4_1_Oct_SF_Bin32_scaffold_7496_c1_2-2440_1

Created: March 29, 2023, 8:38 p.m. at 20:38

Models Name Description GMQE QSQE Seq Id Coverage Range Method Resolution Oligo-state Ligands Found by Seq Similarity
✓
 7b04.1.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.72 0.00 40.77 0.95 1-811 X-ray 2.97 monomer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA BLAST 0.41
7b04.2.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.70 0.00 40.77 0.95 1-811 X-ray 2.97 monomer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA BLAST 0.41
7b04.1.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.71 0.00 38.92 0.96 1-812 X-ray 2.97 monomer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.40
7b04.2.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.68 0.00 38.92 0.96 1-812 X-ray 2.97 monomer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.40
5e7o.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
 0.49 0.00 26.73 0.78 1-812 X-ray 2.40 monomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.34
4ydd.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB from Azospira suillum PS
 0.48 0.00 26.30 0.78 1-812 X-ray 1.86 monomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.34
2ivf.1.A
ETHYLBENZENE DEHYDROGENASE ALPHA-SUBUNIT
ETHYLBENZENE DEHYDROGENASE FROM AROMATOLEUM AROMATICUM
 0.48 0.00 25.39 0.80 1-812 X-ray 1.88 monomer 1 x MES, 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S, 1 x HEM HHblits 0.32
4ydd.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB from Azospira suillum PS
 0.39 0.00 30.81 0.68 91-696 X-ray 1.86 monomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S BLAST 0.36
5e7o.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
 0.39 0.00 30.81 0.68 91-696 X-ray 2.40 monomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S BLAST 0.36
6cz7.1.A
ArrA
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3
 0.35 17.05 0.74 1-812 X-ray 1.62 hetero-1-1-mer 5 x SF4, 2 x MGD, 1 x MO, 1 x PG5 HHblits 0.28
5nqd.1.A
AroA
Arsenite oxidase AioAB from Rhizobium sp. str. NT-26 mutant AioBF108A
 0.31 16.37 0.70 1-812 X-ray 2.20 hetero-2-2-mer 4 x MGD, 2 x O, 2 x 4MO, 2 x F3S, 2 x FES HHblits 0.28
4aay.1.A
AROA
Crystal Structure of the arsenite oxidase protein complex from Rhizobium species strain NT-26
 0.31 16.02 0.70 1-812 X-ray 2.70 hetero-oligomer 4 x MGD, 2 x O, 2 x 4MO, 2 x F3S, 2 x FES HHblits 0.28
7qv7.1.L
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.36 18.58 0.68 1-812 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.30
7qv7.1.O
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.35 18.58 0.68 1-812 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.30
2e7z.1.A
Acetylene hydratase Ahy
Acetylene Hydratase from Pelobacter acetylenicus
 0.36 20.48 0.67 1-812 X-ray 1.26 monomer 1 x SF4, 2 x MGD, 1 x W HHblits 0.29
1aa6.1.A
FORMATE DEHYDROGENASE H
REDUCED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
 0.39 0.00 19.92 0.66 1-812 X-ray 2.30 monomer 1 x SF4, 2 x MGD, 1 x 4MO HHblits 0.31
1fdo.1.A
FORMATE DEHYDROGENASE H
OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
 0.39 0.00 19.92 0.66 1-812 X-ray 2.80 monomer 1 x SF4, 2 x MGD, 1 x 6MO HHblits 0.31
2iv2.1.A
Formate dehydrogenase H
Reinterpretation of reduced form of formate dehydrogenase H from E. coli
 0.39 0.00 19.92 0.66 1-812 X-ray 2.27 monomer 1 x SF4, 1 x 2MD, 1 x MGD HHblits 0.31
7z0t.1.G
Formate dehydrogenase H
Structure of the Escherichia coli formate hydrogenlyase complex (aerobic preparation, composite structure)
 0.39 0.00 19.92 0.66 1-812 EM 0.00 monomer 1 x NI, 1 x FCO, 8 x SF4, 1 x FE, 2 x MGD, 1 x 6MO HHblits 0.31
1g8k.1.A
ARSENITE OXIDASE
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
 0.31 17.42 0.68 1-812 X-ray 1.64 hetero-1-1-mer 3 x HG, 2 x CA, 2 x MGD, 1 x O, 1 x 4MO, 1 x F3S, 1 x FES HHblits 0.28
2vpz.1.A
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE NATIVE STRUCTURE
 0.36 19.74 0.66 1-812 X-ray 2.40 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO HHblits 0.29
2vpx.1.D
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE WITH BOUND QUINONE (UQ1)
 0.36 19.74 0.66 1-812 X-ray 3.10 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO, 2 x UQ1 HHblits 0.29
7bkb.1.F
Formate dehydrogenase
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)
 0.35 0.00 21.71 0.65 1-812 EM 0.00 monomer 48 x SF4, 4 x FAD, 2 x FES, 4 x 9S8, 4 x ZN, 2 x MO, 4 x MGD HHblits 0.31
3ir7.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-R94S
 0.36 0.00 23.52 0.62 1-588 X-ray 2.50 monomer 2 x MD1, 4 x SF4, 1 x 6MO, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.32
1q16.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli
 0.35 0.00 23.52 0.62 1-588 X-ray 1.90 monomer 2 x MD1, 1 x 6MO, 2 x HEM, 4 x SF4, 1 x F3S, 1 x AGA, 1 x 3PH HHblits 0.32
1r27.4.A
Respiratory nitrate reductase 1 alpha chain
Crystal Structure of NarGH complex
 0.36 0.00 23.52 0.62 1-588 X-ray 2.00 monomer 4 x MO, 16 x SF4, 8 x MGD, 4 x F3S HHblits 0.32
✓
 3ir5.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49C
 0.36 0.00 23.32 0.62 1-588 X-ray 2.30 monomer 2 x MD1, 1 x 6MO, 4 x SF4, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.32
3egw.1.A
Respiratory nitrate reductase 1 alpha chain
The crystal structure of the NarGHI mutant NarH - C16A
 0.35 0.00 23.32 0.62 1-588 X-ray 1.90 monomer 2 x MD1, 2 x MGD, 2 x 6MO, 6 x SF4, 4 x F3S, 2 x 3PH, 4 x HEM, 2 x AGA HHblits 0.32
3ir6.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49S
 0.34 0.00 23.32 0.62 1-588 X-ray 2.80 monomer 2 x GDP, 1 x AGA, 3 x SF4, 1 x F3S, 2 x HEM HHblits 0.32
1eu1.1.A
DIMETHYL SULFOXIDE REDUCTASE
THE CRYSTAL STRUCTURE OF RHODOBACTER SPHAEROIDES DIMETHYLSULFOXIDE REDUCTASE REVEALS TWO DISTINCT MOLYBDENUM COORDINATION ENVIRONMENTS.
 0.34 20.62 0.63 120-769 X-ray 1.30 monomer 3 x GLC, 1 x CD, 2 x MGD, 1 x 6MO, 2 x O HHblits 0.30
1dms.1.A
DMSO REDUCTASE
STRUCTURE OF DMSO REDUCTASE
 0.33 20.12 0.63 123-770 X-ray 1.88 monomer 2 x PGD, 1 x 2MO HHblits 0.30
4v4c.1.A
Pyrogallol hydroxytransferase large subunit
Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici
 0.30 17.23 0.62 123-812 X-ray 2.35 hetero-oligomer 2 x CA, 2 x MGD, 1 x 4MO, 3 x SF4 HHblits 0.28
7l5i.1.A
Trimethylamine-N-oxide reductase
Crystal Structure of Haemophilus influenzae MtsZ at pH 7.0
 0.33 19.92 0.60 124-812 X-ray 1.73 monomer 2 x MGD, 1 x MO, 1 x O HHblits 0.30
7l5s.1.A
Trimethylamine-N-oxide reductase
Crystal Structure of Haemophilus influenzae MtsZ at pH 5.5
 0.33 19.92 0.60 124-812 X-ray 2.09 monomer 1 x O, 2 x MGD, 1 x MO HHblits 0.30
1e60.1.A
Dimethyl sulfoxide/trimethylamine N-oxide reductase
OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - Structure II BUFFER
 0.33 0.00 20.65 0.60 122-812 X-ray 2.00 monomer 2 x PGD, 1 x 2MO HHblits 0.30
4dmr.1.A
DMSO REDUCTASE
REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS WITH BOUND DMSO SUBSTRATE
 0.33 0.00 20.78 0.60 122-812 X-ray 1.90 monomer 2 x PGD, 1 x 4MO, 1 x O HHblits 0.30
1e18.1.A
DMSO REDUCTASE.
