal protein L29 family protein. (Os02t0754300-01)","2",165,{"v":18333.6,"d":"18333.600"},{"v":11.5113,"d":"11.511"},{"v":-0.475152,"d":"-0.475"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:nucleus:19621931,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G65220.1"]
["Os02t0805800-02","Rice","Aminoglycoside phosphotransferase domain containing protein. (Os02t0805800-01);Similar to cDNA clone:J013094E21, full insert sequence. (Os02t0805800-02)","2",233,{"v":26165.3,"d":"26165.300"},{"v":11.1062,"d":"11.106"},{"v":0.0982833,"d":"0.098"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT2G39190.2"]
["Os02t0815700-01","Rice","C-terminal processing peptidase 2, C-TERMINAL PROCESSING PEPTIDASE 2Similar to D1 protease (Fragment). (Os02t0815700-01)","2",228,{"v":25390.9,"d":"25390.900"},{"v":11.0671,"d":"11.067"},{"v":-0.120614,"d":"-0.121"},"plastid","cytosol,plastid,nucleus","plastid",null,"cytosol","plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G17740.2"]
["Os02t0817800-03","Rice","TELOMERE BINDING PROTEIN 1Similar to Telomere binding protein-1. (Os02t0817800-01);Similar to Telomere binding protein-1. (Os02t0817800-02);Telomere binding protein , Establishing  and /or maintaining an active telomere configuration (Os02t0817800-03)","2",633,{"v":69512.9,"d":"69512.900"},{"v":8.71312,"d":"8.713"},{"v":-0.475829,"d":"-0.476"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","nucleus",null,null,"mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT1G07540.1"]
["Os03t0115300-00","Rice","Pentatricopeptide repeat domain containing protein. (Os03t0115300-00)","3",490,{"v":54930.9,"d":"54930.900"},{"v":8.39162,"d":"8.392"},{"v":-0.188367,"d":"-0.188"},"plastid","cytosol,plastid","cytosol",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G53170.1"]
["Os03t0120200-02","Rice","REMORIN 6.2Remorin, C-terminal region domain containing protein. (Os03t0120200-01);Similar to Remorin, C-terminal region family protein, expressed. (Os03t0120200-02);Remorin, C-terminal region domain containing protein. (Os03t0120200-03)","3",398,{"v":43552.8,"d":"43552.800"},{"v":6.80278,"d":"6.803"},{"v":-0.783668,"d":"-0.784"},"nucleus","mitochondrion,extracellular,nucleus,cytosol,plasma membrane","nucleus",null,"extracellular",null,"cytosol","plasma membrane,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G02170.4"]
["Os03t0126300-02","Rice","Similar to cDNA clone:001-042-G03, full insert sequence. (Os03t0126300-01);Similar to cDNA clone:001-042-G03, full insert sequence. (Os03t0126300-02);Similar to RPE1 protein. (Os03t0126300-03);Similar to cDNA clone:001-042-G03, full insert sequence. (Os03t0126300-04)","3",311,{"v":33701.4,"d":"33701.400"},{"v":6.15385,"d":"6.154"},{"v":-0.129582,"d":"-0.130"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G44600.1"]
["Os03t0128400-01","Rice","Conserved hypothetical protein. (Os03t0128400-01)","3",128,{"v":13632.6,"d":"13632.600"},{"v":11.0988,"d":"11.099"},{"v":0.289844,"d":"0.290"},"plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,null,"plastid","cytosol","plasma membrane,nucleus","plastid","mitochondrion",null,"plastid","plastid","plasma membrane",null,null,"AT1G57765.1"]
["Os03t0140100-01","Rice","midchain alkane hydroxylase 1, Cytochrome P450 96B5, P-450 96B5Cytochrome P450 family protein. (Os03t0140100-01);Similar to Cytochrome P450 family protein. (Os03t0140100-02)","3",508,{"v":57303.6,"d":"57303.600"},{"v":8.45548,"d":"8.455"},{"v":-0.0161417,"d":"-0.016"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum",null,null,"AT4G39490.1"]
["Os03t0163200-01","Rice","Protein of unknown function DUF247, plant family protein. (Os03t0163200-01)","3",469,{"v":54233.3,"d":"54233.300"},{"v":8.17152,"d":"8.172"},{"v":-0.387207,"d":"-0.387"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G50170.1"]
["Os03t0169700-01","Rice","OsDof12osAntisense transcript of OsDof12, Functionally unknown protein (Os03t0169700-01)","3",104,{"v":11773.9,"d":"11773.900"},{"v":10.0179,"d":"10.018"},{"v":0.142308,"d":"0.142"},"nucleus","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"extracellular","extracellular","gfp:nucleus:19198875","19198875:Dejun:D:Li,Chunhua:C:Yang,Xiaobing:X:Li,Qiang:Q:Gan,Xianfeng:X:Zhao,Lihuang:L:Zhu:2009","AT4G29070.1"]
["Os03t0176700-00","Rice","Conserved hypothetical protein. (Os03t0176700-00)","3",231,{"v":24774.4,"d":"24774.400"},{"v":8.44907,"d":"8.449"},{"v":-0.300866,"d":"-0.301"},"plastid","plastid,nucleus","nucleus",null,"plastid","plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","nucleus","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT2G26340.1"]
["Os03t0210900-01","Rice","Similar to predicted protein. (Os03t0210900-01)","3",85,{"v":8715.21,"d":"8715.210"},{"v":6.78593,"d":"6.786"},{"v":0.117647,"d":"0.118"},"mitochondrion","mitochondrion,nucleus,endoplasmic reticulum,plasma membrane,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","plasma membrane",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT4G30845.1"]
["Os03t0277000-01","Rice","GDP dissociation inhibitor 3GDP dissociation inhibitor, Negative regulator for Rab, Negative feedback between Rab GDP-GTP cycle and MAPK pathways (Os03t0277000-01)","3",447,{"v":50047.6,"d":"50047.600"},{"v":5.51002,"d":"5.510"},{"v":-0.331767,"d":"-0.332"},"plasma membrane","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G09550.1"]
["Os03t0279700-01","Rice","Similar to ZPT2-12. (Os03t0279700-01)","3",191,{"v":19709.6,"d":"19709.600"},{"v":7.09923,"d":"7.099"},{"v":-0.125654,"d":"-0.126"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G28710.1"]
["Os03t0309800-02","Rice","Similar to PPR2. (Os03t0309800-01);Similar to PPR2. (Os03t0309800-02)","3",501,{"v":56836.6,"d":"56836.600"},{"v":9.09621,"d":"9.096"},{"v":-0.438723,"d":"-0.439"},"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","plastid","plastid","mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT3G06430.1"]
["Os03t0311300-03","Rice","Similar to HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed. (Os03t0311300-01);Similar to HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed. (Os03t0311300-02);NHL repeat domain containing protein. (Os03t0311300-03)","3",461,{"v":51736,"d":"51736.000"},{"v":7.49422,"d":"7.494"},{"v":-0.242299,"d":"-0.242"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G56500.1"]
["Os03t0364700-01","Rice","Transcription elongation factor, TFIIS/CRSP70, N-terminal domain containing protein. (Os03t0364700-01)","3",274,{"v":30032.2,"d":"30032.200"},{"v":12.0239,"d":"12.024"},{"v":-0.544891,"d":"-0.545"},"nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT5G05140.1"]
["Os03t0389175-00","Rice","Hypothetical gene. (Os03t0389175-00)","3",126,{"v":13573.9,"d":"13573.900"},{"v":12.2248,"d":"12.225"},{"v":0.270635,"d":"0.271"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular",null,null,"AT1G54710.1"]
["Os03t0452300-01","Rice","Ribosomal protein S5, bacterial-type domain containing protein. (Os03t0452300-01)","3",326,{"v":34887.3,"d":"34887.300"},{"v":4.67929,"d":"4.679"},{"v":-0.315644,"d":"-0.316"},"plastid","cytosol,plastid","plastid",null,"cytosol","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:nucleus:19621931,msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G33800.1"]
["Os03t0617500-01","Rice","CYCLIN-D5-2Cyclin, C-terminal domain containing protein. (Os03t0617500-01);Similar to Cyclin-D5-1. (Os03t0617500-02)","3",376,{"v":39582.4,"d":"39582.400"},{"v":4.54501,"d":"4.545"},{"v":0.0234043,"d":"0.023"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G37630.1"]
["Os03t0666700-01","Rice","TRAM, LAG1 and CLN8 homology domain containing protein. (Os03t0666700-01)","3",266,{"v":30516,"d":"30516.000"},{"v":9.54234,"d":"9.542"},{"v":0.555263,"d":"0.555"},"cytosol,plasma membrane,golgi","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",{"$nulls":3},"golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT1G31300.2"]
["Os03t0673800-01","Rice","HYPEROSMOLALITY-GATED CALCIUM-PERMEABLE CHANNEL 2.2Conserved hypothetical protein. (Os03t0673800-01);Similar to predicted protein. (Os03t0673800-02)","3",130,{"v":14920.6,"d":"14920.600"},{"v":8.92483,"d":"8.925"},{"v":0.713846,"d":"0.714"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT1G58520.1"]
["Os03t0686500-02","Rice","Conserved hypothetical protein. (Os03t0686500-01);Conserved hypothetical protein. (Os03t0686500-02)","3",117,{"v":12216.2,"d":"12216.200"},{"v":6.67091,"d":"6.671"},{"v":-0.539316,"d":"-0.539"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,plastid","nucleus",null,"endoplasmic reticulum",null,"cytosol","mitochondrion,extracellular,plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G16780.1"]
["Os03t0713200-01","Rice","Conserved hypothetical protein. (Os03t0713200-01)","3",170,{"v":19409.1,"d":"19409.100"},{"v":9.72371,"d":"9.724"},{"v":-0.706471,"d":"-0.706"},"plastid","cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","plastid","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT2G01755.1"]
["Os03t0737000-01","Rice","cystathionine b-synthase domain containing protein OsCBSX4, CBS domain containing protein OsCBSX4Cystathionine beta-synthase, core domain containing protein. (Os03t0737000-01);Hypothetical gene. (Os03t0737000-02);Similar to CBS domain containing protein, expressed. (Os03t0737000-03)","3",205,{"v":22309,"d":"22309.000"},{"v":9.64222,"d":"9.642"},{"v":-0.133659,"d":"-0.134"},"mitochondrion","mitochondrion,plastid","mitochondrion",null,"mitochondrion","plastid","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion","gfp:nucleus:15659629,msms:mitochondrion:16429260,msms:plastid:17189339,msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:plastid:27992503","15659629:Kazuki:K:Moriguchi,Tadzunu:T:Suzuki,Yukihiro:Y:Ito,Yukiko:Y:Yamazaki,Yasuo:Y:Niwa,Nori:N:Kurata:2005,23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G10860.1"]
["Os03t0737000-02","Rice","cystathionine b-synthase domain containing protein OsCBSX4, CBS domain containing protein OsCBSX4Cystathionine beta-synthase, core domain containing protein. (Os03t0737000-01);Hypothetical gene. (Os03t0737000-02);Similar to CBS domain containing protein, expressed. (Os03t0737000-03)","3",71,{"v":7990.06,"d":"7990.060"},{"v":4.47837,"d":"4.478"},{"v":1.02676,"d":"1.027"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","msms:mitochondrion:16429260,msms:plastid:17189339","16429260:Katharine A:KA:Howell,A Harvey:AH:Millar,James:J:Whelan:2006,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G48080.1"]
["Os03t0738400-02","Rice","serine hydroxymethyltransferase 1, chlorophyll-deficient mutant 1Similar to Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT). (Os03t0738400-01);Similar to Serine hydroxymethyltransferase. (Os03t0738400-02);Similar to Serine hydroxymethyltransferase. (Os03t0738400-03)","3",87,{"v":9627.8,"d":"9627.800"},{"v":11.7283,"d":"11.728"},{"v":-0.118391,"d":"-0.118"},"mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","mitochondrion,plastid",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,null,"AT1G49660.1"]
["Os03t0749300-03","Rice","periplasmic beta-glucosidase 1Similar to Exoglucanase precursor. (Os03t0749300-01);Similar to Exoglucanase precursor. (Os03t0749300-02);Similar to Exoglucanase. (Os03t0749300-03);Similar to Cell wall beta-glucosidase. (Os03t0749300-04)","3",475,{"v":51611.6,"d":"51611.600"},{"v":6.43671,"d":"6.437"},{"v":-0.0911579,"d":"-0.091"},"cytosol,plasma membrane","mitochondrion,cytosol,peroxisome,plasma membrane","cytosol",{"$nulls":3},"cytosol","mitochondrion,peroxisome",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT5G04885.1"]
["Os03t0784000-01","Rice","Similar to deoxyribodipyrimidine photolyase. (Os03t0784000-01);Similar to deoxyribodipyrimidine photolyase. (Os03t0784000-02);FAD dependent oxidoreductase family protein. (Os03t0784000-03)","3",70,{"v":6664.19,"d":"6664.190"},{"v":12.3752,"d":"12.375"},{"v":0.638571,"d":"0.639"},"extracellular,plastid","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular","extracellular",null,null,"AT1G55980.1"]
["Os03t0799200-01","Rice","Protein of unknown function DUF593 family protein. (Os03t0799200-01)","3",727,{"v":81989.9,"d":"81989.900"},{"v":4.5048,"d":"4.505"},{"v":-0.55956,"d":"-0.560"},"vacuole,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","vacuole",null,null,"AT1G70750.1"]
["Os03t0811200-01","Rice","BRCT domain containing protein. (Os03t0811200-01)","3",883,{"v":96606.4,"d":"96606.400"},{"v":7.40081,"d":"7.401"},{"v":-0.381767,"d":"-0.382"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G11780.1"]
["Os03t0823800-02","Rice","Similar to Permease 1. (Os03t0823800-01);Similar to permease I. (Os03t0823800-02)","3",249,{"v":27072.6,"d":"27072.600"},{"v":9.61669,"d":"9.617"},{"v":0.387149,"d":"0.387"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,null,"AT5G49990.2"]
["Os03t0837900-01","Rice","Streptomyces cyclase/dehydrase family protein. (Os03t0837900-01)","3",722,{"v":81009.5,"d":"81009.500"},{"v":9.62539,"d":"9.625"},{"v":-0.451801,"d":"-0.452"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G08720.1"]
["Os03t0856700-01","Rice","GIBBERELLIN 20-OXIDASE 1Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (Os20ox). (Os03t0856700-01);GA 20-oxidase1, GA metabolism (Os03t0856700-02)","3",372,{"v":42258.1,"d":"42258.100"},{"v":6.40664,"d":"6.407"},{"v":-0.357796,"d":"-0.358"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT4G25420.1"]
["Os03t0861100-01","Rice","Conserved hypothetical protein. (Os03t0861100-01)","3",{"v":1256,"d":"1,256"},{"v":139422,"d":"139422.000"},{"v":6.76653,"d":"6.767"},{"v":-0.85199,"d":"-0.852"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G43310.2"]
["Os04t0173300-01","Rice","Hypothetical gene. (Os04t0173300-01);Similar to Transmembrane protein 115. (Os04t0173300-02);Conserved hypothetical protein. (Os04t0173300-03)","4",89,{"v":10109.3,"d":"10109.300"},{"v":10.4432,"d":"10.443"},{"v":-0.353933,"d":"-0.354"},"plastid","mitochondrion,vacuole,plastid,nucleus","nucleus",null,null,"mitochondrion","plastid","nucleus","plastid","plastid",null,"plastid","nucleus","vacuole",null,null,"AT1G78955.5"]
["Os04t0197500-00","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os04t0197500-00)","4",456,{"v":50411.8,"d":"50411.800"},{"v":9.09617,"d":"9.096"},{"v":0.00482456,"d":"0.005"},"plastid","mitochondrion,extracellular,plastid,golgi","plastid",null,"extracellular","plastid","mitochondrion","plastid","plastid","mitochondrion",null,"plastid","plastid","golgi",null,null,"AT3G29630.2"]
["Os04t0380200-02","Rice","Conserved hypothetical protein. (Os04t0380200-01);Hypothetical conserved gene. (Os04t0380200-02)","4",192,{"v":21057,"d":"21057.000"},{"v":9.17379,"d":"9.174"},{"v":-1.07396,"d":"-1.074"},"mitochondrion,nucleus","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT3G01860.1"]
["Os04t0397500-00","Rice","Similar to gt-2-related. (Os04t0397500-00)","4",65,{"v":7170.6,"d":"7170.600"},{"v":4.61325,"d":"4.613"},{"v":-0.327692,"d":"-0.328"},"cytosol,nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,"peroxisome",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G33550.1"]
["Os04t0430200-02","Rice","PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os04t0430200-01);Similar to phospholipase C. (Os04t0430200-02)","4",51,{"v":5285.56,"d":"5285.560"},{"v":11.4812,"d":"11.481"},{"v":0.521569,"d":"0.522"},"mitochondrion,extracellular,plastid","mitochondrion,extracellular,nucleus,plasma membrane,plastid","nucleus",null,null,"mitochondrion","extracellular","plasma membrane,nucleus",null,"mitochondrion",null,"mitochondrion",null,"plastid",null,null,"AT2G13680.1"]
["Os04t0430400-01","Rice","Hypothetical conserved gene. (Os04t0430400-01)","4",562,{"v":61048.1,"d":"61048.100"},{"v":7.76607,"d":"7.766"},{"v":-0.163523,"d":"-0.164"},"cytosol,plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT3G19300.1"]
["Os04t0445700-01","Rice","Similar to OSIGBa0140O07.8 protein. (Os04t0445700-01);Similar to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I). (Os04t0445700-02)","4",462,{"v":49100.5,"d":"49100.500"},{"v":7.29633,"d":"7.296"},{"v":-0.136147,"d":"-0.136"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:mitochondrion:19010998","19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G46290.1"]
["Os04t0469800-02","Rice","DWARF SHINKANEAIKOKU OR NOHRIN 28Cytochrome P450 superfamily protein, CYP724B1, Brassinosteroid (BR) biosynthesis, Control of panicle architecture and seed size (Os04t0469800-01);Similar to OSIGBa0124N08.3 protein. (Os04t0469800-02)","4",346,{"v":38557.1,"d":"38557.100"},{"v":7.63994,"d":"7.640"},{"v":0.0708092,"d":"0.071"},"endoplasmic reticulum,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT5G14400.4"]
["Os04t0488600-03","Rice","Uncharacterised protein family Ycf20 domain containing protein. (Os04t0488600-01);Uncharacterised protein family Ycf20 domain containing protein. (Os04t0488600-02);Similar to predicted protein. (Os04t0488600-03);Similar to predicted protein. (Os04t0488600-04)","4",116,{"v":13027,"d":"13027.000"},10.856,{"v":0.356034,"d":"0.356"},"plastid,golgi","mitochondrion,plastid,golgi","plastid",null,"plastid",null,"golgi","plastid",null,"mitochondrion",{"$nulls":3},"plastid",null,null,"AT5G43050.1"]
["Os04t0507700-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 56Lipase, GDSL domain containing protein. (Os04t0507700-01)","4",368,{"v":39960.8,"d":"39960.800"},{"v":4.95739,"d":"4.957"},{"v":0.0951087,"d":"0.095"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT3G04290.1"]
["Os04t0557000-01","Rice","Similar to Genetic modifier. (Os04t0557000-01)","4",350,{"v":39668.8,"d":"39668.800"},{"v":5.91156,"d":"5.912"},{"v":-0.273429,"d":"-0.273"},"plastid","cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT4G11570.1"]
["Os04t0569900-01","Rice","IQ calmodulin-binding region domain containing protein. (Os04t0569900-01);Similar to OSIGBa0111L12.1 protein. (Os04t0569900-02)","4",464,{"v":50142.1,"d":"50142.100"},{"v":11.0498,"d":"11.050"},{"v":-0.741379,"d":"-0.741"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT4G23060.1"]
["Os04t0571300-02","Rice","F-box protein 228Cyclin-like F-box domain containing protein. (Os04t0571300-01);Similar to OSIGBa0127A14.1 protein. (Os04t0571300-02);Cyclin-like F-box domain containing protein. (Os04t0571300-03)","4",202,{"v":22001.1,"d":"22001.100"},{"v":7.33724,"d":"7.337"},{"v":-0.273762,"d":"-0.274"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"mitochondrion","plastid",null,null,"AT3G61060.1"]
["Os04t0586700-01","Rice","Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os04t0586700-01)","4",359,{"v":38547.5,"d":"38547.500"},{"v":6.59859,"d":"6.599"},{"v":-0.222284,"d":"-0.222"},"plasma membrane","plasma membrane,endoplasmic reticulum,plastid,nucleus","nucleus",null,null,"plastid","endoplasmic reticulum","nucleus",null,"plastid",null,"plastid","plastid","plasma membrane","msms:plasma membrane:18260611","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G60220.1"]
["Os04t0629600-02","Rice","Conserved hypothetical protein. (Os04t0629600-01);Similar to Transposase of Tn10 [Oryza sativa (japonica cultivar-group)]. (Os04t0629600-02)","4",323,{"v":36819.3,"d":"36819.300"},{"v":8.30699,"d":"8.307"},{"v":-0.63065,"d":"-0.631"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G53670.1"]
["Os04t0640600-02","Rice","Shikimate kinase 3Shikimate kinase. (Os04t0640600-01);Similar to OSIGBa0138H21-OSIGBa0138E01.13 protein. (Os04t0640600-02)","4",71,{"v":7936.75,"d":"7936.750"},{"v":4.85487,"d":"4.855"},{"v":0.433803,"d":"0.434"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"cytosol","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT4G39540.2"]
["Os04t0649700-02","Rice","Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-01);Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-02);Similar to H0212B02.5 protein. (Os04t0649700-03);Similar to H0212B02.5 protein. (Os04t0649700-04);Similar to H0212B02.5 protein. (Os04t0649700-05)","4",710,{"v":75649.9,"d":"75649.900"},{"v":9.09138,"d":"9.091"},{"v":-0.0447887,"d":"-0.045"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plasma membrane","plasma membrane","msms:extracellular:19038476","19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT5G67200.1"]
["Os04t0649700-05","Rice","Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-01);Serine/threonine protein kinase-related domain containing protein. (Os04t0649700-02);Similar to H0212B02.5 protein. (Os04t0649700-03);Similar to H0212B02.5 protein. (Os04t0649700-04);Similar to H0212B02.5 protein. (Os04t0649700-05)","4",557,{"v":60023.8,"d":"60023.800"},{"v":8.39831,"d":"8.398"},{"v":-0.152065,"d":"-0.152"},"cytosol,peroxisome","mitochondrion,plasma membrane,cytosol,peroxisome,plastid","plastid",null,null,"mitochondrion","cytosol","plasma membrane",null,"mitochondrion",{"$nulls":3},"peroxisome",null,null,"AT5G67200.1"]
["Os04t0683600-01","Rice","Similar to H0306F12.6 protein. (Os04t0683600-01);Similar to H0306F12.6 protein. (Os04t0683600-02)","4",419,{"v":45461.8,"d":"45461.800"},{"v":8.79365,"d":"8.794"},{"v":-0.0584726,"d":"-0.058"},"plasma membrane,extracellular,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","golgi",null,null,"AT1G63430.2"]
["Os04t0685900-02","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 174Similar to Receptor-like protein kinase-like protein (Fragment). (Os04t0685900-01);Similar to H0723C07.6 protein. (Os04t0685900-02)","4",477,{"v":49943.4,"d":"49943.400"},{"v":4.7241,"d":"4.724"},{"v":0.0610063,"d":"0.061"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular","extracellular",null,null,"AT1G66150.1"]
["Os05t0103200-01","Rice","CYCLOPHILIN 20-2Cyclophilin-like domain containing protein. (Os05t0103200-01);Cyclophilin-like domain containing protein. (Os05t0103200-02)","5",250,{"v":26591.9,"d":"26591.900"},{"v":9.84993,"d":"9.850"},{"v":-0.1244,"d":"-0.124"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,golgi,plastid","plastid",null,"plastid","plastid","plastid","mitochondrion,extracellular,endoplasmic reticulum,golgi,plastid","plastid","plastid",null,"plastid","plastid","plastid","gfp:plastid:21087465,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","21087465:Jun Cheul:JC:Ahn,Dae-Won:DW:Kim,Young Nim:YN:You,Min Sook:MS:Seok,Jeong Mee:JM:Park,Hyunsik:H:Hwang,Beom-Gi:BG:Kim,Sheng:S:Luan,Hong-Seog:HS:Park,Hye Sun:HS:Cho:2010,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G13120.2"]
["Os05t0132100-03","Rice","long-chain acyl-CoA synthetase 1AMP-dependent synthetase and ligase domain containing protein. (Os05t0132100-02);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-03);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-04)","5",537,{"v":59808.3,"d":"59808.300"},{"v":5.87573,"d":"5.876"},{"v":-0.10298,"d":"-0.103"},"peroxisome","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,null,"plastid","peroxisome","peroxisome",null,"mitochondrion",null,"mitochondrion",null,"peroxisome",null,null,"AT2G47240.4"]
["Os05t0132100-04","Rice","long-chain acyl-CoA synthetase 1AMP-dependent synthetase and ligase domain containing protein. (Os05t0132100-02);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-03);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-04)","5",29,{"v":3585.38,"d":"3585.380"},{"v":10.2342,"d":"10.234"},{"v":-1.40345,"d":"-1.403"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G47240.4"]
["Os05t0137200-03","Rice","MULTIDRUG RESISTANCE 3Similar to P-glycoprotein ABCB5. (Os05t0137200-01);Similar to MDR-like ABC transporter. (Os05t0137200-02);Similar to MDR-like ABC transporter. (Os05t0137200-03);Non-protein coding transcript. (Os05t0137200-04)","5",305,{"v":32788.3,"d":"32788.300"},{"v":6.31399,"d":"6.314"},{"v":0.0121311,"d":"0.012"},"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","mitochondrion","cytosol,plastid",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G02520.1"]
["Os05t0171200-01","Rice","Embryo-specific 3 family protein. (Os05t0171200-01)","5",180,{"v":18871.5,"d":"18871.500"},{"v":9.07044,"d":"9.070"},{"v":-0.00388889,"d":"-0.004"},"plasma membrane,endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","cytosol,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT2G41475.1"]
["Os05t0349700-01","Rice","YELLOW GREEN LEAF 1Chl synthase, Chl biosynthesis (Os05t0349700-01);Similar to Chlorophyll synthase. (Os05t0349700-02);Similar to Chlorophyll synthase. (Os05t0349700-03)","5",376,{"v":40581.2,"d":"40581.200"},{"v":8.27932,"d":"8.279"},{"v":0.289362,"d":"0.289"},"plastid","plasma membrane,plastid","plastid",null,null,"plastid","plastid","plasma membrane","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G51820.1"]
["Os05t0361900-01","Rice","Mitochondrial carrier protein domain containing protein. (Os05t0361900-01);Similar to Mitochondrial carrier C12B10.09. (Os05t0361900-02);Similar to Mitochondrial carrier C12B10.09. (Os05t0361900-04)","5",288,{"v":30812.6,"d":"30812.600"},{"v":9.05537,"d":"9.055"},{"v":0.141667,"d":"0.142"},"cytosol","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"cytosol","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","peroxisome",null,null,"AT4G39460.2"]
["Os05t0389000-01","Rice","ETHYLENE RESPONSE FACTOR 142Similar to AP2-1 protein (Fragment). (Os05t0389000-01);AP2/ERF transcription factor, Regulation of cell elongation and proliferation in root meristem, Organ size control (Os05t0389000-02)","5",260,{"v":29013.3,"d":"29013.300"},{"v":8.21345,"d":"8.213"},{"v":-0.521923,"d":"-0.522"},"mitochondrion,nucleus","mitochondrion,nucleus","nucleus",null,null,"mitochondrion","mitochondrion",null,null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT2G41710.1"]
["Os05t0406800-02","Rice","Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-01);Leucine-rich repeat, N-terminal domain containing protein. (Os05t0406800-02)","5",394,{"v":42032.9,"d":"42032.900"},{"v":5.0939,"d":"5.094"},{"v":0.233249,"d":"0.233"},"plasma membrane,extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT1G03440.1"]
["Os05t0440800-01","Rice","NIMA-related kinase 4Serine/threonine protein kinase domain containing protein. (Os05t0440800-01)","5",943,{"v":103498,"d":"103498.000"},{"v":6.55642,"d":"6.556"},{"v":-0.545705,"d":"-0.546"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G44200.2"]
["Os05t0480000-01","Rice","STN8 kinaseSerine/threonine protein kinase, Photosystem II (PSII) repair, Phosphorylation of PSII core protein (Os05t0480000-01);Similar to STN8 (Os05t0480000-02)","5",591,{"v":63258,"d":"63258.000"},{"v":8.82985,"d":"8.830"},{"v":-0.063621,"d":"-0.064"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","mitochondrion","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT5G01920.2"]
["Os05t0481000-03","Rice","SEROTONIN N-ACETYLTRANSFERASE-1Serotonin N-acetyltransferase, Melatonin synthesis (Os05t0481000-01);Similar to ATNSI (NUCLEAR SHUTTLE INTERACTING); N-acetyltransferase. (Os05t0481000-02);Similar to ATNSI (NUCLEAR SHUTTLE INTERACTING); N-acetyltransferase. (Os05t0481000-03)","5",166,{"v":17637,"d":"17637.000"},{"v":8.07294,"d":"8.073"},{"v":-0.141566,"d":"-0.142"},"plastid","cytosol,plastid,nucleus","plastid",null,"cytosol","plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G32070.1"]
["Os05t0516400-01","Rice","Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor. (Os05t0516400-01)","5",827,{"v":86212.6,"d":"86212.600"},{"v":9.69908,"d":"9.699"},{"v":-0.435066,"d":"-0.435"},"plastid","cytosol,plasma membrane,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol",null,null,"plastid",null,"plastid","plastid","plasma membrane",null,null,"AT1G52290.1"]
["Os05t0539300-01","Rice","Protein of unknown function DUF295 family protein. (Os05t0539300-01)","5",421,{"v":47353,"d":"47353.000"},{"v":7.53671,"d":"7.537"},{"v":-0.236817,"d":"-0.237"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G49360.2"]
["Os05t0577100-00","Rice","Protein of unknown function DUF617, plant family protein. (Os05t0577100-00)","5",297,{"v":32377.5,"d":"32377.500"},{"v":9.61996,"d":"9.620"},{"v":-0.462963,"d":"-0.463"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT5G23100.1"]
["Os06t0132300-01","Rice","Conserved hypothetical protein. (Os06t0132300-01)","6",208,{"v":23046.9,"d":"23046.900"},{"v":11.1319,"d":"11.132"},{"v":-1.02692,"d":"-1.027"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT2G46735.1"]
["Os06t0179800-01","Rice","Leucine-rich repeat, N-terminal domain containing protein. (Os06t0179800-01);Hypothetical conserved gene. (Os06t0179800-02)","6",606,{"v":67313,"d":"67313.000"},{"v":5.67555,"d":"5.676"},{"v":0.110396,"d":"0.110"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT1G58190.3"]
["Os06t0179800-02","Rice","Leucine-rich repeat, N-terminal domain containing protein. (Os06t0179800-01);Hypothetical conserved gene. (Os06t0179800-02)","6",194,{"v":21664.3,"d":"21664.300"},{"v":5.21284,"d":"5.213"},{"v":0.142784,"d":"0.143"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G58190.3"]
["Os06t0256800-01","Rice","Hypothetical conserved gene. (Os06t0256800-01)","6",213,{"v":22209.9,"d":"22209.900"},{"v":11.6712,"d":"11.671"},{"v":-0.497653,"d":"-0.498"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","nucleus","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"mitochondrion",null,null,"AT3G17950.1"]
["Os06t0314300-01","Rice","Conserved hypothetical protein. (Os06t0314300-01)","6",140,{"v":15118,"d":"15118.000"},11.953,{"v":-0.348571,"d":"-0.349"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","plastid","plastid",null,"plastid","nucleus","plastid",null,null,"AT2G07706.1"]
["Os06t0490700-02","Rice","Conserved hypothetical protein. (Os06t0490700-01);Hypothetical conserved gene. (Os06t0490700-02)","6",128,{"v":14704.5,"d":"14704.500"},{"v":7.43295,"d":"7.433"},{"v":-0.388281,"d":"-0.388"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G05770.2"]
["Os06t0566201-01","Rice","Hypothetical gene. (Os06t0566201-01)","6",292,{"v":31379.1,"d":"31379.100"},{"v":7.2125,"d":"7.213"},{"v":-0.568151,"d":"-0.568"},"endoplasmic reticulum","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT5G51530.2"]
["Os06t0626200-01","Rice","Similar to cDNA, clone: J065099M17, full insert sequence. (Os06t0626200-01);Similar to cDNA, clone: J065099M17, full insert sequence. (Os06t0626200-02)","6",116,{"v":12582.4,"d":"12582.400"},{"v":12.6012,"d":"12.601"},{"v":-0.39569,"d":"-0.396"},"plastid","mitochondrion,nucleus,cytosol,vacuole,plastid","plastid",null,null,"plastid","cytosol","nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","vacuole",null,null,"AT3G59400.1"]
["Os06t0649800-01","Rice","Sdt97Similar to DNA-3-methyladenine glycosylase I. (Os06t0649800-01)","6",428,{"v":45847.9,"d":"45847.900"},{"v":10.1968,"d":"10.197"},{"v":-0.324065,"d":"-0.324"},"plastid","plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT5G57970.2"]
["Os06t0661800-01","Rice","Similar to Cryptochrome DASH, chloroplastic/mitochondrial. (Os06t0661800-01);Similar to Cryptochrome dash (Fragment). (Os06t0661800-02)","6",580,{"v":65101.4,"d":"65101.400"},{"v":9.52634,"d":"9.526"},{"v":-0.430517,"d":"-0.431"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","mitochondrion,plastid",null,"plastid",null,"plastid",null,"plastid","gfp:mitochondrion:23257241,gfp:plastid:23257241","23257241:Lin:L:Xu,Chris:C:Carrie,Simon R:SR:Law,Monika W:MW:Murcha,James:J:Whelan:2013","AT5G24850.1"]
["Os06t0677400-02","Rice","3-hydroxyisobutyrate dehydrogenase domain containing protein. (Os06t0677400-01);Similar to 3-hydroxyisobutyrate dehydrogenase. (Os06t0677400-02)","6",220,{"v":23944.4,"d":"23944.400"},{"v":9.45272,"d":"9.453"},{"v":0.103636,"d":"0.104"},"mitochondrion","mitochondrion,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G20930.1"]
["Os06t0696566-01","Rice","Hypothetical conserved gene. (Os06t0696566-01)","6",87,{"v":10177.1,"d":"10177.100"},{"v":9.93583,"d":"9.936"},{"v":-0.490805,"d":"-0.491"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","extracellular",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT5G57560.1"]
["Os06t0704100-01","Rice","Protein of unknown function DUF547 domain containing protein. (Os06t0704100-01)","6",538,{"v":60304.3,"d":"60304.300"},{"v":8.68998,"d":"8.690"},{"v":-0.267844,"d":"-0.268"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","plastid",null,null,"AT3G13000.1"]
["Os06t0708700-03","Rice","Similar to Nodulin-like protein. (Os06t0708700-01);Similar to Nodulin-like protein. (Os06t0708700-02);Similar to nodulin-like protein. (Os06t0708700-03)","6",111,{"v":12536.3,"d":"12536.300"},{"v":8.65172,"d":"8.652"},{"v":0.364865,"d":"0.365"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular",null,null,"AT3G45870.6"]
["Os07t0130500-01","Rice","Hypothetical protein. (Os07t0130500-01);Hypothetical gene. (Os07t0130500-02);Hypothetical protein. (Os07t0130500-03)","7",96,{"v":10800.1,"d":"10800.100"},{"v":12.1412,"d":"12.141"},{"v":-0.213542,"d":"-0.214"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol","nucleus",null,"mitochondrion",null,"plastid","plastid","cytosol"]
["Os07t0164200-02","Rice","Similar to cDNA clone:001-026-G04, full insert sequence. (Os07t0164200-02)","7",100,{"v":9604.64,"d":"9604.640"},11.493,0.096,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G20935.2"]
["Os07t0245100-02","Rice","Similar to Cytosine deaminase (EC 3.5.4.1). (Os07t0245100-01);Similar to cDNA clone:J023115F20, full insert sequence. (Os07t0245100-02)","7",77,{"v":8505.38,"d":"8505.380"},{"v":8.72144,"d":"8.721"},{"v":-0.0662338,"d":"-0.066"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"cytosol","plastid","mitochondrion","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,null,"AT5G28050.3"]
["Os07t0413700-01","Rice","poly(ADP-ribose) polymerase 1Similar to Poly(ADP)-ribose polymerase (EC 2.4.2.30). (Os07t0413700-01);Similar to Poly. (Os07t0413700-02)","7",977,{"v":110162,"d":"110162.000"},{"v":8.87025,"d":"8.870"},{"v":-0.585466,"d":"-0.585"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus","plastid","mitochondrion",null,"plastid","nucleus","nucleus","msms:nucleus:23303719","23303719:Qi:Q:He,Lei:L:Chen,Yu:Y:Xu,Weichang:W:Yu:2013","AT2G31320.1"]
["Os07t0469200-02","Rice","Similar to predicted protein. (Os07t0469200-02)","7",69,{"v":7536.5,"d":"7536.500"},{"v":12.0264,"d":"12.026"},{"v":0.473913,"d":"0.474"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","cytosol","extracellular",null,null,"AT1G33055.1"]
["Os07t0510200-01","Rice","Glycoside hydrolase, family 17 protein. (Os07t0510200-01);Glycoside hydrolase, family 17 protein. (Os07t0510200-02);Similar to glucan endo-1,3-beta-glucosidase 3. (Os07t0510200-03)","7",540,{"v":57047.7,"d":"57047.700"},{"v":5.72479,"d":"5.725"},{"v":0.0787037,"d":"0.079"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","vacuole","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT1G11820.2"]
["Os07t0517900-01","Rice","Similar to taxane 10-beta-hydroxylase. (Os07t0517900-01)","7",374,{"v":42268.3,"d":"42268.300"},{"v":9.68332,"d":"9.683"},{"v":-0.0596257,"d":"-0.060"},"endoplasmic reticulum,extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT2G42850.1"]
["Os07t0528200-00","Rice","Conserved hypothetical protein. (Os07t0528200-00)","7",128,{"v":14780.7,"d":"14780.700"},{"v":10.6598,"d":"10.660"},{"v":-0.414062,"d":"-0.414"},"cytosol","mitochondrion,cytosol,plastid","plastid",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT2G05260.2"]
["Os07t0552800-02","Rice","CELLULOSE SYNTHASE LIKE F2Cellulose synthase family protein. (Os07t0552800-01);Similar to Mixed-linked glucan synthase 2. (Os07t0552800-02)","7",748,{"v":82571.7,"d":"82571.700"},{"v":8.05915,"d":"8.059"},{"v":0.0906417,"d":"0.091"},"cytosol,plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"plasma membrane",null,null,"AT1G02730.1"]
["Os07t0558500-02","Rice","NON-YELLOW COLORING4Inositol phosphatase-like protein. (Os07t0558500-01);Similar to Protein THYLAKOID FORMATION1, chloroplastic. (Os07t0558500-02)","7",70,{"v":8220.83,"d":"8220.830"},{"v":9.98148,"d":"9.981"},{"v":-1.03286,"d":"-1.033"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G20890.1"]
["Os07t0565600-01","Rice","CYCLOPHILIN 37Similar to predicted protein. (Os07t0565600-01);Similar to Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Thylakoid lumen PPIase of 38 kDa) (p38). (Os07t0565600-02)","7",465,{"v":49789.9,"d":"49789.900"},{"v":5.56521,"d":"5.565"},{"v":-0.00473118,"d":"-0.005"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT3G15520.1"]
["Os07t0565600-02","Rice","CYCLOPHILIN 37Similar to predicted protein. (Os07t0565600-01);Similar to Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Thylakoid lumen PPIase of 38 kDa) (p38). (Os07t0565600-02)","7",432,{"v":46093.4,"d":"46093.400"},{"v":5.07991,"d":"5.080"},{"v":-0.0481481,"d":"-0.048"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","plastid","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G15520.1"]
["Os07t0571600-00","Rice","Chalcone isomerase domain containing protein. (Os07t0571600-00)","7",263,{"v":28523.5,"d":"28523.500"},{"v":10.0203,"d":"10.020"},{"v":-0.0912548,"d":"-0.091"},"mitochondrion","mitochondrion,plasma membrane,plastid","plastid",null,null,"mitochondrion","plastid","plasma membrane,plastid","mitochondrion","plastid",null,"mitochondrion","mitochondrion","plastid",null,null,"AT3G63170.1"]
["Os07t0601000-01","Rice","Similar to NADPH HC toxin reductase (Fragment). (Os07t0601000-01)","7",338,{"v":36771.7,"d":"36771.700"},{"v":4.81196,"d":"4.812"},{"v":-0.0997041,"d":"-0.100"},"golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","cytosol",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi",null,null,"AT4G27250.1"]
["Os07t0673600-00","Rice","Conserved hypothetical protein. (Os07t0673600-00)","7",195,{"v":20410.9,"d":"20410.900"},{"v":5.07896,"d":"5.079"},{"v":-0.238974,"d":"-0.239"},"cytosol","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","mitochondrion,extracellular,nucleus,cytosol,peroxisome,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT4G22990.1"]
["Os08t0119800-02","Rice","PHOTOSYSTEM II SUBUNITSimilar to Photosystem II core complex proteins psbY, chloroplast precursor (L- arginine metabolising enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)]. (Os08t0119800-01);Similar to Photosystem II core complex proteins psbY, chloroplast precursor (L- arginine metabolising enzyme) (L-AME) [Contains: Photosystem II protein psbY-1 (psbY-A1); Photosystem II protein psbY-2 (psbY-A2)]. (Os08t0119800-02)","8",205,{"v":20439.9,"d":"20439.900"},10.155,{"v":0.55122,"d":"0.551"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","plastid","plastid","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT1G67740.1"]
["Os08t0208200-01","Rice","Peptidase aspartic, catalytic domain containing protein. (Os08t0208200-01)","8",159,{"v":17861.1,"d":"17861.100"},{"v":4.50487,"d":"4.505"},{"v":-0.279245,"d":"-0.279"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT4G04985.1"]
["Os08t0237000-01","Rice","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 17Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5). (Os08t0237000-01)","8",290,{"v":32098.1,"d":"32098.100"},{"v":5.29961,"d":"5.300"},{"v":-0.341034,"d":"-0.341"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:17951457,msms:extracellular:18372294,msms:extracellular:24083427","17951457:Jinming:J:Zhu,Sophie:S:Alvarez,Ellen L:EL:Marsh,Mary E:ME:Lenoble,In-Jeong:IJ:Cho,Mayandi:M:Sivaguru,Sixue:S:Chen,Henry T:HT:Nguyen,Yajun:Y:Wu,Daniel P:DP:Schachtman,Robert E:RE:Sharp:2007,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008","AT4G25810.1"]
["Os08t0332700-01","Rice","Conserved hypothetical protein. (Os08t0332700-01);Hypothetical conserved gene. (Os08t0332700-02);Pentatricopeptide repeat containing protein. (Os08t0332700-03);Hypothetical conserved gene. (Os08t0332700-04)","8",284,{"v":29738.2,"d":"29738.200"},{"v":7.81501,"d":"7.815"},{"v":0.034507,"d":"0.035"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G64430.2"]
["Os08t0332700-02","Rice","Conserved hypothetical protein. (Os08t0332700-01);Hypothetical conserved gene. (Os08t0332700-02);Pentatricopeptide repeat containing protein. (Os08t0332700-03);Hypothetical conserved gene. (Os08t0332700-04)","8",161,{"v":16026.9,"d":"16026.900"},4.616,{"v":0.304969,"d":"0.305"},"plastid","plasma membrane,plastid,nucleus","plastid",null,null,"plastid","plastid","plasma membrane,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G64430.3"]
["Os08t0333100-01","Rice","Conserved hypothetical protein. (Os08t0333100-01)","8",481,{"v":51010.2,"d":"51010.200"},{"v":6.52458,"d":"6.525"},{"v":-0.311227,"d":"-0.311"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus",null,"plastid",null,"mitochondrion","plastid","plastid",null,null,"AT4G12070.1"]
["Os08t0421400-01","Rice","Hypothetical protein. (Os08t0421400-01)","8",127,{"v":13855.6,"d":"13855.600"},12.625,{"v":-0.947244,"d":"-0.947"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","mitochondrion","nucleus","mitochondrion","plastid",null,"plastid","plastid","plastid",null,null,"AT4G23060.1"]
["Os08t0476600-00","Rice","Similar to plant-specific domain TIGR01570 family protein. (Os08t0476600-00)","8",254,{"v":27061.8,"d":"27061.800"},10.694,{"v":-0.268898,"d":"-0.269"},"mitochondrion,peroxisome,plastid","mitochondrion,peroxisome,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","mitochondrion,plastid",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT5G42680.2"]
["Os08t0512500-01","Rice","Similar to Thylakoid lumen protein, chloroplast. (Os08t0512500-01)","8",242,{"v":25897.4,"d":"25897.400"},{"v":7.33938,"d":"7.339"},{"v":-0.0966942,"d":"-0.097"},"extracellular,plastid","extracellular,plastid","plastid",null,null,"plastid","plastid","extracellular","plastid","plastid",null,"plastid","plastid","plastid","msms:extracellular:28232208","28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT1G76450.1"]
["Os08t0532200-01","Rice","\"Glutamate-1-semialdehyde 2, 1-aminomutase\", Glutamate-1-semialdehyde aminotransferaseSimilar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA- AT). (Os08t0532200-01);Similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic. (Os08t0532200-02);Similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA- AT). (Os08t0532200-03)","8",478,{"v":50240.4,"d":"50240.400"},{"v":6.95266,"d":"6.953"},{"v":0.0257322,"d":"0.026"},"plastid","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","cytosol,plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:nucleus:19621931,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT3G48730.1"]
["Os08t0536300-01","Rice","B-box-containing protein 26, CCT domain-containing gene 30, CCT (CO, CO-LIKE and TOC1) domain protein 30, CCT domain protein 30Similar to Hd1. (Os08t0536300-01)","8",488,{"v":51866.5,"d":"51866.500"},{"v":6.63001,"d":"6.630"},{"v":-0.546926,"d":"-0.547"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT2G33500.2"]
["Os09t0116600-01","Rice","Hypothetical gene. (Os09t0116600-01)","9",83,{"v":8643.22,"d":"8643.220"},10.033,{"v":-0.283133,"d":"-0.283"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT3G09630.1"]
["Os09t0316000-01","Rice","Similar to cupin, RmlC-type. (Os09t0316000-01)","9",240,{"v":26794.3,"d":"26794.300"},{"v":8.72969,"d":"8.730"},{"v":-0.199583,"d":"-0.200"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plasma membrane",null,"cytosol","plastid",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","cytosol",null,null,"AT3G58670.2"]
["Os09t0413200-01","Rice","Similar to CAAX amino terminal protease family protein. (Os09t0413200-01)","9",126,{"v":14005,"d":"14005.000"},{"v":11.9669,"d":"11.967"},{"v":-0.296032,"d":"-0.296"},"plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G14270.1"]
["Os09t0451000-01","Rice","AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 2ACC oxidase, Ethylene biosynthesis (Os09t0451000-01)","9",322,{"v":36338.6,"d":"36338.600"},{"v":4.98477,"d":"4.985"},{"v":-0.315217,"d":"-0.315"},"cytosol","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","cytosol",null,"peroxisome",null,"peroxisome","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G05010.1"]
["Os09t0481200-01","Rice","PHOTOSYSTEM I SUBUNITSimilar to photosystem I reaction center subunit V. (Os09t0481200-01)","9",163,{"v":17787.3,"d":"17787.300"},{"v":11.5697,"d":"11.570"},{"v":-0.122086,"d":"-0.122"},"plastid","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","plastid","plastid",null,"mitochondrion",null,"plastid",null,"plastid","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G55670.1"]
["Os09t0532900-01","Rice","myb transcription factor 42/85, transcription factor MYB42/85Similar to Myb13 protein. (Os09t0532900-01);Hypothetical conserved gene. (Os09t0532900-02);Myb transcription factor domain containing protein. (Os09t0532900-04)","9",179,{"v":20016.1,"d":"20016.100"},{"v":10.0681,"d":"10.068"},{"v":-0.715084,"d":"-0.715"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G12350.1"]
["Os09t0535000-02","Rice","Similar to Triosephosphate isomerase. (Os09t0535000-01);Similar to Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase). (Os09t0535000-02);Similar to Triosephosphate isomerase. (Os09t0535000-03)","9",304,{"v":32394.7,"d":"32394.700"},{"v":7.42374,"d":"7.424"},{"v":0.00427632,"d":"0.004"},"extracellular","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","plastid","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion","msms:plastid:17189339,msms:extracellular:18986194,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017,18986194:Young-Ho:YH:Jung,Seung-Hee:SH:Jeong,So Hee:SH:Kim,Raksha:R:Singh,Jae-Eun:JE:Lee,Yoon-Seong:YS:Cho,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Nam-Soo:NS:Jwa:2008","AT2G21170.1"]
["Os09t0563700-01","Rice","Kelch related domain containing protein. (Os09t0563700-01)","9",710,{"v":80076.9,"d":"80076.900"},{"v":5.90154,"d":"5.902"},{"v":-0.686761,"d":"-0.687"},"plastid","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G35140.3"]
["Os10t0130800-01","Rice","Conserved hypothetical protein. (Os10t0130800-01)","10",138,{"v":16229.9,"d":"16229.900"},{"v":10.1862,"d":"10.186"},{"v":-0.484783,"d":"-0.485"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus","plastid","mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT3G14470.1"]
["Os10t0183500-02","Rice","Conserved hypothetical protein. (Os10t0183500-01);Hypothetical protein. (Os10t0183500-02)","10",142,{"v":14866,"d":"14866.000"},{"v":12.6,"d":"12.600"},{"v":-0.176761,"d":"-0.177"},"plastid","peroxisome,plastid,nucleus","nucleus",null,null,"plastid","peroxisome","nucleus",null,"plastid","peroxisome","plastid",null,"plastid",null,null,"AT2G40270.1"]
["Os10t0214132-00","Rice","Similar to ribosomal protein L2. (Os10t0214132-00)","10",88,{"v":10247.3,"d":"10247.300"},11.031,{"v":-0.977273,"d":"-0.977"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"plastid",null,"cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"ATCG00830.1"]
["Os10t0418900-01","Rice","Hypothetical conserved gene. (Os10t0418900-01)","10",61,{"v":6274.71,"d":"6274.710"},{"v":5.5626,"d":"5.563"},{"v":0.537705,"d":"0.538"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G69828.1"]
["Os10t0430200-03","Rice","CINNAMYL ALCOHOL DEHYDROGENASE 3Similar to Sinapyl alcohol dehydrogenase. (Os10t0430200-01);Similar to Sinapyl alcohol dehydrogenase. (Os10t0430200-02);Similar to Sinapyl alcohol dehydrogenase. (Os10t0430200-03)","10",366,{"v":38525.3,"d":"38525.300"},{"v":6.31485,"d":"6.315"},{"v":0.0803279,"d":"0.080"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G37970.1"]
["Os10t0437600-00","Rice","SOLUBLE STARCH SYNTHASE IICSimilar to Starch synthase II, chloroplast precursor (EC 2.4.1.21) (SS II) (GBSSII) (Granule-bound starch synthase II). (Os10t0437600-00)","10",749,{"v":83316.9,"d":"83316.900"},{"v":5.9616,"d":"5.962"},{"v":-0.287183,"d":"-0.287"},"plastid","cytosol,plastid","plastid",null,"plastid","plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G01180.1"]
["Os10t0498300-01","Rice","Similar to Epoxide hydrolase. (Os10t0498300-01)","10",332,{"v":36978.2,"d":"36978.200"},{"v":5.10186,"d":"5.102"},{"v":-0.185542,"d":"-0.186"},"cytosol,peroxisome,plastid","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT2G26740.1"]
["Os10t0501900-01","Rice","Tetratricopeptide-like helical domain containing protein. (Os10t0501900-01)","10",363,{"v":38419.5,"d":"38419.500"},{"v":4.42921,"d":"4.429"},{"v":-0.123691,"d":"-0.124"},"plastid","mitochondrion,cytosol,plasma membrane,plastid","plastid",null,null,"plastid","cytosol","cytosol,plasma membrane",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT2G29670.2"]
["Os10t0506900-01","Rice","Hypothetical conserved gene. (Os10t0506900-01);Conserved hypothetical protein. (Os10t0506900-02);Conserved hypothetical protein. (Os10t0506900-03)","10",164,{"v":18523.5,"d":"18523.500"},{"v":8.23296,"d":"8.233"},{"v":-0.217683,"d":"-0.218"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G46871.1"]
["Os10t0506900-02","Rice","Hypothetical conserved gene. (Os10t0506900-01);Conserved hypothetical protein. (Os10t0506900-02);Conserved hypothetical protein. (Os10t0506900-03)","10",168,{"v":18842,"d":"18842.000"},{"v":7.91048,"d":"7.910"},{"v":-3.57143E-3,"d":"-0.004"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","cytosol",null,null,"AT5G46871.1"]
["Os10t0548000-02","Rice","Hypothetical conserved gene. (Os10t0548000-01);Similar to Short-chain dehydrogenase Tic32. (Os10t0548000-02)","10",319,{"v":34172,"d":"34172.000"},{"v":8.49346,"d":"8.493"},{"v":0.13511,"d":"0.135"},"cytosol,peroxisome,plastid","cytosol,peroxisome,plastid,nucleus","nucleus",{"$nulls":3},"peroxisome","plastid",null,"peroxisome","peroxisome",null,"plastid","cytosol",null,null,"AT4G23430.2"]
["Os10t0567400-01","Rice","chlorophyll a oxygenase, Chlorophyll a oxygenase 1, Lls1-homologue of maize, \"3, 8-divinyl chlorophyllide a 8-vinyl reductase\"Similar to Rieske. (Os10t0567400-01);Similar to Isoform 2 of Chlorophyllide a oxygenase, chloroplastic. (Os10t0567400-02);Similar to Isoform 2 of Chlorophyllide a oxygenase, chloroplastic. (Os10t0567400-03)","10",541,{"v":60858.4,"d":"60858.400"},{"v":8.21756,"d":"8.218"},{"v":-0.268207,"d":"-0.268"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G44446.1"]
["Os10t0576600-01","Rice","Tetratricopeptide-like helical domain containing protein. (Os10t0576600-01);Hypothetical conserved gene. (Os10t0576600-02)","10",227,{"v":24807.7,"d":"24807.700"},{"v":4.38107,"d":"4.381"},{"v":-0.623348,"d":"-0.623"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus","plastid","mitochondrion",null,"plastid","plastid","nucleus",null,null,"AT4G17940.1"]
["Os10t0577500-02","Rice","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 25Concanavalin A-like lectin/glucanase, subgroup domain containing protein. (Os10t0577500-01);Hypothetical conserved gene. (Os10t0577500-02)","10",194,{"v":22762.2,"d":"22762.200"},{"v":13.0452,"d":"13.045"},{"v":-0.835052,"d":"-0.835"},"cytosol","mitochondrion,cytosol,extracellular,nucleus","nucleus",{"$nulls":3},"cytosol","extracellular,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G18990.1"]
["Os11t0131900-01","Rice","Arabinofuranosidase 3Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II. (Os11t0131900-01);Similar to alpha-N-arabinofuranosidase A. (Os11t0131900-02)","11",658,{"v":72504.2,"d":"72504.200"},{"v":4.8687,"d":"4.869"},{"v":-0.148176,"d":"-0.148"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","msms:extracellular:24083427,msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT3G10740.3"]
["Os11t0157200-03","Rice","Harpin-induced 1 domain containing protein. (Os11t0157200-03)","11",210,{"v":23039.7,"d":"23039.700"},{"v":7.95689,"d":"7.957"},{"v":0.15,"d":"0.150"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"endoplasmic reticulum","plasma membrane","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G44220.1"]
