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{"sheet":"BAU_TM8","index":0,"n_rows":70,"n_cols":3,"rows_kept":70,"merged":[[0,0,0,255],[4,0,31,0],[4,1,10,1],[11,1,18,1],[20,1,21,1],[22,1,23,1],[24,1,25,1],[26,1,31,1],[32,0,35,0],[36,0,37,0],[36,1,37,1],[40,0,41,0],[40,1,41,1],[42,0,52,0],[44,1,49,1],[58,0,67,0],[60,1,66,1],[68,0,69,0]],"flags":["formulas_cached_only"]}
["Supplementary Table S3: Potential virulence genes presented in the Citrobacter freundii BAU_TM8 genome based on the virulence factor database (VFDB)"]
[]
[]
["VF class","Virulence Factors","VFDB Genes"]
["Fimbrial adherence determinants","Agf/Csg","csgA"]
[null,null,"csgB"]
[null,null,"csgC"]
[null,null,"csgD"]
[null,null,"csgE"]
[null,null,"csgF"]
[null,null,"csgG"]
[null,"Fim","fimA"]
[null,null,"fimC"]
[null,null,"fimD"]
[null,null,"fimF"]
[null,null,"fimH"]
[null,null,"fimI"]
[null,null,"fimW"]
[null,null,"fimZ"]
[null,"Lpf","lpfC"]
[null,"Sta","staB"]
[null,null,"staC"]
[null,"Stc","stcB"]
[null,null,"stcC"]
[null,"Stg","stgA"]
[null,null,"stgB"]
[null,"Stk","stkA"]
[null,null,"stkB"]
[null,null,"stkC"]
[null,null,"stkD"]
[null,null,"stkE"]
[null,null,"stkF"]
["Nonfimbrial adherence determinants","MisL","misL"]
[null,"RatB","ratB"]
[null,"ShdA","shdA"]
[null,"SinH","sinH"]
["Regulation","PhoPQ","phoP"]
[null,null,"phoQ"]
["Secretion system","ACE T6SS","aec32"]
["Toxin","Colicin-like Usp","usp"]
["Acid resistance","Urease","ureB"]
[null,null,"ureG"]
["Adherence","E. coli common pilus (ECP)","ecpA"]
[null,"Flagella","fliQ"]
[null,"Lateral flagella","flgC"]
[null,null,"flgI"]
[null,null,"flgG"]
[null,null,"flgH"]
[null,null,"flhA"]
[null,null,"fliI"]
[null,"Polar flagella","fliP"]
[null,"Streptococcal plasmin receptor/GAPDH","plr/gapA"]
[null,"Type IV pili","pilW"]
["Antiphagocytosis","Capsule","uge"]
["Autotransporter","EhaB","ehaB"]
["Biofilm formation","PNAG (Polysaccharide poly-N-acetylglucosamine)","pgaC"]
["Immune evasion","LPS glucosylation","gtrB"]
["Invasion","Invasion of brain endothelial cells (Ibes)","ibeB"]
["Iron uptake","Enterobactin synthesis","entD"]
[null,"Heme transport","shuV"]
[null,"Heme uptake","chuA"]
[null,null,"chuS"]
[null,null,"chuT"]
[null,null,"chuU"]
[null,null,"chuW"]
[null,null,"chuX"]
[null,null,"chuY"]
[null,"Pyoverdine","pvdH"]
["Others","O-antigen","galE"]
[null,"VirK","virK"]