TUNGSTEN-SUSBSTITUTED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS
 0.33 0.00 20.78 0.60 122-812 X-ray 2.00 monomer 2 x PGD, 1 x 6WO HHblits 0.30
1e5v.2.A
Dimethyl sulfoxide/trimethylamine N-oxide reductase
OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES BUFFER
 0.33 0.00 20.82 0.60 123-812 X-ray 2.40 monomer 2 x PGD, 1 x 2MO HHblits 0.30
1kqf.1.A
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT
FORMATE DEHYDROGENASE N FROM E. COLI
 0.33 19.34 0.60 1-588 X-ray 1.60 hetero-oligomer 3 x 6MO, 15 x SF4, 6 x MGD, 6 x HEM, 3 x CDL HHblits 0.29
1tmo.1.A
TRIMETHYLAMINE N-OXIDE REDUCTASE
TRIMETHYLAMINE N-OXIDE REDUCTASE FROM SHEWANELLA MASSILIA
 0.31 17.90 0.60 122-812 X-ray 2.50 monomer 2 x 2MD, 1 x 2MO HHblits 0.29
8bqg.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min
 0.32 18.43 0.59 1-588 X-ray 1.95 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.29
6sdr.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
 0.31 18.63 0.59 1-588 X-ray 2.10 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.29
6sdv.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing,Formate dehydrogenase, alpha subunit, selenocysteine-containing,W-formate dehydrogenase - alpha subunit
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
 0.31 18.26 0.59 1-588 X-ray 1.90 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x W, 1 x H2S HHblits 0.29
7e5z.1.A
Formate dehydrogenase
Dehydrogenase holoenzyme
 0.30 19.20 0.58 1-673 EM 0.00 hetero-1-1-mer 1 x W, 2 x MGD, 2 x FES, 4 x SF4, 1 x FMN HHblits 0.30
7vw6.1.A
Formate dehydrogenase
Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1
 0.34 19.20 0.58 1-673 EM 0.00 hetero-1-1-mer 4 x SF4, 2 x FES, 2 x MGD, 1 x W, 1 x FMN HHblits 0.30
1h0h.1.A
FORMATE DEHYDROGENASE SUBUNIT ALPHA
Tungsten containing Formate Dehydrogenase from Desulfovibrio Gigas
 0.32 17.01 0.59 1-588 X-ray 1.80 hetero-1-1-mer 1 x W, 1 x 2MD, 1 x MGD, 4 x SF4, 1 x CA HHblits 0.28
6lod.1.B
Fe-S-cluster-containing hydrogenase components 1-like protein
Cryo-EM structure of the air-oxidized photosynthetic alternative complex III from Roseiflexus castenholzii
 0.28 12.19 0.60 1-770 EM 0.00 hetero-1-1-1-1-1-1-… 6 x HEC, 2 x EL6, 3 x SF4, 1 x F3S HHblits 0.26
1ogy.1.A
PERIPLASMIC NITRATE REDUCTASE
Crystal structure of the heterodimeric nitrate reductase from Rhodobacter sphaeroides
 0.30 19.56 0.55 1-589 X-ray 3.20 hetero-1-1-mer 1 x SF4, 1 x MO, 2 x MGD, 2 x HEC HHblits 0.28
6tg9.1.A
Formate dehydrogenase subunit alpha
Cryo-EM Structure of NADH reduced form of NAD+-dependent Formate Dehydrogenase from Rhodobacter capsulatus
 0.32 20.41 0.54 1-632 EM 3.24 hetero-2-2-2-2-mer 4 x MGD, 2 x 6MO, 4 x FES, 10 x SF4, 2 x H2S, 2 x FMN, 2 x NAI HHblits 0.30
8e9g.1.G
NADH-quinone oxidoreductase subunit G
Mycobacterial respiratory complex I with both quinone positions modelled
 0.24 15.95 0.57 1-769 EM 0.00 hetero-1-1-1-1-1-1-… HHblits 0.26
3o5a.1.A
Periplasmic nitrate reductase
Crystal Structure of partially reduced Periplasmic Nitrate Reductase from Cupriavidus necator using Ionic Liquids
 0.30 17.78 0.55 1-589 X-ray 1.72 hetero-oligomer 1 x SF4, 1 x MOS, 2 x MGD, 2 x HEC HHblits 0.28
2nya.1.A
Periplasmic nitrate reductase
Crystal structure of the periplasmic nitrate reductase (NAP) from Escherichia coli
 0.30 15.85 0.55 1-589 X-ray 2.50 monomer 1 x SF4, 1 x 6MO, 2 x MGD HHblits 0.28
2v45.1.A
PERIPLASMIC NITRATE REDUCTASE
A NEW CATALYTIC MECHANISM OF PERIPLASMIC NITRATE REDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 FROM CRYSTALLOGRAPHIC AND EPR DATA AND BASED ON DETAILED ANALYSIS OF THE SIXTH LIGAND
 0.29 19.71 0.52 1-589 X-ray 2.40 monomer 1 x SF4, 1 x MO, 2 x MGD, 1 x LCP HHblits 0.29
2v3v.1.A
PERIPLASMIC NITRATE REDUCTASE
A NEW CATALYTIC MECHANISM OF PERIPLASMIC NITRATE REDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 FROM CRYSTALLOGRAPHIC AND EPR DATA AND BASED ON DETAILED ANALYSIS OF THE SIXTH LIGAND
 0.30 19.24 0.52 1-589 X-ray 1.99 monomer 1 x SF4, 1 x MO, 2 x MGD, 4 x LCP HHblits 0.28
1g8j.1.A
ARSENITE OXIDASE
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
 0.26 16.75 0.50 1-588 X-ray 2.03 hetero-oligomer 2 x MGD, 1 x O, 1 x 4MO, 1 x F3S, 1 x FES HHblits 0.28
3ir5.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49C
 0.19 0.00 31.10 0.42 90-451 X-ray 2.30 monomer 2 x MD1, 1 x 6MO, 4 x SF4, 1 x AGA, 1 x F3S, 2 x HEM BLAST 0.36
1r27.4.A
Respiratory nitrate reductase 1 alpha chain
Crystal Structure of NarGH complex
 0.19 0.00 31.10 0.42 90-451 X-ray 2.00 monomer 4 x MO, 16 x SF4, 8 x MGD, 4 x F3S BLAST 0.36
✓
 3ir7.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-R94S
 0.19 0.00 31.10 0.42 90-451 X-ray 2.50 monomer 2 x MD1, 4 x SF4, 1 x 6MO, 1 x AGA, 1 x F3S, 2 x HEM BLAST 0.36
1q16.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli
 0.19 0.00 31.10 0.42 90-451 X-ray 1.90 monomer 2 x MD1, 1 x 6MO, 2 x HEM, 4 x SF4, 1 x F3S, 1 x AGA, 1 x 3PH BLAST 0.36
3ir6.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49S
 0.18 0.00 31.10 0.42 90-451 X-ray 2.80 monomer 2 x GDP, 1 x AGA, 3 x SF4, 1 x F3S, 2 x HEM BLAST 0.36
3egw.1.A
Respiratory nitrate reductase 1 alpha chain
The crystal structure of the NarGHI mutant NarH - C16A
 0.19 0.00 31.66 0.42 90-451 X-ray 1.90 monomer 2 x MD1, 2 x MGD, 2 x 6MO, 6 x SF4, 4 x F3S, 2 x 3PH, 4 x HEM, 2 x AGA BLAST 0.36
7t2r.1.A
NiFe hydrogenase subunit A
Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN-free apo state
 0.22 13.15 0.45 1-589 EM 0.00 hetero-2-2-2-2-2-mer 6 x FES, 12 x SF4, 2 x 3NI, 2 x FCO HHblits 0.26
7t30.1.A
NiFe hydrogenase subunit A
Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN/NAD(H) bound state
 0.21 13.15 0.45 1-589 EM 0.00 hetero-2-2-2-2-2-mer 4 x FES, 12 x SF4, 2 x NAD, 2 x FMN, 2 x 3NI, 2 x FCO HHblits 0.26
7p63.1.C
NADH-quinone oxidoreductase
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Closed state
 0.21 17.72 0.41 1-588 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x CA, 1 x DCQ, 4 x LFA, 8 x 3PE HHblits 0.27
7nz1.1.E
NADH-quinone oxidoreductase subunit G
Respiratory complex I from Escherichia coli - focused refinement of cytoplasmic arm
 0.22 17.72 0.41 1-588 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 2 x FES, 1 x FMN, 1 x CA HHblits 0.27
7p61.1.C
NADH-quinone oxidoreductase
Complex I from E. coli, DDM-purified, with NADH, Resting state
 0.21 17.72 0.41 1-588 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x CA, 2 x 3PE, 1 x UQ8 HHblits 0.27
7zm7.1.I
NADH-ubiquinone oxidoreductase-like protein
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (inhibited by DDM)
 0.19 16.08 0.38 1-589 EM 0.00 hetero-1-1-1-1-1-1-… 4 x PC1, 14 x LMT, 5 x CDL, 8 x 3PE, 2 x FES, 6 x SF4, 1 x FMN, 1 x NDP, 1 x ZN, 2 x ZMP HHblits 0.28
6zr2.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A
 0.19 0.00 11.46 0.39 1-589 EM 3.10 monomer 6 x SF4, 4 x PC1, 2 x FES, 1 x FMN, 9 x 3PE, 7 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.25
6g72.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Mouse mitochondrial complex I in the deactive state
 0.18 0.00 11.46 0.39 1-589 EM 0.00 monomer 6 x SF4, 2 x FES, 1 x FMN, 1 x ADP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.25
7ak6.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A
 0.18 0.00 11.46 0.39 1-589 EM 0.00 monomer 6 x SF4, 1 x PC1, 2 x FES, 1 x FMN, 4 x 3PE, 2 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.25
7ak5.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2 A
 0.18 0.00 11.46 0.39 1-589 EM 0.00 monomer 6 x SF4, 2 x PC1, 2 x FES, 1 x FMN, 8 x 3PE, 4 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.25
7bkb.1.L
Formylmethanofuran dehydrogenase, subunit B
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)
 0.16 16.49 0.35 113-589 EM 0.00 hetero-2-2-2-2-2-2-… 48 x SF4, 4 x FAD, 2 x FES, 4 x 9S8, 4 x ZN, 2 x MO, 4 x MGD HHblits 0.27
5t5i.1.B
Tungsten formylmethanofuran dehydrogenase subunit B
TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, ORTHORHOMBIC FORM AT 1.9 A
 0.17 16.25 0.35 120-588 X-ray 1.90 hetero-oligomer 4 x ZN, 2 x MG, 18 x K, 22 x SF4, 2 x W, 4 x MGD, 2 x H2S, 2 x CA HHblits 0.27
2ivf.1.A
ETHYLBENZENE DEHYDROGENASE ALPHA-SUBUNIT
ETHYLBENZENE DEHYDROGENASE FROM AROMATOLEUM AROMATICUM
 0.21 0.00 39.42 0.30 121-411 X-ray 1.88 monomer 1 x MES, 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S, 1 x HEM BLAST 0.39
6f0k.1.B
Fe-S-cluster-containing hydrogenase
Alternative complex III
 0.15 17.58 0.34 107-588 EM 0.00 hetero-1-1-1-1-1-1-… 6 x HEC, 1 x F3S, 3 x SF4 HHblits 0.27
6btm.1.B
Alternative Complex III subunit B
Structure of Alternative Complex III from Flavobacterium johnsoniae (Wild Type)
 0.16 9.70 0.33 107-587 EM 3.40 hetero-1-1-1-1-1-1-… 6 x HEC, 1 x F3S, 1 x SF4, 2 x E87 HHblits 0.26
7arc.1.F
75 kDa
Cryo-EM structure of Polytomella Complex-I (peripheral arm)
 0.15 15.35 0.30 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x 8Q1 HHblits 0.28
7dgr.10.A
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Activity optimized supercomplex state2
 0.14 12.65 0.30 119-589 EM 0.00 monomer HHblits 0.26
5o31.1.8
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Mitochondrial complex I in the deactive state