["Os11t0167800-01","Rice","ABSCISIC ACID-STRESS-RIPENING-INDUCIBLE 5 PROTEINSimilar to Anth (Pollen-specific desiccation-associated LLA23 protein). (Os11t0167800-01)","11",138,{"v":15465.6,"d":"15465.600"},{"v":6.70102,"d":"6.701"},{"v":-1.24348,"d":"-1.243"},"plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus","msms:nucleus:15276429,msms:plastid:17189339,msms:nucleus:19621931,msms:plastid:21433289,gfp:cytosol:22676236,gfp:nucleus:22676236,gfp:plastid:22676236,gfp:plastid:22902685,msms:plasma membrane:27800704","22676236:Rafael Augusto:RA:Arenhart,Julio César de:JC:Lima,Marcelo:M:Pedron,Fabricio E L:FE:Carvalho,Joaquim Albenisio Gomes da:JA:Silveira,Silvia Barcelos:SB:Rosa,Andreia:A:Caverzan,Claudia M B:CM:Andrade,Mariana:M:Schünemann,Rogério:R:Margis,Márcia:M:Margis-Pinheiro:2013,22902685:Rafael Augusto:RA:Arenhart,Rogério:R:Margis,Marcia:M:Margis-Pinheiro:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15276429:Md Monowar Karim:MM:Khan,Setsuko:S:Komatsu:2004,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G64010.1"]
["Os11t0269100-00","Rice","Similar to 50S ribosomal protein L16, chloroplastic. (Os11t0269100-00)","11",137,{"v":15620.2,"d":"15620.200"},{"v":11.4066,"d":"11.407"},{"v":-0.563504,"d":"-0.564"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid","plastid",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"mitochondrion",null,null,"ATCG00790.1"]
["Os11t0461000-01","Rice","SERINE CARBOXYPEPTIDASE 61Peptidase S10, serine carboxypeptidase family protein. (Os11t0461000-01);Hypothetical conserved gene. (Os11t0461000-02);Peptidase S10, serine carboxypeptidase family protein. (Os11t0461000-03)","11",491,{"v":54757.1,"d":"54757.100"},{"v":6.37317,"d":"6.373"},{"v":-0.182485,"d":"-0.182"},"mitochondrion","mitochondrion,vacuole,golgi,peroxisome,plastid","plastid",null,"peroxisome","mitochondrion","vacuole","vacuole",null,"mitochondrion",null,"mitochondrion","mitochondrion","golgi",null,null,"AT3G10450.1"]
["Os11t0466966-01","Rice","Similar to OSIGBa0102N07.4 protein. (Os11t0466966-01);Hypothetical gene. (Os11t0466966-02)","11",59,{"v":6759.29,"d":"6759.290"},{"v":12.9275,"d":"12.928"},{"v":-0.255932,"d":"-0.256"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT4G39390.3"]
["Os11t0525600-03","Rice","Similar to Alpha-mannosidase. (Os11t0525600-01);Similar to Alpha-mannosidase. (Os11t0525600-02);Similar to predicted protein. (Os11t0525600-03);Similar to predicted protein. (Os11t0525600-04);Similar to predicted protein. (Os11t0525600-05)","11",904,{"v":101447,"d":"101447.000"},{"v":6.17065,"d":"6.171"},{"v":-0.36958,"d":"-0.370"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,cytosol,vacuole,plastid","nucleus",{"$nulls":3},"nucleus","extracellular,nucleus,cytosol,vacuole,plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G13980.1"]
["Os11t0528500-01","Rice","Similar to Rubredoxin 1 (Rd-1). (Os11t0528500-01)","11",151,{"v":16310.9,"d":"16310.900"},{"v":10.5271,"d":"10.527"},{"v":-0.121854,"d":"-0.122"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","mitochondrion","mitochondrion","plasma membrane,plastid,nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion","msms:nucleus:19621931,msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT5G51010.1"]
["Os11t0610900-02","Rice","Similar to Seryl-tRNA synthetase (EC 6.1.1.11) (Fragment). (Os11t0610900-01);Hypothetical conserved gene. (Os11t0610900-02)","11",286,{"v":31299.3,"d":"31299.300"},{"v":6.80292,"d":"6.803"},{"v":-0.266783,"d":"-0.267"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","plastid",null,"plastid","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G11870.3"]
["Os11t0649300-01","Rice","Hypothetical conserved gene. (Os11t0649300-01)","11",431,{"v":48223.8,"d":"48223.800"},{"v":4.87336,"d":"4.873"},{"v":-0.747796,"d":"-0.748"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G67220.1"]
["Os11t0652100-01","Rice","NB-ARC domain containing protein. (Os11t0652100-01)","11",{"v":1343,"d":"1,343"},{"v":151547,"d":"151547.000"},{"v":7.08473,"d":"7.085"},{"v":-0.374832,"d":"-0.375"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G46730.1"]
["Os12t0102600-01","Rice","Similar to HCF152. (Os12t0102600-01)","12",697,{"v":76729.2,"d":"76729.200"},{"v":9.19324,"d":"9.193"},{"v":-0.178192,"d":"-0.178"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT3G09650.1"]
["Os12t0113600-01","Rice","Hypothetical protein. (Os12t0113600-01)","12",105,{"v":12062.5,"d":"12062.500"},{"v":11.2673,"d":"11.267"},{"v":-0.475238,"d":"-0.475"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"mitochondrion","nucleus","plastid","mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT3G06435.1"]
["Os12t0169100-01","Rice","Protein of unknown function DUF869, plant family protein. (Os12t0169100-01);Hypothetical conserved gene. (Os12t0169100-02)","12",{"v":1056,"d":"1,056"},{"v":118820,"d":"118820.000"},{"v":4.67676,"d":"4.677"},{"v":-0.663352,"d":"-0.663"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT3G05270.1"]
["Os12t0263000-01","Rice","Similar to Glutathione synthase. (Os12t0263000-01)","12",274,{"v":30698.8,"d":"30698.800"},{"v":5.41535,"d":"5.415"},{"v":-0.239781,"d":"-0.240"},"cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G27380.1"]
["Os12t0277500-02","Rice","chaperonin 60 alpha subunit 1Plastid chaperonin 60 alpha subunit, Folding of Rubisco large subunit (rbcL), Seedling development (Os12t0277500-01);Similar to RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment). (Os12t0277500-02);Similar to RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment). (Os12t0277500-03);Similar to RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment). (Os12t0277500-04)","12",449,{"v":47707.4,"d":"47707.400"},{"v":4.56676,"d":"4.567"},{"v":0.0180401,"d":"0.018"},"plastid","mitochondrion,cytosol,plastid","cytosol",null,"plastid","mitochondrion","cytosol","mitochondrion",null,"mitochondrion",{"$nulls":3},"mitochondrion","gfp:plastid:23620301","23620301:Sung-Ryul:SR:Kim,Jung-Il:JI:Yang,Gynheung:G:An:2013","AT2G28000.1"]
["Os12t0289600-01","Rice","Conserved hypothetical protein. (Os12t0289600-01)","12",322,{"v":36786,"d":"36786.000"},{"v":8.79772,"d":"8.798"},{"v":-0.869565,"d":"-0.870"},"nucleus","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus","msms:nucleus:18203134","18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008","AT4G24790.1"]
["Os12t0428700-01","Rice","endosperm-specific gene 149Hypothetical protein. (Os12t0428700-01)","12",116,{"v":12578.1,"d":"12578.100"},{"v":10.5024,"d":"10.502"},{"v":-0.642241,"d":"-0.642"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"mitochondrion",null,null,"AT4G28800.1"]
["Os12t0459300-01","Rice","Nucleic acid-binding, OB-fold domain containing protein. (Os12t0459300-01);Hypothetical gene. (Os12t0459300-02);Nucleic acid-binding, OB-fold domain containing protein. (Os12t0459300-03)","12",116,{"v":13221.9,"d":"13221.900"},{"v":7.43495,"d":"7.435"},{"v":-0.372414,"d":"-0.372"},"cytosol","mitochondrion,nucleus,cytosol,golgi,plastid","plastid",{"$nulls":3},"cytosol","nucleus,plastid,golgi",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G18830.1"]
["Os12t0480100-01","Rice","Similar to One helix protein (OHP). (Os12t0480100-01)","12",113,{"v":12301.4,"d":"12301.400"},{"v":11.2146,"d":"11.215"},{"v":0.318584,"d":"0.319"},"plastid","mitochondrion,nucleus,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"nucleus","plastid","cytosol","mitochondrion,plasma membrane,plastid,golgi",null,"plastid",null,"plastid","plastid","vacuole",null,null,"AT5G02120.1"]
["Os12t0488300-00","Rice","Similar to ribosomal protein L22. (Os12t0488300-00)","12",147,{"v":17351.8,"d":"17351.800"},{"v":10.9701,"d":"10.970"},{"v":-0.280272,"d":"-0.280"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"plastid",null,"cytosol","plastid","mitochondrion","mitochondrion",null,null,"plastid","mitochondrion",null,null,"ATCG00810.1"]
["Os12t0538800-01","Rice","Kelch-type beta propeller domain containing protein. (Os12t0538800-01)","12",698,{"v":77331.6,"d":"77331.600"},{"v":8.92696,"d":"8.927"},{"v":-0.538252,"d":"-0.538"},"mitochondrion,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT5G18590.1"]
["Os01t0100400-01","Rice","Similar to Pectinesterase-like protein. (Os01t0100400-01)","1",593,{"v":65866.9,"d":"65866.900"},{"v":5.60818,"d":"5.608"},{"v":-0.174199,"d":"-0.174"},"plasma membrane,extracellular,vacuole","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","vacuole","plasma membrane",null,null,"AT5G48450.1"]
["Os01t0130400-01","Rice","Similar to Alpha-xylosidase precursor (Fragment). (Os01t0130400-01)","1",932,{"v":102973,"d":"102973.000"},{"v":6.51024,"d":"6.510"},{"v":-0.107189,"d":"-0.107"},"extracellular","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane,plastid","plastid",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:19038476,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G68560.1"]
["Os01t0141600-01","Rice","ROOT UV-B SENSITIVE 5Protein of unknown function DUF647 family protein. (Os01t0141600-01)","1",323,{"v":35192.2,"d":"35192.200"},{"v":9.28057,"d":"9.281"},{"v":-0.077709,"d":"-0.078"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT5G01510.1"]
["Os01t0206700-01","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-01);Similar to cDNA clone:J013031K24, full insert sequence. (Os01t0206700-02);Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-03)","1",461,{"v":51968.7,"d":"51968.700"},{"v":9.74729,"d":"9.747"},{"v":-0.401735,"d":"-0.402"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"plastid",null,"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","cytosol",null,null,"AT5G45820.1"]
["Os01t0206700-02","Rice","CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-01);Similar to cDNA clone:J013031K24, full insert sequence. (Os01t0206700-02);Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-03)","1",285,{"v":31958.1,"d":"31958.100"},{"v":9.02928,"d":"9.029"},{"v":-0.452982,"d":"-0.453"},"cytosol,plasma membrane","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,"cytosol",null,"plasma membrane","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G18700.1"]
["Os01t0221900-01","Rice","Similar to peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase. (Os01t0221900-01)","1",110,{"v":11467.7,"d":"11467.700"},{"v":8.0469,"d":"8.047"},{"v":-0.144545,"d":"-0.145"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","mitochondrion,extracellular,nucleus,plasma membrane,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G20650.3"]
["Os01t0243300-01","Rice","Hypothetical protein. (Os01t0243300-01)","1",77,{"v":8562.76,"d":"8562.760"},{"v":12.3642,"d":"12.364"},{"v":-1.87662,"d":"-1.877"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G67650.1"]
["Os01t0256800-01","Rice","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 4Similar to zinc finger helicase family protein. (Os01t0256800-01);Hypothetical conserved gene. (Os01t0256800-02)","1",{"v":1007,"d":"1,007"},{"v":113234,"d":"113234.000"},{"v":7.07529,"d":"7.075"},{"v":-0.128004,"d":"-0.128"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G47680.1"]
["Os01t0266600-02","Rice","PRXIIFThioredoxin fold domain containing protein. (Os01t0266600-01);Thioredoxin fold domain containing protein. (Os01t0266600-02)","1",198,{"v":20874.7,"d":"20874.700"},{"v":8.22087,"d":"8.221"},{"v":0.0131313,"d":"0.013"},"mitochondrion","mitochondrion,plastid","plastid",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:12746528,msms:mitochondrion:15276442,msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:28232208","15276442:Brian K:BK:Kristensen,Per:P:Askerlund,Natalia V:NV:Bykova,Helge:H:Egsgaard,Ian M:IM:Møller:2004,23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,12746528:Joshua L:JL:Heazlewood,Katharine A:KA:Howell,James:J:Whelan,A Harvey:AH:Millar:2003,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G06050.1"]
["Os01t0279800-01","Rice","Similar to LRR protein. (Os01t0279800-01);Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os01t0279800-02)","1",214,{"v":23067.5,"d":"23067.500"},{"v":5.58078,"d":"5.581"},{"v":-0.0808411,"d":"-0.081"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT5G21090.1"]
["Os01t0293800-00","Rice","Hypothetical protein. (Os01t0293800-00)","1",148,{"v":15991.6,"d":"15991.600"},{"v":12.9777,"d":"12.978"},{"v":-0.590541,"d":"-0.591"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G51055.1"]
["Os01t0350000-01","Rice","Transferase family protein. (Os01t0350000-01)","1",455,{"v":48610.6,"d":"48610.600"},{"v":6.42367,"d":"6.424"},{"v":0.163736,"d":"0.164"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G03480.1"]
["Os01t0361500-01","Rice","Phospholipid/glycerol acyltransferase domain containing protein. (Os01t0361500-01)","1",682,{"v":76436.8,"d":"76436.800"},{"v":7.00127,"d":"7.001"},{"v":-0.170528,"d":"-0.171"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","nucleus","plastid","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT1G54570.1"]
["Os01t0500400-01","Rice","Conserved hypothetical protein. (Os01t0500400-01)","1",129,{"v":14516.7,"d":"14516.700"},{"v":12.0309,"d":"12.031"},{"v":-0.455814,"d":"-0.456"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT3G14630.2"]
["Os01t0578000-02","Rice","DNA REPAIR PROTEIN RAD51CDNA repair protein, DNA double-strand break repair, synaptonemal complex assembly (Os01t0578000-01);Splicing variant of DNA repair protein RAD51C (Os01t0578000-02);Splicing variant of DNA repair protein RAD51C (Os01t0578000-03)","1",309,{"v":34422.9,"d":"34422.900"},{"v":9.08374,"d":"9.084"},{"v":0.00938511,"d":"0.009"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion",null,null,"mitochondrion",null,"mitochondrion","mitochondrion","nucleus",null,null,"AT2G45280.1"]
["Os01t0580000-02","Rice","Esterase/lipase/thioesterase domain containing protein. (Os01t0580000-01);Similar to esterase. (Os01t0580000-02)","1",140,{"v":14665,"d":"14665.000"},{"v":11.5502,"d":"11.550"},{"v":-0.0514286,"d":"-0.051"},"plastid","cytosol,endoplasmic reticulum,plastid,nucleus","nucleus",null,"endoplasmic reticulum","plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G29840.1"]
["Os01t0613900-02","Rice","Hypothetical conserved gene. (Os01t0613900-01);Similar to predicted protein. (Os01t0613900-02);LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 domain containing protein. (Os01t0613900-03)","1",409,{"v":44224.1,"d":"44224.100"},{"v":7.67362,"d":"7.674"},{"v":0.0540342,"d":"0.054"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"plastid",null,"plastid",null,"plastid",null,null,"AT2G34090.4"]
["Os01t0636500-01","Rice","Similar to Polygalacturonase PG2. (Os01t0636500-01)","1",538,{"v":57671.2,"d":"57671.200"},{"v":8.15018,"d":"8.150"},{"v":-0.301115,"d":"-0.301"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT1G60590.1"]
["Os01t0686100-02","Rice","Hypothetical conserved gene. (Os01t0686100-01);Hypothetical conserved gene. (Os01t0686100-02)","1",66,{"v":7143.48,"d":"7143.480"},{"v":4.43983,"d":"4.440"},{"v":0.463636,"d":"0.464"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT1G04950.1"]
["Os01t0712600-00","Rice","Similar to methyltransferase. (Os01t0712600-00)","1",247,{"v":27846.8,"d":"27846.800"},{"v":4.74673,"d":"4.747"},{"v":-0.323482,"d":"-0.323"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid","plastid","mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT4G29590.1"]
["Os01t0719200-01","Rice","Conserved hypothetical protein. (Os01t0719200-01)","1",86,{"v":9791.5,"d":"9791.500"},{"v":10.6137,"d":"10.614"},{"v":-1.03488,"d":"-1.035"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",{"$nulls":3},"mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT1G51790.2"]
["Os01t0723400-03","Rice","NADP-MALIC ENZYME 2NADP-malic enzyme, Splicing variant (Os01t0723400-01);Similar to Malic enzyme. (Os01t0723400-02);NADP-malic enzyme, Salt and osmotic stress tolerance, Disease resistance (Os01t0723400-03);NADP-malic enzyme, Splicing variant (Os01t0723400-04);NADP-malic enzyme, Splicing variant (Os01t0723400-05)","1",593,{"v":65400.4,"d":"65400.400"},{"v":6.01169,"d":"6.012"},{"v":-0.173693,"d":"-0.174"},"plastid","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"plastid","cytosol","msms:plastid:15069638,msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,15069638:N:N:Tanaka,M:M:Fujita,H:H:Handa,S:S:Murayama,M:M:Uemura,Y:Y:Kawamura,T:T:Mitsui,S:S:Mikami,Y:Y:Tozawa,T:T:Yoshinaga,S:S:Komatsu:2004","AT1G79750.1"]
["Os01t0753500-01","Rice","AUXIN RESPONSE FACTOR 3Transcriptional factor B3 family protein. (Os01t0753500-01)","1",731,{"v":79587.9,"d":"79587.900"},{"v":7.94214,"d":"7.942"},{"v":-0.445964,"d":"-0.446"},"plastid","plastid,nucleus","plastid",null,"nucleus","plastid","nucleus","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G33860.1"]
["Os01t0757800-03","Rice","DNA polymerase etaDNA polymerase eta domain containing protein. (Os01t0757800-01);Hypothetical conserved gene. (Os01t0757800-02);Hypothetical conserved gene. (Os01t0757800-03)","1",607,{"v":66964.7,"d":"66964.700"},{"v":8.40369,"d":"8.404"},{"v":-0.486656,"d":"-0.487"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT5G44740.2"]
["Os01t0782200-01","Rice","Diacylglycerol kinase, catalytic region domain containing protein. (Os01t0782200-01);Similar to D-erythro-sphingosine kinase/ diacylglycerol kinase. (Os01t0782200-02)","1",507,{"v":54755.9,"d":"54755.900"},{"v":8.54919,"d":"8.549"},{"v":-0.1357,"d":"-0.136"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G21534.2"]
["Os01t0805200-01","Rice","Protein of unknown function DUF3007 domain containing protein. (Os01t0805200-01);Protein of unknown function DUF3007 domain containing protein. (Os01t0805200-02)","1",209,{"v":22860.6,"d":"22860.600"},{"v":9.63944,"d":"9.639"},{"v":-0.154545,"d":"-0.155"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","plastid","mitochondrion,plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT3G17930.1"]
["Os01t0836400-01","Rice","Hypothetical conserved gene. (Os01t0836400-01);SAC3/GANP family protein. (Os01t0836400-02)","1",97,{"v":10393.4,"d":"10393.400"},{"v":12.6792,"d":"12.679"},{"v":-0.592784,"d":"-0.593"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion","nucleus","mitochondrion",null,null,"AT1G14040.1"]
["Os01t0836400-02","Rice","Hypothetical conserved gene. (Os01t0836400-01);SAC3/GANP family protein. (Os01t0836400-02)","1",914,{"v":99811.8,"d":"99811.800"},{"v":8.73153,"d":"8.732"},{"v":-0.762691,"d":"-0.763"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G39340.1"]
["Os01t0852200-01","Rice","PHT4;3Similar to sialin. (Os01t0852200-01);Similar to sialin. (Os01t0852200-02);Major facilitator superfamily protein. (Os01t0852200-03)","1",427,{"v":46405.8,"d":"46405.800"},{"v":10.8488,"d":"10.849"},{"v":0.39719,"d":"0.397"},"mitochondrion","mitochondrion,plasma membrane,plastid,golgi","plastid",null,null,"mitochondrion","golgi","plasma membrane",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT3G46980.4"]
["Os01t0896500-01","Rice","SULFURTRANSFERASE 10Rhodanese-like domain containing protein. (Os01t0896500-01);Similar to predicted protein. (Os01t0896500-02)","1",623,{"v":65050.8,"d":"65050.800"},4.765,{"v":0.0874799,"d":"0.087"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","extracellular","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid",null,"plastid","plastid","endoplasmic reticulum","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G59780.1"]
["Os01t0904200-02","Rice","Protein kinase, core domain containing protein. (Os01t0904200-01);Similar to protein kinase. (Os01t0904200-02)","1",238,{"v":27356.6,"d":"27356.600"},{"v":7.14202,"d":"7.142"},{"v":-0.183193,"d":"-0.183"},"cytosol","mitochondrion,cytosol,plastid","plastid",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G24810.2"]
["Os01t0917400-03","Rice","ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12CCCH-type zinc finger protein, Resistance against bacterial blight disease (Os01t0917400-01);Zinc finger, CCCH-type domain containing protein. (Os01t0917400-02);Hypothetical conserved gene. (Os01t0917400-03)","1",238,{"v":25976.8,"d":"25976.800"},{"v":9.1274,"d":"9.127"},{"v":-0.456723,"d":"-0.457"},"plasma membrane,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid","gfp:nucleus:22158700,msms:plasma membrane:27800704","22158700:Hanqing:H:Deng,Hongbo:H:Liu,Xianghua:X:Li,Jinghua:J:Xiao,Shiping:S:Wang:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G02830.1"]
["Os01t0970600-01","Rice","RNA helicase 58Similar to ATP binding protein. (Os01t0970600-01)","1",474,{"v":52117.4,"d":"52117.400"},{"v":9.80569,"d":"9.806"},{"v":-0.0432489,"d":"-0.043"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT5G19210.2"]
["Os01t0978100-03","Rice","Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-01);Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-02);Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-03)","1",394,{"v":41790.5,"d":"41790.500"},{"v":6.67363,"d":"6.674"},{"v":0.00685279,"d":"0.007"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:nucleus:19621931,msms:plastid:21433289,msms:extracellular:23159799,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT3G59760.1"]
["Os02t0114200-02","Rice","TYPE III CARBOXYPEPTIDASESerine carboxypeptidase III precursor (EC 3.4.16.5). (Os02t0114200-01);Similar to Serine carboxypeptidase 3. (Os02t0114200-02)","2",127,{"v":14372.3,"d":"14372.300"},{"v":4.8945,"d":"4.895"},{"v":-0.17874,"d":"-0.179"},"cytosol","mitochondrion,cytosol,peroxisome,vacuole","cytosol",null,"vacuole",null,"cytosol","peroxisome,vacuole",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT5G22980.1"]
["Os02t0128200-01","Rice","b-ZIP TRANSCRIPTION FACTOR 13Similar to Transcription factor HBP-1a (Histone-specific transcription factor HBP1). (Os02t0128200-01);Similar to Transcription factor HBP-1a (Histone-specific transcription factor HBP1). (Os02t0128200-02)","2",347,{"v":37081.3,"d":"37081.300"},{"v":5.57172,"d":"5.572"},{"v":-0.964841,"d":"-0.965"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G35530.1"]
["Os02t0128800-03","Rice","RING finger protein OsRFPHC-9, RING-HC protein 9TRAF-type domain containing protein. (Os02t0128800-01);TRAF-type domain containing protein. (Os02t0128800-02);Similar to SINA2. (Os02t0128800-03)","2",229,{"v":26465,"d":"26465.000"},8.217,{"v":-0.341485,"d":"-0.341"},"cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"nucleus","mitochondrion,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G41980.1"]
["Os02t0158800-01","Rice","Protein of unknown function DUF246, plant family protein. (Os02t0158800-01)","2",573,{"v":64251.3,"d":"64251.300"},{"v":9.65867,"d":"9.659"},{"v":-0.389005,"d":"-0.389"},"plastid","mitochondrion,peroxisome,plastid,golgi","plastid",{"$nulls":3},"plastid","golgi","plastid","plastid",null,"plastid","mitochondrion","peroxisome",null,null,"AT3G26370.1"]
["Os02t0187600-01","Rice","Similar to Tic21. (Os02t0187600-01);Similar to Tic21. (Os02t0187600-02)","2",272,{"v":27993.1,"d":"27993.100"},{"v":11.3872,"d":"11.387"},{"v":0.392647,"d":"0.393"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid","plasma membrane,nucleus","plastid","plastid",null,"plastid","plastid","plasma membrane",null,null,"AT2G15290.1"]
["Os02t0212900-00","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 66Similar to Protein kinase domain containing protein, expressed. (Os02t0212900-00)","2",124,{"v":14045,"d":"14045.000"},{"v":4.79165,"d":"4.792"},{"v":0.0758065,"d":"0.076"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,"cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT1G61460.1"]
["Os02t0273100-01","Rice","Aminotransferase, class IV family protein. (Os02t0273100-01);Aminotransferase, class IV family protein. (Os02t0273100-02)","2",389,{"v":41560.1,"d":"41560.100"},{"v":7.5,"d":"7.500"},{"v":0.0465296,"d":"0.047"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G57850.1"]
["Os02t0318600-00","Rice","PLEIOTROPIC DRUG RESISTANCE 4Similar to PDR-like ABC transporter. (Os02t0318600-00)","2",148,{"v":16852.6,"d":"16852.600"},{"v":5.61928,"d":"5.619"},{"v":-0.772973,"d":"-0.773"},"plasma membrane","mitochondrion,extracellular,nucleus,cytosol,golgi,plastid","plastid",null,"extracellular","mitochondrion","cytosol","nucleus,golgi","mitochondrion","mitochondrion",null,"plastid","plastid","nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G36380.1"]
["Os02t0464700-01","Rice","Hypothetical protein. (Os02t0464700-01)","2",86,{"v":9490.11,"d":"9490.110"},{"v":4.5469,"d":"4.547"},{"v":-0.469767,"d":"-0.470"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT1G48470.1"]
["Os02t0507400-01","Rice","Protein of unknown function DUF493 family protein. (Os02t0507400-01);Protein of unknown function DUF493 family protein. (Os02t0507400-02);Similar to OSIGBa0148P16.4 protein. (Os02t0507400-03)","2",186,{"v":19847.1,"d":"19847.100"},{"v":9.84208,"d":"9.842"},{"v":-0.0715054,"d":"-0.072"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G27385.1"]
["Os02t0513800-01","Rice","Ovarian tumour, otubain domain containing protein. (Os02t0513800-01)","2",760,{"v":87457.9,"d":"87457.900"},{"v":9.18432,"d":"9.184"},{"v":-0.598816,"d":"-0.599"},"nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","plastid",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT1G28120.1"]
["Os02t0562700-02","Rice","Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61). (Os02t0562700-01);Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61). (Os02t0562700-02)","2",293,{"v":30498.3,"d":"30498.300"},{"v":6.53807,"d":"6.538"},{"v":0.198294,"d":"0.198"},"peroxisome,extracellular,plastid","mitochondrion,extracellular,cytosol,peroxisome,plastid","cytosol",null,null,"plastid","peroxisome","plastid",null,"mitochondrion",null,null,"plastid","extracellular",null,null,"AT3G25530.1"]
["Os02t0594800-01","Rice","NAC DOMAIN-CONTAINING PROTEIN 50No apical meristem (NAM) protein domain containing protein. (Os02t0594800-01)","2",393,{"v":43591,"d":"43591.000"},{"v":5.43594,"d":"5.436"},{"v":-0.662341,"d":"-0.662"},"mitochondrion,nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT3G01600.1"]
["Os02t0629101-00","Rice","Conserved hypothetical protein. (Os02t0629101-00)","2",117,{"v":12945.2,"d":"12945.200"},{"v":8.46723,"d":"8.467"},{"v":-0.64188,"d":"-0.642"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",null,"extracellular","plastid","cytosol","nucleus",null,"plastid",null,"plastid","mitochondrion","cytosol",null,null,"AT3G25280.1"]
["Os02t0669000-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 42Lipase, GDSL domain containing protein. (Os02t0669000-01)","2",376,{"v":39980.6,"d":"39980.600"},{"v":8.78309,"d":"8.783"},{"v":0.00851064,"d":"0.009"},"endoplasmic reticulum,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"peroxisome",null,null,"AT5G55050.1"]
["Os02t0699700-02","Rice","Similar to DNA topoisomerase II. (Os02t0699700-01);Similar to DNA topoisomerase 2. (Os02t0699700-02)","2",773,{"v":85697.2,"d":"85697.200"},{"v":4.86285,"d":"4.863"},{"v":-0.851358,"d":"-0.851"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","mitochondrion,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G23890.1"]
["Os02t0731700-01","Rice","B-box-containing protein 8, CCT domain-containing gene 9, CCT (CO, CO-LIKE and TOC1) domain protein 9, CCT domain protein 9, \"Grain number, plant height, and heading date2\", CONSTANS-like 1 proteinCCT domain domain containing protein. (Os02t0731700-01);Similar to CONSTANS-like 1 protein. (Os02t0731700-02)","2",347,{"v":38246.4,"d":"38246.400"},{"v":4.51629,"d":"4.516"},{"v":-0.502882,"d":"-0.503"},"endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole",null,null,"AT1G25440.1"]
["Os02t0731700-02","Rice","B-box-containing protein 8, CCT domain-containing gene 9, CCT (CO, CO-LIKE and TOC1) domain protein 9, CCT domain protein 9, \"Grain number, plant height, and heading date2\", CONSTANS-like 1 proteinCCT domain domain containing protein. (Os02t0731700-01);Similar to CONSTANS-like 1 protein. (Os02t0731700-02)","2",452,{"v":49243.4,"d":"49243.400"},{"v":6.26432,"d":"6.264"},{"v":-0.606195,"d":"-0.606"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT1G25440.1"]
["Os02t0750400-01","Rice","Pentatricopeptide repeat domain containing protein. (Os02t0750400-01)","2",212,{"v":23755.7,"d":"23755.700"},{"v":9.73712,"d":"9.737"},{"v":-0.469811,"d":"-0.470"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G39620.2"]
["Os02t0762100-02","Rice","Similar to Regulator of ribonuclease-like protein 2. (Os02t0762100-01);Similar to Regulator of ribonuclease-like protein 2. (Os02t0762100-02)","2",168,{"v":17787.7,"d":"17787.700"},{"v":6.50363,"d":"6.504"},{"v":0.169048,"d":"0.169"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G16450.2"]
["Os02t0821600-00","Rice","Similar to mate efflux family protein. (Os02t0821600-00)","2",491,{"v":52511.6,"d":"52511.600"},{"v":5.21014,"d":"5.210"},{"v":0.536049,"d":"0.536"},"plasma membrane","mitochondrion,cytosol,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","plasma membrane","plastid","mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT4G00350.1"]
["Os02t0822100-02","Rice","silicon efflux transporter 3, Si efflux transporter 3Divalent ion symporter domain containing protein. (Os02t0822100-01);Similar to arsenite transport subunit B. (Os02t0822100-02)","2",447,{"v":48115.5,"d":"48115.500"},{"v":6.93513,"d":"6.935"},{"v":0.398434,"d":"0.398"},"mitochondrion,plasma membrane","mitochondrion,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","golgi","plasma membrane,vacuole","mitochondrion","mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT1G02260.1"]
["Os03t0124900-01","Rice","Pectin lyase fold/virulence factor domain containing protein. (Os03t0124900-01)","3",458,{"v":48900.2,"d":"48900.200"},{"v":5.8337,"d":"5.834"},{"v":-0.05,"d":"-0.050"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:plasma membrane:18260611,msms:extracellular:19038476","18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT3G61490.4"]
["Os03t0174200-01","Rice","Conserved hypothetical protein. (Os03t0174200-01)","3",398,{"v":43242.2,"d":"43242.200"},{"v":9.83593,"d":"9.836"},{"v":-0.827638,"d":"-0.828"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G52110.2"]
["Os03t0198500-02","Rice","Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-01);Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-02);Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-03)","3",247,{"v":27977.7,"d":"27977.700"},{"v":9.87996,"d":"9.880"},{"v":-0.438462,"d":"-0.438"},"mitochondrion","mitochondrion,nucleus,plastid,golgi","nucleus",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","golgi",null,null,"AT1G47740.3"]
["Os03t0198500-03","Rice","Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-01);Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-02);Protein of unknown function DUF862, eukaryotic domain containing protein. (Os03t0198500-03)","3",247,{"v":27977.7,"d":"27977.700"},{"v":9.87996,"d":"9.880"},{"v":-0.438462,"d":"-0.438"},"mitochondrion","mitochondrion,nucleus,plastid,golgi","nucleus",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","nucleus","golgi",null,null,"AT1G47740.3"]
["Os03t0211700-01","Rice","Glycoside hydrolase family 79, N-terminal protein. (Os03t0211700-01);Similar to Heparanase-like protein 2. (Os03t0211700-02)","3",541,{"v":60362.9,"d":"60362.900"},{"v":8.14524,"d":"8.145"},{"v":-0.19427,"d":"-0.194"},"vacuole,golgi","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","vacuole",null,null,"AT5G07830.1"]
["Os03t0229000-01","Rice","Conserved hypothetical protein. (Os03t0229000-01)","3",116,{"v":12486,"d":"12486.000"},{"v":12.2783,"d":"12.278"},{"v":-0.390517,"d":"-0.391"},"plastid","plastid,nucleus","nucleus",null,"nucleus",null,"plastid","nucleus",null,"plastid",null,"plastid","plastid","nucleus",null,null,"AT1G74740.1"]
["Os03t0237600-01","Rice","Similar to ATMAP65-6; microtubule binding. (Os03t0237600-01);MAP65/ASE1 family protein. (Os03t0237600-02);MAP65/ASE1 family protein. (Os03t0237600-04)","3",483,{"v":55412.2,"d":"55412.200"},{"v":5.75305,"d":"5.753"},{"v":-0.620497,"d":"-0.620"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT2G01910.1"]
["Os03t0237600-04","Rice","Similar to ATMAP65-6; microtubule binding. (Os03t0237600-01);MAP65/ASE1 family protein. (Os03t0237600-02);MAP65/ASE1 family protein. (Os03t0237600-04)","3",610,{"v":69583.9,"d":"69583.900"},{"v":7.42242,"d":"7.422"},{"v":-0.688197,"d":"-0.688"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G14690.1"]
["Os03t0247600-02","Rice","Hypothetical conserved gene. (Os03t0247600-01);Hypothetical conserved gene. (Os03t0247600-02)","3",70,{"v":7506.9,"d":"7506.900"},{"v":5.70686,"d":"5.707"},{"v":-0.142857,"d":"-0.143"},"mitochondrion,endoplasmic reticulum,nucleus","mitochondrion,endoplasmic reticulum,nucleus","nucleus",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT1G50730.1"]
["Os03t0295300-01","Rice","Protein of unknown function DUF3615 domain containing protein. (Os03t0295300-01)","3",132,{"v":15186.2,"d":"15186.200"},{"v":9.63239,"d":"9.632"},{"v":-0.481818,"d":"-0.482"},"mitochondrion,extracellular","mitochondrion,cytosol,peroxisome,plastid","plastid",null,"cytosol",null,"mitochondrion","peroxisome,plastid",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT4G18790.1"]
["Os03t0300900-03","Rice","Glycosyl transferase, family 8 protein. (Os03t0300900-01);Glycosyl transferase, family 8 protein. (Os03t0300900-02);Similar to Transferase, transferring glycosyl groups. (Os03t0300900-03)","3",184,{"v":20609.4,"d":"20609.400"},{"v":8.62932,"d":"8.629"},{"v":-0.351087,"d":"-0.351"},"cytosol","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G02720.2"]
["Os03t0308200-01","Rice","SEMI-ROLLED LEAF 2Modulation of leaf rolling, Regulation of abaxial side cell differentiation, Regulation of leaf shape, male fertility and seed size (Os03t0308200-01);Similar to ATP-dependent Clp protease proteolytic subunit. (Os03t0308200-02)","3",988,{"v":110319,"d":"110319.000"},{"v":6.68187,"d":"6.682"},{"v":-0.189676,"d":"-0.190"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","nucleus","nucleus","plastid","plastid",null,"plastid","plastid","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G26850.4"]
["Os03t0338400-01","Rice","basic helix-loop-helix protein 166Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os03t0338400-01)","3",163,{"v":18026.4,"d":"18026.400"},{"v":5.29134,"d":"5.291"},{"v":-0.31227,"d":"-0.312"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT2G40435.1"]
["Os03t0348800-02","Rice","Conserved hypothetical protein. (Os03t0348800-01);Similar to Lipase. (Os03t0348800-02)","3",160,{"v":17987.6,"d":"17987.600"},{"v":6.51019,"d":"6.510"},{"v":-0.150625,"d":"-0.151"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,"cytosol","plastid","mitochondrion","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT5G18640.1"]
["Os03t0439500-02","Rice","2OG-Fe(II) oxygenase domain containing protein. (Os03t0439500-01);2OG-Fe(II) oxygenase domain containing protein. (Os03t0439500-02);2OG-Fe(II) oxygenase domain containing protein. (Os03t0439500-03);Similar to cDNA clone:001-043-E12, full insert sequence. (Os03t0439500-04)","3",372,{"v":41602.5,"d":"41602.500"},{"v":4.76913,"d":"4.769"},{"v":-0.341667,"d":"-0.342"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G17010.1"]
["Os03t0586400-01","Rice","Conserved hypothetical protein. (Os03t0586400-01)","3",114,{"v":12533.9,"d":"12533.900"},{"v":8.97964,"d":"8.980"},{"v":-0.681579,"d":"-0.682"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"plastid",null,"mitochondrion","plastid","mitochondrion"]
["Os03t0638000-00","Rice","Similar to Centromere protein-like protein (Fragment). (Os03t0638000-00)","3",237,{"v":27569.9,"d":"27569.900"},{"v":4.40216,"d":"4.402"},{"v":-0.440506,"d":"-0.441"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT4G14760.1"]
["Os03t0689900-00","Rice","Similar to predicted protein. (Os03t0689900-00)","3",477,{"v":53529.8,"d":"53529.800"},{"v":5.85932,"d":"5.859"},{"v":-0.221384,"d":"-0.221"},"cytosol,plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G27150.1"]
["Os03t0762900-01","Rice","Protein of unknown function DUF566 family protein. (Os03t0762900-01)","3",615,{"v":65048.9,"d":"65048.900"},{"v":11.4371,"d":"11.437"},{"v":-0.436911,"d":"-0.437"},"plastid","plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G49890.1"]
["Os03t0767600-01","Rice","BTB domain containing protein. (Os03t0767600-01)","3",683,{"v":74622.2,"d":"74622.200"},{"v":5.91227,"d":"5.912"},{"v":-0.468521,"d":"-0.469"},"cytosol","mitochondrion,extracellular,nucleus,cytosol,plasma membrane","nucleus",null,"extracellular",null,"cytosol","plasma membrane",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT5G66560.1"]
["Os03t0782500-01","Rice","PIL13Phytochrome-interacting factor-like bHLH protein, Stress-responsive transcription factor, Regulator of reduced internode elongation under drought conditions (Os03t0782500-01)","3",410,{"v":43857.3,"d":"43857.300"},{"v":6.69865,"d":"6.699"},{"v":-0.604634,"d":"-0.605"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G59060.1"]
["Os03t0794500-01","Rice","GLUTAMATE DEHYDROGENASE 1Similar to Glutamate dehydrogenase (EC 1.4.1.3) (GDH). (Os03t0794500-01)","3",411,{"v":44344.1,"d":"44344.100"},{"v":6.58837,"d":"6.588"},{"v":-0.175669,"d":"-0.176"},"mitochondrion","mitochondrion,cytosol","mitochondrion",null,"mitochondrion","mitochondrion","cytosol","mitochondrion",null,"mitochondrion",null,"mitochondrion","cytosol","mitochondrion","msms:mitochondrion:19010998,msms:extracellular:19038476,msms:mitochondrion:23027867,msms:plasma membrane:27800704","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT5G18170.1"]
["Os03t0822100-01","Rice","Similar to Transposase (Fragment). (Os03t0822100-01);Similar to cDNA clone:J033024N05, full insert sequence. (Os03t0822100-02)","3",639,{"v":72268.7,"d":"72268.700"},{"v":8.7855,"d":"8.786"},{"v":-0.396088,"d":"-0.396"},"extracellular","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","nucleus","nucleus",null,"mitochondrion",null,"plastid",null,"plastid","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT3G42170.1"]
["Os03t0841800-01","Rice","Similar to Shaggy-related protein kinase kappa (EC 2.7.1.-) (ASK-kappa) (AtK-1). (Os03t0841800-01);Similar to GSK-3-like protein MsK4. (Os03t0841800-02)","3",424,{"v":48159.3,"d":"48159.300"},{"v":8.57701,"d":"8.577"},{"v":-0.328538,"d":"-0.329"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G09840.3"]
["Os03t0851700-01","Rice","Xbos251, XBOS251Similar to TGB12K interacting protein 3. (Os03t0851700-01)","3",350,{"v":37236.7,"d":"37236.700"},{"v":4.34118,"d":"4.341"},{"v":-0.502857,"d":"-0.503"},"plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plastid",null,"mitochondrion",null,null,"mitochondrion","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G35450.1"]
["Os04t0118100-01","Rice","AMI1Similar to H0613H07.3 protein. (Os04t0118100-01)","4",435,{"v":46182.3,"d":"46182.300"},{"v":5.59719,"d":"5.597"},{"v":0.0912644,"d":"0.091"},"cytosol","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"mitochondrion","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","peroxisome","gfp:cytosol:27135507,msms:plasma membrane:27800704","27135507:Beatriz:B:Sánchez-Parra,Henning:H:Frerigmann,Marta-Marina Pérez:MM:Alonso,Víctor Carrasco:VC:Loba,Ricarda:R:Jost,Mathias:M:Hentrich,Stephan:S:Pollmann:2014,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G08980.1"]
["Os04t0247500-02","Rice","Conserved hypothetical protein. (Os04t0247500-01);Conserved hypothetical protein. (Os04t0247500-02)","4",75,{"v":8890.42,"d":"8890.420"},{"v":7.73986,"d":"7.740"},{"v":-0.529333,"d":"-0.529"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",{"$nulls":3},"cytosol","mitochondrion,peroxisome,plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G03380.1"]
["Os04t0253000-01","Rice","G1/S-phase gene H1Similar to Histone H1. (Os04t0253000-01)","4",191,{"v":19741.4,"d":"19741.400"},11.365,{"v":-0.737173,"d":"-0.737"},"nucleus","mitochondrion,vacuole,plastid,nucleus","nucleus",null,"vacuole","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"plastid","nucleus","mitochondrion","msms:nucleus:19621931","19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT2G18050.1"]
["Os04t0355401-01","Rice","Hypothetical protein. (Os04t0355401-01)","4",178,{"v":19406.2,"d":"19406.200"},12.275,{"v":-0.705618,"d":"-0.706"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus"]
["Os04t0382300-03","Rice","cystathionine b-synthase domain containing protein OsCBSCBS3, CBS domain containing protein OsCBSCBS3Similar to SNF1-related protein kinase regulatory gamma subunit 1 (AKIN gamma1) (AKING1). (Os04t0382300-01);Similar to SNF1-related protein kinase regulatory gamma subunit 1 (AKIN gamma1) (AKING1). (Os04t0382300-02);Similar to OSIGBa0092E09.6 protein. (Os04t0382300-03)","4",343,{"v":37859.4,"d":"37859.400"},{"v":5.45112,"d":"5.451"},{"v":-0.0755102,"d":"-0.076"},"peroxisome","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"peroxisome",null,null,"AT3G48530.1"]
["Os04t0431100-01","Rice","GrpE protein homolog. (Os04t0431100-01);Similar to GrpE protein homolog. (Os04t0431100-02)","4",290,{"v":31512.2,"d":"31512.200"},{"v":7.87272,"d":"7.873"},{"v":-0.444828,"d":"-0.445"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G36390.2"]
["Os04t0450600-00","Rice","Similar to H0818E04.21 protein. (Os04t0450600-00)","4",196,{"v":20641.1,"d":"20641.100"},{"v":4.92875,"d":"4.929"},{"v":0.108163,"d":"0.108"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plasma membrane,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","endoplasmic reticulum",null,null,"AT2G14095.1"]
["Os04t0474800-02","Rice","BETA-GLUCOSIDASE 12Similar to OSIGBa0135C13.7 protein. (Os04t0474800-01);Similar to Isoform 2 of Beta-glucosidase 12. (Os04t0474800-02);Similar to OSIGBa0135C13.7 protein. (Os04t0474800-03)","4",391,{"v":44664.8,"d":"44664.800"},{"v":8.90371,"d":"8.904"},{"v":-0.46624,"d":"-0.466"},"cytosol","mitochondrion,extracellular,cytosol,vacuole,plastid","plastid",null,"extracellular",null,"vacuole","vacuole",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G44480.2"]
["Os04t0477500-02","Rice","OsSTA124Glycosyl transferase, family 17 protein. (Os04t0477500-01);Glycosyl transferase, family 17 protein. (Os04t0477500-02);Glycosyl transferase, family 17 protein. (Os04t0477500-03)","4",388,{"v":45388.8,"d":"45388.800"},{"v":7.78406,"d":"7.784"},{"v":-0.245103,"d":"-0.245"},"cytosol,plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","cytosol,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","plasma membrane",null,null,"AT3G27540.1"]
["Os04t0499100-01","Rice","Biopterin transport-related protein BT1 family protein. (Os04t0499100-01)","4",527,{"v":57124.8,"d":"57124.800"},{"v":5.26112,"d":"5.261"},{"v":0.398482,"d":"0.398"},"plasma membrane,cytosol,peroxisome","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","peroxisome",null,null,"AT5G25050.1"]
["Os04t0501200-01","Rice","TagISimilar to H0311C03.4 protein. (Os04t0501200-01)","4",383,{"v":41379.2,"d":"41379.200"},{"v":9.78547,"d":"9.785"},{"v":-0.329765,"d":"-0.330"},"nucleus","mitochondrion,extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,"extracellular",null,"mitochondrion","cytosol,plasma membrane,plastid,nucleus",null,"plastid",null,"plastid","nucleus","nucleus",null,null,"AT5G57970.2"]
["Os04t0538100-01","Rice","Elongation factor G, III and V domain containing protein. (Os04t0538100-01)","4",386,{"v":42136.6,"d":"42136.600"},{"v":5.36225,"d":"5.362"},{"v":-0.196373,"d":"-0.196"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","cytosol",null,"plastid","plastid","cytosol","mitochondrion",null,"mitochondrion",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","msms:plastid:17189339,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G62750.1"]
["Os04t0592400-02","Rice","t-snare domain containing protein. (Os04t0592400-01);Hypothetical conserved gene. (Os04t0592400-02)","4",416,{"v":46760.6,"d":"46760.600"},{"v":4.45914,"d":"4.459"},{"v":-0.988942,"d":"-0.989"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus",null,null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G16730.1"]
["Os04t0608100-01","Rice","GalK2Ribosomal protein S5 domain 2-type fold domain containing protein. (Os04t0608100-01);Similar to OSIGBa0113I13.15 protein. (Os04t0608100-02)","4",430,{"v":46328.5,"d":"46328.500"},{"v":6.26523,"d":"6.265"},{"v":-0.0134884,"d":"-0.013"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G10700.1"]
["Os04t0612500-01","Rice","Similar to 36.4 kDa proline-rich protein. (Os04t0612500-01);Similar to Prolin rich protein. (Os04t0612500-02)","4",89,{"v":8644.87,"d":"8644.870"},{"v":8.04089,"d":"8.041"},{"v":1.15955,"d":"1.160"},"plasma membrane,endoplasmic reticulum,vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT4G12480.1"]
["Os04t0631200-01","Rice","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 3Similar to cDNA clone:J033024P08, full insert sequence. (Os04t0631200-01);Similar to Xyloglucan endotransglycosylase (Fragment). (Os04t0631200-02)","4",328,{"v":35731.4,"d":"35731.400"},{"v":12.5037,"d":"12.504"},{"v":-0.584146,"d":"-0.584"},"vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","vacuole",null,null,"AT4G03210.1"]
["Os04t0632400-02","Rice","Hypothetical protein. (Os04t0632400-01);Hypothetical protein. (Os04t0632400-02);Hypothetical protein. (Os04t0632400-03);Hypothetical gene. (Os04t0632400-04)","4",83,{"v":9201.36,"d":"9201.360"},{"v":10.0574,"d":"10.057"},{"v":0.00361446,"d":"0.004"},"cytosol","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,peroxisome,plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT3G16310.1"]
["Os04t0632400-03","Rice","Hypothetical protein. (Os04t0632400-01);Hypothetical protein. (Os04t0632400-02);Hypothetical protein. (Os04t0632400-03);Hypothetical gene. (Os04t0632400-04)","4",83,{"v":9201.36,"d":"9201.360"},{"v":10.0574,"d":"10.057"},{"v":0.00361446,"d":"0.004"},"cytosol","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","plasma membrane,peroxisome,plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT3G16310.1"]
["Os04t0649051-01","Rice","Similar to H0211B05.9 protein. (Os04t0649051-01)","4",109,{"v":11801.3,"d":"11801.300"},{"v":11.1538,"d":"11.154"},{"v":-0.0623853,"d":"-0.062"},"plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",{"$nulls":3},"mitochondrion","extracellular,plastid,nucleus",null,"mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT1G78010.1"]
["Os05t0103300-01","Rice","Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-01);Similar to AT.I.24-5 protein (Fragment). (Os05t0103300-02)","5",72,{"v":7930.06,"d":"7930.060"},{"v":7.36003,"d":"7.360"},1.175,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","extracellular",null,null,"AT3G01950.1"]
["Os05t0131900-02","Rice","Hypothetical conserved gene. (Os05t0131900-01);Conserved hypothetical protein. (Os05t0131900-02)","5",88,{"v":9193.42,"d":"9193.420"},{"v":4.32345,"d":"4.323"},{"v":-0.665909,"d":"-0.666"},"cytosol,plastid,nucleus","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane,cytosol,peroxisome,nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT1G77590.2"]
["Os05t0142400-01","Rice","Conserved hypothetical protein. (Os05t0142400-01)","5",78,{"v":8313.18,"d":"8313.180"},{"v":10.9606,"d":"10.961"},{"v":-0.0487179,"d":"-0.049"},"cytosol,extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol","msms:extracellular:18372294","18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008","AT4G09190.1"]
["Os05t0211100-01","Rice","P-450 51G3Similar to Cytochrome P450-like protein. (Os05t0211100-01);Obtusifoliol 14a-demethylase, Phytosterol and Brassinosteroid biosynthesis (Os05t0211100-02)","5",480,{"v":53230.1,"d":"53230.100"},{"v":9.81357,"d":"9.814"},{"v":-0.276042,"d":"-0.276"},"mitochondrion","mitochondrion,endoplasmic reticulum,plastid,golgi","plastid",null,"golgi","mitochondrion","mitochondrion","endoplasmic reticulum",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G11680.1"]
["Os05t0230700-02","Rice","IAA17Similar to Auxin-responsive protein IAA17. (Os05t0230700-01);Similar to Auxin-responsive protein IAA17. (Os05t0230700-02);Similar to Auxin-responsive protein IAA17. (Os05t0230700-03)","5",257,{"v":27472.4,"d":"27472.400"},{"v":7.34706,"d":"7.347"},{"v":-0.591051,"d":"-0.591"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G65670.2"]
["Os05t0299200-00","Rice","Hypothetical conserved gene. (Os05t0299200-00)","5",496,{"v":54052.8,"d":"54052.800"},{"v":10.5635,"d":"10.564"},{"v":-0.181048,"d":"-0.181"},"plasma membrane","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",null,null,"plastid","cytosol","nucleus","plastid","mitochondrion",null,null,"plastid","extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G43235.1"]
["Os05t0324100-01","Rice","N2,N2-dimethylguanosine tRNA methyltransferase family protein. (Os05t0324100-01)","5",98,{"v":10783.9,"d":"10783.900"},{"v":5.11963,"d":"5.120"},{"v":-0.260204,"d":"-0.260"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G56330.1"]
["Os05t0405000-01","Rice","FLOURY ENDOSPERM 4Orthophosphate dikinase precursor (EC 2.7.9.1). (Os05t0405000-01);Similar to Isoform 2 of Pyruvate, phosphate dikinase 1, chloroplastic. (Os05t0405000-02)","5",947,{"v":102794,"d":"102794.000"},{"v":6.31451,"d":"6.315"},{"v":-0.15924,"d":"-0.159"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","mitochondrion","cytosol","plastid","plastid","mitochondrion",null,"plastid","plastid","mitochondrion","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G15530.4"]
["Os05t0452800-01","Rice","Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0452800-01)","5",244,{"v":26307.9,"d":"26307.900"},{"v":4.27029,"d":"4.270"},{"v":-0.482787,"d":"-0.483"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G05830.1"]
["Os05t0455500-02","Rice","P5C SYNTHETASESimilar to Delta-1-pyrroline-5-carboxylate synthetase. (Os05t0455500-01);Similar to Delta 1-pyrroline-5-carboxylate synthetase (P5CS). (Os05t0455500-02)","5",716,{"v":77749.8,"d":"77749.800"},{"v":6.8294,"d":"6.829"},{"v":-0.0597765,"d":"-0.060"},"plasma membrane","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","cytosol",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:18260611,msms:plasma membrane:27800704,msms:plastid:27992503,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT3G55610.1"]
["Os05t0517500-01","Rice","Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). (Os05t0517500-01);Similar to Gamma-glutamyl hydrolase. (Os05t0517500-02)","5",337,{"v":36932.2,"d":"36932.200"},{"v":8.54284,"d":"8.543"},{"v":-0.0756677,"d":"-0.076"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G78680.1"]
["Os05t0561400-00","Rice","Conserved hypothetical protein. (Os05t0561400-00)","5",75,{"v":7938.75,"d":"7938.750"},{"v":11.7696,"d":"11.770"},0.044,"extracellular,golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT3G19030.1"]
["Os05t0567100-02","Rice","Oryzasin, Oryzasin 1Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-01);Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-). (Os05t0567100-02);Similar to Phytepsin. (Os05t0567100-03)","5",509,{"v":54076.7,"d":"54076.700"},{"v":4.97339,"d":"4.973"},{"v":0.0269155,"d":"0.027"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:19038476,msms:cytosol:19685898,msms:extracellular:24083427,msms:nucleus:26035336,msms:plastid:27992503","19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G11910.1"]
["Os05t0567800-02","Rice","Similar to solute carrier family 2, facilitated glucose transporter member 8. (Os05t0567800-01);Similar to Integral membrane protein. (Os05t0567800-02)","5",501,{"v":53803.4,"d":"53803.400"},{"v":8.71864,"d":"8.719"},{"v":0.605589,"d":"0.606"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"golgi","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT1G75220.1"]
["Os05t0586600-01","Rice","SIGMA FACTOR 5Similar to SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor. (Os05t0586600-01)","5",355,{"v":39402.3,"d":"39402.300"},{"v":8.27331,"d":"8.273"},{"v":-0.830704,"d":"-0.831"},"plastid","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,"plastid",null,"nucleus","gfp:plastid:17148693,msms:extracellular:25047395","17148693:Yoshiki:Y:Kubota,Akio:A:Miyao,Hirohiko:H:Hirochika,Yuzuru:Y:Tozawa,Hiroyuki:H:Yasuda,Yuichi:Y:Tsunoyama,Yasuo:Y:Niwa,Sousuke:S:Imamura,Makoto:M:Shirai,Munehiko:M:Asayama:2007,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT5G24120.1"]
