{"text_format":"3","workbook":"xlsx","n_sheets":8,"sheets":["Prevalence all","FDR Prev all","FDR ER+","FDR HER2+ ","FDR ER+HER2-","FDR ER+HER2+","FDR ER-HER2+","FDR ER-HER2-"],"not_rendered":{"defined_names":1},"read":"whole","date_system":"1900"}

{"sheet":"Prevalence all","index":0,"n_rows":298,"n_cols":16,"rows_kept":298}
["Prevalence all: Complete dataset of genes analysed by CGS (Foundation Medicine)"]
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["SOCS1",11988,2,{"v":1.6683350016683351E-4,"d":"0.02%"},822,0,{"v":0,"d":"0.00%"},15516,4,{"v":2.5779840164990978E-4,"d":"0.03%"},{"v":0,"d":"0.0000"},{"v":1,"d":"1.0000"},{"v":0,"d":"0.0000"},{"v":1,"d":"1.0000"},{"v":1.545384218669417,"d":"1.5454"},{"v":0.7026427307871201,"d":"0.7026"}]
["STAT3",11988,16,{"v":0.001334668001334668,"d":"0.13%"},822,1,{"v":0.00121654501216545,"d":"0.12%"},15516,14,{"v":9.0229440577468424E-4,"d":"0.09%"},{"v":0.9113885505481121,"d":"0.9114"},{"v":1,"d":"1.0000"},{"v":1.348703671480773,"d":"1.3487"},{"v":0.5391440141312386,"d":"0.5391"},{"v":0.675751515933428,"d":"0.6758"},{"v":0.3572507390008215,"d":"0.3573"}]
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{"sheet":"FDR Prev all","index":1,"n_rows":192,"n_cols":10,"rows_kept":192}
["Prevalence >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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["PIK3CA",{"v":0.3182349015682349,"d":"31.82%"},{"v":0.3017031630170317,"d":"30.17%"},{"v":0.3894044856921887,"d":"38.94%"},{"v":0.3330240932784406,"d":"3.3E-01"},{"v":0.4555349636600083,"d":"4.6E-01"},{"v":3.643417796655466E-7,"d":"3.6E-07"},{"v":3.7986776057793712E-6,"d":"3.8E-06"},{"v":2.142741865621383e-34,"d":"2.1E-34"},{"v":5.81601363525804e-33,"d":"5.8E-33"}]
["MYC",{"v":0.2112946279612946,"d":"21.13%"},{"v":0.2591240875912409,"d":"25.91%"},{"v":0.1720804331013148,"d":"17.21%"},{"v":1.545011985942155E-3,"d":"1.5E-03"},{"v":0.010486002702839043,"d":"1.0E-02"},{"v":1.1541856013632871E-9,"d":"1.2E-09"},{"v":2.1929526425902453E-8,"d":"2.2E-08"},{"v":2.35061280063463e-16,"d":"2.4E-16"},{"v":2.6271554830622333E-15,"d":"2.6E-15"}]
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["FGF4",{"v":0.1332999666333,"d":"13.33%"},{"v":0.1240875912408759,"d":"12.41%"},{"v":0.1994070636762052,"d":"19.94%"},{"v":0.4896258313557479,"d":"4.9E-01"},{"v":0.6176233869045614,"d":"6.2E-01"},{"v":3.2527156291450353E-8,"d":"3.3E-08"},{"v":4.4143997824111194E-7,"d":"4.4E-07"},{"v":3.498615005430655e-48,"d":"3.5E-48"},{"v":1.3294737020636488E-46,"d":"1.3E-46"}]
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["FGFR1",{"v":0.1196196196196196,"d":"11.96%"},{"v":0.1046228710462287,"d":"10.46%"},{"v":0.1569347770043826,"d":"15.69%"},{"v":0.2197963080468793,"d":"2.2E-01"},{"v":0.32778933907953034,"d":"3.3E-01"},{"v":2.9983769812727629E-5,"d":"3.0E-05"},{"v":1.9644538842821549E-4,"d":"2.0E-04"},{"v":6.920774920297695e-19,"d":"6.9E-19"},{"v":1.0957893623804684E-17,"d":"1.1E-17"}]
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["GATA3",{"v":0.08274941608274941,"d":"8.27%"},{"v":0.0851581508515815,"d":"8.52%"},{"v":0.1146558391337974,"d":"11.47%"},{"v":0.7937141342649314,"d":"7.9E-01"},{"v":0.8767772413391683,"d":"8.8E-01"},{"v":0.00923738724248856,"d":"9.2E-03"},{"v":0.025072908229611807,"d":"2.5E-02"},{"v":1.6082114245205E-18,"d":"1.6E-18"},{"v":2.350462851222269e-17,"d":"2.4E-17"}]
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{"sheet":"FDR ER+","index":2,"n_rows":181,"n_cols":10,"rows_kept":181}
["Prevalence of ER+ >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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{"sheet":"FDR HER2+ ","index":3,"n_rows":191,"n_cols":10,"rows_kept":191}
["Prevalence of HER2+ >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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{"sheet":"FDR ER+HER2-","index":4,"n_rows":182,"n_cols":10,"rows_kept":182}
["Prevalence of ER+/HER2- >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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{"sheet":"FDR ER+HER2+","index":5,"n_rows":167,"n_cols":10,"rows_kept":167}
["Prevalence of ER+/HER2+ >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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{"sheet":"FDR ER-HER2+","index":6,"n_rows":173,"n_cols":10,"rows_kept":173}
["Prevalence of ER-/HER2+ >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
["Gene","% var local","% var brain met","% var other met","pval brain met vs BC","Benjamini-Hochberg P-value BM vs BC","pval brain met vs other met","Benjamini-Hochberg P-value BM vs Other Met","pval other met vs BC","Benjamini-Hochberg P-value Other Met vs BC"]
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{"sheet":"FDR ER-HER2-","index":7,"n_rows":201,"n_cols":10,"rows_kept":201}
["Prevalence of ER-/HER2- >0.5%: Genes with prevalence more than 0.5% in any cohort and Benjamini-Hochberg p-value"]
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