 0.14 12.65 0.30 119-589 EM 4.13 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NAP, 1 x ZN HHblits 0.26
7aqr.1.F
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm)
 0.14 13.39 0.29 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x 8Q1 HHblits 0.27
7a23.1.O
75kDa
Plant mitochondrial respiratory complex I
 0.14 13.39 0.29 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 2 x T7X, 3 x CDL, 1 x U10, 1 x PEV, 2 x FES, 1 x NDP, 2 x ZN HHblits 0.27
7ar8.1.G
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation)
 0.14 13.39 0.29 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x UQ9, 3 x PTY, 2 x PC7, 1 x PGT, 1 x FE, 1 x NDP, 2 x ZN, 2 x 8Q1, 1 x LMN, 1 x PSF, 1 x T7X HHblits 0.27
7ar7.1.G
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation)
 0.14 12.97 0.29 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x UQ9, 3 x PTY, 2 x PC7, 1 x LMN, 1 x NDP, 2 x ZN, 2 x 8Q1, 1 x PGT, 1 x PSF, 1 x T7X HHblits 0.27
6x89.1.H
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Vigna radiata mitochondrial complex I*
 0.14 13.39 0.29 119-589 EM 0.00 hetero-1-1-1-1-1-1-… 1 x NAP, 6 x PC1, 6 x SF4, 2 x FES, 2 x ZN, 1 x FMN HHblits 0.27
8e73.55.A
NDUS1
Vigna radiata supercomplex I+III2 (full bridge)
 0.15 13.39 0.29 119-589 EM 0.00 monomer HHblits 0.27
5xtb.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of human respiratory complex I matrix arm
 0.09 13.14 0.22 352-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x 8Q1, 1 x NDP, 2 x FES HHblits 0.27
7tgh.58.A
NADH-ubiquinone oxidoreductase 75 kDa subunit
Cryo-EM structure of respiratory super-complex CI+III2 from Tetrahymena thermophila
 0.10 16.28 0.21 350-589 EM 0.00 monomer HHblits 0.28
6zk9.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Peripheral domain of open complex I during turnover
 0.10 12.21 0.21 355-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x K, 2 x PC1, 2 x 3PE, 1 x ZN, 1 x NDP, 1 x ZMP, 1 x CDL HHblits 0.27
6yj4.1.G
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Structure of Yarrowia lipolytica complex I at 2.7 A
 0.09 16.17 0.21 354-589 EM 0.00 hetero-1-1-1-1-1-1-… 18 x 3PE, 6 x SF4, 5 x LMT, 8 x PLC, 2 x FES, 1 x FMN, 6 x CDL, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.29
6rfs.1.A
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Cryo-EM structure of a respiratory complex I mutant lacking NDUFS4
 0.09 16.17 0.21 354-589 EM 4.04 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x ZMP HHblits 0.29
6rfq.1.A
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2
 0.09 16.17 0.21 354-589 EM 3.30 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 10 x 3PE, 2 x LMN, 4 x CDL, 2 x ZMP, 4 x PLC, 3 x T7X, 1 x CPL HHblits 0.29
6gcs.1.A
75-KDA PROTEIN (NUAM)
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica
 0.09 16.17 0.21 354-589 EM 4.32 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x ZMP, 1 x CDL, 3 x 3PE HHblits 0.29
3ir5.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49C
 0.03 0.00 17.24 0.14 654-769 X-ray 2.30 monomer 2 x MD1, 1 x 6MO, 4 x SF4, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.27
3egw.1.A
Respiratory nitrate reductase 1 alpha chain
The crystal structure of the NarGHI mutant NarH - C16A
 0.03 0.00 17.24 0.14 654-769 X-ray 1.90 monomer 2 x MD1, 2 x MGD, 2 x 6MO, 6 x SF4, 4 x F3S, 2 x 3PH, 4 x HEM, 2 x AGA HHblits 0.27
✓
 1r27.4.A
Respiratory nitrate reductase 1 alpha chain
Crystal Structure of NarGH complex
 0.03 0.00 17.24 0.14 654-769 X-ray 2.00 monomer 4 x MO, 16 x SF4, 8 x MGD, 4 x F3S HHblits 0.27
1q16.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli
 0.03 0.00 17.39 0.14 654-768 X-ray 1.90 monomer 2 x MD1, 1 x 6MO, 2 x HEM, 4 x SF4, 1 x F3S, 1 x AGA, 1 x 3PH HHblits 0.27
3ir7.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-R94S
 0.03 0.00 17.39 0.14 654-768 X-ray 2.50 monomer 2 x MD1, 4 x SF4, 1 x 6MO, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.27
3ir6.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49S
 0.03 0.00 17.54 0.14 655-768 X-ray 2.80 monomer 2 x GDP, 1 x AGA, 3 x SF4, 1 x F3S, 2 x HEM HHblits 0.27
7zd6.1.4
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Complex I from Ovis aries, at pH7.4, Open state
 0.05 0.00 17.02 0.12 484-589 EM 0.00 monomer 6 x PC1, 14 x 3PE, 1 x DCQ, 2 x ZMP, 1 x AMP, 1 x MYR, 6 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x K, 1 x ZN, 1 x NDP HHblits 0.30
6qcf.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Ovine respiratory complex I FRC open class 6
 0.05 0.00 17.02 0.12 484-589 EM 0.00 monomer 6 x SF4, 1 x FMN, 2 x FES, 1 x ZN, 1 x NDP, 2 x ZMP HHblits 0.30
6qc5.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Ovine respiratory complex I FRC closed class 1
 0.05 0.00 17.02 0.12 484-589 EM 0.00 monomer 6 x SF4, 1 x FMN, 2 x FES, 2 x 3PE, 1 x ZN, 1 x NDP, 2 x ZMP, 1 x PC1 HHblits 0.30
5gpn.24.A
NADH-ubiquinone oxidoreductase 75 kDa subunit
Architecture of mammalian respirasome
 0.05 0.00 15.96 0.12 484-589 EM 0.00 monomer HHblits 0.29
7qsd.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Bovine complex I in the active state at 3.1 A
 0.05 15.96 0.12 484-589 EM 0.00 hetero-1-1-1-1-1-1-… 5 x PC1, 13 x 3PE, 6 x SF4, 2 x FES, 1 x FMN, 4 x CDL, 3 x LMT, 1 x GTP, 1 x MG, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.29
7vxu.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Matrix arm of deactive state CI from Q10 dataset
 0.05 15.96 0.12 484-589 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x PEE, 1 x PLX, 1 x 8Q1, 1 x NDP, 2 x FES, 1 x MG, 1 x CDL, 1 x ZN HHblits 0.29
7v2c.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Active state complex I from Q10 dataset
 0.05 15.96 0.12 484-589 EM 0.00 hetero-1-1-1-1-1-2-… 6 x SF4, 1 x FMN, 10 x PEE, 8 x PLX, 2 x 8Q1, 1 x NDP, 2 x UQ, 11 x CDL, 2 x FES, 1 x MG, 1 x ZN, 1 x ADP HHblits 0.29
8b9z.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Drosophila melanogaster complex I in the Active state (Dm1)
 0.05 18.09 0.12 484-589 EM 3.28 hetero-1-1-1-1-1-1-… 3 x PC1, 16 x 3PE, 6 x SF4, 4 x CDL, 2 x FES, 1 x FMN, 1 x UQ9, 1 x DGT, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.29
8ba0.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Drosophila melanogaster complex I in the Twisted state (Dm2)
 0.05 18.09 0.12 484-589 EM 3.68 hetero-1-1-1-1-1-1-… 6 x SF4, 6 x 3PE, 2 x FES, 1 x FMN, 2 x CDL, 1 x DGT, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.29
7q5y.1.A
NADH dehydrogenase I chain G
Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
 0.04 10.53 0.12 484-589 X-ray 2.70 hetero-1-1-1-1-1-1-… 8 x SF4, 2 x FES, 1 x FMN HHblits 0.24
6s6y.1.B
Tungsten-containing formylmethanofuran dehydrogenase, subunit B
X-ray crystal structure of the formyltransferase/hydrolase complex (FhcABCD) from Methylorubrum extorquens in complex with methylofuran
 0.04 10.87 0.11 484-588 X-ray 3.10 hetero-2-2-2-2-mer 1 x MFN, 4 x ZN, 4 x CA, 4 x K, 3 x DGL, 2 x GLU, 1 x IAS HHblits 0.23
3m9s.1.C
NADH-quinone oxidoreductase subunit 3
Crystal structure of respiratory complex I from Thermus thermophilus
 0.04 0.00 21.79 0.10 508-589 X-ray 4.50 monomer 7 x SF4, 2 x FES, 1 x FMN HHblits 0.29
2fug.2.C
NADH-quinone oxidoreductase chain 3
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
 0.04 0.00 21.79 0.10 508-589 X-ray 3.30 monomer 7 x SF4, 2 x FES, 1 x FMN HHblits 0.29
6zjl.1.C
NADH-quinone oxidoreductase subunit 3
Respiratory complex I from Thermus thermophilus, NAD+ dataset, major state
 0.04 0.00 21.79 0.10 508-589 EM 0.00 monomer 7 x SF4, 1 x FMN, 2 x FES HHblits 0.29
6q8o.1.C
NADH-quinone oxidoreductase subunit 3
Respiratory complex I from Thermus thermophilus with bound Piericidin A
 0.04 0.00 21.79 0.10 508-589 X-ray 3.61 monomer 7 x SF4, 1 x FMN, 2 x FES, 1 x HQH HHblits 0.29
6zjy.1.C
NADH-quinone oxidoreductase subunit 3
Respiratory complex I from Thermus thermophilus, NAD+ dataset, minor state
 0.04 0.00 21.79 0.10 508-589 EM 0.00 monomer 7 x SF4, 2 x FES HHblits 0.29
6zjn.1.C
NADH-quinone oxidoreductase subunit 3
Respiratory complex I from Thermus thermophilus, NADH dataset, minor state
 0.04 21.79 0.10 508-589 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 2 x FES HHblits 0.29
6ziy.1.C
NADH-quinone oxidoreductase subunit 3
Respiratory complex I from Thermus thermophilus, NADH dataset, major state
 0.04 21.79 0.10 508-589 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 1 x FMN, 1 x NAI, 2 x FES HHblits 0.29
7b04.1.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 5.41 0.09 695-768 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.23
7b04.2.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 5.41 0.09 695-768 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.23
3etn.1.A
putative phosphosugar isomerase involved in capsule formation
Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
 0.02 22.81 0.07 126-184 X-ray 1.70 homo-tetramer 4 x CMK HHblits 0.30
2e7z.1.A
Acetylene hydratase Ahy
Acetylene Hydratase from Pelobacter acetylenicus
 0.01 20.69 0.07 486-543 X-ray 1.26 monomer 1 x SF4, 2 x MGD, 1 x W HHblits 0.29
1jeo.1.A
HYPOTHETICAL PROTEIN MJ1247
Crystal Structure of the Hypothetical Protein MJ1247 from Methanococcus jannaschii at 2.0 A Resolution Infers a Molecular Function of 3-Hexulose-6-Phosphate isomerase.