["Os06t0114500-01","Rice","Similar to ATOZI1 protein (Stress-induced protein OZI1) (AT0ZI1 protein). (Os06t0114500-01);Similar to ATOZI1 protein (Stress-induced protein OZI1) (AT0ZI1 protein). (Os06t0114500-02)","6",79,{"v":8786.54,"d":"8786.540"},{"v":9.18373,"d":"9.184"},{"v":-0.16962,"d":"-0.170"},"mitochondrion","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane,extracellular,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:mitochondrion:19010998,msms:nucleus:19621931,msms:plastid:21433289,msms:mitochondrion:23027867","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G01170.1"]
["Os06t0155900-01","Rice","Conserved hypothetical protein. (Os06t0155900-01);Conserved hypothetical protein. (Os06t0155900-02)","6",261,{"v":31096.1,"d":"31096.100"},{"v":4.39239,"d":"4.392"},{"v":-0.896169,"d":"-0.896"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","nucleus",null,null,"AT5G57655.1"]
["Os06t0196900-02","Rice","Similar to Chaperonin. (Os06t0196900-01);Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os06t0196900-02);Similar to Chaperonin. (Os06t0196900-03)","6",221,{"v":22979.7,"d":"22979.700"},{"v":8.43353,"d":"8.434"},{"v":-0.0710407,"d":"-0.071"},"plastid","peroxisome,plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid","peroxisome","plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289,msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G20720.1"]
["Os06t0240050-00","Rice","BURP domain-containing protein 9BURP domain-containing protein 9. (Os06t0240050-00)","6",500,{"v":57753.7,"d":"57753.700"},{"v":6.51001,"d":"6.510"},{"v":-0.7708,"d":"-0.771"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","extracellular","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,null,"AT5G25610.1"]
["Os06t0295900-01","Rice","Hypothetical conserved gene. (Os06t0295900-01)","6",98,{"v":10071.2,"d":"10071.200"},{"v":6.22598,"d":"6.226"},{"v":0.631633,"d":"0.632"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"extracellular",null,null,"AT1G80730.1"]
["Os06t0472000-02","Rice","Methionine sulfoxide reductase B1, Methionine sulfoxide reductase B1.1, peptide methionine sulfoxide reductaseMethionine sulphoxide reductase B domain containing protein. (Os06t0472000-01);Hypothetical gene. (Os06t0472000-02)","6",107,{"v":12092,"d":"12092.000"},{"v":12.3571,"d":"12.357"},{"v":-0.488785,"d":"-0.489"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","nucleus","nucleus",null,"plastid",null,"plastid",null,"cytosol",null,null,"AT5G67230.1"]
["Os06t0531200-01","Rice","DJ-1/PfpI domain containing protein E, DJ-1 protein EThiJ/PfpI domain containing protein. (Os06t0531200-01);Hypothetical conserved gene. (Os06t0531200-02)","6",394,{"v":41695.8,"d":"41695.800"},{"v":5.32727,"d":"5.327"},{"v":0.0906091,"d":"0.091"},"plastid","mitochondrion,cytosol,peroxisome,plastid","cytosol",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"plastid","peroxisome","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G53280.1"]
["Os06t0531200-02","Rice","DJ-1/PfpI domain containing protein E, DJ-1 protein EThiJ/PfpI domain containing protein. (Os06t0531200-01);Hypothetical conserved gene. (Os06t0531200-02)","6",289,{"v":30970.8,"d":"30970.800"},{"v":5.4784,"d":"5.478"},{"v":0.0692042,"d":"0.069"},"plasma membrane","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol",null,null,"mitochondrion",null,"plastid",null,"extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G53280.1"]
["Os06t0572400-01","Rice","TETRASPANIN 9Tetraspanin domain containing protein. (Os06t0572400-01)","6",272,{"v":29804,"d":"29804.000"},{"v":8.47061,"d":"8.471"},{"v":0.316544,"d":"0.317"},"plasma membrane,endoplasmic reticulum,extracellular","mitochondrion,plasma membrane,unclear,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","mitochondrion,plasma membrane,unclear,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,null,"AT2G19580.1"]
["Os06t0614400-01","Rice","Conserved hypothetical protein. (Os06t0614400-01)","6",51,{"v":5586.94,"d":"5586.940"},{"v":12.5,"d":"12.500"},{"v":-0.147059,"d":"-0.147"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,nucleus,cytosol,plastid","nucleus",{"$nulls":3},"extracellular","plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT2G31280.2"]
["Os06t0678700-01","Rice","Conserved hypothetical protein. (Os06t0678700-01);Hypothetical gene. (Os06t0678700-02);Hypothetical conserved gene. (Os06t0678700-03)","6",533,{"v":59432,"d":"59432.000"},{"v":7.66894,"d":"7.669"},{"v":0.0270169,"d":"0.027"},"mitochondrion,cytosol,plasma membrane,plastid","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,"plasma membrane","mitochondrion","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","plasma membrane","plastid",null,null,"AT2G22125.1"]
["Os06t0683300-01","Rice","BETA-GLUCOSIDASE 25Similar to Beta-glucosidase. (Os06t0683300-01)","6",314,{"v":35401.1,"d":"35401.100"},{"v":4.43779,"d":"4.438"},{"v":-0.316561,"d":"-0.317"},"plastid","vacuole,extracellular,plastid,nucleus","nucleus",null,"extracellular","plastid","vacuole","vacuole,plastid",null,"plastid",null,"plastid",null,"plastid",null,null,"AT5G54570.3"]
["Os06t0695700-01","Rice","Calmodulin-binding, plant family protein. (Os06t0695700-01)","6",602,{"v":63551.6,"d":"63551.600"},{"v":4.30705,"d":"4.307"},{"v":-0.964286,"d":"-0.964"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion",null,"plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT5G61260.1"]
["Os06t0704600-01","Rice","5-aminolevulinate dehydrogenase, ALA dehydrataseSimilar to Delta-aminolevulinic acid dehydratase (Fragment). (Os06t0704600-01);Similar to Delta-aminolevulinic acid dehydratase (Fragment). (Os06t0704600-02)","6",426,{"v":46288.3,"d":"46288.300"},{"v":6.01554,"d":"6.016"},{"v":-0.237324,"d":"-0.237"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G69740.2"]
["Os06t0712500-01","Rice","Similar to Glycosyltransferase QUASIMODO1 (EC 2.4.1.-). (Os06t0712500-01)","6",447,{"v":50936.9,"d":"50936.900"},{"v":9.64524,"d":"9.645"},{"v":-0.302908,"d":"-0.303"},"golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","golgi","msms:golgi:25047511","25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT2G46480.1"]
["Os06t0712700-01","Rice","SUPERWOMAN 1Transcription factor, Development of lodicules and stamens (Os06t0712700-01)","6",224,{"v":25465.3,"d":"25465.300"},{"v":8.62816,"d":"8.628"},{"v":-0.662054,"d":"-0.662"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G54340.1"]
["Os07t0102200-01","Rice","OsSTA184Conserved hypothetical protein. (Os07t0102200-01)","7",537,{"v":60280,"d":"60280.000"},{"v":9.98242,"d":"9.982"},{"v":-0.981006,"d":"-0.981"},"mitochondrion,nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus",null,"mitochondrion","mitochondrion",null,"plastid","mitochondrion","nucleus",null,null,"AT1G50660.1"]
["Os07t0277600-02","Rice","Conserved hypothetical protein. (Os07t0277600-01);Conserved hypothetical protein. (Os07t0277600-02)","7",42,{"v":4979.15,"d":"4979.150"},{"v":10.4858,"d":"10.486"},{"v":-0.254762,"d":"-0.255"},"mitochondrion,cytosol,extracellular","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",null,"nucleus","plastid","extracellular","mitochondrion,plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT1G54290.1"]
["Os07t0450100-01","Rice","Hypothetical conserved gene. (Os07t0450100-01)","7",137,{"v":14982,"d":"14982.000"},{"v":9.32047,"d":"9.320"},{"v":-0.237226,"d":"-0.237"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid","nucleus","plastid",null,null,"AT1G63130.1"]
["Os07t0559100-01","Rice","Hypothetical conserved gene. (Os07t0559100-01)","7",73,{"v":7591.04,"d":"7591.040"},{"v":11.6192,"d":"11.619"},{"v":-0.106849,"d":"-0.107"},"mitochondrion","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G28240.1"]
["Os07t0581366-00","Rice","indeterminate domain 5Zinc finger, C2H2 domain containing protein. (Os07t0581366-00)","7",634,{"v":67132.7,"d":"67132.700"},{"v":5.91428,"d":"5.914"},{"v":-0.573028,"d":"-0.573"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G03840.1"]
["Os07t0630800-01","Rice","Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-01);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-02);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-03);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-04)","7",404,{"v":42224.1,"d":"42224.100"},{"v":9.02914,"d":"9.029"},{"v":0.113366,"d":"0.113"},"plastid","mitochondrion,plastid","plastid",null,"plastid","plastid","plastid","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G53240.1"]
["Os07t0630800-04","Rice","Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-01);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-02);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-03);Similar to Nodule-enhanced malate dehydrogenase. (Os07t0630800-04)","7",404,{"v":42224.1,"d":"42224.100"},{"v":9.02914,"d":"9.029"},{"v":0.113366,"d":"0.113"},"plastid","mitochondrion,plastid","plastid",null,"plastid","plastid","plastid","mitochondrion,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G53240.1"]
["Os07t0630900-01","Rice","CELLULOSE SYNTHASE LIKE A7Similar to cDNA clone:J013000F18, full insert sequence. (Os07t0630900-01);CSLA7 (Fragment). (Os07t0630900-02)","7",284,{"v":30795.3,"d":"30795.300"},{"v":4.6981,"d":"4.698"},{"v":0.25493,"d":"0.255"},"cytosol,plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT4G13410.1"]
["Os07t0668700-01","Rice","Lipase, class 3 family protein. (Os07t0668700-01);Lipase, class 3 family protein. (Os07t0668700-02)","7",358,{"v":40142.7,"d":"40142.700"},{"v":5.98704,"d":"5.987"},{"v":-0.0153631,"d":"-0.015"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","cytosol","golgi",null,null,"AT5G18640.3"]
["Os07t0695700-00","Rice","Hypothetical conserved gene. (Os07t0695700-00)","7",243,{"v":27304.2,"d":"27304.200"},{"v":9.31972,"d":"9.320"},{"v":-0.636626,"d":"-0.637"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G09430.1"]
["Os08t0115200-01","Rice","IQ calmodulin-binding region domain containing protein. (Os08t0115200-01)","8",543,{"v":59021.8,"d":"59021.800"},{"v":11.5005,"d":"11.501"},{"v":-0.741989,"d":"-0.742"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus","mitochondrion","mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G00820.1"]
["Os08t0123400-00","Rice","Similar to predicted protein. (Os08t0123400-00)","8",126,{"v":13936.8,"d":"13936.800"},{"v":11.9316,"d":"11.932"},{"v":-0.265873,"d":"-0.266"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","mitochondrion","nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT4G39300.2"]
["Os08t0161800-01","Rice","Similar to Choline-phosphate cytidylyltransferase B. (Os08t0161800-01);Similar to Cholinephosphate cytidylyltransferase. (Os08t0161800-02)","8",67,{"v":7618.21,"d":"7618.210"},{"v":5.4793,"d":"5.479"},{"v":0.280597,"d":"0.281"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol",null,null,"AT5G27980.1"]
["Os08t0233300-01","Rice","Similar to cDNA clone:J013061K19, full insert sequence. (Os08t0233300-01);Similar to cDNA clone:J013001A08, full insert sequence. (Os08t0233300-02)","8",61,{"v":7565.35,"d":"7565.350"},{"v":9.99348,"d":"9.993"},{"v":0.444262,"d":"0.444"},"mitochondrion,plasma membrane,extracellular,plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,"plasma membrane","mitochondrion","extracellular","nucleus,plastid,golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT5G19220.1"]
["Os08t0233300-02","Rice","Similar to cDNA clone:J013061K19, full insert sequence. (Os08t0233300-01);Similar to cDNA clone:J013001A08, full insert sequence. (Os08t0233300-02)","8",88,{"v":9377,"d":"9377.000"},{"v":7.38541,"d":"7.385"},{"v":-0.169318,"d":"-0.169"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G48250.1"]
["Os08t0278750-01","Rice","Similar to nucleotidyltransferase family protein. (Os08t0278750-01)","8",78,{"v":8218.79,"d":"8218.790"},{"v":12.2927,"d":"12.293"},{"v":-0.207692,"d":"-0.208"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"plastid",null,"mitochondrion",null,null,"AT2G25850.9"]
["Os08t0300200-02","Rice","Similar to plant synaptotagmin. (Os08t0300200-02)","8",73,{"v":8128.02,"d":"8128.020"},{"v":10.1072,"d":"10.107"},{"v":0.349315,"d":"0.349"},"plasma membrane","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane","msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT1G05500.1"]
["Os08t0428400-01","Rice","TIFY GENE 6ATify domain containing protein. (Os08t0428400-01);Similar to ZIM motif family protein. (Os08t0428400-02)","8",427,{"v":44852.6,"d":"44852.600"},{"v":9.94454,"d":"9.945"},{"v":-0.398595,"d":"-0.399"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G17860.1"]
["Os08t0490600-01","Rice","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4FAS1 domain domain containing protein. (Os08t0490600-01)","8",181,{"v":18919.4,"d":"18919.400"},{"v":8.4322,"d":"8.432"},{"v":-0.19779,"d":"-0.198"},"mitochondrion","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"mitochondrion","cytosol","plasma membrane","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G55730.1"]
["Os08t0497300-03","Rice","Sec14-nodulin domain-containing protein 9, Sec14-nodulin domain protein 9Cellular retinaldehyde binding/alpha-tocopherol transport family protein. (Os08t0497300-01);Similar to SEC14 cytosolic factor (Secretion factor 14) family protein (Fragment). (Os08t0497300-02);Similar to phosphatidylinositol transporter/ transporter. (Os08t0497300-03)","8",476,{"v":54150.2,"d":"54150.200"},{"v":7.00351,"d":"7.004"},{"v":-0.551681,"d":"-0.552"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G19650.1"]
["Os08t0526200-02","Rice","Conserved hypothetical protein. (Os08t0526200-01);Conserved hypothetical protein. (Os08t0526200-02)","8",81,{"v":8811.74,"d":"8811.740"},{"v":11.8324,"d":"11.832"},{"v":-0.00493827,"d":"-0.005"},"plastid","endoplasmic reticulum,plastid","plastid",null,null,"plastid","endoplasmic reticulum","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G29780.1"]
["Os08t0529400-00","Rice","F-box protein 464F-box domain, cyclin-like domain containing protein. (Os08t0529400-00)","8",387,{"v":41510.8,"d":"41510.800"},{"v":6.4941,"d":"6.494"},{"v":0.139793,"d":"0.140"},"plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","vacuole",null,null,"AT1G15680.1"]
["Os08t0536100-03","Rice","Hypothetical conserved gene. (Os08t0536100-01);Hypothetical conserved gene. (Os08t0536100-02);Conserved hypothetical protein. (Os08t0536100-03);Hypothetical conserved gene. (Os08t0536100-04)","8",704,{"v":77379.2,"d":"77379.200"},{"v":6.97707,"d":"6.977"},{"v":-0.644744,"d":"-0.645"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT3G26890.2"]
["Os08t0562100-01","Rice","Similar to Sorghum chloroplast CM3 malate dehydrogenase (NADP) (Fragment). (Os08t0562100-01);Similar to Sorghum chloroplast CM3 malate dehydrogenase (NADP) (Fragment). (Os08t0562100-02)","8",433,{"v":47011.5,"d":"47011.500"},{"v":7.33927,"d":"7.339"},{"v":-0.182448,"d":"-0.182"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G58330.2"]
["Os09t0125400-00","Rice","Hypothetical conserved gene. (Os09t0125400-00)","9",109,{"v":12407.7,"d":"12407.700"},{"v":10.2334,"d":"10.233"},{"v":-1.21101,"d":"-1.211"},"nucleus","mitochondrion,extracellular,nucleus","nucleus",null,"extracellular",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G36580.1"]
["Os09t0130800-04","Rice","Similar to predicted protein. (Os09t0130800-01);DEAD-like helicase, N-terminal domain containing protein. (Os09t0130800-02);Similar to predicted protein. (Os09t0130800-03);Similar to predicted protein. (Os09t0130800-04)","9",336,{"v":36692,"d":"36692.000"},{"v":6.03921,"d":"6.039"},{"v":-0.0217262,"d":"-0.022"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G35970.1"]
["Os09t0266000-02","Rice","Similar to predicted protein. (Os09t0266000-01);RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein. (Os09t0266000-02);Similar to predicted protein. (Os09t0266000-03)","9",331,{"v":36671.4,"d":"36671.400"},{"v":10.0334,"d":"10.033"},{"v":-0.0752266,"d":"-0.075"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT1G71480.1"]
["Os09t0422500-01","Rice","BRITTLE CULM 6Cellulose synthase A catalytic subunit 9, Cell wall biosynthesis and plant growth (Os09t0422500-01)","9",{"v":1055,"d":"1,055"},{"v":118704,"d":"118704.000"},{"v":6.84862,"d":"6.849"},{"v":-0.212607,"d":"-0.213"},"cytosol,plasma membrane,nucleus","mitochondrion,nucleus,cytosol,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","nucleus",null,null,"AT5G17420.1"]
["Os09t0436500-02","Rice","Conserved hypothetical protein. (Os09t0436500-01);Similar to predicted protein. (Os09t0436500-02);Similar to leucine-rich repeat protein kinase. (Os09t0436500-03)","9",198,{"v":21647.3,"d":"21647.300"},{"v":8.84379,"d":"8.844"},{"v":0.148485,"d":"0.148"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT2G21960.1"]
["Os09t0450600-00","Rice","Similar to Protein HVA22. (Os09t0450600-00)","9",163,{"v":19137.4,"d":"19137.400"},{"v":9.27882,"d":"9.279"},{"v":0.125767,"d":"0.126"},"mitochondrion","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","plasma membrane",null,null,"AT5G50720.1"]
["Os09t0474051-01","Rice","Hypothetical conserved gene. (Os09t0474051-01)","9",585,{"v":64062.3,"d":"64062.300"},{"v":7.49851,"d":"7.499"},{"v":-0.065812,"d":"-0.066"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","nucleus","plastid","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plastid",null,null,"AT5G48910.1"]
["Os09t0495000-00","Rice","Conserved hypothetical protein. (Os09t0495000-00)","9",265,{"v":29707.7,"d":"29707.700"},{"v":6.11514,"d":"6.115"},{"v":0.110943,"d":"0.111"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G38550.1"]
["Os09t0508500-02","Rice","DRB5Similar to Isoform 2 of Double-stranded RNA-binding protein 5. (Os09t0508500-01);Similar to Double-stranded RNA binding motif family protein. (Os09t0508500-02)","9",404,{"v":43142.5,"d":"43142.500"},{"v":12.2323,"d":"12.232"},{"v":-0.452723,"d":"-0.453"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol",null,"nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT3G26932.2"]
["Os09t0528000-01","Rice","KIN7JKinesin, motor region domain containing protein. (Os09t0528000-01);Kinesin, motor region domain containing protein. (Os09t0528000-02);Hypothetical conserved gene. (Os09t0528000-03)","9",862,{"v":97730,"d":"97730.000"},{"v":6.57284,"d":"6.573"},{"v":-0.628654,"d":"-0.629"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G21300.5"]
["Os09t0529900-01","Rice","Pyruvate/Phosphoenolpyruvate kinase, catalytic core domain containing protein. (Os09t0529900-01)","9",348,{"v":36827.1,"d":"36827.100"},{"v":5.15714,"d":"5.157"},{"v":-0.0856322,"d":"-0.086"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:nucleus:26035336,msms:plastid:27992503","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G10750.1"]
["Os10t0130500-01","Rice","Hypothetical protein. (Os10t0130500-01);Hypothetical protein. (Os10t0130500-02)","10",72,{"v":8226.53,"d":"8226.530"},{"v":12.2457,"d":"12.246"},{"v":-1.23056,"d":"-1.231"},"mitochondrion,cytosol,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT3G05625.2"]
["Os10t0185100-01","Rice","Conserved hypothetical protein. (Os10t0185100-01)","10",48,{"v":5510.44,"d":"5510.440"},{"v":4.98419,"d":"4.984"},{"v":-1.05625,"d":"-1.056"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G09960.1"]
["Os10t0370500-01","Rice","Glycoside hydrolase, catalytic core domain containing protein. (Os10t0370500-01)","10",510,{"v":56402.2,"d":"56402.200"},{"v":5.28253,"d":"5.283"},{"v":-0.200196,"d":"-0.200"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","vacuole","msms:extracellular:19038476,msms:extracellular:23159799,msms:extracellular:24083427,msms:extracellular:25047395,msms:extracellular:26072143,msms:extracellular:28232208","26072143:Ba:B:Du,Zhe:Z:Wei,Zhanqi:Z:Wang,Xiaoxiao:X:Wang,Xinxin:X:Peng,Bo:B:Du,Rongzhi:R:Chen,Lili:L:Zhu,Guangcun:G:He:2015,25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G12960.1"]
["Os10t0374700-01","Rice","Hypothetical protein. (Os10t0374700-01)","10",117,{"v":12881.2,"d":"12881.200"},{"v":9.06789,"d":"9.068"},{"v":-0.44359,"d":"-0.444"},"plastid","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT3G02875.1"]
["Os10t0437700-01","Rice","Heat shock protein Hsp20 domain containing protein. (Os10t0437700-01)","10",163,{"v":18014,"d":"18014.000"},{"v":10.7849,"d":"10.785"},{"v":-0.315337,"d":"-0.315"},"cytosol,plasma membrane","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G04890.1"]
["Os10t0468950-01","Rice","Hypothetical protein. (Os10t0468950-01)","10",146,{"v":15483.5,"d":"15483.500"},{"v":12.3739,"d":"12.374"},{"v":-0.332877,"d":"-0.333"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT4G27870.2"]
["Os10t0493600-03","Rice","Alpha-D-galactoside galactohydrolase, alpha-galactosidase 1, alpha-galactosidase IAlpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D- galactoside galactohydrolase). (Os10t0493600-01);Alpha-galactosidase (EC 3.2.1.22). (Os10t0493600-02);Similar to Alpha-galactosidase. (Os10t0493600-03);Similar to Alpha-galactosidase (Fragment). (Os10t0493600-04)","10",369,{"v":40876.6,"d":"40876.600"},{"v":7.13575,"d":"7.136"},{"v":-0.533604,"d":"-0.534"},"mitochondrion","mitochondrion,extracellular,cytosol,golgi,plastid","plastid",null,"golgi",null,"mitochondrion","extracellular",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT5G08370.1"]
["Os10t0517050-01","Rice","Hypothetical conserved gene. (Os10t0517050-01)","10",45,{"v":5017.94,"d":"5017.940"},{"v":6.21193,"d":"6.212"},{"v":-0.231111,"d":"-0.231"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"ATCG00530.1"]
["Os10t0564500-01","Rice","STRESS/ABA-ACTIVATED PROTEIN KINASE 3Serine/threonine protein kinase, Hyperosmotic stress response (Os10t0564500-01)","10",334,{"v":37875.2,"d":"37875.200"},{"v":5.73696,"d":"5.737"},{"v":-0.423653,"d":"-0.424"},"cytosol,plastid","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G10940.1"]
["Os11t0170200-01","Rice","Protein of unknown function DUF869, plant family protein. (Os11t0170200-01)","11",901,{"v":99382.9,"d":"99382.900"},{"v":4.64222,"d":"4.642"},{"v":-0.607325,"d":"-0.607"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT1G77580.3"]
["Os11t0183800-00","Rice","Similar to Armadillo/beta-catenin-like repeat family protein, expressed. (Os11t0183800-00)","11",{"v":1094,"d":"1,094"},{"v":119073,"d":"119073.000"},{"v":5.16696,"d":"5.167"},{"v":0.160329,"d":"0.160"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","cytosol",null,null,"AT1G77460.1"]
["Os11t0204600-01","Rice","Similar to Glucose-1-phosphate adenylyltransferase. (Os11t0204600-01)","11",84,{"v":9406.18,"d":"9406.180"},{"v":9.1258,"d":"9.126"},{"v":-0.147619,"d":"-0.148"},"mitochondrion","mitochondrion,extracellular,cytosol,peroxisome,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","cytosol,peroxisome,extracellular,plastid",null,"mitochondrion",null,"mitochondrion",null,"plastid",null,null,"AT4G39210.1"]
["Os11t0275200-01","Rice","Similar to Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-). (Os11t0275200-01)","11",266,{"v":28692.2,"d":"28692.200"},{"v":6.3425,"d":"6.343"},{"v":0.0255639,"d":"0.026"},"extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT3G23570.1"]
["Os11t0309000-03","Rice","Synaptojanin, N-terminal domain containing protein. (Os11t0309000-01);Similar to predicted protein. (Os11t0309000-02);Synaptojanin, N-terminal domain containing protein. (Os11t0309000-03)","11",597,{"v":68244.9,"d":"68244.900"},{"v":8.64185,"d":"8.642"},{"v":-0.252094,"d":"-0.252"},"mitochondrion,cytosol,peroxisome,plasma membrane","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,"mitochondrion","plasma membrane","cytosol",null,null,"AT3G51460.1"]
["Os11t0605500-01","Rice","Acyl-CoA oxidase. (Os11t0605500-01)","11",699,{"v":77219.3,"d":"77219.300"},{"v":8.72656,"d":"8.727"},{"v":-0.222747,"d":"-0.223"},"peroxisome","mitochondrion,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","peroxisome",null,"mitochondrion",null,null,"mitochondrion","peroxisome",null,null,"AT5G65110.1"]
["Os11t0638000-02","Rice","Similar to GTP-binding protein engA. (Os11t0638000-01);Similar to Small GTP-binding protein domain containing protein, expressed. (Os11t0638000-02)","11",21,{"v":2133.52,"d":"2133.520"},{"v":9.69501,"d":"9.695"},{"v":-0.0952381,"d":"-0.095"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus"]
["Os12t0137200-01","Rice","Similar to Saccharopine dehydrogenase family protein, expressed. (Os12t0137200-01)","12",427,{"v":46008.1,"d":"46008.100"},{"v":6.18482,"d":"6.185"},{"v":-0.0030445,"d":"-0.003"},"plastid","mitochondrion,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G50450.1"]
["Os12t0152800-02","Rice","SULFURTRANSFERASE 19Rhodanese-like domain containing protein. (Os12t0152800-01);Rhodanese-like domain containing protein. (Os12t0152800-02);Rhodanese-like domain containing protein. (Os12t0152800-03)","12",239,{"v":26632.9,"d":"26632.900"},{"v":10.1313,"d":"10.131"},{"v":0.103766,"d":"0.104"},"endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum",null,null,"AT5G56610.1"]
["Os12t0175500-01","Rice","GLUTAREDOXIN 27Similar to Glutaredoxin-like protein. (Os12t0175500-01)","12",285,{"v":30591.5,"d":"30591.500"},{"v":8.49545,"d":"8.495"},{"v":-0.26,"d":"-0.260"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"mitochondrion","mitochondrion","cytosol","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G38270.1"]
["Os12t0178633-00","Rice","OsWD40-196, OsSTA276WD40 repeat domain containing protein. (Os12t0178633-00)","12",725,{"v":75867.9,"d":"75867.900"},{"v":9.04512,"d":"9.045"},{"v":-0.428828,"d":"-0.429"},"plasma membrane","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"plastid",null,"plastid",null,"mitochondrion","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT3G15470.1"]
["Os12t0197500-03","Rice","suppressor of gene silencing 3Homolog of Arabidopsis suppressor of gene silencing 3, Cofactor of RNA-dependent RNA polymerase, Defense response to virus (Os12t0197500-01);Similar to Protein SUPPRESSOR OF GENE SILENCING 3 homolog. (Os12t0197500-02);Similar to Protein SUPPRESSOR OF GENE SILENCING 3 homolog. (Os12t0197500-03)","12",319,{"v":37877.7,"d":"37877.700"},{"v":7.01566,"d":"7.016"},{"v":-1.12978,"d":"-1.130"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G23570.1"]
["Os12t0236900-01","Rice","SET domain containing protein. (Os12t0236900-01)","12",509,{"v":56528.9,"d":"56528.900"},{"v":5.27932,"d":"5.279"},{"v":-0.191945,"d":"-0.192"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G14260.2"]
["Os12t0293000-02","Rice","Hypothetical conserved gene. (Os12t0293000-01);Conserved hypothetical protein. (Os12t0293000-02)","12",82,{"v":9763.03,"d":"9763.030"},{"v":7.6723,"d":"7.672"},{"v":0.168293,"d":"0.168"},"extracellular","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","cytosol","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT1G07570.1"]
["Os12t0517100-01","Rice","F-box protein 658Cyclin-like F-box domain containing protein. (Os12t0517100-01)","12",501,{"v":56126,"d":"56126.000"},{"v":5.34385,"d":"5.344"},{"v":0.0419162,"d":"0.042"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G80570.3"]
["Os12t0539700-04","Rice","Conserved hypothetical protein. (Os12t0539700-01);Conserved hypothetical protein. (Os12t0539700-02);Conserved hypothetical protein. (Os12t0539700-03);Similar to OSIGBa0135L04.2 protein. (Os12t0539700-04)","12",74,{"v":8072.52,"d":"8072.520"},{"v":4.9338,"d":"4.934"},{"v":-0.358108,"d":"-0.358"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G33360.2"]
["Os12t0540900-02","Rice","Similar to Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). (Os12t0540900-01);Similar to tryptophanyl-tRNA synthetase. (Os12t0540900-02)","12",328,{"v":37589,"d":"37589.000"},{"v":6.85521,"d":"6.855"},{"v":-0.224085,"d":"-0.224"},"cytosol","mitochondrion,cytosol,extracellular,nucleus","nucleus",null,"extracellular",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G04600.3"]
["Os12t0578400-01","Rice","Glycoside hydrolase family 79, N-terminal protein. (Os12t0578400-01)","12",539,{"v":59541.9,"d":"59541.900"},{"v":6.17957,"d":"6.180"},{"v":-0.172171,"d":"-0.172"},"plasma membrane,vacuole,golgi","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"golgi","cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","plasma membrane",null,null,"AT5G07830.1"]
["Os12t0582000-00","Rice","Similar to Cytochrome P450 family protein. (Os12t0582000-00)","12",541,{"v":57951.2,"d":"57951.200"},{"v":6.95887,"d":"6.959"},{"v":0.122181,"d":"0.122"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plasma membrane",null,null,"AT4G37340.1"]
["Os12t0607000-02","Rice","Similar to homocysteine S-methyltransferase-2. (Os12t0607000-01);Similar to Homocysteine S-methyltransferase 2 (EC 2.1.1.10) (S- methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S- methyltransferase 2) (ZmHMT-2). (Os12t0607000-02)","12",342,{"v":36829.6,"d":"36829.600"},{"v":5.01817,"d":"5.018"},{"v":-0.101462,"d":"-0.101"},"cytosol","mitochondrion,cytosol,plastid","cytosol",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G63250.1"]
["Os12t0628400-02","Rice","FATTY ACID 2-HYDROXYLASE 1Fatty acid 2-hydroxylase, Resistance to rice blast fungus infection (Os12t0628400-01);Fatty acid hydroxylase domain containing protein. (Os12t0628400-02)","12",238,{"v":27388.3,"d":"27388.300"},{"v":7.77136,"d":"7.771"},{"v":0.0596639,"d":"0.060"},"cytosol","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT2G34770.1"]
["Os01t0136100-01","Rice","16.9 KDA CLASS I HEAT SHOCK PROTEIN 116.9 kDa class I heat shock protein 1. (Os01t0136100-01)","1",150,{"v":16940,"d":"16940.000"},{"v":6.55856,"d":"6.559"},{"v":-0.604667,"d":"-0.605"},"cytosol,plastid,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol","msms:nucleus:26035336,msms:plastid:27992503","26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT2G29500.1"]
["Os01t0165200-02","Rice","Kelch-type beta propeller domain containing protein. (Os01t0165200-01);Similar to KEAP1. (Os01t0165200-02)","1",170,{"v":18860.7,"d":"18860.700"},{"v":6.22836,"d":"6.228"},{"v":-0.178824,"d":"-0.179"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G01660.1"]
["Os01t0174100-01","Rice","Conserved hypothetical protein. (Os01t0174100-01)","1",111,{"v":12388.7,"d":"12388.700"},{"v":11.2483,"d":"11.248"},{"v":-0.795496,"d":"-0.795"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G80180.1"]
["Os01t0226500-01","Rice","Conserved hypothetical protein. (Os01t0226500-01);Similar to predicted protein. (Os01t0226500-02)","1",435,{"v":49725,"d":"49725.000"},{"v":7.2943,"d":"7.294"},{"v":-1.01839,"d":"-1.018"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","nucleus","nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","nucleus",null,null,"AT2G46200.2"]
["Os01t0226500-02","Rice","Conserved hypothetical protein. (Os01t0226500-01);Similar to predicted protein. (Os01t0226500-02)","1",192,{"v":22149.3,"d":"22149.300"},{"v":10.1954,"d":"10.195"},{"v":-0.954167,"d":"-0.954"},"nucleus","cytosol,peroxisome,plastid,nucleus","nucleus",null,"cytosol",null,"nucleus","nucleus",null,"plastid","peroxisome","plastid",null,"nucleus",null,null,"AT2G46200.2"]
["Os01t0229900-01","Rice","Similar to Ubiquitin-conjugating enzyme family protein, expressed. (Os01t0229900-01);Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-) (ASK-dzeta). (Os01t0229900-02);Hypothetical conserved gene. (Os01t0229900-03)","1",272,{"v":30191.8,"d":"30191.800"},{"v":8.84223,"d":"8.842"},{"v":-0.292647,"d":"-0.293"},"mitochondrion","mitochondrion,nucleus,cytosol,plasma membrane,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","plasma membrane",null,null,"AT3G15355.1"]
["Os01t0231000-01","Rice","IAA3Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0231000-01);Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0231000-02);Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0231000-03)","1",263,{"v":28226.5,"d":"28226.500"},{"v":6.88865,"d":"6.889"},{"v":-0.603042,"d":"-0.603"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT2G22670.1"]
["Os01t0232700-02","Rice","HDHSimilar to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH). Splice isoform 2. (Os01t0232700-01);Similar to Histidinol dehydrogenase. (Os01t0232700-02)","1",250,{"v":26756.8,"d":"26756.800"},{"v":4.55087,"d":"4.551"},{"v":0.0704,"d":"0.070"},"cytosol,plastid","mitochondrion,cytosol,plastid","cytosol",null,"cytosol","plastid","cytosol","plastid",null,"mitochondrion",{"$nulls":3},"plastid",null,null,"AT5G63890.2"]
["Os01t0328700-01","Rice","FAD-dependent pyridine nucleotide-disulphide oxidoreductase domain containing protein. (Os01t0328700-01)","1",503,{"v":52646.1,"d":"52646.100"},{"v":7.60945,"d":"7.609"},{"v":0.12505,"d":"0.125"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion,cytosol","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:mitochondrion:12746528,msms:mitochondrion:15276442,msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:23159799,msms:mitochondrion:23356873,msms:plasma membrane:27800704,msms:plastid:27992503","15276442:Brian K:BK:Kristensen,Per:P:Askerlund,Natalia V:NV:Bykova,Helge:H:Egsgaard,Ian M:IM:Møller:2004,23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,12746528:Joshua L:JL:Heazlewood,Katharine A:KA:Howell,James:J:Whelan,A Harvey:AH:Millar:2003,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,23356873:Shaobai:S:Huang,Richard P:RP:Jacoby,Rachel N:RN:Shingaki-Wells,Lei:L:Li,A Harvey:AH:Millar:2013,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G48030.4"]
["Os01t0508000-01","Rice","BETA-GLUCOSIDASE 1Similar to Beta-glucosidase. (Os01t0508000-01);Similar to Beta-mannosidase 2. (Os01t0508000-02)","1",516,{"v":58003.8,"d":"58003.800"},{"v":8.43661,"d":"8.437"},{"v":-0.256008,"d":"-0.256"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","endoplasmic reticulum","msms:extracellular:19038476,msms:cytosol:19685898,msms:plastid:27992503","19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT3G18080.1"]
["Os01t0670800-01","Rice","auxin response factor-2, auxin response factor 2, OsETTIN2Similar to Auxin response factor 2. (Os01t0670800-01);Ortholog of Arabidopsis ETTIN, Awn development (Os01t0670800-02)","1",631,{"v":69981.5,"d":"69981.500"},{"v":8.07557,"d":"8.076"},{"v":-0.518384,"d":"-0.518"},"nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT2G33860.1"]
["Os01t0705300-01","Rice","Similar to PDE225/PTAC7. (Os01t0705300-01);Similar to predicted protein. (Os01t0705300-02)","1",183,{"v":20683.9,"d":"20683.900"},{"v":10.3507,"d":"10.351"},{"v":-0.744809,"d":"-0.745"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G24314.1"]
["Os01t0705300-02","Rice","Similar to PDE225/PTAC7. (Os01t0705300-01);Similar to predicted protein. (Os01t0705300-02)","1",112,{"v":13273.1,"d":"13273.100"},{"v":6.53458,"d":"6.535"},{"v":-0.534821,"d":"-0.535"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT5G24314.1"]
["Os01t0715400-01","Rice","OsSTA30Hypothetical conserved gene. (Os01t0715400-01);Conserved hypothetical protein. (Os01t0715400-02);Glycoside hydrolase, subgroup, catalytic domain domain containing protein. (Os01t0715400-03)","1",349,{"v":38268.6,"d":"38268.600"},{"v":7.06531,"d":"7.065"},{"v":-0.367622,"d":"-0.368"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT1G69830.1"]
["Os01t0746000-00","Rice","Similar to Phosphoenolpyruvate carboxylase. (Os01t0746000-00)","1",126,{"v":13262.9,"d":"13262.900"},{"v":11.8577,"d":"11.858"},{"v":-0.509524,"d":"-0.510"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","cytosol",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G68750.1"]
["Os01t0770500-01","Rice","ABC TRANSPORTER I FAMILY MEMBER 6Similar to ABC transporter ATP-binding protein. (Os01t0770500-01);Similar to ABC transporter ATP-binding protein. (Os01t0770500-02)","1",273,{"v":29593.9,"d":"29593.900"},{"v":9.37967,"d":"9.380"},{"v":-0.0432234,"d":"-0.043"},"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","plastid","cytosol,plastid","plastid","plastid",null,"plastid","plastid","mitochondrion",null,null,"AT4G33460.1"]
["Os01t0788800-01","Rice","TRANSCRIPTION FACTOR 1Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-01);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-02);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-03)","1",629,{"v":69497.7,"d":"69497.700"},{"v":7.96167,"d":"7.962"},{"v":-0.156439,"d":"-0.156"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT4G04890.1"]
["Os01t0819100-01","Rice","Similar to predicted protein. (Os01t0819100-01)","1",359,{"v":39702.6,"d":"39702.600"},{"v":7.57258,"d":"7.573"},{"v":-0.37688,"d":"-0.377"},"cytosol,plasma membrane,extracellular","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"cytosol","msms:extracellular:19226311,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT3G08680.1"]
["Os01t0857200-01","Rice","Di-trans-poly-cis-decaprenylcistransferase family protein. (Os01t0857200-01)","1",295,{"v":32889.1,"d":"32889.100"},{"v":8.38058,"d":"8.381"},{"v":-0.325085,"d":"-0.325"},"plastid","mitochondrion,nucleus,endoplasmic reticulum,cytosol,plastid","plastid",null,"nucleus","mitochondrion","cytosol","endoplasmic reticulum,plastid",null,"plastid",null,"plastid","plastid","plastid",null,null,"AT5G58770.1"]
["Os01t0859400-01","Rice","Protein phosphatase 16Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-01);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-02);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-03)","1",259,{"v":29063.4,"d":"29063.400"},{"v":9.20925,"d":"9.209"},{"v":0.112741,"d":"0.113"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G56610.1"]
["Os01t0883800-02","Rice","SEMIDWARF 1Similar to GA C20oxidase2. (Os01t0883800-01);GA 20-oxidase2, GA metabolism (Os01t0883800-02)","1",389,{"v":42515.4,"d":"42515.400"},{"v":6.0095,"d":"6.010"},{"v":-0.248072,"d":"-0.248"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G25420.1"]
["Os01t0918200-01","Rice","Similar to Ubiquitin-like protein SMT3. (Os01t0918200-01)","1",101,{"v":11009,"d":"11009.000"},{"v":4.87867,"d":"4.879"},{"v":-0.720792,"d":"-0.721"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT4G26840.1"]
["Os01t0929000-01","Rice","Similar to aminopeptidase. (Os01t0929000-01)","1",488,{"v":57022.3,"d":"57022.300"},{"v":5.75757,"d":"5.758"},{"v":-0.290984,"d":"-0.291"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"plasma membrane","cytosol",null,null,"AT3G19340.1"]
["Os01t0953400-01","Rice","NB-ARC domain containing protein. (Os01t0953400-01)","1",600,{"v":67572.1,"d":"67572.100"},{"v":5.26442,"d":"5.264"},{"v":-0.3075,"d":"-0.308"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT5G45500.9"]
["Os02t0143100-01","Rice","SPP2Similar to Sucrose-phosphatase (EC 3.1.3.24). (Os02t0143100-01)","2",423,{"v":47257.2,"d":"47257.200"},{"v":5.62368,"d":"5.624"},{"v":-0.34279,"d":"-0.343"},"plasma membrane","cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome",null,null,"peroxisome","peroxisome",null,"peroxisome","cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G35840.1"]
["Os02t0173100-04","Rice","P-450 97B4Similar to cytochrome P450. (Os02t0173100-01);Similar to cytochrome P450. (Os02t0173100-02);Similar to Cytochrome P450 97B3 (EC 1.14.-.-). (Os02t0173100-03);Similar to cDNA clone:J013071M18, full insert sequence. (Os02t0173100-04)","2",338,{"v":38629.2,"d":"38629.200"},{"v":5.78594,"d":"5.786"},{"v":-0.35503,"d":"-0.355"},"cytosol","mitochondrion,cytosol,endoplasmic reticulum,nucleus","nucleus",{"$nulls":3},"cytosol","endoplasmic reticulum",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G15110.1"]
["Os02t0177900-01","Rice","Carbohydrate kinase, FGGY domain containing protein. (Os02t0177900-01);Carbohydrate kinase, FGGY family protein. (Os02t0177900-02)","2",372,{"v":39997.9,"d":"39997.900"},{"v":6.41168,"d":"6.412"},{"v":-0.0155914,"d":"-0.016"},"cytosol","mitochondrion,cytosol,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT4G30310.2"]
["Os02t0195500-01","Rice","Protein of unknown function DUF1680 family protein. (Os02t0195500-01);Similar to predicted protein. (Os02t0195500-02);Similar to catalytic. (Os02t0195500-03)","2",891,{"v":97033.6,"d":"97033.600"},{"v":6.0232,"d":"6.023"},{"v":-0.137823,"d":"-0.138"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014","AT5G12960.1"]
["Os02t0195500-03","Rice","Protein of unknown function DUF1680 family protein. (Os02t0195500-01);Similar to predicted protein. (Os02t0195500-02);Similar to catalytic. (Os02t0195500-03)","2",565,{"v":61886.9,"d":"61886.900"},{"v":5.61642,"d":"5.616"},{"v":-0.166372,"d":"-0.166"},"peroxisome,vacuole,nucleus","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane,extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","vacuole",null,null,"AT5G12960.1"]
["Os02t0461100-01","Rice","Conserved hypothetical protein. (Os02t0461100-01)","2",97,{"v":10500.7,"d":"10500.700"},{"v":10.9397,"d":"10.940"},{"v":-0.234021,"d":"-0.234"},"plastid","plastid,nucleus","nucleus",{"$nulls":3},"plastid","nucleus","plastid","plastid",null,"plastid","nucleus","plastid",null,null,"AT3G47580.1"]
["Os02t0518800-01","Rice","Conserved hypothetical protein. (Os02t0518800-01)","2",142,{"v":15786.1,"d":"15786.100"},{"v":12.5046,"d":"12.505"},{"v":-0.710563,"d":"-0.711"},"mitochondrion,plastid,nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT2G26580.1"]
["Os02t0570300-00","Rice","Hypothetical gene. (Os02t0570300-00)","2",121,{"v":13961.7,"d":"13961.700"},{"v":8.25132,"d":"8.251"},{"v":-0.650413,"d":"-0.650"},"cytosol","mitochondrion,cytosol,vacuole,nucleus","nucleus",null,"vacuole",null,"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G11000.4"]
["Os02t0623500-01","Rice","Lysyl-tRNA synthetase, class II domain containing protein. (Os02t0623500-01);Similar to Lysyl-tRNA synthetase. (Os02t0623500-02)","2",586,{"v":65836.3,"d":"65836.300"},{"v":6.75688,"d":"6.757"},{"v":-0.443345,"d":"-0.443"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus","mitochondrion","mitochondrion","cytosol","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G13490.1"]
["Os02t0643500-01","Rice","Pentapeptide repeat containing protein. (Os02t0643500-01)","2",277,{"v":28962.1,"d":"28962.100"},{"v":8.88341,"d":"8.883"},{"v":-0.209386,"d":"-0.209"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G12250.2"]
["Os02t0666200-02","Rice","PLASMA MEMBRANE INTRINSIC PROTEIN 1AAquaporin. (Os02t0666200-01);Aquaporin. (Os02t0666200-02)","2",289,{"v":30761.4,"d":"30761.400"},{"v":9.06001,"d":"9.060"},{"v":0.373702,"d":"0.374"},"plasma membrane,cytosol,peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",null,"plastid",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","peroxisome",null,null,"AT4G00430.1"]
["Os02t0708400-01","Rice","Tetratricopeptide-like helical domain containing protein. (Os02t0708400-01)","2",711,{"v":76956.5,"d":"76956.500"},{"v":4.89025,"d":"4.890"},{"v":-0.469058,"d":"-0.469"},"plasma membrane","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol","msms:plasma membrane:27800704,msms:plasma membrane:28056797","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,28056797:Ning:N:Yang,Tai:T:Wang:2017","AT3G27960.3"]
["Os02t0716500-01","Rice","fatty acid desaturase 2, microsomal delta-12 fatty acid desaturase, microsomal Delta12-fatty acid desaturase 2-1Delta12-fatty acid desaturase (Os02t0716500-01);Hypothetical protein. (Os02t0716500-03);Similar to Delta-12 fatty acid desaturase. (Os02t0716500-04)","2",388,{"v":44352.4,"d":"44352.400"},{"v":8.23066,"d":"8.231"},{"v":0.000257732,"d":"0.000"},"plasma membrane,peroxisome,plastid","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,"vacuole",null,"peroxisome","endoplasmic reticulum",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plasma membrane","plastid",null,null,"AT3G12120.2"]
["Os02t0770600-02","Rice","Protein of unknown function DUF1644 family protein. (Os02t0770600-01);Protein of unknown function DUF1644 family protein. (Os02t0770600-02)","2",360,{"v":40832.4,"d":"40832.400"},{"v":8.10656,"d":"8.107"},{"v":-0.767222,"d":"-0.767"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","plastid","nucleus","nucleus","plastid","mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT1G68140.1"]
["Os02t0790600-02","Rice","Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-01);Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os02t0790600-02)","2",428,{"v":45724.2,"d":"45724.200"},{"v":7.04156,"d":"7.042"},{"v":-0.175701,"d":"-0.176"},"endoplasmic reticulum,plastid,golgi","nucleus,endoplasmic reticulum,plastid,golgi","nucleus",null,null,"plastid","endoplasmic reticulum","nucleus",null,"plastid",null,null,"plastid","golgi",null,null,"AT2G18650.1"]
["Os02t0829600-01","Rice","Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0829600-01);Similar to Sperm protamine P1 (Po1) [Contains: Sperm protamine P2 (Po2) (Main protamine)]. (Os02t0829600-02)","2",522,{"v":56261.1,"d":"56261.100"},{"v":7.11947,"d":"7.119"},{"v":-0.111494,"d":"-0.111"},"plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"mitochondrion","plastid","plastid",null,null,"AT3G19895.1"]
["Os03t0123300-01","Rice","TILLERING AND DWARF 1Activator of the anaphase promoting complex/cyclosome (APC/C) complex, Regulation of cell cycle, Regulation of postembryonic shoot branching and tillering, Maintenance of endoreduplication during endosperm development (Os03t0123300-01);Similar to Cell cycle switch protein CCS52A. (Os03t0123300-02)","3",523,{"v":56042.6,"d":"56042.600"},{"v":9.4436,"d":"9.444"},{"v":-0.332696,"d":"-0.333"},"plastid","cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol","nucleus",null,"plastid",null,"plastid","plastid","nucleus",null,null,"AT4G22910.1"]
["Os03t0170400-01","Rice","RECEPTOR-LIKE CYTOPLASMIC KINASE 102Similar to serine/threonine-protein kinase NAK. (Os03t0170400-01);Similar to serine/threonine-protein kinase NAK. (Os03t0170400-02)","3",247,{"v":27314.6,"d":"27314.600"},{"v":9.14717,"d":"9.147"},{"v":-0.351822,"d":"-0.352"},"plastid","cytosol,plastid,nucleus","plastid",null,"cytosol",null,"cytosol","nucleus",null,"plastid",null,"plastid","nucleus","plastid",null,null,"AT1G14370.1"]
["Os03t0170900-02","Rice","SUCROSE TRANSPORTER 1Sucrose transporter. (Os03t0170900-01);Similar to Sucrose transporter. (Os03t0170900-02)","3",284,{"v":30113.3,"d":"30113.300"},{"v":9.31209,"d":"9.312"},{"v":0.638732,"d":"0.639"},"plasma membrane,extracellular","extracellular,endoplasmic reticulum,peroxisome,golgi,vacuole,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plasma membrane",null,null,"AT2G02860.1"]
["Os03t0184000-00","Rice","PHYTOENE DESATURASESimilar to Phytoene desaturase (Fragment). (Os03t0184000-00)","3",578,{"v":64773.3,"d":"64773.300"},{"v":7.96058,"d":"7.961"},{"v":-0.190657,"d":"-0.191"},"plastid","plastid","plastid",null,"plastid","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT4G14210.2"]
["Os03t0195900-01","Rice","Hypothetical protein. (Os03t0195900-01);Hypothetical protein. (Os03t0195900-02)","3",114,{"v":12094.5,"d":"12094.500"},{"v":11.7422,"d":"11.742"},{"v":-0.289474,"d":"-0.289"},"plastid","mitochondrion,plastid","plastid",null,null,"mitochondrion","plastid","plastid",null,"mitochondrion",null,"plastid",null,"mitochondrion",null,null,"AT3G61690.2"]
["Os03t0198900-02","Rice","TagIHypothetical conserved gene. (Os03t0198900-01);Methyladenine glycosylase domain containing protein. (Os03t0198900-02)","3",417,{"v":46988.1,"d":"46988.100"},{"v":10.5174,"d":"10.517"},{"v":-0.66211,"d":"-0.662"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"plastid","mitochondrion","nucleus",null,null,"AT1G75090.1"]
["Os03t0214200-02","Rice","Mediator of OsbZIP46 deactivation and degradationMediator of OsbZIP46 deactivation and degradation, Negative regulation of ABA signaling and drought tolerance (Os03t0214200-01);Similar to Ninja-family protein 1. (Os03t0214200-02)","3",331,{"v":34808.1,"d":"34808.100"},{"v":10.3221,"d":"10.322"},{"v":-0.606344,"d":"-0.606"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G69260.1"]
["Os03t0251700-00","Rice","Similar to Protein kinase domain containing protein, expressed. (Os03t0251700-00)","3",676,{"v":72341.9,"d":"72341.900"},{"v":9.91906,"d":"9.919"},{"v":-0.410799,"d":"-0.411"},"plastid","mitochondrion,plasma membrane,nucleus,cytosol,vacuole,peroxisome,plastid","nucleus",{"$nulls":3},"vacuole","nucleus,cytosol,peroxisome,plasma membrane,plastid",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT2G45590.1"]
["Os03t0272900-02","Rice","DVL family protein. (Os03t0272900-02)","3",98,{"v":10571.6,"d":"10571.600"},{"v":11.1145,"d":"11.115"},{"v":-0.529592,"d":"-0.530"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT2G39705.1"]
["Os03t0638200-02","Rice","Similar to Major facilitator superfamily protein, expressed. (Os03t0638200-01);Similar to Transporter-like protein. (Os03t0638200-02)","3",480,{"v":52595.7,"d":"52595.700"},{"v":5.23076,"d":"5.231"},{"v":0.631875,"d":"0.632"},"plasma membrane,peroxisome,vacuole","plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome","nucleus",{"$nulls":3},"peroxisome","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"vacuole","plasma membrane",null,null,"AT3G13050.3"]
["Os03t0745400-01","Rice","Conserved hypothetical protein. (Os03t0745400-01);Hypothetical conserved gene. (Os03t0745400-02)","3",121,{"v":12614.6,"d":"12614.600"},{"v":4.80101,"d":"4.801"},{"v":-0.445455,"d":"-0.445"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G18260.1"]
["Os03t0745400-02","Rice","Conserved hypothetical protein. (Os03t0745400-01);Hypothetical conserved gene. (Os03t0745400-02)","3",151,{"v":15762.5,"d":"15762.500"},{"v":5.1307,"d":"5.131"},{"v":-0.11457,"d":"-0.115"},"mitochondrion,cytosol,plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"mitochondrion",null,"plastid",null,null,"AT2G46920.1"]
["Os03t0758400-02","Rice","Ankyrin repeat containing protein. (Os03t0758400-01);Ankyrin repeat domain containing protein. (Os03t0758400-02)","3",82,{"v":8673.33,"d":"8673.330"},{"v":8.24773,"d":"8.248"},{"v":-0.103659,"d":"-0.104"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","mitochondrion","cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G03430.1"]
["Os03t0800500-02","Rice","Putative small multi-drug export family protein. (Os03t0800500-01);Putative small multi-drug export family protein. (Os03t0800500-02)","3",322,{"v":33650.8,"d":"33650.800"},{"v":10.9699,"d":"10.970"},{"v":0.626708,"d":"0.627"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G02590.1"]
["Os03t0842700-01","Rice","Similar to predicted protein. (Os03t0842700-01);Vacuolar sorting protein 9 domain containing protein. (Os03t0842700-02);Similar to predicted protein. (Os03t0842700-03);Conserved hypothetical protein. (Os03t0842700-04)","3",88,{"v":9738.3,"d":"9738.300"},{"v":4.38445,"d":"4.384"},{"v":-0.417045,"d":"-0.417"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G19770.1"]
["Os03t0842700-03","Rice","Similar to predicted protein. (Os03t0842700-01);Vacuolar sorting protein 9 domain containing protein. (Os03t0842700-02);Similar to predicted protein. (Os03t0842700-03);Conserved hypothetical protein. (Os03t0842700-04)","3",145,{"v":16428.4,"d":"16428.400"},{"v":5.2276,"d":"5.228"},{"v":-0.387586,"d":"-0.388"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G19770.1"]
["Os04t0103700-01","Rice","Serine/threonine protein kinase-related domain containing protein. (Os04t0103700-01)","4",813,{"v":90717.9,"d":"90717.900"},{"v":6.57934,"d":"6.579"},{"v":-0.169619,"d":"-0.170"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus","plasma membrane",null,null,"AT1G65800.1"]
["Os04t0208800-01","Rice","Hypothetical protein. (Os04t0208800-01)","4",105,{"v":11839.9,"d":"11839.900"},{"v":11.7881,"d":"11.788"},{"v":-0.131429,"d":"-0.131"},"mitochondrion","mitochondrion,nucleus,cytosol,golgi,plastid","nucleus",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","golgi",null,null,"AT5G50160.2"]
["Os04t0266400-02","Rice","Similar to AHM2 (Fragment). (Os04t0266400-01);Similar to cDNA clone:001-201-C01, full insert sequence. (Os04t0266400-02)","4",568,{"v":63538.7,"d":"63538.700"},{"v":8.78884,"d":"8.789"},{"v":-0.723592,"d":"-0.724"},"plastid,nucleus","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","nucleus","mitochondrion","plastid",null,"plastid","plastid","nucleus",null,null,"AT5G52230.2"]