 0.01 18.64 0.07 125-185 X-ray 2.00 monomer HHblits 0.26
7bkb.1.F
Formate dehydrogenase
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)
 0.01 17.54 0.07 126-183 EM 0.00 hetero-2-2-2-2-2-2-… 48 x SF4, 4 x FAD, 2 x FES, 4 x 9S8, 4 x ZN, 2 x MO, 4 x MGD HHblits 0.28
3sho.1.A
Transcriptional regulator, RpiR family
Crystal structure of RpiR transcription factor from Sphaerobacter thermophilus (sugar isomerase domain)
 0.01 16.07 0.07 127-184 X-ray 1.80 homo-tetramer HHblits 0.28
3sho.1.C
Transcriptional regulator, RpiR family
Crystal structure of RpiR transcription factor from Sphaerobacter thermophilus (sugar isomerase domain)
 0.01 16.07 0.07 127-184 X-ray 1.80 homo-tetramer HHblits 0.28
1x94.1.A
putative Phosphoheptose isomerase
Crystal Structure of a Hypothetical protein
 0.01 19.30 0.07 126-184 X-ray 2.50 homo-dimer HHblits 0.27
1x94.1.B
putative Phosphoheptose isomerase
Crystal Structure of a Hypothetical protein
 0.01 19.30 0.07 126-184 X-ray 2.50 homo-dimer HHblits 0.27
3hba.1.A
Putative phosphosugar isomerase
Crystal structure of a putative phosphosugar isomerase (sden_2705) from shewanella denitrificans os217 at 2.00 A resolution
 0.01 21.82 0.07 128-184 X-ray 2.00 homo-dimer HHblits 0.29
3hba.1.B
Putative phosphosugar isomerase
Crystal structure of a putative phosphosugar isomerase (sden_2705) from shewanella denitrificans os217 at 2.00 A resolution
 0.01 21.82 0.07 128-184 X-ray 2.00 homo-dimer HHblits 0.29
7en6.1.A
HTH-type transcriptional regulator MurR
The crystal structure of Escherichia coli MurR in apo form
 0.01 17.54 0.07 126-184 X-ray 2.28 homo-tetramer HHblits 0.26
7en6.1.B
HTH-type transcriptional regulator MurR
The crystal structure of Escherichia coli MurR in apo form
 0.01 17.54 0.07 126-184 X-ray 2.28 homo-tetramer HHblits 0.26
7en6.1.C
HTH-type transcriptional regulator MurR
The crystal structure of Escherichia coli MurR in apo form
 0.01 17.54 0.07 126-184 X-ray 2.28 homo-tetramer HHblits 0.26
7en6.1.D
HTH-type transcriptional regulator MurR
The crystal structure of Escherichia coli MurR in apo form
 0.01 17.54 0.07 126-184 X-ray 2.28 homo-tetramer HHblits 0.26
7en5.1.A
HTH-type transcriptional regulator MurR
The crystal structure of Escherichia coli MurR in complex with N-acetylglucosamine-6-phosphate
 0.01 17.54 0.07 126-184 X-ray 1.25 homo-tetramer 4 x 4QY, 4 x MXE HHblits 0.26
7l5i.1.A
Trimethylamine-N-oxide reductase
Crystal Structure of Haemophilus influenzae MtsZ at pH 7.0
 0.01 27.78 0.07 127-181 X-ray 1.73 monomer 2 x MGD, 1 x MO, 1 x O HHblits 0.30
7l5s.1.A
Trimethylamine-N-oxide reductase
Crystal Structure of Haemophilus influenzae MtsZ at pH 5.5
 0.01 27.78 0.07 127-181 X-ray 2.09 monomer 1 x O, 2 x MGD, 1 x MO HHblits 0.30
1s7g.1.D
NAD-dependent deacetylase 2
Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
 0.01 20.75 0.07 124-178 X-ray 2.30 homo-pentamer 9 x ZN, 3 x NAD, 1 x APR, 1 x 2PE HHblits 0.32
1ma3.1.A
Transcriptional regulatory protein, Sir2 family
Structure of a Sir2 enzyme bound to an acetylated p53 peptide
 0.02 20.75 0.07 124-178 X-ray 2.00 hetero-oligomer 1 x ZN, 1 x MES HHblits 0.32
1s7g.1.B
NAD-dependent deacetylase 2
Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
 0.01 20.75 0.07 124-178 X-ray 2.30 homo-pentamer 9 x ZN, 3 x NAD, 1 x APR, 1 x 2PE HHblits 0.32
1s7g.1.A
NAD-dependent deacetylase 2
Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
 0.01 20.75 0.07 124-178 X-ray 2.30 homo-pentamer 9 x ZN, 3 x NAD, 1 x APR, 1 x 2PE HHblits 0.32
1s7g.1.C
NAD-dependent deacetylase 2
Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
 0.01 20.75 0.07 124-178 X-ray 2.30 homo-pentamer 9 x ZN, 3 x NAD, 1 x APR, 1 x 2PE HHblits 0.32
1s7g.1.E
NAD-dependent deacetylase 2
Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
 0.01 20.75 0.07 124-178 X-ray 2.30 homo-pentamer 9 x ZN, 3 x NAD, 1 x APR, 1 x 2PE HHblits 0.32
4twj.1.A
NAD-dependent protein deacylase 2
The structure of Sir2Af2 bound to a myristoylated histone peptide
 0.01 20.75 0.07 124-178 X-ray 1.65 hetero-1-1-mer 1 x ZN HHblits 0.32
4s12.1.A
N-acetylmuramic acid 6-phosphate etherase
1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.
 0.01 21.43 0.07 127-184 X-ray 1.55 homo-dimer HHblits 0.27
4s12.2.A
N-acetylmuramic acid 6-phosphate etherase
1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.
 0.01 21.43 0.07 127-184 X-ray 1.55 homo-dimer HHblits 0.27
4s12.2.B
N-acetylmuramic acid 6-phosphate etherase
1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.
 0.01 21.43 0.07 127-184 X-ray 1.55 homo-dimer HHblits 0.27
1m2j.1.A
Silent Information Regulator 2
Sir2 homologue H80N mutant-ADP ribose complex
 0.02 18.52 0.07 124-179 X-ray 1.70 monomer 1 x ZN, 1 x APR HHblits 0.30
1ici.1.A
TRANSCRIPTIONAL REGULATORY PROTEIN, SIR2 FAMILY
CRYSTAL STRUCTURE OF A SIR2 HOMOLOG-NAD COMPLEX
 0.02 18.52 0.07 124-179 X-ray 2.10 homo-dimer 2 x ZN, 2 x NAD HHblits 0.30
1dms.1.A
DMSO REDUCTASE
STRUCTURE OF DMSO REDUCTASE
 0.01 25.93 0.07 127-181 X-ray 1.88 monomer 2 x PGD, 1 x 2MO HHblits 0.30
3riy.2.A
NAD-dependent deacetylase sirtuin-5
Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase
 0.01 16.67 0.07 123-178 X-ray 1.55 hetero-oligomer 1 x ZN, 1 x NAD HHblits 0.30
2i2w.1.A
Phosphoheptose isomerase
Crystal Structure of Escherichia Coli Phosphoheptose Isomerase
 0.01 25.45 0.07 126-182 X-ray 1.95 homo-dimer HHblits 0.28
2i2w.2.B
Phosphoheptose isomerase
Crystal Structure of Escherichia Coli Phosphoheptose Isomerase
 0.01 25.45 0.07 126-182 X-ray 1.95 homo-dimer HHblits 0.28
3k35.1.A
NAD-dependent deacetylase sirtuin-6
Crystal Structure of Human SIRT6
 0.01 16.67 0.07 123-178 X-ray 2.00 monomer 1 x ZN, 1 x APR HHblits 0.29
2v3v.1.A
PERIPLASMIC NITRATE REDUCTASE
A NEW CATALYTIC MECHANISM OF PERIPLASMIC NITRATE REDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 FROM CRYSTALLOGRAPHIC AND EPR DATA AND BASED ON DETAILED ANALYSIS OF THE SIXTH LIGAND
 0.01 21.82 0.07 127-182 X-ray 1.99 monomer 1 x SF4, 1 x MO, 2 x MGD, 4 x LCP HHblits 0.28
6cz7.1.A
ArrA
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3
 0.01 18.18 0.07 126-181 X-ray 1.62 hetero-1-1-mer 5 x SF4, 2 x MGD, 1 x MO, 1 x PG5 HHblits 0.28
4ydd.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB from Azospira suillum PS
 0.01 16.36 0.07 127-181 X-ray 1.86 hetero-oligomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.28
1m2g.1.A
Silent Information Regulator 2
Sir2 homologue-ADP ribose complex
 0.02 18.87 0.07 124-178 X-ray 1.70 monomer 1 x ZN, 1 x APR HHblits 0.30
1m2n.1.A
Silent Information Regulator 2
Sir2 homologues (D102G/F159A/R170A) mutant-2'-O-acetyl ADP ribose complex
 0.02 18.87 0.07 124-178 X-ray 2.60 homo-dimer 2 x ZN, 2 x OAD HHblits 0.30
1m2n.1.B
Silent Information Regulator 2
Sir2 homologues (D102G/F159A/R170A) mutant-2'-O-acetyl ADP ribose complex
 0.01 18.87 0.07 124-178 X-ray 2.60 homo-dimer 2 x ZN, 2 x OAD HHblits 0.30
6enx.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Zebrafish Sirt5 in complex with stalled bicyclic intermediate of inhibitory compound 10
 0.01 16.67 0.07 123-178 X-ray 1.95 monomer 1 x ZN, 1 x BJW HHblits 0.29
1s5p.1.A
NAD-dependent deacetylase
Structure and substrate binding properties of cobB, a Sir2 homolog protein deacetylase from Eschericia coli.
 0.01 15.09 0.07 124-178 X-ray 1.96 monomer 1 x ZN, 1 x LYS-GLY-GLY-ALA-ALY-ARG-HIS-ARG HHblits 0.30
5xhs.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of SIRT5 complexed with a fluorogenic small-molecule substrate SuBKA
 0.01 16.98 0.07 124-178 X-ray 2.19 monomer 1 x PHQ, 1 x SLL, 1 x MCM, 1 x ZN HHblits 0.30
6ljm.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of human Sirt5 in complex with the fluorogenic tetrapeptide substrate P13
 0.01 16.98 0.07 124-178 X-ray 1.78 monomer 1 x ZN, 1 x SIN, 1 x MCM, 1 x SER-LEU-GLY-LYS HHblits 0.30
6ljk.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of human Sirt5 in complex with an internally quenched fluorescent substrate GluIQF
 0.01 16.98 0.07 124-178 X-ray 1.39 monomer 1 x ZN, 1 x GUA, 1 x BE2-SER-ALA-ILE-LYS-SER-NIY-GLY-SET HHblits 0.30
6acp.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
histone lysine desuccinylase Sirt5 in complex with succinyl peptide H4K91
 0.01 16.98 0.07 124-178 X-ray 2.30 monomer 1 x ZN, 1 x TYR-ALA-LEU-SLL-ARG-GLN-GLY HHblits 0.30
4g1c.2.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Human SIRT5 bound to Succ-IDH2 and Carba-NAD
 0.01 16.98 0.07 124-178 X-ray 1.94 monomer 1 x ZN, 1 x ACE-ALA-VAL-SLL-CYS-ALA-NH2 HHblits 0.30
4g1c.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Human SIRT5 bound to Succ-IDH2 and Carba-NAD
 0.01 16.98 0.07 124-178 X-ray 1.94 monomer 1 x ZN, 1 x CNA, 1 x ACE-ALA-VAL-SLL-CYS-ALA-NH2 HHblits 0.30
1aa6.1.A
FORMATE DEHYDROGENASE H
REDUCED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
 0.01 20.00 0.07 126-181 X-ray 2.30 monomer 1 x SF4, 2 x MGD, 1 x 4MO HHblits 0.27
1fdo.1.A
FORMATE DEHYDROGENASE H
OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
 0.01 20.00 0.07 126-181 X-ray 2.80 monomer 1 x SF4, 2 x MGD, 1 x 6MO HHblits 0.27
2iv2.1.A
Formate dehydrogenase H
Reinterpretation of reduced form of formate dehydrogenase H from E. coli
 0.01 20.00 0.07 126-181 X-ray 2.27 monomer 1 x SF4, 1 x 2MD, 1 x MGD HHblits 0.27
7z0t.1.G
Formate dehydrogenase H
Structure of the Escherichia coli formate hydrogenlyase complex (aerobic preparation, composite structure)
 0.01 20.00 0.07 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 1 x NI, 1 x FCO, 8 x SF4, 1 x FE, 2 x MGD, 1 x 6MO HHblits 0.27
4ivn.1.A
Transcriptional regulator
The Vibrio vulnificus NanR protein complexed with ManNAc-6P
 0.01 12.73 0.07 126-182 X-ray 1.90 homo-dimer 2 x BMX HHblits 0.27
1e5v.2.A
Dimethyl sulfoxide/trimethylamine N-oxide reductase
OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES BUFFER
 0.01 24.53 0.07 127-180 X-ray 2.40 monomer 2 x PGD, 1 x 2MO HHblits 0.30
4dmr.1.A
DMSO REDUCTASE
REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS WITH BOUND DMSO SUBSTRATE
 0.01 24.53 0.07 127-180 X-ray 1.90 monomer 2 x PGD, 1 x 4MO, 1 x O HHblits 0.30
1e60.1.A
Dimethyl sulfoxide/trimethylamine N-oxide reductase
OXIDIZED DMSO REDUCTASE EXPOSED TO HEPES - Structure II BUFFER
 0.01 24.53 0.07 127-180 X-ray 2.00 monomer 2 x PGD, 1 x 2MO HHblits 0.30
1e18.1.A
DMSO REDUCTASE.
TUNGSTEN-SUSBSTITUTED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS
 0.01 24.53 0.07 127-180 X-ray 2.00 monomer 2 x PGD, 1 x 6WO HHblits 0.30
1tmo.1.A
TRIMETHYLAMINE N-OXIDE REDUCTASE
TRIMETHYLAMINE N-OXIDE REDUCTASE FROM SHEWANELLA MASSILIA
 0.01 18.52 0.07 127-181 X-ray 2.50 monomer 2 x 2MD, 1 x 2MO HHblits 0.28
3zg6.1.A
NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-6
The novel de-long chain fatty acid function of human sirt6
 0.01 16.98 0.07 124-178 X-ray 2.20 hetero-oligomer 1 x ZN, 1 x APR HHblits 0.30
6xvg.3.A
NAD-dependent protein deacetylase sirtuin-6
Human Sirt6 3-318 in complex with ADP-ribose and the activator MDL-801
 0.01 16.98 0.07 124-178 X-ray 2.10 monomer 1 x AR6, 1 x ZN, 1 x 8L9 HHblits 0.30
5y2f.1.A
NAD-dependent protein deacetylase sirtuin-6
Human SIRT6 in complex with allosteric activator MDL-801
 0.01 16.98 0.07 124-178 X-ray 2.53 monomer 1 x AR6, 1 x 8L9, 1 x ZN, 1 x HDR, 1 x THR-ALA-ARG-LYS-SER-THR-GLY-GLY HHblits 0.30
5x16.1.A
NAD-dependent protein deacetylase sirtuin-6
Sirt6 apo structure
 0.01 16.98 0.07 124-178 X-ray 1.97 monomer 1 x AR6, 1 x ZN HHblits 0.30
3pki.1.A
NAD-dependent deacetylase sirtuin-6
Human SIRT6 crystal structure in complex with ADP ribose
 0.01 16.98 0.07 123-177 X-ray 2.04 monomer 1 x ZN, 1 x AR6 HHblits 0.30
7cl0.1.A
NAD-dependent protein deacetylase sirtuin-6
Crystal structure of human SIRT6
 0.01 16.98 0.07 124-178 X-ray 2.53 monomer 1 x AR6, 1 x ZN, 1 x G4U, 1 x THR-ALA-ARG-LYS-SER-THR-GLY HHblits 0.30
5lu6.1.A
Phosphoheptose isomerase
Heptose isomerase mutant - H64Q
 0.01 8.77 0.07 126-184 X-ray 1.67 homo-tetramer 4 x I22 HHblits 0.24
7qv7.1.L
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.01 14.29 0.07 486-542 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.25
7qv7.1.O
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.01 14.29 0.07 486-542 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.25
4aay.1.A
AROA
Crystal Structure of the arsenite oxidase protein complex from Rhizobium species strain NT-26
 0.00 12.50 0.07 127-182 X-ray 2.70 hetero-oligomer 4 x MGD, 2 x O, 2 x 4MO, 2 x F3S, 2 x FES HHblits 0.25
7qv7.1.L
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.01 24.07 0.07 127-181 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.28
7qv7.1.O
Hydrogen dependent carbon dioxide reductase subunit FdhF
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
 0.01 24.07 0.07 127-181 EM 0.00 hetero-2-6-6-2-mer 52 x SF4, 6 x 402 HHblits 0.28
6tg9.1.A
Formate dehydrogenase subunit alpha
Cryo-EM Structure of NADH reduced form of NAD+-dependent Formate Dehydrogenase from Rhodobacter capsulatus
 0.01 22.22 0.07 127-181 EM 3.24 hetero-2-2-2-2-mer 4 x MGD, 2 x 6MO, 4 x FES, 10 x SF4, 2 x H2S, 2 x FMN, 2 x NAI HHblits 0.28
7vw6.1.A
Formate dehydrogenase
Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1
 0.01 20.37 0.07 127-181 EM 0.00 hetero-1-1-mer 4 x SF4, 2 x FES, 2 x MGD, 1 x W, 1 x FMN HHblits 0.28
7e5z.1.A
Formate dehydrogenase
Dehydrogenase holoenzyme
 0.00 20.37 0.07 127-181 EM 0.00 hetero-1-1-mer 1 x W, 2 x MGD, 2 x FES, 4 x SF4, 1 x FMN HHblits 0.28
2v45.1.A
PERIPLASMIC NITRATE REDUCTASE
A NEW CATALYTIC MECHANISM OF PERIPLASMIC NITRATE REDUCTASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 FROM CRYSTALLOGRAPHIC AND EPR DATA AND BASED ON DETAILED ANALYSIS OF THE SIXTH LIGAND
 0.01 20.00 0.07 127-182 X-ray 2.40 monomer 1 x SF4, 1 x MO, 2 x MGD, 1 x LCP HHblits 0.27
5ltz.1.A
Phosphoheptose isomerase
GmhA_mutant Q175E
 0.01 8.77 0.07 127-185 X-ray 1.67 homo-tetramer 4 x ZN, 4 x I22 HHblits 0.24
1m2h.1.A
Silent Information Regulator 2
Sir2 homologue S24A mutant-ADP ribose complex
 0.01 19.23 0.06 124-177 X-ray 1.80 monomer 1 x ZN, 1 x APR HHblits 0.31
1m2k.1.A
Silent Information Regulator 2
Sir2 homologue F159A mutant-ADP ribose complex
 0.01 19.23 0.06 124-177 X-ray 1.47 monomer 1 x ZN, 1 x APR HHblits 0.31
2e7z.1.A
Acetylene hydratase Ahy
Acetylene Hydratase from Pelobacter acetylenicus
 0.02 16.36 0.07 127-182 X-ray 1.26 monomer 1 x SF4, 2 x MGD, 1 x W HHblits 0.27
4twi.1.A
NAD-dependent protein deacylase 1
The structure of Sir2Af1 bound to a succinylated histone peptide
 0.02 19.23 0.06 124-177 X-ray 1.79 hetero-1-1-mer 1 x ZN HHblits 0.31
6fky.2.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of zebrafish Sirtuin 5 in complex with 3-(benzylthio)succinyl-CPS1 peptide
 0.01 16.98 0.07 123-177 X-ray 2.98 monomer 1 x ZN HHblits 0.29
6fky.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of zebrafish Sirtuin 5 in complex with 3-(benzylthio)succinyl-CPS1 peptide
 0.01 16.98 0.07 123-177 X-ray 2.98 monomer 1 x ZN, 1 x E9N, 1 x DZK, 2 x GZB-VAL-LEU-LYS-GLU-TYR-GLY-VAL HHblits 0.29
6flg.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of zebrafish Sirtuin 5 in complex with 3(S)-(naphthylthio)succinyl-CPS1 peptide
 0.01 16.98 0.07 123-177 X-ray 2.50 monomer 1 x ZN, 1 x GZB-VAL-LEU-DQK-GLU-TYR-GLY-VAL HHblits 0.29
5bwl.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal Structure of SIRT5 in Complex with a Coumarin-Labelled Succinyl Peptide
 0.01 17.31 0.06 124-177 X-ray 1.55 monomer 1 x ZN, 1 x MCM, 1 x LEU-GLY-SLL HHblits 0.31
6aco.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
histone lysine desuccinylase Sirt5 in complex with succinyl peptide H2BK120
 0.01 17.31 0.06 124-177 X-ray 1.71 monomer 1 x ZN, 1 x ALA-VAL-THR-SLL-TYR-THR-SER HHblits 0.31
6eqs.3.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Human Sirt5 in complex with stalled peptidylimidate intermediate of inhibitory compound 29
 0.01 17.31 0.06 124-177 X-ray 1.32 monomer 1 x ZN, 1 x BV8, 1 x BU2 HHblits 0.31
4hda.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of human Sirt5 in complex with Fluor-de-Lys peptide and resveratrol
 0.01 17.31 0.06 124-177 X-ray 2.60 monomer 1 x ZN HHblits 0.31