["Os04t0278000-01","Rice","Similar to PRLI-interacting factor G (Fragment). (Os04t0278000-01)","4",527,{"v":58400.5,"d":"58400.500"},{"v":5.79083,"d":"5.791"},{"v":-0.288235,"d":"-0.288"},"mitochondrion,plastid","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","plastid","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT2G13690.1"]
["Os04t0340800-01","Rice","Conserved hypothetical protein. (Os04t0340800-01);Conserved hypothetical protein. (Os04t0340800-02)","4",89,{"v":10138.5,"d":"10138.500"},{"v":10.2582,"d":"10.258"},{"v":-0.561798,"d":"-0.562"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","golgi",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","cytosol",null,null,"AT3G15240.2"]
["Os04t0413000-00","Rice","ABC TRANSPORTER B FAMILY MEMBER 27Similar to OSIGBa0134P10.6 protein. (Os04t0413000-00)","4",638,{"v":68396.9,"d":"68396.900"},{"v":8.25464,"d":"8.255"},{"v":0.174295,"d":"0.174"},"plasma membrane,cytosol,peroxisome","mitochondrion,plasma membrane,nucleus,cytosol,peroxisome","nucleus",{"$nulls":3},"cytosol","cytosol,plasma membrane",null,"mitochondrion","peroxisome",null,"plasma membrane","peroxisome",null,null,"AT5G03910.1"]
["Os04t0488000-01","Rice","CYCLIN-DEPENDENT KINASE G;2Similar to PITSLRE serine/threonine-protein kinase CDC2L1 (EC 2.7.1.37) (Galactosyltransferase associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1). (Os04t0488000-01);Similar to PITSLRE serine/threonine-protein kinase CDC2L1 (EC 2.7.1.37) (Galactosyltransferase associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1). (Os04t0488000-02);Hypothetical gene. (Os04t0488000-03)","4",710,{"v":79887,"d":"79887.000"},{"v":6.5253,"d":"6.525"},{"v":-0.852253,"d":"-0.852"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G67580.2"]
["Os04t0488000-03","Rice","CYCLIN-DEPENDENT KINASE G;2Similar to PITSLRE serine/threonine-protein kinase CDC2L1 (EC 2.7.1.37) (Galactosyltransferase associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1). (Os04t0488000-01);Similar to PITSLRE serine/threonine-protein kinase CDC2L1 (EC 2.7.1.37) (Galactosyltransferase associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 1). (Os04t0488000-02);Hypothetical gene. (Os04t0488000-03)","4",100,{"v":11353.8,"d":"11353.800"},{"v":7.58556,"d":"7.586"},0.509,"cytosol,endoplasmic reticulum,vacuole","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","vacuole",null,null,"AT5G15940.4"]
["Os04t0503500-02","Rice","Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-01);Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-02)","4",581,{"v":63262.9,"d":"63262.900"},{"v":7.35355,"d":"7.354"},{"v":0.0442341,"d":"0.044"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G15740.1"]
["Os04t0527000-01","Rice","GRAM domain containing protein. (Os04t0527000-01)","4",215,{"v":23638.5,"d":"23638.500"},{"v":10.3297,"d":"10.330"},{"v":-0.251628,"d":"-0.252"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G08350.1"]
["Os04t0537900-01","Rice","GLUTELIN PRECURSOR 3Seed-type vacuolar processing enzyme (VPE), Glutelin maturation (Os04t0537900-01)","4",497,{"v":54888.7,"d":"54888.700"},{"v":4.92653,"d":"4.927"},{"v":-0.367606,"d":"-0.368"},"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","vacuole","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT1G62710.1"]
["Os04t0547900-01","Rice","Anti-sense to fibroblast growth factor protein GFG family protein. (Os04t0547900-01)","4",368,{"v":40968.6,"d":"40968.600"},{"v":6.23523,"d":"6.235"},{"v":-0.206522,"d":"-0.207"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","plastid","plastid","mitochondrion",null,"plastid","cytosol","plastid",null,null,"AT5G47240.1"]
["Os04t0550500-01","Rice","N-acetylglutamate kinase 1, N-acetyl glutamate kinase 1Similar to N-acetyl glutamate kinase 2. (Os04t0550500-01);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-02);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-03);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-05)","4",343,{"v":35176,"d":"35176.000"},{"v":7.60209,"d":"7.602"},{"v":0.378717,"d":"0.379"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G57560.1"]
["Os04t0550500-02","Rice","N-acetylglutamate kinase 1, N-acetyl glutamate kinase 1Similar to N-acetyl glutamate kinase 2. (Os04t0550500-01);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-02);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-03);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-05)","4",343,{"v":35176,"d":"35176.000"},{"v":7.60209,"d":"7.602"},{"v":0.378717,"d":"0.379"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT3G57560.1"]
["Os04t0550500-03","Rice","N-acetylglutamate kinase 1, N-acetyl glutamate kinase 1Similar to N-acetyl glutamate kinase 2. (Os04t0550500-01);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-02);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-03);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-05)","4",343,{"v":35176,"d":"35176.000"},{"v":7.60209,"d":"7.602"},{"v":0.378717,"d":"0.379"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G57560.1"]
["Os04t0550500-05","Rice","N-acetylglutamate kinase 1, N-acetyl glutamate kinase 1Similar to N-acetyl glutamate kinase 2. (Os04t0550500-01);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-02);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-03);Similar to N-acetyl glutamate kinase 2. (Os04t0550500-05)","4",343,{"v":35176,"d":"35176.000"},{"v":7.60209,"d":"7.602"},{"v":0.378717,"d":"0.379"},"plastid","cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","plastid","cytosol","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT3G57560.1"]
["Os04t0577300-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 58Similar to GDSL-motif lipase/hydrolase-like protein. (Os04t0577300-01)","4",430,{"v":46928.7,"d":"46928.700"},{"v":9.96612,"d":"9.966"},{"v":-0.336977,"d":"-0.337"},"nucleus","mitochondrion,extracellular,plastid,nucleus","plastid",{"$nulls":3},"nucleus","extracellular",null,"mitochondrion",null,"mitochondrion",null,"nucleus",null,null,"AT5G41890.1"]
["Os04t0601500-00","Rice","Similar to B0403H10-OSIGBa0105A11.11 protein. (Os04t0601500-00)","4",198,{"v":22320.8,"d":"22320.800"},{"v":10.0594,"d":"10.059"},{"v":0.168687,"d":"0.169"},"mitochondrion,peroxisome,plasma membrane,plastid","mitochondrion,plasma membrane,nucleus,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","plasma membrane",null,null,"AT1G64850.1"]
["Os04t0604900-01","Rice","XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 16Similar to Xyloglucan endotransglycosylase (Fragment). (Os04t0604900-01)","4",321,{"v":34796.4,"d":"34796.400"},{"v":4.60746,"d":"4.607"},{"v":-0.245483,"d":"-0.245"},"extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular",null,null,"AT5G57540.1"]
["Os04t0611800-00","Rice","ENT-KAURENE SYNTHASE 1Terpenoid synthase domain containing protein. (Os04t0611800-00)","4",756,{"v":85964.1,"d":"85964.100"},{"v":5.69445,"d":"5.694"},{"v":-0.219841,"d":"-0.220"},"cytosol","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"mitochondrion","plasma membrane","cytosol",null,null,"AT1G79460.1"]
["Os04t0615550-00","Rice","Hypothetical gene. (Os04t0615550-00)","4",134,{"v":15552.9,"d":"15552.900"},{"v":8.36352,"d":"8.364"},{"v":-0.0440299,"d":"-0.044"},"cytosol,extracellular,plastid","mitochondrion,extracellular,nucleus,cytosol,plastid","plastid",null,"extracellular",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"plastid","extracellular",null,null,"AT1G22210.1"]
["Os04t0617200-01","Rice","Conserved hypothetical protein. (Os04t0617200-01)","4",149,{"v":15096.3,"d":"15096.300"},{"v":10.4025,"d":"10.403"},{"v":-0.0590604,"d":"-0.059"},"vacuole,cytosol,plastid","extracellular,nucleus,cytosol,vacuole,plastid","nucleus",null,null,"plastid","cytosol","extracellular",null,"plastid",null,"plastid",null,"vacuole"]
["Os04t0668000-01","Rice","Conserved hypothetical protein. (Os04t0668000-01)","4",106,{"v":11205.3,"d":"11205.300"},{"v":11.7655,"d":"11.766"},{"v":-0.617925,"d":"-0.618"},"mitochondrion","mitochondrion,nucleus","nucleus",{"$nulls":3},"mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT4G33970.1"]
["Os04t0682500-01","Rice","Peptidase T2, asparaginase 2 domain containing protein. (Os04t0682500-01)","4",445,{"v":45186.3,"d":"45186.300"},{"v":5.65034,"d":"5.650"},{"v":-0.0597753,"d":"-0.060"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","peroxisome,plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G00590.1"]
["Os04t0690932-01","Rice","Hypothetical gene. (Os04t0690932-01)","4",116,{"v":12715.3,"d":"12715.300"},{"v":13.0529,"d":"13.053"},-1.075,"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","plastid",null,"mitochondrion",null,"plastid",null,"nucleus",null,null,"AT2G25950.1"]
["Os04t0692200-01","Rice","YOUNG SEEDLING STRIPE1Chloroplast nucleoid-associated protein, Chloroplast development, Regulator of plastid-encoded plastid RNA polymerase (PEP) activity (Os04t0692200-01);Non-protein coding transcript. (Os04t0692200-02)","4",319,{"v":35180.6,"d":"35180.600"},{"v":4.58748,"d":"4.587"},{"v":-0.377429,"d":"-0.377"},"plastid","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","plastid","mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT4G33480.1"]
["Os05t0100016-00","Rice","Hypothetical conserved gene. (Os05t0100016-00)","5",214,{"v":22170.4,"d":"22170.400"},{"v":11.4011,"d":"11.401"},{"v":-0.261682,"d":"-0.262"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","nucleus",null,"plastid",null,"plastid",null,"plastid",null,null,"AT1G22850.2"]
["Os05t0101600-01","Rice","Cytochrome P450 family protein. (Os05t0101600-01)","5",518,{"v":58611.2,"d":"58611.200"},{"v":9.79336,"d":"9.793"},{"v":-0.119884,"d":"-0.120"},"plasma membrane,endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","plasma membrane",null,null,"AT1G19630.1"]
["Os05t0102800-01","Rice","ML3Similar to AML1. (Os05t0102800-01);Similar to AML1. (Os05t0102800-02);Similar to AML1. (Os05t0102800-03);Similar to AML6. (Os05t0102800-04)","5",955,{"v":104528,"d":"104528.000"},{"v":6.46391,"d":"6.464"},{"v":-0.573403,"d":"-0.573"},"nucleus","plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus","plastid","plastid",null,null,"nucleus","nucleus",null,null,"AT5G07290.1"]
["Os05t0102800-02","Rice","ML3Similar to AML1. (Os05t0102800-01);Similar to AML1. (Os05t0102800-02);Similar to AML1. (Os05t0102800-03);Similar to AML6. (Os05t0102800-04)","5",955,{"v":104528,"d":"104528.000"},{"v":6.46391,"d":"6.464"},{"v":-0.573403,"d":"-0.573"},"nucleus","plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus","plastid","plastid",null,null,"nucleus","nucleus",null,null,"AT5G07290.1"]
["Os05t0102800-03","Rice","ML3Similar to AML1. (Os05t0102800-01);Similar to AML1. (Os05t0102800-02);Similar to AML1. (Os05t0102800-03);Similar to AML6. (Os05t0102800-04)","5",955,{"v":104528,"d":"104528.000"},{"v":6.46391,"d":"6.464"},{"v":-0.573403,"d":"-0.573"},"nucleus","plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus","plastid","plastid",null,null,"nucleus","nucleus",null,null,"AT5G07290.1"]
["Os05t0102800-04","Rice","ML3Similar to AML1. (Os05t0102800-01);Similar to AML1. (Os05t0102800-02);Similar to AML1. (Os05t0102800-03);Similar to AML6. (Os05t0102800-04)","5",716,{"v":79140.7,"d":"79140.700"},{"v":8.42198,"d":"8.422"},{"v":-0.63338,"d":"-0.633"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G07290.1"]
["Os05t0104200-01","Rice","POLYGALACTURONASE-INHIBITING PROTEIN 1, POLYGALACTURONASE-INHIBITING PROTEIN 2Polygalacturonase inhibiting protein, Inhibitor of fungal polygalacturonase, Sheath blight resistance (Os05t0104200-01)","5",309,{"v":32755.6,"d":"32755.600"},{"v":7.40464,"d":"7.405"},{"v":0.183172,"d":"0.183"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","cytosol",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular","msms:extracellular:17951457,msms:extracellular:18372294,msms:extracellular:19226311,msms:extracellular:24083427,msms:extracellular:25047395","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,17951457:Jinming:J:Zhu,Sophie:S:Alvarez,Ellen L:EL:Marsh,Mary E:ME:Lenoble,In-Jeong:IJ:Cho,Mayandi:M:Sivaguru,Sixue:S:Chen,Henry T:HT:Nguyen,Yajun:Y:Wu,Daniel P:DP:Schachtman,Robert E:RE:Sharp:2007,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,18372294:Toshihiko:T:Aki,Mikao:M:Shigyo,Ryouhei:R:Nakano,Tadakatsu:T:Yoneyama,Shuichi:S:Yanagisawa:2008,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT5G06860.1"]
["Os05t0129000-01","Rice","gamma-glutamylcysteine synthetaseSimilar to Gamma-glutamylcysteine synthetase (Fragment). (Os05t0129000-01);Similar to cDNA clone:J033125H02, full insert sequence. (Os05t0129000-02)","5",492,{"v":55726,"d":"55726.000"},{"v":6.40441,"d":"6.404"},{"v":-0.358333,"d":"-0.358"},"plastid","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G23100.1"]
["Os05t0129000-02","Rice","gamma-glutamylcysteine synthetaseSimilar to Gamma-glutamylcysteine synthetase (Fragment). (Os05t0129000-01);Similar to cDNA clone:J033125H02, full insert sequence. (Os05t0129000-02)","5",87,{"v":10170.3,"d":"10170.300"},{"v":8.92695,"d":"8.927"},{"v":-0.503448,"d":"-0.503"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT4G23100.1"]
["Os05t0141300-00","Rice","Transferase family protein. (Os05t0141300-00)","5",444,{"v":47456,"d":"47456.000"},{"v":5.13065,"d":"5.131"},{"v":0.00495496,"d":"0.005"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,"mitochondrion","cytosol","cytosol",null,null,"AT5G17540.1"]
["Os05t0193800-01","Rice","Conserved hypothetical protein. (Os05t0193800-01);Similar to cDNA clone:001-006-A02, full insert sequence. (Os05t0193800-02)","5",81,{"v":9189.72,"d":"9189.720"},{"v":8.47575,"d":"8.476"},{"v":-0.388889,"d":"-0.389"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"cytosol",null,null,"AT5G26810.1"]
["Os05t0193800-02","Rice","Conserved hypothetical protein. (Os05t0193800-01);Similar to cDNA clone:001-006-A02, full insert sequence. (Os05t0193800-02)","5",182,{"v":20060.1,"d":"20060.100"},{"v":9.49104,"d":"9.491"},{"v":-0.103297,"d":"-0.103"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G14440.1"]
["Os05t0200100-01","Rice","Similar to Thioredoxin-like 6. (Os05t0200100-01);Similar to Thioredoxin-like 6. (Os05t0200100-02)","5",216,{"v":23800.6,"d":"23800.600"},{"v":8.96124,"d":"8.961"},{"v":-0.331019,"d":"-0.331"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G29670.1"]
["Os05t0200100-02","Rice","Similar to Thioredoxin-like 6. (Os05t0200100-01);Similar to Thioredoxin-like 6. (Os05t0200100-02)","5",216,{"v":23800.6,"d":"23800.600"},{"v":8.96124,"d":"8.961"},{"v":-0.331019,"d":"-0.331"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G29670.1"]
["Os05t0266900-01","Rice","Hypothetical protein. (Os05t0266900-01)","5",82,{"v":9632.71,"d":"9632.710"},{"v":9.57572,"d":"9.576"},{"v":-0.85122,"d":"-0.851"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","cytosol",null,null,"AT5G58480.1"]
["Os05t0345175-01","Rice","Similar to patellin-5. (Os05t0345175-01)","5",79,{"v":8736.29,"d":"8736.290"},{"v":8.4455,"d":"8.446"},{"v":-0.411392,"d":"-0.411"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G51670.1"]
["Os05t0376300-01","Rice","Similar to cDNA, clone: J065201C14, full insert sequence. (Os05t0376300-01);Non-protein coding transcript. (Os05t0376300-02);Hypothetical gene. (Os05t0376300-03);DNA-repair protein, UmuC-like domain containing protein. (Os05t0376300-04)","5",79,{"v":8943.21,"d":"8943.210"},{"v":11.3437,"d":"11.344"},{"v":0.122785,"d":"0.123"},"mitochondrion,cytosol,golgi","mitochondrion,cytosol,plastid,golgi","plastid",{"$nulls":3},"golgi","plastid",null,"mitochondrion",null,null,"cytosol","mitochondrion",null,null,"AT3G18970.1"]
["Os05t0376300-03","Rice","Similar to cDNA, clone: J065201C14, full insert sequence. (Os05t0376300-01);Non-protein coding transcript. (Os05t0376300-02);Hypothetical gene. (Os05t0376300-03);DNA-repair protein, UmuC-like domain containing protein. (Os05t0376300-04)","5",148,{"v":15418,"d":"15418.000"},{"v":5.86338,"d":"5.863"},{"v":-0.450676,"d":"-0.451"},"nucleus","mitochondrion,plasma membrane,plastid,nucleus","nucleus",null,"plastid",null,"mitochondrion","plasma membrane",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G07130.2"]
["Os05t0376300-04","Rice","Similar to cDNA, clone: J065201C14, full insert sequence. (Os05t0376300-01);Non-protein coding transcript. (Os05t0376300-02);Hypothetical gene. (Os05t0376300-03);DNA-repair protein, UmuC-like domain containing protein. (Os05t0376300-04)","5",326,{"v":36486.7,"d":"36486.700"},{"v":9.01357,"d":"9.014"},{"v":-0.578528,"d":"-0.579"},"nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",null,"peroxisome",null,"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT4G31400.1"]
["Os05t0406000-01","Rice","Conserved hypothetical protein. (Os05t0406000-01)","5",174,{"v":19535.3,"d":"19535.300"},{"v":7.25914,"d":"7.259"},{"v":-0.850575,"d":"-0.851"},"plasma membrane","cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT4G15545.1"]
["Os05t0438600-01","Rice","Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase domain containing protein. (Os05t0438600-01)","5",123,{"v":13523.6,"d":"13523.600"},{"v":4.23178,"d":"4.232"},{"v":0.50813,"d":"0.508"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"extracellular","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G43670.1"]
["Os05t0457300-00","Rice","Hypothetical gene. (Os05t0457300-00)","5",149,{"v":16309.6,"d":"16309.600"},{"v":11.1295,"d":"11.130"},{"v":-0.62953,"d":"-0.630"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus","plastid","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G04260.1"]
["Os05t0461350-00","Rice","Hypothetical gene. (Os05t0461350-00)","5",86,{"v":9383.2,"d":"9383.200"},{"v":4.76533,"d":"4.765"},{"v":0.252326,"d":"0.252"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT3G26380.2"]
["Os05t0491200-01","Rice","b-subunit of SnRK1, beta-subunit of SnRK1Similar to SNF1 kinase complex anchoring protein (Fragment). (Os05t0491200-01);Similar to SNF1 kinase complex anchoring protein (Fragment). (Os05t0491200-02)","5",290,{"v":31417.9,"d":"31417.900"},{"v":5.15768,"d":"5.158"},{"v":-0.395172,"d":"-0.395"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G21170.1"]
["Os05t0491200-02","Rice","b-subunit of SnRK1, beta-subunit of SnRK1Similar to SNF1 kinase complex anchoring protein (Fragment). (Os05t0491200-01);Similar to SNF1 kinase complex anchoring protein (Fragment). (Os05t0491200-02)","5",290,{"v":31417.9,"d":"31417.900"},{"v":5.15768,"d":"5.158"},{"v":-0.395172,"d":"-0.395"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G21170.1"]
["Os05t0527800-01","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os05t0527800-01);Similar to Anthocyanidin 5,3-O-glucosyltransferase. (Os05t0527800-02)","5",478,{"v":52947.7,"d":"52947.700"},{"v":6.41901,"d":"6.419"},{"v":-0.106276,"d":"-0.106"},"plasma membrane","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","cytosol",{"$nulls":3},"peroxisome","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G16520.1"]
["Os05t0527800-02","Rice","UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os05t0527800-01);Similar to Anthocyanidin 5,3-O-glucosyltransferase. (Os05t0527800-02)","5",306,{"v":33752.3,"d":"33752.300"},{"v":6.34991,"d":"6.350"},{"v":-0.252288,"d":"-0.252"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,"plastid",null,"cytosol",null,null,"AT3G16520.1"]
["Os05t0533600-01","Rice","SOLUBLE STARCH SYNTHASE IVBStarch synthase, Starch biosynthesis (Os05t0533600-01);Starch synthase, Starch biosynthesis (Os05t0533600-02)","5",915,{"v":104184,"d":"104184.000"},{"v":6.42205,"d":"6.422"},{"v":-0.402404,"d":"-0.402"},"plastid","mitochondrion,cytosol,plastid","plastid",null,"plastid","plastid","cytosol",null,"plastid","mitochondrion",null,"plastid","plastid","plastid","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G18240.1"]
["Os05t0533600-02","Rice","SOLUBLE STARCH SYNTHASE IVBStarch synthase, Starch biosynthesis (Os05t0533600-01);Starch synthase, Starch biosynthesis (Os05t0533600-02)","5",919,{"v":104275,"d":"104275.000"},{"v":6.20545,"d":"6.205"},{"v":-0.354625,"d":"-0.355"},"plastid","mitochondrion,cytosol,plastid","plastid","plastid",null,"plastid","cytosol",null,"plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT4G18240.1"]
["Os05t0542300-01","Rice","Conserved hypothetical protein. (Os05t0542300-01)","5",85,{"v":9478.32,"d":"9478.320"},{"v":10.0668,"d":"10.067"},{"v":-0.511765,"d":"-0.512"},"endoplasmic reticulum,extracellular,vacuole","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","extracellular",null,null,"AT5G53486.2"]
["Os05t0566700-01","Rice","Similar to Homeobox protein B-H1 (Homeobox BarH1 protein). (Os05t0566700-01)","5",120,{"v":13472.3,"d":"13472.300"},{"v":10.5715,"d":"10.572"},{"v":-0.459167,"d":"-0.459"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT1G26540.1"]
["Os05t0571400-01","Rice","Protein of unknown function DUF3593 domain containing protein. (Os05t0571400-01);Hypothetical conserved gene. (Os05t0571400-02)","5",169,{"v":18313.4,"d":"18313.400"},{"v":10.3393,"d":"10.339"},{"v":0.0887574,"d":"0.089"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","mitochondrion","mitochondrion,extracellular,golgi,plasma membrane,plastid","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G64355.1"]
["Os05t0571400-02","Rice","Protein of unknown function DUF3593 domain containing protein. (Os05t0571400-01);Hypothetical conserved gene. (Os05t0571400-02)","5",346,{"v":38019.3,"d":"38019.300"},{"v":12.5295,"d":"12.530"},{"v":-0.489595,"d":"-0.490"},"nucleus","cytosol,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"plastid",null,"plastid","cytosol","nucleus",null,null,"AT2G35330.2"]
["Os05t0582300-01","Rice","sucrose phosphate synthase 2Similar to prenyl transferase. (Os05t0582300-01)","5",315,{"v":34312.4,"d":"34312.400"},{"v":5.75449,"d":"5.754"},{"v":0.131429,"d":"0.131"},"mitochondrion","mitochondrion,plastid","plastid",null,"plastid","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT1G17050.1"]
["Os06t0104000-01","Rice","Protein of unknown function DUF3754 domain containing protein. (Os06t0104000-01)","6",718,{"v":80849.3,"d":"80849.300"},{"v":8.30503,"d":"8.305"},{"v":-0.208078,"d":"-0.208"},"mitochondrion,plastid","mitochondrion,vacuole,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","plastid",null,"plastid","plastid","vacuole",null,null,"AT2G46915.1"]
["Os06t0118800-00","Rice","Conserved hypothetical protein. (Os06t0118800-00)","6",241,{"v":25942.2,"d":"25942.200"},{"v":9.08555,"d":"9.086"},{"v":0.046888,"d":"0.047"},"plasma membrane","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","extracellular","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plastid","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT2G41100.3"]
["Os06t0137600-01","Rice","K homology-like, alpha/beta domain containing protein. (Os06t0137600-01);K homology-like, alpha/beta domain containing protein. (Os06t0137600-02)","6",209,{"v":23496.2,"d":"23496.200"},{"v":4.78106,"d":"4.781"},{"v":-0.519139,"d":"-0.519"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","plastid","mitochondrion","plastid","mitochondrion","plastid",null,"plastid","plastid","plastid",null,null,"AT4G34730.2"]
["Os06t0137600-02","Rice","K homology-like, alpha/beta domain containing protein. (Os06t0137600-01);K homology-like, alpha/beta domain containing protein. (Os06t0137600-02)","6",209,{"v":23496.2,"d":"23496.200"},{"v":4.78106,"d":"4.781"},{"v":-0.519139,"d":"-0.519"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"nucleus","plastid","mitochondrion","plastid","mitochondrion","plastid",null,"plastid","plastid","plastid",null,null,"AT4G34730.2"]
["Os06t0146200-02","Rice","Conserved hypothetical protein. (Os06t0146200-02)","6",38,{"v":3949.91,"d":"3949.910"},{"v":6.2803,"d":"6.280"},{"v":0.634211,"d":"0.634"},"mitochondrion,cytosol,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","mitochondrion,nucleus,cytosol,vacuole,golgi,plasma membrane,plastid",null,"mitochondrion",null,"mitochondrion",null,"vacuole",null,null,"AT2G39480.2"]
["Os06t0208800-01","Rice","lysin motif-containing protein 6, lysin motif (LysM)-containing protein 6, LysM-containing protein 6Lysin motif-containing protein, Pattern recognition receptor, Peptidoglycan and chitin perception in innate immunity (Os06t0208800-01)","6",409,{"v":40506.1,"d":"40506.100"},{"v":4.51278,"d":"4.513"},{"v":0.367726,"d":"0.368"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","extracellular","msms:plasma membrane:18260611,msms:extracellular:19038476,msms:extracellular:19226311,msms:extracellular:25047395,msms:extracellular:26194822,msms:plastid:27992503","25047395:Jin Yeong:JY:Kim,Jingni:J:Wu,Soon Jae:SJ:Kwon,Haram:H:Oh,So Eui:SE:Lee,Sang Gon:SG:Kim,Yiming:Y:Wang,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Il-Pyung:IP:Ahn,Beom-Gi:BG:Kim,Sun Tae:ST:Kim:2014,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008,26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015,19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT1G21880.2"]
["Os06t0232200-00","Rice","Similar to Fructokinase-2. (Os06t0232200-00)","6",397,{"v":42251.6,"d":"42251.600"},{"v":6.62551,"d":"6.626"},{"v":0.0120907,"d":"0.012"},"plastid","extracellular,plastid","plastid",null,"extracellular","plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G66430.1"]
["Os06t0237502-00","Rice","Similar to EMB2004. (Os06t0237502-00)","6",614,{"v":65737.2,"d":"65737.200"},{"v":7.65723,"d":"7.657"},{"v":-0.124919,"d":"-0.125"},"plastid","mitochondrion,plasma membrane,plastid,nucleus","plastid",null,null,"plastid","plastid","plasma membrane,nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:21433289,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT1G10510.1"]
["Os06t0267500-01","Rice","Similar to NAM1 protein (Fragment). (Os06t0267500-01)","6",246,{"v":27517.6,"d":"27517.600"},{"v":3.89428,"d":"3.894"},{"v":-0.746341,"d":"-0.746"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G25580.1"]
["Os06t0283400-01","Rice","Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os06t0283400-01)","6",700,{"v":77109.5,"d":"77109.500"},{"v":5.58669,"d":"5.587"},{"v":-0.385571,"d":"-0.386"},"plastid","plastid,nucleus","nucleus",{"$nulls":3},"plastid","nucleus","plastid","plastid",null,"plastid","nucleus","nucleus",null,null,"AT2G03890.1"]
["Os06t0334600-01","Rice","Hypothetical protein. (Os06t0334600-01)","6",104,{"v":11857.6,"d":"11857.600"},11.243,{"v":-0.0692308,"d":"-0.069"},"mitochondrion","mitochondrion,peroxisome,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion,peroxisome,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT2G39725.2"]
["Os06t0351500-01","Rice","GDSL ESTERASE/LIPASE PROTEIN 83Lipase, GDSL domain containing protein. (Os06t0351500-01)","6",378,{"v":41787.1,"d":"41787.100"},{"v":5.40818,"d":"5.408"},{"v":-0.0642857,"d":"-0.064"},"mitochondrion,endoplasmic reticulum,plastid,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,golgi,plastid","plastid",null,"nucleus","plastid","endoplasmic reticulum","extracellular",null,"mitochondrion",null,"mitochondrion","plastid","golgi",null,null,"AT1G75880.2"]
["Os06t0352900-01","Rice","Conserved hypothetical protein. (Os06t0352900-01);Hypothetical conserved gene. (Os06t0352900-02)","6",845,{"v":90641.1,"d":"90641.100"},{"v":4.97739,"d":"4.977"},{"v":-0.770651,"d":"-0.771"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT3G15095.1"]
["Os06t0352900-02","Rice","Conserved hypothetical protein. (Os06t0352900-01);Hypothetical conserved gene. (Os06t0352900-02)","6",384,{"v":42517.5,"d":"42517.500"},{"v":5.83213,"d":"5.832"},{"v":-0.890365,"d":"-0.890"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G15095.1"]
["Os06t0472400-01","Rice","Similar to Transcriptional regulator. (Os06t0472400-01);Similar to predicted protein. (Os06t0472400-02)","6",743,{"v":79551.1,"d":"79551.100"},{"v":5.43374,"d":"5.434"},{"v":0.0896366,"d":"0.090"},"plasma membrane","mitochondrion,nucleus,endoplasmic reticulum,cytosol,peroxisome,plastid","cytosol",null,"nucleus",null,"peroxisome","endoplasmic reticulum,plastid",null,"mitochondrion",null,null,"plastid","cytosol","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT5G66420.2"]
["Os06t0472400-02","Rice","Similar to Transcriptional regulator. (Os06t0472400-01);Similar to predicted protein. (Os06t0472400-02)","6",194,{"v":20091.3,"d":"20091.300"},{"v":5.17989,"d":"5.180"},{"v":0.394845,"d":"0.395"},"plasma membrane","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus",null,"cytosol","plasma membrane",null,"mitochondrion",null,null,"cytosol","peroxisome","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G66420.2"]
["Os06t0498400-01","Rice","Similar to Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (Starch-related R1 protein). (Os06t0498400-01);Similar to Alpha-glucan water dikinase (Fragment). (Os06t0498400-02)","6",{"v":1414,"d":"1,414"},{"v":158005,"d":"158005.000"},{"v":5.15921,"d":"5.159"},{"v":-0.382107,"d":"-0.382"},"mitochondrion","mitochondrion,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G10760.2"]
["Os06t0498400-02","Rice","Similar to Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (Starch-related R1 protein). (Os06t0498400-01);Similar to Alpha-glucan water dikinase (Fragment). (Os06t0498400-02)","6",45,{"v":4889.85,"d":"4889.850"},{"v":7.53478,"d":"7.535"},{"v":-0.3,"d":"-0.300"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G10760.2"]
["Os06t0499500-01","Rice","GH3-7Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)","6",620,{"v":69024.2,"d":"69024.200"},{"v":5.21803,"d":"5.218"},{"v":-0.157097,"d":"-0.157"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G28130.1"]
["Os06t0499500-02","Rice","GH3-7Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)","6",445,{"v":49157.7,"d":"49157.700"},{"v":5.07882,"d":"5.079"},{"v":-0.108989,"d":"-0.109"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G28130.1"]
["Os06t0499500-03","Rice","GH3-7Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-01);Similar to GH3.17; indole-3-acetic acid amido synthetase. (Os06t0499500-02);Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 17) (AtGH3-17). (Os06t0499500-03)","6",620,{"v":69024.2,"d":"69024.200"},{"v":5.21803,"d":"5.218"},{"v":-0.157097,"d":"-0.157"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G28130.1"]
["Os06t0500300-00","Rice","Conserved hypothetical protein. (Os06t0500300-00)","6",262,{"v":28118.3,"d":"28118.300"},{"v":9.86126,"d":"9.861"},{"v":-0.533969,"d":"-0.534"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT1G06330.1"]
["Os06t0537700-01","Rice","X8 domain containing protein. (Os06t0537700-01)","6",186,{"v":18423.6,"d":"18423.600"},{"v":4.35327,"d":"4.353"},{"v":0.366667,"d":"0.367"},"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","msms:extracellular:19226311","19226311:Won Kyong:WK:Cho,Xiong Yan:XY:Chen,Hyosub:H:Chu,Yeonggil:Y:Rim,Suwha:S:Kim,Sun Tae:ST:Kim,Seon-Won:SW:Kim,Zee-Yong:ZY:Park,Jae-Yean:JY:Kim:2009","AT3G58100.2"]
["Os06t0544100-01","Rice","Tyrosine protein kinase domain containing protein. (Os06t0544100-01)","6",683,{"v":72206.6,"d":"72206.600"},{"v":8.42818,"d":"8.428"},{"v":-0.0633968,"d":"-0.063"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","plasma membrane","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G45800.1"]
["Os06t0568600-01","Rice","ENT-KAURENE OXIDASE 5Similar to Ent-kaurene oxidase 1 (Fragment). (Os06t0568600-01)","6",503,{"v":56162.6,"d":"56162.600"},{"v":6.72095,"d":"6.721"},{"v":-0.142744,"d":"-0.143"},"cytosol","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","peroxisome",null,null,"AT5G25900.1"]
["Os06t0594100-01","Rice","Crotonase, core domain containing protein. (Os06t0594100-01);Similar to predicted protein. (Os06t0594100-02)","6",434,{"v":46886.2,"d":"46886.200"},{"v":6.93299,"d":"6.933"},{"v":-0.106452,"d":"-0.106"},"mitochondrion","mitochondrion,cytosol,peroxisome,plastid","plastid",null,"cytosol","mitochondrion","mitochondrion","peroxisome","mitochondrion","plastid",null,"plastid","plastid","mitochondrion","msms:mitochondrion:19010998,msms:mitochondrion:23027867,msms:extracellular:23159799,msms:plastid:27992503","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,23159799:Sang Gon:SG:Kim,Yiming:Y:Wang,Kyung Hee:KH:Lee,Zee-Yong:ZY:Park,Jongsun:J:Park,Jingni:J:Wu,Soon Jae:SJ:Kwon,Yong-Hwan:YH:Lee,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Sun Tae:ST:Kim,Kyu Young:KY:Kang:2013,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT4G13360.1"]
["Os06t0594100-02","Rice","Crotonase, core domain containing protein. (Os06t0594100-01);Similar to predicted protein. (Os06t0594100-02)","6",87,{"v":8873.92,"d":"8873.920"},{"v":6.49815,"d":"6.498"},{"v":0.550575,"d":"0.551"},"plasma membrane","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,"mitochondrion",null,"endoplasmic reticulum","mitochondrion,plasma membrane,golgi,peroxisome,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","extracellular","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT3G24360.4"]
["Os06t0608000-01","Rice","Similar to PGPS/D10. (Os06t0608000-01)","6",123,{"v":12523.4,"d":"12523.400"},{"v":10.7141,"d":"10.714"},{"v":-0.204878,"d":"-0.205"},"mitochondrion","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",null,"nucleus","mitochondrion","cytosol","plasma membrane",null,"mitochondrion",null,null,"mitochondrion","mitochondrion",null,null,"AT5G55980.1"]
["Os06t0608600-01","Rice","SFT2-like family protein. (Os06t0608600-01);SFT2-like family protein. (Os06t0608600-02)","6",231,{"v":24372.6,"d":"24372.600"},{"v":8.87409,"d":"8.874"},{"v":0.582251,"d":"0.582"},"plasma membrane","cytosol,plasma membrane,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plasma membrane",null,"plastid",null,"plastid","plasma membrane","plasma membrane",null,null,"AT4G26550.1"]
["Os06t0608600-02","Rice","SFT2-like family protein. (Os06t0608600-01);SFT2-like family protein. (Os06t0608600-02)","6",231,{"v":24372.6,"d":"24372.600"},{"v":8.87409,"d":"8.874"},{"v":0.582251,"d":"0.582"},"plasma membrane","cytosol,plasma membrane,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plasma membrane",null,"plastid",null,"plastid","plasma membrane","plasma membrane",null,null,"AT4G26550.1"]
["Os06t0623300-01","Rice","NAD(P)-binding domain containing protein. (Os06t0623300-01)","6",321,{"v":35245.9,"d":"35245.900"},{"v":5.78332,"d":"5.783"},{"v":-0.115265,"d":"-0.115"},"mitochondrion,plastid","mitochondrion,cytosol,plastid,golgi","plastid",null,null,"mitochondrion","cytosol","golgi","mitochondrion","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT2G33590.1"]
["Os06t0638100-01","Rice","Similar to Tic21. (Os06t0638100-01);Similar to Tic21. (Os06t0638100-02)","6",287,{"v":29653.1,"d":"29653.100"},{"v":11.3927,"d":"11.393"},{"v":0.284669,"d":"0.285"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","mitochondrion","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT2G15290.1"]
["Os06t0638100-02","Rice","Similar to Tic21. (Os06t0638100-01);Similar to Tic21. (Os06t0638100-02)","6",141,{"v":14750.2,"d":"14750.200"},{"v":11.1842,"d":"11.184"},{"v":0.46383,"d":"0.464"},"endoplasmic reticulum,extracellular,plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid",null,"extracellular",null,null,"AT2G15290.1"]
["Os06t0639500-01","Rice","Protein kinase, core domain containing protein. (Os06t0639500-01)","6",630,{"v":70966.7,"d":"70966.700"},{"v":6.51269,"d":"6.513"},{"v":-0.328254,"d":"-0.328"},"plastid","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","cytosol",null,"mitochondrion",null,null,"nucleus","nucleus","msms:plastid:21433289","21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT4G32250.3"]
["Os06t0648200-01","Rice","Conserved hypothetical protein. (Os06t0648200-01);Hypothetical protein. (Os06t0648200-02);Hypothetical conserved gene. (Os06t0648200-03);Hypothetical conserved gene. (Os06t0648200-04);Hypothetical conserved gene. (Os06t0648200-05)","6",60,{"v":6832.42,"d":"6832.420"},{"v":5.64486,"d":"5.645"},{"v":-0.181667,"d":"-0.182"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","extracellular","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT4G32450.1"]
["Os06t0648200-02","Rice","Conserved hypothetical protein. (Os06t0648200-01);Hypothetical protein. (Os06t0648200-02);Hypothetical conserved gene. (Os06t0648200-03);Hypothetical conserved gene. (Os06t0648200-04);Hypothetical conserved gene. (Os06t0648200-05)","6",182,{"v":19823.1,"d":"19823.100"},{"v":12.2666,"d":"12.267"},{"v":-0.397253,"d":"-0.397"},"mitochondrion","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",null,"cytosol","mitochondrion","peroxisome","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","mitochondrion"]
["Os06t0648200-03","Rice","Conserved hypothetical protein. (Os06t0648200-01);Hypothetical protein. (Os06t0648200-02);Hypothetical conserved gene. (Os06t0648200-03);Hypothetical conserved gene. (Os06t0648200-04);Hypothetical conserved gene. (Os06t0648200-05)","6",85,{"v":8722.38,"d":"8722.380"},{"v":6.56741,"d":"6.567"},{"v":-0.0694118,"d":"-0.069"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","extracellular"]
["Os06t0648200-04","Rice","Conserved hypothetical protein. (Os06t0648200-01);Hypothetical protein. (Os06t0648200-02);Hypothetical conserved gene. (Os06t0648200-03);Hypothetical conserved gene. (Os06t0648200-04);Hypothetical conserved gene. (Os06t0648200-05)","6",61,{"v":6432.73,"d":"6432.730"},{"v":4.16512,"d":"4.165"},{"v":0.298361,"d":"0.298"},"cytosol,extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular",null,null,"AT5G49340.1"]
["Os06t0648200-05","Rice","Conserved hypothetical protein. (Os06t0648200-01);Hypothetical protein. (Os06t0648200-02);Hypothetical conserved gene. (Os06t0648200-03);Hypothetical conserved gene. (Os06t0648200-04);Hypothetical conserved gene. (Os06t0648200-05)","6",61,{"v":6432.73,"d":"6432.730"},{"v":4.16512,"d":"4.165"},{"v":0.298361,"d":"0.298"},"cytosol,extracellular","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","extracellular",null,null,"AT5G49340.1"]
["Os06t0661400-01","Rice","OsSTA175Similar to clathrin assembly protein. (Os06t0661400-01)","6",250,{"v":28474.6,"d":"28474.600"},{"v":9.42153,"d":"9.422"},{"v":-0.1532,"d":"-0.153"},"cytosol","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","plastid","mitochondrion","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G14910.1"]
["Os06t0662200-01","Rice","RICE SEED B-ZIPPER 5Basic leucine zipper (bZIP) transcription factor, Negative regulator of cold and drought stress response (Os06t0662200-01)","6",295,{"v":31927.5,"d":"31927.500"},{"v":7.22145,"d":"7.221"},{"v":-0.637288,"d":"-0.637"},"nucleus","mitochondrion,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","gfp:nucleus:22189955","22189955:Citao:C:Liu,Yanbin:Y:Wu,Xiping:X:Wang:2012","AT5G24800.1"]
["Os06t0687450-01","Rice","Similar to dehydration-responsive protein-related. (Os06t0687450-01)","6",601,{"v":68231.8,"d":"68231.800"},{"v":9.37783,"d":"9.378"},{"v":-0.292013,"d":"-0.292"},"endoplasmic reticulum,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","golgi",null,null,"AT5G14430.1"]
["Os06t0694500-01","Rice","IRON-SULFUR CLUSTER PROTEIN 13Similar to Nitrogen fixation like protein. (Os06t0694500-01)","6",219,{"v":23249.3,"d":"23249.300"},{"v":7.06024,"d":"7.060"},{"v":0.0593607,"d":"0.059"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"plastid","plastid","mitochondrion",null,null,"AT4G25910.1"]
["Os06t0727300-00","Rice","Similar to glycosyltransferase, family GT8. (Os06t0727300-00)","6",504,{"v":58808.2,"d":"58808.200"},{"v":7.96672,"d":"7.967"},{"v":-0.471627,"d":"-0.472"},"mitochondrion","mitochondrion,cytosol,golgi,peroxisome,plastid","plastid",null,"golgi",null,"cytosol","plastid",null,"mitochondrion",null,"mitochondrion","mitochondrion","peroxisome",null,null,"AT4G38270.2"]
["Os07t0172600-00","Rice","Pentatricopeptide repeat domain containing protein. (Os07t0172600-00)","7",872,{"v":94872.4,"d":"94872.400"},{"v":7.7216,"d":"7.722"},{"v":-0.0322248,"d":"-0.032"},"plastid","plastid,nucleus","plastid",null,null,"plastid","nucleus","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G03800.1"]
["Os07t0182400-01","Rice","IAA24AUX/IAA protein family protein. (Os07t0182400-01)","7",219,{"v":23048.1,"d":"23048.100"},{"v":7.76884,"d":"7.769"},{"v":-0.439726,"d":"-0.440"},"plastid","vacuole,plastid,nucleus","plastid",null,"vacuole",null,"nucleus","nucleus","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT1G04240.1"]
["Os07t0227200-01","Rice","Conserved hypothetical protein. (Os07t0227200-01)","7",171,{"v":19056.3,"d":"19056.300"},10.802,{"v":-0.0695906,"d":"-0.070"},"mitochondrion","mitochondrion,plasma membrane,plastid","plastid",null,null,"mitochondrion","mitochondrion","mitochondrion","mitochondrion","mitochondrion",null,"mitochondrion","plastid","plasma membrane",null,null,"AT5G28180.1"]
["Os07t0247100-01","Rice","LESION AND LAMINA BENDINGChloroplast-localised putative leucine carboxyl methyltransferase (LCMT), Regulation of jasmonate (JA)- and brassinosteroid (BR)-mediated growth and defence responses (Os07t0247100-01)","7",357,{"v":39830.4,"d":"39830.400"},{"v":4.85747,"d":"4.857"},{"v":-0.235574,"d":"-0.236"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"plastid","cytosol","plastid","mitochondrion","plastid",null,"mitochondrion","plastid","mitochondrion",null,null,"AT4G02405.1"]
["Os07t0411200-01","Rice","RING finger protein OsRFPH2-13, RING-H2 protein 13Similar to Anaphase promoting complex subunit 11 (APC11) (Cyclosome subunit 11) (Hepatocellular carcinoma associated RING finger protein). (Os07t0411200-01)","7",84,{"v":9676.7,"d":"9676.700"},{"v":7.62652,"d":"7.627"},{"v":-0.213095,"d":"-0.213"},"mitochondrion,cytosol,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol","nucleus",null,"mitochondrion",null,null,"mitochondrion","vacuole",null,null,"AT3G05870.6"]
["Os07t0461600-01","Rice","Hypothetical conserved gene. (Os07t0461600-01);Similar to TA7 protein (Fragment). (Os07t0461600-02);Similar to TA7 protein (Fragment). (Os07t0461600-03)","7",363,{"v":42127.3,"d":"42127.300"},{"v":9.76913,"d":"9.769"},{"v":-0.750413,"d":"-0.750"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT5G13950.1"]
["Os07t0461600-02","Rice","Hypothetical conserved gene. (Os07t0461600-01);Similar to TA7 protein (Fragment). (Os07t0461600-02);Similar to TA7 protein (Fragment). (Os07t0461600-03)","7",542,{"v":59890.5,"d":"59890.500"},{"v":4.70745,"d":"4.707"},{"v":-0.80572,"d":"-0.806"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G39120.1"]
["Os07t0461600-03","Rice","Hypothetical conserved gene. (Os07t0461600-01);Similar to TA7 protein (Fragment). (Os07t0461600-02);Similar to TA7 protein (Fragment). (Os07t0461600-03)","7",542,{"v":59890.5,"d":"59890.500"},{"v":4.70745,"d":"4.707"},{"v":-0.80572,"d":"-0.806"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G39120.1"]
["Os07t0479100-01","Rice","RING finger protein OsRFPH2-17, RING-H2 protein 17Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0479100-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0479100-02)","7",249,{"v":26314.5,"d":"26314.500"},{"v":6.36821,"d":"6.368"},{"v":0.361044,"d":"0.361"},"plastid","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","nucleus","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","plastid","plasma membrane",null,null,"AT2G17730.1"]
["Os07t0479100-02","Rice","RING finger protein OsRFPH2-17, RING-H2 protein 17Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0479100-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0479100-02)","7",203,{"v":22089.6,"d":"22089.600"},{"v":6.60763,"d":"6.608"},{"v":0.294581,"d":"0.295"},"plasma membrane,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,null,"AT2G17730.1"]
["Os07t0481000-01","Rice","Similar to Pollen-specific kinase partner protein. (Os07t0481000-01);Similar to MYND finger family protein. (Os07t0481000-02);Hypothetical gene. (Os07t0481000-03)","7",380,{"v":42325,"d":"42325.000"},{"v":7.39311,"d":"7.393"},{"v":-0.0594737,"d":"-0.059"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","nucleus",null,null,"AT1G70150.1"]
["Os07t0481000-02","Rice","Similar to Pollen-specific kinase partner protein. (Os07t0481000-01);Similar to MYND finger family protein. (Os07t0481000-02);Hypothetical gene. (Os07t0481000-03)","7",351,{"v":39122.1,"d":"39122.100"},{"v":7.42359,"d":"7.424"},{"v":-0.0991453,"d":"-0.099"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G70150.1"]
["Os07t0481000-03","Rice","Similar to Pollen-specific kinase partner protein. (Os07t0481000-01);Similar to MYND finger family protein. (Os07t0481000-02);Hypothetical gene. (Os07t0481000-03)","7",141,{"v":16291.8,"d":"16291.800"},11.513,{"v":-0.0886525,"d":"-0.089"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus","plastid","cytosol","nucleus",null,"mitochondrion",null,null,"plastid","plastid",null,null,"AT5G17720.1"]
["Os07t0507200-01","Rice","Cell cycle regulated microtubule associated protein domain containing protein. (Os07t0507200-01)","7",477,{"v":52484.1,"d":"52484.100"},{"v":8.0536,"d":"8.054"},{"v":-0.597694,"d":"-0.598"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G03780.3"]
["Os07t0516900-01","Rice","Similar to RNA Binding Protein 45. (Os07t0516900-01);Similar to RNA Binding Protein 45. (Os07t0516900-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0516900-03)","7",251,{"v":27615.3,"d":"27615.300"},{"v":6.80608,"d":"6.806"},{"v":-0.716733,"d":"-0.717"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","nucleus","plastid",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G11650.1"]
["Os07t0516900-02","Rice","Similar to RNA Binding Protein 45. (Os07t0516900-01);Similar to RNA Binding Protein 45. (Os07t0516900-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0516900-03)","7",92,{"v":10099.9,"d":"10099.900"},{"v":10.2277,"d":"10.228"},{"v":-0.715217,"d":"-0.715"},"cytosol,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion",null,"nucleus","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT1G11650.1"]
["Os07t0516900-03","Rice","Similar to RNA Binding Protein 45. (Os07t0516900-01);Similar to RNA Binding Protein 45. (Os07t0516900-02);Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0516900-03)","7",175,{"v":19743.5,"d":"19743.500"},{"v":4.76759,"d":"4.768"},{"v":-0.970857,"d":"-0.971"},"endoplasmic reticulum,extracellular,vacuole","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"nucleus","mitochondrion","endoplasmic reticulum","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","vacuole",null,null,"AT5G54900.1"]
["Os07t0540200-01","Rice","Similar to OSIGBa0116M22.12 protein. (Os07t0540200-01)","7",292,{"v":30481.3,"d":"30481.300"},{"v":7.81306,"d":"7.813"},{"v":-0.0123288,"d":"-0.012"},"cytosol,plasma membrane,nucleus","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","plasma membrane",null,null,"AT3G08780.1"]
["Os07t0627700-01","Rice","Glossy1-homologous gene 9Fatty acid hydroxylase domain containing protein. (Os07t0627700-01);Similar to Protein SUR2. (Os07t0627700-02)","7",258,{"v":29906.4,"d":"29906.400"},{"v":8.24743,"d":"8.247"},{"v":0.0937985,"d":"0.094"},"cytosol","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",{"$nulls":3},"cytosol","endoplasmic reticulum,vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","golgi",null,null,"AT1G14290.1"]
["Os07t0627700-02","Rice","Glossy1-homologous gene 9Fatty acid hydroxylase domain containing protein. (Os07t0627700-01);Similar to Protein SUR2. (Os07t0627700-02)","7",109,{"v":12315.2,"d":"12315.200"},{"v":9.57509,"d":"9.575"},{"v":0.129358,"d":"0.129"},"cytosol,extracellular,plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","plasma membrane",null,"mitochondrion",null,null,"plastid","extracellular",null,null,"AT1G26921.1"]
["Os07t0637200-01","Rice","Protein of unknown function DUF537 family protein. (Os07t0637200-01);Hypothetical conserved gene. (Os07t0637200-02)","7",652,{"v":70363.3,"d":"70363.300"},{"v":9.39406,"d":"9.394"},{"v":-0.621319,"d":"-0.621"},"cytosol,peroxisome,nucleus","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"peroxisome","nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G61190.8"]
["Os07t0637200-02","Rice","Protein of unknown function DUF537 family protein. (Os07t0637200-01);Hypothetical conserved gene. (Os07t0637200-02)","7",116,{"v":12860.7,"d":"12860.700"},{"v":10.2918,"d":"10.292"},{"v":0.0301724,"d":"0.030"},"peroxisome","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","plastid",null,"mitochondrion",null,null,"peroxisome","cytosol",null,null,"AT3G62200.1"]
["Os07t0669100-01","Rice","xylose isomeraseSimilar to Xylose isomerase (EC 5.3.1.5). (Os07t0669100-01);Similar to Xylose isomerase. (Os07t0669100-02)","7",479,{"v":53497.6,"d":"53497.600"},{"v":5.3719,"d":"5.372"},{"v":-0.37286,"d":"-0.373"},"plasma membrane","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","cytosol,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","vacuole","msms:plasma membrane:18260611,msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT5G57655.2"]
["Os07t0669100-02","Rice","xylose isomeraseSimilar to Xylose isomerase (EC 5.3.1.5). (Os07t0669100-01);Similar to Xylose isomerase. (Os07t0669100-02)","7",317,{"v":35312.9,"d":"35312.900"},{"v":4.93101,"d":"4.931"},{"v":-0.341956,"d":"-0.342"},"cytosol,plasma membrane","mitochondrion,cytosol","cytosol",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G57655.2"]
["Os07t0675200-01","Rice","endosperm-specific gene 114Conserved hypothetical protein. (Os07t0675200-01)","7",279,{"v":29663.3,"d":"29663.300"},{"v":9.27381,"d":"9.274"},{"v":-0.824731,"d":"-0.825"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","nucleus",null,null,"AT1G02700.1"]
["Os07t0684700-01","Rice","Conserved hypothetical protein. (Os07t0684700-01)","7",204,{"v":21826.2,"d":"21826.200"},{"v":12.0358,"d":"12.036"},{"v":-0.555392,"d":"-0.555"},"vacuole,peroxisome,plastid","mitochondrion,nucleus,vacuole,peroxisome,plastid","nucleus",null,"nucleus","mitochondrion","peroxisome","nucleus",null,"mitochondrion",null,"plastid",null,"vacuole"]
["Os07t0689400-01","Rice","Prolyl Oligopeptidase 17, PROLYL OLIGOPEPTIDASE 17Similar to predicted protein. (Os07t0689400-01)","7",194,{"v":21515.1,"d":"21515.100"},{"v":9.48442,"d":"9.484"},{"v":-0.340722,"d":"-0.341"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid,nucleus","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT2G47390.1"]
["Os08t0101600-01","Rice","SINGLE-STRAND DNA ENDONUCLEASE 1Similar to Flap endonuclease GEN-like 2. (Os08t0101600-01)","8",112,{"v":12758.9,"d":"12758.900"},{"v":10.5251,"d":"10.525"},{"v":0.0821429,"d":"0.082"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G48900.2"]
["Os08t0130000-00","Rice","OsSTA203Putative DNA binding domain containing protein. (Os08t0130000-00)","8",467,{"v":49981.5,"d":"49981.500"},{"v":7.57436,"d":"7.574"},{"v":0.145396,"d":"0.145"},"plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:28056797","28056797:Ning:N:Yang,Tai:T:Wang:2017","AT2G04305.1"]
["Os08t0152300-00","Rice","Similar to P450. (Os08t0152300-00)","8",467,{"v":51461.5,"d":"51461.500"},{"v":8.56172,"d":"8.562"},{"v":-0.0897216,"d":"-0.090"},"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","endoplasmic reticulum","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","endoplasmic reticulum","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT1G64930.1"]
["Os08t0165901-00","Rice","Similar to H0402C08.3 protein. (Os08t0165901-00)","8",169,{"v":18169.3,"d":"18169.300"},{"v":11.7307,"d":"11.731"},{"v":-0.254438,"d":"-0.254"},"mitochondrion","mitochondrion,extracellular,nucleus,plasma membrane,plastid","plastid",null,"extracellular","mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion",null,"plasma membrane"]
["Os08t0260000-01","Rice","Similar to N-acetyltransferase. (Os08t0260000-01)","8",196,{"v":20820.9,"d":"20820.900"},{"v":8.49148,"d":"8.491"},{"v":-0.219388,"d":"-0.219"},"plastid","mitochondrion,extracellular,plastid","plastid",null,null,"mitochondrion","plastid","extracellular,plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G28030.2"]