4hda.2.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Crystal structure of human Sirt5 in complex with Fluor-de-Lys peptide and resveratrol
 0.01 17.31 0.06 124-177 X-ray 2.60 monomer 1 x ZN, 1 x STL, 1 x HIS-LYS-FDL HHblits 0.31
2nyr.1.A
NAD-dependent deacetylase sirtuin-5
Crystal Structure of Human Sirtuin Homolog 5 in Complex with Suramin
 0.01 17.31 0.06 124-177 X-ray 2.06 homo-dimer 1 x SVR, 2 x ZN HHblits 0.31
2nyr.1.B
NAD-dependent deacetylase sirtuin-5
Crystal Structure of Human Sirtuin Homolog 5 in Complex with Suramin
 0.01 17.31 0.06 124-177 X-ray 2.06 homo-dimer 1 x SVR, 2 x ZN HHblits 0.31
2b4y.1.A
NAD-dependent deacetylase sirtuin-5
Crystal Structure of Human Sirtuin homolog 5
 0.01 17.31 0.06 124-177 X-ray 1.90 monomer 1 x ZN, 1 x APR HHblits 0.31
2b4y.3.A
NAD-dependent deacetylase sirtuin-5
Crystal Structure of Human Sirtuin homolog 5
 0.01 17.31 0.06 124-177 X-ray 1.90 monomer 1 x ZN, 1 x APR HHblits 0.31
5e7o.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
 0.01 16.67 0.07 128-181 X-ray 2.40 hetero-oligomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.28
7b04.1.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 16.67 0.07 485-539 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.28
7b04.2.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 16.67 0.07 485-539 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.28
7b04.1.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 12.73 0.07 127-181 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.26
7b04.2.B
Nitrite oxidoreductase subunit A
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
 0.01 12.73 0.07 127-181 X-ray 2.97 hetero-1-1-1-mer 4 x SF4, 1 x F3S, 2 x MD1, 1 x MO, 1 x HEM, 2 x CA HHblits 0.26
8bqg.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min
 0.01 18.18 0.07 126-181 X-ray 1.95 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.26
1g8j.1.A
ARSENITE OXIDASE
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
 0.01 16.36 0.07 127-182 X-ray 2.03 hetero-oligomer 2 x MGD, 1 x O, 1 x 4MO, 1 x F3S, 1 x FES HHblits 0.26
6rxo.1.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162A) in complex with H4K16-Buturyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.95 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.1.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.3.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.4.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.5.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.6.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxm.2.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.92 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxo.2.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G, I131C, V162A) in complex with H4K16-Buturyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.95 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxp.2.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G,I131C,V162A) in complex with H4K16-Crotonyl peptide
 0.02 15.38 0.06 124-177 X-ray 1.80 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxq.4.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac2 (A76G,I131C,V162A) in complex with H4K16Cr-2'OH-ADPr peptide intermediate after soaking
 0.01 15.38 0.06 124-177 X-ray 1.70 hetero-1-1-mer 1 x KMQ HHblits 0.31
6rxs.1.A
NAD-dependent protein deacylase
Crystal structure of CobB Ac3(A76G,Y92A, I131L, V187Y) in complex with H4K16-Acetyl peptide
 0.01 15.38 0.06 124-177 X-ray 1.60 hetero-1-1-mer 1 x ZN HHblits 0.31
6rxj.1.A
NAD-dependent protein deacylase
Crystal structure of CobB wt in complex with H4K16-Acetyl peptide
 0.02 15.38 0.06 124-177 X-ray 1.60 hetero-1-1-mer 1 x ZN HHblits 0.31
5mf6.1.A
NAD-dependent protein deacetylase sirtuin-6
Human Sirt6 in complex with activator UBCS039
 0.01 17.31 0.06 124-177 X-ray 1.87 monomer 1 x AR6, 1 x ZN, 1 x 7M2 HHblits 0.30
1ogy.1.A
PERIPLASMIC NITRATE REDUCTASE
Crystal structure of the heterodimeric nitrate reductase from Rhodobacter sphaeroides
 0.01 14.29 0.07 127-182 X-ray 3.20 hetero-1-1-mer 1 x SF4, 1 x MO, 2 x MGD, 2 x HEC HHblits 0.24
1eu1.1.A
DIMETHYL SULFOXIDE REDUCTASE
THE CRYSTAL STRUCTURE OF RHODOBACTER SPHAEROIDES DIMETHYLSULFOXIDE REDUCTASE REVEALS TWO DISTINCT MOLYBDENUM COORDINATION ENVIRONMENTS.
 0.01 26.42 0.07 127-180 X-ray 1.30 monomer 3 x GLC, 1 x CD, 2 x MGD, 1 x 6MO, 2 x O HHblits 0.29
5lu7.1.A
Phosphoheptose isomerase
Heptose isomerase GmhA mutant - D61A
 0.01 8.93 0.07 127-184 X-ray 1.92 homo-tetramer 4 x ZN, 4 x M7P HHblits 0.24
5lu5.1.A
Phosphoheptose isomerase
A quantum half-site enzyme
 0.01 8.93 0.07 126-183 X-ray 1.55 homo-tetramer 4 x M7P HHblits 0.24
4utn.1.A
NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL
Crystal structure of zebrafish Sirtuin 5 in complex with succinylated CPS1-peptide
 0.01 17.31 0.06 124-177 X-ray 3.00 monomer 1 x ZN, 1 x BEZ-GLY-VAL-LEU-SLL-GLU-TYR-GLY-VAL HHblits 0.30
4utn.2.A
NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL
Crystal structure of zebrafish Sirtuin 5 in complex with succinylated CPS1-peptide
 0.01 17.31 0.06 124-177 X-ray 3.00 monomer 1 x ZN HHblits 0.30
6eo0.1.A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Zebrafish Sirt5 in complex with stalled peptidylimidate and bicyclic intermediate of inhibitory compound 29
 0.01 17.31 0.06 124-177 X-ray 2.40 monomer 1 x ZN, 1 x BV8, 1 x BVT HHblits 0.30
7bkb.1.F
Formate dehydrogenase
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)
 0.01 12.96 0.07 486-540 EM 0.00 hetero-2-2-2-2-2-2-… 48 x SF4, 4 x FAD, 2 x FES, 4 x 9S8, 4 x ZN, 2 x MO, 4 x MGD HHblits 0.27
6sdr.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
 0.01 18.52 0.07 127-181 X-ray 2.10 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.27
6sdv.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing,Formate dehydrogenase, alpha subunit, selenocysteine-containing,W-formate dehydrogenase - alpha subunit
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
 0.01 18.52 0.07 126-180 X-ray 1.90 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x W, 1 x H2S HHblits 0.27
8e9g.1.G
NADH-quinone oxidoreductase subunit G
Mycobacterial respiratory complex I with both quinone positions modelled
 0.01 20.75 0.07 128-182 EM 0.00 hetero-1-1-1-1-1-1-… HHblits 0.28
2ivf.1.A
ETHYLBENZENE DEHYDROGENASE ALPHA-SUBUNIT
ETHYLBENZENE DEHYDROGENASE FROM AROMATOLEUM AROMATICUM
 0.01 12.96 0.07 128-181 X-ray 1.88 hetero-oligomer 1 x MES, 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S, 1 x HEM HHblits 0.26
2ivf.1.A
ETHYLBENZENE DEHYDROGENASE ALPHA-SUBUNIT
ETHYLBENZENE DEHYDROGENASE FROM AROMATOLEUM AROMATICUM
 0.01 16.67 0.07 486-540 X-ray 1.88 hetero-oligomer 1 x MES, 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S, 1 x HEM HHblits 0.26
2nya.1.A
Periplasmic nitrate reductase
Crystal structure of the periplasmic nitrate reductase (NAP) from Escherichia coli
 0.01 12.50 0.07 127-182 X-ray 2.50 monomer 1 x SF4, 1 x 6MO, 2 x MGD HHblits 0.23
5e7o.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
 0.01 12.73 0.07 486-541 X-ray 2.40 hetero-oligomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.25
2vpz.1.A
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE NATIVE STRUCTURE
 0.01 8.93 0.07 486-541 X-ray 2.40 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO HHblits 0.23
2vpx.1.D
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE WITH BOUND QUINONE (UQ1)
 0.01 8.93 0.07 486-541 X-ray 3.10 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO, 2 x UQ1 HHblits 0.23
7q5y.1.A
NADH dehydrogenase I chain G
Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
 0.01 16.67 0.07 127-182 X-ray 2.70 hetero-1-1-1-1-1-1-… 8 x SF4, 2 x FES, 1 x FMN HHblits 0.26
2x3y.1.A
PHOSPHOHEPTOSE ISOMERASE
Crystal structure of GmhA from Burkholderia pseudomallei
 0.01 9.09 0.07 127-183 X-ray 2.40 homo-tetramer 4 x ZN HHblits 0.24
7p63.1.C
NADH-quinone oxidoreductase
Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 6, Closed state
 0.01 13.21 0.07 127-181 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x CA, 1 x DCQ, 4 x LFA, 8 x 3PE HHblits 0.27
7p61.1.C
NADH-quinone oxidoreductase
Complex I from E. coli, DDM-purified, with NADH, Resting state
 0.01 13.21 0.07 127-181 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x CA, 2 x 3PE, 1 x UQ8 HHblits 0.27
6sdr.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
 0.01 15.09 0.07 486-539 X-ray 2.10 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.27
2vpz.1.A
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE NATIVE STRUCTURE
 0.01 16.67 0.07 128-182 X-ray 2.40 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO HHblits 0.26
2vpx.1.D
THIOSULFATE REDUCTASE
POLYSULFIDE REDUCTASE WITH BOUND QUINONE (UQ1)
 0.01 16.67 0.07 128-182 X-ray 3.10 hetero-oligomer 10 x SF4, 4 x MGD, 2 x MO, 2 x UQ1 HHblits 0.26
3u31.1.A