["Os08t0269500-01","Rice","Conserved hypothetical protein. (Os08t0269500-01)","8",131,{"v":13572.7,"d":"13572.700"},11.189,{"v":0.193893,"d":"0.194"},"extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","extracellular","msms:extracellular:26194822","26194822:Won Kyong:WK:Cho,Tae Kyung:TK:Hyun,Dhinesh:D:Kumar,Yeonggil:Y:Rim,Xiong Yan:XY:Chen,Yeonhwa:Y:Jo,Suwha:S:Kim,Keun Woo:KW:Lee,Zee-Yong:ZY:Park,William J:WJ:Lucas,Jae-Yean:JY:Kim:2015","AT4G08920.1"]
["Os08t0299000-01","Rice","Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-01);Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-02)","8",298,{"v":33549.6,"d":"33549.600"},{"v":6.56949,"d":"6.569"},{"v":-0.38557,"d":"-0.386"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"cytosol","mitochondrion",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT2G25280.1"]
["Os08t0299000-02","Rice","Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-01);Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-02)","8",298,{"v":33549.6,"d":"33549.600"},{"v":6.56949,"d":"6.569"},{"v":-0.38557,"d":"-0.386"},"mitochondrion,cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"cytosol","mitochondrion",null,"mitochondrion",null,"mitochondrion","mitochondrion","cytosol",null,null,"AT2G25280.1"]
["Os08t0300100-01","Rice","Conserved hypothetical protein. (Os08t0300100-01)","8",234,{"v":26693.8,"d":"26693.800"},{"v":6.99404,"d":"6.994"},{"v":-0.405556,"d":"-0.406"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","cytosol,plastid",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G09870.1"]
["Os08t0413850-01","Rice","Protein of unknown function DUF1262 domain containing protein. (Os08t0413850-01)","8",132,{"v":13953.5,"d":"13953.500"},{"v":7.81555,"d":"7.816"},{"v":-0.0424242,"d":"-0.042"},"plastid","mitochondrion,plasma membrane,extracellular,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","peroxisome","plasma membrane,extracellular","plastid","mitochondrion",null,null,"plastid","plastid",null,null,"AT2G34970.1"]
["Os08t0424200-01","Rice","Similar to Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta subunit). (Os08t0424200-01);Non-protein coding transcript. (Os08t0424200-02)","8",310,{"v":33639.5,"d":"33639.500"},7.761,{"v":-0.0635484,"d":"-0.064"},"mitochondrion","mitochondrion,cytosol,peroxisome","cytosol",null,"mitochondrion",null,"cytosol","mitochondrion",null,"mitochondrion",{"$nulls":3},"peroxisome","msms:mitochondrion:19010998,msms:mitochondrion:23027867","23027867:Gai:G:Liu,Han:H:Tian,Yun-Qing:YQ:Huang,Jun:J:Hu,Yan-Xiao:YX:Ji,Shao-Qing:SQ:Li,Yu-Qi:YQ:Feng,Lin:L:Guo,Ying-Guo:YG:Zhu:2012,19010998:Shaobai:S:Huang,Nicolas L:NL:Taylor,Reena:R:Narsai,Holger:H:Eubel,James:J:Whelan,A Harvey:AH:Millar:2009","AT4G34030.1"]
["Os08t0424500-01","Rice","SCENTED KERNEL 2Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)","8",503,{"v":54685.6,"d":"54685.600"},{"v":5.11274,"d":"5.113"},{"v":-0.123658,"d":"-0.124"},"plastid","mitochondrion,peroxisome,plastid","plastid",null,"peroxisome","mitochondrion","peroxisome","mitochondrion,peroxisome,plastid",null,"peroxisome","peroxisome","mitochondrion","plastid","mitochondrion","msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT1G74920.1"]
["Os08t0424500-02","Rice","SCENTED KERNEL 2Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)","8",389,{"v":42359.8,"d":"42359.800"},{"v":4.89689,"d":"4.897"},{"v":-0.0760925,"d":"-0.076"},"cytosol,peroxisome","mitochondrion,cytosol,peroxisome,plastid","cytosol",null,"plastid",null,"peroxisome","mitochondrion,peroxisome,plastid",null,"peroxisome","peroxisome",null,null,"cytosol",null,null,"AT1G74920.2"]
["Os08t0430700-01","Rice","Similar to UVB-resistance protein-like. (Os08t0430700-01);Similar to UVB-resistance protein-like. (Os08t0430700-02)","8",395,{"v":41733.8,"d":"41733.800"},{"v":5.38817,"d":"5.388"},{"v":-0.341013,"d":"-0.341"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"peroxisome","cytosol","msms:cytosol:19685898","19685898:Kelly A:KA:Doroshenk,Andrew J:AJ:Crofts,Robert T:RT:Morris,John J:JJ:Wyrick,Thomas W:TW:Okita:2009","AT5G16040.1"]
["Os08t0430700-02","Rice","Similar to UVB-resistance protein-like. (Os08t0430700-01);Similar to UVB-resistance protein-like. (Os08t0430700-02)","8",395,{"v":41733.8,"d":"41733.800"},{"v":5.38817,"d":"5.388"},{"v":-0.341013,"d":"-0.341"},"cytosol","mitochondrion,cytosol,peroxisome,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"peroxisome","cytosol",null,null,"AT5G16040.1"]
["Os08t0430800-01","Rice","Conserved hypothetical protein. (Os08t0430800-01);Conserved hypothetical protein. (Os08t0430800-02)","8",78,{"v":8455.46,"d":"8455.460"},{"v":8.74956,"d":"8.750"},{"v":0.589744,"d":"0.590"},"endoplasmic reticulum,extracellular","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","endoplasmic reticulum","plasma membrane,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"extracellular"]
["Os08t0430800-02","Rice","Conserved hypothetical protein. (Os08t0430800-01);Conserved hypothetical protein. (Os08t0430800-02)","8",90,{"v":9670.08,"d":"9670.080"},{"v":12.5062,"d":"12.506"},{"v":0.102222,"d":"0.102"},"mitochondrion","mitochondrion,extracellular,plastid,nucleus","nucleus",null,null,"mitochondrion","extracellular","mitochondrion,plastid,nucleus",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT1G26170.1"]
["Os08t0481400-01","Rice","HOMEOBOX GENE 20Similar to HAHB-7 (Fragment). (Os08t0481400-01)","8",269,{"v":28930.4,"d":"28930.400"},{"v":4.37817,"d":"4.378"},{"v":-0.570632,"d":"-0.571"},"nucleus","mitochondrion,peroxisome,nucleus","nucleus",null,"nucleus",null,"nucleus","nucleus",null,"mitochondrion",null,null,"peroxisome","nucleus",null,null,"AT4G40060.1"]
["Os08t0481800-01","Rice","Similar to Plastidic general dicarboxylate transporter. (Os08t0481800-01)","8",239,{"v":25940.8,"d":"25940.800"},{"v":6.50214,"d":"6.502"},{"v":0.762343,"d":"0.762"},"plastid","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,"plastid",null,"cytosol","vacuole",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane","msms:vacuole:18557835,msms:plastid:21433289,msms:plasma membrane:27800704,msms:plastid:27992503","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G64290.1"]
["Os08t0483200-01","Rice","Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0483200-01)","8",269,{"v":29133.7,"d":"29133.700"},{"v":9.80665,"d":"9.807"},{"v":-0.267286,"d":"-0.267"},"mitochondrion,plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","nucleus","plastid","mitochondrion","plastid",null,"mitochondrion","plastid","plastid",null,null,"AT4G09040.1"]
["Os08t0506500-00","Rice","Similar to tRNA/rRNA methyltransferase (SpoU) family protein. (Os08t0506500-00)","8",244,{"v":26317.8,"d":"26317.800"},{"v":9.82217,"d":"9.822"},{"v":-0.0254098,"d":"-0.025"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,"nucleus","mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G26880.1"]
["Os08t0510800-01","Rice","Conserved hypothetical protein. (Os08t0510800-01)","8",378,{"v":39696.2,"d":"39696.200"},{"v":10.9734,"d":"10.973"},{"v":-0.339683,"d":"-0.340"},"cytosol,peroxisome,plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"plastid","peroxisome",null,null,"AT3G57990.1"]
["Os08t0520400-01","Rice","Conserved hypothetical protein. (Os08t0520400-01)","8",466,{"v":49974.8,"d":"49974.800"},{"v":5.38511,"d":"5.385"},{"v":0.26073,"d":"0.261"},"peroxisome","mitochondrion,nucleus,cytosol,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","plastid",null,"mitochondrion",null,null,"cytosol","peroxisome",null,null,"AT5G04610.1"]
["Os08t0533600-01","Rice","ACT DOMAIN REPEAT PROTEIN 8Similar to ACR4. (Os08t0533600-01);Similar to ACR4. (Os08t0533600-02)","8",463,{"v":50073.4,"d":"50073.400"},{"v":4.95885,"d":"4.959"},{"v":-0.217279,"d":"-0.217"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G69040.2"]
["Os08t0533600-02","Rice","ACT DOMAIN REPEAT PROTEIN 8Similar to ACR4. (Os08t0533600-01);Similar to ACR4. (Os08t0533600-02)","8",463,{"v":50073.4,"d":"50073.400"},{"v":4.95885,"d":"4.959"},{"v":-0.217279,"d":"-0.217"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"nucleus",null,"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G69040.2"]
["Os08t0533900-00","Rice","Hypothetical conserved gene. (Os08t0533900-00)","8",157,{"v":17679.9,"d":"17679.900"},{"v":12.5375,"d":"12.538"},{"v":-0.242038,"d":"-0.242"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","vacuole","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plasma membrane","plasma membrane",null,null,"AT5G59520.1"]
["Os08t0550850-01","Rice","Hypothetical gene. (Os08t0550850-01)","8",103,{"v":11321.6,"d":"11321.600"},{"v":12.7364,"d":"12.736"},{"v":-1.28738,"d":"-1.287"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT2G15610.1"]
["Os08t0558200-01","Rice","GLUTAREDOXIN 20Thioredoxin fold domain containing protein. (Os08t0558200-01)","8",341,{"v":37220.7,"d":"37220.700"},{"v":7.29905,"d":"7.299"},{"v":-0.188856,"d":"-0.189"},"plastid","mitochondrion,plastid","plastid",null,null,"plastid","mitochondrion","plastid","plastid","mitochondrion",null,"mitochondrion","plastid","plastid",null,null,"AT5G03880.1"]
["Os09t0104200-01","Rice","DNA REPAIR PROTEIN RAD51DDNA repair protein, Splicing variant with unknown function (Os09t0104200-01);DNA repair protein, Meiosis and floral development (Os09t0104200-02);DNA repair protein, Splicing variant with unknown function (Os09t0104200-03)","9",184,{"v":19834.2,"d":"19834.200"},{"v":8.36944,"d":"8.369"},{"v":0.230978,"d":"0.231"},"nucleus,cytosol,golgi","mitochondrion,nucleus,cytosol,golgi,plastid","nucleus",null,null,"plastid","cytosol",null,null,"mitochondrion",null,null,"golgi","nucleus",null,null,"AT1G07745.3"]
["Os09t0104200-02","Rice","DNA REPAIR PROTEIN RAD51DDNA repair protein, Splicing variant with unknown function (Os09t0104200-01);DNA repair protein, Meiosis and floral development (Os09t0104200-02);DNA repair protein, Splicing variant with unknown function (Os09t0104200-03)","9",283,{"v":30293.2,"d":"30293.200"},{"v":9.7529,"d":"9.753"},{"v":0.0473498,"d":"0.047"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol",null,null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT1G07745.2"]
["Os09t0104200-03","Rice","DNA REPAIR PROTEIN RAD51DDNA repair protein, Splicing variant with unknown function (Os09t0104200-01);DNA repair protein, Meiosis and floral development (Os09t0104200-02);DNA repair protein, Splicing variant with unknown function (Os09t0104200-03)","9",256,{"v":27439.9,"d":"27439.900"},{"v":10.2777,"d":"10.278"},{"v":0.196484,"d":"0.196"},"cytosol,plastid,nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol",null,null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT1G07745.2"]
["Os09t0281300-02","Rice","Protein of unknown function DUF1218 family protein. (Os09t0281300-02)","9",190,{"v":20813.5,"d":"20813.500"},{"v":9.34246,"d":"9.342"},{"v":0.484737,"d":"0.485"},"plasma membrane,endoplasmic reticulum","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","endoplasmic reticulum","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","cytosol","plasma membrane",null,null,"AT1G13380.1"]
["Os09t0345700-01","Rice","ATP-NAD kinase, PpnK-type domain containing protein. (Os09t0345700-01)","9",325,{"v":35518.5,"d":"35518.500"},{"v":6.94795,"d":"6.948"},{"v":-0.165231,"d":"-0.165"},"mitochondrion","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"mitochondrion","mitochondrion","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT1G78590.1"]
["Os09t0380200-01","Rice","VIRESCENT 5A, Young Leaf Chlorosis 1Chaperone-like protein of protochlorophyllide oxidoreductase (POR), J-like protein, Chloroplast-localized protein containing DUF3353, Regulation of chlorophyll biosynthesis, Chlorophyll and lutein accumulation, Chloroplast development (Os09t0380200-01)","9",269,{"v":30039,"d":"30039.000"},{"v":10.3383,"d":"10.338"},{"v":0.0851301,"d":"0.085"},"plastid","mitochondrion,plasma membrane,plastid","plastid","plastid",null,"plastid","mitochondrion",null,null,"mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane","msms:plastid:21433289,gfp:plastid:23053539","23053539:Kunneng:K:Zhou,Yulong:Y:Ren,Jia:J:Lv,Yihua:Y:Wang,Feng:F:Liu,Feng:F:Zhou,Shaolu:S:Zhao,Saihua:S:Chen,Cheng:C:Peng,Xin:X:Zhang,Xiuping:X:Guo,Zhijun:Z:Cheng,Jiulin:J:Wang,Fuqing:F:Wu,Ling:L:Jiang,Jianmin:J:Wan:2013,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011","AT5G23040.2"]
["Os09t0381100-01","Rice","Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)","9",530,{"v":58152.3,"d":"58152.300"},{"v":9.54846,"d":"9.548"},{"v":0.463396,"d":"0.463"},"plasma membrane","mitochondrion,peroxisome,plasma membrane,nucleus","nucleus",{"$nulls":3},"peroxisome","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","plasma membrane","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G62890.3"]
["Os09t0381100-02","Rice","Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)","9",530,{"v":58152.3,"d":"58152.300"},{"v":9.54846,"d":"9.548"},{"v":0.463396,"d":"0.463"},"plasma membrane","mitochondrion,peroxisome,plasma membrane,nucleus","nucleus",{"$nulls":3},"peroxisome","plasma membrane",null,"mitochondrion",null,null,"plasma membrane","plasma membrane",null,null,"AT5G62890.3"]
["Os09t0381100-03","Rice","Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-01);Xanthine/uracil/vitamin C permease family protein. (Os09t0381100-02);Similar to Permease I. (Os09t0381100-03)","9",260,{"v":28850.9,"d":"28850.900"},{"v":9.04223,"d":"9.042"},{"v":0.409231,"d":"0.409"},"cytosol,plasma membrane","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","nucleus",null,"plasma membrane",null,"cytosol","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT5G49990.2"]
["Os09t0411650-01","Rice","SET protein 36Similar to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose- bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisco LSMT) (rbcMT). (Os09t0411650-01)","9",495,{"v":54303.3,"d":"54303.300"},{"v":4.46566,"d":"4.466"},{"v":-0.157374,"d":"-0.157"},"plastid","mitochondrion,plastid,nucleus","plastid",null,"plastid","plastid","plastid","plastid,nucleus","plastid","plastid",null,"plastid","plastid","mitochondrion","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G14030.1"]
["Os09t0419500-01","Rice","Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os09t0419500-01);Zinc finger, C6HC-type domain containing protein. (Os09t0419500-02)","9",398,{"v":42697.7,"d":"42697.700"},{"v":4.97016,"d":"4.970"},{"v":-0.158543,"d":"-0.159"},"nucleus","mitochondrion,nucleus,cytosol,golgi","nucleus",{"$nulls":3},"nucleus","nucleus,golgi",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT3G53690.1"]
["Os09t0419500-02","Rice","Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os09t0419500-01);Zinc finger, C6HC-type domain containing protein. (Os09t0419500-02)","9",317,{"v":34391.2,"d":"34391.200"},{"v":5.62379,"d":"5.624"},{"v":-0.148896,"d":"-0.149"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G53690.1"]
["Os09t0424850-01","Rice","Hypothetical protein. (Os09t0424850-01)","9",86,{"v":9418.29,"d":"9418.290"},{"v":3.90206,"d":"3.902"},{"v":0.180233,"d":"0.180"},"plastid","extracellular,nucleus,cytosol,plasma membrane,plastid","nucleus",null,null,"plastid","extracellular","plasma membrane","plastid","plastid",null,"plastid","plastid","cytosol",null,null,"AT4G38600.2"]
["Os09t0433600-01","Rice","Similar to Histone H4. (Os09t0433600-01)","9",103,{"v":11410.2,"d":"11410.200"},{"v":12.0052,"d":"12.005"},{"v":-0.524272,"d":"-0.524"},"nucleus","mitochondrion,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus","msms:nucleus:15276429,msms:nucleus:18022940,msms:nucleus:18203134,msms:plasma membrane:18557835,msms:extracellular:19038476,msms:nucleus:19621931,msms:plastid:21433289,msms:nucleus:23777608,msms:extracellular:24083427,msms:nucleus:26035336,msms:plasma membrane:27800704,msms:plastid:27992503,msms:extracellular:28232208","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,18203134:Guosheng:G:Li,Babi Ramesh Reddy:BR:Nallamilli,Feng:F:Tan,Zhaohua:Z:Peng:2008,23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,15276429:Md Monowar Karim:MM:Khan,Setsuko:S:Komatsu:2004,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,18557835:Sally-Anne:SA:Whiteman,Thomas S:TS:Nühse,David A:DA:Ashford,Dale:D:Sanders,Frans J M:FJ:Maathuis:2008,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,21433289:Sonja:S:Reiland,Jonas:J:Grossmann,Katja:K:Baerenfaller,Peter:P:Gehrig,Adriano:A:Nunes-Nesi,Alisdair R:AR:Fernie,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2011,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009,19038476:Xiong-Yan:XY:Chen,Sun Tae:ST:Kim,Won Kyong:WK:Cho,Yeonggil:Y:Rim,Suwha:S:Kim,Seon-Won:SW:Kim,Kyu Young:KY:Kang,Zee Yong:ZY:Park,Jae-Yean:JY:Kim:2009,28232208:Yiming:Y:Wang,Ravi:R:Gupta,Wei:W:Song,Hyun-Hye:HH:Huh,So Eui:SE:Lee,Jingni:J:Wu,Ganesh Kumar:GK:Agrawal,Randeep:R:Rakwal,Kyu Young:KY:Kang,Sang-Ryeol:SR:Park,Sun Tae:ST:Kim:2017","AT5G59970.2"]
["Os09t0460400-01","Rice","Alpha/beta hydrolase fold-3 domain containing protein. (Os09t0460400-01)","9",315,{"v":33242.4,"d":"33242.400"},{"v":4.73836,"d":"4.738"},{"v":0.00698413,"d":"0.007"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT1G19190.1"]
["Os09t0462100-01","Rice","Alpha/beta hydrolase fold-3 domain containing protein. (Os09t0462100-01)","9",380,{"v":41195.5,"d":"41195.500"},{"v":8.20453,"d":"8.205"},{"v":-0.0855263,"d":"-0.086"},"plasma membrane","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","plastid","golgi","msms:plasma membrane:18260611,msms:plasma membrane:19502382,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,19502382:Masayuki:M:Fujiwara,Satoshi:S:Hamada,Minori:M:Hiratsuka,Yoichiro:Y:Fukao,Tsutomu:T:Kawasaki,Ko:K:Shimamoto:2009,18260611:Siria H A:SH:Natera,Kristina L:KL:Ford,Andrew M:AM:Cassin,John H:JH:Patterson,Edward J:EJ:Newbigin,Antony:A:Bacic:2008","AT1G47480.1"]
["Os09t0487700-01","Rice","Ovarian tumour, otubain domain containing protein. (Os09t0487700-01)","9",306,{"v":33893.7,"d":"33893.700"},{"v":9.14514,"d":"9.145"},{"v":-0.39183,"d":"-0.392"},"plastid","mitochondrion,cytosol,peroxisome,plastid","plastid",null,null,"mitochondrion","peroxisome","mitochondrion,peroxisome,plastid","plastid","mitochondrion","peroxisome","mitochondrion","plastid","cytosol",null,null,"AT3G57810.2"]
["Os09t0498000-01","Rice","Hypothetical gene. (Os09t0498000-01)","9",71,{"v":8536.3,"d":"8536.300"},{"v":8.47459,"d":"8.475"},{"v":0.242254,"d":"0.242"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","extracellular","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane",null,null,"AT5G66810.2"]
["Os09t0507701-00","Rice","Hypothetical gene. (Os09t0507701-00)","9",121,{"v":13756.1,"d":"13756.100"},{"v":6.92735,"d":"6.927"},{"v":0.360331,"d":"0.360"},"extracellular","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"plastid","extracellular","mitochondrion,plastid","mitochondrion","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","extracellular",null,null,"AT2G04920.1"]
["Os09t0512200-01","Rice","AMP-dependent synthetase/ligase domain containing protein. (Os09t0512200-01)","9",75,{"v":8610.09,"d":"8610.090"},{"v":8.47885,"d":"8.479"},-0.616,"cytosol,peroxisome","plasma membrane,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,"peroxisome","peroxisome",null,"peroxisome",{"$nulls":3},"cytosol",null,null,"AT3G23790.1"]
["Os09t0520000-01","Rice","Hypothetical protein. (Os09t0520000-01)","9",82,{"v":8817.51,"d":"8817.510"},{"v":7.18322,"d":"7.183"},{"v":0.171951,"d":"0.172"},"cytosol","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","mitochondrion,extracellular,nucleus,peroxisome,plasma membrane,plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT3G28740.1"]
["Os09t0521400-01","Rice","Similar to HMG-CoA synthase. (Os09t0521400-01)","9",476,{"v":52946.8,"d":"52946.800"},{"v":6.07169,"d":"6.072"},{"v":-0.312815,"d":"-0.313"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"mitochondrion",null,"cytosol","cytosol,plastid",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT4G11820.2"]
["Os09t0531100-01","Rice","Conserved hypothetical protein. (Os09t0531100-01)","9",329,{"v":37131.4,"d":"37131.400"},{"v":5.62209,"d":"5.622"},{"v":-0.48997,"d":"-0.490"},"plastid","cytosol,plastid,nucleus","plastid",null,null,"plastid","cytosol","plastid","plastid","plastid",null,"plastid","plastid","nucleus","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT2G21385.1"]
["Os09t0541700-01","Rice","Similar to mRNA, clone: RTFL01-25-P14. (Os09t0541700-01);Similar to mRNA, clone: RTFL01-25-P14. (Os09t0541700-02)","9",194,{"v":20676.9,"d":"20676.900"},{"v":5.63669,"d":"5.637"},{"v":0.0407217,"d":"0.041"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT5G66090.1"]
["Os09t0541700-02","Rice","Similar to mRNA, clone: RTFL01-25-P14. (Os09t0541700-01);Similar to mRNA, clone: RTFL01-25-P14. (Os09t0541700-02)","9",194,{"v":20676.9,"d":"20676.900"},{"v":5.63669,"d":"5.637"},{"v":0.0407217,"d":"0.041"},"plastid","plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT5G66090.1"]
["Os09t0545550-00","Rice","Hypothetical gene. (Os09t0545550-00)","9",242,{"v":25055.7,"d":"25055.700"},{"v":4.79792,"d":"4.798"},{"v":0.0809917,"d":"0.081"},"mitochondrion,cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"mitochondrion","plasma membrane",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G11778.1"]
["Os09t0546900-01","Rice","SMALL AUXIN-UP RNA 53Similar to Auxin induced protein. (Os09t0546900-01)","9",144,{"v":15910.3,"d":"15910.300"},{"v":8.60812,"d":"8.608"},{"v":0.0958333,"d":"0.096"},"mitochondrion","mitochondrion,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus","mitochondrion","mitochondrion",null,"mitochondrion","plastid","mitochondrion",null,null,"AT5G27780.1"]
["Os09t0563800-01","Rice","ATPase, AAA-type, core domain containing protein. (Os09t0563800-01)","9",427,{"v":47751.3,"d":"47751.300"},{"v":8.02154,"d":"8.022"},{"v":0.0163934,"d":"0.016"},"cytosol,extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,null,"cytosol","extracellular",null,null,"AT5G08470.2"]
["Os09t0569780-01","Rice","Conserved hypothetical protein. (Os09t0569780-01)","9",69,{"v":8525.38,"d":"8525.380"},{"v":9.39924,"d":"9.399"},{"v":-0.507246,"d":"-0.507"},"cytosol,vacuole","mitochondrion,nucleus,cytosol,vacuole,plastid","plastid",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",{"$nulls":3},"vacuole",null,null,"AT2G29680.1"]
["Os09t0573000-01","Rice","Pentatricopeptide repeat domain containing protein. (Os09t0573000-01)","9",555,{"v":60827.6,"d":"60827.600"},{"v":8.49047,"d":"8.490"},{"v":0.0735135,"d":"0.074"},"plastid","mitochondrion,peroxisome,plastid,nucleus","plastid",null,null,"mitochondrion","nucleus","mitochondrion,peroxisome,plastid","plastid","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT4G21065.1"]
["Os10t0105933-00","Rice","Similar to transferase family protein. (Os10t0105933-00)","10",133,{"v":14070.9,"d":"14070.900"},{"v":4.58509,"d":"4.585"},{"v":0.138346,"d":"0.138"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol",null,"cytosol","cytosol",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT3G03480.1"]
["Os10t0116400-01","Rice","Hypothetical conserved gene. (Os10t0116400-01)","10",173,{"v":19661.6,"d":"19661.600"},{"v":12.1266,"d":"12.127"},{"v":-0.335838,"d":"-0.336"},"plastid","mitochondrion,nucleus,cytosol,peroxisome,plastid","plastid",null,"cytosol","mitochondrion","peroxisome","nucleus",null,"mitochondrion",null,"plastid",null,"plastid",null,null,"AT3G21800.1"]
["Os10t0163100-01","Rice","AUTOPHAGY ASSOCIATED GENE 9BSimilar to Autophagy protein Apg9 containing protein, expressed. (Os10t0163100-01)","10",927,{"v":106331,"d":"106331.000"},{"v":7.3519,"d":"7.352"},{"v":-0.272168,"d":"-0.272"},"mitochondrion,plasma membrane","mitochondrion,plasma membrane,nucleus,peroxisome,plastid","nucleus",null,null,"mitochondrion","peroxisome","plastid","mitochondrion","mitochondrion",null,"mitochondrion","plasma membrane","plasma membrane",null,null,"AT2G31260.1"]
["Os10t0369950-00","Rice","Hypothetical gene. (Os10t0369950-00)","10",85,{"v":9551.84,"d":"9551.840"},{"v":9.29903,"d":"9.299"},{"v":0.164706,"d":"0.165"},"cytosol,plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","plasma membrane","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","cytosol","extracellular",null,null,"AT1G02670.4"]
["Os10t0396300-01","Rice","Similar to MOB1. (Os10t0396300-01)","10",216,{"v":24818.1,"d":"24818.100"},{"v":8.31819,"d":"8.318"},{"v":-0.196296,"d":"-0.196"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"cytosol",null,"cytosol","cytosol,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT5G45550.1"]
["Os10t0421500-01","Rice","Similar to cDNA clone:J013149A17, full insert sequence. (Os10t0421500-01);Similar to cDNA clone:J033095I19, full insert sequence. (Os10t0421500-02)","10",63,{"v":7190.06,"d":"7190.060"},{"v":11.9146,"d":"11.915"},{"v":-0.207937,"d":"-0.208"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","cytosol","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion",null,null,"AT3G05350.1"]
["Os10t0421500-02","Rice","Similar to cDNA clone:J013149A17, full insert sequence. (Os10t0421500-01);Similar to cDNA clone:J033095I19, full insert sequence. (Os10t0421500-02)","10",70,{"v":8117.42,"d":"8117.420"},11.735,{"v":0.0542857,"d":"0.054"},"mitochondrion","mitochondrion,cytosol,plastid","plastid",null,null,"mitochondrion","mitochondrion","plastid","mitochondrion","mitochondrion",null,"mitochondrion","cytosol","mitochondrion",null,null,"AT2G22200.1"]
["Os10t0437000-01","Rice","Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-01);Glycosyl transferase, family 14 protein. (Os10t0437000-02);Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-03)","10",211,{"v":23237,"d":"23237.000"},{"v":10.1229,"d":"10.123"},{"v":0.0189573,"d":"0.019"},"plasma membrane,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","mitochondrion,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT3G03690.2"]
["Os10t0437000-02","Rice","Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-01);Glycosyl transferase, family 14 protein. (Os10t0437000-02);Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-03)","10",420,{"v":47547.3,"d":"47547.300"},{"v":10.5254,"d":"10.525"},{"v":-0.280714,"d":"-0.281"},"golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","golgi",null,null,"AT3G03690.1"]
["Os10t0437000-03","Rice","Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-01);Glycosyl transferase, family 14 protein. (Os10t0437000-02);Similar to Secondary cell wall-related glycosyltransferase family 14. (Os10t0437000-03)","10",207,{"v":22793.5,"d":"22793.500"},{"v":10.1236,"d":"10.124"},{"v":0.0531401,"d":"0.053"},"plasma membrane,golgi","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","golgi","mitochondrion,cytosol,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","plasma membrane",null,null,"AT3G03690.2"]
["Os10t0457500-01","Rice","Similar to Yeast ham (Hydroxylaminopurine sensitivity) related protein 1 (HAM-1- like protein). (Os10t0457500-01)","10",205,{"v":21940.4,"d":"21940.400"},{"v":6.77983,"d":"6.780"},{"v":-0.124878,"d":"-0.125"},"cytosol,plastid","mitochondrion,cytosol,plastid","plastid",null,"mitochondrion","mitochondrion","cytosol","plastid",null,"mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT4G13720.2"]
["Os10t0465000-01","Rice","OsWD40-177Hypothetical conserved gene. (Os10t0465000-01);Hypothetical conserved gene. (Os10t0465000-02);Conserved hypothetical protein. (Os10t0465000-03)","10",238,{"v":26249.5,"d":"26249.500"},{"v":5.81156,"d":"5.812"},{"v":0.0336134,"d":"0.034"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G08560.1"]
["Os10t0465000-02","Rice","OsWD40-177Hypothetical conserved gene. (Os10t0465000-01);Hypothetical conserved gene. (Os10t0465000-02);Conserved hypothetical protein. (Os10t0465000-03)","10",238,{"v":26249.5,"d":"26249.500"},{"v":5.81156,"d":"5.812"},{"v":0.0336134,"d":"0.034"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT5G08560.1"]
["Os10t0465000-03","Rice","OsWD40-177Hypothetical conserved gene. (Os10t0465000-01);Hypothetical conserved gene. (Os10t0465000-02);Conserved hypothetical protein. (Os10t0465000-03)","10",138,{"v":15457.8,"d":"15457.800"},{"v":5.17592,"d":"5.176"},{"v":0.213768,"d":"0.214"},"extracellular","mitochondrion,extracellular,nucleus","nucleus",{"$nulls":3},"extracellular","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT5G43920.1"]
["Os10t0480200-01","Rice","HOMEOBOX GENE 9Similar to Rolled leaf1. (Os10t0480200-01);Similar to Rolled leaf1. (Os10t0480200-02);Similar to Homeobox-leucine zipper protein HOX9. (Os10t0480200-03)","10",840,{"v":92137.4,"d":"92137.400"},{"v":5.59438,"d":"5.594"},{"v":-0.149286,"d":"-0.149"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT5G60690.1"]
["Os10t0480200-02","Rice","HOMEOBOX GENE 9Similar to Rolled leaf1. (Os10t0480200-01);Similar to Rolled leaf1. (Os10t0480200-02);Similar to Homeobox-leucine zipper protein HOX9. (Os10t0480200-03)","10",840,{"v":92137.4,"d":"92137.400"},{"v":5.59438,"d":"5.594"},{"v":-0.149286,"d":"-0.149"},"nucleus","mitochondrion,plastid,nucleus","nucleus",{"$nulls":3},"nucleus","nucleus",null,"mitochondrion",null,null,"plastid","nucleus",null,null,"AT5G60690.1"]
["Os10t0480200-03","Rice","HOMEOBOX GENE 9Similar to Rolled leaf1. (Os10t0480200-01);Similar to Rolled leaf1. (Os10t0480200-02);Similar to Homeobox-leucine zipper protein HOX9. (Os10t0480200-03)","10",319,{"v":35162.2,"d":"35162.200"},{"v":4.4539,"d":"4.454"},{"v":-0.0253918,"d":"-0.025"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"cytosol",null,null,"AT1G52150.1"]
["Os10t0484700-01","Rice","Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0484700-01)","10",412,{"v":45184.6,"d":"45184.600"},{"v":6.43434,"d":"6.434"},{"v":-0.0992718,"d":"-0.099"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT1G77670.1"]
["Os10t0485300-01","Rice","EX1Hypothetical conserved gene. (Os10t0485300-01)","10",727,{"v":81212.2,"d":"81212.200"},{"v":4.97834,"d":"4.978"},{"v":-0.658597,"d":"-0.659"},"plastid","plastid","plastid",null,null,"plastid","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT4G33630.1"]
["Os10t0493900-01","Rice","Protein of unknown function DUF6, transmembrane domain containing protein. (Os10t0493900-01)","10",163,{"v":17725.7,"d":"17725.700"},{"v":4.9091,"d":"4.909"},{"v":0.634356,"d":"0.634"},"plasma membrane,golgi","extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","nucleus",null,"nucleus",null,"golgi","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"plasma membrane",null,null,"AT3G02690.1"]
["Os10t0514400-01","Rice","Similar to Cytochrome P450 family protein. (Os10t0514400-01)","10",97,{"v":10381.6,"d":"10381.600"},{"v":11.7527,"d":"11.753"},{"v":-0.218557,"d":"-0.219"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","mitochondrion","plastid","plastid","mitochondrion",null,"plastid","plastid","cytosol",null,null,"AT1G52630.1"]
["Os10t0569100-01","Rice","PIG-P domain containing protein. (Os10t0569100-01)","10",110,{"v":11868.4,"d":"11868.400"},{"v":9.97856,"d":"9.979"},{"v":0.233636,"d":"0.234"},"plastid","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","mitochondrion","plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"plastid","plastid",null,null,"AT2G39445.1"]
["Os11t0139700-01","Rice","Hypothetical conserved gene. (Os11t0139700-01)","11",28,{"v":3166.97,"d":"3166.970"},{"v":12.9771,"d":"12.977"},{"v":0.421429,"d":"0.421"},"mitochondrion","mitochondrion,vacuole,plastid,nucleus","nucleus",null,null,"mitochondrion","mitochondrion","plastid",null,"mitochondrion",null,"mitochondrion",null,"vacuole",null,null,"AT4G33650.1"]
["Os11t0148800-00","Rice","Zinc finger, FYVE/PHD-type domain containing protein. (Os11t0148800-00)","11",361,{"v":40056,"d":"40056.000"},{"v":7.28798,"d":"7.288"},{"v":-0.684765,"d":"-0.685"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT5G22760.3"]
["Os11t0160600-01","Rice","Similar to GRAS family transcription factor containing protein. (Os11t0160600-01)","11",50,{"v":5875.98,"d":"5875.980"},{"v":6.50469,"d":"6.505"},-0.476,"cytosol","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","peroxisome,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol",null,null,"AT2G14080.1"]
["Os11t0170400-01","Rice","Conserved hypothetical protein. (Os11t0170400-01);Conserved hypothetical protein. (Os11t0170400-02)","11",104,{"v":12066.8,"d":"12066.800"},{"v":8.39491,"d":"8.395"},{"v":-0.0211538,"d":"-0.021"},"extracellular","mitochondrion,extracellular,nucleus,peroxisome,plastid","nucleus",null,null,"plastid","peroxisome","nucleus",null,"mitochondrion",null,null,"extracellular","extracellular",null,null,"AT3G18590.1"]
["Os11t0170400-02","Rice","Conserved hypothetical protein. (Os11t0170400-01);Conserved hypothetical protein. (Os11t0170400-02)","11",96,{"v":10483.5,"d":"10483.500"},{"v":7.83694,"d":"7.837"},{"v":-0.160417,"d":"-0.160"},"mitochondrion","mitochondrion,plasma membrane,nucleus,peroxisome,plastid","plastid",null,"plasma membrane","mitochondrion","peroxisome","plasma membrane,nucleus",null,"mitochondrion",null,"mitochondrion","mitochondrion","mitochondrion",null,null,"AT4G11640.1"]
["Os11t0237700-01","Rice","Similar to URF 4-related. (Os11t0237700-01)","11",263,{"v":29474.4,"d":"29474.400"},{"v":10.4002,"d":"10.400"},{"v":-0.480989,"d":"-0.481"},"plastid","mitochondrion,plastid,nucleus","plastid",null,null,"plastid","plastid","nucleus","plastid","mitochondrion",null,"plastid","nucleus","nucleus",null,null,"AT1G55140.1"]
["Os11t0430100-00","Rice","Hypothetical conserved gene. (Os11t0430100-00)","11",173,{"v":19322.6,"d":"19322.600"},{"v":12.2563,"d":"12.256"},{"v":-0.265318,"d":"-0.265"},"cytosol,plastid,nucleus","extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","nucleus",null,null,"plastid","cytosol","nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"nucleus","plastid",null,null,"AT3G18915.1"]
["Os11t0448400-01","Rice","SIGMA FACTOR 2ARNA polymerase sigma factor, region 2 domain containing protein. (Os11t0448400-01);Similar to Sigma-70 region 3 family protein, expressed. (Os11t0448400-02)","11",368,{"v":39525.9,"d":"39525.900"},{"v":9.34299,"d":"9.343"},{"v":-0.334783,"d":"-0.335"},"plastid","plastid,nucleus","plastid",null,"nucleus","plastid","plastid","nucleus","plastid","plastid",null,"plastid","plastid","nucleus",null,null,"AT1G08540.1"]
["Os11t0448400-02","Rice","SIGMA FACTOR 2ARNA polymerase sigma factor, region 2 domain containing protein. (Os11t0448400-01);Similar to Sigma-70 region 3 family protein, expressed. (Os11t0448400-02)","11",423,{"v":47930.7,"d":"47930.700"},10.444,{"v":-0.61253,"d":"-0.613"},"nucleus","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"nucleus","cytosol",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT1G08540.1"]
["Os11t0526200-01","Rice","Similar to predicted protein. (Os11t0526200-01)","11",263,{"v":27914.9,"d":"27914.900"},{"v":10.3155,"d":"10.316"},{"v":0.146768,"d":"0.147"},"mitochondrion","mitochondrion,vacuole,plastid,golgi","plastid",null,null,"mitochondrion","mitochondrion","plastid,golgi",null,"plastid",null,"mitochondrion",null,"vacuole",null,null,"AT3G26710.1"]
["Os11t0562600-00","Rice","Conserved hypothetical protein. (Os11t0562600-00)","11",105,{"v":11310.9,"d":"11310.900"},{"v":12.2066,"d":"12.207"},{"v":0.0904762,"d":"0.090"},"mitochondrion,endoplasmic reticulum,extracellular","mitochondrion,endoplasmic reticulum,extracellular,nucleus","nucleus",null,"endoplasmic reticulum","mitochondrion","endoplasmic reticulum","nucleus",null,"mitochondrion",null,"mitochondrion",null,"extracellular",null,null,"AT1G20120.1"]
["Os11t0586300-01","Rice","Conserved hypothetical protein. (Os11t0586300-01);Hypothetical conserved gene. (Os11t0586300-02)","11",537,{"v":60823.3,"d":"60823.300"},{"v":6.05337,"d":"6.053"},{"v":-1.18547,"d":"-1.185"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid",null,"nucleus","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G55760.2"]
["Os11t0586300-02","Rice","Conserved hypothetical protein. (Os11t0586300-01);Hypothetical conserved gene. (Os11t0586300-02)","11",179,{"v":21272.8,"d":"21272.800"},{"v":6.70152,"d":"6.702"},{"v":-1.5676,"d":"-1.568"},"cytosol,nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",{"$nulls":3},"nucleus",null,null,"AT3G55760.2"]
["Os12t0118400-01","Rice","Similar to Inwardly rectifying potassium channel subunit. (Os12t0118400-01);Similar to Catalytic/ hydrolase. (Os12t0118400-02)","12",92,{"v":10609,"d":"10609.000"},{"v":10.3171,"d":"10.317"},{"v":0.172826,"d":"0.173"},"mitochondrion","mitochondrion,vacuole,plasma membrane,plastid","plastid",null,null,"mitochondrion","plasma membrane","vacuole",null,"mitochondrion",null,"mitochondrion",null,"mitochondrion",null,null,"AT2G26650.2"]
["Os12t0118400-02","Rice","Similar to Inwardly rectifying potassium channel subunit. (Os12t0118400-01);Similar to Catalytic/ hydrolase. (Os12t0118400-02)","12",529,{"v":58751.8,"d":"58751.800"},{"v":9.18166,"d":"9.182"},{"v":-0.110208,"d":"-0.110"},"peroxisome","plasma membrane,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,peroxisome,plastid","nucleus",{"$nulls":3},"peroxisome","vacuole,plasma membrane,plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,null,"cytosol","peroxisome",null,null,"AT3G10840.1"]
["Os12t0136600-01","Rice","Similar to cDNA clone:002-116-A09, full insert sequence. (Os12t0136600-01)","12",145,{"v":16039.7,"d":"16039.700"},{"v":4.48392,"d":"4.484"},{"v":-0.722069,"d":"-0.722"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"cytosol","plastid","cytosol","nucleus",null,"mitochondrion",null,"plastid","cytosol","nucleus",null,null,"AT2G41600.3"]
["Os12t0151900-01","Rice","Hypothetical protein. (Os12t0151900-01)","12",187,{"v":21215.5,"d":"21215.500"},{"v":7.19476,"d":"7.195"},{"v":-0.19893,"d":"-0.199"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","plastid,nucleus",null,"mitochondrion",null,null,"nucleus","cytosol",null,null,"AT2G07715.1"]
["Os12t0155200-01","Rice","Similar to Rac GTPase activating protein. (Os12t0155200-01)","12",129,{"v":14367.2,"d":"14367.200"},{"v":4.87889,"d":"4.879"},{"v":-0.00465116,"d":"-0.005"},"cytosol","mitochondrion,nucleus,cytosol,golgi,plastid","nucleus",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"golgi","cytosol",null,null,"AT1G08340.1"]
["Os12t0159600-01","Rice","Harpin-induced 1 domain containing protein. (Os12t0159600-01);Harpin-induced 1 domain containing protein. (Os12t0159600-02)","12",212,{"v":23144.7,"d":"23144.700"},{"v":8.20049,"d":"8.200"},{"v":0.139623,"d":"0.140"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","extracellular,plastid",null,"mitochondrion",null,null,"endoplasmic reticulum","plasma membrane","msms:plastid:27992503","27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016","AT3G44220.1"]
["Os12t0159600-02","Rice","Harpin-induced 1 domain containing protein. (Os12t0159600-01);Harpin-induced 1 domain containing protein. (Os12t0159600-02)","12",212,{"v":23144.7,"d":"23144.700"},{"v":8.20049,"d":"8.200"},{"v":0.139623,"d":"0.140"},"plasma membrane,endoplasmic reticulum,golgi","mitochondrion,extracellular,nucleus,endoplasmic reticulum,golgi,plasma membrane,plastid","nucleus",{"$nulls":3},"golgi","extracellular,plastid",null,"mitochondrion",null,null,"endoplasmic reticulum","plasma membrane",null,null,"AT3G44220.1"]
["Os12t0169600-01","Rice","Similar to Fructose-bisphosphate aldolase. (Os12t0169600-01)","12",422,{"v":46089.9,"d":"46089.900"},{"v":11.3272,"d":"11.327"},{"v":-0.678436,"d":"-0.678"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",null,"plastid",null,"cytosol","plastid",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G21330.2"]
["Os12t0181300-00","Rice","Similar to TRAF-type zinc finger family protein. (Os12t0181300-00)","12",335,{"v":38280,"d":"38280.000"},{"v":5.65931,"d":"5.659"},{"v":-0.502687,"d":"-0.503"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT3G11950.3"]
["Os12t0183300-01","Rice","Hal2-like protein, HAL2 HomologSimilar to 3'(2'),5'-bisphosphate nucleotidase. (Os12t0183300-01)","12",200,{"v":20729.5,"d":"20729.500"},{"v":4.6754,"d":"4.675"},{"v":-1E-3,"d":"-0.001"},"plasma membrane","extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plastid",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",{"$nulls":3},"cytosol","msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016","AT5G63980.1"]
["Os12t0191200-01","Rice","Hypothetical conserved gene. (Os12t0191200-01)","12",77,{"v":8905.62,"d":"8905.620"},{"v":12.5019,"d":"12.502"},{"v":-1.49091,"d":"-1.491"},"nucleus","mitochondrion,cytosol,plastid,nucleus","nucleus",null,null,"mitochondrion","cytosol","nucleus",null,"plastid",null,"plastid","nucleus","nucleus"]
["Os12t0195100-00","Rice","amino acid permease 11D, amino acid permease 12, amino acid/auxin permease 12Similar to amino acid permease. (Os12t0195100-00)","12",496,{"v":54529.1,"d":"54529.100"},{"v":12.0331,"d":"12.033"},{"v":0.0245968,"d":"0.025"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","plastid",null,null,"mitochondrion","cytosol","plasma membrane,nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","mitochondrion",null,"plastid","plastid","plastid",null,null,"AT1G44100.1"]
["Os12t0210200-01","Rice","ZETA GLUTATHIONE S-TRANSFERASE 1Similar to Glutathione S-transferase GST 18 (EC 2.5.1.18). (Os12t0210200-01)","12",214,{"v":23948.9,"d":"23948.900"},{"v":6.76649,"d":"6.766"},{"v":-0.157477,"d":"-0.157"},"cytosol","mitochondrion,cytosol,nucleus","nucleus",null,"cytosol","mitochondrion","cytosol","cytosol",null,"mitochondrion",null,null,"cytosol","cytosol",null,null,"AT2G02380.1"]
["Os12t0219700-01","Rice","Hypothetical protein. (Os12t0219700-01)","12",117,{"v":12354.2,"d":"12354.200"},{"v":6.07129,"d":"6.071"},{"v":-0.149573,"d":"-0.150"},"cytosol","mitochondrion,cytosol,plasma membrane,nucleus","nucleus",{"$nulls":3},"cytosol","plasma membrane,nucleus",null,"mitochondrion",{"$nulls":3},"cytosol",null,null,"AT2G11620.1"]
["Os12t0225200-01","Rice","Conserved hypothetical protein. (Os12t0225200-01)","12",146,{"v":15086.1,"d":"15086.100"},{"v":10.4365,"d":"10.437"},{"v":-0.212329,"d":"-0.212"},"cytosol","mitochondrion,cytosol,plastid,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,"plastid","nucleus","cytosol",null,null,"AT2G43950.2"]
["Os12t0285100-01","Rice","Hypothetical conserved gene. (Os12t0285100-01);Conserved hypothetical protein. (Os12t0285100-02);Conserved hypothetical protein. (Os12t0285100-03);Hypothetical conserved gene. (Os12t0285100-04)","12",78,{"v":8275.75,"d":"8275.750"},{"v":10.7375,"d":"10.738"},{"v":0.117949,"d":"0.118"},"plastid","plasma membrane,peroxisome,plastid","plastid",null,null,"plastid","peroxisome","plasma membrane,plastid",null,"plastid","peroxisome","plastid",null,"plastid",null,null,"AT1G73490.1"]
["Os12t0285100-02","Rice","Hypothetical conserved gene. (Os12t0285100-01);Conserved hypothetical protein. (Os12t0285100-02);Conserved hypothetical protein. (Os12t0285100-03);Hypothetical conserved gene. (Os12t0285100-04)","12",943,{"v":105176,"d":"105176.000"},{"v":6.56811,"d":"6.568"},{"v":-0.15281,"d":"-0.153"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid",null,"plastid",null,"plastid",null,"plastid",null,null,"AT5G18980.1"]
["Os12t0285100-03","Rice","Hypothetical conserved gene. (Os12t0285100-01);Conserved hypothetical protein. (Os12t0285100-02);Conserved hypothetical protein. (Os12t0285100-03);Hypothetical conserved gene. (Os12t0285100-04)","12",{"v":1087,"d":"1,087"},{"v":120916,"d":"120916.000"},{"v":7.24973,"d":"7.250"},{"v":-0.215547,"d":"-0.216"},"plastid","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","plastid",null,"plastid",null,"plastid",null,"plastid",null,null,"AT5G18980.1"]
["Os12t0285100-04","Rice","Hypothetical conserved gene. (Os12t0285100-01);Conserved hypothetical protein. (Os12t0285100-02);Conserved hypothetical protein. (Os12t0285100-03);Hypothetical conserved gene. (Os12t0285100-04)","12",711,{"v":79821.6,"d":"79821.600"},{"v":5.44918,"d":"5.449"},{"v":-0.28692,"d":"-0.287"},"endoplasmic reticulum","mitochondrion,plasma membrane,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,peroxisome,plastid","nucleus",null,null,"mitochondrion","endoplasmic reticulum","plastid,nucleus",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"peroxisome",null,null,"AT5G18980.2"]
["Os12t0286200-01","Rice","Conserved hypothetical protein. (Os12t0286200-01)","12",160,{"v":17766.6,"d":"17766.600"},{"v":4.72683,"d":"4.727"},{"v":-0.75625,"d":"-0.756"},"nucleus","cytosol,plastid,nucleus","nucleus",null,null,"plastid","cytosol","nucleus",null,"plastid",null,null,"nucleus","nucleus",null,null,"AT4G21670.1"]
["Os12t0414900-00","Rice","Similar to Endonuclease/Exonuclease/phosphatase family protein, expressed. (Os12t0414900-00)","12",498,{"v":54874.1,"d":"54874.100"},{"v":8.2295,"d":"8.230"},{"v":-0.377711,"d":"-0.378"},"plastid","mitochondrion,extracellular,nucleus,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"cytosol","plastid","cytosol","nucleus","plastid","mitochondrion",null,"plastid","plastid","vacuole",null,null,"AT1G11800.1"]
["Os12t0450500-01","Rice","Hypothetical conserved gene. (Os12t0450500-01)","12",76,{"v":8641.29,"d":"8641.290"},{"v":9.07634,"d":"9.076"},{"v":-1.12105,"d":"-1.121"},"nucleus","mitochondrion,cytosol,nucleus","nucleus",{"$nulls":3},"cytosol","nucleus",null,"mitochondrion",null,null,"nucleus","nucleus",null,null,"AT1G68050.1"]
["Os12t0479900-01","Rice","Similar to aminopeptidase. (Os12t0479900-01)","12",510,{"v":59327.4,"d":"59327.400"},{"v":5.6866,"d":"5.687"},{"v":-0.292549,"d":"-0.293"},"plasma membrane","mitochondrion,nucleus,cytosol,plasma membrane,plastid","cytosol",{"$nulls":3},"cytosol","plastid",null,"mitochondrion",null,null,"plasma membrane","nucleus","msms:golgi:25047511,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,25047511:Yanli:Y:Nie,Feifei:F:Huang,Shujun:S:Dong,Lin:L:Li,Ping:P:Gao,Heping:H:Zhao,Yingdian:Y:Wang,Shengcheng:S:Han:2014","AT3G19340.1"]
["Os12t0484700-01","Rice","Similar to Yippee-like protein CG15309. (Os12t0484700-01)","12",109,{"v":12717.3,"d":"12717.300"},{"v":8.12271,"d":"8.123"},{"v":-0.354128,"d":"-0.354"},"cytosol","mitochondrion,cytosol,plastid,nucleus","plastid",null,"nucleus",null,"cytosol","nucleus","plastid","mitochondrion",null,null,"cytosol","cytosol",null,null,"AT4G27745.4"]
["Os12t0510000-01","Rice","Conserved hypothetical protein. (Os12t0510000-01);Conserved hypothetical protein. (Os12t0510000-02)","12",85,{"v":8870.64,"d":"8870.640"},{"v":10.4645,"d":"10.465"},{"v":-0.381176,"d":"-0.381"},"plastid","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","plastid","plastid,nucleus",null,"plastid",null,"plastid",null,"cytosol",null,null,"AT3G14490.1"]
["Os12t0510000-02","Rice","Conserved hypothetical protein. (Os12t0510000-01);Conserved hypothetical protein. (Os12t0510000-02)","12",146,{"v":15882.4,"d":"15882.400"},{"v":9.53232,"d":"9.532"},{"v":-0.0410959,"d":"-0.041"},"cytosol","mitochondrion,extracellular,endoplasmic reticulum,cytosol,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"extracellular",null,"cytosol","plastid",null,"mitochondrion",null,null,"plastid","cytosol",null,null,"AT2G27200.1"]
["Os12t0530000-01","Rice","Similar to Histone H2A. (Os12t0530000-01)","12",138,{"v":14340.3,"d":"14340.300"},{"v":10.8553,"d":"10.855"},{"v":-0.261594,"d":"-0.262"},"nucleus","mitochondrion,plastid,nucleus","nucleus",null,"nucleus","mitochondrion","nucleus","nucleus",null,"mitochondrion",null,"plastid","nucleus","mitochondrion","msms:nucleus:18022940,msms:nucleus:19621931,msms:nucleus:23777608,msms:nucleus:26035336,msms:plastid:27992503","18022940:Feng:F:Tan,Guosheng:G:Li,Brahmananda Reddy:BR:Chitteti,Zhaohua:Z:Peng:2007,23777608:Hana:H:Mujahid,Feng:F:Tan,Jian:J:Zhang,Babi Ramesh Reddy:BR:Nallamilli,Ken:K:Pendarvis,Zhaohua:Z:Peng:2013,26035336:Ming:M:Li,Xiaojian:X:Yin,Katsumi:K:Sakata,Pingfang:P:Yang,Setsuko:S:Komatsu:2015,27992503:Shihai:S:Xing,Xiaoxi:X:Meng,Lihui:L:Zhou,Hana:H:Mujahid,Chunfang:C:Zhao,Yadong:Y:Zhang,Cailin:C:Wang,Zhaohua:Z:Peng:2016,19621931:Toshihiko:T:Aki,Shuichi:S:Yanagisawa:2009","AT1G54690.1"]
["Os12t0563200-01","Rice","THERMO-SENSITIVE CHLOROPHYLL-DEFICIENT MUTANT 11Plastid ribosomal small subunit protein S6, Chloroplast development at low temperature (Os12t0563200-01)","12",317,{"v":37047.7,"d":"37047.700"},{"v":4.8029,"d":"4.803"},{"v":-0.967192,"d":"-0.967"},"plastid","mitochondrion,cytosol,plastid,nucleus",null,"plastid",null,"plastid","plastid",null,null,"mitochondrion",null,"mitochondrion","cytosol","nucleus",null,null,"AT3G17170.1"]
["Os12t0584200-01","Rice","Similar to cDNA clone:J013075O22, full insert sequence. (Os12t0584200-01);Conserved hypothetical protein. (Os12t0584200-02)","12",220,{"v":24734.2,"d":"24734.200"},{"v":8.9941,"d":"8.994"},{"v":0.0427273,"d":"0.043"},"mitochondrion","mitochondrion,plasma membrane,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","nucleus",null,"mitochondrion",null,"mitochondrion","plastid","plasma membrane",null,null,"AT1G78530.2"]
["Os12t0584200-02","Rice","Similar to cDNA clone:J013075O22, full insert sequence. (Os12t0584200-01);Conserved hypothetical protein. (Os12t0584200-02)","12",154,{"v":17438.3,"d":"17438.300"},{"v":10.8085,"d":"10.809"},{"v":-0.542857,"d":"-0.543"},"mitochondrion","mitochondrion,cytosol,plastid,nucleus","plastid",null,null,"mitochondrion","mitochondrion","plastid,nucleus",null,"mitochondrion",null,"mitochondrion","nucleus","cytosol",null,null,"AT1G78530.2"]
["Os12t0601200-01","Rice","Uridine kinase family protein. (Os12t0601200-01);Similar to ATP binding protein. (Os12t0601200-02)","12",315,{"v":35501.6,"d":"35501.600"},{"v":7.93136,"d":"7.931"},{"v":-0.360952,"d":"-0.361"},"plastid","mitochondrion,plastid","plastid",null,null,"mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid","msms:plastid:17189339","17189339:Torsten:T:Kleffmann,Anne:A:von Zychlinski,Doris:D:Russenberger,Matthias:M:Hirsch-Hoffmann,Peter:P:Gehrig,Wilhelm:W:Gruissem,Sacha:S:Baginsky:2007","AT1G03030.1"]
["Os12t0601200-02","Rice","Uridine kinase family protein. (Os12t0601200-01);Similar to ATP binding protein. (Os12t0601200-02)","12",226,{"v":25096.1,"d":"25096.100"},{"v":8.47327,"d":"8.473"},{"v":-0.380973,"d":"-0.381"},"plastid","mitochondrion,plastid","plastid",null,null,"mitochondrion","plastid","plastid","plastid","plastid",null,"plastid","plastid","plastid",null,null,"AT1G03030.2"]
["Os12t0639600-01","Rice","Similar to Hedgehog-interacting-like protein. (Os12t0639600-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0639600-02)","12",159,{"v":17463.6,"d":"17463.600"},{"v":9.28673,"d":"9.287"},{"v":0.422013,"d":"0.422"},"extracellular","mitochondrion,extracellular,nucleus,endoplasmic reticulum,vacuole,golgi,plasma membrane,plastid","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","nucleus","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","plastid","extracellular","msms:extracellular:24083427,msms:plasma membrane:27800704","27800704:Jidong:J:Cao,Chao:C:Yang,Lingjuan:L:Li,Lan:L:Jiang,Yao:Y:Wu,Chuanwan:C:Wu,Qingyun:Q:Bu,Guixian:G:Xia,Xiaoyun:X:Liu,Yuanming:Y:Luo,Jun:J:Liu:2016,24083427:Takuro:T:Shinano,Tomoko:T:Yoshimura,Toshihiro:T:Watanabe,Yusuke:Y:Unno,Mitsuru:M:Osaki,Yohei:Y:Nanjo,Setsuko:S:Komatsu:2013","AT1G74790.1"]
["Os12t0639600-02","Rice","Similar to Hedgehog-interacting-like protein. (Os12t0639600-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0639600-02)","12",694,{"v":74212.9,"d":"74212.900"},{"v":5.09541,"d":"5.095"},{"v":-0.243228,"d":"-0.243"},"extracellular,vacuole,golgi","mitochondrion,extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"golgi","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular","plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane","extracellular,endoplasmic reticulum,vacuole,golgi,plasma membrane",null,"mitochondrion","golgi","vacuole",null,null,"AT1G74790.1"]

{"sheet":"Table S9 List of Interactors","index":8,"n_rows":1814,"n_cols":13,"rows_kept":1814}
["Supplementary Table S9. List of interactors associated with protein-protein interaction network of RGA1-regulated N-responsive genes in rice."]
[]
[null,"Interactor A","Description","Symbol",null,"Interactor B","Description","Symbol",null,"Interactor_DEG","Description","Symbol","Log2FC"]
[null,"Os03g0819900","small GTP-binding protein OsRab8A5","OsRab8A5",null,"Os02g0709800","GTPase-activating protein","Os02g0709800",null,"Os01g0136100","16.9 kDa class I heat shock protein 1, 16.9 kDa heat shock protein 1","HSP16.9A",1.1323583]
[null,"Os07g0239400","small GTP-binding protein OsRab8A3","OsRab8A3",null,"Os02g0709800","GTPase-activating protein","Os02g0709800",null,"Os01g0180300","MAR binding protein, matrix attachment region binding protein","Os01g0180300",4.0132523]
[null,"Os05g0498300","MutS-homolog 5","MSH5",null,"Os07g0486000","the rice homolog of MSH4, MutS-homolog 4","Os07g0486000",null,"Os01g0191200","Similar to Acid phosphatase.","Os01g0191200",4.77526]
[null,"Os07g0176600","NIMA-related kinase 3","OsSTA192",null,"Os10g0503100","Similar to Transcription factor L2.","Os10g0503100",null,"Os01g0253300","Importin alpha-1a subunit.","Os01g0253300",-1.3360729]
[null,"Os06g0551400","small GTP-binding protein OsRab11D1","OsRab11D1",null,"Os02g0709800","GTPase-activating protein","Os02g0709800",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11",-1.3830872]
[null,"Os03g0232600","ERECT LEAF1, erect leaf1, plant U-box-containing protein 75, U-box protein 75, Taihu Dwarf1, Dwarf and short grain 1","ELF1",null,"UBE2D2","UBE2D2","UBE2D2",null,"Os01g0267900","Calmodulin 1-3, calmodulin 1","OsCaM1-3",-1.2781839]
[null,"Os03g0749300","periplasmic beta-glucosidase 1","OsBGLU1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0279100","Mg-Proto IX monomethylester cyclase, yellow-green leaf 8, Copper Response Defect 1, Yellow-Leaf 1, PHARBITIS NIL LEUCINE ZIPPER","YL1",4.5274267]
[null,"Os03g0819900","small GTP-binding protein OsRab8A5","OsRab8A5",null,"Os02g0709800","GTPase-activating protein","Os02g0709800",null,"Os01g0279300","calmodulin 3","CAM3",-1.8351812]
[null,"Os07g0657200","WD40/YVTN repeat-like domain containing protein.","Os07g0657200",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A",-1.4427261]
[null,"Os08g0345800","ADP-glucose pyrophosphorylase small subunit 2a","OsAGPS2a",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900",-1.670147]
[null,"Os02g0753300","Lipoxygenase, LH2 domain containing protein.","Os02g0753300",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0600900","Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",4.4830627]
[null,"Os12g0297500","Pyruvate phosphate dikinase","Os12g0297500",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0621900","ILA1 interacting protein 1","ILA1",-1.5590401]
[null,"Os07g0468100","Similar to Glutathione S-transferase GST 19","GSTU46",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0654500","isocitrate dehydrogenase, isocitrate dehydrogenase (NADP+)","ICDH",-1.3838072]
[null,"Os03g0843300","late embryogenesis abundant protein 7","LEA7",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0678600","Ribosomal protein S20 family protein.","Os01g0678600",3.0867295]
[null,"Os04g0583600","Similar to Histone H4.","Os04g0583600",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700",-1.0773993]
[null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein)","Os03g0227000",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",8.395962]
[null,"Os05g0401100","Protein of unknown function DUF477 family protein.","Os05g0401100",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900",-1.5745783]
[null,"Os08g0126300","glyceraldehydes-3-phosphate dehydrogenase, cytosolic GAPDH3, cytosolic glyceraldehyde-3-phosphate dehydrogenase 3","GAPC",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0743400","Similar to Tryptophanyl-tRNA synthetase (Fragment).","Os01g0743400",2.585658]
[null,"Os06g0623300","NAD(P)-binding domain containing protein.","Os06g0623300",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","RPL13",3.258029]
[null,"Os06g0289900","C-pentosyl flavone pentosyltransferase, anthocyanidin 3-O-glucosyltransferase","UGT",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300",-1.3275356]
[null,"Os02g0744900","Geranylgeranyl reductase, Light-Induced Yellow Leaf 1, Geranylgeranyl Reductase I, Geranylgeranyl-diphosphate reductase, geranylgeranyl reductase 1","LYL1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700",-0.9036417]
[null,"Os05g0496200","Similar to 3-phosphoglycerate kinase (Fragment).","Os05g0496200",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",3.4080095]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100",-2.0155182]
[null,"Os08g0104600","Ferredoxin I, ferredoxin, ferredoxin 1, anti-disease protein 1","Fd1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0846800","Regulator of chromosome condensation","Os01g0846800",-1.5701623]
[null,"Os01g0279300","calmodulin 3","CAM3",null,"ROC2","ROC2","ROC2",null,"Os01g0852200","phosphate transporter 22","PT22",2.1086845]
[null,"Os06g0168600","virescent3, virescent 3, virescent-3, ribonucleotide reductase large subunit 1, RIBONUCLEOTIDE REDUCTASE 1","V3",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0878900","4, 5-DOPA DIOXYGENASE EXTRADIOL-LIKE PROTEIN","Os01g0878900",11.592693]
[null,"Os03g0425000","Similar to predicted protein.","Os03g0425000",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0905800","cytoplast aldolase-1, aldolase isozyme C-1, aldolase C-1, cytoplasmic aldolase C-1","ALDC1",-1.4006462]
[null,"Os02g0169300","\\phosphoglycerate kinase, cytosolic\\\", Phosphoglycerate kinase 2, phosphoglycerate kinase-2, Phosphoglycerate kinase protein\"","PGK2",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200",-1.580904]
[null,"Os03g0563300","Magnesium-chelatase subunit chlI, magnesium chelatase subunit ChlI, MgCh I subbing, Mg-chelatase I subunit, etiolated leaf and lethal","ELL",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","RPL27",2.6026192]
[null,"Os01g0878900","4, 5-DOPA DIOXYGENASE EXTRADIOL-LIKE PROTEIN","Os01g0878900",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0924800","ribosomal protein","Os01g0924800",-1.1435261]
[null,"Os06g0472400","Similar to Transcriptional regulator.","Os06g0472400",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0956600","Nucleotide-binding, alpha-beta plait domain containing protein.","Os01g0956600",3.5727186]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os01g0963400","Thioredoxin family protein.","Os01g0963400",2.0529957]
[null,"Os03g0679700","HMP-P synthase","OsTHIC",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",-1.7096586]
[null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0113200","Cytochrome P450 51H5","CYP51H5",4.0967813]
[null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os09g0532000","stay green leaf (t), stay green, staying green during senescence, Stay-Green","SGR",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10","Os02g0114700",-1.3405414]
[null,"Os05g0382600","Annexin 3","ANN3",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0115700","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A","CATA",2.6157532]
[null,"Os05g0460600","Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).","Os05g0460600",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0122300","brassinosteroid receptor kinase (BRI1)-interacting protein 121, BRI1-interacting protein 121, brassinosteroid receptor kinase-interacting protein 121","Os02g0122300",-1.4019957]
[null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0125000","Similar to LPA2 (low psii accumulation2).","Os02g0125000",1.4692016]
[null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0125700","light-harvesting-like protein 3","_",3.0383148]
[null,"Os02g0125700","light-harvesting-like protein 3","_",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0134300","Transcription Elongation Factor 1","Os02g0134300",-2.8248005]
[null,"Os01g0191200","Similar to Acid phosphatase.","Os01g0191200",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",2.6834087]
[null,"Os03g0439500","2-oxoglutarate-dependent dioxygenase 25","2ODD25",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0137800","Heterotrimeric G protein gamma subunit 2","Os02g0137800",-1.3723431]
[null,"Os05g0498300","MutS-homolog 5","MSH5",null,"Os07g0486000","the rice homolog of MSH4, MutS-homolog 4","Os07g0486000",null,"Os02g0169300","\\phosphoglycerate kinase, cytosolic\\\", Phosphoglycerate kinase 2, phosphoglycerate kinase-2, Phosphoglycerate kinase protein\"","PGK2",-1.2939968]
[null,"Os07g0212200","Similar to MRNA-binding protein (Fragment).","Os07g0212200",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",-1.257534]
[null,"Os02g0623500","Lysyl-tRNA synthetase, class II domain containing protein.","Os02g0623500",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0181900","class I Clp ATPase B-M, ClpB-mitochondrial, ClpB/Hsp100 mitochondrial isoform","CLPB-M",-2.4691358]
[null,"Os03g0309800","Similar to PPR2.","Os03g0309800",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500",-1.4508104]
[null,"Os07g0548300","Hypothetical conserved gene.","Os07g0548300",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",2.4804592]
[null,"Os02g0668100","geranylgeranyl diphosphate synthase 2, GGPPS recruiting protein, GGPS recruiting protein","GGPPS2",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0190600","lycopene e-cyclase, lycopene beta-cyclase","OsLCYb",1.471303]
[null,"Os11g0210300","Alcohol dehydrogenase1, Alcohol dehydrogenase 1, Alcohol dehydrogenase-1, reduced adh activity, Alcohol dehydrogenase I","ADH1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0192700","peroxiredoxin IIE2, Type-II Prx E2, Type-II peroxiredoxin E2","PRXIIE2",8.690219]
[null,"Os01g0279100","Mg-Proto IX monomethylester cyclase, yellow-green leaf 8, Copper Response Defect 1, Yellow-Leaf 1, PHARBITIS NIL LEUCINE ZIPPER","YL1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",4.0713425]
[null,"Os01g0136100","16.9 kDa class I heat shock protein 1, 16.9 kDa heat shock protein 1","HSP16.9A",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000",-1.4807906]
[null,"Os04g0650800","3-phosphoglycerate dehydrogenase 1","PGDH1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0220500","elongation factor 1-gamma","EF1G",-1.4398212]
[null,"Os02g0190600","lycopene e-cyclase, lycopene beta-cyclase","OsLCYb",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0245100","Similar to Peroxisomal targeting signal type 2 receptor.","Os02g0245100",-1.1346097]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",4.0619245]
[null,"Os06g0704700","NAD(P)-binding domain containing protein.","Os06g0704700",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",-1.2429314]
[null,"Os07g0630800","Similar to Nodule-enhanced malate dehydrogenase.","Os07g0630800",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0506500","Similar to ubiquitin-activating enzyme E1 domain-containing protein 1.","Os02g0506500",-1.5221386]
[null,"Os12g0175500","glutaredoxin 27","GRX27",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0510200","acetolactate synthase, acetohydroxyacid synthase","ALS",1.5419798]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os09g0532000","stay green leaf (t), stay green, staying green during senescence, Stay-Green","SGR",null,"Os02g0519900","elongation factor 2","Os02g0519900",-1.1611719]
[null,"Os06g0551400","small GTP-binding protein OsRab11D1","OsRab11D1",null,"Os02g0709800","GTPase-activating protein","Os02g0709800",null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",2.925643]
[null,"Os09g0542000","Similar to Ribonuclease P.","Os09g0542000",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0562700","gamma hydroxybutyrate dehydrogenase, glyoxylate/succinic semialdehyde reductase 1, glyoxylate reductase 1","GLYR1",1.4100366]
[null,"Os05g0568900","Deg protease 9, DEG PROTEASE 9","OsDegp9",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",3.5515232]
[null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0601300","glyceraldehydephosphate dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1","GAPC1",-1.5866451]
[null,"Os09g0411650","SET protein 36","Os09g0411650",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0623500","Lysyl-tRNA synthetase, class II domain containing protein.","Os02g0623500",1.6854453]
[null,"Os01g0654500","isocitrate dehydrogenase, isocitrate dehydrogenase (NADP+)","ICDH",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2",-1.5904055]
[null,"Os02g0704000","Carotenoid-cleavage dioxygenase","Os02g0704000",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",4.391887]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0668100","geranylgeranyl diphosphate synthase 2, GGPPS recruiting protein, GGPS recruiting protein","GGPPS2",-2.5988054]
[null,"Os02g0601300","glyceraldehydephosphate dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1","GAPC1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0668500","Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.","Os02g0668500",1.890233]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0704000","Carotenoid-cleavage dioxygenase","Os02g0704000",-1.8582325]
[null,"Os08g0558200","glutaredoxin 20","GRX20",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0726300","Dof zinc factor 8, Dof transcription factor 8","DOF4",3.8029904]
[null,"Os02g0510200","acetolactate synthase, acetohydroxyacid synthase","ALS",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0740300","ATPase, AAA-type, core domain containing protein.","Os02g0740300",-1.8298397]
[null,"Os09g0433600","Similar to Histone H4.","Os09g0433600",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0744900","Geranylgeranyl reductase, Light-Induced Yellow Leaf 1, Geranylgeranyl Reductase I, Geranylgeranyl-diphosphate reductase, geranylgeranyl reductase 1","LYL1",4.247592]
[null,"Os01g0905800","cytoplast aldolase-1, aldolase isozyme C-1, aldolase C-1, cytoplasmic aldolase C-1","ALDC1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0747400","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 9","TCP9",4.1408963]
[null,"Os03g0599800","UDP-Arabinopyranose Mutase 1, reversibly glycosylated polypeptide-1","UAM1",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0753300","Lipoxygenase, LH2 domain containing protein.","Os02g0753300",2.1986742]
[null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os05g0333200","daikoku dwarf, XANTHOMONAS CAMPESTRIS PV. ORYZAE RESISTANCE 7, dwarf-1, Guanine nucleotide-binding protein alpha-1 subunit, GP-alpha-1, Protein Dwarf1, G-protein alpha subunit, GP-alpha-1, G-protein alpha subunit 1, dwarf69, dwarf 69, GTP binding protein alpha-subunit, dwarf 89, rice G protein a subunit 1, G protein a subunit 1","RGA1",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",2.8404865]
[null,"Os07g0678600","CBL-interacting protein kinase 2, Sucrose nonfermenting-1-related protein kinase 3.26","CIPK02",null,"LOC_Os03g36300","retrotransposon protein, putative","LOC_Os03g36300",null,"Os02g0761200","Armadillo-like helical domain containing protein.","Os02g0761200",-2.6465092]
[null,"Os07g0479100","RING finger protein OsRFPH2-17, RING-H2 protein 17","OsRFPH2-17",null,"Os05g0543200","Similar to Ran GTPase activating protein.","Os05g0543200",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",-1.8053455]
[null,"Os03g0841800","GSK3/SHAGGY-Like Kinase 41, QTL FOR THOUSAND GRAIN WEIGHT ON CHROMOSOME 3, GSK3-like Kinase 5, Glycogen Synthase Kinase-like 5, thousand grain weight 3","GSK3",null,"Os02g0693000","Conserved hypothetical protein.","Os02g0693000",null,"Os02g0801700","Zinc finger, BED-type predicted domain containing protein.","Os02g0801700",1.6393838]
[null,"Os11g0113700","CBL-interacting protein kinase 15, Sucrose nonfermenting-1-related protein kinase 3.31","CIPK15",null,"Os12g0162400","Calcineurin B-like protein 6","CBL6",null,"Os02g0817200","Similar to actin-related protein 2/3 complex subunit 1B.","Os02g0817200",-1.7838774]
[null,"Os03g0121700","NAC-like protein, nascent polypeptide-associated complex alpha chain","Os03g0121700",null,"Os03g0109600","BTF3a RNA pol B, BTF3a RNA polymerase B, Transcription factor BTF3a","Os03g0109600",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",2.4886518]
[null,"Os10g0389800","leucine-rich repeat kinase","Os10g0389800",null,"Os12g0555500","Pathogen resistance protein PBZ1","Os12g0555500",null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","CDC2-1",0.8553748]
[null,"Os02g0726300","Dof zinc factor 8, Dof transcription factor 8","DOF4",null,"Os07g0558500","thylakoid formation1","NYC4",null,"Os03g0121700","NAC-like protein, nascent polypeptide-associated complex alpha chain","Os03g0121700",3.431816]
[null,"Os04g0490500","Receptor-like Cytoplasmic Kinase 152","RLCK152",null,"Os05g0515700","vascular plant one zinc finger protein 2","VOZ2",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",3.6734686]
[null,"Os06g0133000","glutinous endosperm, waxy, Waxy, WAXY, \\Granule-bound starch synthase 1, chloroplastic/amyloplastic\\\", Granule-bound starch synthase I, UDP-glycogen synthase, \\\"Granule-bound starch synthase, chloroplast precursor\\\", glycogen [starch] synthase, Granule-bound glycogen synthase, UDPG-glycogen transglucosylase, uridine diphosphoglucose-glycogen glucosyltransferase, glycogen [starch] synthetase, Granule-bound glycogen [starch] synthase, UDPG-glycogen synthetase, granule bound starch synthase I, granule-bound starch synthase 1, granule-bound starch synthase I\"","WX1",null,"Os03g0791800","RAD6 DNA-repair homolog Dhr6, Ubiquitin-conjugating enzyme 9","OsRad6",null,"Os03g0123300","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1","TAD1",1.2609701]
[null,"Os03g0782500","phytochrome-interacting factor-like protein 1, PIF-like gene 1, PHYTOCHROME INTERACTING FACTOR-LIKE 13, basic helix-loop-helix protein 152, Phytochrome-interacting factor 7","PIL13",null,"Os02g0618200","Two-component response regulator-like PRR1, Pseudo-response regulator 1, A-type RR 21, CCT domain-containing gene 7, CCT (CO, CO-LIKE and TOC1) domain protein 7, CCT domain protein 7","TOC1",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",3.7143974]
[null,"Os04g0567800","Similar to OSIGBa0103M18.3 protein.","Os04g0567800",null,"Os02g0603800","1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, HMBDP synthase","OsHDS",null,"Os03g0130500","EF hand domain containing protein.","Os03g0130500",-1.4386024]
[null,"Os06g0712700","SUPERWOMAN1/OsMADS16, SUPERWOMAN1, superwoman-1, MADS-box transcription factor 16, Protein SUPERWOMAN1, Protein APETALA3-like","SPW1",null,"Os11g0160500","b-ZIP transcription factor 81","BZIP81",null,"Os03g0131900","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3","YGL9",5.456401]
[null,"Os05g0227600","REPETITIVE PROLINE-RICH PROTEIN 1.2","Os05g0227600",null,"Os04g0568900","Similar to RING finger protein 6 (RING-H2 protein).","Os04g0568900",null,"Os03g0151700","Similar to WD repeat protein (Fragment).","Os03g0151700",-1.3684459]
[null,"Os12g0291400","RuBisCO small subunit 5, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 5","RBCS5",null,"Os12g0102500","Serine/threonine protein kinase-related domain containing protein.","Os12g0102500",null,"Os03g0162200","Similar to Histone H2A.","Os03g0162200",4.775845]
[null,"Os12g0292400","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4","RBCS4",null,"Os12g0102500","Serine/threonine protein kinase-related domain containing protein.","Os12g0102500",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K",-1.2103682]
[null,"Os05g0533600","SOLUBLE STARCH SYNTHASE IV-2","SSIVB",null,"Os01g0633200","transcription factor X1, FACTOR OF DNA METHYLATION LIKE 3","Os01g0633200",null,"Os03g0194500","Similar to Protein translocase/ protein transporter.","Os03g0194500",-1.7388468]
[null,"Os01g0852200","phosphate transporter 22","PT22",null,"Os04g0397000","defender against apoptotic death 1","DAD1",null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",-1.9565649]
[null,"Os01g0180300","MAR binding protein, matrix attachment region binding protein","Os01g0180300",null,"Os01g0296000","Receptor-like Cytoplasmic Kinase 30","RLCK30",null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",-1.2397909]
[null,"Os01g0743400","Similar to Tryptophanyl-tRNA synthetase (Fragment).","Os01g0743400",null,"Os08g0124000","Lectin protein kinase domain-containing protein","Os08g0124000",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",-2.3153133]
[null,"Os02g0562700","gamma hydroxybutyrate dehydrogenase, glyoxylate/succinic semialdehyde reductase 1, glyoxylate reductase 1","GLYR1",null,"Os09g0425900","Similar to senescence-associated protein DH.","Os09g0425900",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B",-1.1941586]
[null,"Os10g0555700","Expansin-B2, Beta-expansin-2","EXPB2",null,"Os04g0397000","defender against apoptotic death 1","DAD1",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",2.5136557]
[null,"Os02g0801700","Zinc finger, BED-type predicted domain containing protein.","Os02g0801700",null,"Os12g0102500","Serine/threonine protein kinase-related domain containing protein.","Os12g0102500",null,"Os03g0225600","Conserved oligomeric complex COG6 family protein.","Os03g0225600",-1.7792697]
[null,"Os12g0605100","Conserved hypothetical protein.","Os12g0605100",null,"Os03g0318600","bZIP transcription factor 28, bZIP transcription factor 1","BZIP28",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein)","Os03g0227000",-1.5970345]
[null,"Os12g0274700","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"","RBCS2",null,"Os12g0102500","Serine/threonine protein kinase-related domain containing protein.","Os12g0102500",null,"Os03g0232600","ERECT LEAF1, erect leaf1, plant U-box-containing protein 75, U-box protein 75, Taihu Dwarf1, Dwarf and short grain 1","ELF1",2.4017239]
[null,"Os05g0491200","b-subunit of SnRK1, beta-subunit of SnRK1","Os05g0491200",null,"Os05g0530500","Similar to OSK1.","Os05g0530500",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",-1.2327118]
[null,"Os03g0637900","Similar to Centromere protein-like protein","Os03g0637900",null,"Os03g0318600","bZIP transcription factor 28, bZIP transcription factor 1","BZIP28",null,"Os03g0261900","Similar to HEAT repeat family protein, expressed.","Os03g0261900",-1.445612]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0805200","proliferating cell nuclear antigen, Proliferating-cell nuclear antigen, DNA polymerase delta auxiliary protein, cyclin","PCNA",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",3.1458426]
[null,"Os01g0253300","Importin alpha-1a subunit.","Os01g0253300",null,"Os03g0169600","CYCLING DOF FACTOR 1, Dof zinc factor 12, Dof transcription factor 12","RDD4",null,"Os03g0266200","enolase 3","OsEno3",-1.7044721]
[null,"Os03g0843500","Similar to Sarcoplasmic reticulum protein (With alternative splicing).","Os03g0843500",null,"Os01g0840900","Conserved hypothetical protein.","Os01g0840900",null,"Os03g0268100","Similar to T-snare.","Os03g0268100",-1.3063226]
[null,"Os05g0476700","arm repeat protein, plant U-box-containing protein 2, U-box protein 2","PUB2",null,"Os03g0318600","bZIP transcription factor 28, bZIP transcription factor 1","BZIP28",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",1.882721]
[null,"Os07g0558500","thylakoid formation1","NYC4",null,"Os02g0153700","leucine-rich receptor-like kinase 4, Phytosulfokine Receptor 6","LRK4",null,"Os03g0278900","F-type ATPase b, ATP synthase subunit b","Os03g0278900",2.4984388]
[null,"Os12g0169100","Protein of unknown function DUF869, ","Os12g0169100",null,"Os07g0575600","Similar to Lectin receptor-type kinase.","Os07g0575600",null,"Os03g0279200","Similar to Histone H2A.","Os03g0279200",2.58889]
[null,"Os04g0625000","Conserved hypothetical protein.","Os04g0625000",null,"Os01g0665200","MAP kinase 20-4, Wound- and JA-uninducible MAP kinase 1","WJUMK1",null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",3.0598993]
[null,"Os01g0267900","Calmodulin 1-3, calmodulin 1","OsCaM1-3",null,"Os03g0366200","CDPK-related kinase 1, Ca2+/calmodulin (CaM)-binding protein kinase, calmodulin-binding kinase","CRK1",null,"Os03g0296300","Similar to mitochondrial import inner membrane translocase subunit tim22.","Os03g0296300",-1.4303675]
[null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os02g0726300","Dof zinc factor 8, Dof transcription factor 8","DOF4",null,"Os03g0309800","Similar to PPR2.","Os03g0309800",2.4468474]
[null,"Os03g0648400","DnaJ domain protein A4, YDJ1 protein","YDJ1",null,"Os02g0822400","NAC domain-containing protein 070, NAC domain-containing protein 70, NAC membrane-bound transcription factor 6, NAC MTF6","NAC70",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",3.8782792]
[null,"Os03g0268100","Similar to T-snare.","Os03g0268100",null,"Os06g0712700","SUPERWOMAN1/OsMADS16, SUPERWOMAN1, superwoman-1, MADS-box transcription factor 16, Protein SUPERWOMAN1, Protein APETALA3-like","SPW1",null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX",2.2520866]
[null,"Os02g0137800","Heterotrimeric G protein gamma subunit 2","Os02g0137800",null,"Os03g0669200","heterotrimeric G protein beta 1 subunit, heterotrimeric G protein b-subunit 1, G protein beta subunit 1","RGB1",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",3.9889932]
[null,"Os10g0504600","myosin, SKIP interacting protein 24, SKIPa-interacting protein 24, SKIPa-interacting protein 24","Os10g0504600",null,"Os07g0575600","Similar to Lectin receptor-type kinase.","Os07g0575600",null,"Os03g0366000","Similar to Chaperonin.","Os03g0366000",-1.7779036]
[null,"Os04g0665800","Similar to H1005F08.12 protein.","Os04g0665800",null,"Os01g0201700","MADS box gene3, MADS-box transcription factor 3, Protein AGAMOUS-like","RAG",null,"Os03g0425000","Similar to predicted protein.","Os03g0425000",3.0854506]
[null,"Os03g0278900","F-type ATPase b, ATP synthase subunit b","Os03g0278900",null,"Os10g0521700","GSK3/SHAGGY-Like Kinase 31, GSK3-like Kinase 9","Os10g0521700",null,"Os03g0439500","2-oxoglutarate-dependent dioxygenase 25","2ODD25",2.12845]
[null,"Os08g0504700","Gibberellin-induced A20/AN1 zinc-finger protein","Os08g0504700",null,"Os08g0374600","Receptor-like Cytoplasmic Kinase 253","RLCK253",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",2.3735342]
[null,"Os01g0905800","cytoplast aldolase-1, aldolase isozyme C-1, aldolase C-1, cytoplasmic aldolase C-1","ALDC1",null,"Os04g0275100","Serine/threonine protein kinase-related domain containing protein.","Os04g0275100",null,"Os03g0563300","Magnesium-chelatase subunit chlI, magnesium chelatase subunit ChlI, MgCh I subbing, Mg-chelatase I subunit, etiolated leaf and lethal","ELL",3.8086576]
[null,"Os03g0786100","Glycolate oxidase 1","GLO1",null,"Os06g0486400","Serine/threonine protein kinase domain containing protein.","Os06g0486400",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500",4.629755]
[null,"Os08g0428400","Jasmonate ZIM-domain protein 9, Jasmonate ZIM-domain protein 3, Jasmonate Zim-Domain3","TIFY6A",null,"AK121543","AK121543","AK121543",null,"Os03g0599800","UDP-Arabinopyranose Mutase 1, reversibly glycosylated polypeptide-1","UAM1",-1.7078886]
[null,"Os05g0454200","bright green leaf, guanine nucleotide exchange factor for Rop 10, GEF for ROP 10, Rop-specific GEF10, Rop-specific guanine nucleotide exchange factor 10","BGL",null,"BAA84492","BAA84492","BAA84492",null,"Os03g0617500","D-type cyclin 5;2","CYCD5;2",2.9044046]
[null,"Os02g0181900","class I Clp ATPase B-M, ClpB-mitochondrial, ClpB/Hsp100 mitochondrial isoform","CLPB-M",null,"Os08g0546800","Heat stress transcription factor B2b, Heat stress transcription factor B-2b, Heat stress transcription factor 21, Heat stress transcription factor 2, rice HSF7 homolog","HSFB2B",null,"Os03g0637900","Similar to Centromere protein-like protein","Os03g0637900",3.7004428]
[null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","CDC2-1",null,"AAG16867","AAG16867","AAG16867",null,"Os03g0640100","Multicopy suppressors of the iral 1","Os03g0640100",-1.7058105]
[null,"Os03g0782500","phytochrome-interacting factor-like protein 1, PIF-like gene 1, PHYTOCHROME INTERACTING FACTOR-LIKE 13, basic helix-loop-helix protein 152, Phytochrome-interacting factor 7","PIL13",null,"BAD38854","BAD38854","BAD38854",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800",-2.6022935]
[null,"Os06g0662200","b-ZIP transcription factor 52, rice seed b-Zipper 5","RISBZ5",null,"Os09g0306400","b-ZIP transcription factor 71, DLN repressor 221, DLN motif protein 221, DLN repressor 222, DLN motif protein 222","BZIP71",null,"Os03g0648400","DnaJ domain protein A4, YDJ1 protein","YDJ1",-1.5934372]
[null,"Os01g0621900","ILA1 interacting protein 1","ILA1",null,"Os06g0724900","increased leaf angle1, ACT domain containing protein kinase 4, MAPK kinase kinase 43","ILA1",null,"Os03g0651100","Rhomboid 9, RHOMBOID 9","OsRhmbd9",-1.4194956]
[null,"Os09g0466100","Cyclin-D2-1, cyclinD2;1, Cyclin-D4-1, cyclinD4;1","CYCD4;1",null,"A2X9W8","A2X9W8","A2X9W8",null,"Os03g0669000","ATP-dependent RNA helicase DDX47, RNA helicase 10, thermotolerant growth required1","OsRH10",-1.5710664]
[null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os03g0679700","HMP-P synthase","OsTHIC",4.9000697]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",2.6170788]
[null,"Os07g0673550","Photosystem II protein PsbX family protein.","Os07g0673550",null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400",-1.6758056]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os03g0718100","Actin1, Actin-1, Actin1*(act1), actin 1, Actin 11","ACT1",-0.9064503]
[null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os03g0720300","GLU DECARBOXYLASE ISOZYME1, GLU DECARBOXYLASE ISOZYME 1, glutamate decarboxylase 1","Os03g0720300",1.5505676]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os03g0749300","periplasmic beta-glucosidase 1","OsBGLU1",2.01793]
[null,"Os12g0605800","3-methylcrotonyl CoA carboxylase biotin-containing subunit","OsL55",null,"Os08g0424200","Similar to Methylcrotonoyl-CoA carboxylase beta chain","Os08g0424200",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",4.388844]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800",-1.4382296]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os07g0673550","Photosystem II protein PsbX family protein.","Os07g0673550",null,"Os03g0766900","Allene oxide synthase.","Os03g0766900",-2.3567314]
[null,"Os08g0104600","Ferredoxin I, ferredoxin, ferredoxin 1, anti-disease protein 1","Fd1",null,"Os06g0107700","Leaf-type ferredoxin-NADP+-oxidoreductase","OsLFNR2",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",3.4210348]
[null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os03g0828100","Similar to 50S ribosomal protein L18","Os03g0828100",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",2.5723705]
[null,"Os03g0828100","Similar to 50S ribosomal protein L18, chloroplastic.","Os03g0828100",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os03g0780400","actin depolymerizing factor 2","ADF2",-1.669074]
[null,"Os07g0562700","Type III chlorophyll a/b-binding protein, PSII Cab type III","Os07g0562700",null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",null,"Os03g0782500","phytochrome-interacting factor-like protein 1, PIF-like gene 1, PHYTOCHROME INTERACTING FACTOR-LIKE 13, basic helix-loop-helix protein 152, Phytochrome-interacting factor 7","PIL13",2.3268466]
[null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os03g0783000","Similar to Actin-related protein 7.","Os03g0783000",-1.1996965]
[null,"Os03g0617500","D-type cyclin 5;2","CYCD5;2",null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","OsCDKA;1",null,"Os03g0786100","Glycolate oxidase 1","GLO1",1.4013481]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",2.6602182]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os03g0819900","small GTP-binding protein OsRab8A5","OsRab8A5",-1.1357341]
[null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",-1.8067007]
[null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os03g0828100","Similar to 50S ribosomal protein L18, chloroplastic.","Os03g0828100",3.9773073]
[null,"Os05g0313700","Conserved hypothetical protein.","Os05g0313700",null,"Os04g0580400","Ubiquitin-conjugating enzyme 3, E2 SUMO conjugation enzyme 1c, SUMO conjugation enzyme 1c, E2 protein SCE1c","UBC3",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700",-1.4725981]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os03g0836000","Actin 3","Os03g0836000",-1.4910593]
[null,"Os07g0673550","Photosystem II protein PsbX family protein.","Os07g0673550",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os03g0841800","GSK3/SHAGGY-Like Kinase 41, QTL FOR THOUSAND GRAIN WEIGHT ON CHROMOSOME 3, GSK3-like Kinase 5, Glycogen Synthase Kinase-like 5, thousand grain weight 3","GSK3",1.585747]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os03g0843300","late embryogenesis abundant protein 7","LEA7",-1.182291]
[null,"Os07g0673550","Photosystem II protein PsbX family protein.","Os07g0673550",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os03g0843500","Similar to Sarcoplasmic reticulum protein (With alternative splicing).","Os03g0843500",2.4239783]
[null,"Os05g0455500","delta1-pyrroline-5-carboxylate synthetase, Delta-1-pyrroline-5-carboxylate synthetase, pyrroline-5-carboxylate synthetase, proline carboxylate synthase 1, Aldehyde dehydrogenase 18B1","P5CS",null,"Os01g0805600","B-type cyclin 1;1","CYCB1;1",null,"Os03g0845300","Hypothetical conserved gene.","Os03g0845300",2.027762]
[null,"Os12g0291100","RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3","RBCS3",null,"Os12g0274700","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"","RBCS",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",-1.4902468]
[null,"Os12g0291400","RuBisCO small subunit 5, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 5","RBCS5",null,"Os12g0274700","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"","RBCS",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",-1.1648526]
[null,"Os12g0292400","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4","RBCS4",null,"Os12g0274700","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"","RBCS",null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",-1.3719234]
[null,"Os12g0292400","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4","RBCS4",null,"Os12g0291400","RuBisCO small subunit 5, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 5","RBCS5",null,"Os04g0402100","Calnexin","CNX",-2.143055]
[null,"Os12g0292400","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4","RBCS4",null,"Os12g0291100","RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3","RBCS3",null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",2.7435856]
[null,"Os12g0291400","RuBisCO small subunit 5, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 5","RBCS5",null,"Os12g0291100","RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3","RBCS3",null,"Os04g0457000","light-harvesting protein CP24, PSII CP24, light-harvesting complex subunit b6","Os04g0457000",5.3929396]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",3.2777576]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os04g0462900","Similar to prohibitin2.","Os04g0462900",-1.0981636]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",-1.5155706]
[null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os04g0488100","Rad21-2 protein","RAD21-2",-2.09376]
[null,"Os03g0828100","Similar to 50S ribosomal protein L18, chloroplastic.","Os03g0828100",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os04g0490500","Receptor-like Cytoplasmic Kinase 152","RLCK152",-2.0370302]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",-1.2307291]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",-1.2744498]
[null,"Os07g0411200","RING finger protein OsRFPH2-13, RING-H2 protein 13","OsRFPH2-13",null,"Os03g0123300","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1","TAD1",null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",1.9514809]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os04g0563700","Cyclin-B2-1, G2/mitotic-specific cyclin-B2-1, B-type cyclin 2;1, cyclin Oryza sativa1","CYCB2;1",2.797039]
[null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",null,"Os02g0192700","peroxiredoxin IIE2, Type-II Prx E2, Type-II peroxiredoxin E2","PRXIIE2",null,"Os04g0564700","WD40 repeat domain containing protein.","Os04g0564700",2.3779507]
[null,"Os03g0131900","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3","YGL9",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os04g0567800","Similar to OSIGBa0103M18.3 protein.","Os04g0567800",-1.3252711]
[null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",null,"Os01g0266600","Type-II Prx F, Type-II peroxiredoxin F","PRXIIF",null,"Os04g0577000","Similar to H0404F02.2 protein.","Os04g0577000",-2.481876]
[null,"Os03g0131900","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3","YGL9",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os04g0580400","Ubiquitin-conjugating enzyme 3, E2 SUMO conjugation enzyme 1c, SUMO conjugation enzyme 1c, E2 protein SCE1c","UBC3",3.453637]
[null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",null,"Os02g0192700","peroxiredoxin IIE2, Type-II Prx E2, Type-II peroxiredoxin E2","PRXIIE2",null,"Os04g0583600","Similar to Histone H4.","Os04g0583600",2.9088006]
[null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",null,"Os01g0266600","Type-II Prx F, Type-II peroxiredoxin F","PRXIIF",null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600",-1.713912]
[null,"Os06g0196300","peroxiredoxin Q","PRXQ",null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",null,"Os04g0625000","Conserved hypothetical protein.","Os04g0625000",3.0811903]
[null,"Os06g0196300","peroxiredoxin Q","PRXQ",null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",-1.2810302]
[null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",null,"Os02g0115700","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A","CATA",null,"Os04g0650800","3-phosphoglycerate dehydrogenase 1","PGDH1",-2.516265]
[null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",null,"Os02g0115700","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A","CATA",null,"Os04g0665800","Similar to H1005F08.12 protein.","Os04g0665800",-1.6294403]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os04g0684800","Ubc-E2 variant 1D","OsUEV1D",-2.1456556]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",-1.3429432]
[null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os03g0845300","Hypothetical conserved gene.","Os03g0845300",null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",3.797882]
[null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",2.554891]
[null,"Os12g0289600","Conserved hypothetical protein.","Os12g0289600",null,"Os02g0704966","Hypothetical conserved gene.","Os02g0704966",null,"Os05g0111100","Zinc finger, Tim10/DDP-type family protein.","Os05g0111100",-1.3962111]
[null,"Os08g0120200","ATPase, AAA+ type, core domain containing protein.","Os08g0120200",null,"Os02g0704966","Hypothetical conserved gene.","Os02g0704966",null,"Os05g0111200","Similar to Amino acid selective channel protein.","Os05g0111200",3.0932646]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os05g0148300","Ribosomal protein S27/S33","Os05g0148300",-1.1880016]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os05g0156500","ERdj3B-like gene, ERDJ3 like, ERDJ3 like gene, DnaJ domain protein B6, ER-resident J-protein 3B","OsDjB6",-1.5930023]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",3.3712654]
[null,"Os07g0562700","Type III chlorophyll a/b-binding protein, PSII Cab type III","Os07g0562700",null,"Os01g0720500","Type I chlorophyll a/b-binding protein, light-harvesting chlorophyll a/b-binding protein b1.1","Os01g0720500",null,"Os05g0227600","REPETITIVE PROLINE-RICH PROTEIN 1.2","Os05g0227600",3.8990345]
[null,"Os07g0562700","Type III chlorophyll a/b-binding protein, PSII Cab type III","Os07g0562700",null,"Os01g0600900","\\Chlorophyll a-b binding protein 2, chloroplastic\\\", LHCII type I CAB-2, light harvesting chlorophyll a/b binding protein 2\"","CAB2R",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",-1.4026823]
[null,"Os12g0534200","Similar to Acyl carrier protein I, chloroplast precursor (ACP I).","Os12g0534200",null,"Os08g0239000","Complex 1 LYR protein family protein.","Os08g0239000",null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 ",-1.6641512]
[null,"Os11g0521500","Similar to Acyl carrier protein, chloroplast precursor (ACP)","Os11g0521500",null,"Os08g0239000","Complex 1 LYR protein family protein.","Os08g0239000",null,"Os05g0313700","Conserved hypothetical protein.","Os05g0313700",4.4552364]
[null,"Os03g0162200","Similar to Histone H2A.","Os03g0162200",null,"Os01g0835900","Histone H4","Os01g0835900",null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",4.515171]
[null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os05g0378900","Similar to Golgi transport complex protein-related.","Os05g0378900",-1.8755779]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os05g0382600","Annexin 3","ANN3",3.4073086]
[null,"Os08g0254500","Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY).","Os08g0254500",null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os05g0401100","Protein of unknown function DUF477 family protein.","Os05g0401100",4.0792966]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os05g0454200","bright green leaf, guanine nucleotide exchange factor for Rop 10, GEF for ROP 10, Rop-specific GEF10, Rop-specific guanine nucleotide exchange factor 10","BGL",4.0146008]
[null,"Os10g0573000","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1","REY(K2)",null,"Os04g0580400","Ubiquitin-conjugating enzyme 3, E2 SUMO conjugation enzyme 1c, SUMO conjugation enzyme 1c, E2 protein SCE1c","UBC3",null,"Os05g0455500","delta1-pyrroline-5-carboxylate synthetase, Delta-1-pyrroline-5-carboxylate synthetase, pyrroline-5-carboxylate synthetase, proline carboxylate synthase 1, Aldehyde dehydrogenase 18B1","P5CS",1.0471735]
[null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1",-2.4365573]
[null,"Os06g0729000","phytoene synthase 1, PSY1-like gene","PSY1",null,"Os01g0134500","Sterol methyltransferase 1, Dwarf 7","OsSTE1",null,"Os05g0460600","Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).","Os05g0460600",2.4438138]
[null,"Os04g0564700","WD40 repeat domain containing protein.","Os04g0564700",null,"Os03g0736500","Syntaxin-related protein KNOLLE, OsKNOLLE, KNOLLE, Syntaxin of Plants 111","Os03g0736500",null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",-1.1920543]
[null,"Os03g0279200","Similar to Histone H2A.","Os03g0279200",null,"Os03g0162200","Similar to Histone H2A.","Os03g0162200",null,"Os05g0463800","rice HAP3C, Nuclear transcription factor Y subunit B-4, Transcriptional activator HAP3C, NUCLEAR FACTOR-Y subunit B3, NUCLEAR FACTOR-Y subunit NF-YB3, NF-YB subunit 3, NF-YB family 3","HAP3C",-1.5883536]
[null,"Os03g0162200","Similar to Histone H2A.","Os03g0162200",null,"Os01g0502700","Similar to Histone H2A.","Os01g0502700",null,"Os05g0475300","VHS domain containing protein.","Os05g0475300",-1.2825184]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0476700","arm repeat protein, plant U-box-containing protein 2, U-box protein 2","PUB2",-2.0830069]
[null,"Os08g0490900","Similar to Histone H2B.2.","Os08g0490900",null,"Os03g0162200","Similar to Histone H2A.","Os03g0162200",null,"Os05g0480000","STN8 kinase","STN8",2.5298247]
[null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",null,"Os03g0131900","Chloroplast Signal Recognition Particle 43, chloroplast signal recognition particle 43 KD protein, chloroplast signal recognition particle 43 kDa protein, yellow green leaf 9, pale- green leaf 3","YGL9",null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",-1.2743721]
[null,"Os04g0580400","Ubiquitin-conjugating enzyme 3, E2 SUMO conjugation enzyme 1c, SUMO conjugation enzyme 1c, E2 protein SCE1c","UBC3",null,"Os01g0111100","cyclophilin 26-2, cyclophilin 1","CYP26-2",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",-1.6236553]
[null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",null,"Os04g0408700","Similar to DNA-binding protein S1FA1.","Os04g0408700",null,"Os05g0491200","b-subunit of SnRK1, beta-subunit of SnRK1","Os05g0491200",0.73962307]
[null,"Os03g0123300","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1","TAD1",null,"Os01g0805600","B-type cyclin 1;1","CYCB1;1",null,"Os05g0495700","glycerol-3-phosphate dehydrogenase 1","OsGPDH1-1",-2.2130299]
[null,"Os05g0519600","Similar to 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme.","Os05g0519600",null,"Os02g0192700","peroxiredoxin IIE2, Type-II Prx E2, Type-II peroxiredoxin E2","PRXIIE2",null,"Os05g0496200","Similar to 3-phosphoglycerate kinase (Fragment).","Os05g0496200",4.289151]
[null,"Os05g0519600","Similar to 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme.","Os05g0519600",null,"Os01g0266600","Type-II Prx F, Type-II peroxiredoxin F","PRXIIF",null,"Os05g0498300","MutS-homolog 5","MSH5",3.3330908]
[null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os02g0595700","chloroplast elongation factor EF-Tu, elongation factor Tu","EFTU",null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",4.616559]
[null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",-1.4404402]
[null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os05g0519600","Similar to 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme.","Os05g0519600",2.991835]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",-1.4546218]
[null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os05g0533600","SOLUBLE STARCH SYNTHASE IV-2","SSIVB",0.8600292]
[null,"Os11g0521500","Similar to Acyl carrier protein, chloroplast precursor (ACP)","Os11g0521500",null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os05g0539700","nucleosome assembly protein 1-like protein 2, Nucleosome assembly protein 1;2, NAP1-like protein 2","Os05g0539700",-1.5154638]
[null,"Os01g0956600","Nucleotide-binding, alpha-beta plait domain containing protein.","Os01g0956600",null,"Os01g0851700","Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2","PHO2",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",-1.6665268]
[null,"Os12g0534200","Similar to Acyl carrier protein I, chloroplast precursor (ACP I).","Os12g0534200",null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os05g0556400","DOMON related domain containing protein.","Os05g0556400",6.9186025]
[null,"Os02g0113200","Cytochrome P450 51H5","CYP51H5",null,"Os01g0134500","Sterol methyltransferase 1, Dwarf 7","OsSTE1",null,"Os05g0568900","Deg protease 9, DEG PROTEASE 9","OsDegp9",2.3060613]
[null,"Os08g0254500","Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY).","Os08g0254500",null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os05g0579800","Similar to Anaphase promoting complex subunit 10 (APC10)","Os05g0579800",-1.1636715]
[null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os05g0587300","Molecular chaperone, heat shock protein","Os05g0587300",2.7718458]
[null,"Os04g0691600","Similar to 30S ribosomal protein S17.","Os04g0691600",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os06g0107700","Leaf-type ferredoxin-NADP+-oxidoreductase","OsLFNR2",2.467123]
[null,"Os03g0123300","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1","TAD1",null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","OsCDKA;1",null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",-1.5947952]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",null,"Os06g0133000","glutinous endosperm, waxy, Waxy, WAXY, \\Granule-bound starch synthase 1, chloroplastic/amyloplastic\\\", Granule-bound starch synthase I, UDP-glycogen synthase, \\\"Granule-bound starch synthase, chloroplast precursor\\\", glycogen [starch] synthase, Granule-bound glycogen synthase, UDPG-glycogen transglucosylase, uridine diphosphoglucose-glycogen glucosyltransferase, glycogen [starch] synthetase, Granule-bound glycogen [starch] synthase, UDPG-glycogen synthetase, granule bound starch synthase I, granule-bound starch synthase 1, granule-bound starch synthase I\"","WX1",-2.5110621]
[null,"Os08g0512600","B-type cyclin-dependent kinase 2;1","CDKB2;1 ",null,"Os03g0123300","Tillering and Dwarf 1, cell cycle switch 52 A, cell cycle switch 52A, A-type cell cycle switch 52, tiller enhancer, HOMOLOGUE OF CDH1, CELL CYCLE SWITCH PROTEIN 52A 1","TAD1",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",-1.4614]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os03g0845300","Hypothetical conserved gene.","Os03g0845300",null,"Os06g0140700","rice homeobox gene 2, Homeobox-leucine zipper protein HOX2, Homeodomain transcription factor HOX2, HD-ZIP protein HOX2","HOX2",1.6275163]
[null,"Os02g0192700","peroxiredoxin IIE2, Type-II Prx E2, Type-II peroxiredoxin E2","PRXIIE2",null,"Os02g0115700","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A","CATA",null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",-1.1698723]
[null,"Os02g0115700","CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A","CATA",null,"Os01g0266600","Type-II Prx F, Type-II peroxiredoxin F","PRXIIF",null,"Os06g0168500","Syntaxin of Plants131","SYP131",-2.2820158]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os01g0555800","peptide deformylase 1A","PDF1A",null,"Os06g0168600","virescent3, virescent 3, virescent-3, ribonucleotide reductase large subunit 1, RIBONUCLEOTIDE REDUCTASE 1","V3",-0.9545393]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os02g0537700","rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1, 2-Cys peroxiredoxin A, Peroxiredoxin 2","OsTPX",null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",-1.6885979]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os04g0416400","peroxiredoxin, 2-Cys peroxiredoxin B","2CYSPRXB",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",-1.0907259]
[null,"Os05g0111200","Similar to Amino acid selective channel protein.","Os05g0111200",null,"Os04g0678700","NADPH: protochlorophyllide oxidoreductase A, Protochlorophyllide oxidoreductase A","PORA",null,"Os06g0196300","peroxiredoxin Q","PRXQ",3.5174828]
[null,"Os08g0512600","B-type cyclin-dependent kinase 2;1","CDKB2;1 ",null,"Os01g0805600","B-type cyclin 1;1","CYCB1;1",null,"Os06g0198800","Similar to 25.3 kDa vesicle transport protein.","Os06g0198800",-1.2244334]
[null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","CDC2-1",null,"Os01g0805600","B-type cyclin 1;1","CYCB1;1",null,"Os06g0289900","C-pentosyl flavone pentosyltransferase, anthocyanidin 3-O-glucosyltransferase","UGT",9.773715]
[null,"Os08g0512600","B-type cyclin-dependent kinase 2;1","CDKB2;1 ",null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","OsCDKA;1",null,"Os06g0308000","trigger factor-like protein","OsTIG",3.099945]
[null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os04g0408700","Similar to DNA-binding protein S1FA1.","Os04g0408700",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",2.6923733]
[null,"Os05g0556400","DOMON related domain containing protein.","Os05g0556400",null,"Os05g0507000","Similar to JHL23J11.5 protein.","Os05g0507000",null,"Os06g0343100","Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8).","Os06g0343100",-1.1965532]
[null,"Os02g0668500","Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.","Os02g0668500",null,"Os01g0835900","Histone H4","Os01g0835900",null,"Os06g0472400","Similar to Transcriptional regulator.","Os06g0472400",0.89328337]
[null,"Os03g0720300","GLU DECARBOXYLASE ISOZYME1, GLU DECARBOXYLASE ISOZYME 1, glutamate decarboxylase 1","Os03g0720300",null,"Os02g0750100","F-type ATPase delta, ATP synthase subunit delta","Os02g0750100",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",-1.3471541]
[null,"Os07g0434500","DRD1 protein","DRD1",null,"Os01g0578000","DNA repair protein, DNA double-strand break repair, synaptonemal complex assembly","Os01g0578000",null,"Os06g0502900","Similar to DGCR14 protein.","Os06g0502900",-1.4583092]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os08g0254500","Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY).","Os08g0254500",null,"Os06g0551400","small GTP-binding protein OsRab11D1","OsRab11D1",-1.658]
[null,"Os08g0254500","Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY).","Os08g0254500",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os06g0594100","crotonase","CRO",1.4174113]
[null,"Os08g0512600","B-type cyclin-dependent kinase 2;1","CDKB2;1 ",null,"Os02g0617600","Protein phosphatase 2A, regulatory subunit PR55 domain containing protein.","Os02g0617600",null,"Os06g0623300","NAD(P)-binding domain containing protein.","Os06g0623300",1.35532]
[null,"Os12g0534200","Similar to Acyl carrier protein I, chloroplast precursor (ACP I).","Os12g0534200",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os06g0647100","Similar to 50S ribosomal protein L35","Os06g0647100",3.5426283]
[null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",-1.1116076]
[null,"Os11g0521500","Similar to Acyl carrier protein, chloroplast precursor (ACP)","Os11g0521500",null,"Os02g0652600","Ribosomal protein L19 family protein.","Os02g0652600",null,"Os06g0662200","b-ZIP transcription factor 52, rice seed b-Zipper 5","RISBZ5",1.5548611]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os02g0312600","small GTP-binding protein 7, Rac-like GTP-binding protein 7, GTPase protein ROP5","RAC7",null,"Os06g0667100","Nuclear factor Y C4 subunit, Nuclear factor Y C subunit 4, NUCLEAR FACTOR-Y subunit C4, NUCLEAR FACTOR-Y subunit NF-YC4, NF-YC subunit 4, NF-YC family 4","HAP5B",-1.3833675]
[null,"Os03g0118400","Cell division control protein 2 homolog 1, Cyclin-dependent kinase A-1","CDC2-1",null,"Os02g0617600","Protein phosphatase 2A, regulatory subunit PR55 domain containing protein.","Os02g0617600",null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",2.874467]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os01g0540300","Rac-like GTP-binding protein 2.","Os01g0540300",null,"Os06g0687700","Similar to T-complex protein 1, eta subunit (TCP-1-eta)","Os06g0687700",-1.5429611]