Transcriptional regulatory protein sir2 homologue
Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine
 0.01 19.23 0.06 124-177 X-ray 2.20 hetero-oligomer 1 x NAD, 1 x ZN HHblits 0.29
3jwp.1.A
Transcriptional regulatory protein sir2 homologue
Crystal structure of Plasmodium falciparum SIR2A (PF13_0152) in complex with AMP
 0.01 19.23 0.06 124-177 X-ray 2.65 homo-trimer 3 x AMP, 3 x ZN HHblits 0.29
7nz1.1.E
NADH-quinone oxidoreductase subunit G
Respiratory complex I from Escherichia coli - focused refinement of cytoplasmic arm
 0.01 13.21 0.07 127-181 EM 0.00 hetero-1-1-1-1-1-1-… 7 x SF4, 2 x FES, 1 x FMN, 1 x CA HHblits 0.27
5ojn.1.A
NAD-dependent protein deacylase
Sirtuin 4 from Xenopus tropicalis in complex with thioacetyl-ADP-ribose
 0.01 9.26 0.07 123-178 X-ray 1.80 monomer 1 x ZN, 1 x 9X8 HHblits 0.26
5oj7.1.A
NAD-dependent protein deacylase
Sirtuin 4 orthologue from Xenopus Tropicalis in complex with ADP-ribose
 0.01 9.26 0.07 123-178 X-ray 1.58 monomer 1 x AR6, 1 x ZN HHblits 0.26
2h59.1.B
NAD-dependent deacetylase
Sir2 H116A-deacetylated p53 peptide-3'-o-acetyl ADP ribose
 0.01 11.54 0.06 124-177 X-ray 1.90 hetero-2-2-mer 2 x ZN, 1 x APR, 1 x 3OD HHblits 0.29
3jr3.1.A
NAD-dependent deacetylase
Sir2 bound to acetylated peptide
 0.01 11.54 0.06 124-177 X-ray 1.50 hetero-1-1-mer 1 x ZN HHblits 0.29
2h4h.1.A
NAD-dependent deacetylase
Sir2 H116Y mutant-p53 peptide-NAD
 0.01 11.54 0.06 124-177 X-ray 1.99 hetero-1-1-mer 1 x ZN, 1 x NAD HHblits 0.29
1yc5.1.A
NAD-dependent deacetylase
Sir2-p53 peptide-nicotinamide
 0.01 11.54 0.06 124-177 X-ray 1.40 hetero-oligomer 1 x ZN, 1 x NCA HHblits 0.29
2h2i.1.A
NAD-dependent deacetylase
The Structural basis of Sirtuin Substrate Affinity
 0.01 11.54 0.06 124-177 X-ray 1.80 homo-octamer 8 x ZN, 8 x ZPG HHblits 0.29
4bv2.3.A
NAD-DEPENDENT PROTEIN DEACETYLASE
CRYSTAL STRUCTURE OF SIR2 IN COMPLEX WITH THE INHIBITOR EX-527, 2'-O-ACETYL-ADP-RIBOSE AND DEACETYLATED P53-PEPTIDE
 0.01 11.54 0.06 124-177 X-ray 3.30 hetero-oligomer 1 x OCZ, 1 x OAD, 1 x ZN HHblits 0.29
6f0k.1.B
Fe-S-cluster-containing hydrogenase
Alternative complex III
 0.01 15.09 0.07 127-180 EM 0.00 hetero-1-1-1-1-1-1-… 6 x HEC, 1 x F3S, 3 x SF4 HHblits 0.27
1kqf.1.A
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT
FORMATE DEHYDROGENASE N FROM E. COLI
 0.01 11.54 0.06 486-538 X-ray 1.60 hetero-oligomer 3 x 6MO, 15 x SF4, 6 x MGD, 6 x HEM, 3 x CDL HHblits 0.28
8bqg.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min
 0.01 15.38 0.06 486-538 X-ray 1.95 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x H2S, 1 x W HHblits 0.27
6sdv.1.A
Formate dehydrogenase, alpha subunit, selenocysteine-containing,Formate dehydrogenase, alpha subunit, selenocysteine-containing,W-formate dehydrogenase - alpha subunit
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
 0.01 15.38 0.06 486-538 X-ray 1.90 hetero-1-1-mer 2 x MGD, 4 x SF4, 1 x W, 1 x H2S HHblits 0.27
7t2r.1.A
NiFe hydrogenase subunit A
Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN-free apo state
 0.00 19.61 0.06 127-181 EM 0.00 hetero-2-2-2-2-2-mer 6 x FES, 12 x SF4, 2 x 3NI, 2 x FCO HHblits 0.28
7t30.1.A
NiFe hydrogenase subunit A
Structure of electron bifurcating Ni-Fe hydrogenase complex HydABCSL in FMN/NAD(H) bound state
 0.00 19.61 0.06 127-181 EM 0.00 hetero-2-2-2-2-2-mer 4 x FES, 12 x SF4, 2 x NAD, 2 x FMN, 2 x 3NI, 2 x FCO HHblits 0.28
3o5a.1.A
Periplasmic nitrate reductase
Crystal Structure of partially reduced Periplasmic Nitrate Reductase from Cupriavidus necator using Ionic Liquids
 0.01 15.09 0.07 126-181 X-ray 1.72 hetero-oligomer 1 x SF4, 1 x MOS, 2 x MGD, 2 x HEC HHblits 0.25
4ydd.1.A
DMSO reductase family type II enzyme, molybdopterin subunit
Crystal structure of the perchlorate reductase PcrAB from Azospira suillum PS
 0.01 13.21 0.07 486-539 X-ray 1.86 hetero-oligomer 4 x SF4, 1 x MO, 1 x MGD, 1 x MD1, 1 x F3S HHblits 0.25
6lod.1.B
Fe-S-cluster-containing hydrogenase components 1-like protein
Cryo-EM structure of the air-oxidized photosynthetic alternative complex III from Roseiflexus castenholzii
 0.00 19.23 0.06 127-179 EM 0.00 hetero-1-1-1-1-1-1-… 6 x HEC, 2 x EL6, 3 x SF4, 1 x F3S HHblits 0.27
6btm.1.B
Alternative Complex III subunit B
Structure of Alternative Complex III from Flavobacterium johnsoniae (Wild Type)
 0.01 15.38 0.06 127-179 EM 3.40 hetero-1-1-1-1-1-1-… 6 x HEC, 1 x F3S, 1 x SF4, 2 x E87 HHblits 0.26
5t5i.1.B
Tungsten formylmethanofuran dehydrogenase subunit B
TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, ORTHORHOMBIC FORM AT 1.9 A
 0.01 17.65 0.06 127-181 X-ray 1.90 hetero-oligomer 4 x ZN, 2 x MG, 18 x K, 22 x SF4, 2 x W, 4 x MGD, 2 x H2S, 2 x CA HHblits 0.27
4v4c.1.A
Pyrogallol hydroxytransferase large subunit
Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici
 0.00 13.21 0.07 127-180 X-ray 2.35 hetero-oligomer 2 x CA, 2 x MGD, 1 x 4MO, 3 x SF4 HHblits 0.24
7bkb.1.L
Formylmethanofuran dehydrogenase, subunit B
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from Methanospirillum hungatei (hexameric, composite structure)
 0.01 9.62 0.06 127-182 EM 0.00 hetero-2-2-2-2-2-2-… 48 x SF4, 4 x FAD, 2 x FES, 4 x 9S8, 4 x ZN, 2 x MO, 4 x MGD HHblits 0.23
8b9z.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Drosophila melanogaster complex I in the Active state (Dm1)
 0.00 18.37 0.06 126-181 EM 3.28 hetero-1-1-1-1-1-1-… 3 x PC1, 16 x 3PE, 6 x SF4, 4 x CDL, 2 x FES, 1 x FMN, 1 x UQ9, 1 x DGT, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
8ba0.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Drosophila melanogaster complex I in the Twisted state (Dm2)
 0.00 18.37 0.06 126-181 EM 3.68 hetero-1-1-1-1-1-1-… 6 x SF4, 6 x 3PE, 2 x FES, 1 x FMN, 2 x CDL, 1 x DGT, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
6zr2.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A
 0.00 16.33 0.06 127-182 EM 3.10 hetero-1-1-1-1-1-1-… 6 x SF4, 4 x PC1, 2 x FES, 1 x FMN, 9 x 3PE, 7 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
6g72.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Mouse mitochondrial complex I in the deactive state
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x ADP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
7ak6.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x PC1, 2 x FES, 1 x FMN, 4 x 3PE, 2 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
7ak5.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of respiratory complex I in the deactive state from Mus musculus at 3.2 A
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x PC1, 2 x FES, 1 x FMN, 8 x 3PE, 4 x CDL, 1 x ATP, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.27
5gpn.24.A
NADH-ubiquinone oxidoreductase 75 kDa subunit
Architecture of mammalian respirasome
 0.00 18.37 0.06 127-182 EM 0.00 monomer HHblits 0.27
7vxu.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Matrix arm of deactive state CI from Q10 dataset
 0.00 18.37 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x PEE, 1 x PLX, 1 x 8Q1, 1 x NDP, 2 x FES, 1 x MG, 1 x CDL, 1 x ZN HHblits 0.27
7v2c.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Active state complex I from Q10 dataset
 0.00 18.37 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-2-… 6 x SF4, 1 x FMN, 10 x PEE, 8 x PLX, 2 x 8Q1, 1 x NDP, 2 x UQ, 11 x CDL, 2 x FES, 1 x MG, 1 x ZN, 1 x ADP HHblits 0.27
5xtb.1.L
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Cryo-EM structure of human respiratory complex I matrix arm
 0.00 18.37 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x 8Q1, 1 x NDP, 2 x FES HHblits 0.26
6qcf.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Ovine respiratory complex I FRC open class 6
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 2 x FES, 1 x ZN, 1 x NDP, 2 x ZMP HHblits 0.26
6qc5.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Ovine respiratory complex I FRC closed class 1
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 2 x FES, 2 x 3PE, 1 x ZN, 1 x NDP, 2 x ZMP, 1 x PC1 HHblits 0.26
7zd6.1.4
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Complex I from Ovis aries, at pH7.4, Open state
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x PC1, 14 x 3PE, 1 x DCQ, 2 x ZMP, 1 x AMP, 1 x MYR, 6 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x K, 1 x ZN, 1 x NDP HHblits 0.26
7qsd.1.G
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Bovine complex I in the active state at 3.1 A
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 5 x PC1, 13 x 3PE, 6 x SF4, 2 x FES, 1 x FMN, 4 x CDL, 3 x LMT, 1 x GTP, 1 x MG, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.26
6zk9.1.C
NADH:ubiquinone oxidoreductase core subunit S1
Peripheral domain of open complex I during turnover
 0.00 16.33 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 1 x NAI, 2 x FES, 1 x K, 2 x PC1, 2 x 3PE, 1 x ZN, 1 x NDP, 1 x ZMP, 1 x CDL HHblits 0.26