[null,"Os03g0279200","Similar to Histone H2A.","Os03g0279200",null,"Os01g0835900","Histone H4","Os01g0835900",null,"Os06g0698600","exocyst subunit EXO70 family protein G2","EXO70G2",-1.6197495]
[null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",null,"Os04g0408700","Similar to DNA-binding protein S1FA1.","Os04g0408700",null,"Os06g0704700","NAD(P)-binding domain containing protein.","Os06g0704700",2.4749198]
[null,"Os07g0580900","geranylgeranyl diphosphate synthase 1, GGPP synthase 1, geranylgeranyl-PP synthase 1","GGPPS1",null,"Os02g0744900","Geranylgeranyl reductase, Light-Induced Yellow Leaf 1, Geranylgeranyl Reductase I, Geranylgeranyl-diphosphate reductase, geranylgeranyl reductase 1","OsChl P",null,"Os06g0712700","SUPERWOMAN1/OsMADS16, SUPERWOMAN1, superwoman-1, MADS-box transcription factor 16, Protein SUPERWOMAN1, Protein APETALA3-like","SPW1",1.5986204]
[null,"Os02g0668500","Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.","Os02g0668500",null,"Os01g0502700","Similar to Histone H2A.","Os01g0502700",null,"Os06g0716700","rice 90kDa heat shock protein, heat shock protein90, heat shock protein 90, glucose-regulated protein 94, endoplasmin","HSP90",-1.6874409]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os05g0513800","Rac-like GTP-binding protein 2, Rac/Rop-type GTPase 2","RAC2",null,"Os06g0726800","Cyclin-B2-2, G2/mitotic-specific cyclin-B2-2, B-type cyclin 2;2, cyclin Oryza sativa2","CYCB2;2",2.1437845]
[null,"Os03g0279200","Similar to Histone H2A.","Os03g0279200",null,"Os02g0668500","Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein.","Os02g0668500",null,"Os06g0729000","phytoene synthase 1, PSY1-like gene","PSY1",3.1069627]
[null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",null,"Os01g0229400","small GTP-binding protein 1, Rac-like GTP-binding protein 1, GTPase Rac homolog, Rice homolog of mammalian Rac-GTPase RAC1","RAC1",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",3.345026]
[null,"Os01g0835900","Histone H4","Os01g0835900",null,"Os01g0502700","Similar to Histone H2A.","Os01g0502700",null,"Os07g0164200","Similar to cDNA clone:001-026-G04, full insert sequence.","Os07g0164200",2.4886541]
[null,"Os03g0845300","Hypothetical conserved gene.","Os03g0845300",null,"Os03g0356300","Ribosomal protein L6 family protein.","Os03g0356300",null,"Os07g0176600","NIMA-related kinase 3","OsSTA192",6.0319395]
[null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",null,"Os05g0375600","Similar to Peptide chain release factor 2.","Os05g0375600",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",-1.215066]
[null,"Os12g0271700","solanesyl diphosphate synthase 3, solanesyl-PP synthase 3, SPP synthase 3","SPS3",null,"Os04g0422000","fibrillin5, fibrillin 5","FBN5",null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",-1.7680101]
[null,"Os06g0107700","Leaf-type ferredoxin-NADP+-oxidoreductase","OsLFNR2",null,"Os02g0257300","Sulfurtransferase 12","STR12",null,"Os07g0212200","Similar to MRNA-binding protein (Fragment).","Os07g0212200",3.644496]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os07g0239400","small GTP-binding protein OsRab8A3","OsRab8A3",-1.428124]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os07g0246200","calreticulin 1, calreticulin","Os07g0246200",-1.5401869]
[null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os07g0262200","narrow leaf 8","NAL8",-1.2534456]
[null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os07g0291100","ransport protein particle (TRAPP) component domain containing protein.","Os07g0291100",-1.3489962]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",-2.3479977]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os07g0411200","RING finger protein OsRFPH2-13, RING-H2 protein 13","OsRFPH2-13",1.3109775]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os07g0434500","DRD1 protein","DRD1",1.3719077]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os07g0468100","Similar to Glutathione S-transferase GST 19","GSTU46",2.8911023]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os07g0479100","RING finger protein OsRFPH2-17, RING-H2 protein 17","OsRFPH2-17",1.1885519]
[null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os07g0513000","ATP synthase g-chain, ATP synthase gamma chain, F-type ATPase gamma","Os07g0513000",3.6252513]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os07g0544800","PSII subunit PsbQ, photosystem II subunit PsbQ","PSBQ",2.9385176]
[null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","RPL27",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os07g0548300","Hypothetical conserved gene.","Os07g0548300",2.8534632]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os07g0556200","Rieske Fe-S precursor protein","PETC",2.4468603]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os07g0558400","light-harvesting protein CP29, PSII inner antenna subunit CP29, PSII antenna CP29, Photosystem II Inner Antenna CP29, light-harvesting complex subunit b4","Os07g0558400",4.7991667]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os07g0558500","thylakoid formation1","NYC4",2.191905]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os07g0562700","Type III chlorophyll a/b-binding protein, PSII Cab type III","Os07g0562700",4.920637]
[null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",2.4942656]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os07g0573600","Component of the core general transcription and DNA repair factor IIH","Os07g0573600",-1.4142756]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",4.3961744]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os07g0580900","geranylgeranyl diphosphate synthase 1, GGPP synthase 1, geranylgeranyl-PP synthase 1","GGPPS1",1.5954475]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os07g0630800","Similar to Nodule-enhanced malate dehydrogenase.","Os07g0630800",1.9137554]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os07g0633200","SC35-like protein 25, SCL subfamily protein 25","SCL25",-1.9722376]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os07g0641700","Similar to 10 kDa chaperonin","Os07g0641700",-2.2867737]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os07g0647900","RNA helicase 57","Os07g0647900",-1.2956057]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os07g0656500","Magnesium-chelatase subunit H","chlH",3.2795124]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os07g0657200","WD40/YVTN repeat-like domain containing protein.","Os07g0657200",-1.3502874]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os07g0657900","NADPH thioredoxin reductase, GRX-like protein 15, glutaredoxin-like protein 15, chloroplastic type NTR, chloroplastic type NADPH-dependent thioredoxin reductase","NTRC",2.2251358]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os07g0673550","Photosystem II protein PsbX family protein.","Os07g0673550",4.2182546]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",-1.4774237]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",-1.0653439]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os07g0678600","CBL-interacting protein kinase 2, Sucrose nonfermenting-1-related protein kinase 3.26","CIPK02",-1.1074228]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",-1.2709293]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os06g0683200","Similar to 50S ribosomal protein L24","Os06g0683200",null,"Os08g0104600","Ferredoxin I, ferredoxin, ferredoxin 1, anti-disease protein 1","Fd1",4.0257435]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os08g0108200","G-protein, beta subunit family protein.","Os08g0108200",-2.4617834]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",-1.0989628]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os08g0117000","pollen semi-sterility 1, pollen semi-sterile 1, Pollen semi-sterility1, Pollen semisterility1, Pollen semisterility 1","PSS1",4.140045]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os08g0120200","ATPase, AAA+ type, core domain containing protein.","Os08g0120200",1.1593909]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os08g0126300","glyceraldehydes-3-phosphate dehydrogenase, cytosolic GAPDH3, cytosolic glyceraldehyde-3-phosphate dehydrogenase 3","GAPC",-1.491663]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os08g0174500","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"","HD5",-1.5883536]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os08g0176900","b-ZIP transcription factor 64","BZIP64",-1.5614362]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os08g0250700","Thioredoxin domain 2 containing protein.","Os08g0250700",-1.3874793]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os08g0254500","Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY).","Os08g0254500",3.245181]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os08g0345800","ADP-glucose pyrophosphorylase small subunit 2a","OsAGPS2a",2.628613]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os08g0359500","CS domain domain containing protein.","Os08g0359500",-1.4779396]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os08g0374100","Ubiquitin-conjugating enzyme 5","UBC5",-1.3828611]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os08g0422300","Conserved hypothetical protein.","Os08g0422300",-1.4416056]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os08g0427700","Histone H2A.","Os08g0427700",3.1531954]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os08g0428400","Jasmonate ZIM-domain protein 9, Jasmonate ZIM-domain protein 3, Jasmonate Zim-Domain3","TIFY6A",1.6314845]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",4.3850317]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os08g0490900","Similar to Histone H2B.2.","Os08g0490900",2.3787546]
[null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os08g0504700","Gibberellin-induced A20/AN1 zinc-finger protein","Os08g0504700",-1.5825052]
[null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os08g0512600","B-type cyclin-dependent kinase 2;1","CDKB2;1 ",5.1663203]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os08g0521400","Similar to Zn-finger, RanBP-type, containing protein.","Os08g0521400",-1.2269647]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",-2.702067]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os08g0532500","Hypothetical conserved gene","Os08g0532500",-1.5280879]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os08g0533600","ACT-domain repeat protein 8","ACR8",1.3630586]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",-1.2364025]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os08g0553800","NAD(P)-binding domain containing protein","Os08g0553800",3.3282118]
[null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os08g0558200","glutaredoxin 20","GRX20",1.1565208]
[null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os08g0561700","superoxide dismutase 4, Cu-dependent SOD 2","SOD4",4.0148964]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",3.8830214]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",-1.2900357]
[null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3",null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23",-1.3573203]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os09g0407900","ubiquitin-specific processing protease 9-2, Ubiquitin-specific protease 34","UBP9-2",-1.3258328]
[null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os09g0411650","SET protein 36","Os09g0411650",1.9358482]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",-2.3273535]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os09g0422500","Cellulose synthase A catalytic subunit 9","Os09g0422500",2.1067362]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os09g0433600","Similar to Histone H4.","Os09g0433600",1.2780957]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os09g0439600","Exo70 exocyst complex subunit family protein.","Os09g0439600",-1.4771633]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os09g0454600","phosphate transporter 19","PT19",-2.6475968]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os09g0466100","Cyclin-D2-1, cyclinD2;1, Cyclin-D4-1, cyclinD4;1","CYCD4;1",1.1386518]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",2.22721]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",-1.4401388]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",-1.5706644]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",-1.5706644]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os09g0515100","Similar to bromodomain protein 103.","Os09g0515100",-2.1464853]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os09g0542000","Similar to Ribonuclease P.","Os09g0542000",-1.7172313]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os10g0183900","Ribosomal RNA adenine methylase transferase family protein.","Os10g0183900",-1.1481218]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",2.1115074]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os10g0377400","small GTP-binding protein OsRab11E1","OsRab11E1",-2.3121347]
[null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","RPL27",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os10g0388600","Hypothetical conserved gene.","Os10g0388600",1.8950663]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os10g0389800","leucine-rich repeat kinase","Os10g0389800",3.7804275]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os10g0462900","58K antigen, HypB protein","Os10g0462900",-2.5426521]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os10g0488100","Similar to prefoldin subunit 5.","Os10g0488100",-1.5449886]
[null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os10g0492300","Similar to IAP100.","Os10g0492300",2.3666716]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os10g0504600","myosin, SKIP interacting protein 24, SKIPa-interacting protein 24, SKIPa-interacting protein 24","Os10g0504600",4.857711]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os10g0555700","Expansin-B2, Beta-expansin-2","EXPB2",3.3826852]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os10g0564500","stress/ABA-activated protein kinase 3, rice endosperm protein kinase, Stress-Activated Protein Kinase 3, Sucrose nonfermenting-1-related protein kinase 2.3","SAPK3",1.8008947]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os10g0573000","revertible early yellowing Kitaake 2, Phosphofructokinase B-type 1","REY(K2)",3.4270086]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",-3.2426958]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os11g0113700","CBL-interacting protein kinase 15, Sucrose nonfermenting-1-related protein kinase 3.31","CIPK15",2.8731732]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os11g0148600","Conserved hypothetical protein.","Os11g0148600",-1.4235897]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",-1.9686723]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os11g0210300","Alcohol dehydrogenase1, Alcohol dehydrogenase 1, Alcohol dehydrogenase-1, reduced adh activity, Alcohol dehydrogenase I","ADH1",-1.5293689]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",-1.2423344]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os11g0242800","light-harvesting protein ASCAB9-A, PSII CP26, PSII Lhcb5, light-harvesting complex II protein LHCB5","LHCB5",3.9883347]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os11g0269100","Similar to 50S ribosomal protein L16, chloroplastic.","Os11g0269100",2.1679058]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os11g0433500","SEC23 protein","Os11g0433500",-1.5110369]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os11g0463600","Similar to FHA domain containing protein, expressed.","Os11g0463600",-1.2350578]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os11g0497000","SUMO-activating enzyme 1, E1 SUMO-activating enzyme 1","SAE1",-1.2709727]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os11g0521500","Similar to Acyl carrier protein, chloroplast precursor (ACP)","Os11g0521500",2.686111]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os11g0544800","glutamyl-tRNA(Gln) amidotransferase B subunit family protein, glutamyl-tRNA(Gln) amidotransferase B subunit","GATB",3.0551763]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",-1.3981991]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",2.7451134]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os11g0568500","Prefoldin domain containing protein.","Os11g0568500",-1.3348994]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os11g0604700","Thioredoxin domain 2 containing protein.","Os11g0604700",-1.7185373]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os11g0660500","21 kDa polypeptide, translationally controlled tumor protein, TCTP homolog, Tumor protein homolog","Os11g0660500",-1.3130846]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900",-1.912673]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os11g0707100","Hypothetical conserved gene.","Os11g0707100",2.7571783]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",3.7600007]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os12g0134300","Conserved hypothetical protein.","Os12g0134300",-1.8716922]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os12g0156400","Dcp1-like decapping family protein.","Os12g0156400",-1.6583319]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os12g0169100","Protein of unknown function DUF869, ","Os12g0169100",2.712398]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os12g0175500","glutaredoxin 27","GRX27",2.16671]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",2.4612417]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os12g0244200","Ribosomal protein L37","Os12g0244200",-1.6190023]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os12g0274700","Small subunits of Rubisco, \\Ribulose bisphosphate carboxylase small chain, chloroplastic\\\", RuBisCO small subunit, Ribulose bisphosphate carboxylase small chain C, RuBisCO small subunit C, RuBisCO small subunit 2, ribulose-1, 5-bisphosphate carboxylase/oxygenase small subunit, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 2, small subunit of ribulose-1, 5-bisphosphate carboxylase\"","RBCS2",4.593788]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os12g0277500","chaperonin 60 alpha subunit 1","OsCPn60a1",3.166525]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os12g0289600","Conserved hypothetical protein.","Os12g0289600",2.2631183]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os12g0291100","RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3","RBCS3",3.898468]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os12g0291400","RuBisCO small subunit 5, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 5","RBCS5",7.361939]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os12g0292400","nuclear encoded small subunit of ribulose-1, 5-bisphosphate carboxylase/oxygenase, RuBisCO small subunit 4, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 4","RBCS4",6.1049204]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os12g0297500","Pyruvate phosphate dikinase","Os12g0297500",-1.5695596]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",3.0340977]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os12g0488300","Similar to ribosomal protein L22.","Os12g0488300",2.6408892]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",-1.7830772]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os06g0683200","Similar to 50S ribosomal protein L24","Os06g0683200",null,"Os12g0530000","Histone H2A IV","Os12g0530000",0.641932]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os12g0534200","Similar to Acyl carrier protein I, chloroplast precursor (ACP I).","Os12g0534200",2.2093925]
[null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","RPL13",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os12g0541500","Similar to Elongation factor Ts.","Os12g0541500",4.5339084]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",-1.0760603]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",1.7047405]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os12g0605100","Conserved hypothetical protein.","Os12g0605100",2.408094]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os12g0605800","3-methylcrotonyl CoA carboxylase biotin-containing subunit","OsL55",1.1273022]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os12g0613500","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132","Os12g0613500",-1.5581665]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os12g0271700","solanesyl diphosphate synthase 3, solanesyl-PP synthase 3, SPP synthase 3","SPS3",2.817161]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800",-1.464098]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0111100","cyclophilin 26-2, cyclophilin 1","CYP26-2",4.748054]
[null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800",-1.47334]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os01g0134500","Sterol methyltransferase 1, Dwarf 7","OsSTE1",2.912797]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26",-1.320137]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400",null,"Os01g0151200","Similar to Inner membrane protein ALBINO3","Os01g0151200",1.7293353]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0184000","NUC156 family protein.","Os01g0184000",-1.2206736]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400",null,"Os01g0184800","Thioredoxin fold domain containing protein.","Os01g0184800",-1.598361]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0191800","Aurora-B","Os01g0191800",4.1312923]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os01g0193900","ALWAYS EARLYLIKE1","ALYL1",-2.2218194]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os01g0229400","small GTP-binding protein 1, Rac-like GTP-binding protein 1, GTPase Rac homolog, Rice homolog of mammalian Rac-GTPase RAC1","RAC1",2.5163298]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os01g0254100","TOPLESS-RELATED PROTEIN 1","Os01g0254100",-1.307517]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0266600","Type-II Prx F, Type-II peroxiredoxin F","PRXIIF",2.2603788]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",2.682374]
[null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os01g0355500","DnaJ domain protein C5","Os01g0355500",-1.3579264]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os01g0502700","Similar to Histone H2A.","Os01g0502700",2.1166868]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0528000","transcription factor class C1","TFC1",-1.2274132]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os01g0540300","Rac-like GTP-binding protein 2.","Os01g0540300",1.9898052]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400",null,"Os01g0555800","peptide deformylase 1A","PDF1A",3.3308554]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0578000","DNA repair protein, DNA double-strand break repair, synaptonemal complex assembly","Os01g0578000",1.0880694]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0621300","Hypothetical conserved gene","Os01g0621300",0.62627697]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0708600","TRAPP I complex, Trs31 domain containing protein.","Os01g0708600",-1.4113517]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0776400","Similar to predicted protein.","Os01g0776400",-1.2974167]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0805600","B-type cyclin 1;1","CYCB1;1",3.5874407]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700",-1.6433201]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0848200","pyrroline-5-carboxylate synthetase 2, proline carboxylate synthase 2, Aldehyde dehydrogenase 18B2","OsP5CS2",3.0018625]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0851700","Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2","PHO2",2.153758]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os01g0900900","Ovarian tumour, otubain domain containing protein.","Os01g0900900",-1.1982269]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os01g0918200","Small ubiquitin like modifier, SUMO family protein","Os01g0918200",0.74733925]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os01g0962400","Ubiquitin-like, Ufm1 domain containing protein.","Os01g0962400",-1.4493914]
[null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os02g0102900","chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain","OsCPn60b2",-1.326961]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os02g0115900","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2","OsBiP1",-1.7320147]
[null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os02g0126800","Similar to Golgi SNARE 12 protein (AtGOS12)","Os02g0126800",-1.3334794]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os02g0135300","protein kinase Wee1","WEE1",-1.5648608]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os02g0174000","Myb-like DNA-binding domain","Os02g0174000",0.96797514]
[null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","RPL13",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os02g0257300","Sulfurtransferase 12","STR12",5.0602894]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0312600","small GTP-binding protein 7, Rac-like GTP-binding protein 7, GTPase protein ROP5","RAC7",3.0578794]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os02g0456000","COG4 transport domain containing protein.","Os02g0456000",-1.6230779]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os02g0504500","PUG domain containing protein.","Os02g0504500",-1.2739391]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os02g0523500","cytoskeleton-associated 120 kDa RNA-binding protein, OsTudor-SN, Tudor-SN","OsTSN",-1.1430359]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0581100","Similar to photosystem II 5 kD protein.","Os02g0581100",3.1112738]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os02g0617600","Protein phosphatase 2A, regulatory subunit PR55 domain containing protein.","Os02g0617600",2.2144775]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0654400","Transcription initiation factor TFIID component TAF4 domain containing protein.","Os02g0654400",-1.5072489]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os02g0663800","actin depolymerizing factor 1","ADF1",-2.3254566]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os02g0704966","Hypothetical conserved gene.","Os02g0704966",2.1486707]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0708400","Tetratricopeptide-like helical domain containing protein.","Os02g0708400",1.5476265]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os02g0717700","Acyl-CoA N-acyltransferase domain containing protein.","Os02g0717700",-1.7037072]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0722800","WD40 repeat-like domain containing protein.","Os02g0722800",-1.3273425]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os02g0749500","Similar to SEC6.","Os02g0749500",-1.6656156]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os02g0750100","F-type ATPase delta, ATP synthase subunit delta","Os02g0750100",3.3481398]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os02g0782100","Uncharacterised domain NUC173 domain containing protein.","Os02g0782100",-1.4469962]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400",2.1850743]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os02g0806600","ENTH/VHS domain containing protein.","Os02g0806600",-1.7256422]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os03g0114900","Similar to putaive mitochondrial inner membrane protein","Os03g0114900",-1.1468611]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os03g0143400","heat-shock protein 60","Os03g0143400",-2.1775208]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os03g0238300","Endonuclease/exonuclease/phosphatase domain containing protein.","Os03g0238300",-1.59407]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os03g0341000","ethylene response factor 66, APETALA2/ethylene-responsive element binding protein 30","ERF66",-1.7000475]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os03g0628900","Prefoldin domain containing protein.","Os03g0628900",-1.2275143]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os03g0637800","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog","MIS2",4.531393]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os03g0721400","Protein of unknown function DUF841","Os03g0721400",-1.2489619]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400",null,"Os03g0728800","RNA helicase 16","Os03g0728800",-1.4818015]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os03g0736500","Syntaxin-related protein KNOLLE, OsKNOLLE, KNOLLE, Syntaxin of Plants 111","Os03g0736500",4.6675076]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os03g0736600","Similar to ATP synthase.","Os03g0736600",1.6710663]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000",null,"Os03g0758400","Ankyrin repeat containing protein.","Os03g0758400",1.058157]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400",null,"Os03g0787000","PSY1 homolog, syntaxin, Syntaxin of Plants121","SYP121",-1.391635]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os03g0841700","prohibitin-2","Os03g0841700",-2.6479797]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os03g0852300","DNA polymerase II subunit B3-2","DPB3-2",-1.3442526]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os04g0118100","AMI1-like protein, Amidase 1","OsAMI1",1.7287674]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os04g0408700","Similar to DNA-binding protein S1FA1.","Os04g0408700",1.0448675]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os04g0422000","fibrillin5, fibrillin 5","FBN5",4.7986236]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900",null,"Os04g0581300","Similar to Mitochondrial import inner membrane translocase subunit TIM13.","Os04g0581300",-1.6117554]
[null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200",null,"Os04g0643200","Amidase family protein.","Os04g0643200",2.5119147]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os04g0678700","NADPH: protochlorophyllide oxidoreductase A, Protochlorophyllide oxidoreductase A","PORA",12.948595]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os04g0692100","Similar to Tubulin folding cofactor B.","Os04g0692100",-1.5305247]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os05g0120100","RS domain with zinc knuckle protein 36, RSZ subfamily protein 36, RS2Z subfamily protein 36","RSZP36",-0.9550648]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os05g0383100","Clathrin adaptor, mu subunit domain containing protein.","Os05g0383100",-1.0886006]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os05g0460200","Ubiquitin-conjugating enzyme 12","UBC12",-1.1763325]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os05g0490000","KRR1 interacting protein 1 domain containing protein.","Os05g0490000",-2.0123127]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600",null,"Os05g0513800","Rac-like GTP-binding protein 2, Rac/Rop-type GTPase 2","RAC2",3.6623635]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os06g0102700","plant U-box-containing protein 12, U-box protein 12","OsPUB12",-0.9850497]
[null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os06g0196900","Similar to Chaperonin.","Os06g0196900",2.180973]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os06g0300800","WD40 repeat-like domain containing protein.","Os06g0300800",-1.0278225]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os06g0724600","Similar to Transformer-SR ribonucleoprotein (Fragment).","Os06g0724600",-1.6243286]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os08g0239000","Complex 1 LYR protein family protein.","Os08g0239000",2.1374145]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400",null,"Os08g0424200","Similar to Methylcrotonoyl-CoA carboxylase beta chain","Os08g0424200",1.094686]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os08g0528900","Similar to Transcriptional activator FHA1.","Os08g0528900",-1.1337466]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0276100","NAD-dependent isocitrate dehydrogenase a, isocitrate dehydrogenase","IDHA",-0.9880581]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600",null,"Os01g0750300","Cellulose synthase A catalytic subunit 4 [UDP-forming], Cellulose synthase A catalytic subunit 4, brittle culm 7, brittle culm11, fragile culm 17","OsP5CS2",6.6001415]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400",null,"Os02g0540700","plant U-box-containing protein 45, U-box protein 45, P3-inducible protein 1","PUB45",-2.564208]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os07g0544800","PSII subunit PsbQ, photosystem II subunit PsbQ","PSBQ",null,"Os02g0581100","Similar to photosystem II 5 kD protein.","Os02g0581100"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os06g0683200","Similar to 50S ribosomal protein L24","Os06g0683200"]
[null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor","Os03g0265400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","RPL27",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","RPL27",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400"]
[null,"Os02g0137200","50S ribosomal protein","Os02g0137200",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os03g0284400","Similar to Ribosomal protein L10-like.","Os03g0284400",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os01g0678600","Ribosomal protein S20 family protein.","Os01g0678600",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os07g0544800","PSII subunit PsbQ, photosystem II subunit PsbQ","PSBQ"]
[null,"Os07g0513000","ATP synthase g-chain, ATP synthase gamma chain, F-type ATPase gamma","Os07g0513000",null,"Os03g0736600","Similar to ATP synthase.","Os03g0736600"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os11g0707100","Hypothetical conserved gene.","Os11g0707100",null,"Os03g0758400","Ankyrin repeat containing protein.","Os03g0758400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os04g0563700","Cyclin-B2-1, G2/mitotic-specific cyclin-B2-1, B-type cyclin 2;1, cyclin Oryza sativa1","CYCB2;1",null,"Os01g0848200","pyrroline-5-carboxylate synthetase 2, proline carboxylate synthase 2, Aldehyde dehydrogenase 18B2","OsP5CS2"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os06g0726800","Cyclin-B2-2, G2/mitotic-specific cyclin-B2-2, B-type cyclin 2;2, cyclin Oryza sativa2","CYCB2;2",null,"Os01g0848200","pyrroline-5-carboxylate synthetase 2, proline carboxylate synthase 2, Aldehyde dehydrogenase 18B2","OsP5CS2"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3"]
[null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os07g0556200","Rieske Fe-S precursor protein","PETC",null,"Os05g0480000","STN8 kinase","STN8"]
[null,"Os02g0125000","Similar to LPA2 (low psii accumulation2).","Os02g0125000",null,"Os01g0151200","Similar to Inner membrane protein ALBINO3","Os01g0151200"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os01g0805000","50S ribosomal protein L34.","Os01g0805000"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os01g0678600","Ribosomal protein S20 family protein","Os01g0678600"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os04g0461100","Ribosomal protein, PSRP-3/Ycf65 domain containing protein.","Os04g0461100",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os01g0278900","ribosomal protein L5, 50 S ribosomal gene RPL5","Os01g0278900"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0189000","Similar to Chloroplast 30S ribosomal protein S21 (Fragment).","Os02g0189000"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os11g0550800","Similar to plastid-specific ribosomal protein 6.","Os11g0550800",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os06g0308000","trigger factor-like protein","OsTIG",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400"]
[null,"Os04g0457000","light-harvesting protein CP24, PSII CP24, light-harvesting complex subunit b6","Os04g0457000",null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX"]
[null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX",null,"Os02g0581100","Similar to photosystem II 5 kD protein.","Os02g0581100"]
[null,"Os07g0544800","PSII subunit PsbQ, photosystem II subunit PsbQ","PSBQ",null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX"]
[null,"Os09g0422500","Cellulose synthase A catalytic subunit 9","Os09g0422500",null,"Os01g0750300","Cellulose synthase A catalytic subunit 4 [UDP-forming], Cellulose synthase A catalytic subunit 4, brittle culm 7, brittle culm11, fragile culm 17","OsP5CS2"]
[null,"Os07g0544800","PSII subunit PsbQ, photosystem II subunit PsbQ","PSBQ",null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500"]
[null,"Os07g0657900","NADPH thioredoxin reductase, GRX-like protein 15, glutaredoxin-like protein 15, chloroplastic type NTR, chloroplastic type NADPH-dependent thioredoxin reductase","NTRC",null,"Os01g0963400","Thioredoxin family protein.","Os01g0963400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os06g0594100","crotonase","CRO"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os10g0388600","Hypothetical conserved gene.","Os10g0388600",null,"Os01g0918200","Small ubiquitin like modifier, SUMO family protein","Os01g0918200"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os06g0308000","trigger factor-like protein","OsTIG"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os11g0544800","glutamyl-tRNA(Gln) amidotransferase B subunit family protein, glutamyl-tRNA(Gln) amidotransferase B subunit","GATB",null,"Os04g0643200","Amidase family protein.","Os04g0643200"]
[null,"Os11g0544800","glutamyl-tRNA(Gln) amidotransferase B subunit family protein, glutamyl-tRNA(Gln) amidotransferase B subunit","GATB",null,"Os04g0118100","AMI1-like protein, Amidase 1","OsAMI1"]
[null,"Os10g0492300","Similar to IAP100.","Os10g0492300",null,"Os01g0151200","Similar to Inner membrane protein ALBINO3","Os01g0151200"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os08g0553800","NAD(P)-binding domain containing protein","Os08g0553800",null,"Os02g0747400","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 9","TCP9"]
[null,"Os12g0541500","Similar to Elongation factor Ts.","Os12g0541500",null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os08g0117000","pollen semi-sterility 1, pollen semi-sterile 1, Pollen semi-sterility1, Pollen semisterility1, Pollen semisterility 1","PSS1",null,"Os02g0708400","Tetratricopeptide-like helical domain containing protein.","Os02g0708400"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os06g0594100","crotonase","CRO",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os06g0683200","Similar to 50S ribosomal protein L24","Os06g0683200"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500",null,"Os03g0343900","PSII subunit PsbX, photosystem II subunit PsbX","PSBX"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os02g0794400","Similar to Translation initiation factor IF-3","Os02g0794400"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os05g0101400","Similar to 50S ribosomal protein L28","Os05g0101400"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os07g0164200","Similar to cDNA clone:001-026-G04, full insert sequence.","Os07g0164200",null,"Os01g0191800","Aurora-B","Os01g0191800"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os02g0581100","Similar to photosystem II 5 kD protein.","Os02g0581100"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os07g0656500","Magnesium-chelatase subunit H","chlH",null,"Os06g0196900","Similar to Chaperonin.","Os06g0196900"]
[null,"Os05g0587300","Molecular chaperone, heat shock protein","Os05g0587300",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF"]
[null,"Os06g0140700","rice homeobox gene 2, Homeobox-leucine zipper protein HOX2, Homeodomain transcription factor HOX2, HD-ZIP protein HOX2","HOX2",null,"Os03g0309800","Similar to PPR2.","Os03g0309800"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os06g0594100","crotonase","CRO",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os12g0541500","Similar to Elongation factor Ts.","Os12g0541500",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000"]
[null,"Os04g0419600","Histone H3.","Os04g0419600",null,"Os01g0191800","Aurora-B","Os01g0191800"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os02g0747400","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 9","TCP9",null,"Os01g0963400","Thioredoxin family protein.","Os01g0963400"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0284400","Similar to Ribosomal protein L10-like","Os03g0284400"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os02g0822600","Similar to 50S ribosomal protein L9.","Os02g0822600"]
[null,"Os10g0214132","Similar to ribosomal protein L2.","Os10g0214132",null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100"]
[null,"Os12g0563200","thermo-sensitive chlorophyll-deficient mutant 11, plastid ribosomal protein S6","TCD11",null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os03g0769100","Chloroplast ribosomal protein S9","Os03g0769100"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os02g0259600","ribosomal protein L21, ribosomal protein large subunit 21","RPL21"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os04g0457000","light-harvesting protein CP24, PSII CP24, light-harvesting complex subunit b6","Os04g0457000"]
[null,"Os06g0594100","crotonase","CRO",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os05g0101400","Similar to 50S ribosomal protein L28, chloroplast precursor.","Os05g0101400",null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os06g0726800","Cyclin-B2-2, G2/mitotic-specific cyclin-B2-2, B-type cyclin 2;2, cyclin Oryza sativa2","CYCB2;2",null,"Os01g0191800","Aurora-B","Os01g0191800"]
[null,"Os04g0563700","Cyclin-B2-1, G2/mitotic-specific cyclin-B2-1, B-type cyclin 2;1, cyclin Oryza sativa1","CYCB2;1",null,"Os01g0191800","Aurora-B","Os01g0191800"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os07g0148900","PSI subunit PsaK, photosystem I subunit PsaK, PSI subunit X","PSAK"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os07g0577600","PSI type II chlorophyll a/b-binding protein, light- harvesting complex I chlorophyll a/b binding protein 2","Os07g0577600"]
[null,"Os12g0189400","PSI subunit N, Photosystem I reaction center subunit n, PSI reaction center subunit n, photosystem I subunit PsaN","PSAN",null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R"]
[null,"Os12g0420400","PSI subunit PsaL, photosystem I subunit PsaL, \\Photosystem I reaction center subunit XI, chloroplastic\\\"\"","PSAL",null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os08g0435900","chlorophyll a/b binding protein, light-harvesting chlorophyll a/b binding protein, cab gene from Norin 8, delayed yellowing 1, light-harvesting complex subunit a4","DYE1"]
[null,"Os09g0481200","PSI subunit PsaG, photosystem I subunit PsaG","PSAG",null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os03g0778100","PSI subunit PsaF, photosystem I subunit PsaF, PHOTOSYSTEM 1-F subunit","PSAF"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os06g0320500","light-harvesting complex subunit a1","LHCA1"]
[null,"Os09g0346500","\\Chlorophyll a-b binding protein 1, chloroplast precursor\\\", \\\"Chlorophyll a-b binding protein 1, chloroplast\\\", LHCII type I CAB-1, LHCII type I CAB, chlorophyll a/b-binding protein 1, light-harvesting chlorophyll a/b binding protein 1, PSII Cab1\"","CAB1R",null,"Os02g0197600","PSI type III chlorophyll a/b-binding protein, light-harvesting complex subunit a3","LHCA3"]
[null,"Os05g0186000","Similar to 30S ribosomal protein S31, chloroplast (Fragment).","Os05g0186000",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os01g0924000","plastid ribosomal protein L27, plastid RPL27 protein","Os01g0924000"]
[null,"Os05g0480000","STN8 kinase","STN8",null,"Os04g0563700","Cyclin-B2-1, G2/mitotic-specific cyclin-B2-1, B-type cyclin 2;1, cyclin Oryza sativa1","CYCB2;1"]
[null,"Os06g0726800","Cyclin-B2-2, G2/mitotic-specific cyclin-B2-2, B-type cyclin 2;2, cyclin Oryza sativa2","CYCB2;2",null,"Os05g0480000","STN8 kinase","STN8"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os06g0594100","crotonase","CRO",null,"Os01g0749200","chloroplast ribosomal protein L13, chloroplast RPL13, white leaf and panicle one, white leaf and panicle 1, white leaf and panicles 1","Os01g0749200"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os02g0754300","Ribosomal protein L29 family protein.","Os02g0754300"]
[null,"Os07g0570700","Ribosome recycling factor family protein.","Os07g0570700",null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100"]
[null,"Os12g0277500","chaperonin 60 alpha subunit 1","OsCPn60a1",null,"Os06g0196900","Similar to Chaperonin.","Os06g0196900"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os03g0219900","Similar to 50S ribosomal protein L15","Os03g0219900"]
[null,"Os08g0427700","Histone H2A.","Os08g0427700",null,"Os01g0835900","Histone H4","Os01g0835900"]
[null,"Os03g0592500","light-harvesting chlorophyll a/b-binding protein b2.1","Os03g0592500",null,"Os02g0581100","Similar to photosystem II 5 kD protein.","Os02g0581100"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os03g0452300","Ribosomal protein S5, bacterial-type domain containing protein.","Os03g0452300"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os03g0815400","Ribosomal protein L17-like protein.","Os03g0815400"]
[null,"Os12g0530000","Histone H2A IV","Os12g0530000",null,"Os01g0835900","Histone H4","Os01g0835900"]
[null,"Os10g0564500","stress/ABA-activated protein kinase 3, rice endosperm protein kinase, Stress-Activated Protein Kinase 3, Sucrose nonfermenting-1-related protein kinase 2.3","SAPK3",null,"Os07g0656500","Magnesium-chelatase subunit H","chlH"]
[null,"Os01g0963400","Thioredoxin family protein.","Os01g0963400",null,"Os01g0621300","Hypothetical conserved gene","Os01g0621300"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os06g0683200","Similar to 50S ribosomal protein L24","Os06g0683200"]
[null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os04g0419600","Histone H3.","Os04g0419600",null,"Os01g0835900","Histone H4","Os01g0835900"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os08g0533600","ACT-domain repeat protein 8","ACR8",null,"Os03g0637800","CRINKLY4, rice CRINKLY4 orthologue, CR4 ortholog","MIS2"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0125000","Chloroplast 50S ribosomal protein","Os03g0125000"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0751400","Similar to 50S ribosomal protein l6.","Os03g0751400"]
[null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400",null,"Os03g0265400","Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).","Os03g0265400"]
[null,"Os12g0115900","Translation elongation factor P domain containing protein.","Os12g0115900",null,"Os03g0704000","Similar to 30S ribosomal protein S13.","Os03g0704000"]
[null,"Os03g0315800","plastid 30S ribosomal protein S1, albino seedling lethality 4","ASL4",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os06g0683200","Similar to 50S ribosomal protein L24, chloroplast precursor (CL24).","Os06g0683200",null,"Os03g0271400","Armadillo-like helical domain containing protein.","Os03g0271400"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os02g0137200","50S ribosomal protein","Os02g0137200"]
[null,"Os04g0538100","Elongation factor G, III and V domain containing protein.","Os04g0538100",null,"Os03g0122200","Similar to 50S ribosomal protein L11.","Os03g0122200"]
[null,"Os02g0747400","TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 9","TCP9",null,"Os02g0174000","Myb-like DNA-binding domain","Os02g0174000"]
[null,"Os12g0530000","Histone H2A IV","Os12g0530000",null,"Os04g0419600","Histone H3","Os04g0419600"]
[null,"Os08g0427700","Histone H2A.","Os08g0427700",null,"Os04g0419600","Histone H3","Os04g0419600"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os10g0488100","Similar to prefoldin subunit 5.","Os10g0488100",null,"Os03g0628900","Prefoldin domain containing protein.","Os03g0628900"]
[null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",null,"Os10g0488100","Similar to prefoldin subunit 5.","Os10g0488100"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",null,"Os03g0628900","Prefoldin domain containing protein.","Os03g0628900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os03g0225600","Conserved oligomeric complex COG6 family protein.","Os03g0225600",null,"Os02g0456000","COG4 transport domain containing protein.","Os02g0456000"]
[null,"Os02g0506500","Similar to ubiquitin-activating enzyme E1 domain-containing protein 1.","Os02g0506500",null,"Os01g0962400","Ubiquitin-like, Ufm1 domain containing protein.","Os01g0962400"]
[null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os05g0378900","Similar to Golgi transport complex protein-related.","Os05g0378900",null,"Os02g0456000","COG4 transport domain containing protein.","Os02g0456000"]
[null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os03g0151700","Similar to WD repeat protein (Fragment).","Os03g0151700",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os05g0378900","Similar to Golgi transport complex protein-related.","Os05g0378900",null,"Os03g0225600","Conserved oligomeric complex COG6 family protein.","Os03g0225600"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os03g0402000","TRAPP I complex, Bet3 domain containing protein.","Os03g0402000",null,"Os01g0708600","TRAPP I complex, Trs31 domain containing protein.","Os01g0708600"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os11g0568500","Prefoldin domain containing protein.","Os11g0568500",null,"Os03g0628900","Prefoldin domain containing protein.","Os03g0628900"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os11g0568500","Prefoldin domain containing protein.","Os11g0568500",null,"Os10g0488100","Similar to prefoldin subunit 5.","Os10g0488100"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",null,"Os11g0568500","Prefoldin domain containing protein.","Os11g0568500"]
[null,"Os03g0766900","Allene oxide synthase.","Os03g0766900",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os03g0766900","Allene oxide synthase.","Os03g0766900"]
[null,"Os03g0766900","Allene oxide synthase.","Os03g0766900",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os06g0687700","Similar to T-complex protein 1, eta subunit (TCP-1-eta)","Os06g0687700",null,"Os01g0184800","Thioredoxin fold domain containing protein.","Os01g0184800"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os07g0291100","ransport protein particle (TRAPP) component domain containing protein.","Os07g0291100",null,"Os01g0708600","TRAPP I complex, Trs31 domain containing protein.","Os01g0708600"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os03g0766900","Allene oxide synthase.","Os03g0766900"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os04g0402100","Calnexin","CNX",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os03g0766900","Allene oxide synthase.","Os03g0766900"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0291100","ransport protein particle (TRAPP) component domain containing protein.","Os07g0291100",null,"Os03g0402000","TRAPP I complex, Bet3 domain containing protein.","Os03g0402000"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a"]
[null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600"]
[null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200"]
[null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",null,"Os01g0184000","NUC156 family protein.","Os01g0184000"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os03g0151700","Similar to WD repeat protein (Fragment).","Os03g0151700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os06g0716700","rice 90kDa heat shock protein, heat shock protein90, heat shock protein 90, glucose-regulated protein 94, endoplasmin","HSP90",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os11g0497000","SUMO-activating enzyme 1, E1 SUMO-activating enzyme 1","SAE1",null,"Os08g0374100","Ubiquitin-conjugating enzyme 5","UBC5"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os12g0613500","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132","Os12g0613500",null,"Os03g0728800","RNA helicase 16","Os03g0728800"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600"]
[null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein)","Os03g0227000",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os02g0782100","Uncharacterised domain NUC173 domain containing protein.","Os02g0782100"]
[null,"Os11g0433500","SEC23 protein","Os11g0433500",null,"Os07g0657200","WD40/YVTN repeat-like domain containing protein.","Os07g0657200"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 "]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","Os10g0573900"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B"]
[null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 ",null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600"]
[null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os03g0766900","Allene oxide synthase.","Os03g0766900",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os03g0766900","Allene oxide synthase.","Os03g0766900",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7"]
[null,"Os08g0108200","G-protein, beta subunit family protein.","Os08g0108200",null,"Os03g0640100","Multicopy suppressors of the iral 1","Os03g0640100"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os07g0573600","Component of the core general transcription and DNA repair factor IIH","Os07g0573600",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os04g0612600","Similar to Coatomer-like protein, epsilon subunit.","Os04g0612600"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700"]
[null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 ",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein)","Os03g0227000",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os03g0227000","Similar to Coatomer gamma subunit (Gamma-coat protein) (Gamma-COP).","Os03g0227000"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os02g0122300","brassinosteroid receptor kinase (BRI1)-interacting protein 121, BRI1-interacting protein 121, brassinosteroid receptor kinase-interacting protein 121","Os02g0122300",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os12g0134300","Conserved hypothetical protein.","Os12g0134300",null,"Os02g0220500","elongation factor 1-gamma","EF1G"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os03g0728800","RNA helicase 16","Os03g0728800"]