7dgr.10.A
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Activity optimized supercomplex state2
 0.00 16.33 0.06 127-182 EM 0.00 monomer HHblits 0.26
5o31.1.8
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Mitochondrial complex I in the deactive state
 0.00 16.33 0.06 127-182 EM 4.13 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NAP, 1 x ZN HHblits 0.26
7tgh.58.A
NADH-ubiquinone oxidoreductase 75 kDa subunit
Cryo-EM structure of respiratory super-complex CI+III2 from Tetrahymena thermophila
 0.00 16.67 0.06 126-181 EM 0.00 monomer HHblits 0.27
6lod.1.B
Fe-S-cluster-containing hydrogenase components 1-like protein
Cryo-EM structure of the air-oxidized photosynthetic alternative complex III from Roseiflexus castenholzii
 0.00 14.89 0.06 755-812 EM 0.00 hetero-1-1-1-1-1-1-… 6 x HEC, 2 x EL6, 3 x SF4, 1 x F3S HHblits 0.29
3ir7.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-R94S
 0.00 29.55 0.05 754-812 X-ray 2.50 hetero-1-1-1-mer 2 x MD1, 4 x SF4, 1 x 6MO, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.33
3egw.1.A
Respiratory nitrate reductase 1 alpha chain
The crystal structure of the NarGHI mutant NarH - C16A
 0.00 29.55 0.05 754-812 X-ray 1.90 hetero-2-2-2-mer 2 x MD1, 2 x MGD, 2 x 6MO, 6 x SF4, 4 x F3S, 2 x 3PH, 4 x HEM, 2 x AGA HHblits 0.33
1r27.4.A
Respiratory nitrate reductase 1 alpha chain
Crystal Structure of NarGH complex
 0.00 29.55 0.05 754-812 X-ray 2.00 hetero-4-4-mer 4 x MO, 16 x SF4, 8 x MGD, 4 x F3S HHblits 0.33
3ir5.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49C
 0.00 29.55 0.05 754-812 X-ray 2.30 hetero-1-1-1-mer 2 x MD1, 1 x 6MO, 4 x SF4, 1 x AGA, 1 x F3S, 2 x HEM HHblits 0.33
1q16.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli
 0.00 29.55 0.05 754-812 X-ray 1.90 hetero-oligomer 2 x MD1, 1 x 6MO, 2 x HEM, 4 x SF4, 1 x F3S, 1 x AGA, 1 x 3PH HHblits 0.33
3ir6.1.A
Respiratory nitrate reductase 1 alpha chain
Crystal structure of NarGHI mutant NarG-H49S
 0.00 29.55 0.05 754-812 X-ray 2.80 hetero-1-1-1-mer 2 x GDP, 1 x AGA, 3 x SF4, 1 x F3S, 2 x HEM HHblits 0.33
7ar7.1.G
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation)
 0.00 14.89 0.06 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x UQ9, 3 x PTY, 2 x PC7, 1 x LMN, 1 x NDP, 2 x ZN, 2 x 8Q1, 1 x PGT, 1 x PSF, 1 x T7X HHblits 0.28
7aqr.1.F
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm)
 0.00 14.89 0.06 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x 8Q1 HHblits 0.28
7a23.1.O
75kDa
Plant mitochondrial respiratory complex I
 0.00 14.89 0.06 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 1 x FMN, 2 x T7X, 3 x CDL, 1 x U10, 1 x PEV, 2 x FES, 1 x NDP, 2 x ZN HHblits 0.28
7ar8.1.G
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation)
 0.00 14.89 0.06 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x UQ9, 3 x PTY, 2 x PC7, 1 x PGT, 1 x FE, 1 x NDP, 2 x ZN, 2 x 8Q1, 1 x LMN, 1 x PSF, 1 x T7X HHblits 0.28
6x89.1.H
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
Vigna radiata mitochondrial complex I*
 0.00 12.77 0.06 126-181 EM 0.00 hetero-1-1-1-1-1-1-… 1 x NAP, 6 x PC1, 6 x SF4, 2 x FES, 2 x ZN, 1 x FMN HHblits 0.27
8e73.55.A
NDUS1
Vigna radiata supercomplex I+III2 (full bridge)
 0.00 12.77 0.06 126-181 EM 0.00 monomer HHblits 0.27
1kqf.1.A
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT
FORMATE DEHYDROGENASE N FROM E. COLI
 0.01 14.89 0.06 127-174 X-ray 1.60 hetero-oligomer 3 x 6MO, 15 x SF4, 6 x MGD, 6 x HEM, 3 x CDL HHblits 0.26
6yj4.1.G
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Structure of Yarrowia lipolytica complex I at 2.7 A
 0.00 14.89 0.06 127-182 EM 0.00 hetero-1-1-1-1-1-1-… 18 x 3PE, 6 x SF4, 5 x LMT, 8 x PLC, 2 x FES, 1 x FMN, 6 x CDL, 1 x NDP, 1 x ZN, 2 x EHZ HHblits 0.26
6rfs.1.A
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Cryo-EM structure of a respiratory complex I mutant lacking NDUFS4
 0.00 14.89 0.06 127-182 EM 4.04 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x ZMP HHblits 0.26
6rfq.1.A
Subunit NUAM of NADH:Ubiquinone Oxidoreductase (Complex I)
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2
 0.00 14.89 0.06 127-182 EM 3.30 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 10 x 3PE, 2 x LMN, 4 x CDL, 2 x ZMP, 4 x PLC, 3 x T7X, 1 x CPL HHblits 0.26
6gcs.1.A
75-KDA PROTEIN (NUAM)
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica
 0.00 14.89 0.06 127-182 EM 4.32 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x ZMP, 1 x CDL, 3 x 3PE HHblits 0.26
1eu1.1.A
DIMETHYL SULFOXIDE REDUCTASE
THE CRYSTAL STRUCTURE OF RHODOBACTER SPHAEROIDES DIMETHYLSULFOXIDE REDUCTASE REVEALS TWO DISTINCT MOLYBDENUM COORDINATION ENVIRONMENTS.
 0.00 22.22 0.06 754-812 X-ray 1.30 monomer 3 x GLC, 1 x CD, 2 x MGD, 1 x 6MO, 2 x O HHblits 0.29
1h0h.1.A
FORMATE DEHYDROGENASE SUBUNIT ALPHA
Tungsten containing Formate Dehydrogenase from Desulfovibrio Gigas
 0.01 15.22 0.06 127-173 X-ray 1.80 hetero-1-1-mer 1 x W, 1 x 2MD, 1 x MGD, 4 x SF4, 1 x CA HHblits 0.27
1h0h.1.A
FORMATE DEHYDROGENASE SUBUNIT ALPHA
Tungsten containing Formate Dehydrogenase from Desulfovibrio Gigas
 0.00 16.28 0.05 754-812 X-ray 1.80 hetero-1-1-mer 1 x W, 1 x 2MD, 1 x MGD, 4 x SF4, 1 x CA HHblits 0.32
7arc.1.F
75 kDa
Cryo-EM structure of Polytomella Complex-I (peripheral arm)
 0.00 15.22 0.06 127-181 EM 0.00 hetero-1-1-1-1-1-1-… 6 x SF4, 2 x FES, 1 x FMN, 1 x NDP, 1 x ZN, 1 x 8Q1 HHblits 0.26
7zm7.1.I
NADH-ubiquinone oxidoreductase-like protein
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (inhibited by DDM)
 0.00 15.22 0.06 127-181 EM 0.00 hetero-1-1-1-1-1-1-… 4 x PC1, 14 x LMT, 5 x CDL, 8 x 3PE, 2 x FES, 6 x SF4, 1 x FMN, 1 x NDP, 1 x ZN, 2 x ZMP HHblits 0.25
1dms.1.A
DMSO REDUCTASE
STRUCTURE OF DMSO REDUCTASE
 0.00 15.56 0.06 754-812 X-ray 1.88 monomer 2 x PGD, 1 x 2MO HHblits 0.26
6s6y.1.B
Tungsten-containing formylmethanofuran dehydrogenase, subunit B
X-ray crystal structure of the formyltransferase/hydrolase complex (FhcABCD) from Methylorubrum extorquens in complex with methylofuran
 0.00 13.04 0.06 127-181 X-ray 3.10 hetero-2-2-2-2-mer 1 x MFN, 4 x ZN, 4 x CA, 4 x K, 3 x DGL, 2 x GLU, 1 x IAS HHblits 0.23
1eiw.1.A
HYPOTHETICAL PROTEIN MTH538
Solution structure of hypothetical protein MTH538 from Methanobacterium thermoautotrophicum
 0.00 11.36 0.05 125-168 NMR 0.00 monomer HHblits 0.27
7kqa.1.A
Iron dicitrate transport regulator FecR
Crystal Structure of Glucosamine-6-phosphate deanimase from Strenotrophomonas maltophilia
 0.00 33.33 0.05 146-184 X-ray 1.65 homo-dimer HHblits 0.32
7kqa.1.B
Iron dicitrate transport regulator FecR
Crystal Structure of Glucosamine-6-phosphate deanimase from Strenotrophomonas maltophilia
 0.00 33.33 0.05 146-184 X-ray 1.65 homo-dimer HHblits 0.32
8e9g.1.G
NADH-quinone oxidoreductase subunit G
Mycobacterial respiratory complex I with both quinone positions modelled
 0.00 9.30 0.05 754-812 EM 0.00 hetero-1-1-1-1-1-1-… HHblits 0.24
3fj1.1.A
putative phosphosugar isomerase
Crystal structure of putative phosphosugar isomerase (YP_167080.1) from SILICIBACTER POMEROYI DSS-3 at 1.75 A resolution
 0.00 17.50 0.05 146-185 X-ray 1.75 homo-dimer HHblits 0.29
1tzb.1.A
glucose-6-phosphate isomerase, conjectural
Crystal structure of native phosphoglucose/phosphomannose isomerase from Pyrobaculum aerophilum
 0.00 9.76 0.05 146-187 X-ray 1.16 homo-dimer HHblits 0.26
1tzb.1.B
glucose-6-phosphate isomerase, conjectural
Crystal structure of native phosphoglucose/phosphomannose isomerase from Pyrobaculum aerophilum
 0.00 9.76 0.05 146-187 X-ray 1.16 homo-dimer HHblits 0.26
3eua.1.A
PUTATIVE FRUCTOSE-AMINOACID-6-PHOSPHATE DEGLYCASE
CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHOSUGAR ISOMERASE (BSU32610) FROM BACILLUS SUBTILIS AT 1.90 A RESOLUTION
 0.00 25.64 0.05 146-184 X-ray 1.90 homo-dimer HHblits 0.29
2a3n.1.A
putative glucosamine-fructose-6-phosphate aminotransferase
Crystal structure of a putative glucosamine-fructose-6-phosphate aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.35 A resolution
 0.00 23.68 0.05 146-183 X-ray 1.23 homo-dimer HHblits 0.29
3knz.1.A
Putative sugar binding protein
Crystal structure of Putative sugar binding protein (NP_459565.1) from Salmonella typhimurium LT2 at 2.50 A resolution
 0.00 15.38 0.05 146-184 X-ray 2.50 homo-dimer 1 x ETX, 1 x IMD HHblits 0.26
2x48.1.A
CAG38821
ORF 55 from Sulfolobus islandicus rudivirus 1
 0.00 4.17 0.03 334-357 X-ray 2.60 monomer HHblits 0.27
2x48.2.A
CAG38821
ORF 55 from Sulfolobus islandicus rudivirus 1
 0.00 4.17 0.03 334-357 X-ray 2.60 monomer HHblits 0.27
2x48.3.A
CAG38821
ORF 55 from Sulfolobus islandicus rudivirus 1
 0.00 4.17 0.03 334-357 X-ray 2.60 monomer HHblits 0.27
1g8k.1.A
ARSENITE OXIDASE
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
 0.00 16.67 0.03 158-181 X-ray 1.64 hetero-1-1-mer 3 x HG, 2 x CA, 2 x MGD, 1 x O, 1 x 4MO, 1 x F3S, 1 x FES HHblits 0.24