[null,"Os11g0104900","Clathrin heavy chain binding","Os11g0104900",null,"Os01g0276100","NAD-dependent isocitrate dehydrogenase a, isocitrate dehydrogenase","IDHA"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400"]
[null,"Os12g0156400","Dcp1-like decapping family protein.","Os12g0156400",null,"Os02g0722800","WD40 repeat-like domain containing protein.","Os02g0722800"]
[null,"Os12g0156400","Dcp1-like decapping family protein.","Os12g0156400",null,"Os06g0300800","WD40 repeat-like domain containing protein.","Os06g0300800"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os03g0728800","RNA helicase 16","Os03g0728800"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800",null,"Os01g0805800","DNA-directed RNA polymerase, RPB5 subunit domain containing protein.","Os01g0805800"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os05g0461000","Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein.","Os05g0461000",null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 "]
[null,"Os06g0716700","rice 90kDa heat shock protein, heat shock protein90, heat shock protein 90, glucose-regulated protein 94, endoplasmin","HSP90",null,"Os04g0402100","Calnexin","CNX"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10.","Os02g0114700"]
[null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os04g0462900","Similar to prohibitin2.","Os04g0462900",null,"Os03g0841700","prohibitin-2","Os03g0841700"]
[null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 ",null,"Os03g0711400","Similar to Coatomer alpha subunit.","Os03g0711400"]
[null,"Os07g0262200","narrow leaf 8","NAL8",null,"Os04g0462900","Similar to prohibitin2.","Os04g0462900"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7"]
[null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 ",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000",null,"Os01g0833700","Clathrin adaptor, mu subunit, C-terminal domain containing protein.","Os01g0833700"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os05g0310800","coatomer subunit delta protein 1","DELTA-COP1 "]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os03g0640100","Multicopy suppressors of the iral 1","Os03g0640100",null,"Os01g0193900","ALWAYS EARLYLIKE1","ALYL1"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os03g0787000","PSY1 homolog, syntaxin, Syntaxin of Plants121","SYP121"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os06g0168500","Syntaxin of Plants131","SYP131",null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0647900","RNA helicase 57","Os07g0647900",null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os07g0246200","calreticulin 1, calreticulin","Os07g0246200",null,"Os06g0716700","rice 90kDa heat shock protein, heat shock protein90, heat shock protein 90, glucose-regulated protein 94, endoplasmin","HSP90"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os12g0134300","Conserved hypothetical protein.","Os12g0134300",null,"Os07g0573600","Component of the core general transcription and DNA repair factor IIH, Cd tolerance, Ultraviolet-B (UVB) tolerance","Os07g0573600"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os03g0669000","ATP-dependent RNA helicase DDX47, RNA helicase 10, thermotolerant growth required1","OsRH10",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os02g0220500","elongation factor 1-gamma","EF1G"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os07g0633200","SC35-like protein 25, SCL subfamily protein 25","SCL25",null,"Os05g0120100","RS domain with zinc knuckle protein 36, RSZ subfamily protein 36, RS2Z subfamily protein 36","RSZP36"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os08g0116500","Ribosomal protein L12eII, Acidic ribosomal protein P2, Ribosomal protein rp21c","Os08g0116500",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os07g0573600","Component of the core general transcription and DNA repair factor IIH","Os07g0573600",null,"Os01g0805800","DNA-directed RNA polymerase, RPB5 subunit domain containing protein.","Os01g0805800"]
[null,"Os01g0654500","isocitrate dehydrogenase, isocitrate dehydrogenase (NADP+)","ICDH",null,"Os01g0276100","NAD-dependent isocitrate dehydrogenase a, isocitrate dehydrogenase","IDHA"]
[null,"Os08g0422300","Conserved hypothetical protein.","Os08g0422300",null,"Os05g0148300","Ribosomal protein S27/S33, mitochondrial domain containing protein.","Os05g0148300"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K"]
[null,"Os12g0244200","Ribosomal protein L37","Os12g0244200",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10","Os02g0114700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0684800","Ubc-E2 variant 1D","OsUEV1D",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os12g0134300","Conserved hypothetical protein.","Os12g0134300",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os06g0198800","Similar to 25.3 kDa vesicle transport protein.","Os06g0198800",null,"Os02g0126800","Similar to Golgi SNARE 12 protein (AtGOS12)","Os02g0126800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os11g0660500","21 kDa polypeptide, translationally controlled tumor protein, TCTP homolog, Tumor protein homolog","Os11g0660500",null,"Os02g0220500","elongation factor 1-gamma","EF1G"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os11g0433500","SEC23 protein","Os11g0433500",null,"Os06g0198800","Similar to 25.3 kDa vesicle transport protein.","Os06g0198800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os06g0687700","Similar to T-complex protein 1, eta subunit (TCP-1-eta)","Os06g0687700",null,"Os02g0245100","Similar to Peroxisomal targeting signal type 2 receptor.","Os02g0245100"]
[null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os12g0613500","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132","Os12g0613500",null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K"]
[null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23",null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os09g0347700","Similar to Sec61p.","Os09g0347700"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os08g0359500","CS domain domain containing protein.","Os08g0359500",null,"Os04g0692100","Similar to Tubulin folding cofactor B.","Os04g0692100"]
[null,"Os12g0134300","Conserved hypothetical protein.","Os12g0134300",null,"Os01g0805800","DNA-directed RNA polymerase, RPB5 subunit domain containing protein.","Os01g0805800"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os07g0647900","RNA helicase 57","Os07g0647900",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10.","Os02g0114700"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",null,"Os03g0728800","RNA helicase 16","Os03g0728800"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0104900","Clathrin heavy chain binding","Os11g0104900",null,"Os01g0355500","DnaJ domain protein C5","Os01g0355500"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os05g0111100","Zinc finger, Tim10/DDP-type family protein.","Os05g0111100",null,"Os04g0581300","Similar to Mitochondrial import inner membrane translocase subunit TIM13.","Os04g0581300"]
[null,"Os02g0740300","ATPase, AAA-type, core domain containing protein.","Os02g0740300",null,"Os02g0504500","PUG domain containing protein.","Os02g0504500"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os04g0577000","Similar to H0404F02.2 protein.","Os04g0577000",null,"Os02g0740300","ATPase, AAA-type, core domain containing protein.","Os02g0740300"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os04g0488100","Rad21-2 protein","RAD21-2",null,"Os02g0135300","protein kinase Wee1","WEE1"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os08g0529100","Similar to Proteasome subunit beta type 1","Os08g0529100",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os05g0495700","glycerol-3-phosphate dehydrogenase 1","OsGPDH1-1",null,"Os02g0717700","Acyl-CoA N-acyltransferase domain containing protein.","Os02g0717700"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os11g0104900","Clathrin heavy chain binding","Os11g0104900",null,"Os02g0806600","ENTH/VHS domain containing protein.","Os02g0806600"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os05g0539700","nucleosome assembly protein 1-like protein 2, Nucleosome assembly protein 1;2, NAP1-like protein 2","Os05g0539700",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os05g0460200","Ubiquitin-conjugating enzyme 12","UBC12"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os05g0460200","Ubiquitin-conjugating enzyme 12","UBC12"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os07g0691800","rice homolog of human 26S protease subunit 4, rice homolog of human 26S protease S4, 19S regulatory particle ATPase subunit 2a, RP triple A-ATPase 2a","OsRpt2a",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os03g0261900","Similar to HEAT repeat family protein, expressed.","Os03g0261900",null,"Os02g0220500","elongation factor 1-gamma","EF1G"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os08g0521400","Similar to Zn-finger, RanBP-type, containing protein.","Os08g0521400",null,"Os02g0654400","Transcription initiation factor TFIID component TAF4 domain containing protein.","Os02g0654400"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os06g0502900","Similar to DGCR14 protein.","Os06g0502900",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os09g0439600","Exo70 exocyst complex subunit family protein.","Os09g0439600",null,"Os02g0749500","Similar to SEC6.","Os02g0749500"]
[null,"Os06g0698600","exocyst subunit EXO70 family protein G2","EXO70G2",null,"Os02g0749500","Similar to SEC6.","Os02g0749500"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os05g0490800","Similar to Proteasome subunit alpha type.","Os05g0490800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os02g0814700","ribosomal protein 117","Os02g0814700",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os04g0402100","Calnexin","CNX",null,"Os02g0115900","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2","OsBiP1"]
[null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os09g0515100","Similar to bromodomain protein 103.","Os09g0515100",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10.","Os02g0114700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0962400","Ubiquitin-like, Ufm1 domain containing protein.","Os01g0962400"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11",null,"Os01g0120800","Similar to Eukaryotic translation initiation factor 3 subunit 10","Os01g0120800"]
[null,"Os09g0454600","phosphate transporter 19","PT19",null,"Os03g0721400","Protein of unknown function DUF841","Os03g0721400"]
[null,"Os03g0182700","\\eukaryotic translation initiation factor 3, subunit k\\\", Eukaryotic translation initiation factor 3 subunit k\"","EIF3K",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os03g0225600","Conserved oligomeric complex COG6 family protein.","Os03g0225600",null,"Os02g0220500","elongation factor 1-gamma","EF1G"]
[null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",null,"Os02g0784700","19S regulatory particle ATPase subunit 1b, RP triple A-ATPase 1b","RPT1B"]
[null,"Os03g0194500","Similar to Protein translocase/ protein transporter.","Os03g0194500",null,"Os03g0114900","Similar to putaive mitochondrial inner membrane protein","Os03g0114900"]
[null,"Os02g0761200","Armadillo-like helical domain containing protein.","Os02g0761200",null,"Os02g0540700","plant U-box-containing protein 45, U-box protein 45, P3-inducible protein 1","PUB45"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os02g0182500","Similar to Proteasome subunit beta type 3","Os02g0182500"]
[null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os08g0359500","CS domain domain containing protein.","Os08g0359500"]
[null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",null,"Os08g0359500","CS domain domain containing protein.","Os08g0359500"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os08g0359500","CS domain domain containing protein.","Os08g0359500"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os06g0176000","20S proteasome alpha3 subunit","OsPAC1"]
[null,"Os03g0651100","Rhomboid 9, RHOMBOID 9","OsRhmbd9",null,"Os02g0740300","ATPase, AAA-type, core domain containing protein.","Os02g0740300"]
[null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os09g0407900","ubiquitin-specific processing protease 9-2, Ubiquitin-specific protease 34","UBP9-2",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10.","Os02g0114700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os02g0178400","Protein transport protein SEC61 gamma subunit.","Os02g0178400"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0151700","Similar to WD repeat protein (Fragment)","Os03g0151700"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os02g0114700","Similar to Phosphorylation regulatory protein HP-10.","Os02g0114700"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800",null,"Os02g0134300","Transcription Elongation Factor 1","Os02g0134300"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900"]
[null,"Os04g0501000","Nucleotide-binding, alpha-beta plait domain containing protein.","Os04g0501000",null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0718100","Actin1, Actin-1, Actin1*(act1), actin 1, Actin 11","ACT1",null,"Os02g0817200","WD-40 repeat containing protein.","Os02g0817200"]
[null,"Os03g0783000","Similar to Actin-related protein 7.","Os03g0783000",null,"Os02g0817200","WD-40 repeat containing protein.","Os02g0817200"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0836000","Actin 3","Os03g0836000",null,"Os02g0817200","WD-40 repeat containing protein.","Os02g0817200"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os11g0104900","Clathrin heavy chain binding","Os11g0104900",null,"Os03g0130500","EF hand domain containing protein.","Os03g0130500"]
[null,"Os11g0174000","Coatomer, beta subunit domain containing protein.","Os11g0174000",null,"Os05g0383100","Clathrin adaptor, mu subunit domain containing protein.","Os05g0383100"]
[null,"Os02g0817200","Similar to actin-related protein 2/3 complex subunit 1B.","Os02g0817200",null,"Os01g0184800","Thioredoxin fold domain containing protein.","Os01g0184800"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os02g0782100","Uncharacterised domain NUC173 domain containing protein.","Os02g0782100"]
[null,"Os04g0485000","19S regulatory particle non-ATPase subunit 7, RP non-ATPase 7","RPN7",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",null,"Os05g0579800","Similar to Anaphase promoting complex subunit 10 (APC10)","Os05g0579800"]
[null,"Os03g0151700","Similar to WD repeat protein (Fragment).","Os03g0151700",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os03g0833700","RNA 3'-terminal phosphate cyclase family protein.","Os03g0833700",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os01g0924800","ribosomal protein","Os01g0924800",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os11g0148600","Conserved hypothetical protein.","Os11g0148600",null,"Os11g0104900","Clathrin heavy chain binding","Os11g0104900"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os11g0497000","SUMO-activating enzyme 1, E1 SUMO-activating enzyme 1","SAE1",null,"Os01g0962400","Ubiquitin-like, Ufm1 domain containing protein.","Os01g0962400"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os05g0490000","KRR1 interacting protein 1 domain containing protein.","Os05g0490000"]
[null,"Os07g0209000","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit, dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1, Glycosyltransferase 48 kDa subunit precursor","OsDGL1",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os02g0220500","elongation factor 1-gamma","EF1G",null,"Os02g0135300","protein kinase Wee1","WEE1"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os05g0555800","Similar to 60S ribosomal protein L35a-3.","Os05g0555800",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os10g0377400","small GTP-binding protein OsRab11E1","OsRab11E1",null,"Os06g0102700","plant U-box-containing protein 12, U-box protein 12","OsPUB12"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os02g0115900","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2","OsBiP1"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os04g0684800","Ubc-E2 variant 1D","OsUEV1D"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os09g0407900","ubiquitin-specific processing protease 9-2, Ubiquitin-specific protease 34","UBP9-2",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os04g0684800","Ubc-E2 variant 1D","OsUEV1D"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os01g0267200","19S regulatory particle non-ATPase subunit 11, RP non-ATPase 11","RPN11"]
[null,"Os05g0490100","Similar to 60S ribosomal protein L30.","Os05g0490100",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os02g0519900","elongation factor 2","Os02g0519900"]
[null,"Os08g0532500","Hypothetical conserved gene","Os08g0532500",null,"Os01g0805800","DNA-directed RNA polymerase, RPB5 subunit domain containing protein.","Os01g0805800"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400"]
[null,"Os02g0134300","Transcription Elongation Factor 1","Os02g0134300",null,"Os01g0805800","DNA-directed RNA polymerase, RPB5 subunit domain containing protein.","Os01g0805800"]
[null,"Os08g0504700","Gibberellin-induced A20/AN1 zinc-finger protein","Os08g0504700",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os08g0532500","Hypothetical conserved gene","Os08g0532500",null,"Os07g0573600","Component of the core general transcription and DNA repair factor IIH, Cd tolerance, Ultraviolet-B (UVB) tolerance","Os07g0573600"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os01g0679700","Similar to 60S ribosomal protein L37a.","Os01g0679700"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100",null,"Os01g0911200","Glycosyltransferase 63 kDa subunit precursor, Ribophorin II","Os01g0911200"]
[null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200"]
[null,"Os05g0528200","Similar to 50S ribosomal protein L20.","Os05g0528200",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os10g0183900","Ribosomal RNA adenine methylase transferase family protein.","Os10g0183900",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os02g0135300","protein kinase Wee1","WEE1"]
[null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",null,"Os02g0135300","protein kinase Wee1","WEE1"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os02g0135300","protein kinase Wee1","WEE1"]
[null,"Os07g0239400","small GTP-binding protein OsRab8A3","OsRab8A3",null,"Os03g0238300","Endonuclease/exonuclease/phosphatase domain containing protein.","Os03g0238300"]
[null,"Os03g0819900","small GTP-binding protein OsRab8A5","OsRab8A5",null,"Os03g0238300","Endonuclease/exonuclease/phosphatase domain containing protein.","Os03g0238300"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os02g0105900","Ribosomal protein S4X","Os02g0105900"]
[null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900",null,"Os01g0752700","Similar to GTP-binding protein.","Os01g0752700"]
[null,"Os04g0684800","Ubc-E2 variant 1D","OsUEV1D",null,"Os01g0962400","Ubiquitin-like, Ufm1 domain containing protein.","Os01g0962400"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0515100","Similar to bromodomain protein 103.","Os09g0515100",null,"Os02g0634900","OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunit","OsPAB2"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23"]
[null,"Os12g0613500","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132","Os12g0613500",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os09g0407900","ubiquitin-specific processing protease 9-2, Ubiquitin-specific protease 34","UBP9-2"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os05g0579800","Similar to Anaphase promoting complex subunit 10 (APC10)","Os05g0579800",null,"Os05g0539700","nucleosome assembly protein 1-like protein 2, Nucleosome assembly protein 1;2, NAP1-like protein 2","Os05g0539700"]
[null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1",null,"Os01g0355500","DnaJ domain protein C5","Os01g0355500"]
[null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900",null,"Os01g0355500","DnaJ domain protein C5","Os01g0355500"]
[null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100",null,"Os01g0355500","DnaJ domain protein C5","Os01g0355500"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os10g0573900","60S ribosomal subunit nuclear export adaptor NMD3","NMD3",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os08g0532500","Hypothetical conserved gene","Os08g0532500",null,"Os01g0528000","transcription factor class C1","TFC1"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800"]
[null,"Os06g0143900","beta prime COP coatomer protein","Os06g0143900",null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400"]
[null,"Os05g0519400","N-ethylmaleimide-sensitive factor","Os05g0519400",null,"Os02g0209000","Hypothetical conserved gene.","Os02g0209000"]
[null,"Os05g0475300","VHS domain containing protein.","Os05g0475300",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os06g0343100","Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8).","Os06g0343100",null,"Os01g0104800","Sas10/Utp3 family protein.","Os01g0104800"]
[null,"Os12g0562900","Prefoldin domain containing protein.","Os12g0562900",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200",null,"Os01g0900900","Ovarian tumour, otubain domain containing protein.","Os01g0900900"]
[null,"Os09g0515100","Similar to bromodomain protein 103.","Os09g0515100",null,"Os03g0214600","19S regulatory particle non-ATPase subunit 9b, RP non-ATPase 9b","RPN9B"]
[null,"Os09g0407200","Probable DNA repair protein RAD23","RAD23",null,"Os03g0851300","19S regulatory particle non-ATPase subunit 5, RP non-ATPase 5","RPN5"]
[null,"Os09g0515100","Similar to bromodomain protein 103.","Os09g0515100",null,"Os01g0511300","19S regulatory particle non-ATPase subunit 9a, RP non-ATPase 9a","RPN9A"]
[null,"Os10g0183900","Ribosomal RNA adenine methylase transferase family protein.","Os10g0183900",null,"Os06g0134000","ribosomal protein small subunit 20, r-protein S20, ribosomal protein S20","RPS20"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os11g0463600","Similar to FHA domain containing protein, expressed.","Os11g0463600",null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B"]
[null,"Os11g0463600","Similar to FHA domain containing protein, expressed.","Os11g0463600",null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os08g0528900","Similar to Transcriptional activator FHA1.","Os08g0528900"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os11g0463600","Similar to FHA domain containing protein, expressed.","Os11g0463600"]
[null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",null,"Os08g0528900","Similar to Transcriptional activator FHA1.","Os08g0528900"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os08g0528900","Similar to Transcriptional activator FHA1.","Os08g0528900"]
[null,"Os02g0245100","Similar to Peroxisomal targeting signal type 2 receptor.","Os02g0245100",null,"Os01g0184800","Thioredoxin fold domain containing protein.","Os01g0184800"]
[null,"Os06g0687700","Similar to T-complex protein 1, eta subunit (TCP-1-eta)","Os06g0687700",null,"Os01g0254100","TOPLESS-RELATED PROTEIN 1","Os01g0254100"]
[null,"Os06g0687700","Similar to T-complex protein 1, eta subunit (TCP-1-eta)","Os06g0687700",null,"Os01g0776400","Similar to predicted protein.","Os01g0776400"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os03g0366000","Similar to Chaperonin.","Os03g0366000",null,"Os03g0143400","heat-shock protein 60","Os03g0143400"]
[null,"Os07g0641700","Similar to 10 kDa chaperonin","Os07g0641700",null,"Os02g0102900","chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain","OsCPn60b2"]
[null,"Os10g0462900","58K antigen, HypB protein","Os10g0462900",null,"Os07g0641700","Similar to 10 kDa chaperonin","Os07g0641700"]
[null,"Os03g0366000","Similar to Chaperonin.","Os03g0366000",null,"Os02g0102900","chaperonin 60 beta subunit 2, chaperonin 62.5K beta-chain","OsCPn60b2"]
[null,"Os07g0641700","Similar to 10 kDa chaperonin","Os07g0641700",null,"Os03g0143400","heat-shock protein 60","Os03g0143400"]
[null,"Os10g0462900","58K antigen, HypB protein","Os10g0462900",null,"Os03g0366000","Similar to Chaperonin.","Os03g0366000"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900"]
[null,"Os11g0220800","Similar to 60S ribosomal protein L10 (QM protein homolog).","Os11g0220800",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os09g0407900","ubiquitin-specific processing protease 9-2, Ubiquitin-specific protease 34","UBP9-2",null,"Os06g0724600","Similar to Transformer-SR ribonucleoprotein (Fragment).","Os06g0724600"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100"]
[null,"Os08g0542100","Similar to 60S ribosomal protein L7.","Os08g0542100",null,"Os01g0565900","Similar to Protein transport protein Sec61 beta subunit.","Os01g0565900"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os08g0174500","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"","HD5",null,"Os06g0667100","Nuclear factor Y C4 subunit, Nuclear factor Y C subunit 4, NUCLEAR FACTOR-Y subunit C4, NUCLEAR FACTOR-Y subunit NF-YC4, NF-YC subunit 4, NF-YC family 4","HAP5B"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os08g0532500","Hypothetical conserved gene","Os08g0532500",null,"Os03g0646800","Similar to DNA-directed RNA polymerase.","Os03g0646800"]
[null,"Os02g0519900","elongation factor 2","Os02g0519900",null,"Os01g0721900","Similar to Nuclear RNA binding protein B (Fragment).","Os01g0721900"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os09g0347700","Similar to Sec61p.","Os09g0347700"]
[null,"Os07g0674200","Similar to 60S ribosomal protein L22-2.","Os07g0674200",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os05g0463800","rice HAP3C, Nuclear transcription factor Y subunit B-4, Transcriptional activator HAP3C, NUCLEAR FACTOR-Y subunit B3, NUCLEAR FACTOR-Y subunit NF-YB3, NF-YB subunit 3, NF-YB family 3","HAP3C",null,"Os03g0852300","DNA polymerase II subunit B3-2","DPB3-2"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1"]
[null,"Os06g0128400","WD40 repeat-like domain containing protein.","Os06g0128400",null,"Os04g0502300","Similar to 40S ribosomal protein S11.","Os04g0502300"]
[null,"Os01g0846800","Regulator of chromosome condensation","Os01g0846800",null,"Os01g0253300","Importin alpha-1a subunit.","Os01g0253300"]
[null,"Os03g0296300","Similar to mitochondrial import inner membrane translocase subunit tim22.","Os03g0296300",null,"Os03g0114900","Similar to putaive mitochondrial inner membrane protein","Os03g0114900"]
[null,"Os03g0780400","actin depolymerizing factor 2","ADF2",null,"Os03g0718100","Actin1, Actin-1, Actin1*(act1), actin 1, Actin 11","ACT1"]
[null,"Os11g0604700","Thioredoxin domain 2 containing protein.","Os11g0604700",null,"Os02g0245100","Similar to Peroxisomal targeting signal type 2 receptor.","Os02g0245100"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os05g0148300","Ribosomal protein S27/S33","Os05g0148300",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0420800","Similar to Ubiquitin.","Os09g0420800",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1"]
[null,"Os06g0498500","Nucleolar complex-associated protein 3","NOC3",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600"]
[null,"Os03g0836000","Actin 3","Os03g0836000",null,"Os02g0663800","actin depolymerizing factor 1","ADF1"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os03g0783000","Similar to Actin-related protein 7.","Os03g0783000",null,"Os03g0780400","actin depolymerizing factor 2","ADF2"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os06g0195900","NOG, C-terminal domain containing protein.","Os06g0195900"]
[null,"Os03g0718100","Actin1, Actin-1, Actin1*(act1), actin 1, Actin 11","ACT1",null,"Os02g0663800","actin depolymerizing factor 1","ADF1"]
[null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800",null,"Os01g0140500","Ribosomal protein L26, Ribosomal protein L24b","RPL26"]
[null,"Os03g0266200","enolase 3","OsEno3",null,"Os02g0601300","glyceraldehydephosphate dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH1, cytosolic glyceraldehyde-3-phosphate dehydrogenase 1","GAPC1"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900"]
[null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os11g0545000","NOP5, N-terminal domain containing protein.","Os11g0545000",null,"Os05g0490100","Similar to 60S ribosomal protein L30","Os05g0490100"]
[null,"Os03g0261900","Similar to HEAT repeat family protein, expressed.","Os03g0261900",null,"Os01g0253300","Importin alpha-1a subunit.","Os01g0253300"]
[null,"Os03g0822700","Armadillo-like helical domain containing protein.","Os03g0822700",null,"Os03g0234200","ubiquitin fused to CEP52 gene-1","Os03g0234200"]
[null,"Os06g0168600","virescent3, virescent 3, virescent-3, ribonucleotide reductase large subunit 1, RIBONUCLEOTIDE REDUCTASE 1","V3",null,"Os05g0156500","ERdj3B-like gene, ERDJ3 like, ERDJ3 like gene, DnaJ domain protein B6, ER-resident J-protein 3B","OsDjB6"]
[null,"Os04g0399000","Similar to Ribosomal protein S27.","Os04g0399000",null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600"]
[null,"Os07g0674700","Similar to 60S ribosomal protein L18.","Os07g0674700",null,"Os04g0685100","Ribosomal biogenesis regulatory protein family protein.","Os04g0685100"]
[null,"Os04g0630000","mesocotyl length candidate gene, SDA1 domain-containing protein","Os04g0630000",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0347700","Similar to Sec61p.","Os09g0347700",null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2"]
[null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900",null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2"]
[null,"Os09g0482400","80.2 kDa heat shock protein, 80.2-kD heat shock protein","HSP80.2",null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os03g0213100","SEC61 alpha subunit","Os03g0213100"]
[null,"Os12g0613500","brassinosteroid receptor kinase (BRI1)-interacting protein 132, BRI1-interacting protein 132, brassinosteroid receptor kinase-interacting protein 132","Os12g0613500",null,"Os01g0752300","Ribosomal protein L18a","Os01g0752300"]
[null,"Os11g0703900","heat shock protein 70, heat-shock protein 70, HEAT SHOCK PROTEIN 70KD, heat-shock protein cognate 70, Mediator 37_8","Os11g0703900",null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B"]
[null,"Os08g0176900","b-ZIP transcription factor 64","BZIP64",null,"Os03g0341000","ethylene response factor 66, APETALA2/ethylene-responsive element binding protein 30","ERF66"]
[null,"Os08g0174500","Heading date (QTL)-5(t), Heading date 5, HAP3H SUBUNIT OF CCAAT-BOX BINDING COMPLEX, days to heading8, days to heading on chromosome 8, NUCLEAR FACTOR-Y subunit B11, NUCLEAR FACTOR-Y subunit NF-YB11, rice heterosis 8, \\GRAIN YIELD, PLANT HEIGHT AND HEADING DATE 8\\\", Carbon Assimilation Rate 8, NF-YB subunit 11, NF-YB family 11, early flowering 8\"","HD5",null,"Os03g0852300","DNA polymerase II subunit B3-2","DPB3-2"]
[null,"Os03g0194600","Protein of unknown function DUF568","Os03g0194600",null,"Os02g0549600","ribosomal protein S10a, ribosomal protein small subunit 10a","RPS10A"]
[null,"Os09g0501200","Similar to Ribosomal L32.","Os09g0501200",null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100"]
[null,"Os06g0650100","Ubiquitin 5, Ubiquitin, NEDD8-like protein RUB2, Ubiquitin-related protein 2","OsRUB2",null,"Os01g0924800","ribosomal protein","Os01g0924800"]
[null,"Os06g0667100","Nuclear factor Y C4 subunit, Nuclear factor Y C subunit 4, NUCLEAR FACTOR-Y subunit C4, NUCLEAR FACTOR-Y subunit NF-YC4, NF-YC subunit 4, NF-YC family 4","HAP5B",null,"Os05g0463800","rice HAP3C, Nuclear transcription factor Y subunit B-4, Transcriptional activator HAP3C, NUCLEAR FACTOR-Y subunit B3, NUCLEAR FACTOR-Y subunit NF-YB3, NF-YB subunit 3, NF-YB family 3","HAP3C"]
[null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800",null,"Os02g0321900","Similar to Ribosomal protein L1.","Os02g0321900"]
[null,"Os04g0270100","Similar to GTP-binding protein.","Os04g0270100",null,"Os02g0814700","ribosomal protein 117","Os02g0814700"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os04g0399000","Similar to Ribosomal protein S27","Os04g0399000"]
[null,"Os03g0836000","Actin 3","Os03g0836000",null,"Os03g0780400","actin depolymerizing factor 2","ADF2"]
[null,"Os03g0783000","Similar to Actin-related protein 7.","Os03g0783000",null,"Os02g0663800","actin depolymerizing factor 1","ADF1"]
[null,"Os12g0514500","Similar to Heat-shock protein precursor.","Os12g0514500",null,"Os05g0460000","cytosolic HSP70-1, cytosolic heat shock protein 70-1, heat-shock protein cognate 70, Mediator 37_6","CTHSP70-1"]
[null,"Os07g0208000","Ribosomal protein S24","Os07g0208000",null,"Os03g0194900","Uncharacterised conserved protein UCP037471 domain containing protein.","Os03g0194900"]
[null,"Os08g0250700","Thioredoxin domain 2 containing protein.","Os08g0250700",null,"Os02g0245100","Similar to Peroxisomal targeting signal type 2 receptor.","Os02g0245100"]
[null,"Os09g0482100","Heat shock protein 82, Heat shock protein 81-2","HSP82B",null,"Os01g0840100","heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1","Os01g0840100"]
[null,"Os09g0501100","Ribosomal protein L32","Os09g0501100",null,"Os07g0208000","Ribosomal protein S24","Os07g0208000"]
[null,"Os08g0126300","glyceraldehydes-3-phosphate dehydrogenase, cytosolic GAPDH3, cytosolic glyceraldehyde-3-phosphate dehydrogenase 3","GAPC",null,"Os03g0266200","enolase 3","OsEno3"]
[null,"Os05g0156500","ERdj3B-like gene, ERDJ3 like, ERDJ3 like gene, DnaJ domain protein B6, ER-resident J-protein 3B","OsDjB6",null,"Os02g0115900","ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2","OsBiP1"]
[null,"Os05g0552300","G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B","Os05g0552300",null,"Os03g0758800","initiation factor eIF-5A, Eukaryotic translation initiation factor 5A-2","Os03g0758800"]
[null,"Os07g0408100","WD40 repeat-like domain containing protein.","Os07g0408100",null,"Os02g0654400","Transcription initiation factor TFIID component TAF4 domain containing protein.","Os02g0654400"]
[null,"Os03g0130500","EF hand domain containing protein.","Os03g0130500",null,"Os02g0806600","ENTH/VHS domain containing protein.","Os02g0806600"]
[null,"Os08g0374100","Ubiquitin-conjugating enzyme 5","UBC5",null,"Os02g0506500","Similar to ubiquitin-activating enzyme E1 domain-containing protein 1.","Os02g0506500"]
[null,"Os05g0301500","Glycosyltransferase 67 kDa subunit precursor, Ribophorin I","Os05g0301500",null,"Os02g0523500","cytoskeleton-associated 120 kDa RNA-binding protein, OsTudor-SN, Tudor-SN","OsTSN"]

{"sheet":"Table S10 Primer Sequences","index":9,"n_rows":31,"n_cols":10,"rows_kept":31,"merged":[[0,5,1,6],[0,8,1,9]]}
["Supplementary Table S10. List of primers used in the study for RT-qPCR validation",{"$nulls":4},"Fold change in rga1 mutant (KNO3 Vs KCl)",null,null,"Fold change in WT (KNO3 Vs KCl)"]
[]
["S. No.","Gene Symbol","MSU_Id","Forward Primer","Reverse Primer","Microarray","qRT-PCR",null,"Microarray","qRT-PCR"]
[1,"OsCRY1a","LOC_Os02g36380","TCCAACTATCCTCTCCCCATC","CCTCCATTCCGTTCTCCATC",1.6562303,1.875203874608845,null,-1.1510574,0.2750070474998698]
[2,"OsLFNR2","LOC_Os06g01850","CTCTACAAGGAGGAGTTTGACA","TCTTTTGCAGCCAATGACAC",2.1411397,1.3695659946129854,null,0,-0.18385088605097905]
[3,"Non-photo hypocot","LOC_Os02g38120","ACGAATCCGTGAGGTCTGTC","TGATGCCGTAGCAGAACTTG",4.573135,2.6440728470648214,null,4.00402,2.5127350066870897]
[4,"YL1","LOC_Os01g17170","CTGCCTCTCGGTGTATGTGAC","TGTTGATCTCCACCATCCTGT",4.379773,1.7945664648763835,null,2.9026222,2.0187244089881378]
[5,"OsDjC26","LOC_Os03g15480","AGAAGGCAAGGAAAGGTGAG","CGGCCTCTGAACATAAGATTTG",3.2925575,2.4159518781072977,null,0,0.022688179061796574]
[6,"OsGS2","LOC_Os04g56400","CCAATTCAGGGAGACTGGAA","GATATTCGGTCCGTATTTGGAT",4.2717166,2.4916049741937223,null,0,0.3790956115721632]
[7,"OsLACS1","LOC_Os05g04170","CAAGTGGGACAAGTGGAGAG","TGTGAGCAAGCGGTAGAAAG",2.0293887,1.5110345302882087,null,3.055768,1.1914554061026645]
[8,"Sugar/Inositol trans","LOC_Os04g43210","CCTTCACTAAGGTAAAGGGAAC","GCCCTCCAGTTGTTTCTCAT",2.9151828,2.4233746226350954,null,3.2760212,2.1424105332375403]
[9,"OsADH1","LOC_Os11g10480","GGAGGTATTGTGGAGAGTGTTG","TGAACACAGGGAGAACATGG",-1.0419011,-3.0195122012978137,null,2.3903496,2.2871735661008414]
[10,"OsSTA28","LOC_Os01g02080","CAGAGTAGCCAAGTTGATCGG","ATTAGGATCTTGGTGTATGGGC",4.180256,3.153181834632907,null,0,-0.36450561902890755]
[11,"OsCYP37","LOC_Os07g37830","TTGCTTGAAGAGAAGGGTGG","GGATAAACCTGGAGCCTGTAAC",1.9124368,2.4025527429895845,null,0,0.41026451104585443]
[12,"OsCYP26-2","LOC_Os01g50470","TTCTCTGCTCTTCAACCCAC","TGTGTATGGAGATGGTGTTGAG",2.221728,1.6129667749074172,null,0,0.1545790327070537]
[13,"Zn-finger FYVE","LOC_Os04g49430","GACATTCCAAAATCCCTTCCG","CCAATCTCCCACTGCTATAACTG",2.5869057,2.8032174827398593,null,0,-0.6623992666093504]
[14,"OsNYC3","LOC_Os06g24730","AGGTTTTGGAGTGGGAACG","GCTCTCCTGATGTGCTCTTAG",-1.1361288,-2.3610605737567782,null,-2.6283875,-0.818637317474922]
[15,"RCC","LOC_Os01g62810","GTTTCCTCTCCACATCCTATCC","CCTTCACGCAATTTCCCATG",-1.3124882,-1.9655538726046404,null,0,0.16311825717451348]
[16,"OsRPA1","LOC_Os03g11540","ACTACACCTGCAACACCATC","CCTTGGGACTCAACAGAATCG",-1.4651551,-1.412097399278842,null,0,0.32916710776444846]
[17,"OsRH16","LOC_Os03g51900","TCTCTGCTGAGGGGAAATCA","ATAGCACACGCAGCATTCAG",-1.0667939,-0.9392580757115299,null,-1.3841847,-2.107098006192112]
[18,"OsRH10","LOC_Os03g46610","CTTGTTCTTGTTGTGACGATGA","AAAATTGTGGCGGTGGTATG",-1.0285134,-0.5400336049468408,null,-1.2880772,-1.7385288260763336]
[19,"Class I CLP ATPase B-M","LOC_Os02g08490","CTCGGCTTTGACCCTAACTAC","GATCTCGTTCTCTACCATCTGC",-2.0256364,-1.2974366202185643,null,0,-0.0475416788331528]
[20,"OsGPDH1-1","LOC_Os05g41590","TTCTGCCTCAACATGGTCG","CTTCCAATACCTCCCGATCTC",-1.779047,-0.5590449679497391,null,-2.2842624,-0.5590449679497391]
[21,"Oslhca3","LOC_Os02g10390","CCAAGCAAGGTGCTGACA","GTTGAACACCTCGCCGTA",3.8901205,2.91456452349394,null,4.6723037,1.1080597458574533]
[22,"OsFBP1","LOC_Os01g64660","CGTGGGAAGTATTGCGTGT","ACATGCAGTATCCAGCAGCA",2.356459,2.1356807881431172,null,-3.1494305,-1.1168136649827498]
[23,"OsCDPK23","LOC_Os10g39420","GCCGTGAAATCCAGATAATGC","TGACCTCGCTTCTGAATCTTG",3.3820488,1.5072043356308522,null,4.3911285,1.0137188749118635]
[24,"Catomer γ subunit","LOC_Os03g12590","TGTGAGGGCACTGAGGTTGTA","CTGGCAACAATCTCGTGGAT",-1.2748643,-5.421463768438278,null,-1.6218687,-0.5994620704162714]
[25,"α-amylase 3D","LOC_Os08g36910","TTCGACTGGAACCTGAAGC","CTTCACCATGACCTTCTCGTC",3.305474,2.0442230065509834,null,3.8398027,1.4565795515227342]
[26,"OSCAT-A","LOC_Os02g02400","CCCAGTGTGATGAGTCGTTG","TTCTGTAGCCTTGCTGATGATC",2.5351803,2.3276873641760476,null,0,0.800008273255543]
[27,"Actin","LOC_Os01g64630 ","GACCCAGATCATGTTCGAGAC","TTACACCATCACCAGAGTCAAG"]
[28,"Actin","LOC_Os03g50885","TGTGTTGGACTCTGGTGATG","TGAATGAGTAACCACGCTCC","Correlation ",{"$f":"CORREL(F4:F28,G4:G28)","v":0.8657260576773147},null,"Correlation ",{"$f":"CORREL(I4:I28,J4:J28)","v":0.834805597148993}]

{"sheet":"Table S11 NUE-Related genes","index":10,"n_rows":6690,"n_cols":11,"rows_kept":6690,"merged":[[0,0,0,1],[0,2,0,3]]}
["WT",null,"RGA1",{"$nulls":5},"NAME","WT","RGA1"]
["DEGs (RAP-ID)","GeOmean_FOld_WT_T(Average)","RAP-ID","Geomean_Fold_MT_T","NUE-Related genes from Neeraja et al., 2021(https://doi.org/10.1007/s40502-021-00632-x) ; Supriya et al., 2021(https://www.frontiersin.org/articles/10.3389/fpls.2021.627955/full);  Sandhu et al., 2021 (https://www.frontiersin.org/articles/10.3389/fgene.2021.807210/full)","86 common elements in \"RGA1-Nitrate\" and \"NUE-Related gene\":","140 common elements in \"RGA1-Nitrate\", \"NUE-Related gene\" and \"WT-Nitrate\":","337 common elements in \"NUE-Related gene\" and \"WT-Nitrate\":","Os12g0194900",0,-2.0046668]
["Os11g0645400",12.038795,"Os03g0228200",-4.467912,"Os01g0104600","Os12g0194900","Os01g0224700","Os03g0135300","Os02g0134300",0,-1.9522705]
["Os05g0190500",10.144649,"Os03g0785900",-4.12553,"Os01g0111500","Os02g0134300","Os10g0573900","Os04g0401700","Os03g0218400",0,-1.771308]
["Os09g0483100",9.84637,"Os05g0527000",-3.971136,"Os01g0116600","Os03g0218400","Os05g0555600","Os05g0140100","Os04g0668900",0,-1.6065053]
["Os01g0878900",9.735756,"Os03g0724500",-3.4332333,"Os01g0118300","Os04g0668900","Os06g0133000","Os05g0150500","Os04g0490500",0,-1.5664234]
["Os01g0868900",9.720016,"Os02g0217900",-3.372493,"Os01g0120300","Os04g0490500","Os10g0580400","Os05g0155200","Os01g0862600",0,-1.4497062]
["Os04g0644400",9.671291,"Os05g0196100",-3.3338306,"Os01g0136900","Os01g0862600","Os03g0764900","Os05g0198400","Os03g0820400",0,-1.4386396]
["Os09g0483500",9.076649,"Os11g0668300",-3.3038952,"Os01g0249200","Os03g0820400","Os11g0490900","Os05g0203800","Os04g0665600",0,-1.3667952]
["Os02g0308800",9.052826,"Os11g0625900",-3.2918835,"Os02g0179000","Os04g0665600","Os07g0186000","Os05g0316100","Os12g0101800",0,-1.3193709]
["Os08g0459400",8.579358,"Os02g0601500",-3.1112576,"Os02g0179200","Os12g0101800","Os06g0115300","Os05g0316800","Os10g0419400",0,-1.2983583]
["Os11g0241700",8.5280695,"osa-miR439d",-3.0436947,"Os02g0202000","Os10g0419400","Os07g0613300","Os05g0333500","Os08g0189900",0,-1.2424258]
["Os06g0639800",8.474277,"Os01g0540800",-3.0436947,"Os02g0202200","Os08g0189900","Os01g0952800","Os05g0335800","Os07g0262200",0,-1.1710991]
["Os05g0456300",8.402199,"Os02g0574100",-3.042162,"Os02g0207900","Os07g0262200","Os10g0562100","Os06g0274000","Os08g0504700",0,-1.1219383]
["Os11g0701000",8.388633,"Os01g0224700",-3.0126324,"Os03g0120100","Os08g0504700","Os07g0604700","Os06g0677000","Os03g0301200",0,-1.1215805]
["Os02g0538700",8.359303,"Os04g0516800",-2.9926445,"Os03g0123500","Os03g0301200","Os03g0146400","Os06g0687400","Os07g0603800",0,-1.1091557]
["Os06g0142200",8.33086,"osa-miR439b",-2.965744,"Os03g0132000","Os07g0603800","Os09g0133600","Os07g0527000","Os04g0620700",0,-1.1026945]
["Os05g0469600",8.226357,"Os10g0527800",-2.9627552,"Os03g0135100","Os04g0620700","Os01g0869200","Os07g0603700","Os04g0509600",0,-1.0550585]
["Os02g0814200",8.182705,"Os11g0626700",-2.956356,"Os03g0135300","Os04g0509600","Os04g0600200","Os07g0605200","Os07g0690900",0,-1.0373789]
["Os03g0806800",8.163371,"Os03g0188100",-2.8997297,"Os03g0139600","Os07g0690900","Os04g0573900","Os08g0151300","Os03g0237100",0,-1.0076208]
["Os05g0515600",8.009467,"Os04g0447700",-2.855882,"Os03g0149200","Os03g0237100","Os01g0114300","Os08g0155400","Os01g0165000",0,-0.9488856]
["Os10g0204400",7.923153,"Os01g0176000",-2.8266761,"Os03g0138700","Os01g0165000","Os04g0556500","Os09g0279500","Os03g0170900",0,0.96311694]
["Os09g0248900",7.9145284,"Os02g0774200",-2.8069408,"Os03g0161800","Os03g0170900","Os03g0643300","Os09g0286600","Os12g0210200",0,1.0485562]
["Os05g0135500",7.861364,"Os09g0491772",-2.79547,"Os03g0172000","Os12g0210200","Os04g0652400","Os09g0365900","Os01g0227100",0,1.207028]
["Os09g0246300",7.772692,"Os10g0344500",-2.7708168,"Os03g0176100","Os01g0227100","Os03g0172000","Os10g0183000","Os08g0167000",0,1.2633623]
["Os06g0643500",7.729252,"Os07g0112700",-2.7452755,"Os03g0179900","Os08g0167000","Os07g0673900","Os10g0403000","Os01g0930800",0,1.3126802]
["Os10g0437500",7.707684,"Os10g0573900",-2.732528,"Os03g0188200","Os01g0930800","Os06g0667100","Os01g0102300","Os01g0206700",0,1.3550063]
["Os05g0189900",7.6789317,"Os03g0580200",-2.73143,"Os03g0191700","Os01g0206700","Os07g0694700","Os01g0102900","Os01g0120300",0,1.3658978]
["Os02g0781400",7.6499324,"Os03g0201000",-2.7257602,"Os03g0346700","Os01g0120300","Os09g0533600","Os01g0103100","Os05g0405000",0,1.3920685]
["Os04g0554800",7.6038456,"Os12g0172400",-2.7002013,"Os04g0320200","Os05g0405000","Os01g0582600","Os01g0109300","Os03g0235900",0,1.3953772]
["Os06g0653000",7.6015506,"Os02g0166200",-2.697586,"Os04g0350700","Os03g0235900","Os03g0296800","Os01g0114100","Os07g0525100",0,1.456244]
["Os03g0293600",7.5651565,"Os01g0949700",-2.6883936,"Os04g0379600","Os07g0525100","Os02g0532500","Os01g0125800","Os03g0667500",0,1.4625627]
["Os03g0439500",7.52218,"Os03g0673400",-2.6869125,"Os04g0401000","Os03g0667500","Os01g0547600","Os01g0142300","Os06g0712700",0,1.468964]
["Os11g0448700",7.508835,"osa-miR169f",-2.659211,"Os04g0401700","Os06g0712700","Os06g0354700","Os01g0147900","Os01g0851000",0,1.4919344]
["Os04g0629700",7.438141,"Os01g0944900",-2.6030276,"Os04g0432000","Os01g0851000","Os02g0117400","Os01g0178500","Os03g0232600",0,1.5340596]
["Os01g0106300",7.4042296,"Os09g0400400",-2.5996892,"Os05g0140100","Os03g0232600","Os01g0142800","Os01g0179400","Os03g0786400",0,1.5608987]
["Os10g0450000",7.397053,"Os11g0470500",-2.5822263,"Os05g0140800","Os03g0786400","Os06g0275000","Os01g0202700","Os08g0541400",0,1.6163689]
["Os08g0380100",7.3613625,"Os10g0515100",-2.5606892,"Os05g0145000","Os08g0541400","Os11g0210300","Os01g0209200","Os05g0211100",0,1.6188742]
["Os06g0118700",7.3395557,"Os05g0555600",-2.5385206,"Os05g0150500","Os05g0211100","Os03g0669000","Os01g0223600","Os03g0841800",0,1.6212746]
["Os06g0218600",7.3317027,"Os04g0103601",-2.5284827,"Os05g0154700","Os03g0841800","Os04g0436100","Os01g0265000","Os10g0554200",0,1.6377968]
["Os09g0459900",7.307221,"Os06g0697200",-2.5212672,"Os05g0155200","Os10g0554200","Os03g0826600","Os01g0273800","Os03g0782500",0,1.688983]
["Os12g0573600",7.284209,"osa-miR439g",-2.5014517,"Os05g0156900","Os03g0782500","Os08g0562200","Os01g0286900","Os05g0204600",0,1.7392745]
["Os03g0675600",7.2754326,"Os02g0668100",-2.4695454,"Os05g0158500","Os05g0204600","Os01g0195000","Os01g0323100","Os02g0731700",0,1.7829956]
["Os10g0552600",7.2442303,"Os04g0648200",-2.462386,"Os05g0160300","Os02g0731700","Os09g0380200","Os01g0348900","Os07g0568700",0,1.8588246]
["Os01g0716200",7.2312036,"Os04g0127500",-2.4608722,"Os05g0169300","Os07g0568700","Os01g0883800","Os01g0385400","Os02g0152900",0,1.8932557]
["Os02g0299200",7.222168,"Os02g0704000",-2.4485574,"Os05g0176800","Os02g0152900","Os03g0123300","Os01g0388000","Os11g0106700",0,1.9319158]
["Os11g0499600",7.2071304,"Os07g0613600",-2.4041827,"Os05g0181200","Os11g0106700","Os01g0670800","Os01g0495900","Os12g0277500",0,2.0210934]
["Os04g0408600",7.2028546,"Os07g0489200",-2.356139,"Os05g0183100","Os12g0277500","Os01g0633100","Os01g0557500","Os07g0558500",0,2.1247575]
["Os10g0467800",7.1616282,"Os01g0949750",-2.3416748,"Os05g0187500","Os07g0558500","Os01g0915600","Os01g0559500","Os10g0567400",0,2.1365983]
["Os04g0552300",7.1036925,"Os06g0522300",-2.3303158,"Os05g0195200","Os10g0567400","Os04g0550500","Os01g0566100","Os06g0107700",0,2.1411397]
["Os04g0337500",7.0970664,"Os07g0663000",-2.297181,"Os05g0196200","Os06g0107700","Os04g0611800","Os01g0646300","Os03g0337600",0,2.157176]
["Os06g0141600",7.0655046,"Os02g0606600",-2.2836583,"Os05g0198400","Os03g0337600","Os05g0129000","Os01g0648000","Os09g0451000",0,2.1812222]
["Os11g0644700",6.9840145,"Os03g0574900",-2.2830698,"Os05g0203800","Os09g0451000","Os05g0438600","Os01g0678500","Os01g0878700",0,2.1816192]
["Os09g0248100",6.9785237,"Os08g0355400",-2.2830312,"Os05g0213500","Os01g0878700","Os06g0662200","Os01g0682001","Os01g0680200",0,2.1909852]
["Os06g0589500",6.838103,"Os08g0529100",-2.2647016,"Os05g0216950","Os01g0680200","Os10g0370500","Os01g0686800","Os11g0167800",0,2.2365227]
["Os11g0141900",6.828964,"Os06g0133000",-2.2645013,"Os05g0222200","Os11g0167800","Os11g0609600","Os01g0703600","Os03g0711100",0,2.263133]
["Os03g0365800",6.747145,"Os12g0198200",-2.2590168,"Os05g0230700","Os03g0711100","Os02g0154200","Os01g0707500","Os09g0532400",0,2.290649]
["Os01g0946600",6.706499,"Os11g0210500",-2.2529678,"Os05g0247100","Os09g0532400","Os05g0567300","Os01g0710200","Os01g0292700",0,2.2945359]
["Os01g0388000",6.700653,"Os02g0594232",-2.242687,"Os05g0276100","Os01g0292700","Os09g0442100","Os01g0718300","Os03g0778100",0,2.3129609]
["Os10g0109200",6.663895,"Os02g0526400",-2.2417166,"Os05g0277500","Os03g0778100","Os10g0564500","Os01g0719100","Os03g0130900",0,2.371442]
["Os08g0128000",6.663168,"Os12g0153200",-2.2406476,"Os05g0302300","Os03g0130900","Os07g0630800","Os01g0726400","Os10g0496900",0,2.4886959]
["Os03g0162800",6.6523795,"Os10g0580400",-2.238878,"Os05g0303000","Os10g0496900","Os06g0572400","Os01g0757200","Os01g0848200",0,2.543742]
["Os10g0127900",6.643799,"Os09g0489500",-2.236131,"Os05g0316100","Os01g0848200","Os03g0712800","Os01g0765000","Os07g0686800",0,2.5641897]
["Os04g0602500",6.577109,"Os12g0129700",-2.2358558,"Os05g0316800","Os07g0686800","Os08g0115200","Os01g0769700","Os02g0831500",0,2.583096]
["Os06g0142350",6.547705,"Os01g0882400",-2.2290983,"Os05g0317900","Os02g0831500","Os02g0762600","Os01g0775400","Os08g0546300",0,2.626156]
["Os05g0387300",6.5283504,"Os08g0378000",-2.227124,"Os05g0322900","Os08g0546300","Os09g0422500","Os01g0808100","Os06g0693200",0,2.631947]
["Os03g0269300",6.5129943,"Os03g0725200",-2.226667,"Os05g0324600","Os06g0693200","Os05g0196200","Os01g0834400","Os06g0264200",0,2.6492913]
["Os04g0678700",6.5093646,"Os02g0193200",-2.2218125,"Os05g0328333","Os06g0264200","Os02g0573200","Os01g0848400","Os06g0608700",0,2.6601543]
["Os07g0204400",6.5019193,"Os12g0431100",-2.2190163,"Os05g0333200","Os06g0608700","Os04g0166600","Os01g0889400","Os07g0544800",0,2.661773]
["Os12g0138500",6.4889946,"Os09g0343200",-2.1994035,"Os05g0333500","Os07g0544800","Os05g0455200","Os01g0898300","Os05g0139100",0,2.685197]
["Os11g0460800",6.4827347,"Os01g0950700",-2.1979692,"Os05g0219900","Os05g0139100","Os05g0230700","Os01g0908600","Os01g0229400",0,2.7913215]
["Os04g0630300",6.4725347,"Os07g0507500",-2.1964633,"Os05g0269200","Os01g0229400","Os09g0441900","Os01g0909100","Os03g0175800",0,2.9263191]
["Os03g0182900",6.4664645,"Os04g0608600",-2.194215,"Os05g0335800","Os03g0175800","Os03g0685000","Os01g0917500","Os05g0247100",0,2.9267607]
["Os02g0767300",6.4490943,"Os07g0619200",-2.1924903,"Os06g0110200","Os05g0247100","Os03g0856700","Os01g0919400","Os09g0537700",0,3.1804707]
["Os06g0141700",6.441534,"Os08g0203350",-2.1896985,"Os06g0126250","Os09g0537700","Os08g0532200","Os01g0922800","Os05g0454200",0,3.3420017]
["Os07g0106700",6.42135,"Os09g0468300",-2.1886747,"Os06g0129400","Os05g0454200","Os08g0536300","Os01g0927600","Os09g0346500",0,3.3939323]
["Os01g0795400",6.3875213,"Os01g0824800",-2.187896,"Os06g0162800","Os09g0346500","Os04g0442300","Os01g0949400","Os03g0135100",0,3.5501435]
["Os01g0226200",6.3769183,"Os04g0288500",-2.1872857,"Os06g0274000","Os03g0135100","Os01g0367100","Os01g0968800","Os01g0839200",0,3.7316983]
["Os11g0302800",6.3742046,"Os04g0488100",-2.1838171,"Os06g0275500","Os01g0839200","Os05g0481000","Os01g0976800","Os01g0511600",0,3.882858]
["Os01g0750300",6.3130035,"Os11g0118400",-2.1817238,"Os06g0286375","Os01g0511600","Os05g0389000","Os02g0106100","Os11g0115400",0,3.8844478]
["Os11g0592600",6.300508,"Os07g0158400",-2.1801736,"Os06g0664800","Os11g0115400","Os06g0703500","Os02g0116600","Os08g0104600",0,3.9559326]
["Os11g0189600",6.2954717,"Os02g0190300",-2.1796088,"Os06g0665400","Os08g0104600","Os08g0237000","Os02g0120500","Os02g0744900",0,4.0255523]
["Os11g0490600",6.2186036,"Os03g0582300",-2.1764817,"Os06g0667900","Os02g0744900","Os05g0349700","Os02g0140300","Os04g0659100",0,4.2717166]
["Os08g0473600",6.2063766,"Os01g0919800",-2.1748767,"Os06g0669400","Os04g0659100","Os04g0685900","Os02g0141300","Os08g0435900",0,4.3340163]
["Os03g0187350",6.178833,"Os03g0194600",-2.172973,"Os06g0671150","Os08g0435900","Os04g0645100","Os02g0143200","Os12g0274700",0,4.865291]
["Os10g0407200",6.170794,"Os07g0258400",-2.169833,"Os06g0675600","Os12g0274700","Os04g0640600","Os02g0171100","Os11g0267000",0,4.978439]
["Os08g0178500",6.1633835,"Os03g0764900",-2.1698039,"Os06g0677000","Os11g0267000","Os05g0554000","Os02g0187800","Os04g0401000",0,5.193791]
["Os01g0313600",6.1607804,"Os04g0370900",-2.1680458,"Os06g0687400","Os04g0401000","Os03g0735000","Os02g0218600","Os01g0224700",-4.1785526,-3.0126324]
["Os11g0179000",6.0542827,"Os11g0702900",-2.153173,"Os07g0169500",null,"Os01g0749200","Os02g0274100","Os10g0573900",-2.1658926,-2.732528]
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["Os03g0234100",4.857046,"Os05g0495700",-1.696875,"Os01g0633100",null,null,"Os06g0614000","Os04g0401700",-3.1895149,0]
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["Os02g0646500",4.8398767,"Os04g0598600",-1.6867648,"Os01g0646300",null,null,"Os06g0653000","Os05g0155200",-1.4368228,0]
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["Os06g0317200",4.472512,"Os03g0157900",-1.5750166,"Os01g0917500",null,null,"Os09g0560900","Os01g0898300",-1.1400275,0]
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["Os03g0103000",4.460877,"Os04g0540500",-1.5697442,"Os01g0930800",null,null,"Os10g0117000","Os01g0922800",-1.0300881,0]
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["Os08g0502600",4.427164,"Os04g0308000",-1.5558076,"Os01g0976800",null,null,"Os11g0107000","Os02g0143200",1.7122394,0]
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["Os11g0559200",4.4121723,"Os01g0869200",-1.547753,"Os02g0106100",null,null,"Os11g0148500","Os02g0218600",1.9261684,0]
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["Os10g0539600",4.3911285,"Os04g0476400",-1.5369649,"Os02g0126400",null,null,"Os11g0556400","Os02g0570400",-1.6144248,0]
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["Os10g0133500",4.369273,"Os11g0543100",-1.5350777,"Os02g0141300",null,null,"Os12g0122000","Os02g0648100",1.9717122,0]
["Os04g0676400",4.3668,"Os02g0706500",-1.5348808,"Os02g0143200",null,null,"Os12g0465700","Os02g0656600",1.982606,0]
["Os04g0233400",4.3566394,"Os12g0527700",-1.533811,"Os02g0152900",null,null,"Os12g0502300","Os02g0700700",6.0517774,0]
["Os03g0259001",4.353885,"Os04g0464966",-1.5327772,"Os02g0154000",null,null,"Os12g0555500","Os02g0730000",3.0123825,0]
["Os07g0194500",4.3532352,"Os01g0222900",-1.5310451,"Os02g0154100",null,null,"Os12g0601400","Os02g0743400",2.1346276,0]
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